BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047408
         (830 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score = 1202 bits (3110), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/845 (67%), Positives = 690/845 (81%), Gaps = 39/845 (4%)

Query: 3   IFMAKITTNFLFFSPPNQ-------SYGKKFASYKPSTLPIIVSSKSHSSCTINPISASI 55
           + ++K T N L+ SPP+Q       +Y   F  ++PS+   +VSS  + SC     S   
Sbjct: 2   LLISKTTPN-LWVSPPHQIHRENSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTSVLP 60

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDG 115
           S+T+ CK  +YN EI RFCE+GNL +AME++  S K  ++ +TYCS+LQLCADLKS++DG
Sbjct: 61  SETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDG 120

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           +++HSII +S  V  DGVLGSKLVFM+VTCGDL+EGRR+F+K+ N KVF+WNLLM+ Y+K
Sbjct: 121 RRIHSII-QSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAK 179

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSW 235
            GNF+ESL LFK+M+ LGI                    RRV+ A KLFDEL DRDV+SW
Sbjct: 180 IGNFRESLSLFKRMRELGI--------------------RRVESARKLFDELGDRDVISW 219

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N MISGY++NG++EKGL++F++ML LG N DLATMV+V++GC+N G L+ GRA+H +A+K
Sbjct: 220 NSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIK 279

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
           A F KE++ NN LLDMYSK G+L+ AI+VFE MGERSVVSWTSMIAGYAREG+ D ++RL
Sbjct: 280 ASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRL 339

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           F  M +EGI PD++ IT+ILHACAC GLLE GKDVH+YIKEN MQS L+VSNALMDMYAK
Sbjct: 340 FHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAK 399

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACIL 465
           CGSM DA SVF++M VKDIVSWNTMIG          AL+LFV M  N +P+ +TMACIL
Sbjct: 400 CGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACIL 459

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
           PACASLAALERG+EIHG+ILR+G S DR+VANA+VDMY+KCG L LAR LFDMIP KDL+
Sbjct: 460 PACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLV 519

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           SWT+MIAGYGMHG+G +AIA FN+MR +GIEPDEVSFIS+LYACSHSGL+DEGW FFNMM
Sbjct: 520 SWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMM 579

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
           R  C IEPK EHYAC+VDLL+R GNLS+AY+FI+MMP+ PDATIWG+LLCGCRI+H+VKL
Sbjct: 580 RNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKL 639

Query: 646 AEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
           AEKVAEHVFELEP+NTGYYVLLAN+YAEAEKWEEVKKLRE+I RRGL+KNPGCSWIEIKG
Sbjct: 640 AEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKG 699

Query: 706 KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEK 765
           KV+IFV G SSHP A KIE LLK+ R  MK EG+FPK RYALI AD+ EKE+ALCGHSEK
Sbjct: 700 KVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEK 759

Query: 766 LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCS 825
           +AMAFGIL+LP G+T+RVTKNLRVCGDCHEMAKFMSK  +R+I+LRDSNRFHHFKDG CS
Sbjct: 760 IAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCS 819

Query: 826 CRGFW 830
           CRG W
Sbjct: 820 CRGHW 824


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score = 1134 bits (2934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/836 (65%), Positives = 676/836 (80%), Gaps = 41/836 (4%)

Query: 5   MAKITTNFLFFSPP--NQSYGKKFAS-------YKPSTLPIIVSSKSHSSCTINPISASI 55
           MAK   N L FSP   NQ+  + F S       +KP++     S    SSC    ISA+ 
Sbjct: 1   MAKAAPN-LCFSPLTLNQNRKENFFSSQNGCFIHKPTSKATFFSP-IFSSCLPIRISATP 58

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDG 115
           ++T+  +  +YNA+I  FC++GNLE AME++   +KS+++TKTY S+LQLCA  KSL DG
Sbjct: 59  TRTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTYSSVLQLCAGSKSLTDG 118

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           KKVHSII  + + +D+ VLG KLV ++ TCGDLKEGRRVF+ ++   V++WN ++ EY+K
Sbjct: 119 KKVHSIIKSNNVAVDE-VLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSW 235
            G+FKES+ LFK M   GI                    +R + A +LFD+L DRDV+SW
Sbjct: 178 IGDFKESICLFKIMVEKGIEG------------------KRPESASELFDKLCDRDVISW 219

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N MISGY++NG+ E+GLE++K+M+ LG +VDLAT+++VL GCAN G L  G+AVH+ A+K
Sbjct: 220 NSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
           + F + I+F+NTLLDMYSKCGDLDGA+RVFEKMGER+VVSWTSMIAGY R+G  DGAIRL
Sbjct: 280 STFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRL 339

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
            + M +EG++ DV A TSILHACA  G L+ GKDVHDYIK N+M+S+L+V NALMDMY K
Sbjct: 340 LQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTK 399

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALE 475
           CGSM  A SVF+ M VKDI+SWNTMIG L          +PD  TMACILPACASL+ALE
Sbjct: 400 CGSMDGANSVFSTMVVKDIISWNTMIGEL----------KPDSRTMACILPACASLSALE 449

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
           RG+EIHGYILR+G S+DR+VANA+VD+YVKCGVL LAR LFDMIP+KDL+SWT+MI+GYG
Sbjct: 450 RGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYG 509

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
           MHG+G +AIATFN+MR AGIEPDEVSFIS+LYACSHSGL+++GWRFF +M+ + NIEPKL
Sbjct: 510 MHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKL 569

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           EHYACMVDLLSRTGNLS+AY FIE +P+APDATIWG+LLCGCRI+H+++LAEKVAE VFE
Sbjct: 570 EHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFE 629

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG-G 714
           LEP+NTGYYVLLAN+YAEAEKWEEVK++REKI ++GL+KNPGCSWIEIKGKVN+FV+G  
Sbjct: 630 LEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNN 689

Query: 715 SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
           SSHPH+KKIESLLK++R +MK EGYFPKT+YALINADEM+KE+ALCGHSEKLAMAFG+L 
Sbjct: 690 SSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLA 749

Query: 775 LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LP  +T+RVTKNLRVCGDCHEMAKFMSK  RREIVLRDSNRFHHFK+G CSCRGFW
Sbjct: 750 LPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score = 1127 bits (2915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/828 (64%), Positives = 652/828 (78%), Gaps = 51/828 (6%)

Query: 53  ASISKTLVCKTKNY-------NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQL 105
           +S++     +TK+Y       + +I  FCEVG+L+ AME+L SS+ S  D   YCSILQL
Sbjct: 100 SSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQL 159

Query: 106 CADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI 165
           CA+ KS+ DG++V SII  SG++ID G+LG KLVFM+V CGDLKEGR VF+K+   K+F+
Sbjct: 160 CAERKSIRDGRRVRSIIESSGVMID-GILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFL 218

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN------------ 213
           WNL++ EYS +GN+ ES+ LFK+M  LGI  +SYTFS +LKC A V              
Sbjct: 219 WNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLIC 278

Query: 214 --------------------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
                                R+V+ A KLFDEL+DRDV+SWN MISGY+ NG+ ++G+E
Sbjct: 279 KLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIE 338

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNTLLDMY 312
           +F +ML  G ++DLATMV V   CAN G L+ G+ +H++++KA    +E+ FNNTLLDMY
Sbjct: 339 IFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMY 398

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           SKCGDL+ AIRVFE+M E++VVSWTSMI GY REG+ DGAI+LF  M   G+ PDVYA+T
Sbjct: 399 SKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVT 458

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           SIL+ACA +G L+ GK VHDYI+EN+++++ +VSNAL DMYAKCGSM DA  VF+ M  K
Sbjct: 459 SILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKK 518

Query: 433 DIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHG 482
           D++SWNTMIG          AL LF  M +  +PDG T+ACILPACASLAAL++GREIHG
Sbjct: 519 DVISWNTMIGGYTKNSLPNEALTLFAEMQRESKPDGTTVACILPACASLAALDKGREIHG 578

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
           Y LR+G S D+ V NA+VDMYVKCG+LVLARSLFDMIP KDL+SWT+MIAGYGMHG+G +
Sbjct: 579 YALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSE 638

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
           AI TFN MR  GIEPDEVSFIS+LYACSHSGL+DEGW+ FN+M+ EC IEP LEHYACMV
Sbjct: 639 AINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMV 698

Query: 603 DLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTG 662
           DLL+RTGNL +A++FI+ MP+ PDATIWG+LLCGCRIHH+VKLAEKVAE +FELEP+NTG
Sbjct: 699 DLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTG 758

Query: 663 YYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKK 722
           YYVLLAN+YAEAEKWEEV+KLR+KI +RGLKKNPGCSWIEIKGK+NIFVAG  S P AKK
Sbjct: 759 YYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKK 818

Query: 723 IESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIR 782
           IE LLKRLR +MK EGY PKT YAL+NADE EKEVALCGHSEKLAMAFG+LNLP G+TIR
Sbjct: 819 IELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIR 878

Query: 783 VTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           VTKNLRVCGDCHEMAKFMSK+A REI+LRDS+RFHHFKDG CSCRG+W
Sbjct: 879 VTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score = 1127 bits (2914), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/836 (65%), Positives = 674/836 (80%), Gaps = 41/836 (4%)

Query: 5   MAKITTNFLFFSPP--NQSYGKKFAS-------YKPSTLPIIVSSKSHSSCTINPISASI 55
           MAK   N L FSP   NQ+  + F S       +KPS L   + S   SSC    ISA+ 
Sbjct: 1   MAKAAPN-LCFSPLTLNQNRKENFFSSQNGCFIHKPS-LKTKIFSPIFSSCIPIRISATP 58

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDG 115
           ++T+  +  +YNA+I  FC++G+LE AME++   +KS+++TKTY S+LQLCA LKS  DG
Sbjct: 59  TRTIDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETKTYGSVLQLCAGLKSFTDG 118

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           KKVHSII  + + +D G LG KLV  + TCGDLKEGRRVF+ ++   V++WN ++ EY+K
Sbjct: 119 KKVHSIIKSNSVGVD-GALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSW 235
            G+FKES+ LFK M   GI                    +R + A +LFD+L DRDV+SW
Sbjct: 178 IGDFKESICLFKIMVEKGIEG------------------KRPESAFELFDKLCDRDVISW 219

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N MISGY++NG+ E+GL ++K+M+ LG +VDLAT+++VL GCAN G L  G+AVH+ A+K
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
           + F + I+F+NTLLDMYSKCGDLDGA+RVFEKMGER+VVSWTSMIAGY R+G  DGAI+L
Sbjct: 280 SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKL 339

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
            + M +EG++ DV AITSILHACA  G L+ GKDVHDYIK N+M+S+L+V NALMDMYAK
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALE 475
           CGSM  A SVF+ M VKDI+SWNTMIG L          +PD  TMAC+LPACASL+ALE
Sbjct: 400 CGSMEAANSVFSTMVVKDIISWNTMIGEL----------KPDSRTMACVLPACASLSALE 449

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
           RG+EIHGYILR+G S+DR+VANA+VD+YVKCGVL LAR LFDMIP+KDL+SWT+MIAGYG
Sbjct: 450 RGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYG 509

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
           MHG+G +AIATFN+MR AGIEPDEVSFIS+LYACSHSGL+++GWRFF +M+ + NIEPKL
Sbjct: 510 MHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKL 569

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           EHYACMVDLLSRTGNLS+AY F+E +P+APDATIWG+LLCGCR +H+++LAEKVAE VFE
Sbjct: 570 EHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFE 629

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG-G 714
           LEP+NTGYYVLLAN+YAEAEKWEEVK+LREKI ++GL+KNPGCSWIEIKGKVN+FV+G  
Sbjct: 630 LEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNN 689

Query: 715 SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
           SSHPH+K IESLLK++R +MK EG+FPKT+YALINADEM+KE+ALCGHSEKLAMAFG+L 
Sbjct: 690 SSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLT 749

Query: 775 LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LP  +TIRVTKNLRVCGDCHEMAKFMSK  RREIVLRDSNRFHHFKDG CSCRGFW
Sbjct: 750 LPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score = 1123 bits (2905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 549/836 (65%), Positives = 673/836 (80%), Gaps = 41/836 (4%)

Query: 5   MAKITTNFLFFSPP--NQSYGKKFAS-------YKPSTLPIIVSSKSHSSCTINPISASI 55
           MAK   N L FSP   NQ+  + F S       +KPS L   + S   SSC    ISA+ 
Sbjct: 1   MAKAAPN-LCFSPLTLNQNRKENFFSSQNGCFIHKPS-LKTKIFSPIFSSCIPIRISATP 58

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDG 115
           ++T+  +  +YNA+I  FC++G+LE AME++   +KS+++TKTY S+LQLCA LKS  DG
Sbjct: 59  TRTIDHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETKTYSSVLQLCAGLKSFTDG 118

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           KKVHSII  + + +D+  LG KLV  + TCGDLKEGRRVF+ ++   V++WN ++ EY+K
Sbjct: 119 KKVHSIIKSNSVGVDEA-LGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSW 235
            G+FKES+ LFK M   GI                    +R + A +LFD+L DRDV+SW
Sbjct: 178 IGDFKESICLFKIMVEKGIEG------------------KRPESAFELFDKLCDRDVISW 219

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N MISGY++NG+ E+GL ++K+M+ LG +VDLAT+++VL GCAN G L  G+AVH+ A+K
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
           + F + I+F+NTLLDMYSKCGDLDGA+RVFEKMGER+VVSWTSMIAGY R+G  DGAI+L
Sbjct: 280 SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKL 339

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
            + M +EG++ DV AITSILHACA  G L+ GKDVHDYIK N+M+S+L+V NALMDMYAK
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALE 475
           CGSM  A SVF+ M VKDI+SWNTMIG L          +PD  TMAC+LPACASL+ALE
Sbjct: 400 CGSMEAANSVFSTMVVKDIISWNTMIGEL----------KPDSRTMACVLPACASLSALE 449

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
           RG+EIHGYILR+G S+DR+VANA+VD+YVKCGVL LAR LFDMIP+KDL+SWT+MIAGYG
Sbjct: 450 RGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYG 509

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
           MHG+G +AIATFN+MR AGIEPDEVSFIS+LYACSHSGL+++GWRFF +M+ + NIEPKL
Sbjct: 510 MHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKL 569

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           EHYACMVDLLSRTGNLS+AY FIE +P+APDATIWG+LLCGCR +H+++LAEKVAE VFE
Sbjct: 570 EHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFE 629

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG-G 714
           LEP+N+GYYVLLAN+YAEAEKWEEVK+LREKI ++GL+KNPGCSWIEIKGKVN+FV+G  
Sbjct: 630 LEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNN 689

Query: 715 SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
           SSHPH+K IESLLK++R +MK EG+FPKT+YALINADEM+KE+ALCGHSEKLAMAFG+L 
Sbjct: 690 SSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLT 749

Query: 775 LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LP  +TIRVTKNLRVCGDCHEMAKFMSK  RREIVLRD NRFHHFKDG CSCRGFW
Sbjct: 750 LPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score = 1123 bits (2904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/836 (65%), Positives = 673/836 (80%), Gaps = 41/836 (4%)

Query: 5   MAKITTNFLFFSPP--NQSYGKKFAS-------YKPSTLPIIVSSKSHSSCTINPISASI 55
           MAK   N L FSP   NQ+  + F S       +KPS L     S    SC    ISA+ 
Sbjct: 1   MAKAAPN-LCFSPLTLNQNRKENFFSSQNGCFIHKPS-LKTTFFSPIFRSCIPVRISATP 58

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDG 115
           ++T+  +  +YNA+I  FC++G+LE AME++   +KS+++TKTY S+LQLCA LKSL DG
Sbjct: 59  TRTIDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETKTYGSVLQLCAGLKSLTDG 118

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           KKVHSII  + + +D+  LG KLV  + TCGDLKEGRRVF+ ++   V++WN ++ EY+K
Sbjct: 119 KKVHSIIKSNSVGVDEA-LGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSW 235
            G+FKES+ LFK M   GI                    +R + A +LFD+L DRDV+SW
Sbjct: 178 IGDFKESICLFKIMVEKGIEG------------------KRPESASELFDKLCDRDVISW 219

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N MISGY++NG+ E+GL ++K+M+ LG +VDLAT+++VL GCAN G L  G+AVH+ A+K
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
           + F + I+F+NTLLDMYSKCGDLDGA+RVFEKMGER+VVSWTSMIAGY R+G  DGAI L
Sbjct: 280 SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIIL 339

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
            + M +EG++ DV AITSILHACA  G L+ GKDVHDYIK N+M S+L+V NALMDMYAK
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAK 399

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALE 475
           CGSM  A SVF+ M VKDI+SWNTM+G L          +PD  TMACILPACASL+ALE
Sbjct: 400 CGSMEGANSVFSTMVVKDIISWNTMVGEL----------KPDSRTMACILPACASLSALE 449

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
           RG+EIHGYILR+G S+DR+VANA+VD+YVKCGVL LAR LFDMIP+KDL+SWT+MIAGYG
Sbjct: 450 RGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYG 509

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
           MHG+G +AIATFN+MR AGIEPDEVSFIS+LYACSHSGL+++GWRFF +M+ + NIEPKL
Sbjct: 510 MHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKL 569

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           EHYACMVDLLSRTGNLS+AY+FIE +P+APDATIWG+LLCGCRI+H+++LAEKVAE VFE
Sbjct: 570 EHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFE 629

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG-G 714
           LEP+NTGYYVLLAN+YAEAEK EEVK++REKI ++GL+KNPGCSWIEIKG+VN+FV+G  
Sbjct: 630 LEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNN 689

Query: 715 SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
           SSHPH+KKIESLLK++R +MK EGYFPKT+YALINADEM+KE+ALCGHSEKLAMAFG+L 
Sbjct: 690 SSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLT 749

Query: 775 LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LP  +TIRVTKNLRVCGDCHEMAKFMSK  RREIVLRDSNRFHHFKDG CSCRGFW
Sbjct: 750 LPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score = 1098 bits (2841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/876 (62%), Positives = 658/876 (75%), Gaps = 49/876 (5%)

Query: 1    MQIFMAKITTNFLFFSPPNQSYGKKFASY-KPSTLPIIVSSKSHSSCTINPISASISKTL 59
            M + MAK  TNF  +S  N    +  A+Y KP    I     S      + +    S T 
Sbjct: 355  MLLTMAKSITNFGTYSTCNCHTSE--ANYAKPRNCFIFFQQPSRKYFLSSYLDVPRSSTR 412

Query: 60   VCKTK--NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKK 117
            V      + N +I +FCEVG+L  A+E+L  S+KS++D   Y SILQLCA+ K L++GK 
Sbjct: 413  VGAFAKLDENTKICKFCEVGDLRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKM 472

Query: 118  VHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFIWNLLMHEYSKT 176
            VHS+I  +GI I+ GVLG+KLVFM+V+CG L+EGRR+F+ I  + KVF+WNL+M EY+K 
Sbjct: 473  VHSVISSNGIPIE-GVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKI 531

Query: 177  GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------------------------ 212
            G+++ES+YLFKKMQ LGI  +SYTFSC+LKC A +G                        
Sbjct: 532  GDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVV 591

Query: 213  --------NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                     S  V  AHKLFDEL DRDVVSWN MISG + NG +   LE F +ML L   
Sbjct: 592  NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG 651

Query: 265  VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            VDLAT+V  ++ CAN G+L  GRA+H   +KACFS+E+ FNNTLLDMYSKCG+L+ AI+ 
Sbjct: 652  VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711

Query: 325  FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
            FEKMG+++VVSWTS+IA Y REG++D AIRLF  M  +G+ PDVY++TS+LHACAC   L
Sbjct: 712  FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771

Query: 385  EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
            + G+DVH+YI++N+M   L VSNALMDMYAKCGSM +A  VF+Q+PVKDIVSWNTMIG  
Sbjct: 772  DKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGY 831

Query: 443  --------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                    AL LF  M +   PDG+TMAC+LPAC SLAALE GR IHG ILR+G S++ +
Sbjct: 832  SKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELH 891

Query: 495  VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
            VANA++DMYVKCG LV AR LFDMIP KDLI+WT+MI+G GMHG G +AIATF  MR AG
Sbjct: 892  VANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAG 951

Query: 555  IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
            I+PDE++F S+LYACSHSGL++EGW FFN M  ECN+EPKLEHYACMVDLL+RTGNLS+A
Sbjct: 952  IKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKA 1011

Query: 615  YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
            Y  IE MP+ PDATIWG+LLCGCRIHH+V+LAEKVAEHVFELEPDN GYYVLLAN+YAEA
Sbjct: 1012 YNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEA 1071

Query: 675  EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            EKWEEVKKLRE+I +RGLKK+PGCSWIE++GK   FV+  ++HP AK I SLL  LR++M
Sbjct: 1072 EKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKM 1131

Query: 735  KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
            K EG+ PK RYALINA +MEKEVALCGHSEKLAMAFGILNLP+G+TIRV KNLRVC DCH
Sbjct: 1132 KNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCH 1191

Query: 795  EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            EMAKFMSKT RREI+LRDSNRFHHFKDG CSCR FW
Sbjct: 1192 EMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score = 1075 bits (2779), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/827 (61%), Positives = 636/827 (76%), Gaps = 46/827 (5%)

Query: 43   HSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSI 102
            HS+  ++P   S + T    T+N NA+I +FCE+G+L  A+E+L  S+  ++   +YCS+
Sbjct: 319  HSTVCVSP---SFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCSV 375

Query: 103  LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
            LQLCA+ KSLEDGK+VHS+I  +GI ID+  LG+KLVFM+V CGDL +GR++F+KI N K
Sbjct: 376  LQLCAEKKSLEDGKRVHSVIISNGISIDEA-LGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434

Query: 163  VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------ 216
            VF+WNLLM EY+K GNF+ES+ LFKKMQ LG+  + YTF+CVLKC A +G  +       
Sbjct: 435  VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494

Query: 217  --------------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
                                      V+ AH LFDELS+ DVVSWN MI+G + NG +  
Sbjct: 495  YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 554

Query: 251  GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            GLE+F +ML LG  VDL T+V+VL   AN G L  GRA+H F +KACFS+E+ F+NTLLD
Sbjct: 555  GLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 614

Query: 311  MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
            MYSKCG+L+GA  VF KMG+ ++VSWTS IA Y REG++  AI LF  M  +G+ PD+Y 
Sbjct: 615  MYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 674

Query: 371  ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
            +TSI+HACAC   L+ G+DVH Y+ +N M S+L V+NAL++MYAKCGS+ +A  VF+++P
Sbjct: 675  VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP 734

Query: 431  VKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREI 480
            VKDIVSWNTMIG          AL+LF+ M + F+PD +TMAC+LPACA LAAL++GREI
Sbjct: 735  VKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREI 794

Query: 481  HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
            HG+ILR G  +D +VA A+VDMY KCG+LVLA+ LFDMIP KDLISWT+MIAGYGMHGFG
Sbjct: 795  HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 854

Query: 541  CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
             +AI+TFN+MR AGIEPDE SF  +L ACSHSGL++EGW+FFN MR EC +EPKLEHYAC
Sbjct: 855  NEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC 914

Query: 601  MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
            +VDLL+R GNLS+AY+FIE MP+ PD TIWG LL GCRIHH+VKLAEKVAEH+FELEPDN
Sbjct: 915  VVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDN 974

Query: 661  TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
            T YYV+LANVYAEAEKWEEVKKLR+++ +RG K+NPGCSWIE+ GK NIFVAG S HP A
Sbjct: 975  TRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQA 1034

Query: 721  KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
            K+I+ LL++L ++M+ E YF   RY LIN D+MEKE+  CGHSEK AMAFGILNLP G+T
Sbjct: 1035 KRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRT 1094

Query: 781  IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
            +RV+KN RVCGDCHEM KFMSKT +REIVLRDSNRFHHFKDG CSCR
Sbjct: 1095 VRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCR 1141


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score = 1074 bits (2777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/827 (61%), Positives = 636/827 (76%), Gaps = 46/827 (5%)

Query: 43  HSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSI 102
           HS+  ++P   S + T    T+N NA+I +FCE+G+L  A+E+L  S+  ++   +YCS+
Sbjct: 44  HSTVCVSP---SFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCSV 100

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           LQLCA+ KSLEDGK+VHS+I  +GI +D+  LG+KLVFM+V CGDL +GR++F+KI N K
Sbjct: 101 LQLCAEKKSLEDGKRVHSVIISNGISVDEA-LGAKLVFMYVNCGDLVQGRKIFDKIMNDK 159

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------ 216
           VF+WNLLM EY+K GNF+ES+ LFKKMQ LG+  + YTF+CVLKC A +G  +       
Sbjct: 160 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 219

Query: 217 --------------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
                                     V+ AH LFDELS+ DVVSWN MI+G + NG +  
Sbjct: 220 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 279

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
           GLE+F +ML LG  VDL T+V+VL  CAN G L  GRA+H F +KACFS+E+ F+NTLLD
Sbjct: 280 GLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 339

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MYSKCG+L+GA  VF KMG+ ++VSWTS+IA Y REG++  AI LF  M  +G+ PD+Y 
Sbjct: 340 MYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 399

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           +TSI+HACAC   L+ G+DVH Y+ +N M S+L V+NAL++MYAKCGS+ +A  VF+++P
Sbjct: 400 VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP 459

Query: 431 VKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREI 480
           VKDIVSWNTMIG          AL+LF+ M + F+PD +TMAC+LPACA LAAL++GREI
Sbjct: 460 VKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREI 519

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           HG+ILR G  +D +VA A+VDMY KCG+LVLA+ LFDMIP KDLISWT+MIAGYGMHGFG
Sbjct: 520 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 579

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
            +AI+TFN+MR AGIEPDE SF ++L ACSHSGL++EGW+FFN MR EC +EPKLEHYAC
Sbjct: 580 NEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC 639

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           +VDLL+R GNLS+AY+FIE MP+ PD TIWG LL GCRIHH+VKLAEKVAEH+FELEPDN
Sbjct: 640 VVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDN 699

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
           T YYV+LANVYAEAEKWEEVKKLR+++ +RG K+NPGCSWIE+ GK NIFVAG S HP A
Sbjct: 700 TRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQA 759

Query: 721 KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
           KKI+ LL +L ++M+ E Y    RY LIN D+MEKE+  CGHSEK AMAFGILNLP G+T
Sbjct: 760 KKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRT 819

Query: 781 IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
           +RV+KN RVCGDCHEM KFMSKT + EIVLRDSNRFHHFKDG CSCR
Sbjct: 820 VRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCR 866


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score = 1053 bits (2724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/828 (62%), Positives = 637/828 (76%), Gaps = 46/828 (5%)

Query: 47  TINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLC 106
           T++  + SI+ T      + N ++ RFCE GNL+ A+++L+ S K  ID +T CS+LQLC
Sbjct: 46  TVSDRADSIT-TFDRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPRTLCSVLQLC 104

Query: 107 ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIW 166
           AD KSL+DGK+V + I  +G V+D   LGSKL  M+  CGDLKE  RVF+++   K   W
Sbjct: 105 ADSKSLKDGKEVDNFIRGNGFVLDSN-LGSKLALMYTNCGDLKEASRVFDQVKIEKALFW 163

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV---------------- 210
           N+LM+E +K+G+F  S+ LFKKM S G+  DSYTFSCV K  +                 
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILK 223

Query: 211 --------VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                   VGNS         RV  A K+FDE+++RDV+SWN +I+GY++NG+AEKGL V
Sbjct: 224 SGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
           F +ML  G  +DLAT+V+V +GCA+   +  GRAVH F +KACFS+E  F NTLLDMYSK
Sbjct: 284 FVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSK 343

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
           CGDLD A  VF +M  RSVVS+TSMIAGYAREG+   A++LF  M  EGI PDVY +T++
Sbjct: 344 CGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L+ CA + LL+ GK VH++IKENDM   ++VSNALMDMYAKCGSM +AE VF++M VKDI
Sbjct: 404 LNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDI 463

Query: 435 VSWNTMIG----------ALDLFVAML--QNFEPDGVTMACILPACASLAALERGREIHG 482
           +SWNT+IG          AL LF  +L  + F PD  T+AC+LPACASL+A ++GREIHG
Sbjct: 464 ISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHG 523

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
           YI+R+G  +DR+VAN++VDMY KCG L+LAR LFD I +KDL+SWT+MIAGYGMHGFG +
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKE 583

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
           AIA FN MRQAGIEPDE+SF+S+LYACSHSGLVDEGWRFFN+MR+EC IEP +EHYAC+V
Sbjct: 584 AIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643

Query: 603 DLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTG 662
           D+L+RTGNLS+AYRFIE MP+ PDATIWG+LLCGCRIHH+VKLAE+VAE VFELEP+NTG
Sbjct: 644 DMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTG 703

Query: 663 YYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKK 722
           YYVL+AN+YAEAEKWEEVK+LR++I +RGL+KNPGCSWIEIKG+VNIFVAG SS+P  +K
Sbjct: 704 YYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEK 763

Query: 723 IESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIR 782
           IE+ L+ +R  M  EGY P T+YALI+A+EMEKE ALCGHSEKLAMA GI++   G+ IR
Sbjct: 764 IEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIR 823

Query: 783 VTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           VTKNLRVCGDCHEMAKFMSK  RREIVLRDSNRFH FKDG CSCRGFW
Sbjct: 824 VTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score = 1043 bits (2696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/808 (62%), Positives = 625/808 (77%), Gaps = 45/808 (5%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           N ++ RFCE GNLE A+++L  S K  ID +T CS+LQLCAD KSL+DGK+V + I  +G
Sbjct: 65  NTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNG 124

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
            VID   LGSKL  M+  CGDLKE  RVF+++   K   WN+LM+E +K+G+F  S+ LF
Sbjct: 125 FVIDSN-LGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183

Query: 187 KKMQSLGIAADSYTFSCVLKCLAV------------------------VGNS-------- 214
           KKM S G+  DSYTFSCV K  +                         VGNS        
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           +RV  A K+FDE+++RDV+SWN +I+GY++NG+AEKGL VF +ML  G  +DLAT+V+V 
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           +GCA+   +  GRAVH+  +KACFS+E  F NTLLDMYSKCGDLD A  VF +M +RSVV
Sbjct: 304 AGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV 363

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           S+TSMIAGYAREG+   A++LF  M  EGI PDVY +T++L+ CA   LL+ GK VH++I
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
           KEND+   ++VSNALMDMYAKCGSM +AE VF++M VKDI+SWNT+IG          AL
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 483

Query: 445 DLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
            LF  +L+   F PD  T+AC+LPACASL+A ++GREIHGYI+R+G  +DR+VAN++VDM
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG L+LA  LFD I +KDL+SWT+MIAGYGMHGFG +AIA FN MRQAGIE DE+SF
Sbjct: 544 YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 603

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           +S+LYACSHSGLVDEGWRFFN+MR+EC IEP +EHYAC+VD+L+RTG+L +AYRFIE MP
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP 663

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + PDATIWG+LLCGCRIHH+VKLAEKVAE VFELEP+NTGYYVL+AN+YAEAEKWE+VK+
Sbjct: 664 IPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKR 723

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           LR++I +RGL+KNPGCSWIEIKG+VNIFVAG SS+P  + IE+ L+++R  M  EGY P 
Sbjct: 724 LRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPL 783

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           T+YALI+A+EMEKE ALCGHSEKLAMA GI++   G+ IRVTKNLRVCGDCHEMAKFMSK
Sbjct: 784 TKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSK 843

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
             RREIVLRDSNRFH FKDG CSCRGFW
Sbjct: 844 LTRREIVLRDSNRFHQFKDGHCSCRGFW 871


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score = 1036 bits (2679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/695 (70%), Positives = 586/695 (84%), Gaps = 29/695 (4%)

Query: 137 KLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA 196
           KLV  + TCGDLKEGRRVF+ ++   V++WN ++ EY+K G+FKES+ LFK M   GI  
Sbjct: 1   KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
                             +R + A +LFD+L DRDV+SWN MISGY++NG+ E+GL ++K
Sbjct: 61  ------------------KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 102

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
           +M+ LG +VDLAT+++VL GCA  G L  G+AVH+ A+K+ F + I+F+NTLLDMYSKCG
Sbjct: 103 QMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 162

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
           DLDGA+RVFEKMGER+VVSWTSMIAGY R+G  DGAI L + M +EG++ DV AITSILH
Sbjct: 163 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILH 222

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
           ACA  G L+ GKDVHDYIK N+M S+L+V NALMDMYAKCGSM  A SVF+ M VKDI+S
Sbjct: 223 ACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIIS 282

Query: 437 WNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
           WNTM+G L          +PD  TMACILPACASL+ALERG+EIHGYILR+G S+DR+VA
Sbjct: 283 WNTMVGEL----------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVA 332

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           NA+VD+YVKCGVL LAR LFDMIP+KDL+SWT+MIAGYGMHG+G +AIATFN+MR AGIE
Sbjct: 333 NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 392

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           PDEVSFIS+LYACSHSGL+++GWRFF +M+ + NIEPKLEHYACMVDLLSRTGNLS+AY+
Sbjct: 393 PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYK 452

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
           FIE +P+APDATIWG+LLCGCRI+H+++LAEKVAE VFELEP+NTGYYVLLAN+YAEAEK
Sbjct: 453 FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 512

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG-GSSHPHAKKIESLLKRLRLEMK 735
           WEEVK++REKI ++GL+KNPGCSWIEIKG+VN+FV+G  SSHPH+KKIESLLK++R +MK
Sbjct: 513 WEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 572

Query: 736 REGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHE 795
            EGYFPKT+YALINADEM+KE+ALCGHSEKLAMAFG+L LP  +TIRVTKNLRVCGDCHE
Sbjct: 573 EEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHE 632

Query: 796 MAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           MAKFMSK  RREIVLRDSNRFHHFKDG CSCRGFW
Sbjct: 633 MAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 173/365 (47%), Gaps = 22/365 (6%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D  T  S+L  CA   +L  GK VHS+  +S          + L+ M+  CGDL    R
Sbjct: 111 VDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRIN-FSNTLLDMYSKCGDLDGALR 169

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VF K+    V  W  ++  Y++ G    ++ L ++M+  G+  D    + +L   A  G+
Sbjct: 170 VFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGS 229

Query: 214 SRRVKDAHKLFDELSDRDVVS----WNCMISGYIANGVAEKGLEVFKEMLN---LGFNV- 265
               KD H   D +   ++ S     N ++  Y   G  E    VF  M+    + +N  
Sbjct: 230 LDNGKDVH---DYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTM 286

Query: 266 ------DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
                 D  TM  +L  CA+  AL  G+ +H + L+  +S +    N L+D+Y KCG L 
Sbjct: 287 VGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 346

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A  +F+ +  + +VSWT MIAGY   G  + AI  F  M   GIEPD  +  SIL+AC+
Sbjct: 347 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 406

Query: 380 CDGLLEIGKDVHDYIKEND--MQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVS 436
             GLLE G     YI +ND  ++  L     ++D+ ++ G+++ A      +P+  D   
Sbjct: 407 HSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATI 465

Query: 437 WNTMI 441
           W  ++
Sbjct: 466 WGALL 470



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 123/300 (41%), Gaps = 59/300 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ + I  +   G  + A+ +L   EK   K+D     SIL  CA   SL++GK VH  I
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             + +  +  V  + L+ M+  CG ++    VF+ +    +  WN ++ E          
Sbjct: 241 KANNMASNLFVCNA-LMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE---------- 289

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK-------------------- 222
                      +  DS T +C+L   A +    R K+ H                     
Sbjct: 290 -----------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDL 338

Query: 223 ------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                       LFD +  +D+VSW  MI+GY  +G   + +  F EM + G   D  + 
Sbjct: 339 YVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 398

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN--TLLDMYSKCGDLDGAIRVFEKM 328
           +++L  C++ G L  G     + +K  F+ E    +   ++D+ S+ G+L  A +  E +
Sbjct: 399 ISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETL 457


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  952 bits (2462), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/761 (61%), Positives = 580/761 (76%), Gaps = 44/761 (5%)

Query: 51  ISASISKTLVCK-TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADL 109
           +SA++S+T     T + NA+I +FCE+G+L  AM++L  S++S+++  TYCS+LQLCA+L
Sbjct: 11  VSATLSETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELNTYCSVLQLCAEL 70

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLL 169
           KSLEDGK+VHSII  +G+ ID+ VLG+KLVFM+V CGDL +GRR+F+ I N K+F+WNLL
Sbjct: 71  KSLEDGKRVHSIISSNGMAIDE-VLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLL 129

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK------- 222
           M EY+K GN++ES+ LF+KMQ LGI  DSYTF+CVLK  A     R  K  H        
Sbjct: 130 MSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGF 189

Query: 223 -------------------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                                    LFDELSDRDVVSWN MISG   NG +  GLE F +
Sbjct: 190 GSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQ 249

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           MLNLG +VD AT+V VL  CAN G L  GRA+HA+ +KA FS  + FNNTLLDMYSKCG+
Sbjct: 250 MLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGN 309

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           L+GA  VF KMGE ++VSWTS+IA + REG+   AI LF  M  +G+ PD+YA+TS++HA
Sbjct: 310 LNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHA 369

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           CAC   L+ G++VH++IK+N+M S+L VSNALM+MYAKCGSM +A  +F+Q+PVK+IVSW
Sbjct: 370 CACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSW 429

Query: 438 NTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRH 487
           NTMIG          AL LF+ M +  +PD VTMAC+LPACA LAALE+GREIHG+ILR 
Sbjct: 430 NTMIGGYSQNSLPNEALQLFLDMQKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRK 489

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           G  +D +VA A+VDMYVKCG+LVLA+ LFDMIP KD+I WT+MIAGYGMHGFG +AI+TF
Sbjct: 490 GYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTF 549

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
             MR AGIEP+E SF S+LYAC+HSGL+ EGW+ F+ M+ ECNIEPKLEHYACMVDLL R
Sbjct: 550 EKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIR 609

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
           +GNLS AY+FIE MP+ PDA IWG+LL GCRIHH+V+LAEKVAEH+FELEP+NT YYVLL
Sbjct: 610 SGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLL 669

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLL 727
           ANVYAEAEKWEEVKK++ +IS+ GLK + GCSWIE++GK NIF AG +SHP AK I+SLL
Sbjct: 670 ANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLL 729

Query: 728 KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
           ++L ++M R GY  K +YALINAD+  KEV LC HSEKLAM
Sbjct: 730 RKLTMKMNRGGYSNKIKYALINADDRLKEVLLCAHSEKLAM 770


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  949 bits (2453), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/720 (63%), Positives = 563/720 (78%), Gaps = 44/720 (6%)

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV---- 210
           F+++   K   WN+LM+E +K+G+F  S+ LFKKM S G+  DSYTFSCV K  +     
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 211 --------------------VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGY 242
                               VGNS        +RV  A K+FDE+++RDV+SWN +I+GY
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           ++NG+AEKGL VF +ML  G  +DLAT+V+V +GCA+   +  GRAVH+  +KACFS+E 
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
            F NTLLDMYSKCGDLD A  VF +M +RSVVS+TSMIAGYAREG+   A++LF  M  E
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           GI PDVY +T++L+ CA   LL+ GK VH++IKEND+   ++VSNALMDMYAKCGSM +A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN--FEPDGVTMACILPACAS 470
           E VF++M VKDI+SWNT+IG          AL LF  +L+   F PD  T+AC+LPACAS
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           L+A ++GREIHGYI+R+G  +DR+VAN++VDMY KCG L+LA  LFD I +KDL+SWT+M
Sbjct: 361 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 420

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           IAGYGMHGFG +AIA FN MRQAGIE DE+SF+S+LYACSHSGLVDEGWRFFN+MR+EC 
Sbjct: 421 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 480

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           IEP +EHYAC+VD+L+RTG+L +AYRFIE MP+ PDATIWG+LLCGCRIHH+VKLAEKVA
Sbjct: 481 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVA 540

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
           E VFELEP+NTGYYVL+AN+YAEAEKWE+VK+LR++I +RGL+KNPGCSWIEIKG+VNIF
Sbjct: 541 EKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIF 600

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
           VAG SS+P  + IE+ L+++R  M  EGY P T+YALI+A+EMEKE ALCGHSEKLAMA 
Sbjct: 601 VAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMAL 660

Query: 771 GILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           GI++   G+ IRVTKNLRVCGDCHEMAKFMSK  RREIVLRDSNRFH FKDG CSCRGFW
Sbjct: 661 GIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 253/528 (47%), Gaps = 66/528 (12%)

Query: 60  VCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVH 119
           + K+ +++  IG F      +K M     S   ++D+ T+  + +  + L+S+  G+++H
Sbjct: 19  LAKSGDFSGSIGLF------KKMM-----SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 67

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
             I +SG    + V G+ LV  ++    +   R+VF+++    V  WN +++ Y   G  
Sbjct: 68  GFILKSGFGERNSV-GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 126

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK--------------------- 218
           ++ L +F +M   GI  D    + ++   A   +SR +                      
Sbjct: 127 EKGLSVFVQMLVSGIEID---LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 183

Query: 219 --------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                          A  +F E+SDR VVS+  MI+GY   G+A + +++F+EM   G +
Sbjct: 184 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 243

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D+ T+  VL+ CA    L  G+ VH +  +     +I  +N L+DMY+KCG +  A  V
Sbjct: 244 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 303

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGL 383
           F +M  + ++SW ++I GY++    + A+ LF  ++ E    PD   +  +L ACA    
Sbjct: 304 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 363

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
            + G+++H YI  N   S  +V+N+L+DMYAKCG++  A  +F+ +  KD+VSW  MI  
Sbjct: 364 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 423

Query: 443 ---------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    A+ LF  M Q   E D ++   +L AC+    ++ G      I+RH    +
Sbjct: 424 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN-IMRHECKIE 482

Query: 493 RNVAN--AIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
             V +   IVDM  + G L+ A    + +P   D   W  ++ G  +H
Sbjct: 483 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 530


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  911 bits (2354), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/571 (74%), Positives = 492/571 (86%), Gaps = 10/571 (1%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           MV++L  CANCG +  GRAVH   +KAC   + +F NTLLDMY+KCG LDGAI VF+ M 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            R+VV+WTS+IA YAREG+ D AIRLF  M REG+ PD++ IT++LHACAC+G LE GKD
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           VH+YI+ENDMQS+++V NALMDMYAKCGSM DA SVF +MPVKDI+SWNTMIG       
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 443 ---ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
              AL LF  M+   +PDG T+ACILPACASLA+L+RG+E+HG+ILR+G  +D+ VANA+
Sbjct: 181 PNEALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANAL 240

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMYVKCGV VLAR LFDMIP KDLI+WT+MIAGYGMHGFG +AI TFN+MRQAGIEPDE
Sbjct: 241 VDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDE 300

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           VSFIS+LYACSHSGL+DEGWRFFN+M+ ECN++PKLEHYAC+VDLL+R+G L+ AY+FI+
Sbjct: 301 VSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIK 360

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP+ PDATIWG+LL GCRIHH+VKLAEKVAEHVFELEP+NTGYYVLLAN YAEAEKWEE
Sbjct: 361 SMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEE 420

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           VKKLR+KI RRGLKKNPGCSWIE+K KV+IF+AG SSHP AKKIE LLKRLR +MK EGY
Sbjct: 421 VKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGY 480

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
           FPKTRYALINAD ++KE ALCGHSEKLAMAFGILNLP  +TIRV+KNLRVCGDCHEMAKF
Sbjct: 481 FPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKF 540

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +SKT  REIVLRDSNRFHHFKDG C CRGFW
Sbjct: 541 ISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 170/328 (51%), Gaps = 14/328 (4%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +FD +S R VV+W  +I+ Y   G++++ + +F EM   G + D+ T+ TVL  CA  G+
Sbjct: 55  VFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGS 114

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G+ VH +  +      I   N L+DMY+KCG ++ A  VF +M  + ++SW +MI G
Sbjct: 115 LENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGG 174

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           Y++  + + A+ LF  MV E ++PD   +  IL ACA    L+ GK+VH +I  N   S 
Sbjct: 175 YSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSD 233

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ 452
             V+NAL+DMY KCG    A  +F+ +P KD+++W  MI           A+  F  M Q
Sbjct: 234 QQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQ 293

Query: 453 -NFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIVDMYVKCGVLV 510
              EPD V+   IL AC+    L+ G      +     +         IVD+  + G L 
Sbjct: 294 AGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLA 353

Query: 511 LARSLFDMIPAK-DLISWTIMIAGYGMH 537
           +A      +P + D   W  +++G  +H
Sbjct: 354 MAYKFIKSMPIEPDATIWGALLSGCRIH 381



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 177/378 (46%), Gaps = 42/378 (11%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGI---VIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           SILQ CA+   +  G+ VH     SG+   V       + L+ M+  CG L     VF+ 
Sbjct: 3   SILQACANCGDVSLGRAVHG----SGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDL 58

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +    V  W  L+  Y++ G   E++ LF +M   G++ D +T + VL   A  G+    
Sbjct: 59  MSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118

Query: 218 KDAHK--------------------------------LFDELSDRDVVSWNCMISGYIAN 245
           KD H                                 +F E+  +D++SWN MI GY  N
Sbjct: 119 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN 178

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
            +  + L +F +M+ L    D  T+  +L  CA+  +L  G+ VH   L+  F  +    
Sbjct: 179 SLPNEALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVA 237

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N L+DMY KCG    A  +F+ +  + +++WT MIAGY   G  + AI  F  M + GIE
Sbjct: 238 NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAES 424
           PD  +  SIL+AC+  GLL+ G    + ++ E +++  L     ++D+ A+ G +A A  
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357

Query: 425 VFNQMPVK-DIVSWNTMI 441
               MP++ D   W  ++
Sbjct: 358 FIKSMPIEPDATIWGALL 375



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 136/314 (43%), Gaps = 38/314 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            + + I  +   G  ++A+ + +  ++  +  D  T  ++L  CA   SLE+GK VH+ I
Sbjct: 66  TWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYI 125

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            E+ +  +  V  + L+ M+  CG +++   VF ++    +  WN ++  YSK     E+
Sbjct: 126 RENDMQSNIFVCNA-LMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEA 184

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK-------------------- 222
           L LF  M  L +  D  T +C+L   A + +  R K+ H                     
Sbjct: 185 LSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDM 243

Query: 223 ------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                       LFD +  +D+++W  MI+GY  +G     +  F EM   G   D  + 
Sbjct: 244 YVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSF 303

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSK-EISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +++L  C++ G L  G          C  K ++     ++D+ ++ G L  A +  + M 
Sbjct: 304 ISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMP 363

Query: 330 -ERSVVSWTSMIAG 342
            E     W ++++G
Sbjct: 364 IEPDATIWGALLSG 377



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 11/245 (4%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T   IL  CA L SL+ GK+VH  I  +G   D  V  + LV M+V CG     R
Sbjct: 196 KPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQV-ANALVDMYVKCGVPVLAR 254

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            +F+ I    +  W +++  Y   G    ++  F +M+  GI  D  +F   +  L    
Sbjct: 255 LLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSF---ISILYACS 311

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG--LEVFKEMLNLGFNVDLATM 270
           +S  + +  + F+ + D   V         I + +A  G     +K + ++    D    
Sbjct: 312 HSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIW 371

Query: 271 VTVLSGCANCGALMFGRAV--HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
             +LSGC     +     V  H F L+    +   +   L + Y++    +   ++ +K+
Sbjct: 372 GALLSGCRIHHDVKLAEKVAEHVFELE---PENTGYYVLLANTYAEAEKWEEVKKLRQKI 428

Query: 329 GERSV 333
           G R +
Sbjct: 429 GRRGL 433


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  854 bits (2207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/872 (49%), Positives = 562/872 (64%), Gaps = 61/872 (6%)

Query: 16  SPPNQSYGKKFASYKPSTLPIIVSSKSHSSCTI------------NPISASISKTLVCKT 63
           +PP  S      +  P   P  +S ++   C++            +P  A  S   V  T
Sbjct: 3   TPPVASISSHLRAPPPWPPPKNISQRARVRCSVLAPSGQALEAAASPRGAEKSPDWV-PT 61

Query: 64  KNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
            + N  I R C  G+LE+A+ +L S     +D ++Y ++LQLC++++SLE GK+ H ++ 
Sbjct: 62  SDVNLHIQRLCRSGDLEEALGLLGSD---GVDDRSYGAVLQLCSEVRSLEGGKRAHFLVR 118

Query: 124 ESGIVID--DGVLGSKLVFMFVTCGDLKEGRRVFNKIDN-GKVFIWNLLMHEYSKTGNFK 180
            S +  D  D VLG KLV M++ CGDL+  RRVF+++     V +W  LM  Y+K G+ +
Sbjct: 119 ASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLR 178

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGN--- 213
           E + LF+KM   G+  D+YT SCVLKC+A                         VGN   
Sbjct: 179 EGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALM 238

Query: 214 -----SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                S R KDA  +FD +  RDV+SWN MISG  +NG+ +K +E+F  M   G  +D A
Sbjct: 239 AFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSA 298

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+++VL  CA    L  GR VH +++K  F  + S  N LLDMYS C D     ++F  M
Sbjct: 299 TLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNM 358

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            +++VVSWT+MI  Y R G++D    LF+ M  EG  PD++AITS LHA A + LL+ GK
Sbjct: 359 VQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGK 418

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
            VH Y   N M+  L V+NALM+MY KCG+M +A+ +F+ +  KD++SWNT+IG      
Sbjct: 419 SVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNN 478

Query: 443 ----ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
               A  LF  ML    P+ VTM CILPA ASL++LERGRE+H Y LR G   D  VANA
Sbjct: 479 LANEAFSLFTEMLLQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANA 538

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           ++DMYVKCG L+LAR LFD +  K+LISWTIM+AGYGMHG G DAIA F  MR +GI PD
Sbjct: 539 LIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPD 598

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
             SF ++LYACSHSGL DEGWRFF+ MR E  IEP+L+HY CMVDLL  TGNL EAY FI
Sbjct: 599 AASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFI 658

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           + MP+ PD++IW SLL GCRIH  VKLAE+VAE VFELEP+NTGYYVLLAN+YAEAE+WE
Sbjct: 659 DSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWE 718

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
            V+KL+ KI  RGL++N GCSWIE KGKV++F+A   +HP   +I   L  +   M+ EG
Sbjct: 719 AVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEG 778

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
           + PK +YAL+ AD      ALCGHS KLA+AFG+LNL  G+ IRVTKN RVC  CHE AK
Sbjct: 779 HDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAK 838

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           F+SK   REI+LRDSNRFHHF+ GRCSCRG+W
Sbjct: 839 FISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/817 (48%), Positives = 531/817 (64%), Gaps = 53/817 (6%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            ++N+ I  +   G  ++A+++     SE ++I + T  S+L  CA+L     GK VH   
Sbjct: 266  SWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYS 325

Query: 123  CESGIVID--------DGVLGSKLVFMFVTCGDLKEGRRVFNKIDN-GKVFIWNLLMHEY 173
             +SG++ D        D  LGSKLVFM+V CGD+   RRVF+ + + G V +WNL+M  Y
Sbjct: 326  MKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGY 385

Query: 174  SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK----------- 222
            +K   F+ESL LF++M  LGI  D +  SC+LKC+  +  +R    AH            
Sbjct: 386  AKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQC 445

Query: 223  ---------------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                                 +FD +  +D +SWN +ISG  +NG+  + +E+F  M   
Sbjct: 446  AVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQ 505

Query: 262  GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
            G  +D  T+++VL  CA       GR VH +++K     E S  N LLDMYS C D    
Sbjct: 506  GHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHST 565

Query: 322  IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             ++F  M +++VVSWT+MI  Y R G+FD    L + MV +GI+PDV+A+TS+LH  A D
Sbjct: 566  NQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGD 625

Query: 382  GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
              L+ GK VH Y   N M+  L V+NALM+MY  C +M +A  VF+ +  KDI+SWNT+I
Sbjct: 626  ESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLI 685

Query: 442  G----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
            G          +  LF  ML  F+P+ VTM CILPA AS+++LERGREIH Y LR G   
Sbjct: 686  GGYSRNNFANESFSLFSDMLLQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLE 745

Query: 492  DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
            D   +NA+VDMYVKCG L++AR LFD +  K+LISWTIMIAGYGMHG G DA+A F  MR
Sbjct: 746  DSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMR 805

Query: 552  QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
             +G+EPD  SF ++LYAC HSGL  EGW+FFN MR E  IEPKL+HY C+VDLLS TGNL
Sbjct: 806  GSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNL 865

Query: 612  SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
             EA+ FIE MP+ PD++IW SLL GCRIH +VKLAEKVA+ VF+LEP+NTGYYVLLAN+Y
Sbjct: 866  KEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIY 925

Query: 672  AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
            AEAE+WE VKKL+ KI  RGL++N GCSWIE++GKV++F+A   +HP   +I   L  + 
Sbjct: 926  AEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVA 985

Query: 732  LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
              M+ EG+ PK +Y+L+ A++   + ALCGHS KLA+ FG+L+LP G+ IRVTKN +VC 
Sbjct: 986  RRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCS 1045

Query: 792  DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
             CHE AKF+SK   REI+LRDS+RFHHF+ GRCSCRG
Sbjct: 1046 HCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSCRG 1082



 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 174/561 (31%), Positives = 290/561 (51%), Gaps = 57/561 (10%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           + + N  I R C+ G+L  A+ +L S     +  ++YC+++QLC + +SLE  ++ H+++
Sbjct: 63  SSDVNLRIQRLCQAGDLAAALRLLGSD--GGVGVRSYCAVVQLCGEERSLEAARRAHALV 120

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN--GKVFIWNLLMHEYSKTGNFK 180
                 I   VLG +LV  ++ CGDL   R VF+++      V +W  LM  Y+K G+F+
Sbjct: 121 RAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQ 180

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------------------------ 216
           E + LF++MQ  G++ D++  SCVLKC+A +G+                           
Sbjct: 181 EGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALI 240

Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   ++DA ++FD +  RD +SWN  ISGY +NG  ++ +++F +M + G  +   
Sbjct: 241 ALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSV 300

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEI---------SFNNTLLDMYSKCGDLD 319
           T+++VL  CA  G  + G+ VH +++K+    ++         +  + L+ MY KCGD+ 
Sbjct: 301 TVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMG 360

Query: 320 GAIRVFEKMGERSVVS-WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
            A RVF+ M  +  V  W  ++ GYA+   F+ ++ LF  M   GI PD +A++ +L   
Sbjct: 361 SARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCI 420

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
            C      G   H Y+ +    +   V NAL+  YAK   + +A  VF++MP +D +SWN
Sbjct: 421 TCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWN 480

Query: 439 TMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRH 487
           ++I           A++LFV M +Q  E D  T+  +LPACA       GR +HGY ++ 
Sbjct: 481 SVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKT 540

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           G+  + ++ANA++DMY  C        +F  +  K+++SWT MI  Y   G         
Sbjct: 541 GLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLL 600

Query: 548 NDMRQAGIEPDEVSFISVLYA 568
            +M   GI+PD  +  SVL+ 
Sbjct: 601 QEMVLDGIKPDVFAVTSVLHG 621



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 188/376 (50%), Gaps = 23/376 (6%)

Query: 220 AHKLFDELSDR--DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           A  +FDE+  R  DV  W  ++S Y   G  ++G+ +F++M   G + D   +  VL   
Sbjct: 149 ARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCI 208

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A+ G++  G  +H    K    +  +  N L+ +YS+CG ++ A++VF+ M  R  +SW 
Sbjct: 209 ASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWN 268

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           S I+GY   G  D A+ LF  M  EG E     + S+L ACA  G   +GK VH Y  ++
Sbjct: 269 STISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKS 328

Query: 398 DM-------QSSL--YVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIG----- 442
            +       QS +   + + L+ MY KCG M  A  VF+ MP K ++  WN ++G     
Sbjct: 329 GLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKA 388

Query: 443 -----ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                +L LF  M +    PD   ++C+L     L+    G   HGY+++ G      V 
Sbjct: 389 AEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVC 448

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           NA++  Y K  ++  A  +FD +P +D ISW  +I+G   +G   +AI  F  M   G E
Sbjct: 449 NALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHE 508

Query: 557 PDEVSFISVLYACSHS 572
            D  + +SVL AC+ S
Sbjct: 509 LDSTTLLSVLPACARS 524



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 27/284 (9%)

Query: 409 LMDMYAKCGSMADAESVFNQMP--VKDIVSWNTMIGA----------LDLFVAM-LQNFE 455
           L+  Y KCG +  A  VF++MP  V D+  W +++ A          + LF  M      
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           PD   ++C+L   ASL ++  G  IHG + + G+     VANA++ +Y +CG +  A  +
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL- 574
           FD + A+D ISW   I+GY  +G+   A+  F+ M   G E   V+ +SVL AC+  G  
Sbjct: 256 FDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFE 315

Query: 575 ----VDEGWR-----FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
               V  G+       +++   +  I+  L   + +V +  + G++  A R  + MP   
Sbjct: 316 LVGKVVHGYSMKSGLLWDLESVQSGIDEALG--SKLVFMYVKCGDMGSARRVFDAMPSKG 373

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDNTGYYVLL 667
           +  +W  ++ G     E + +  + E + EL   PD      LL
Sbjct: 374 NVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLL 417


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/793 (50%), Positives = 517/793 (65%), Gaps = 52/793 (6%)

Query: 89   SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIV---------IDDGVLGSKLV 139
            S+ ++I + T  S+L  CA L     GK VH    +SG++         IDD  LGSKLV
Sbjct: 298  SQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLV 357

Query: 140  FMFVTCGDLKEGRRVFNKIDN-GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS 198
            FM+V CGD+   RRVF+ + + G V +WNL+M  Y+K G F+ESL LF +M  LGIA D 
Sbjct: 358  FMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDE 417

Query: 199  YTFSCVLKCLAVV--------------------------------GNSRRVKDAHKLFDE 226
            +  SC+LKC+  +                                  S  + DA  +F+ 
Sbjct: 418  HAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNR 477

Query: 227  LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
            +  +D +SWN +ISG  +NG+  + +E+F  M   G  +D  T+++VL  CA       G
Sbjct: 478  MPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAG 537

Query: 287  RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
            R VH +++K     E S  N LLDMYS C D     ++F  MG+++VVSWT+MI  Y R 
Sbjct: 538  RVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRA 597

Query: 347  GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
            G+FD    L + MV +GI PDV+A+TS LHA A D  L+ GK VH Y   N M+  L V+
Sbjct: 598  GLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVA 657

Query: 407  NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP 456
            NALM+MY KC ++ +A  +F+++  KD++SWNT+IG          +  LF  ML  F P
Sbjct: 658  NALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQFRP 717

Query: 457  DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
            + VTM CILPA AS+++LERGREIH Y LR G   D   +NA+VDMYVKCG L++AR LF
Sbjct: 718  NAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLF 777

Query: 517  DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
            D +  K+LISWTIMIAGYGMHGFG  AIA F  MR +GIEPD  SF ++LYAC HSGL  
Sbjct: 778  DRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAA 837

Query: 577  EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            EG RFF  M+ E  IEPKL+HY C+VDLLSRTG+L EA  FIE MP+ PD++IW SLL G
Sbjct: 838  EGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHG 897

Query: 637  CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
            CRIH  VKLAEKVA+ VF+LEP+NTGYYVLLAN+YAEAE+WE VKKL+ KI  RGL++N 
Sbjct: 898  CRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENT 957

Query: 697  GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
            G SWIE++ KV++F+A   +HP   +I   L  +   M++EG+ PK +YAL+ AD+   +
Sbjct: 958  GYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHD 1017

Query: 757  VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
             ALCGHS KLA+AFG+LNLP G+ IRVTKN +VC  CHE AKF+SK   REI+LRDS+RF
Sbjct: 1018 EALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRF 1077

Query: 817  HHFKDGRCSCRGF 829
            H F+ GRCSCRG+
Sbjct: 1078 HRFEGGRCSCRGY 1090



 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 203/649 (31%), Positives = 324/649 (49%), Gaps = 70/649 (10%)

Query: 47  TINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLC 106
           T NP S ++S        + N  I R C+ G+L  A+ +L S     +D ++YC ++QLC
Sbjct: 57  TKNPPSRALSS-------DVNLRIQRLCQAGDLAGALRLLGSD--GGVDVRSYCMVVQLC 107

Query: 107 ADLKSLEDGKKVHSIICESGIVIDDG---VLGSKLVFMFVTCGDLKEGRRVFNKI--DNG 161
            + +SLE  K+ H++I  S      G   VLG +LV  ++ CGDL E R VF+ +     
Sbjct: 108 GEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAA 167

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-------- 213
            V +W  LM  Y+K G+F+E++ LF++MQ  G++ D++  SCVLKC++ +G+        
Sbjct: 168 DVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIH 227

Query: 214 ----------------------SR--RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                 SR  R++DA ++FD +  RD +SWN MI G  +NG   
Sbjct: 228 GLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHG 287

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF----------S 299
             +++F +M + G  +   T+++VL  CA  G  + G+AVH +++K+             
Sbjct: 288 TAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGI 347

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAGYAREGVFDGAIRLFRG 358
            + +  + L+ MY KCGD+  A RVF+ M  +  V  W  ++ GYA+ G F+ ++ LF  
Sbjct: 348 DDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQ 407

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M   GI PD +AI+ +L    C      G   H YI +    +   V NAL+  YAK   
Sbjct: 408 MHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNM 467

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPA 467
           + DA  VFN+MP +D +SWN++I           A++LF+ M  Q  E D VT+  +LPA
Sbjct: 468 IGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPA 527

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           CA       GR +HGY ++ G+  + ++ANA++DMY  C        +F  +  K+++SW
Sbjct: 528 CAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSW 587

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
           T MI  Y   G          +M   GI PD  +  S L+A +    + +G +  +    
Sbjct: 588 TAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQG-KSVHGYTI 646

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
              +E  L     ++++  +  N+ EA R I       D   W +L+ G
Sbjct: 647 RNGMEKLLPVANALMEMYVKCRNVEEA-RLIFDRVTNKDVISWNTLIGG 694



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 162/351 (46%), Gaps = 32/351 (9%)

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS-- 402
           + G   GA+RL       G+  DV +   ++  C  +  LE  K  H  I+ +   ++  
Sbjct: 78  QAGDLAGALRLLGS--DGGV--DVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGG 133

Query: 403 --LYVSNALMDMYAKCGSMADAESVFNQMPVK--DIVSWNTMIGA----------LDLFV 448
               +   L+  Y KCG + +A +VF+ MP +  D+  W +++ A          + LF 
Sbjct: 134 KGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFR 193

Query: 449 AM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            M      PD   ++C+L   +SL +L  G  IHG + + G+     VANA++ +Y +CG
Sbjct: 194 QMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCG 253

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            +  A  +FD +  +D ISW  MI G   +G+   A+  F+ M   G E   V+ +SVL 
Sbjct: 254 RMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLP 313

Query: 568 ACS--HSGLVDE---GWRFFNMMRYECN-IEPKLEHYAC---MVDLLSRTGNLSEAYRFI 618
           AC+    GL+ +   G+   + + +  + ++  ++  A    +V +  + G+++ A R  
Sbjct: 314 ACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVF 373

Query: 619 EMMPVAPDATIWGSLLCG-CRI-HHEVKLAEKVAEHVFELEPDNTGYYVLL 667
           + M    +  +W  ++ G  ++   E  L+  V  H   + PD      LL
Sbjct: 374 DAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLL 424


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/641 (57%), Positives = 458/641 (71%), Gaps = 35/641 (5%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           L  E  D  +  +N  I  +   G   + +E+  +  +   +++L T  +VL  CA+  +
Sbjct: 59  LPSETIDCKITDYNIEICRFCELGNLRRAMELINQ--SPKPDLELRTYCSVLQLCADLKS 116

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           +  GR +H+         +    + L+ MY  CGDL    R+F+K+    V  W  ++ G
Sbjct: 117 IQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNG 176

Query: 343 YAREGVFDGAIRLFRGMVREGI--------------EPDVYAITSILHACACDGLLEIGK 388
           YA+ G F  ++ LF+ M   GI              + DV +  S++     +GL E G 
Sbjct: 177 YAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGL 236

Query: 389 DVHDYIK----ENDMQS----SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
           D+ + +       D+ +     L ++N L+DMY+K G++  A  VF  M  + +VSW +M
Sbjct: 237 DLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSM 296

Query: 441 I------GALDLFVAMLQNFE-----PDGVTMACILPACASLAALERGREIHGYILRHGI 489
           I      G  D+ V +    E     P+ +TMACILPACASLAALERG+EIHG+ILR+G 
Sbjct: 297 IAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGF 356

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
           S DR+VANA+VDMY+KCG L LAR LFDMIP KDL+SWT+MIAGYGMHG+G +AIA FN+
Sbjct: 357 SLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNE 416

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           MR +GIEPDEVSFIS+LYACSHSGL+DEGW FFNMMR  C IEPK EHYAC+VDLL+R G
Sbjct: 417 MRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAG 476

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
           NLS+AY+FI+MMP+ PDATIWG+LLCGCRI+H+VKLAEKVAEHVFELEP+NTGYYVLLAN
Sbjct: 477 NLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLAN 536

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           +YAEAEKWEEVKKLRE+I RRGL+KNPGCSWIEIKGKV+IFV G SSHP A KIE LLK+
Sbjct: 537 IYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKK 596

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
            R  MK EG+FPK RYALI AD+ EKE+ALCGHSEK+AMAFGIL+LP G+T+RVTKNLRV
Sbjct: 597 TRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRV 656

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CGDCHEMAKFMSK  +R+I+LRDSNRFHHFKDG CSCRG W
Sbjct: 657 CGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697



 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/552 (44%), Positives = 337/552 (61%), Gaps = 71/552 (12%)

Query: 3   IFMAKITTNFLFFSPPNQ-------SYGKKFASYKPSTLPIIVSSKSHSSCTINPISASI 55
           + ++K T N L+ SPP+Q       +Y   F  ++PS+   +VSS  + SC     S   
Sbjct: 2   LLISKTTPN-LWVSPPHQIHRENSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTSVLP 60

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDG 115
           S+T+ CK  +YN EI RFCE+GNL +AME++  S K  ++ +TYCS+LQLCADLKS++DG
Sbjct: 61  SETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDG 120

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           +++HSII +S  V  DGVLGSKLVFM+VTCGDL+EGRR+F+K+ N KVF+WNLLM+ Y+K
Sbjct: 121 RRIHSII-QSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAK 179

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSW 235
            GNF+ESL LFK+M+ LGI                    RRV+ A KLFDEL DRDV+SW
Sbjct: 180 IGNFRESLSLFKRMRELGI--------------------RRVESARKLFDELGDRDVISW 219

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N MISGY++NG++EKGL++F++ML LG N DLATMV+V                      
Sbjct: 220 NSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV---------------------- 257

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
                E++ NN LLDMYSK G+L+ AI+VFE MGERSVVSWTSMIAGYAREG+ D ++RL
Sbjct: 258 -----ELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRL 312

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           F  M +E + P+   +  IL ACA    LE G+++H +I  N      +V+NAL+DMY K
Sbjct: 313 FHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLK 372

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACI 464
           CG++  A  +F+ +P KD+VSW  MI           A+  F  M  +  EPD V+   I
Sbjct: 373 CGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISI 432

Query: 465 LPACASLAALERGREIHGYILRHG--ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
           L AC+    L+ G      ++R+   I         IVD+  + G L  A     M+P +
Sbjct: 433 LYACSHSGLLDEGWGFFN-MMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIE 491

Query: 523 -DLISWTIMIAG 533
            D   W  ++ G
Sbjct: 492 PDATIWGALLCG 503


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  731 bits (1888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/633 (55%), Positives = 442/633 (69%), Gaps = 10/633 (1%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           ++    S R++DA  +FDE+  RD++SWN +I G  +NG+ +K +E+F  M   G  +D 
Sbjct: 26  ISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDS 85

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T+++V+  C        G  VH ++++     E S  N LLDMYS C D     ++F  
Sbjct: 86  TTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRN 145

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M +++VVSWT+MI  Y R G FD    LF+ M  EGI PDV+AITS L A A +  L+ G
Sbjct: 146 MEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHG 205

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
           K VH Y   N ++  L V+NALM+MY KCG M +A  +F+ +  KD +SWNT+IG     
Sbjct: 206 KSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRS 265

Query: 443 -----ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                A  LF  ML    P+ VTMACILPA ASL++LERGRE+H Y +R G   D  VAN
Sbjct: 266 NLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVAN 325

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           A+VDMYVKCG L+LAR LFDM+  K+LISWTIMIAGYGMHG G DAIA F  M+ +GI+P
Sbjct: 326 ALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQP 385

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           D  SF ++LYACSHSGL DEGWRFFN MR E  IEPKL+HYACMVDLL  TGNL EAY F
Sbjct: 386 DAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEF 445

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           IE MP+ PD++IW SLL GCRIH  VKLAEKVAE VFELEP+NTGYYVLLAN+YAEAE+W
Sbjct: 446 IETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERW 505

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
           E V+KL+ K+  RGL++N GCSWIE++GK +IF A   +HP   +I   L  +   M+ E
Sbjct: 506 EAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEE 565

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           G+ PK +YAL+ AD+   + ALCGHS KLA+AFG+LNL  G+ IRVTKN RVC  CHE A
Sbjct: 566 GHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAA 625

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KF+SK   REI+LRDSNRFHHF++GRCSCRG+W
Sbjct: 626 KFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 191/397 (48%), Gaps = 16/397 (4%)

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
           M G  VH + +K  F  + +  N L+  Y+K   ++ A+ VF++M +R ++SW S+I G 
Sbjct: 1   MDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGC 60

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
           A  G++D A+ LF  M  EG E D   + S++ AC       IG  VH Y     + S  
Sbjct: 61  ASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALD----LFVAM-LQ 452
            + NAL+DMY+ C        +F  M  K++VSW  MI      G  D    LF  M L+
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
              PD   +   L A A   +L+ G+ +HGY +R+GI     VANA+++MYVKCG +  A
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA 240

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           R +FD +  KD ISW  +I GY       +A   FN+M    + P+ V+   +L A +  
Sbjct: 241 RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASL 299

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
             ++ G            +E      A +VD+  + G L  A R  +M+    +   W  
Sbjct: 300 SSLERGREMHAYAVRRGYLEDNFVANA-LVDMYVKCGALLLARRLFDML-TNKNLISWTI 357

Query: 633 LLCGCRIHHEVKLAEKVAEHV--FELEPDNTGYYVLL 667
           ++ G  +H   + A  + E +    ++PD   +  +L
Sbjct: 358 MIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAIL 394



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 201/413 (48%), Gaps = 38/413 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ IG     G  +KA+E+      E  ++D+ T  S++  C        G  VH   
Sbjct: 52  SWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYS 111

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +G+ I +  LG+ L+ M+  C D +   ++F  ++   V  W  ++  Y++ G+F + 
Sbjct: 112 VRTGL-ISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKV 170

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA----------VVGNSRR---------------- 216
             LF++M   GI  D +  +  L   A          V G + R                
Sbjct: 171 AGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEM 230

Query: 217 ------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 +++A  +FD ++ +D +SWN +I GY  + +A +   +F EML L    +  TM
Sbjct: 231 YVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTM 289

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             +L   A+  +L  GR +HA+A++  + ++    N L+DMY KCG L  A R+F+ +  
Sbjct: 290 ACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTN 349

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           ++++SWT MIAGY   G    AI LF  M   GI+PD  + ++IL+AC+  GL + G   
Sbjct: 350 KNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRF 409

Query: 391 HDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
            + ++ E+ ++  L     ++D+    G++ +A      MP++ D   W +++
Sbjct: 410 FNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLL 462



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 95/447 (21%), Positives = 177/447 (39%), Gaps = 82/447 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  +   G+ +K   +      E  + D     S L   A  +SL+ GK VH   
Sbjct: 153 SWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYA 212

Query: 123 CESGIVIDDGVL--GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
             +GI   + VL   + L+ M+V CG ++E R +F+ +       WN L+  YS++    
Sbjct: 213 IRNGI---EEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLAN 269

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------- 221
           E+  LF +M  L +  ++ T +C+L   A + +  R ++ H                   
Sbjct: 270 EAFTLFNEML-LQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALV 328

Query: 222 -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                        +LFD L++++++SW  MI+GY  +G     + +F++M   G   D  
Sbjct: 329 DMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAG 388

Query: 269 TMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           +   +L  C++ G    G R  +A   +     ++     ++D+    G+L  A    E 
Sbjct: 389 SFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIET 448

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M                                   IEPD     S+L  C     +++ 
Sbjct: 449 M----------------------------------PIEPDSSIWVSLLRGCRIHRNVKLA 474

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VSWNTMIG 442
           + V + + E + +++ Y    L ++YA+         + N++  + +      SW  + G
Sbjct: 475 EKVAEMVFELEPENTGYYV-LLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRG 533

Query: 443 ALDLFVAMLQNFEPDGVTMACILPACA 469
              +F A  +N  P G+ +A  L   A
Sbjct: 534 KAHIFFAENRN-HPQGMRIAEFLDDVA 559



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 15/222 (6%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSE--KSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T ++N  IG +    NL      L++    + + +  T   IL   A L SLE G+++H+
Sbjct: 252 TISWNTLIGGYSR-SNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSSLERGREMHA 310

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
                G  ++D  + + LV M+V CG L   RR+F+ + N  +  W +++  Y   G  +
Sbjct: 311 YAVRRG-YLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGR 369

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----W 235
           +++ LF++M+  GI  D+ +FS +L   +   +S    +  + F+ + +   +      +
Sbjct: 370 DAIALFEQMKGSGIQPDAGSFSAILYACS---HSGLRDEGWRFFNAMRNEHRIEPKLKHY 426

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
            CM+      G  ++  E  + M       D +  V++L GC
Sbjct: 427 ACMVDLLCHTGNLKEAYEFIETM---PIEPDSSIWVSLLRGC 465


>gi|255562460|ref|XP_002522236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538489|gb|EEF40094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 640

 Score =  629 bits (1623), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 323/578 (55%), Positives = 403/578 (69%), Gaps = 50/578 (8%)

Query: 5   MAKITTNFLFFSPPNQSY---GKKFAS----YKPSTLPIIVSSKSHSSCTINPISASISK 57
           MA+ T    F SP N+++     KF S     KP      +SS  HSS     I +S +K
Sbjct: 1   MAQTTPVSFFISPHNKNHRESSTKFQSSLLFTKPYPKSNFLSSSLHSSYATLSIFSSPAK 60

Query: 58  TLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKK 117
               K  ++N +I   CEVG+L+ A+E+L    KS ID+ TYCSILQLCA+L SL++GKK
Sbjct: 61  EEDFKIADFNRKICELCEVGSLKNAIELLDMYPKSNIDSNTYCSILQLCAELNSLQEGKK 120

Query: 118 VHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
           VHS I  SGI +D G+LG+KLVFM+V CGD++EGR +F+KI N KVF+WNL++  Y+K G
Sbjct: 121 VHSFISSSGIFVD-GLLGTKLVFMYVNCGDIREGRVIFDKIANEKVFLWNLMLSGYAKIG 179

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN------------------------ 213
            F+ES+YLF+KM  LGI  +S+T SC+LKC A +G+                        
Sbjct: 180 AFEESVYLFRKMLDLGIQVNSHTVSCILKCFAALGSVKEGEWVHGYLLKLGFGSYNTVVN 239

Query: 214 --------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                   +R+++ A+++FDEL +RD+VSWN MISG +AN + EKG++VFKEML LG + 
Sbjct: 240 SLISFYFKTRKIEAAYEVFDELKNRDIVSWNSMISGTVANDLPEKGIQVFKEMLYLGVSF 299

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           DL T+V VL+ CAN G    GR +HAFA+KA   + ++F NTLLDMYSKCGDL+ AIRVF
Sbjct: 300 DLVTLVNVLAACANSGNFPLGRVLHAFAIKAQLDQRMTFVNTLLDMYSKCGDLNNAIRVF 359

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           +KMGERSVVSWTS+IAGYAREG+    IRLF  M REG+ PD + +T++LHACAC G LE
Sbjct: 360 QKMGERSVVSWTSLIAGYAREGLSGEGIRLFHEMEREGVRPDNFTVTAVLHACACSGSLE 419

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-- 443
           IGKDVHDY+KEN+MQ    V N+LMDMYAKCGSM DA  VF +MP KDIVSWNTMIG   
Sbjct: 420 IGKDVHDYVKENNMQKDRIVCNSLMDMYAKCGSMEDANLVFLEMPNKDIVSWNTMIGGYS 479

Query: 444 --------LDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                   L LFVAM+Q  +PDG TMACILPACASLAAL+RGREIHGYI R+G   D +V
Sbjct: 480 KNGRPNETLHLFVAMVQELKPDGRTMACILPACASLAALDRGREIHGYIQRNGCFDDLHV 539

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           ANA++DMY KCG L LAR  FDMIP KDLISWT+MIAG
Sbjct: 540 ANALIDMYAKCGALALARLFFDMIPVKDLISWTVMIAG 577



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 1/186 (0%)

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQ 452
           Y K N + SSL+ S A + +++      D +       + ++    ++  A++L + M  
Sbjct: 35  YPKSNFLSSSLHSSYATLSIFSSPAKEEDFKIADFNRKICELCEVGSLKNAIEL-LDMYP 93

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
               D  T   IL  CA L +L+ G+++H +I   GI  D  +   +V MYV CG +   
Sbjct: 94  KSNIDSNTYCSILQLCAELNSLQEGKKVHSFISSSGIFVDGLLGTKLVFMYVNCGDIREG 153

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           R +FD I  + +  W +M++GY   G   +++  F  M   GI+ +  +   +L   +  
Sbjct: 154 RVIFDKIANEKVFLWNLMLSGYAKIGAFEESVYLFRKMLDLGIQVNSHTVSCILKCFAAL 213

Query: 573 GLVDEG 578
           G V EG
Sbjct: 214 GSVKEG 219


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 316/820 (38%), Positives = 488/820 (59%), Gaps = 58/820 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A +  +C +G+ E+ +++ Y   +E  + D   +  + + C++LK+   GK V+  +
Sbjct: 157 SWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYM 216

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G   +  V GS ++ MF+ CG +   RR F +I+   VF+WN+++  Y+  G FK++
Sbjct: 217 LSIGFEGNSCVKGS-ILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKA 275

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-----DRDVVSWNC 237
           L     M+  G+  D  T++ ++   A  G   + ++A K F E+        +VVSW  
Sbjct: 276 LKCISDMKLSGVKPDQVTWNAIISGYAQSG---QFEEASKYFLEMGGLKDFKPNVVSWTA 332

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I+G   NG   + L VF++M+  G   +  T+ + +S C N   L  GR +H + +K  
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392

Query: 298 -FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
               ++   N+L+D Y+KC  ++ A R F  + +  +VSW +M+AGYA  G  + AI L 
Sbjct: 393 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELL 452

Query: 357 RGMVREGIEPDVYA-----------------------------------ITSILHACACD 381
             M  +GIEPD+                                     I+  L AC   
Sbjct: 453 SEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQV 512

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             L++GK++H Y+  N ++ S  V +AL+ MY+ C S+  A SVF+++  +D+V WN++I
Sbjct: 513 RNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSII 572

Query: 442 ----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      ALDL   M L N E + VTM   LPAC+ LAAL +G+EIH +I+R G+ 
Sbjct: 573 SACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLD 632

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
               + N+++DMY +CG +  +R +FD++P +DL+SW +MI+ YGMHGFG DA+  F   
Sbjct: 633 TCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQF 692

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
           R  G++P+ ++F ++L ACSHSGL++EGW++F MM+ E  ++P +E YACMVDLLSR G 
Sbjct: 693 RTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQ 752

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
            +E   FIE MP  P+A +WGSLL  CRIH    LAE  A ++FELEP ++G YVL+AN+
Sbjct: 753 FNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANI 812

Query: 671 YAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL 730
           Y+ A +WE+  K+R  +  RG+ K PGCSWIE+K K++ FV G +SHP  ++I + ++ L
Sbjct: 813 YSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESL 872

Query: 731 RLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVC 790
             ++K  GY P T + L + DE EKE +LCGHSEK+A+AFG+++  AG  +R+ KNLRVC
Sbjct: 873 YFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVC 932

Query: 791 GDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           GDCH   KF+SK  +R+I++RD+ RFHHF DG CSC  +W
Sbjct: 933 GDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 172/644 (26%), Positives = 288/644 (44%), Gaps = 124/644 (19%)

Query: 77  GNLEKAMEVLYSSEKSKID--TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G L  A  +L S + +  D   + Y SILQ C  L +L  G +VH+ +  +G+ + +  L
Sbjct: 68  GVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE-FL 126

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
           GS+L+ ++   G +++ RR+F+K+    VF W  +M  Y   G+++E++ LF  M + G+
Sbjct: 127 GSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGV 186

Query: 195 AADSYTFSCVLKCLAVVGNSRRVKD--------------------------------AHK 222
             D + F  V K  + + N R  KD                                A +
Sbjct: 187 RPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARR 246

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
            F+E+  +DV  WN M+SGY + G  +K L+   +M   G   D  T   ++SG      
Sbjct: 247 FFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG------ 300

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-----ERSVVSWT 337
                                        Y++ G  + A + F +MG     + +VVSWT
Sbjct: 301 -----------------------------YAQSGQFEEASKYFLEMGGLKDFKPNVVSWT 331

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY-IKE 396
           ++IAG  + G    A+ +FR MV EG++P+   I S + AC    LL  G+++H Y IK 
Sbjct: 332 ALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKV 391

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
            ++ S L V N+L+D YAKC S+  A   F  +   D+VSWN M+           A++L
Sbjct: 392 EELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIEL 451

Query: 447 FVAM-LQNFEPDGV-----------------------------------TMACILPACAS 470
              M  Q  EPD +                                   T++  L AC  
Sbjct: 452 LSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQ 511

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           +  L+ G+EIHGY+LR+ I     V +A++ MY  C  L +A S+F  +  +D++ W  +
Sbjct: 512 VRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSI 571

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I+     G   +A+    +M  + +E + V+ +S L ACS    + +G      +   C 
Sbjct: 572 ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI-IRCG 630

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           ++        ++D+  R G++ ++ R  ++MP   D   W  ++
Sbjct: 631 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMI 673



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 189/414 (45%), Gaps = 34/414 (8%)

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
           R GV + A  L   M     +  +    SIL  C     L +G  VH  +  N +    +
Sbjct: 66  RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QN 453
           + + L+++Y + G + DA  +F++M  +++ SW  ++            + LF  M+ + 
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
             PD      +  AC+ L     G++++ Y+L  G   +  V  +I+DM++KCG + +AR
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
             F+ I  KD+  W IM++GY   G    A+   +DM+ +G++PD+V++ +++   + SG
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSG 305

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA---YRFIEMMPVAPDATIW 630
             +E  ++F  M    + +P +  +  ++    + G   EA   +R + +  V P++   
Sbjct: 306 QFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITI 365

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV--LLANVYAEAEKWEEVKKLREKIS 688
            S +  C     ++   ++  +  ++E  ++   V   L + YA   K   V+  R K  
Sbjct: 366 ASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA---KCRSVEVARRKFG 422

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSH-PHAKKIESLLKRLRLEMKREGYFP 741
              +K+    SW       N  +AG +    H + IE     L  EMK +G  P
Sbjct: 423 M--IKQTDLVSW-------NAMLAGYALRGSHEEAIE-----LLSEMKFQGIEP 462


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 306/811 (37%), Positives = 481/811 (59%), Gaps = 47/811 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +G + + G  E+A ++      +  K D +T+ S+L  CAD ++++ G++++++I
Sbjct: 178 SWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLI 237

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G   D  V G+ L+ M + CGD+ +  +VF+ +    +  W  ++   ++ G FK++
Sbjct: 238 LKAGWDTDLFV-GTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQA 296

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC--------------------------------LAV 210
             LF++M+  G+  D   F  +L+                                 L++
Sbjct: 297 CNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSM 356

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 ++DA ++FD +  R+VVSW  MI+G+  +G  ++    F +M+  G   +  T 
Sbjct: 357 YTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTF 416

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           +++L  C++  AL  G+ +    ++A +  +      LL MY+KCG L  A RVFEK+ +
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISK 476

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           ++VV+W +MI  Y +   +D A+  F+ +++EGI+P+    TSIL+ C     LE+GK V
Sbjct: 477 QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWV 536

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I +  ++S L+VSNAL+ M+  CG +  A+++FN MP +D+VSWNT+I         
Sbjct: 537 HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKN 596

Query: 443 --ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             A D F  M ++  +PD +T   +L ACAS  AL  GR +H  I       D  V   +
Sbjct: 597 QVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGL 656

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + MY KCG +  A  +F  +P K++ SWT MIAGY  HG G +A+  F  M+Q G++PD 
Sbjct: 657 ISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDW 716

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           ++F+  L AC+H+GL++EG   F  M+ E NIEP++EHY CMVDL  R G L+EA  FI 
Sbjct: 717 ITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFII 775

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            M V PD+ +WG+LL  C++H  V+LAEK A+   EL+P++ G +V+L+N+YA A  W+E
Sbjct: 776 KMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKE 835

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V K+R+ +  RG+ K PG SWIE+ GKV+ F +   +HP  ++I + L+RL +EM++ GY
Sbjct: 836 VAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGY 895

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P TRY L + ++ EKE AL  HSE+LA+ +G+L  P    I ++KNLRVCGDCH   KF
Sbjct: 896 VPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKF 955

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +SK  +R+I+ RDSNRFHHFKDG CSC  FW
Sbjct: 956 ISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 197/626 (31%), Positives = 330/626 (52%), Gaps = 54/626 (8%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDT--KTYCSILQLCADLKSLEDGKKVHS 120
           T+  NA + R  + G   +AM+VL   + S I    +TY ++LQLC   K+L DG+++++
Sbjct: 75  TQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYN 134

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            I +SG V  D  + + L+ M+  CG+    +++F+ +    V+ WNLL+  Y + G ++
Sbjct: 135 HIKKSG-VQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYE 193

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------------------------ 216
           E+  L ++M    +  D  TF  +L   A   N  +                        
Sbjct: 194 EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253

Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   + DA K+FD L  RD+V+W  MI+G   +G  ++   +F+ M   G   D  
Sbjct: 254 NMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKV 313

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
             V++L  C +  AL  G+ VHA   +  +  EI     +L MY+KCG ++ A+ VF+ +
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             R+VVSWT+MIAG+A+ G  D A   F  M+  GIEP+     SIL AC+    L+ G+
Sbjct: 374 KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQ 433

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------- 441
            + D+I E    S   V  AL+ MYAKCGS+ DA  VF ++  +++V+WN MI       
Sbjct: 434 QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHE 493

Query: 442 ---GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
               AL  F A+L +  +P+  T   IL  C S  +LE G+ +H  I++ G+ +D +V+N
Sbjct: 494 QYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSN 553

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           A+V M+V CG L+ A++LF+ +P +DL+SW  +IAG+  HG    A   F  M+++GI+P
Sbjct: 554 ALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKP 613

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMR---YECNIEPKLEHYACMVDLLSRTGNLSEA 614
           D+++F  +L AC+    + EG R   ++    ++C++         ++ + ++ G++ +A
Sbjct: 614 DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVG----TGLISMYTKCGSIEDA 669

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIH 640
           ++    +P   +   W S++ G   H
Sbjct: 670 HQVFHKLP-KKNVYSWTSMIAGYAQH 694



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 175/561 (31%), Positives = 296/561 (52%), Gaps = 25/561 (4%)

Query: 146 GDLKEGRRVFNKIDNGKVFIW----NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           G   E  +V  ++D+  + I+    + L+    K  N  +   ++  ++  G+  D +  
Sbjct: 89  GQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMR 148

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
           + ++   A  GN+   K   ++FD++ ++DV SWN ++ GY+ +G+ E+  ++ ++M+  
Sbjct: 149 NTLINMYAKCGNTISAK---QIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQD 205

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               D  T V++L+ CA+   +  GR ++   LKA +  ++     L++M+ KCGD+  A
Sbjct: 206 SVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDA 265

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            +VF+ +  R +V+WTSMI G AR G F  A  LF+ M  EG++PD  A  S+L AC   
Sbjct: 266 TKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHP 325

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             LE GK VH  +KE    + +YV  A++ MY KCGSM DA  VF+ +  +++VSW  MI
Sbjct: 326 EALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMI 385

Query: 442 ------GALD----LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                 G +D     F  M+++  EP+ VT   IL AC+S +AL+RG++I  +I+  G  
Sbjct: 386 AGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG 445

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
           +D  V  A++ MY KCG L  A  +F+ I  +++++W  MI  Y  H    +A+ATF  +
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQAL 505

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEG-WRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
            + GI+P+  +F S+L  C  S  ++ G W  F +M+    +E  L     +V +    G
Sbjct: 506 LKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMK--AGLESDLHVSNALVSMFVNCG 563

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL 667
           +L  A      MP   D   W +++ G   H + ++A    + + E  ++PD   +  LL
Sbjct: 564 DLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLL 622

Query: 668 ANVYAEAEKWEEVKKLREKIS 688
            N  A  E   E ++L   I+
Sbjct: 623 -NACASPEALTEGRRLHALIT 642



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 248/479 (51%), Gaps = 16/479 (3%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           +D    N +++     G   + ++V + + +    +   T   +L  C     L  G  +
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           +    K+    +I   NTL++MY+KCG+   A ++F+ M E+ V SW  ++ GY + G++
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
           + A +L   MV++ ++PD     S+L+ACA    ++ G+++++ I +    + L+V  AL
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL----------DLFVAMLQN-FEPDG 458
           ++M+ KCG + DA  VF+ +P +D+V+W +MI  L          +LF  M +   +PD 
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           V    +L AC    ALE+G+++H  +   G   +  V  AI+ MY KCG +  A  +FD+
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +  ++++SWT MIAG+  HG   +A   FN M ++GIEP+ V+F+S+L ACS    +  G
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
            +  + +  E            ++ + ++ G+L +A+R  E +    +   W +++    
Sbjct: 433 QQIQDHI-IEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYV 490

Query: 639 IHHEVKLAEKVAEHVFE--LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
            H +   A    + + +  ++P+++ +  +L NV   ++  E  K +   I + GL+ +
Sbjct: 491 QHEQYDNALATFQALLKEGIKPNSSTFTSIL-NVCKSSDSLELGKWVHFLIMKAGLESD 548


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 305/811 (37%), Positives = 480/811 (59%), Gaps = 47/811 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +G + + G  E+A ++      +  K D +T+ S+L  CAD ++++ G++++++I
Sbjct: 178 SWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLI 237

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G   D  V G+ L+ M + CGD+ +  +VF+ +    +  W  ++   ++ G FK++
Sbjct: 238 LKAGWDTDLFV-GTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQA 296

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC--------------------------------LAV 210
             LF++M+  G+  D   F  +L+                                 L++
Sbjct: 297 CNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSM 356

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 ++DA ++FD +  R+VVSW  MI+G+  +G  ++    F +M+  G   +  T 
Sbjct: 357 YTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTF 416

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           +++L  C++  AL  G+ +    ++A +  +      LL MY+KCG L  A RVFEK+ +
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISK 476

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           ++VV+W +MI  Y +   +D A+  F+ +++EGI+P+    TSIL+ C     LE+GK V
Sbjct: 477 QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWV 536

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I +  ++S L+VSNAL+ M+  CG +  A+++FN MP +D+VSWNT+I         
Sbjct: 537 HFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKN 596

Query: 443 --ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             A D F  M ++  +PD +T   +L ACAS  AL  GR +H  I       D  V   +
Sbjct: 597 QVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGL 656

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + MY KCG +  A  +F  +P K++ SWT MI GY  HG G +A+  F  M+Q G++PD 
Sbjct: 657 ISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDW 716

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           ++F+  L AC+H+GL++EG   F  M+ E NIEP++EHY CMVDL  R G L+EA  FI 
Sbjct: 717 ITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFII 775

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            M V PD+ +WG+LL  C++H  V+LAEK A+   EL+P++ G +V+L+N+YA A  W+E
Sbjct: 776 KMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKE 835

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V K+R+ +  RG+ K PG SWIE+ GKV+ F +   +HP  ++I + L+RL +EM++ GY
Sbjct: 836 VAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGY 895

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P TRY L + ++ EKE AL  HSE+LA+ +G+L  P    I ++KNLRVCGDCH   KF
Sbjct: 896 VPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKF 955

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +SK  +R+I+ RDSNRFHHFKDG CSC  FW
Sbjct: 956 ISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 197/626 (31%), Positives = 330/626 (52%), Gaps = 54/626 (8%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDT--KTYCSILQLCADLKSLEDGKKVHS 120
           T+  NA + R  + G   +AM+VL   + S I    +TY ++LQLC   K+L DG+++++
Sbjct: 75  TQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYN 134

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            I +SG V  D  + + L+ M+  CG+    +++F+ +    V+ WNLL+  Y + G ++
Sbjct: 135 HIKKSG-VQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYE 193

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------------------------ 216
           E+  L ++M    +  D  TF  +L   A   N  +                        
Sbjct: 194 EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253

Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   + DA K+FD L  RD+V+W  MI+G   +G  ++   +F+ M   G   D  
Sbjct: 254 NMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKV 313

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
             V++L  C +  AL  G+ VHA   +  +  EI     +L MY+KCG ++ A+ VF+ +
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             R+VVSWT+MIAG+A+ G  D A   F  M+  GIEP+     SIL AC+    L+ G+
Sbjct: 374 KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQ 433

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------- 441
            + D+I E    S   V  AL+ MYAKCGS+ DA  VF ++  +++V+WN MI       
Sbjct: 434 QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHE 493

Query: 442 ---GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
               AL  F A+L +  +P+  T   IL  C S  +LE G+ +H  I++ G+ +D +V+N
Sbjct: 494 QYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSN 553

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           A+V M+V CG L+ A++LF+ +P +DL+SW  +IAG+  HG    A   F  M+++GI+P
Sbjct: 554 ALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKP 613

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMR---YECNIEPKLEHYACMVDLLSRTGNLSEA 614
           D+++F  +L AC+    + EG R   ++    ++C++         ++ + ++ G++ +A
Sbjct: 614 DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVG----TGLISMYTKCGSIEDA 669

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIH 640
           ++    +P   +   W S++ G   H
Sbjct: 670 HQVFHKLP-KKNVYSWTSMITGYAQH 694



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 175/561 (31%), Positives = 297/561 (52%), Gaps = 25/561 (4%)

Query: 146 GDLKEGRRVFNKIDNGKVFIW----NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           G   E  +V  ++D+  + I+    + L+    K  N  +   ++  ++  G+  D + +
Sbjct: 89  GQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMW 148

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
           + ++   A  GN+   K   ++FD++ ++DV SWN ++ GY+ +G+ E+  ++ ++M+  
Sbjct: 149 NTLINMYAKCGNTISAK---QIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQD 205

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               D  T V++L+ CA+   +  GR ++   LKA +  ++     L++M+ KCGD+  A
Sbjct: 206 SVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDA 265

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            +VF+ +  R +V+WTSMI G AR G F  A  LF+ M  EG++PD  A  S+L AC   
Sbjct: 266 TKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHP 325

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             LE GK VH  +KE    + +YV  A++ MY KCGSM DA  VF+ +  +++VSW  MI
Sbjct: 326 EALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMI 385

Query: 442 ------GALD----LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                 G +D     F  M+++  EP+ VT   IL AC+S +AL+RG++I  +I+  G  
Sbjct: 386 AGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG 445

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
           +D  V  A++ MY KCG L  A  +F+ I  +++++W  MI  Y  H    +A+ATF  +
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQAL 505

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEG-WRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
            + GI+P+  +F S+L  C  S  ++ G W  F +M+    +E  L     +V +    G
Sbjct: 506 LKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMK--AGLESDLHVSNALVSMFVNCG 563

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL 667
           +L  A      MP   D   W +++ G   H + ++A    + + E  ++PD   +  LL
Sbjct: 564 DLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLL 622

Query: 668 ANVYAEAEKWEEVKKLREKIS 688
            N  A  E   E ++L   I+
Sbjct: 623 -NACASPEALTEGRRLHALIT 642



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 248/479 (51%), Gaps = 16/479 (3%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           +D    N +++     G   + ++V + + +    +   T   +L  C     L  G  +
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           +    K+    +I   NTL++MY+KCG+   A ++F+ M E+ V SW  ++ GY + G++
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
           + A +L   MV++ ++PD     S+L+ACA    ++ G+++++ I +    + L+V  AL
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL----------DLFVAMLQN-FEPDG 458
           ++M+ KCG + DA  VF+ +P +D+V+W +MI  L          +LF  M +   +PD 
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           V    +L AC    ALE+G+++H  +   G   +  V  AI+ MY KCG +  A  +FD+
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +  ++++SWT MIAG+  HG   +A   FN M ++GIEP+ V+F+S+L ACS    +  G
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
            +  + +  E            ++ + ++ G+L +A+R  E +    +   W +++    
Sbjct: 433 QQIQDHI-IEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYV 490

Query: 639 IHHEVKLAEKVAEHVFE--LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
            H +   A    + + +  ++P+++ +  +L NV   ++  E  K +   I + GL+ +
Sbjct: 491 QHEQYDNALATFQALLKEGIKPNSSTFTSIL-NVCKSSDSLELGKWVHFLIMKAGLESD 548


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 312/810 (38%), Positives = 487/810 (60%), Gaps = 48/810 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ I      G   +A+ +   +++ ++  DT T+ S++  CA L   E  K +H  + 
Sbjct: 83  WNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVL 142

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G    D  +G+ L+ M+    DL + R+VF ++    V  WN L+  Y+  G + E+L
Sbjct: 143 DMGFG-SDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEAL 201

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR--------------------------- 216
            ++ + ++LG+  DSYT S VL+    +G+                              
Sbjct: 202 EIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMY 261

Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                + D  ++FD++  RD VSWN MI GY   G+ E+ +++F EM+N  F  DL T+ 
Sbjct: 262 CKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTIT 320

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++L  C + G L FG+ VH + + + +  + + +N L++MY+KCG+L  +  VF  M  +
Sbjct: 321 SILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK 380

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             VSW SMI  Y + G FD A++LF+ M++  ++PD      +L      G L +GK++H
Sbjct: 381 DSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELH 439

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL------D 445
             + +    S++ VSN L+DMYAKCG M D+  VF  M  +DI++WNT+I +       +
Sbjct: 440 CDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCN 499

Query: 446 LFVAML-----QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
           L + M+     +   PD  TM  ILP C+ LAA  +G+EIHG I + G+ +D  V N ++
Sbjct: 500 LGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLI 559

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           +MY KCG L  +  +F ++  KD+++WT +I+  GM+G G  A+  F +M  AGI PD V
Sbjct: 560 EMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHV 619

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+++++ACSHSGLV+EG  +F+ M+ +  IEP++EHYAC+VDLLSR+  L +A  FI  
Sbjct: 620 AFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILS 679

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ PD++IWG+LL  CR+  + ++AE+V+E + EL PD+TGYYVL++N+YA   KW++V
Sbjct: 680 MPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQV 739

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
           + +R+ I  RGLKK+PGCSW+EI+ KV +F  G       +++  LL  L   M +EGY 
Sbjct: 740 RSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYI 799

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
              ++ L + DE EK   LCGHSE+LA+AFG+LN   G  ++V KNLRVC DCH + K++
Sbjct: 800 ANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYI 859

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK  +RE+++RD+NRFH FKDG CSC  +W
Sbjct: 860 SKIVQRELLVRDANRFHVFKDGACSCGDYW 889



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 219/425 (51%), Gaps = 20/425 (4%)

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           +V  WN +I     NG+  + L ++ E   +    D  T  +V++ CA        +++H
Sbjct: 79  NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 138

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
              L   F  ++   N L+DMY +  DLD A +VFE+M  R VVSW S+I+GY   G ++
Sbjct: 139 DRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWN 198

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A+ ++      G+ PD Y ++S+L AC   G +E G  +H  I++  ++  + V+N L+
Sbjct: 199 EALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLL 258

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFEPDGVT 460
            MY K   + D   +F++M ++D VSWNTMI           ++ LF+ M+  F+PD +T
Sbjct: 259 SMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLT 318

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           +  IL AC  L  LE G+ +H Y++  G   D   +N +++MY KCG L+ ++ +F  + 
Sbjct: 319 ITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMK 378

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
            KD +SW  MI  Y  +G   +A+  F  M +  ++PD V+++ +L   +  G +  G  
Sbjct: 379 CKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLHLGKE 437

Query: 581 F---FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
                  M +  NI         +VD+ ++ G + ++ +  E M  A D   W +++  C
Sbjct: 438 LHCDLAKMGFNSNIVVS----NTLVDMYAKCGEMGDSLKVFENMK-ARDIITWNTIIASC 492

Query: 638 RIHHE 642
            +H E
Sbjct: 493 -VHSE 496


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 312/810 (38%), Positives = 486/810 (60%), Gaps = 48/810 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ I      G   +A+ +   +++ ++  DT T+ S++  CA L   E  K +H  + 
Sbjct: 142 WNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVL 201

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             G    D  +G+ L+ M+    DL + R+VF ++    V  WN L+  Y+  G + E+L
Sbjct: 202 XMGFG-SDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEAL 260

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR--------------------------- 216
            ++ + ++LG+  DSYT S VL+    +G+                              
Sbjct: 261 EIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMY 320

Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                + D  ++FD++  RD VSWN MI GY   G+ E+ +++F EM+N  F  DL T+ 
Sbjct: 321 CKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTIT 379

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++L  C + G L FG+ VH + + + +  + + +N L++MY+KCG+L  +  VF  M  +
Sbjct: 380 SILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK 439

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             VSW SMI  Y + G FD A++LF+ M++  ++PD      +L      G L +GK++H
Sbjct: 440 DSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELH 498

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL------D 445
             + +    S++ VSN L+DMYAKCG M D+  VF  M  +DI++WNT+I +       +
Sbjct: 499 CDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCN 558

Query: 446 LFVAML-----QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
           L + M+     +   PD  TM  ILP C+ LAA  +G+EIHG I + G+ +D  V N ++
Sbjct: 559 LGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLI 618

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           +MY KCG L  +  +F ++  KD+++WT +I+  GM+G G  A+  F +M  AGI PD V
Sbjct: 619 EMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHV 678

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+++++ACSHSGLV+EG  +F+ M+ +  IEP++EHYAC+VDLLSR+  L +A  FI  
Sbjct: 679 AFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILS 738

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ PD++IWG+LL  CR+  + ++A++V+E + EL PD+TGYYVL++NVYA   KW++V
Sbjct: 739 MPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQV 798

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
           + +R+ I  RGLKK+PGCSW+EI+ KV +F  G       +++  LL  L   M +EGY 
Sbjct: 799 RSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYI 858

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
              ++ L + DE EK   LCGHSE+LA+AFG+LN   G  ++V KNLRVC DCH + K++
Sbjct: 859 ANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYI 918

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK  +RE+++RD+NRFH FKDG CSC  +W
Sbjct: 919 SKIXQRELLVRDANRFHVFKDGACSCGDYW 948



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 219/425 (51%), Gaps = 20/425 (4%)

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           +V  WN +I     NG+  + L ++ E   +    D  T  +V++ CA        +++H
Sbjct: 138 NVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 197

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
              L   F  ++   N L+DMY +  DLD A +VFE+M  R VVSW S+I+GY   G ++
Sbjct: 198 DRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWN 257

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A+ ++      G+ PD Y ++S+L AC   G +E G  +H  I++  ++  + V+N L+
Sbjct: 258 EALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLL 317

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFEPDGVT 460
            MY K   + D   +F++M ++D VSWNTMI           ++ LF+ M+  F+PD +T
Sbjct: 318 SMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLT 377

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           +  IL AC  L  LE G+ +H Y++  G   D   +N +++MY KCG L+ ++ +F  + 
Sbjct: 378 ITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMK 437

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
            KD +SW  MI  Y  +G   +A+  F  M +  ++PD V+++ +L   +  G +  G  
Sbjct: 438 CKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLXLGKE 496

Query: 581 F---FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
                  M +  NI         +VD+ ++ G + ++ +  E M  A D   W +++  C
Sbjct: 497 LHCDLAKMGFNSNIVVS----NTLVDMYAKCGEMGDSLKVFENMK-ARDIITWNTIIASC 551

Query: 638 RIHHE 642
            +H E
Sbjct: 552 -VHSE 555


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  609 bits (1571), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 307/789 (38%), Positives = 476/789 (60%), Gaps = 52/789 (6%)

Query: 89  SEKSKIDTKTY----CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT 144
           SE++ I +  Y      +L+LC  +K L    ++  ++ ++G+  ++ +  +KLV +F  
Sbjct: 38  SERAHIPSHVYKHPAAVLLELCTSMKELH---QIIPLVIKNGLY-NEHLFQTKLVSLFSK 93

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
            G + E  RVF  ID+    +++ ++  Y+K  + + +L    +M+   +    Y F+ +
Sbjct: 94  YGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYL 153

Query: 205 LKCLA--------------VVGNS------------------RRVKDAHKLFDELSDRDV 232
           LK                 ++ NS                  R++ DA+K+FD + +RD+
Sbjct: 154 LKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDL 213

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           VSWN +I+G+  NG A+K LE+   M + G   D  T+VTVL   A+ G LM G+++H +
Sbjct: 214 VSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGY 273

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
           A++A F+K ++ +  L DMYSKCG ++ A  +F+ M +++VVSW SM+ GY + G  + A
Sbjct: 274 AIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKA 333

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
           I +F  M+ EGI+P    I   LHACA  G LE GK VH ++ + ++ S + V N+L+ M
Sbjct: 334 IAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISM 393

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTM 461
           Y+KC  +  A  +FN +  +  VSWN MI           AL+ F  M     +PD  TM
Sbjct: 394 YSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTM 453

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
             ++PA A L+     + IHG I+R  +  +  V  A+VDMY KCG + +AR LFDMI  
Sbjct: 454 VSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD 513

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           + +I+W  MI GYG HG G  A+  F+ M++  +EP++++++SV+ ACSHSGLVDEG R 
Sbjct: 514 RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRH 573

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           F  M+ +  +EP ++HY  MVDLL R G + EA+ FIE MP++P  T++G++L  C+IH 
Sbjct: 574 FKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHK 633

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
            +++ EK A+ +FEL PD  GY+VLLAN+YA   KW +V ++R+ + ++GLKK PGCS +
Sbjct: 634 NIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVV 693

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCG 761
           E++ +V+ F +G ++HP +K+I + L+ L  E+K  GY P T   L   D++++++ L  
Sbjct: 694 ELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQL-LNS 752

Query: 762 HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKD 821
           HSEKLA+AFG+LN   G TI V KNLRVCGDCH   K++S    REI++RD  RFHHFK+
Sbjct: 753 HSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKN 812

Query: 822 GRCSCRGFW 830
           G CSC  +W
Sbjct: 813 GICSCGDYW 821



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 240/503 (47%), Gaps = 51/503 (10%)

Query: 66  YNAEIGRFCEVGNLEKAMEVL----YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           Y+  +  + +  +LE A+  L    Y   K  +   TY  +L++C D   L+ GK++H  
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTY--LLKVCGDNADLKRGKEIHGQ 172

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +  +    +   + + +V M+  C  + +  ++F+++    +  WN ++  +S+ G  K+
Sbjct: 173 LITNSFAANVFAM-TGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVG----------------------------- 212
           +L L  +MQ  G   DS T   VL   A VG                             
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291

Query: 213 ---NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                  V+ A  +FD +  + VVSWN M+ GY+ NG  EK + VF++ML  G +    T
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           ++  L  CA+ G L  G+ VH F  +     +IS  N+L+ MYSKC  +D A  +F  + 
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            R+ VSW +MI GYA+ G    A+  F  M   G++PD + + S++ A A   +    K 
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKW 471

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-------- 441
           +H  I  + +  +++V+ AL+DMY+KCG++  A  +F+ +  + +++WN MI        
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGL 531

Query: 442 --GALDLFVAMLQN-FEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVAN 497
              ALDLF  M +   EP+ +T   ++ AC+    ++ G R        +G+    +   
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591

Query: 498 AIVDMYVKCGVLVLARSLFDMIP 520
           A+VD+  + G +  A    + +P
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMP 614



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 194/415 (46%), Gaps = 37/415 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  F + G  +KA+E++     E  + D+ T  ++L   AD+  L  GK +H   
Sbjct: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +G      +  + L  M+  CG ++  R +F+ +D   V  WN +M  Y + G  +++
Sbjct: 275 IRAGFAKLVNI-STALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKA 333

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK-------------------- 222
           + +F+KM   GI     T    L   A +G+  R K  HK                    
Sbjct: 334 IAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISM 393

Query: 223 ------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                       +F+ L+ R  VSWN MI GY  NG   + L  F EM +LG   D  TM
Sbjct: 394 YSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTM 453

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           V+V+   A        + +H   +++C  K I     L+DMYSKCG +  A ++F+ + +
Sbjct: 454 VSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD 513

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R V++W +MI GY   G+   A+ LF  M +  +EP+     S++ AC+  GL++ G   
Sbjct: 514 RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRH 573

Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD-IVSWNTMIGA 443
              +K++  ++ S+    A++D+  + G + +A      MP+   I  +  M+GA
Sbjct: 574 FKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGA 628


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 306/789 (38%), Positives = 474/789 (60%), Gaps = 52/789 (6%)

Query: 89  SEKSKIDTKTY----CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT 144
           SE++ I +  Y      +L+LC  +K L    ++  ++ ++G+  ++ +  +KLV +F  
Sbjct: 38  SERAHIPSHVYKHPAAVLLELCTSMKELH---QIIPLVIKNGLY-NEHLFQTKLVSLFSK 93

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
            G + E  RVF  ID+    +++ ++  Y+K  + + +L    +M+   +    Y F+ +
Sbjct: 94  YGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYL 153

Query: 205 LKCLA--------------VVGNS------------------RRVKDAHKLFDELSDRDV 232
           LK                 ++ NS                  R++ DA+K+FD + +RD+
Sbjct: 154 LKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDL 213

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           VSWN +I+G+  NG A+K LE+   M + G   D  T+VTVL   A+ G LM G+++H +
Sbjct: 214 VSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGY 273

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
           A++A F+K ++ +  L DMYSKCG ++ A  +F+ M +++VVSW SM+ GY + G  + A
Sbjct: 274 AIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKA 333

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
           I +F  M+ EGI+P    I   LHACA  G LE GK VH ++ + ++ S + V N+L+ M
Sbjct: 334 IAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISM 393

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTM 461
           Y+KC  +  A  +FN +  +  VSWN MI           AL+ F  M     +PD  TM
Sbjct: 394 YSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTM 453

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
             ++PA A L+     + IHG I+R  +  +  V  A+VDMY KCG + +AR LFDMI  
Sbjct: 454 VSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD 513

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           + +I+W  MI GYG HG G  A+  F+ M++  +EP++++++SV+ ACSHSGLVDEG R 
Sbjct: 514 RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRH 573

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           F  M+ +  +EP ++HY  MVDLL R G + EA+ FIE MP++P  T++G+    C+IH 
Sbjct: 574 FKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHK 633

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
            +++ EK A+ +FEL PD  GY+VLLAN+YA   KW +V ++R+ + ++GLKK PGCS +
Sbjct: 634 NIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVV 693

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCG 761
           E++ +V+ F +G ++HP +K+I + L+ L  E+K  GY P T   L   D++++++ L  
Sbjct: 694 ELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQL-LNS 752

Query: 762 HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKD 821
           HSEKLA+AFG+LN   G TI V KNLRVCGDCH   K++S    REI++RD  RFHHFK+
Sbjct: 753 HSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKN 812

Query: 822 GRCSCRGFW 830
           G CSC  +W
Sbjct: 813 GICSCGDYW 821



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 240/503 (47%), Gaps = 51/503 (10%)

Query: 66  YNAEIGRFCEVGNLEKAMEVL----YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           Y+  +  + +  +LE A+  L    Y   K  +   TY  +L++C D   L+ GK++H  
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTY--LLKVCGDNADLKRGKEIHGQ 172

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +  +    +   + + +V M+  C  + +  ++F+++    +  WN ++  +S+ G  K+
Sbjct: 173 LITNSFAANVFAM-TGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVG----------------------------- 212
           +L L  +MQ  G   DS T   VL   A VG                             
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291

Query: 213 ---NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                  V+ A  +FD +  + VVSWN M+ GY+ NG  EK + VF++ML  G +    T
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           ++  L  CA+ G L  G+ VH F  +     +IS  N+L+ MYSKC  +D A  +F  + 
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            R+ VSW +MI GYA+ G    A+  F  M   G++PD + + S++ A A   +    K 
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKW 471

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-------- 441
           +H  I  + +  +++V+ AL+DMY+KCG++  A  +F+ +  + +++WN MI        
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGL 531

Query: 442 --GALDLFVAMLQN-FEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVAN 497
              ALDLF  M +   EP+ +T   ++ AC+    ++ G R        +G+    +   
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591

Query: 498 AIVDMYVKCGVLVLARSLFDMIP 520
           A+VD+  + G +  A    + +P
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMP 614



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 188/402 (46%), Gaps = 36/402 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  F + G  +KA+E++     E  + D+ T  ++L   AD+  L  GK +H   
Sbjct: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +G      +  + L  M+  CG ++  R +F+ +D   V  WN +M  Y + G  +++
Sbjct: 275 IRAGFAKLVNI-STALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKA 333

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK-------------------- 222
           + +F+KM   GI     T    L   A +G+  R K  HK                    
Sbjct: 334 IAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISM 393

Query: 223 ------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                       +F+ L+ R  VSWN MI GY  NG   + L  F EM +LG   D  TM
Sbjct: 394 YSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTM 453

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           V+V+   A        + +H   +++C  K I     L+DMYSKCG +  A ++F+ + +
Sbjct: 454 VSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD 513

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R V++W +MI GY   G+   A+ LF  M +  +EP+     S++ AC+  GL++ G   
Sbjct: 514 RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRH 573

Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
              +K++  ++ S+    A++D+  + G + +A      MP+
Sbjct: 574 FKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPI 615


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 335/854 (39%), Positives = 492/854 (57%), Gaps = 56/854 (6%)

Query: 28  SYKPSTLPIIVSSKSHS-----SCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKA 82
           ++ P TL    + ++H      +  I+ + A++S + + +T+N   E+   C  GNLE+A
Sbjct: 24  NHNPKTLSFSKNLQTHKHTLRKTQEISVVGAAVSHSAIDQTQNL--ELRELCLQGNLEQA 81

Query: 83  MEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF 140
           M+ L S  + +I+ +   Y ++L+LC   ++ ++G +V+ ++  S   +    LG+ L+ 
Sbjct: 82  MKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVR-LGNALLS 140

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           MFV  G+L +   VF K+    VF WN+L+  Y+K G F E+L L+ +M    I  + YT
Sbjct: 141 MFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYT 200

Query: 201 FSCVLKCLAVVGNSRRVKDAHK--------------------------------LFDELS 228
           F  VLK  A V +  R K+ H                                 LFD++ 
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMP 260

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            RD +SWN MISGY  NG   +GLE+F  M  L  + DL TM TV S C        GR 
Sbjct: 261 KRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRG 320

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VH + +K+ F  +IS NN+L+ MYS  G L+ A  VF +M  + VVSWT+MIA      +
Sbjct: 321 VHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKL 380

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+  ++ M  EGI PD   + S+L ACAC G L++G  +H+   +  + S + VSN+
Sbjct: 381 PFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNS 440

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFEPDG 458
           L+DMY+KC  + +A  VF  +  K++VSW ++I           AL  F  M ++ +P+ 
Sbjct: 441 LIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNS 500

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           VT+  +L ACA + AL RG+EIH + LR G+  D  + NAI+DMYV+CG  V A + F+ 
Sbjct: 501 VTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS 560

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
              KD+ +W I++ GY   G    A+  F+ M +  I PDE++FIS+L ACS SG+V EG
Sbjct: 561 -QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEG 619

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
             +FN+M+ + N+ P L+HYAC+VD+L R G L +AY FI+ MP+ PDA IWG+LL  CR
Sbjct: 620 LEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACR 679

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
           IH  V+L E  A+ VFE +  + GYY+LL N+YA    W++V K+R  +  RGL  +PGC
Sbjct: 680 IHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGC 739

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           SW+EIKGKV+ F++G +SH  +K+I  +L     +MK  G F   + +  +  E  +   
Sbjct: 740 SWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENG-FGNLKSSFTSEIESSRADI 798

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
            CGHSE+ A+AFG++N   G  I VTKNL +C  CH M KF+S   RREI +RD   +HH
Sbjct: 799 FCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHH 858

Query: 819 FKDGRCSC--RGFW 830
           FKDG CSC   G+W
Sbjct: 859 FKDGVCSCGDEGYW 872


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 334/854 (39%), Positives = 491/854 (57%), Gaps = 56/854 (6%)

Query: 28  SYKPSTLPIIVSSKSHS-----SCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKA 82
           ++ P TL    + ++H      +  I+ + A++S + + +T+N   E+   C  GNLE+A
Sbjct: 24  NHNPKTLSFSKNLQTHKHTLRKTQEISVVGAAVSHSAIDQTQNL--ELRELCLQGNLEQA 81

Query: 83  MEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF 140
           M+ L S  + +I+ +   Y ++L+LC   ++ ++G +V+ ++  S   +    LG+ L+ 
Sbjct: 82  MKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVR-LGNALLS 140

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           MFV  G+L +   VF K+    VF WN+L+  Y+K G F E+L L+ +M    I  + YT
Sbjct: 141 MFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYT 200

Query: 201 FSCVLKCLAVVGNSRRVKDAHK--------------------------------LFDELS 228
           F  VLK  A V +  R K+ H                                 LFD++ 
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMP 260

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            RD +SWN MISGY  NG   +GLE+F  M  L  + DL TM TV S C        GR 
Sbjct: 261 KRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRG 320

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VH + +K+ F  +IS NN+L+ MYS  G L+ A  VF +M  + VVSWT+MIA      +
Sbjct: 321 VHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKL 380

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+  ++ M  EGI PD   + S+L ACAC G L++G  +H+   +  + S + VSN+
Sbjct: 381 PFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNS 440

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFEPDG 458
           L+DMY+KC  + +A  VF  +  K++VSW ++I           AL  F  M ++ +P+ 
Sbjct: 441 LIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNS 500

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           VT+  +L ACA + AL RG+EIH + LR G+  D  + NAI+DMYV+CG  V A + F+ 
Sbjct: 501 VTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS 560

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
              KD+ +W I++ GY   G    A+  F+ M +  I PDE++FIS+L ACS SG+V EG
Sbjct: 561 -QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEG 619

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
             +FN+M+ + N+ P L+HYAC+VD+L R G L +AY FI+ MP+ PDA IWG+LL  CR
Sbjct: 620 LEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACR 679

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
           IH  V+L E  A+ VFE +  + GYY+LL N+YA    W++V K+R  +  RGL  +PGC
Sbjct: 680 IHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGC 739

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           SW+EIKGKV+ F++G +SH  +K+I  +L     +MK  G F   + +  +  E  +   
Sbjct: 740 SWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENG-FGNLKSSFTSEIESSRADI 798

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
            CGHSE+ A+AFG++N   G  I V KNL +C  CH M KF+S   RREI +RD   +HH
Sbjct: 799 FCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHH 858

Query: 819 FKDGRCSC--RGFW 830
           FKDG CSC   G+W
Sbjct: 859 FKDGVCSCGDEGYW 872


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 334/880 (37%), Positives = 500/880 (56%), Gaps = 70/880 (7%)

Query: 6   AKITTNFLFFSPPNQSYGKKFASYKPSTLPI--------IVSSKSHSSCTINPISASISK 57
           AKI    L  + PN  + K   ++KP  L          I   K H    +NP S +   
Sbjct: 5   AKIPAIHLQTNLPNPHHSK---THKPKPLNFSRNIQTRQISLRKHHEISVLNPSSIT--- 58

Query: 58  TLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDG 115
                 +N N+ I   C  G+LEKA+  L S ++ ++  + +TY ++L+LC   ++  +G
Sbjct: 59  -----AQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEG 113

Query: 116 KKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
            +VHS +  S  V   GV LG+ L+ MFV  GDL E   VF K+    +F WN+L+  Y+
Sbjct: 114 SRVHSYV--SKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYA 171

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK------------ 222
           K G F E+L L+ +M  +GI  D YTF CVL+    + +  R ++ H             
Sbjct: 172 KAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVD 231

Query: 223 --------------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                               +FD +  RD +SWN MISGY  N V  +GL +F  M    
Sbjct: 232 VVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFF 291

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
            + DL TM +V+S C   G    GR VH + +K  F  E+S NN+L+ M+S  G  D A 
Sbjct: 292 VDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAE 351

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
            VF KM  + +VSWT+MI+GY + G+ + A+  +  M  EG+ PD   I S+L ACA  G
Sbjct: 352 MVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLG 411

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
           LL+ G  +H++     + S + V+N+L+DMY+KC  +  A  VF+++P K+++SW ++I 
Sbjct: 412 LLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIIL 471

Query: 443 ALDL----------FVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
            L L          F  M+ + +P+ VT+  +L ACA + AL  G+EIH + LR G+  D
Sbjct: 472 GLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFD 531

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             + NA++DMYV+CG +  A + F+    KD+ SW I++ GY   G G  A+  F+ M +
Sbjct: 532 GFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIE 590

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           + + PDE++F S+L ACS SG+V +G  +F  M ++ +I P L+HYA +VDLL R G L 
Sbjct: 591 SDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLE 650

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           +AY FI+ MP+ PD  IWG+LL  CRI+  V+L E  A+H+FE++  + GYY+LL N+YA
Sbjct: 651 DAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYA 710

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
           ++ KW+EV ++R+ +    L  +PGCSW+E+ G+V+ F+ G   HP  K+I ++L+    
Sbjct: 711 DSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYE 770

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
           +M+  G          + D  + E+  CGHSE+LA+AFG++N   G  I VTKNL +C +
Sbjct: 771 KMEATGLSMSKDSRRDDIDASKAEI-FCGHSERLAIAFGLINTVPGTPIWVTKNLYMCEN 829

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC--RGFW 830
           CH   KF+SK  RR I +RD+ +FHHFKDG CSC   G+W
Sbjct: 830 CHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 292/720 (40%), Positives = 441/720 (61%), Gaps = 44/720 (6%)

Query: 155 FNKID-NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA---- 209
           F + D      +W   +  Y K G + ++L L+ +MQ  GI  D   F  V+K       
Sbjct: 76  FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135

Query: 210 --------------------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISG 241
                               +VG +          +++A ++FD +  RDVVSWN +I+G
Sbjct: 136 LQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAG 195

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y  NG   + L +F EM   G   + +T+V+V+  CA+  AL  G+ +H +A+++    +
Sbjct: 196 YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESD 255

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +   N L++MY+KCG+++ A ++FE+M  R V SW ++I GY+       A+  F  M  
Sbjct: 256 VLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQV 315

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
            GI+P+   + S+L ACA    LE G+ +H Y   +  +S+  V NAL++MYAKCG++  
Sbjct: 316 RGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNS 375

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACAS 470
           A  +F +MP K++V+WN +I           AL LF+ M  Q  +PD   +  +LPACA 
Sbjct: 376 AYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAH 435

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
             ALE+G++IHGY +R G  ++  V   +VD+Y KCG +  A+ LF+ +P +D++SWT M
Sbjct: 436 FLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTM 495

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I  YG+HG G DA+A F+ M++ G + D ++F ++L ACSH+GLVD+G ++F  M+ +  
Sbjct: 496 ILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYG 555

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           + PKLEHYAC+VDLL R G+L EA   I+ M + PDA +WG+LL  CRIH  ++L E+ A
Sbjct: 556 LAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAA 615

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
           +H+FEL+PDN GYYVLL+N+YAEA++WE+V KLR+ +  +G+KK PGCS + +   V  F
Sbjct: 616 KHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTF 675

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
           + G  +HP +++I ++L+ L  +M++ GY P T  AL + +E  KE  L  HSEKLA++F
Sbjct: 676 LVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISF 735

Query: 771 GILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           GI+N   G  IR+ KNLRVC DCH   KF+SK   REI++RD+NRFHH K+G CSC  +W
Sbjct: 736 GIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 162/513 (31%), Positives = 258/513 (50%), Gaps = 55/513 (10%)

Query: 21  SYGKKFASYKPSTLP---IIVSSKSHSSCTINPISASISKTLVCKTKNYN------AEIG 71
           SY   F  Y PS LP   ++   + +   T   +SA  ++T   +T   N        I 
Sbjct: 34  SYHVCFYFYGPSPLPTSTVVAQLRRNKVKTTREVSACANQTQFTQTDIRNNAVVWKETII 93

Query: 72  RFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVI 129
            + + G   KA+ + Y  +++ I  D   + S+++ C     L+ G+KVH  I   G   
Sbjct: 94  GYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFE- 152

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
            D ++G+ L  M+  CG L+  R+VF+++    V  WN ++  YS+ G   E+L LF +M
Sbjct: 153 SDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEM 212

Query: 190 QSLGIAADSYTFSCVLK---------------CLAV-----------------VGNSRRV 217
           Q  GI  +S T   V+                C A+                       V
Sbjct: 213 QVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNV 272

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
             AHKLF+ +  RDV SWN +I GY  N    + L  F  M   G   +  TMV+VL  C
Sbjct: 273 NTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPAC 332

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A+  AL  G+ +H +A+++ F       N L++MY+KCG+++ A ++FE+M +++VV+W 
Sbjct: 333 AHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWN 392

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           ++I+GY++ G    A+ LF  M  +GI+PD +AI S+L ACA    LE GK +H Y   +
Sbjct: 393 AIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRS 452

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLF 447
             +S++ V   L+D+YAKCG++  A+ +F +MP +D+VSW TMI           AL LF
Sbjct: 453 GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALF 512

Query: 448 VAMLQN-FEPDGVTMACILPACASLAALERGRE 479
             M +   + D +    IL AC+    +++G +
Sbjct: 513 SKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ 545



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 206/415 (49%), Gaps = 37/415 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + + G   +A+ +    + + I  ++ T  S++ +CA L +LE GK++H   
Sbjct: 188 SWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYA 247

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SGI  D  V+   LV M+  CG++    ++F ++    V  WN ++  YS      E+
Sbjct: 248 IRSGIESDVLVVNG-LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEA 306

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR--- 215
           L  F +MQ  GI  +S T   VL   A                        VVGN+    
Sbjct: 307 LAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNM 366

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 V  A+KLF+ +  ++VV+WN +ISGY  +G   + L +F EM   G   D   +
Sbjct: 367 YAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAI 426

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           V+VL  CA+  AL  G+ +H + +++ F   +     L+D+Y+KCG+++ A ++FE+M E
Sbjct: 427 VSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPE 486

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVSWT+MI  Y   G  + A+ LF  M   G + D  A T+IL AC+  GL++ G   
Sbjct: 487 QDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQY 546

Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
              +K +  +   L     L+D+  + G + +A  +   M ++ D   W  ++GA
Sbjct: 547 FQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGA 601



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 154/375 (41%), Gaps = 69/375 (18%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K ++ T  S+L  CA L +LE G+++H     SG   +D V+G+ LV M+  CG++    
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESND-VVGNALVNMYAKCGNVNSAY 377

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--- 209
           ++F ++    V  WN ++  YS+ G+  E+L LF +MQ+ GI  DS+    VL   A   
Sbjct: 378 KLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFL 437

Query: 210 ---------------------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMIS 240
                                VVG            V  A KLF+ + ++DVVSW  MI 
Sbjct: 438 ALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMIL 497

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFS 299
            Y  +G  E  L +F +M   G  +D      +L+ C++ G +  G +           +
Sbjct: 498 AYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLA 557

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            ++     L+D+  + G LD A  + + M                               
Sbjct: 558 PKLEHYACLVDLLGRAGHLDEANGIIKNM------------------------------- 586

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
               +EPD     ++L AC     +E+G+    ++ E D  ++ Y    L ++YA+    
Sbjct: 587 ---SLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYV-LLSNIYAEAQRW 642

Query: 420 ADAESVFNQMPVKDI 434
            D   +   M  K +
Sbjct: 643 EDVAKLRKMMKEKGV 657


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 307/811 (37%), Positives = 466/811 (57%), Gaps = 47/811 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +G + +    E+A  +      +  K D  T+  +L  CAD K+++ G ++ S+I
Sbjct: 172 SWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLI 231

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +G   D  V G+ L+ M + CG + +  +VFN +    +  W  ++   ++   FK++
Sbjct: 232 LNAGWDTDLFV-GTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQA 290

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC--------------------------------LAV 210
             LF+ M+  G+  D   F  +LK                                 L++
Sbjct: 291 CNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSM 350

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 ++DA ++F+ +  R+VVSW  MI+G+  +G  E+    F +M+  G   +  T 
Sbjct: 351 YTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTF 410

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           +++L  C+   AL  GR +H   +KA +  +      LL MY+KCG L  A  VFE++ +
Sbjct: 411 MSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISK 470

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           ++VV+W +MI  Y +   +D A+  F+ +++EGI+PD    TSIL+ C     LE+GK V
Sbjct: 471 QNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWV 530

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
              I     +S L++ NAL+ M+  CG +  A ++FN MP +D+VSWNT+I         
Sbjct: 531 QSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGEN 590

Query: 443 --ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             A D F  M ++  +PD +T   +L ACAS  AL  GR +H  I    +  D  V   +
Sbjct: 591 QFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGL 650

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + MY KCG +  A  +F  +P K++ SWT MI GY  HG G +A+  F  M+Q G++PD 
Sbjct: 651 ISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDW 710

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           ++F+  L AC+H+GL+ EG   F  M+ + NIEP++EHY CMVDL  R G L EA  FI 
Sbjct: 711 ITFVGALSACAHAGLIKEGLHHFESMK-DFNIEPRMEHYGCMVDLFGRAGLLHEAVEFIN 769

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            M V PD+ +WG+LL  C++H +V+LAEKVA+   EL+P++ G YV+L+N+YA A  W+E
Sbjct: 770 KMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKE 829

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V K+R+ +  RG+ K PG SWIE+ G+V+IF +   +HP  ++I + L RL +EMK+ GY
Sbjct: 830 VTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGY 889

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P TRY L + ++ EKE ALC HSE+LA+A+G+L  P    I ++KNLRVCGDCH   K 
Sbjct: 890 VPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKL 949

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +SK  +R+I+ RDSNRFHHFKDG CSC  FW
Sbjct: 950 ISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 202/668 (30%), Positives = 318/668 (47%), Gaps = 92/668 (13%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T+  NA + R  + G L +AM VL S  S   +I  +TY S+LQLC   K+L DG+++H+
Sbjct: 69  TQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHN 128

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            I  S I  D                                +F+WN+L+  Y+K GN  
Sbjct: 129 HIKFSKIQPD--------------------------------IFMWNMLISMYAKCGN-- 154

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                                  A ++FDE+ D+DV SWN ++ 
Sbjct: 155 ------------------------------------TNSAKQIFDEMPDKDVYSWNLLLG 178

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY+ +   E+   + ++M+  G   D  T V +L+ CA+   +  G  + +  L A +  
Sbjct: 179 GYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDT 238

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++     L++M+ KCG +D A++VF  +  R +++WTSMI G AR   F  A  LF+ M 
Sbjct: 239 DLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVME 298

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
            EG++PD  A  S+L AC     LE GK VH  +KE  + + +YV  AL+ MY KCGSM 
Sbjct: 299 EEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSME 358

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACA 469
           DA  VFN +  +++VSW  MI           A   F  M+++  EP+ VT   IL AC+
Sbjct: 359 DALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACS 418

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
             +AL++GR+IH  I++ G   D  V  A++ MY KCG L+ AR++F+ I  +++++W  
Sbjct: 419 RPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNA 478

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           MI  Y  H    +A+ATF  + + GI+PD  +F S+L  C     ++ G ++   +    
Sbjct: 479 MITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRA 537

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
             E  L     +V +    G+L  A      MP   D   W +++ G   H E + A   
Sbjct: 538 GFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHGENQFAFDY 596

Query: 650 AEHVFE--LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
            + + E  ++PD   +  LL N  A  E   E ++L   I+   L     C  +   G +
Sbjct: 597 FKMMQESGVKPDQITFTGLL-NACASPEALTEGRRLHALITEAALD----CDVVVGTGLI 651

Query: 708 NIFVAGGS 715
           +++   GS
Sbjct: 652 SMYTKCGS 659


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 332/874 (37%), Positives = 497/874 (56%), Gaps = 68/874 (7%)

Query: 6   AKITTNFLFFSPPNQSYGKKFASYKPSTLPI--------IVSSKSHSSCTINPISASISK 57
           AKI    L  + PN  + K   ++KP  L          I   K H    +NP S +   
Sbjct: 5   AKIPAIHLQTNLPNPHHSK---THKPKPLNFSRNIQTRQISLRKHHEISVLNPSSIT--- 58

Query: 58  TLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDG 115
                 +N N+ I   C  G+LEKA+  L S ++ ++  + +TY ++L+LC   ++  +G
Sbjct: 59  -----AQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEG 113

Query: 116 KKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
            +VHS +  S  V   GV LG+ L+ MFV  GDL E   VF K+    +F WN+L+  Y+
Sbjct: 114 SRVHSYV--SKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYA 171

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK------------ 222
           K G F E+L L+ +M  +GI  D YTF CVL+    + +  R ++ H             
Sbjct: 172 KAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVD 231

Query: 223 --------------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                               +FD +  RD +SWN MISGY  N V  +GL +F  M    
Sbjct: 232 VVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFF 291

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
            + DL TM +V+S C   G    GR VH + +K  F  E+S NN+L+ M+S  G  D A 
Sbjct: 292 VDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAE 351

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
            VF KM  + +VSWT+MI+GY + G+ + A+  +  M  EG+ PD   I S+L ACA  G
Sbjct: 352 MVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLG 411

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
           LL+ G  +H++     + S + V+N+L+DMY+KC  +  A  VF+++P K+++SW ++I 
Sbjct: 412 LLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIIL 471

Query: 443 ALDL----------FVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
            L L          F  M+ + +P+ VT+  +L ACA + AL  G+EIH + LR G+  D
Sbjct: 472 GLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFD 531

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             + NA++DMYV+CG +  A + F+    KD+ SW I++ GY   G G  A+  F+ M +
Sbjct: 532 GFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIE 590

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           + + PDE++F S+L ACS SG+V +G  +F  M ++ +I P L+HYA +VDLL R G L 
Sbjct: 591 SDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLE 650

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           +AY FI+ MP+ PD  IWG+LL  CRI+  V+L E  A+H+FE++  + GYY+LL N+YA
Sbjct: 651 DAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYA 710

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
           ++ KW+EV ++R+ +    L  +PGCSW+E+ G+V+ F+ G   HP  K+I ++L+    
Sbjct: 711 DSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYE 770

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
           +M+  G          + D  + E+  CGHSE+LA+AFG++N   G  I VTKNL +C +
Sbjct: 771 KMEATGLSMSKDSRRDDIDASKAEI-FCGHSERLAIAFGLINTVPGTPIWVTKNLYMCEN 829

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           CH   KF+SK  RR I +RD+ +FHHFKDG CSC
Sbjct: 830 CHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSC 863


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 315/810 (38%), Positives = 449/810 (55%), Gaps = 46/810 (5%)

Query: 66   YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
            YNA I    + G+ E+A E  Y   S+   ++  TY S+L  C+  K+L  G+ +HS I 
Sbjct: 353  YNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHIS 412

Query: 124  ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            E G    D  +G+ L+ M+  CGDL   R +FN +    +  WN ++  Y++  +  E++
Sbjct: 413  EVGHS-SDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAM 471

Query: 184  YLFKKMQSLGIAADSYTFSCVLKCL-----------------------------AVVGNS 214
             L+K+MQS G+     TF  +L                                A++   
Sbjct: 472  KLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMY 531

Query: 215  RR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
            RR   + +A  +F+    RD++SWN MI+G+  +G  E   ++F EM   G   D  T  
Sbjct: 532  RRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFA 591

Query: 272  TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
            +VL GC N  AL  GR +H   +++    +++  N L++MY +CG L  A  VF  +  R
Sbjct: 592  SVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR 651

Query: 332  SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            +V+SWT+MI G+A +G    A  LF  M  +G +P     +SIL AC     L+ GK V 
Sbjct: 652  NVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVI 711

Query: 392  DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFV 448
             +I  +  +    V NAL+  Y+K GSM DA  VF++MP +DI+SWN MI       L  
Sbjct: 712  AHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGG 771

Query: 449  AMLQ---NFEPDGVTM-----ACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
              LQ     +  GV +       IL AC+S +ALE G+ +H  I++  +  D  V  A++
Sbjct: 772  TALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALI 831

Query: 501  DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
             MY KCG L  A+ +FD    K++++W  MI  Y  HG    A+  FN M + GI+PD  
Sbjct: 832  SMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGS 891

Query: 561  SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
            +F S+L AC+HSGLV EG R F+ +  +  + P +EHY C+V LL R G   EA   I  
Sbjct: 892  TFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQ 951

Query: 621  MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
            MP  PDA +W +LL  CRIH  V LAE  A +  +L   N   YVLL+NVYA A +W++V
Sbjct: 952  MPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDV 1011

Query: 681  KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
             K+R  +  RG++K PG SWIE+   ++ F+A   SHP   +I   LKRL LEM+R GY 
Sbjct: 1012 AKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYS 1071

Query: 741  PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
            P T+Y L N D+  +E +LC HSE+LA+A+G+L  P G  IR+ KNLR+CGDCH  +KF+
Sbjct: 1072 PDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFI 1131

Query: 801  SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            SK   REI+ RDSNRFH FK+G+CSC  FW
Sbjct: 1132 SKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161



 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 178/595 (29%), Positives = 308/595 (51%), Gaps = 47/595 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +YN  +G + +   +E+ + +    SSE    D  TY ++L        L++GK++H + 
Sbjct: 251 SYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLA 310

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G+  D  V G+ L  MFV CGD+   ++      +  V ++N L+   ++ G+++E+
Sbjct: 311 VNEGLNSDIRV-GTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEA 369

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC----------------LAVVGNSRRVK-------- 218
              + +M+S G+  +  T+  VL                  ++ VG+S  V+        
Sbjct: 370 FEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISM 429

Query: 219 --------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                    A +LF+ +  RD++SWN +I+GY       + ++++K+M + G      T 
Sbjct: 430 YARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTF 489

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           + +LS C N  A   G+ +H   L++         N L++MY +CG +  A  VFE    
Sbjct: 490 LHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRA 549

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R ++SW SMIAG+A+ G ++ A +LF  M +EG+EPD     S+L  C     LE+G+ +
Sbjct: 550 RDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQI 609

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I E+ +Q  + + NAL++MY +CGS+ DA  VF+ +  ++++SW  MIG        
Sbjct: 610 HMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGED 669

Query: 443 --ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             A +LF  M  + F+P   T + IL AC S A L+ G+++  +IL  G   D  V NA+
Sbjct: 670 RKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNAL 729

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           +  Y K G +  AR +FD +P +D++SW  MIAGY  +G G  A+     M++ G+  ++
Sbjct: 730 ISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNK 789

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
            SF+S+L ACS    ++EG R    +  +  ++  +   A ++ + ++ G+L EA
Sbjct: 790 FSFVSILNACSSFSALEEGKRVHAEI-VKRKMQGDVRVGAALISMYAKCGSLEEA 843



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 162/572 (28%), Positives = 288/572 (50%), Gaps = 45/572 (7%)

Query: 87  YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG 146
           Y    ++ +   Y  ++Q C   +SL + K++H+ + E+G V  D  L + L+ M+V C 
Sbjct: 73  YQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAG-VGPDIFLSNLLINMYVKCR 131

Query: 147 DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
            + +  +VF K+    V  WN L+  Y++ G  K++  LF++MQ+ G      T+  +L 
Sbjct: 132 SVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILT 191

Query: 207 C--------------------------------LAVVGNSRRVKDAHKLFDELSDRDVVS 234
                                            L + G    +  A ++F  +  RDVVS
Sbjct: 192 ACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVS 251

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           +N M+  Y      E+ + +F +M + G   D  T + +L        L  G+ +H  A+
Sbjct: 252 YNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAV 311

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
               + +I     L  M+ +CGD+ GA +  E   +R VV + ++IA  A+ G ++ A  
Sbjct: 312 NEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFE 371

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
            +  M  +G+  +     S+L+AC+    L  G+ +H +I E    S + + N+L+ MYA
Sbjct: 372 QYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYA 431

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMAC 463
           +CG +  A  +FN MP +D++SWN +I           A+ L+  M  +  +P  VT   
Sbjct: 432 RCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLH 491

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           +L AC + +A   G+ IH  ILR GI ++ ++ANA+++MY +CG ++ A+++F+   A+D
Sbjct: 492 LLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARD 551

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           +ISW  MIAG+  HG    A   F +M++ G+EPD+++F SVL  C +   ++ G R  +
Sbjct: 552 IISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELG-RQIH 610

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           M+  E  ++  +     ++++  R G+L +AY
Sbjct: 611 MLIIESGLQLDVNLGNALINMYIRCGSLQDAY 642



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 211/444 (47%), Gaps = 16/444 (3%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            + A  V ++  C    +L   + +HA  ++A    +I  +N L++MY KC  +  A +V
Sbjct: 80  TNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQV 139

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F KM  R V+SW S+I+ YA++G    A +LF  M   G  P      SIL AC     L
Sbjct: 140 FLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAEL 199

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
           E GK +H  I E   Q    V N+L++MY KC  +  A  VF+ +  +D+VS+NTM+G  
Sbjct: 200 EYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLY 259

Query: 443 --------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                    + LF  M  +   PD VT   +L A  + + L+ G+ IH   +  G+++D 
Sbjct: 260 AQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDI 319

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            V  A+  M+V+CG +  A+   +    +D++ +  +IA    HG   +A   +  MR  
Sbjct: 320 RVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSD 379

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G+  +  +++SVL ACS S  +  G    + +  E      ++    ++ + +R G+L  
Sbjct: 380 GVVMNRTTYLSVLNACSTSKALGAGELIHSHIS-EVGHSSDVQIGNSLISMYARCGDLPR 438

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLANVY 671
           A      MP   D   W +++ G     +   A K+ + +    ++P    +  LL+   
Sbjct: 439 ARELFNTMP-KRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSAC- 496

Query: 672 AEAEKWEEVKKLREKISRRGLKKN 695
             +  + + K + E I R G+K N
Sbjct: 497 TNSSAYSDGKMIHEDILRSGIKSN 520



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 15/276 (5%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            ++N  I  + + G    A++  Y  ++  +  +  ++ SIL  C+   +LE+GK+VH+ I
Sbjct: 756  SWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEI 815

Query: 123  CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +  +  D  V G+ L+ M+  CG L+E + VF+      V  WN +++ Y++ G   ++
Sbjct: 816  VKRKMQGDVRV-GAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKA 874

Query: 183  LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNC 237
            L  F  M   GI  D  TF+ +   L+   +S  V + +++F  L  +  +S     + C
Sbjct: 875  LDFFNCMDKEGIKPDGSTFTSI---LSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGC 931

Query: 238  MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
            ++ G +  G A +  E    +  + F  D A   T+L  C   G +         ALK  
Sbjct: 932  LV-GLL--GRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALK-L 987

Query: 298  FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
             ++  +    L ++Y+  G  D   ++   M  R +
Sbjct: 988  NARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGI 1023


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 308/811 (37%), Positives = 469/811 (57%), Gaps = 46/811 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  + + G +EKA+++L   ++  +  D  T  S L  C    +LE G+++H   
Sbjct: 93  SWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQA 152

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G++ D  V  + ++ M+  CG ++E R VF+K++   V  W + +  Y+  G  + +
Sbjct: 153 MQAGLLFDVKV-ANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETA 211

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS---- 214
             +F+KM+  G+  +  T+  VL   +                         VG +    
Sbjct: 212 FEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKM 271

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                  KD  ++F++L +RD+++WN MI G    G  E+  EV+ +M   G   +  T 
Sbjct: 272 YAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITY 331

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           V +L+ C N  AL +G+ +H+   KA F+ +I   N L+ MYS+CG +  A  VF+KM  
Sbjct: 332 VILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVR 391

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + V+SWT+MI G A+ G    A+ +++ M + G+EP+    TSIL+AC+    LE G+ +
Sbjct: 392 KDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRI 451

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  + E  + +  +V N L++MY+ CGS+ DA  VF++M  +DIV++N MIG        
Sbjct: 452 HQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLG 511

Query: 443 --ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL LF  + +   +PD VT   +L ACA+  +LE  REIH  + + G  +D +V NA+
Sbjct: 512 KEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNAL 571

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           V  Y KCG    A  +F+ +  +++ISW  +I G   HG G DA+  F  M+  G++PD 
Sbjct: 572 VSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDI 631

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+F+S+L ACSH+GL++EG R+F  M  +  I P +EHY CMVDLL R G L EA   I+
Sbjct: 632 VTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIK 691

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP   +  IWG+LL  CRIH  V +AE+ AE   +L+ DN   YV L+++YA A  W+ 
Sbjct: 692 TMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDS 751

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
             KLR+ + +RG+ K PG SWI++  K++ FVA   SHP ++KI + L RL   MK +GY
Sbjct: 752 AAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGY 811

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P TR  + + DE EKE A+C HSE+LA+A+G+++ P G  I + KNLRVC DCH   KF
Sbjct: 812 VPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTATKF 871

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +SK   REI+ RD NRFHHFKDG CSC  +W
Sbjct: 872 ISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 184/631 (29%), Positives = 327/631 (51%), Gaps = 56/631 (8%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
             + +++++  Y  +L+ C ++K L  G++VH  I +   V D   + + L+ M++ CG 
Sbjct: 15  QQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA-LINMYIQCGS 73

Query: 148 LKEGRRVFNKID--NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF---- 201
           ++E R+V+ K+      V  WN ++  Y + G  +++L L ++MQ  G+A D  T     
Sbjct: 74  IEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFL 133

Query: 202 -------------------------------SCVLKCLAVVGNSRRVKDAHKLFDELSDR 230
                                          +C+L   A  G+   +++A ++FD++  +
Sbjct: 134 SSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGS---IEEAREVFDKMEKK 190

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
            VVSW   I GY   G +E   E+F++M   G   +  T ++VL+  ++  AL +G+AVH
Sbjct: 191 SVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVH 250

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
           +  L A    + +    L+ MY+KCG      +VFEK+  R +++W +MI G A  G ++
Sbjct: 251 SRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWE 310

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A  ++  M REG+ P+      +L+AC     L  GK++H  + +    S + V NAL+
Sbjct: 311 EASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALI 370

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGV 459
            MY++CGS+ DA  VF++M  KD++SW  MIG          AL ++  M Q   EP+ V
Sbjct: 371 SMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRV 430

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           T   IL AC+S AALE GR IH  ++  G++ D +V N +V+MY  CG +  AR +FD +
Sbjct: 431 TYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM 490

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
             +D++++  MI GY  H  G +A+  F+ +++ G++PD+V++I++L AC++SG ++   
Sbjct: 491 IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAR 550

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
               ++R +            +V   ++ G+ S+A    E M    +   W +++ G   
Sbjct: 551 EIHTLVR-KGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKM-TKRNVISWNAIIGGSAQ 608

Query: 640 HHEVKLAEKVAEHVF--ELEPDNTGYYVLLA 668
           H   + A ++ E +    ++PD   +  LL+
Sbjct: 609 HGRGQDALQLFERMKMEGVKPDIVTFVSLLS 639



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 170/511 (33%), Positives = 282/511 (55%), Gaps = 21/511 (4%)

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS--DRDVVSWNCMISGYIANGVAEKGLEV 254
           D YT + ++      G+   +++A +++ +LS  +R V SWN M+ GYI  G  EK L++
Sbjct: 57  DQYTVNALINMYIQCGS---IEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKL 113

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
            ++M   G   D  T+++ LS C + GAL +GR +H  A++A    ++   N +L+MY+K
Sbjct: 114 LRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAK 173

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
           CG ++ A  VF+KM ++SVVSWT  I GYA  G  + A  +F+ M +EG+ P+     S+
Sbjct: 174 CGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISV 233

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L+A +    L+ GK VH  I     +S   V  AL+ MYAKCGS  D   VF ++  +D+
Sbjct: 234 LNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDL 293

Query: 435 VSWNTMIGAL----------DLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGY 483
           ++WNTMIG L          +++  M  +   P+ +T   +L AC + AAL  G+EIH  
Sbjct: 294 IAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSR 353

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
           + + G ++D  V NA++ MY +CG +  AR +FD +  KD+ISWT MI G    GFG +A
Sbjct: 354 VAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEA 413

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           +  + +M+QAG+EP+ V++ S+L ACS    ++ G R    +  E  +         +V+
Sbjct: 414 LTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQV-VEAGLATDAHVGNTLVN 472

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNT 661
           + S  G++ +A +  + M +  D   + +++ G   H+  K A K+ + + E  L+PD  
Sbjct: 473 MYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKV 531

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
            Y  +L N  A +   E  +++   + + G 
Sbjct: 532 TYINML-NACANSGSLEWAREIHTLVRKGGF 561



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 175/367 (47%), Gaps = 26/367 (7%)

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
           DGA+ + + + ++G + +      +L  C     L  G+ VH +I ++      Y  NAL
Sbjct: 5   DGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNAL 64

Query: 410 MDMYAKCGSMADAESVFNQMPV--KDIVSWNTMI----------GALDLFVAMLQN-FEP 456
           ++MY +CGS+ +A  V+ ++    + + SWN M+           AL L   M Q+   P
Sbjct: 65  INMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAP 124

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           D  T+   L +C S  ALE GREIH   ++ G+  D  VAN I++MY KCG +  AR +F
Sbjct: 125 DRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVF 184

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           D +  K ++SWTI I GY   G    A   F  M Q G+ P+ +++ISVL A S    + 
Sbjct: 185 DKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALK 244

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            G +  +        E        +V + ++ G+  +  +  E + V  D   W +++ G
Sbjct: 245 WG-KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGG 302

Query: 637 CRIHHEVKLAEKVAEHVFELE-----PDNTGYYVLL-ANVYAEAEKWEEVKKLREKISRR 690
                E    E+ +E   +++     P+   Y +LL A V + A  W   K++  ++++ 
Sbjct: 303 LA---EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWG--KEIHSRVAKA 357

Query: 691 GLKKNPG 697
           G   + G
Sbjct: 358 GFTSDIG 364


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 318/813 (39%), Positives = 483/813 (59%), Gaps = 49/813 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            +NA IG +   G    ++E+      S I  D  T+  IL+ C  LK    G +VH + 
Sbjct: 147 TWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLA 206

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFIWNLLMHEYSKTGNFKE 181
            + G V    V  S +V M+  C DL   R++F+++ +   V  WN ++  YS  G   E
Sbjct: 207 IKEGYVSIVFVANS-IVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIE 265

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKC--------------------------------LA 209
           +L LF +MQ   +A ++YTF   L+                                 +A
Sbjct: 266 ALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIA 325

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           +     ++ +A  +F  + D D +SWN M+SG++ NG+  + L+ + EM + G   DL  
Sbjct: 326 MYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVA 385

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           ++++++  A  G  + G  +HA+A+K     ++   N+L+DMY+K   +     +F+KM 
Sbjct: 386 VISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP 445

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ++ VVSWT++IAG+A+ G    A+ LFR +  EGI+ DV  I+SIL AC+   L+   K+
Sbjct: 446 DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKE 505

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H YI    + S L + N ++D+Y +CG++  A  +F  +  KD+VSW +MI        
Sbjct: 506 IHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGL 564

Query: 443 ---ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              AL+LF  M +   EPD +++  IL A ASL+AL++G+EIHG+++R G   + ++A+ 
Sbjct: 565 ANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAST 624

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +VDMY +CG L  +R++F+ I  KDL+ WT MI  YGMHG G  AI  F  M    I PD
Sbjct: 625 LVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPD 684

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            ++F++VLYACSHSGL++EG RF   M+YE  +EP  EHYAC+VDLL R  +L EAY+F+
Sbjct: 685 HIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFV 744

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           + M V P A +W +LL  C+IH   +L E  A+ + E++P+N G YVL++NVY+   +W+
Sbjct: 745 KGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWK 804

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE- 737
           +V+ +R ++   GLKKNPGCSWIE+  KV+ F+A   SHP + +I S L ++  ++ +E 
Sbjct: 805 DVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEG 864

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           GY  +T++ L NA E EK   L GHSE+LA+A+G+L  P G ++R+TKNLRVCGDCH   
Sbjct: 865 GYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFC 924

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K +SK   RE+V+RD+NRFHHFK G CSC   W
Sbjct: 925 KLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957



 Score =  302 bits (774), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 189/621 (30%), Positives = 324/621 (52%), Gaps = 62/621 (9%)

Query: 74  CEVGNLEKAMEVL------YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           C+ G++ +A + L       S  +  +D + Y S+L+LC   K+L +G++VH+ +  S  
Sbjct: 51  CKRGSVNEAFQSLTDLFANQSPSQFSLD-EAYSSVLELCGSKKALSEGQQVHAHMITSNA 109

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
           + +   L ++LVFM+  CG L +  ++F+ + +  +F WN ++  Y   G    SL L++
Sbjct: 110 LFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYR 169

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------------- 221
           +M+  GI  D+ TF C+LK   ++ + R   + H                          
Sbjct: 170 EMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCN 229

Query: 222 ------KLFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                 +LFD + ++ DVVSWN MIS Y +NG + + L +F EM       +  T V  L
Sbjct: 230 DLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAAL 289

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             C +   +  G  +HA  LK+ +   +   N L+ MY++ G +  A  +F  M +   +
Sbjct: 290 QACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTI 349

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW SM++G+ + G++  A++ +  M   G +PD+ A+ SI+ A A  G    G  +H Y 
Sbjct: 350 SWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYA 409

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
            +N + S L V N+L+DMYAK  SM   + +F++MP KD+VSW T+I           AL
Sbjct: 410 MKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRAL 469

Query: 445 DLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           +LF  + L+  + D + ++ IL AC+ L  +   +EIH YI+R G+S D  + N IVD+Y
Sbjct: 470 ELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVY 528

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            +CG +  A  +F++I  KD++SWT MI+ Y  +G   +A+  F+ M++ G+EPD +S +
Sbjct: 529 GECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLV 588

Query: 564 SVLYACSHSGLVDEGWRFFN-MMRYECNIEPKLEHYACMVDLLSRTGNLSEA---YRFIE 619
           S+L A +    + +G      ++R    +E  L   + +VD+ +R G L ++   + FI 
Sbjct: 589 SILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA--STLVDMYARCGTLEKSRNVFNFIR 646

Query: 620 MMPVAPDATIWGSLLCGCRIH 640
                 D  +W S++    +H
Sbjct: 647 ----NKDLVLWTSMINAYGMH 663



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 240/459 (52%), Gaps = 23/459 (5%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           DA KLFD +  + + +WN MI  Y+ NG     LE+++EM   G  +D  T   +L  C 
Sbjct: 132 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 191

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS-VVSWT 337
                 +G  VH  A+K  +   +   N+++ MY+KC DL+GA ++F++M E+  VVSW 
Sbjct: 192 LLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 251

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           SMI+ Y+  G    A+RLF  M +  + P+ Y   + L AC     ++ G  +H  + ++
Sbjct: 252 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 311

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNF 454
               +++V+NAL+ MYA+ G M +A ++F  M   D +SWN+M+       L+   LQ +
Sbjct: 312 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 371

Query: 455 --------EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
                   +PD V +  I+ A A       G +IH Y +++G+ +D  V N++VDMY K 
Sbjct: 372 HEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 431

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             +     +FD +P KD++SWT +IAG+  +G    A+  F +++  GI+ D +   S+L
Sbjct: 432 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 491

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            ACS   L+       + +  +   +  L++   +VD+    GN+  A R  E++    D
Sbjct: 492 LACSGLKLISSVKEIHSYIIRKGLSDLVLQN--GIVDVYGECGNVDYAARMFELIEFK-D 548

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAE--HVFE---LEPDN 660
              W S++  C +H+   LA +  E  H+ +   +EPD+
Sbjct: 549 VVSWTSMI-SCYVHN--GLANEALELFHLMKETGVEPDS 584



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 198/416 (47%), Gaps = 36/416 (8%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T ++N+ +  F + G   +A++  +    +  K D     SI+   A   +   G ++H+
Sbjct: 348 TISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHA 407

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              ++G+  D  V G+ LV M+     +K    +F+K+ +  V  W  ++  +++ G+  
Sbjct: 408 YAMKNGLDSDLQV-GNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHS 466

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVL---------------------KCLA---------- 209
            +L LF+++Q  GI  D    S +L                     K L+          
Sbjct: 467 RALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVD 526

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           V G    V  A ++F+ +  +DVVSW  MIS Y+ NG+A + LE+F  M   G   D  +
Sbjct: 527 VYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSIS 586

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V++LS  A+  AL  G+ +H F ++  F  E S  +TL+DMY++CG L+ +  VF  + 
Sbjct: 587 LVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR 646

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            + +V WTSMI  Y   G    AI LFR M  E I PD  A  ++L+AC+  GL+  G+ 
Sbjct: 647 NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRR 706

Query: 390 VHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
             + +K E  ++        L+D+  +   + +A      M V+     W  ++GA
Sbjct: 707 FLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGA 762


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 312/807 (38%), Positives = 481/807 (59%), Gaps = 49/807 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           N N+ I + C +GNL++AM  L S  + +I  +   Y ++++LC   ++ ++G +V+S +
Sbjct: 73  NPNSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYV 132

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             S   +    LG+ L+ MFV  G+L +   VF +++   +F WN+L+  Y+K G F E+
Sbjct: 133 SISMSHLSLQ-LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEA 191

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK-------------------- 222
           L L+ +M  +G+  D YTF CVL+    + N  R ++ H                     
Sbjct: 192 LDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITM 251

Query: 223 ------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                       +FD++ +RD +SWN MISGY  NGV  +GL +F  M+    + DL TM
Sbjct: 252 YVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTM 311

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +V++ C   G    GR +H + L+  F ++ S +N+L+ MYS  G ++ A  VF +   
Sbjct: 312 TSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTEC 371

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R +VSWT+MI+GY    +   A+  ++ M  EGI PD   I  +L AC+C   L++G ++
Sbjct: 372 RDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNL 431

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--------- 441
           H+  K+  + S   V+N+L+DMYAKC  +  A  +F+    K+IVSW ++I         
Sbjct: 432 HEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRC 491

Query: 442 -GALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             AL  F  M++  +P+ VT+ C+L ACA + AL  G+EIH + LR G+S D  + NAI+
Sbjct: 492 FEALFFFREMIRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAIL 551

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMYV+CG +  A   F  +   ++ SW I++ GY   G G  A   F  M ++ + P+EV
Sbjct: 552 DMYVRCGRMEYAWKQFFSVD-HEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEV 610

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +FIS+L ACS SG+V EG  +FN M+Y+ +I P L+HYAC+VDLL R+G L EAY FI+ 
Sbjct: 611 TFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQK 670

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ PD  +WG+LL  CRIHH V+L E  AE++F+ +  + GYY+LL+N+YA+  KW++V
Sbjct: 671 MPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKV 730

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY- 739
            ++R+ + + GL  +PGCSW+E+KG V+ F++  + HP  K+I +LL+R   +MK  G  
Sbjct: 731 AEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVE 790

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P++ +  ++  E  K    CGHSE+LA+ FG++N   G  I VTKNL +C  CH + KF
Sbjct: 791 GPESSH--MDIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKF 848

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSC 826
           +S+  RREI +RD+ +FHHFK G CSC
Sbjct: 849 ISREVRREISVRDAEQFHHFKGGICSC 875


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 318/813 (39%), Positives = 483/813 (59%), Gaps = 49/813 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            +NA IG +   G    ++E+      S I  D  T+  IL+ C  LK    G +VH + 
Sbjct: 183 TWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLA 242

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFIWNLLMHEYSKTGNFKE 181
            + G V    V  S +V M+  C DL   R++F+++ +   V  WN ++  YS  G   E
Sbjct: 243 IKEGYVSIVFVANS-IVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIE 301

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKC--------------------------------LA 209
           +L LF +MQ   +A ++YTF   L+                                 +A
Sbjct: 302 ALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIA 361

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           +     ++ +A  +F  + D D +SWN M+SG++ NG+  + L+ + EM + G   DL  
Sbjct: 362 MYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVA 421

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           ++++++  A  G  + G  +HA+A+K     ++   N+L+DMY+K   +     +F+KM 
Sbjct: 422 VISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP 481

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ++ VVSWT++IAG+A+ G    A+ LFR +  EGI+ DV  I+SIL AC+   L+   K+
Sbjct: 482 DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKE 541

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H YI    + S L + N ++D+Y +CG++  A  +F  +  KD+VSW +MI        
Sbjct: 542 IHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGL 600

Query: 443 ---ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              AL+LF  M +   EPD +++  IL A ASL+AL++G+EIHG+++R G   + ++A+ 
Sbjct: 601 ANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAST 660

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +VDMY +CG L  +R++F+ I  KDL+ WT MI  YGMHG G  AI  F  M    I PD
Sbjct: 661 LVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPD 720

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            ++F++VLYACSHSGL++EG RF   M+YE  +EP  EHY C+VDLL R  +L EAY+F+
Sbjct: 721 HIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFV 780

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           + M V P A +W +LL  C+IH   +L E  A+ + E++P+N G YVL++NVYA   +W+
Sbjct: 781 KGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWK 840

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE- 737
           +V+++R ++   GLKKNPGCSWIE+  KV+ F+A   SHP + +I S L ++  ++ +E 
Sbjct: 841 DVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEG 900

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           GY  +T++ L NA E EK   L GHSE+LA+A+G+L  P G ++R+TKNLRVCGDCH   
Sbjct: 901 GYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFC 960

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K +SK   RE+V+RD+NRFHHFK G CSC   W
Sbjct: 961 KLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 239/459 (52%), Gaps = 23/459 (5%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           DA KLFD +  + + +WN MI  Y+ NG     LE+++EM   G  +D  T   +L  C 
Sbjct: 168 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 227

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS-VVSWT 337
                  G  VH  A+K  +   +   N+++ MY+KC DL+GA ++F++M E+  VVSW 
Sbjct: 228 LLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 287

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           SMI+ Y+  G    A+RLF  M +  + P+ Y   + L AC     ++ G  +H  + ++
Sbjct: 288 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 347

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNF 454
               +++V+NAL+ MYA+ G M +A ++F  M   D +SWN+M+       L+   LQ +
Sbjct: 348 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 407

Query: 455 --------EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
                   +PD V +  I+ A A       G +IH Y +++G+ +D  V N++VDMY K 
Sbjct: 408 HEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 467

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             +     +FD +P KD++SWT +IAG+  +G    A+  F +++  GI+ D +   S+L
Sbjct: 468 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 527

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            ACS   L+       + +  +   +  L++   +VD+    GN+  A R  E++    D
Sbjct: 528 LACSGLKLISSVKEIHSYIIRKGLSDLVLQN--GIVDVYGECGNVDYAARMFELIEFK-D 584

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAE--HVFE---LEPDN 660
              W S++  C +H+   LA +  E  H+ +   +EPD+
Sbjct: 585 VVSWTSMI-SCYVHN--GLANEALELFHLMKETGVEPDS 620



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 194/387 (50%), Gaps = 16/387 (4%)

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGA 321
           F++D A   +VL  C +  AL  G+ VHA  + +      +  +  L+ MY KCG L  A
Sbjct: 111 FSLDEA-YSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDA 169

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            ++F+ M  +++ +W +MI  Y   G   G++ L+R M   GI  D      IL AC   
Sbjct: 170 EKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLL 229

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTM 440
                G +VH    +    S ++V+N+++ MY KC  +  A  +F++MP K D+VSWN+M
Sbjct: 230 KDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSM 289

Query: 441 IG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
           I           AL LF  M + +  P+  T    L AC   + +++G  IH  +L+   
Sbjct: 290 ISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSY 349

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             +  VANA++ MY + G +  A ++F  +   D ISW  M++G+  +G   +A+  +++
Sbjct: 350 YINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHE 409

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           MR AG +PD V+ IS++ A + SG    G +  +    +  ++  L+    +VD+ ++  
Sbjct: 410 MRDAGQKPDLVAVISIIAASARSGNTLNGMQ-IHAYAMKNGLDSDLQVGNSLVDMYAKFC 468

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCG 636
           ++       + MP   D   W +++ G
Sbjct: 469 SMKYMDCIFDKMP-DKDVVSWTTIIAG 494



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 199/416 (47%), Gaps = 36/416 (8%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T ++N+ +  F + G   +A++  +    +  K D     SI+   A   +  +G ++H+
Sbjct: 384 TISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHA 443

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              ++G+  D  V G+ LV M+     +K    +F+K+ +  V  W  ++  +++ G+  
Sbjct: 444 YAMKNGLDSDLQV-GNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHS 502

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVL---------------------KCLA---------- 209
            +L LF+++Q  GI  D    S +L                     K L+          
Sbjct: 503 RALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVD 562

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           V G    V  A ++F+ +  +DVVSW  MIS Y+ NG+A + LE+F  M   G   D  +
Sbjct: 563 VYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSIS 622

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V++LS  A+  AL  G+ +H F ++  F  E S  +TL+DMY++CG L+ +  VF  + 
Sbjct: 623 LVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR 682

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            + +V WTSMI  Y   G    AI LFR M  E I PD  A  ++L+AC+  GL+  G+ 
Sbjct: 683 NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRR 742

Query: 390 VHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
             + +K E  ++        L+D+  +   + +A      M V+     W  ++GA
Sbjct: 743 FLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGA 798


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 309/813 (38%), Positives = 446/813 (54%), Gaps = 52/813 (6%)

Query: 66   YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
            YNA I    + G+  +A E  Y   S+   ++  TY SIL  C+  K+LE GK +HS I 
Sbjct: 298  YNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357

Query: 124  ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            E G    D  +G+ L+ M+  CGDL + R +F  +    +  WN ++  Y++  +  E++
Sbjct: 358  EDGHS-SDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAM 416

Query: 184  YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD------------------------ 219
             L+K+MQS G+     TF   L  L+   NS    D                        
Sbjct: 417  RLYKQMQSEGVKPGRVTF---LHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473

Query: 220  -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                       A  +F+    RDV+SWN MI+G+  +G  E   ++F+EM N     D  
Sbjct: 474  NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNI 533

Query: 269  TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            T  +VLSGC N  AL  G+ +H    ++    +++  N L++MY +CG L  A  VF  +
Sbjct: 534  TFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593

Query: 329  GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
              R V+SWT+MI G A +G    AI LF  M  EG  P     +SIL  C     L+ GK
Sbjct: 594  QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGK 653

Query: 389  DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
             V  YI  +  +    V NAL+  Y+K GSM DA  VF++MP +DIVSWN +I       
Sbjct: 654  KVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNG 713

Query: 443  ----ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                A++    M  Q+  P+  +   +L AC+S +ALE G+ +H  I++  +  D  V  
Sbjct: 714  LGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGA 773

Query: 498  AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
            A++ MY KCG    A+ +FD I  K++++W  MI  Y  HG    A+  FN M + GI+P
Sbjct: 774  ALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKP 833

Query: 558  DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
            D  +F S+L AC+H+GLV EG++ F+ M  E  + P +EHY C+V LL R     EA   
Sbjct: 834  DGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETL 893

Query: 618  IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
            I  MP  PDA +W +LL  CRIH  + LAE  A +  +L   N   Y+LL+NVYA A +W
Sbjct: 894  INQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRW 953

Query: 678  EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
            ++V K+R  +  RG++K PG SWIE+   ++ F+A   SHP   +I + LKRL +EM+  
Sbjct: 954  DDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEA 1013

Query: 738  GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
            GYFP T++ L +  +  +E +LC HSE+LA+A+G++  P G  IR+ KNLR+CGDCH  +
Sbjct: 1014 GYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTAS 1073

Query: 798  KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KF+SK   REI+ RDSNRFH FK+G+CSC  +W
Sbjct: 1074 KFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106



 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 203/680 (29%), Positives = 341/680 (50%), Gaps = 59/680 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  + + G  +KA ++    + +    +  TY SIL  C     LE+GKK+HS I
Sbjct: 95  SWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQI 154

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G   D  V  S L+ M+  CGDL   R+VF  I    V  +N ++  Y++    KE 
Sbjct: 155 IKAGYQRDPRVQNS-LLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKEC 213

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL------------------- 223
           L LF +M S GI+ D  T+  +L            K  HKL                   
Sbjct: 214 LGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTM 273

Query: 224 -------------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                        F   +DRDVV +N +I+    +G   +  E +  M + G  ++  T 
Sbjct: 274 CVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTY 333

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           +++L+ C+   AL  G+ +H+   +   S ++   N L+ MY++CGDL  A  +F  M +
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPK 393

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R ++SW ++IAGYAR      A+RL++ M  EG++P       +L ACA       GK +
Sbjct: 394 RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMI 453

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H+ I  + ++S+ +++NALM+MY +CGS+ +A++VF     +D++SWN+MI         
Sbjct: 454 HEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY 513

Query: 443 --ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             A  LF  M  +  EPD +T A +L  C +  ALE G++IHG I   G+  D N+ NA+
Sbjct: 514 ETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNAL 573

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           ++MY++CG L  AR++F  +  +D++SWT MI G    G    AI  F  M+  G  P +
Sbjct: 574 INMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVK 633

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA--CMVDLLSRTGNLSEAYRF 617
            +F S+L  C+ S  +DEG +   ++ Y  N   +L+      ++   S++G++++A   
Sbjct: 634 STFSSILKVCTSSACLDEGKK---VIAYILNSGYELDTGVGNALISAYSKSGSMTDAREV 690

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD----NTGYYVLLANVYAE 673
            + MP + D   W  ++ G   + +  L +   E  ++++      N   +V L N  + 
Sbjct: 691 FDKMP-SRDIVSWNKIIAG---YAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSS 746

Query: 674 AEKWEEVKKLREKISRRGLK 693
               EE K++  +I +R L+
Sbjct: 747 FSALEEGKRVHAEIVKRKLQ 766



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 165/594 (27%), Positives = 295/594 (49%), Gaps = 46/594 (7%)

Query: 87  YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG 146
           +    ++ +  TY ++LQ C   + L + K++H+ + E+  V  D  L + L+ M+V C 
Sbjct: 18  HQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEA-WVGPDIFLSNLLINMYVKCR 76

Query: 147 DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
            + +  +VF ++    V  WN L+  Y++ G  K++  LF++MQ+ G   +  T+  +L 
Sbjct: 77  SVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILT 136

Query: 207 C--------------------------------LAVVGNSRRVKDAHKLFDELSDRDVVS 234
                                            L++ G    +  A ++F  +S RDVVS
Sbjct: 137 ACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVS 196

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           +N M+  Y      ++ L +F +M + G + D  T + +L        L  G+ +H   +
Sbjct: 197 YNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTV 256

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           +   + +I     L+ M  +CGD+D A + F+   +R VV + ++IA  A+ G    A  
Sbjct: 257 EEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFE 316

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
            +  M  +G+  +     SIL+AC+    LE GK +H +I E+   S + + NAL+ MYA
Sbjct: 317 QYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMAC 463
           +CG +  A  +F  MP +D++SWN +I           A+ L+  M  +  +P  VT   
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           +L ACA+ +A   G+ IH  ILR GI ++ ++ANA+++MY +CG L+ A+++F+   A+D
Sbjct: 437 LLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARD 496

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           +ISW  MIAG+  HG    A   F +M+   +EPD ++F SVL  C +   ++ G +   
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
            +  E  ++  +     ++++  R G+L +A      +    D   W +++ GC
Sbjct: 557 RIT-ESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGC 608



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 162/492 (32%), Positives = 256/492 (52%), Gaps = 16/492 (3%)

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           R V DAH++F E+  RDV+SWN +IS Y   G  +K  ++F+EM N GF  +  T +++L
Sbjct: 76  RSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISIL 135

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           + C +   L  G+ +H+  +KA + ++    N+LL MY KCGDL  A +VF  +  R VV
Sbjct: 136 TACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVV 195

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           S+ +M+  YA++      + LF  M  EGI PD     ++L A     +L+ GK +H   
Sbjct: 196 SYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLT 255

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNF 454
            E  + S + V  AL+ M  +CG +  A+  F     +D+V +N +I AL      ++ F
Sbjct: 256 VEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAF 315

Query: 455 E------PDGV-----TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           E       DGV     T   IL AC++  ALE G+ IH +I   G S+D  + NA++ MY
Sbjct: 316 EQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMY 375

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            +CG L  AR LF  +P +DLISW  +IAGY       +A+  +  M+  G++P  V+F+
Sbjct: 376 ARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFL 435

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L AC++S    +G +  +       I+        ++++  R G+L EA    E    
Sbjct: 436 HLLSACANSSAYADG-KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQ- 493

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVF--ELEPDNTGYYVLLANVYAEAEKWEEVK 681
           A D   W S++ G   H   + A K+ + +   ELEPDN  +  +L+      E  E  K
Sbjct: 494 ARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGC-KNPEALELGK 552

Query: 682 KLREKISRRGLK 693
           ++  +I+  GL+
Sbjct: 553 QIHGRITESGLQ 564



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/526 (29%), Positives = 246/526 (46%), Gaps = 58/526 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  +    +  +AM +     SE  K    T+  +L  CA+  +  DGK +H  I
Sbjct: 398 SWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI 457

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SGI   +G L + L+ M+  CG L E + VF       V  WN ++  +++ G+++ +
Sbjct: 458 LRSGIK-SNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETA 516

Query: 183 LYLFKKMQSLGIAADSYTFSCV------------------------LKCLAVVGNS---- 214
             LF++MQ+  +  D+ TF+ V                        L+    +GN+    
Sbjct: 517 YKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINM 576

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 ++DA  +F  L  RDV+SW  MI G    G   K +E+F +M N GF    +T 
Sbjct: 577 YIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTF 636

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++L  C +   L  G+ V A+ L + +  +    N L+  YSK G +  A  VF+KM  
Sbjct: 637 SSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPS 696

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R +VSW  +IAGYA+ G+   A+     M  + + P+ ++  S+L+AC+    LE GK V
Sbjct: 697 RDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRV 756

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I +  +Q  + V  AL+ MYAKCGS  +A+ VF+ +  K++V+WN MI         
Sbjct: 757 HAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLA 816

Query: 443 --ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL  F  M  +  +PDG T   IL AC        G  + GY +   + ++  V   I
Sbjct: 817 SKALGFFNCMEKEGIKPDGSTFTSILSACN-----HAGLVLEGYQIFSSMESEYGVLPTI 871

Query: 500 VDMYVKCGVLVLAR------SLFDMIP-AKDLISWTIMIAGYGMHG 538
                  G+L  AR      +L + +P   D   W  ++    +HG
Sbjct: 872 EHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHG 917



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 215/444 (48%), Gaps = 16/444 (3%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            + AT V +L  C     L   + +HA  ++A    +I  +N L++MY KC  +  A +V
Sbjct: 25  TERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQV 84

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F++M  R V+SW S+I+ YA++G    A +LF  M   G  P+     SIL AC     L
Sbjct: 85  FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
           E GK +H  I +   Q    V N+L+ MY KCG +  A  VF  +  +D+VS+NTM+G  
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204

Query: 443 --------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                    L LF  M  +   PD VT   +L A  + + L+ G+ IH   +  G+++D 
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI 264

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            V  A+V M V+CG +  A+  F     +D++ +  +IA    HG   +A   +  MR  
Sbjct: 265 RVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSD 324

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G+  +  +++S+L ACS S  ++ G +  +    E      ++    ++ + +R G+L +
Sbjct: 325 GVALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLANVY 671
           A      MP   D   W +++ G     +   A ++ + +    ++P    +  LL+   
Sbjct: 384 ARELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC- 441

Query: 672 AEAEKWEEVKKLREKISRRGLKKN 695
           A +  + + K + E I R G+K N
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSN 465


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 314/826 (38%), Positives = 459/826 (55%), Gaps = 62/826 (7%)

Query: 50  PISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADL 109
           P+ ++  ++   +    N  + R  E GN               ID++TY  + Q C +L
Sbjct: 25  PVPSARFRSTFTRRVGANDVLQRLGEGGN--------------HIDSRTYVKLFQRCTEL 70

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLL 169
           +    GK+V   I + G  ++   L + L+ ++  CG++ E R++F+ ++N  V  WN L
Sbjct: 71  RDAALGKQVRDHIIQGGRQLNIYELNT-LIKLYSICGNVTEARQIFDSVENKTVVTWNAL 129

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---------------------- 207
           +  Y++ G+ KE+  LF++M   G+     TF  VL                        
Sbjct: 130 IAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGF 189

Query: 208 ------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                       + V G S  + DA ++FD L  RDV ++N M+ GY  +G  EK  E+F
Sbjct: 190 VSDFRIGTALVSMYVKGGS--MDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELF 247

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
             M  +G   +  + +++L GC    AL +G+AVHA  + A    +I    +L+ MY+ C
Sbjct: 248 YRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTC 307

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G ++GA RVF+ M  R VVSWT MI GYA  G  + A  LF  M  EGI+PD      I+
Sbjct: 308 GSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIM 367

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
           +ACA    L   +++H  +      + L VS AL+ MYAKCG++ DA  VF+ MP +D+V
Sbjct: 368 NACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVV 427

Query: 436 SWNTMIGA----------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYI 484
           SW+ MIGA           + F  M + N EPDGVT   +L AC  L AL+ G EI+   
Sbjct: 428 SWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQA 487

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
           ++  + +   + NA++ M  K G +  AR +FD +  +D+I+W  MI GY +HG   +A+
Sbjct: 488 IKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREAL 547

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
             F+ M +    P+ V+F+ VL ACS +G VDEG RFF  +     I P ++ Y CMVDL
Sbjct: 548 YLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDL 607

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
           L R G L EA   I+ MPV P ++IW SLL  CRIH  + +AE+ AE    ++P +   Y
Sbjct: 608 LGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVY 667

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
           V L+++YA A  WE V K+R+ +  RG++K  GC+WIE+ GKV+ FV    SHP   +I 
Sbjct: 668 VQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIY 727

Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVT 784
           + L RL   +KREGY P T+  L +  E +KE A+  HSEKLA+A+G+L+LP+G  IR+ 
Sbjct: 728 AELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIY 787

Query: 785 KNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KNLRVC DCH  +KF+SK   REI+ RD++RFHHFKDG CSC  +W
Sbjct: 788 KNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 295/772 (38%), Positives = 461/772 (59%), Gaps = 48/772 (6%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L+LC  +K L    +   +I ++G+   + +  +KLV +F   G L E  RVF  I++ 
Sbjct: 83  LLELCTSMKELH---QFIPLIIKNGLY-SEHLFQTKLVSLFCKFGSLHEAARVFQPIEDK 138

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK--------------- 206
              +++ ++  Y++  +  +++  F +M+  G+    Y F+ +LK               
Sbjct: 139 IDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIH 198

Query: 207 CLAVV-----------------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
           C  +V                    R V++A+K+FD + +RD+V WN +ISGY  NG  +
Sbjct: 199 CQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGK 258

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
             LE+   M   G   D  T+V++L   A+ G+L  GR++H ++++A F   ++ +  L+
Sbjct: 259 TALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALV 318

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           DMYSKCG +  A  +F++M  ++VVSW SMI GY + G    A+ +F+ M+ E +E    
Sbjct: 319 DMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNV 378

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            +   LHACA  G +E G+ VH  + + ++ S + V N+L+ MY+KC  +  A  +F  +
Sbjct: 379 TVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENL 438

Query: 430 PVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGR 478
             K +VSWN MI           A+D F  M LQN +PD  TM  ++PA A L+ L + +
Sbjct: 439 QHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAK 498

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
            IHG ++R  +  +  VA A+VDMY KCG +  AR LFDM+  + + +W  MI GYG HG
Sbjct: 499 WIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHG 558

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
            G  A+  F  M++  I+P+EV+F+ VL ACSHSGLV+EG+++F  M+ +  +EP ++HY
Sbjct: 559 LGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHY 618

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
             MVDLL R   L+EA+ FI+ MP+ P  +++G++L  CRIH  V+L EK A  +F+L+P
Sbjct: 619 GAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDP 678

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
           D+ GY+VLLAN+YA A  W++V ++R  + ++G++K PG S +E++ +V+ F +G +SHP
Sbjct: 679 DDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHP 738

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
            AKKI + L+ L   +K  GY P T  ++ + +++ KE  L  HSEKLA+AF +LN   G
Sbjct: 739 QAKKIYAFLETLGNRIKAAGYMPDTN-SVHDVEDVVKEQLLNSHSEKLAIAFSLLNTSPG 797

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            TI + KNLRVCGDCH   K++S   +REI++RD  RFHHFKDG CSC  +W
Sbjct: 798 TTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 295/781 (37%), Positives = 448/781 (57%), Gaps = 44/781 (5%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           ++D+  Y  +LQ C   K L  GK+VH  I   G V  +  + + L+ ++  CG + E R
Sbjct: 25  QVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCG-VKPNVYITNTLLKLYAHCGSVNEAR 83

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--- 209
           ++F+K  N  V  WN+++  Y+  G  +E+  LF  MQ   +  D +TF  +L   +   
Sbjct: 84  QLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPA 143

Query: 210 ---------------------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMIS 240
                                 VGN+          V+DA ++FD ++ RD VSW  +  
Sbjct: 144 VLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTG 203

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
            Y  +G  E+ L+ +  ML         T + VLS C +  AL  G+ +HA  +++ +  
Sbjct: 204 AYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHS 263

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++  +  L  MY KCG    A  VFE +  R V++W +MI G+   G  + A   F  M+
Sbjct: 264 DVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRML 323

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
            EG+ PD    T++L ACA  G L  GK++H    ++ + S +   NAL++MY+K GSM 
Sbjct: 324 EEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMK 383

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACA 469
           DA  VF++MP +D+VSW T++G          +   F  MLQ   + + +T  C+L AC+
Sbjct: 384 DARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACS 443

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           +  AL+ G+EIH  +++ G+ AD  V NA++ MY KCG +  A  +F+ +  +D+++W  
Sbjct: 444 NPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNT 503

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           +I G G +G G +A+  +  M+  G+ P+  +F++VL AC    LV+EG R F  M  + 
Sbjct: 504 LIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDY 563

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            I P  +HYACMVD+L+R G+L EA   I  +P+ P A +WG+LL  CRIH  V++ E+ 
Sbjct: 564 GIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERA 623

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           AEH  +LEP N G YV L+ +YA A  W +V KLR+ +  RG+KK PG SWIEI G+V+ 
Sbjct: 624 AEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHS 683

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           FVA   SHP  ++I + L+ L+ +MK  GY P TR+ + + D+  KE A+C HSEKLA+A
Sbjct: 684 FVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIA 743

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           +G+++ P G  IR++KNLRVC DCH   KF+SK  +REI+ RD++RFHHFK+G CSC  +
Sbjct: 744 YGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDY 803

Query: 830 W 830
           W
Sbjct: 804 W 804



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/393 (33%), Positives = 210/393 (53%), Gaps = 13/393 (3%)

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           +V + +   G  VD    V +L  C     L  G+ VH   L+      +   NTLL +Y
Sbjct: 14  DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           + CG ++ A ++F+K   +SVVSW  MI+GYA  G+   A  LF  M +E +EPD +   
Sbjct: 74  AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           SIL AC+   +L  G+++H  + E  + +   V NAL+ MYAKCGS+ DA  VF+ M  +
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193

Query: 433 DIVSWNTMIGA----------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIH 481
           D VSW T+ GA          L  + AMLQ    P  +T   +L AC SLAALE+G++IH
Sbjct: 194 DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
            +I+     +D  V+ A+  MY+KCG    AR +F+ +  +D+I+W  MI G+   G   
Sbjct: 254 AHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLE 313

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
           +A  TF+ M + G+ PD  ++ +VL AC+  G +  G +  +    +  +   +     +
Sbjct: 314 EAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARG-KEIHARAAKDGLVSDVRFGNAL 372

Query: 602 VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           +++ S+ G++ +A +  + MP   D   W +LL
Sbjct: 373 INMYSKAGSMKDARQVFDRMP-KRDVVSWTTLL 404



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 257/520 (49%), Gaps = 48/520 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  +   G  ++A  +  L   E+ + D  T+ SIL  C+    L  G+++H  +
Sbjct: 96  SWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRV 155

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            E+G+  +D  +G+ L+ M+  CG +++ RRVF+ + +     W  L   Y+++G  +ES
Sbjct: 156 MEAGLA-NDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEES 214

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRRV---------------------- 217
           L  +  M    +     T+  VL     LA +   +++                      
Sbjct: 215 LKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKM 274

Query: 218 -------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                  KDA ++F+ LS RDV++WN MI G++ +G  E+    F  ML  G   D AT 
Sbjct: 275 YMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATY 334

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            TVLS CA  G L  G+ +HA A K     ++ F N L++MYSK G +  A +VF++M +
Sbjct: 335 TTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPK 394

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R VVSWT+++  YA       +   F+ M+++G++ +      +L AC+    L+ GK++
Sbjct: 395 RDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEI 454

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLF--- 447
           H  + +  + + L V+NALM MY KCGS+ DA  VF  M ++D+V+WNT+IG L      
Sbjct: 455 HAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRG 514

Query: 448 VAMLQNFE--------PDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANA 498
           +  LQ +E        P+  T   +L AC     +E GR    ++ + +GI         
Sbjct: 515 LEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYAC 574

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
           +VD+  + G L  A  +   IP K   + W  ++A   +H
Sbjct: 575 MVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIH 614


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  580 bits (1495), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 302/811 (37%), Positives = 469/811 (57%), Gaps = 46/811 (5%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            ++NA +  + + G +E+A+++L   ++    +   T   +L  C    +LE G+++H   
Sbjct: 211  SWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEA 270

Query: 123  CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             ++ ++ D  V  + ++ M+  CG + E R VF+K++   V  W +++  Y+  G+ + +
Sbjct: 271  MKARLLFDVNV-ANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIA 329

Query: 183  LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR--- 215
              +F+KMQ  G+  +  T+  VL   +                         VG +    
Sbjct: 330  FEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKM 389

Query: 216  -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                   KD  ++F++L +RD+++WN MI G    G  E+  E++ +M   G   +  T 
Sbjct: 390  YAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITY 449

Query: 271  VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            V +L+ C N  AL +GR +H+  +K  F  +IS  N L+ MY++CG +  A  +F KM  
Sbjct: 450  VILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVR 509

Query: 331  RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
            + ++SWT+MI G A+ G+   A+ +F+ M + G++P+    TSIL+AC+    L+ G+ +
Sbjct: 510  KDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRI 569

Query: 391  HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
            H  + E  + +  +V+N L++MY+ CGS+ DA  VF++M  +DIV++N MIG        
Sbjct: 570  HQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLG 629

Query: 443  --ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
              AL LF  + +   +PD VT   +L ACA+  +LE  +EIH  +L+ G  +D ++ NA+
Sbjct: 630  KEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNAL 689

Query: 500  VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
            V  Y KCG    A  +FD +  +++ISW  +I G   HG G D +  F  M+  GI+PD 
Sbjct: 690  VSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDI 749

Query: 560  VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            V+F+S+L ACSH+GL++EG R+F  M  +  I P +EHY CMVDLL R G L E    I+
Sbjct: 750  VTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIK 809

Query: 620  MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
             MP   +  IWG+LL  CRIH  V +AE+ AE   +L+PDN   YV L+++YA A  W+ 
Sbjct: 810  TMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDS 869

Query: 680  VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
              KLR+ + +RG+ K PG SWIE+  K++ FVA   SHP ++KI + L +L   MK EGY
Sbjct: 870  AAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGY 929

Query: 740  FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
             P TR  + + DE EKE A+C HSE+LA+A+G+++   G  IR+ KNLRVC DCH   KF
Sbjct: 930  VPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKF 989

Query: 800  MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            ++K   REIV RD NRFHHFKDG CSC  +W
Sbjct: 990  ITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020



 Score =  312 bits (800), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 181/611 (29%), Positives = 327/611 (53%), Gaps = 56/611 (9%)

Query: 80  EKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
           ++AM+V+     + +++++  Y  +L+ C ++K L  G++VH  I +   V+D   + + 
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNA- 181

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGK--VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           L+ M++ CG ++E R+V+NK+++ +  V  WN ++  Y + G  +E+L L ++MQ  G+A
Sbjct: 182 LINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLA 241

Query: 196 A-----------------------------------DSYTFSCVLKCLAVVGNSRRVKDA 220
                                               D    +C+L   A  G+   + +A
Sbjct: 242 LGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGS---IHEA 298

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
            ++FD++  + VVSW  +I GY   G +E   E+F++M   G   +  T + VL+  +  
Sbjct: 299 REVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGP 358

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
            AL +G+ VH+  L A    +++    L+ MY+KCG      +VFEK+  R +++W +MI
Sbjct: 359 AALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMI 418

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
            G A  G ++ A  ++  M REG+ P+      +L+AC     L  G+++H  + ++   
Sbjct: 419 GGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFM 478

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM 450
             + V NAL+ MYA+CGS+ DA  +FN+M  KDI+SW  MIG          AL +F  M
Sbjct: 479 FDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDM 538

Query: 451 LQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
            Q   +P+ VT   IL AC+S AAL+ GR IH  ++  G++ D +VAN +V+MY  CG +
Sbjct: 539 QQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSV 598

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             AR +FD +  +D++++  MI GY  H  G +A+  F+ +++ G++PD+V++I++L AC
Sbjct: 599 KDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNAC 658

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           ++SG ++      +++  +  +       A +V   ++ G+ S+A    + M +  +   
Sbjct: 659 ANSGSLEWAKEIHSLVLKDGYLSDTSLGNA-LVSTYAKCGSFSDALLVFDKM-MKRNVIS 716

Query: 630 WGSLLCGCRIH 640
           W +++ GC  H
Sbjct: 717 WNAIIGGCAQH 727



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 171/510 (33%), Positives = 281/510 (55%), Gaps = 21/510 (4%)

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL--SDRDVVSWNCMISGYIANGVAEKGLEV 254
           D YT + ++      G+   +++A +++++L  ++R V SWN M+ GY+  G  E+ L++
Sbjct: 175 DQYTVNALINMYIQCGS---IEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKL 231

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
            +EM   G  +  AT + +LS C +  AL  GR +H  A+KA    +++  N +L+MY+K
Sbjct: 232 LREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAK 291

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
           CG +  A  VF+KM  +SVVSWT +I GYA  G  + A  +F+ M +EG+ P+     ++
Sbjct: 292 CGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINV 351

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L+A +    L+ GK VH +I     +S L V  AL+ MYAKCGS  D   VF ++  +D+
Sbjct: 352 LNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDL 411

Query: 435 VSWNTMIGAL----------DLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGY 483
           ++WNTMIG L          +++  M  +   P+ +T   +L AC +  AL  GREIH  
Sbjct: 412 IAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSR 471

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
           +++ G   D +V NA++ MY +CG +  AR LF+ +  KD+ISWT MI G    G G +A
Sbjct: 472 VVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEA 531

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           +A F DM+QAG++P+ V++ S+L ACS    +D G R    +  E  +         +V+
Sbjct: 532 LAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQV-IEAGLATDAHVANTLVN 590

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNT 661
           + S  G++ +A +  + M    D   + +++ G   H+  K A K+ + + E  L+PD  
Sbjct: 591 MYSMCGSVKDARQVFDRM-TQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKV 649

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRG 691
            Y  +L N  A +   E  K++   + + G
Sbjct: 650 TYINML-NACANSGSLEWAKEIHSLVLKDG 678



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 250/537 (46%), Gaps = 69/537 (12%)

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           ++ ++V + +   G  V+    + +L  C     L+ GR VH   ++ C   +    N L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182

Query: 309 LDMYSKCGDLDGAIRVFEKMG--ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           ++MY +CG ++ A +V+ K+   ER+V SW +M+ GY + G  + A++L R M + G+  
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
                  +L +C     LE G+++H    +  +   + V+N +++MYAKCGS+ +A  VF
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALE 475
           ++M  K +VSW  +IG          A ++F  M Q    P+ +T   +L A +  AAL+
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALK 362

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
            G+ +H +IL  G  +D  V  A+V MY KCG     R +F+ +  +DLI+W  MI G  
Sbjct: 363 WGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS-----------HSGLVDEGWRF--- 581
             G   +A   ++ M++ G+ P++++++ +L AC            HS +V +G+ F   
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482

Query: 582 ---------------------FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
                                FN M     +   +  +  M+  L+++G  +EA    + 
Sbjct: 483 VQNALISMYARCGSIKDARLLFNKM-----VRKDIISWTAMIGGLAKSGLGAEALAVFQD 537

Query: 621 MPVA---PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV-LLANVYAEAEK 676
           M  A   P+   + S+L  C     +    ++ + V E       +    L N+Y+    
Sbjct: 538 MQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGS 597

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
            ++ +++ +++++R +               N  + G ++H   K+   L  RL+ E
Sbjct: 598 VKDARQVFDRMTQRDIV------------AYNAMIGGYAAHNLGKEALKLFDRLQEE 642


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 302/846 (35%), Positives = 487/846 (57%), Gaps = 82/846 (9%)

Query: 66   YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
            +NA I  + ++ + E+A  +     K  +  D  T+ S L++C  L+S + GK+VHS + 
Sbjct: 244  WNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLI 303

Query: 124  ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
              G    D  +G+ L+ M+  C D +   +VF+++       WN ++   ++ G+F ++L
Sbjct: 304  ACGFK-GDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDAL 362

Query: 184  YLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRR------------------------ 216
             LF +MQ  G  ++ +    +L     LA +G  R                         
Sbjct: 363  VLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMY 422

Query: 217  -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL-GFNVDLATM 270
                 V++AH++F  L +R+ VS+N +++GY+  G AE+ LE++ +M +  G   D  T 
Sbjct: 423  SKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTF 482

Query: 271  VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             T+L+ CAN      GR +HA  ++A  +K I     L+ MYS+CG L+ A  +F +M E
Sbjct: 483  TTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAE 542

Query: 331  RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
            R+  SW SMI GY + G    A+RLF+ M   GI+PD ++++S+L +C      + G+++
Sbjct: 543  RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGREL 602

Query: 391  HDYIKENDMQSSLYVSNALMDMYAKCGSM------------------------------- 419
            H++I  N M+    +   L+DMYAKCGSM                               
Sbjct: 603  HNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRA 662

Query: 420  ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPAC 468
             DA+++F+QM  ++   WN+++           + + F+ ML+ + E D +TM  I+  C
Sbjct: 663  NDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLC 722

Query: 469  ASLAALERGREIHGYILRHG-ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
            +SL ALE G ++H  I++ G ++    +  A+VDMY KCG +  AR++FD +  K+++SW
Sbjct: 723  SSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSW 782

Query: 528  TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
              MI+GY  HG   +A+  + +M + G+ P+EV+F+++L ACSH+GLV+EG R F  M+ 
Sbjct: 783  NAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQE 842

Query: 588  ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
            + NIE K EHY CMVDLL R G L +A  F+E MP+ P+ + WG+LL  CR+H ++ +  
Sbjct: 843  DYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGR 902

Query: 648  KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
              A+ +FEL+P N G YV+++N+YA A +W+EV+ +R+ +  +G+KK+PG SWIEI  ++
Sbjct: 903  LAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEI 962

Query: 708  NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA---LCGHSE 764
             IF AG  +HP  ++I + L+ L L+ K  GY P T + L N  ++++E     L  HSE
Sbjct: 963  QIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSE 1022

Query: 765  KLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRC 824
            +LA++ G+++LP   TIRV KNLR+CGDCH   KF+SK   R I+ RD+NRFHHF++G+C
Sbjct: 1023 RLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKC 1082

Query: 825  SCRGFW 830
            SC  +W
Sbjct: 1083 SCGDYW 1088



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 165/581 (28%), Positives = 295/581 (50%), Gaps = 55/581 (9%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           +++   S ++   Y S++Q C D  S + GK +H+ +  +G    D  L +K++ ++   
Sbjct: 61  IHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYN-PDAYLMTKILMLYARS 119

Query: 146 G---DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
           G   DL   R++F ++    +  WN ++  Y++  ++ E L L+ +M+  G  +D +TF 
Sbjct: 120 GCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFP 179

Query: 203 CVLK-CLAV--VGNSRRVK-----------------------------DAHKLFDELSDR 230
            V+K C+A+  +G  R+++                             DA    DE+   
Sbjct: 180 SVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGT 239

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
            VV+WN +I+GY+     E+   +F  ML +G   D  T  + L  C    +   G+ VH
Sbjct: 240 SVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVH 299

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
           +  +   F  +    N L+DMY+KC D +  ++VF++MGER+ V+W S+I+  A+ G F+
Sbjct: 300 SKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFN 359

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK--DVHDYIKENDMQSSLYVSNA 408
            A+ LF  M   G + + + + SIL A A  GL +IGK  ++H ++  N + S + + +A
Sbjct: 360 DALVLFLRMQESGYKSNRFNLGSILMASA--GLADIGKGRELHGHLVRNLLNSDIILGSA 417

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN--FEP 456
           L+DMY+KCG + +A  VF  +  ++ VS+N ++           AL+L+  M      +P
Sbjct: 418 LVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQP 477

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           D  T   +L  CA+     +GR+IH +++R  I+ +  V   +V MY +CG L  A+ +F
Sbjct: 478 DQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIF 537

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           + +  ++  SW  MI GY  +G   +A+  F  M+  GI+PD  S  S+L +C       
Sbjct: 538 NRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQ 597

Query: 577 EGWRFFN-MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           +G    N ++R     E  L+    +VD+ ++ G++  A++
Sbjct: 598 KGRELHNFIVRNTMEEEGILQ--VVLVDMYAKCGSMDYAWK 636



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 233/471 (49%), Gaps = 71/471 (15%)

Query: 43  HSSCTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLY---SSEKSKIDTKT 98
           +S C +   +  + ++L+ + + +YNA +  + + G  E+A+E+ +   S +  + D  T
Sbjct: 422 YSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFT 481

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           + ++L LCA+ ++   G+++H+ +  + I   + ++ ++LV M+  CG L   + +FN++
Sbjct: 482 FTTLLTLCANQRNDNQGRQIHAHLIRANIT-KNIIVETELVHMYSECGRLNYAKEIFNRM 540

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
                + WN ++  Y + G  +E+L LFK+MQ  GI  D ++ S +L     + +S++ +
Sbjct: 541 AERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGR 600

Query: 219 DAH--------------------------------KLFDELSDRDVV------------- 233
           + H                                K++D+   +DV+             
Sbjct: 601 ELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSG 660

Query: 234 ------------------SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
                              WN +++GY   G+ ++    F EML      D+ TMVT+++
Sbjct: 661 RANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVN 720

Query: 276 GCANCGALMFGRAVHAFALKACFSK-EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            C++  AL  G  +H+  +K  F    +     L+DMYSKCG +  A  VF+ M  +++V
Sbjct: 721 LCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIV 780

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW +MI+GY++ G    A+ L+  M ++G+ P+     +IL AC+  GL+E G  +   +
Sbjct: 781 SWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSM 840

Query: 395 KEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           +E+ ++++       ++D+  + G + DA+    +MP++ ++ +W  ++GA
Sbjct: 841 QEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGA 891


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 305/868 (35%), Positives = 472/868 (54%), Gaps = 82/868 (9%)

Query: 44  SSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSK--IDTKTYCS 101
           +S   N   AS  + L         E+ R C+ G L++A+++L   ++    +++ TY  
Sbjct: 24  TSIVYNNGFASTGEELAGPRSVSGGEVWRLCKAGRLKEAIQLLGIIKQRGLLVNSNTYGC 83

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           I++ CA L+  EDGK VH  + E G+ ID   LG+ L+  +   GD+    +VF ++   
Sbjct: 84  IIEHCAKLRRFEDGKMVHKQLDELGLAIDI-YLGNSLINFYSKFGDVASVEQVFRRMTLR 142

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
            V  W+ ++  Y+   +  ++   F++M+   I  +  TF  +LK         + ++ H
Sbjct: 143 DVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIH 202

Query: 222 --------------------------------KLFDELSDRDVVSWNCMISGYIANGVAE 249
                                           ++F ++ +R+VVSW  +I     +    
Sbjct: 203 TVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLN 262

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           +  E++++ML  G + +  T V++L+ C    AL  GR +H+   +     ++   N L+
Sbjct: 263 EAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALI 322

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV-----FDGAIRLFRGMVREGI 364
            MY KC  +  A   F++M +R V+SW++MIAGYA+ G       D   +L   M REG+
Sbjct: 323 TMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGV 382

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS------ 418
            P+     SIL AC+  G LE G+ +H  I +   +S   +  A+ +MYAKCGS      
Sbjct: 383 FPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQ 442

Query: 419 -------------------------MADAESVFNQMPVKDIVSWNTMIGA---------- 443
                                    +  AE VF++M  +++VSWN MI            
Sbjct: 443 VFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKV 502

Query: 444 LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
            +L  +M ++ F+PD VT+  IL AC +L+ALERG+ +H   ++ G+ +D  VA +++ M
Sbjct: 503 FELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGM 562

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG +  AR++FD I  +D ++W  M+AGYG HG G +A+  F  M +  + P+E++F
Sbjct: 563 YSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITF 622

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
            +V+ AC  +GLV EG   F +M+ +  ++P  +HY CMVDLL R G L EA  FI+ MP
Sbjct: 623 TAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMP 682

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
             PD ++W +LL  C+ H  V+LAE  A H+  LEP N   YV L+N+YA+A +W++  K
Sbjct: 683 CEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTK 742

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R+ +  +GLKK+ G S IEI G+++ FVA   +HP    I + L+ L  EMK  GY P 
Sbjct: 743 VRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPD 802

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
            R+ L + DE++KE ALC HSEKLA+A+G+L  P G  IR+ KNLRVCGDCH   KF+SK
Sbjct: 803 MRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISK 862

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
             +REIV RD+NRFH+FK+G CSC  FW
Sbjct: 863 IRKREIVARDANRFHYFKNGTCSCGDFW 890


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 298/782 (38%), Positives = 446/782 (57%), Gaps = 44/782 (5%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S++D+  Y  +LQ C   K L  GK+VH  I   G+  +  ++ + L+ ++V CG + E 
Sbjct: 40  SQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINT-LLKLYVHCGSVNEA 98

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL--- 208
           RR+F+K  N  V  WN+++  Y+  G  +E+  LF  MQ  G+  D +TF  +L      
Sbjct: 99  RRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSP 158

Query: 209 ---------------------AVVGNS--------RRVKDAHKLFDELSDRDVVSWNCMI 239
                                A VGN+          V+DA ++FD ++ RD VSW  + 
Sbjct: 159 AALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 218

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
             Y  +G A++ L+ +  ML  G      T + VLS C +  AL  G+ +HA  +++   
Sbjct: 219 GAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHH 278

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            ++  +  L  MY KCG +  A  VFE +  R V++W +MI G    G  + A  +F  M
Sbjct: 279 SDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRM 338

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           ++E + PD     +IL ACA  G L  GK++H    ++ + S +   NAL++MY+K GSM
Sbjct: 339 LKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSM 398

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPAC 468
            DA  VF++MP +D+VSW  ++G          +   F  MLQ   E + +T  C+L AC
Sbjct: 399 KDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKAC 458

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           ++  AL+ G+EIH  +++ GI AD  VANA++ MY KCG +  A  + + +  +D+++W 
Sbjct: 459 SNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWN 518

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            +I G   +G G +A+  F  M+   + P+  +F++V+ AC    LV+EG R F  MR +
Sbjct: 519 TLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKD 578

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             I P  +HYACMVD+L+R G+L EA   I  MP  P A +WG+LL  CR H  V++ E+
Sbjct: 579 YGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQ 638

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            AE   +LEP N G YV L+ +YA A  W +V KLR+ +  RG+KK PG SWIE+ G+V+
Sbjct: 639 AAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVH 698

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            FVAG  SHP  ++I S L+ L  ++K  GY P TR+ + + D+  KE A+C HSEKLA+
Sbjct: 699 SFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAI 758

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           A+G+++ P    IRV+KNLRVC DCH   KF+SK   REI+ RD++RFHHFK+G CSC  
Sbjct: 759 AYGLISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGD 818

Query: 829 FW 830
           +W
Sbjct: 819 YW 820



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/395 (34%), Positives = 211/395 (53%), Gaps = 13/395 (3%)

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           +V + +   G  VD    V +L  C     L  G+ VH   L+      +   NTLL +Y
Sbjct: 30  DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
             CG ++ A R+F+K   +SVVSW  MI+GYA  G+   A  LF  M +EG+EPD +   
Sbjct: 90  VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           SIL AC+    L  G++VH  + E  + ++  V NAL+ MYAKCGS+ DA  VF+ M  +
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR 209

Query: 433 DIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIH 481
           D VSW T+ GA          L  + AMLQ    P  +T   +L AC SLAALE+G++IH
Sbjct: 210 DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
             I+     +D  V+ A+  MY+KCG +  AR +F+ +P +D+I+W  MI G    G   
Sbjct: 270 AQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLE 329

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
           +A   F+ M +  + PD V+++++L AC+  G +  G +  +    +  +   +     +
Sbjct: 330 EAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACG-KEIHARAVKDGLVSDVRFGNAL 388

Query: 602 VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           +++ S+ G++ +A +  + MP   D   W +L+ G
Sbjct: 389 INMYSKAGSMKDARQVFDRMP-KRDVVSWTALVGG 422



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 256/521 (49%), Gaps = 48/521 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  +   G  ++A  +  L   E  + D  T+ SIL  C+   +L  G++VH  +
Sbjct: 112 SWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRV 171

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            E+G+  ++  +G+ L+ M+  CG +++ RRVF+ + +     W  L   Y+++G  +ES
Sbjct: 172 MEAGLA-NNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQES 230

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRR----------------------- 216
           L  +  M   G+     T+  VL     LA +   ++                       
Sbjct: 231 LKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKM 290

Query: 217 ------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 VKDA ++F+ L +RDV++WN MI G + +G  E+   +F  ML      D  T 
Sbjct: 291 YIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTY 350

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           + +LS CA  G L  G+ +HA A+K     ++ F N L++MYSK G +  A +VF++M +
Sbjct: 351 LAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPK 410

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R VVSWT+++ GYA  G    +   F+ M+++G+E +      +L AC+    L+ GK++
Sbjct: 411 RDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEI 470

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLF 447
           H  + +  + + L V+NALM MY KCGS+ DA  V   M  +D+V+WNT+IG L      
Sbjct: 471 HAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRG 530

Query: 448 VAMLQNFE--------PDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANA 498
           +  LQ FE        P+  T   ++ AC     +E GR     + + +GI         
Sbjct: 531 LEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYAC 590

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
           +VD+  + G L  A  +   +P K   + W  ++A    HG
Sbjct: 591 MVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHG 631


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  573 bits (1476), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 302/868 (34%), Positives = 473/868 (54%), Gaps = 82/868 (9%)

Query: 44  SSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSK--IDTKTYCS 101
           +S   N   AS  K L   T     E+ R C+ G L +A+++L   ++    +++ TY  
Sbjct: 2   TSIVYNDGFASTGKELDGPTSVSGGEVWRLCKAGRLREAIQLLGIIKQRGLLVNSNTYGC 61

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +++ CA  +  EDGK VH  + E G+ ID   LG+ L+  +    D+    +VF ++   
Sbjct: 62  VIEHCAKARRFEDGKMVHKQLDELGVEIDI-YLGNSLINFYSKFEDVASAEQVFRRMTLR 120

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRRVK 218
            V  W+ ++  Y+   +  ++   F++M    I  +  TF  +LK     +++   R++ 
Sbjct: 121 DVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIH 180

Query: 219 D-----------------------------AHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                         A ++F ++++R+VVSW  +I     +    
Sbjct: 181 TIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLN 240

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           +  E++++ML  G + +  T V++L+ C    AL  GR +H+   +     ++   N L+
Sbjct: 241 EAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALI 300

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV-----FDGAIRLFRGMVREGI 364
            MY KC  +  A  +F++M +R V+SW++MIAGYA+ G       D   +L   M REG+
Sbjct: 301 TMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGV 360

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS------ 418
            P+     SIL AC   G LE G+ +H  + +   +    +  A+ +MYAKCGS      
Sbjct: 361 FPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQ 420

Query: 419 -------------------------MADAESVFNQMPVKDIVSWNTMIGA---------- 443
                                    ++ AE VF++MP +++VSWN MI            
Sbjct: 421 VFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKV 480

Query: 444 LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
            +L  +M  + F+PD VT+  IL AC +LA LERG+ +H   ++ G+ +D  VA +++ M
Sbjct: 481 FELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGM 540

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG +  AR++FD +  +D ++W  M+AGYG HG G +A+  F  M +  + P+E++ 
Sbjct: 541 YSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITL 600

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
            +V+ ACS +GLV EG   F MM+ +  + P+ +HY CMVDLL R G L EA  FI+ MP
Sbjct: 601 TAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMP 660

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
             PD ++W +LL  C+ H+ V+LAE+ A H+ ELEP     Y+ L+N+YA+A +W++  K
Sbjct: 661 CEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTK 720

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R  +  RGLKK+ G S IEI G+++ FVA   +HP    I + L+ L  EMK  GY P 
Sbjct: 721 VRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPD 780

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
            R+ L + D+++KE ALC HSEKLA+A+G+L  P+G  IR+ KNLRVCGDCH   KF+SK
Sbjct: 781 MRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISK 840

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
             +REIV RD+NRFH+F +G CSC  FW
Sbjct: 841 IRKREIVARDANRFHYFNNGTCSCGDFW 868


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 300/812 (36%), Positives = 454/812 (55%), Gaps = 47/812 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  + + G  +KA ++    + +    +  TY SIL  C     LE+GKK+HS I
Sbjct: 95  SWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQI 154

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G   D  V  S L+ M+  CGDL   R+VF  I    V  +N ++  Y++    KE 
Sbjct: 155 IKAGYQRDPRVQNS-LLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKEC 213

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL------------------- 223
           L LF +M S GI+ D  T+  +L            K  HKL                   
Sbjct: 214 LGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTM 273

Query: 224 -------------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                        F  ++DRDVV +N +I+    +G   +  E +  M + G  ++  T 
Sbjct: 274 CVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTY 333

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           +++L+ C+   AL  G+ +H+   +   S ++   N L+ MY++CGDL  A  +F  M +
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPK 393

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R ++SW ++IAGYAR      A+RL++ M  EG++P       +L ACA       GK +
Sbjct: 394 RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMI 453

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H+ I  + ++S+ +++NALM+MY +CGS+ +A++VF     +D++SWN+MI         
Sbjct: 454 HEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY 513

Query: 443 --ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             A  LF  M  +  EPD +T A +L  C +  ALE G++IHG I   G+  D N+ NA+
Sbjct: 514 ETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNAL 573

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP-D 558
           ++MY++CG L  AR++F  +  +D++SWT MI G    G    AI  F  M+  G  P D
Sbjct: 574 INMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPD 633

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
             +F S+L AC+H+GLV EG++ F+ M  E  + P +EHY C+V LL R     EA   I
Sbjct: 634 GSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLI 693

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
             MP  PDA +W +LL  CRIH  + LAE  A +  +L   N   Y+LL+NVYA A +W+
Sbjct: 694 NQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWD 753

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           +V K+R  +  RG++K PG SWIE+   ++ F+A   SHP   +I + LKRL +EM+  G
Sbjct: 754 DVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAG 813

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
           YFP T++ L +  +  +E +LC HSE+LA+A+G++  P G  IR+ KNLR+CGDCH  +K
Sbjct: 814 YFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASK 873

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           F+SK   REI+ RDSNRFH FK+G+CSC  +W
Sbjct: 874 FISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905



 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 167/594 (28%), Positives = 297/594 (50%), Gaps = 46/594 (7%)

Query: 87  YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG 146
           +    ++ D  TY ++LQ C   + L + K++H+ + E+G V  D  L + L+ M+V C 
Sbjct: 18  HQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAG-VGPDIFLSNLLINMYVKCR 76

Query: 147 DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
            + +  +VF ++    V  WN L+  Y++ G  K++  LF++MQ+ G   +  T+  +L 
Sbjct: 77  SVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILT 136

Query: 207 C--------------------------------LAVVGNSRRVKDAHKLFDELSDRDVVS 234
                                            L++ G    +  A ++F  +S RDVVS
Sbjct: 137 ACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVS 196

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           +N M+  Y      ++ L +F +M + G + D  T + +L        L  G+ +H   +
Sbjct: 197 YNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTV 256

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           +   + +I     L+ M  +CGD+D A + F+ + +R VV + ++IA  A+ G    A  
Sbjct: 257 EEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFE 316

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
            +  M  +G+  +     SIL+AC+    LE GK +H +I E+   S + + NAL+ MYA
Sbjct: 317 QYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMAC 463
           +CG +  A  +F  MP +D++SWN +I           A+ L+  M  +  +P  VT   
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           +L ACA+ +A   G+ IH  ILR GI ++ ++ANA+++MY +CG L+ A+++F+   A+D
Sbjct: 437 LLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARD 496

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           +ISW  MIAG+  HG    A   F +M+   +EPD ++F SVL  C +   ++ G +   
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
            +  E  ++  +     ++++  R G+L +A      +    D   W +++ GC
Sbjct: 557 RIT-ESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGC 608



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 216/444 (48%), Gaps = 16/444 (3%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D AT V +L  C     L   + +HA  ++A    +I  +N L++MY KC  +  A +V
Sbjct: 25  TDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQV 84

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F++M  R V+SW S+I+ YA++G    A +LF  M   G  P+     SIL AC     L
Sbjct: 85  FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
           E GK +H  I +   Q    V N+L+ MY KCG +  A  VF  +  +D+VS+NTM+G  
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204

Query: 443 --------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                    L LF  M  +   PD VT   +L A  + + L+ G+ IH   +  G+++D 
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI 264

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            V  A+V M V+CG +  A+  F  I  +D++ +  +IA    HG   +A   +  MR  
Sbjct: 265 RVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSD 324

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G+  +  +++S+L ACS S  ++ G +  +    E      ++    ++ + +R G+L +
Sbjct: 325 GVALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLANVY 671
           A      MP   D   W +++ G     +   A ++ + +    ++P    +  LL+   
Sbjct: 384 ARELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC- 441

Query: 672 AEAEKWEEVKKLREKISRRGLKKN 695
           A +  + + K + E I R G+K N
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSN 465



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 166/340 (48%), Gaps = 16/340 (4%)

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           E D     ++L  C    LL   K +H  + E  +   +++SN L++MY KC S+ DA  
Sbjct: 24  ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN--FEPDGVTMACILPACASLA 472
           VF +MP +D++SWN++I           A  LF  M QN  F P+ +T   IL AC S A
Sbjct: 84  VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEM-QNAGFIPNKITYISILTACYSPA 142

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
            LE G++IH  I++ G   D  V N+++ MY KCG L  AR +F  I  +D++S+  M+ 
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
            Y    +  + +  F  M   GI PD+V++I++L A +   ++DEG R   +   E  + 
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLT-VEEGLN 261

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH-HEVKLAEKVAE 651
             +     +V +  R G++  A +  + +    D  ++ +L+     H H V+  E+   
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGI-ADRDVVVYNALIAALAQHGHNVEAFEQYYR 320

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
              +    N   Y+ + N  + ++  E  K +   IS  G
Sbjct: 321 MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG 360


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/778 (38%), Positives = 449/778 (57%), Gaps = 45/778 (5%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
             Y  +L+ C   KSL + KK+H    ++    D  VL  KL  ++++C  +   RR+F+
Sbjct: 9   NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVL-HKLTRLYLSCNQVVLARRLFD 67

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---------- 206
           +I N  V +WN ++  Y+  G F  ++ L+  M  LG+  + YT+  VLK          
Sbjct: 68  EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 207 -------------------CLAVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGYIA 244
                              C A+V    +   + +A +LF  +S RDVV+WN MI+G   
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G+ +  +++  +M   G   + +T+V VL       AL  G+A+H + ++  F   +  
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV-REG 363
              LLDMY+KC  L  A ++F+ MG R+ VSW++MI GY        A+ LF  M+ ++ 
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDA 307

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           ++P    + S+L ACA    L  G+ +H YI +      + + N L+ MYAKCG + DA 
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAI 367

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLA 472
             F++M  KD VS++ ++           AL +F  M L   +PD  TM  +LPAC+ LA
Sbjct: 368 RFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLA 427

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           AL+ G   HGY++  G + D  + NA++DMY KCG +  AR +F+ +   D++SW  MI 
Sbjct: 428 ALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMII 487

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           GYG+HG G +A+  F+D+   G++PD+++FI +L +CSHSGLV EG  +F+ M  + +I 
Sbjct: 488 GYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIV 547

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P++EH  CMVD+L R G + EA+ FI  MP  PD  IW +LL  CRIH  ++L E+V++ 
Sbjct: 548 PRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKK 607

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           +  L P++TG +VLL+N+Y+ A +W++   +R      GLKK PGCSWIEI G V+ FV 
Sbjct: 608 IQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVG 667

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  SH    +I   L+ L +EMKR GY  +  +   + +E EKE  L  HSEKLA+AFGI
Sbjct: 668 GDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGI 727

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LNL AG+ I VTKNLRVCGDCH   KFM+   +REI +RD+NRFHHFK+G C+C  FW
Sbjct: 728 LNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 173/399 (43%), Gaps = 76/399 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS-EKSKIDTK--TYCSILQLCADLKSLEDGKKVHSI 121
           +++A IG +     +++A+E+      K  +D    T  S+L+ CA L  L  G+K+H  
Sbjct: 278 SWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCY 337

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I + G V+D  +LG+ L+ M+  CG + +  R F++++      ++ ++    + GN   
Sbjct: 338 IIKLGSVLDI-LLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAV 396

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLK-----------------------------CLAVV- 211
           +L +F+ MQ  GI  D  T   VL                              C A++ 
Sbjct: 397 ALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALID 456

Query: 212 --GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                 ++  A ++F+ +   D+VSWN MI GY  +G+  + L +F ++L LG   D  T
Sbjct: 457 MYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDIT 516

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            + +LS C++ G +M GR          +   +S + +++     C              
Sbjct: 517 FICLLSSCSHSGLVMEGRL---------WFDAMSRDFSIVPRMEHC-------------- 553

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
                    M+    R G+ D A    R M     EPDV   +++L AC     +E+G++
Sbjct: 554 -------ICMVDILGRAGLIDEAHHFIRNM---PFEPDVRIWSALLSACRIHKNIELGEE 603

Query: 390 VHDYIKENDMQSS---LYVSNALMDMYAKCGSMADAESV 425
           V   I+    +S+   + +SN    +Y+  G   DA  +
Sbjct: 604 VSKKIQSLGPESTGNFVLLSN----IYSAAGRWDDAAHI 638



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 19/273 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDT--KTYCSILQLCADLKSLEDGKKVHSII 122
           +++A +    + GN   A+ +    + S ID    T   +L  C+ L +L+ G   H  +
Sbjct: 380 SFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYL 439

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G   D  ++ + L+ M+  CG +   R VFN++D   +  WN ++  Y   G   E+
Sbjct: 440 IVRGFATDT-LICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEA 498

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVSWN----C 237
           L LF  + +LG+  D  TF C+L   +   +S  V +    FD +S D  +V       C
Sbjct: 499 LGLFHDLLALGLKPDDITFICLLSSCS---HSGLVMEGRLWFDAMSRDFSIVPRMEHCIC 555

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+      G+ ++     +   N+ F  D+     +LS C     +  G  V        
Sbjct: 556 MVDILGRAGLIDEAHHFIR---NMPFEPDVRIWSALLSACRIHKNIELGEEVSKKI--QS 610

Query: 298 FSKEISFNNTLL-DMYSKCGDLDGA--IRVFEK 327
              E + N  LL ++YS  G  D A  IR+ +K
Sbjct: 611 LGPESTGNFVLLSNIYSAAGRWDDAAHIRITQK 643


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 300/782 (38%), Positives = 444/782 (56%), Gaps = 44/782 (5%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           + ID++TY  + Q C  L+    GK+V   I +SG  ++   L + L+ +   CG++ E 
Sbjct: 57  NHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNT-LIKLHSICGNMLEA 115

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
           R+ F+ ++N  V  WN ++  Y++ G+ KE+  LF++M    +     TF  VL   +  
Sbjct: 116 RQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSP 175

Query: 212 GNSRRVKDAH--------------------------------KLFDELSDRDVVSWNCMI 239
              +  K+ H                                ++FD L  RDV ++N MI
Sbjct: 176 AGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMI 235

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
            GY  +G  EK  ++F  M   GF  +  + +++L GC+   AL +G+AVHA  +     
Sbjct: 236 GGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLV 295

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            ++     L+ MY  CG ++GA RVF+KM  R VVSWT MI GYA     + A  LF  M
Sbjct: 296 DDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATM 355

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             EGI+PD      I++ACA    L + +++H  +      + L V  AL+ MYAKCG++
Sbjct: 356 QEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAI 415

Query: 420 ADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPAC 468
            DA  VF+ M  +D+VSW+ MIGA           + F  M +N  EPD VT   +L AC
Sbjct: 416 KDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNAC 475

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
             L AL+ G EI+   ++  + +   V NA+++M VK G +  AR +F+ +  +D+++W 
Sbjct: 476 GHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWN 535

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
           +MI GY +HG   +A+  F+ M +    P+ V+F+ VL ACS +G V+EG RFF+ +   
Sbjct: 536 VMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDG 595

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             I P +E Y CMVDLL R G L EA   I  MP+ P+++IW +LL  CRI+  + +AE+
Sbjct: 596 RGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAER 655

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            AE     EP +   YV L+++YA A  WE V K+R+ +  RG++K  GC+WIE++GK++
Sbjct: 656 AAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLH 715

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            FV    SHP A +I + L RL   +KREGY P T+  L N  E EKE A+  HSEKLA+
Sbjct: 716 TFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAI 775

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           A+G+L+LP+G  IR+ KNLRVCGDCH  +KF+SK   REI+ RD++RFHHFK+G CSC  
Sbjct: 776 AYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGD 835

Query: 829 FW 830
           +W
Sbjct: 836 YW 837


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/778 (38%), Positives = 448/778 (57%), Gaps = 45/778 (5%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
             Y  +L+ C   KSL + KK+H    ++    D  VL  KL  ++++C  +   RR+F+
Sbjct: 9   NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVL-HKLTRLYLSCNQVVLARRLFD 67

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---------- 206
           +I N  V +WN ++  Y+  G F  ++ L+  M  LG+  + YT+  VLK          
Sbjct: 68  EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 207 -------------------CLAVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGYIA 244
                              C A+V    +   + +A +LF  +S RDVV+WN MI+G   
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G+ +  +++  +M   G   + +T+V VL       AL  G+A+H + ++  F   +  
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV-REG 363
              LLDMY+KC  L  A ++F+ MG R+ VSW++MI GY        A+ LF  M+ ++ 
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDA 307

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           ++P    + S+L ACA    L  G+ +H YI +      + + N L+ MYAKCG + DA 
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAI 367

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLA 472
             F+ M  KD VS++ ++           AL +F  M L   +PD  TM  +LPAC+ LA
Sbjct: 368 RFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLA 427

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           AL+ G   HGY++  G + D  + NA++DMY KCG +  AR +F+ +   D++SW  MI 
Sbjct: 428 ALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMII 487

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           GYG+HG G +A+  F+D+   G++PD+++FI +L +CSHSGLV EG  +F+ M  + +I 
Sbjct: 488 GYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIV 547

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P++EH  CMVD+L R G + EA+ FI  MP  PD  IW +LL  CRIH  ++L E+V++ 
Sbjct: 548 PRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKK 607

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           +  L P++TG +VLL+N+Y+ A +W++   +R      GLKK PGCSWIEI G V+ FV 
Sbjct: 608 IQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVG 667

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  SH    +I   L+ L +EMKR GY  +  +   + +E EKE  L  HSEKLA+AFGI
Sbjct: 668 GDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGI 727

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LNL AG+ I VTKNLRVCGDCH   KFM+   +REI +RD+NRFHHFK+G C+C  FW
Sbjct: 728 LNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 172/399 (43%), Gaps = 76/399 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS-EKSKIDTK--TYCSILQLCADLKSLEDGKKVHSI 121
           +++A IG +     +++A+E+      K  +D    T  S+L+ CA L  L  G+K+H  
Sbjct: 278 SWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCY 337

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I + G V+D  +LG+ L+ M+  CG + +  R F+ ++      ++ ++    + GN   
Sbjct: 338 IIKLGXVLDI-LLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAV 396

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLK-----------------------------CLAVV- 211
           +L +F+ MQ  GI  D  T   VL                              C A++ 
Sbjct: 397 ALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALID 456

Query: 212 --GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                 ++  A ++F+ +   D+VSWN MI GY  +G+  + L +F ++L LG   D  T
Sbjct: 457 MYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDIT 516

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            + +LS C++ G +M GR          +   +S + +++     C              
Sbjct: 517 FICLLSSCSHSGLVMEGRL---------WFDAMSRDFSIVPRMEHC-------------- 553

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
                    M+    R G+ D A    R M     EPDV   +++L AC     +E+G++
Sbjct: 554 -------ICMVDILGRAGLIDEAHHFIRNM---PFEPDVRIWSALLSACRIHKNIELGEE 603

Query: 390 VHDYIKENDMQSS---LYVSNALMDMYAKCGSMADAESV 425
           V   I+    +S+   + +SN    +Y+  G   DA  +
Sbjct: 604 VSKKIQSLGPESTGNFVLLSN----IYSAAGRWDDAAHI 638



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 19/273 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDT--KTYCSILQLCADLKSLEDGKKVHSII 122
           +++A +    + GN   A+ +    + S ID    T   +L  C+ L +L+ G   H  +
Sbjct: 380 SFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYL 439

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G   D  ++ + L+ M+  CG +   R VFN++D   +  WN ++  Y   G   E+
Sbjct: 440 IVRGFATDT-LICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEA 498

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVSWN----C 237
           L LF  + +LG+  D  TF C+L   +   +S  V +    FD +S D  +V       C
Sbjct: 499 LGLFHDLLALGLKPDDITFICLLSSCS---HSGLVMEGRLWFDAMSRDFSIVPRMEHCIC 555

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+      G+ ++     +   N+ F  D+     +LS C     +  G  V        
Sbjct: 556 MVDILGRAGLIDEAHHFIR---NMPFEPDVRIWSALLSACRIHKNIELGEEVSKKI--QS 610

Query: 298 FSKEISFNNTLL-DMYSKCGDLDGA--IRVFEK 327
              E + N  LL ++YS  G  D A  IR+ +K
Sbjct: 611 LGPESTGNFVLLSNIYSAAGRWDDAAHIRITQK 643


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 317/889 (35%), Positives = 490/889 (55%), Gaps = 88/889 (9%)

Query: 16  SPPNQSYGKKFASYKPSTLPIIVSSK----SHSSCTINPISASISKTLVCKTKNYNAEIG 71
           SPP+       +  KP+  P+   +     S S  T + + A  S+T   ++ ++   I 
Sbjct: 22  SPPSLQTQPPPSIQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRT---RSNDFREAIS 78

Query: 72  RFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDD 131
            + E+           +   ++ D   + ++L+  + L+ L+ G+++H+   + G     
Sbjct: 79  TYIEM-----------TVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSS 127

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
             + + LV M+  CG + +  +VF++I +     WN  +    +   ++++L  F+ MQ 
Sbjct: 128 VTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQM 187

Query: 192 LGIAADSYTF-SCVLKC--LAV----------------VGNSR---------------RV 217
             +   S+T  S  L C  L V                VG+ +               RV
Sbjct: 188 ENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFTNNALMAMYAKLGRV 247

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
            D+  LF+   DRD+VSWN MIS +  +    + L  F+ M+  G  +D  T+ +VL  C
Sbjct: 248 DDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPAC 307

Query: 278 ANCGALMFGRAVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           ++   L  G+ +HA+ L+     E SF  + L+DMY  C  ++   RVF+ +  R +  W
Sbjct: 308 SHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELW 367

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
            +MI+GYAR G+ + A+ LF  M++  G+ P+   + S++ AC         + +H Y  
Sbjct: 368 NAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAV 427

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALD 445
           +   +   YV NALMDMY++ G M  +E++F+ M V+D VSWNTMI           AL 
Sbjct: 428 KLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALV 487

Query: 446 LFVAM--LQN----------------FEPDGVTMACILPACASLAALERGREIHGYILRH 487
           L   M  ++N                ++P+ +T+  +LP CA+LAA+ +G+EIH Y +R+
Sbjct: 488 LLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRN 547

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
            +++D  V +A+VDMY KCG L L+R +F+ +P K++I+W ++I   GMHG G +A+  F
Sbjct: 548 MLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELF 607

Query: 548 NDM-----RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
            +M     R    +P+EV+FI+V  ACSHSGL+ EG   F  M+++  +EP  +HYAC+V
Sbjct: 608 KNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVV 667

Query: 603 DLLSRTGNLSEAYRFIEMMPVAPDAT-IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNT 661
           DLL R G L EAY  +  MP   D    W SLL  CRIH  V+L E  A+++  LEP+  
Sbjct: 668 DLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVA 727

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK 721
            +YVLL+N+Y+ A  W +  ++R+ + + G+KK PGCSWIE + +V+ F+AG  SHP ++
Sbjct: 728 SHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSE 787

Query: 722 KIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
           ++   L+ L  +M++EGY P T   L N DE EKE  LCGHSEKLA+AFGILN P G TI
Sbjct: 788 QLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTI 847

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           RV KNLRVC DCH   KF+SK   REI++RD  RFHHFK+G CSC  +W
Sbjct: 848 RVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 286/772 (37%), Positives = 456/772 (59%), Gaps = 48/772 (6%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L+LC  LK L    ++  +I ++G   ++ +  +KL+ +F     + E  RVF  +++ 
Sbjct: 50  LLELCTSLKELH---QILPLIIKNGFY-NEHLFQTKLISLFCKFNSITEAARVFEPVEHK 105

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-------------- 207
              +++ ++  Y+K    ++++  +++M+   +    Y F+ +L+               
Sbjct: 106 LDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIH 165

Query: 208 ---------------LAVV---GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                           AVV      R+++DA+K+F+ +  RD+VSWN +++GY  NG A 
Sbjct: 166 GMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFAR 225

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + ++V  +M   G   D  T+V+VL   A+  AL  GR++H +A +A F   ++    +L
Sbjct: 226 RAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAML 285

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           D Y KCG +  A  VF+ M  R+VVSW +MI GYA+ G  + A   F  M+ EG+EP   
Sbjct: 286 DTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNV 345

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           ++   LHACA  G LE G+ VH  + E  +   + V N+L+ MY+KC  +  A SVF  +
Sbjct: 346 SMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNL 405

Query: 430 PVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVTMACILPACASLAALERGR 478
             K +V+WN MI           AL+LF  M   + +PD  T+  ++ A A L+   + +
Sbjct: 406 KHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAK 465

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
            IHG  +R  +  +  V  A++D + KCG +  AR LFD++  + +I+W  MI GYG +G
Sbjct: 466 WIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNG 525

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
            G +A+  FN+M+   ++P+E++F+SV+ ACSHSGLV+EG  +F  M+    +EP ++HY
Sbjct: 526 HGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHY 585

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
             MVDLL R G L +A++FI+ MPV P  T+ G++L  CRIH  V+L EK A+ +F+L+P
Sbjct: 586 GAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDP 645

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
           D+ GY+VLLAN+YA A  W++V ++R  + ++G++K PGCS +E++ +V+ F +G ++HP
Sbjct: 646 DDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHP 705

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
            +K+I + L+ L  EMK  GY P T  ++ + +E  KE  L  HSE+LA+AFG+LN   G
Sbjct: 706 QSKRIYAYLETLGDEMKAAGYVPDTN-SIHDVEEDVKEQLLSSHSERLAIAFGLLNTRHG 764

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             I + KNLRVCGDCHE  K++S    REI++RD  RFHHFK+G CSC  +W
Sbjct: 765 TAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 231/500 (46%), Gaps = 57/500 (11%)

Query: 72  RFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDD 131
           RF E    ++ M V+Y           +  +LQL  +   L  G+++H ++  +G   + 
Sbjct: 128 RFYERMRCDEVMPVVYD----------FTYLLQLSGENLDLRRGREIHGMVITNGFQSNL 177

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
             + + +V ++  C  +++  ++F ++    +  WN ++  Y++ G  + ++ +  +MQ 
Sbjct: 178 FAM-TAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQE 236

Query: 192 LGIAADSYTFSCVLKCLAVVGNSR--------------------------------RVKD 219
            G   DS T   VL  +A +   R                                 V+ 
Sbjct: 237 AGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRS 296

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +F  +S R+VVSWN MI GY  NG +E+    F +ML+ G      +M+  L  CAN
Sbjct: 297 ARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACAN 356

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
            G L  GR VH    +     ++S  N+L+ MYSKC  +D A  VF  +  ++VV+W +M
Sbjct: 357 LGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAM 416

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I GYA+ G  + A+ LF  M    I+PD + + S++ A A   +    K +H       M
Sbjct: 417 ILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLM 476

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
             +++V  AL+D +AKCG++  A  +F+ M  + +++WN MI           ALDLF  
Sbjct: 477 DKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNE 536

Query: 450 MLQN--FEPDGVTMACILPACASLAALERGR-EIHGYILRHGISADRNVANAIVDMYVKC 506
           M QN   +P+ +T   ++ AC+    +E G          +G+    +   A+VD+  + 
Sbjct: 537 M-QNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRA 595

Query: 507 GVLVLARSLFDMIPAKDLIS 526
           G L  A      +P K  I+
Sbjct: 596 GRLDDAWKFIQDMPVKPGIT 615



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 193/415 (46%), Gaps = 37/415 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +  + + G   +A++V+   +++  K D+ T  S+L   ADLK+L  G+ +H   
Sbjct: 210 SWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYA 269

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +G      V  + ++  +  CG ++  R VF  + +  V  WN ++  Y++ G  +E+
Sbjct: 270 FRAGFEYMVNV-ATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEA 328

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE---------------- 226
              F KM   G+   + +    L   A +G+  R +  H+L DE                
Sbjct: 329 FATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISM 388

Query: 227 ----------------LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                           L  + VV+WN MI GY  NG   + L +F EM +     D  T+
Sbjct: 389 YSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTL 448

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           V+V++  A+       + +H  A++    K +     L+D ++KCG +  A ++F+ M E
Sbjct: 449 VSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQE 508

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R V++W +MI GY   G    A+ LF  M    ++P+     S++ AC+  GL+E G   
Sbjct: 509 RHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYY 568

Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD-IVSWNTMIGA 443
            + +KEN  ++ ++    A++D+  + G + DA      MPVK  I     M+GA
Sbjct: 569 FESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGA 623



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 144/318 (45%), Gaps = 40/318 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  + + G  E+A         E  +    +    L  CA+L  LE G+ VH ++
Sbjct: 311 SWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLL 370

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            E  I  D  V+ S L+ M+  C  +     VF  + +  V  WN ++  Y++ G   E+
Sbjct: 371 DEKKIGFDVSVMNS-LISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEA 429

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK----------------------DA 220
           L LF +MQS  I  DS+T   V+  LA +  +R+ K                      D 
Sbjct: 430 LNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDT 489

Query: 221 H----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
           H          KLFD + +R V++WN MI GY  NG   + L++F EM N     +  T 
Sbjct: 490 HAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITF 549

Query: 271 VTVLSGCANCGALMFGRAVHAF-ALKACFSKEISFNN--TLLDMYSKCGDLDGAIRVFEK 327
           ++V++ C++ G +  G  ++ F ++K  +  E + ++   ++D+  + G LD A +  + 
Sbjct: 550 LSVIAACSHSGLVEEG--MYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQD 607

Query: 328 MGERSVVSWTSMIAGYAR 345
           M  +  ++    + G  R
Sbjct: 608 MPVKPGITVLGAMLGACR 625


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 277/669 (41%), Positives = 406/669 (60%), Gaps = 55/669 (8%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V+DA ++FD++S+R+V SW  ++  Y   G  E+ +++F  M+N G   D      V   
Sbjct: 61  VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKA 120

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C+       G+ V+ + L   F        ++LDM+ KCG +D A R FE++  + V  W
Sbjct: 121 CSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMW 180

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY-IK 395
             M++GY  +G F  A+ +FR MV EG++P+   I S + AC    LL  G+++H Y IK
Sbjct: 181 NIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 240

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAE-------------------------------- 423
             ++ S L V N+L+D YAKC S+  A                                 
Sbjct: 241 VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAA 300

Query: 424 -----------SVFNQMPVKDIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTM 461
                      SVF+++  +D+V WN++I A          LDL   M L N E + VTM
Sbjct: 301 LEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTM 360

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
              LPAC+ LAAL +G+EIH +I+R G+     + N+++DMY +CG +  +R +FD++P 
Sbjct: 361 VSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ 420

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           +DL+SW +MI+ YGMHGFG DA+  F   R  G++P+ ++F ++L ACSHSGL++EGW++
Sbjct: 421 RDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKY 480

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           F MM+ E  ++P +E YACMVDLLSR G  +E   FIE MP  P+A +WGSLL  CRIH 
Sbjct: 481 FKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHC 540

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
              LAE  A ++FELEP ++G YVL+AN+Y+ A +WE+  K+R  +  RG+ K PGCSWI
Sbjct: 541 NPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWI 600

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCG 761
           E+K K++ FV G +SHP  ++I + ++ L  ++K  GY P T + L + DE EKE +LCG
Sbjct: 601 EVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCG 660

Query: 762 HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKD 821
           HSEK+A+AFG+++  AG  +R+ KNLRVCGDCH   KF+SK  +R+I++RD+ RFHHF D
Sbjct: 661 HSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVD 720

Query: 822 GRCSCRGFW 830
           G CSC  +W
Sbjct: 721 GVCSCGDYW 729



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 215/468 (45%), Gaps = 88/468 (18%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + Y SILQ C  L +L  G +VH+ +  +G+ + +  LGS+L+ ++   G +++ RR+F+
Sbjct: 11  EIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE-FLGSRLLEVYCQTGCVEDARRMFD 69

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           K+    VF W  +M  Y   G+++E++ LF  M + G+  D + F  V K  + + N R 
Sbjct: 70  KMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRV 129

Query: 217 VKD--------------------------------AHKLFDELSDRDVVSWNCMISGYIA 244
            KD                                A + F+E+  +DV  WN M+SGY +
Sbjct: 130 GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTS 189

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA-CFSKEIS 303
            G  +K L VF++M+  G   +  T+ + +S C N   L  GR +H + +K      ++ 
Sbjct: 190 KGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLL 249

Query: 304 FNNTLLDMYSKC---------------------------------GDLDGAIRVFEKM-- 328
             N+L+D Y+KC                                 GD   A+  F++M  
Sbjct: 250 VGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHI 309

Query: 329 --------GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
                     R VV W S+I+  A+ G    A+ L R M    +E +   + S L AC+ 
Sbjct: 310 ACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSK 369

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              L  GK++H +I    + +  ++ N+L+DMY +CGS+  +  +F+ MP +D+VSWN M
Sbjct: 370 LAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVM 429

Query: 441 IGALDLF------VAMLQNF-----EPDGVTMACILPACASLAALERG 477
           I    +       V + Q F     +P+ +T   +L AC+    +E G
Sbjct: 430 ISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG 477



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 197/418 (47%), Gaps = 57/418 (13%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++L  C     L  G  VHA  +           + LL++Y + G ++ A R+F+KM ER
Sbjct: 15  SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 74

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           +V SWT+++  Y   G ++  I+LF  MV EG+ PD +    +  AC+      +GKDV+
Sbjct: 75  NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 134

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
           DY+     + +  V  +++DM+ KCG M  A   F ++  KD+  WN M+          
Sbjct: 135 DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFK 194

Query: 443 -ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAI 499
            AL++F  M L+  +P+ +T+A  + AC +L+ L  GREIHGY ++   + +D  V N++
Sbjct: 195 KALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSL 254

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA--GYGMHGFGCDAIATFNDMR------ 551
           VD Y KC  + +AR  F MI   DL+SW  M+A  G+  +G G  A+  F  M       
Sbjct: 255 VDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVF 314

Query: 552 -------------------QAG----------------IEPDEVSFISVLYACSHSGLVD 576
                              Q+G                +E + V+ +S L ACS    + 
Sbjct: 315 SELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALR 374

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           +G      +   C ++        ++D+  R G++ ++ R  ++MP   D   W  ++
Sbjct: 375 QGKEIHQFI-IRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMI 430



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 177/384 (46%), Gaps = 34/384 (8%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  +  +   G  +KA+ V      E  K ++ T  S +  C +L  L  G+++H    
Sbjct: 180 WNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCI 239

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWN--LLMHEYSKTGNFKE 181
           +   +  D ++G+ LV  +  C  ++  RR F  I    +  WN  L +  +++ G+ K 
Sbjct: 240 KVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKA 299

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
           +L  F++M                              A  +F ELS RDVV WN +IS 
Sbjct: 300 ALEFFQRMHI----------------------------ACSVFSELSTRDVVVWNSIISA 331

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
              +G +   L++ +EM      V+  TMV+ L  C+   AL  G+ +H F ++      
Sbjct: 332 CAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTC 391

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
               N+L+DMY +CG +  + R+F+ M +R +VSW  MI+ Y   G    A+ LF+    
Sbjct: 392 NFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRT 451

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMA 420
            G++P+    T++L AC+  GL+E G      +K E  M  ++     ++D+ ++ G   
Sbjct: 452 MGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFN 511

Query: 421 DAESVFNQMPVK-DIVSWNTMIGA 443
           +      +MP + +   W +++GA
Sbjct: 512 ETLEFIEKMPFEPNAAVWGSLLGA 535



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 131/279 (46%), Gaps = 21/279 (7%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ I    + G    A+++L     S  +++T T  S L  C+ L +L  GK++H  I 
Sbjct: 325 WNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFII 384

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             G+   + +L S L+ M+  CG +++ RR+F+ +    +  WN+++  Y   G   +++
Sbjct: 385 RCGLDTCNFILNS-LIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAV 443

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-----DRDVVSWNCM 238
            LF++ +++G+  +  TF+     L+   +S  +++  K F  +      D  V  + CM
Sbjct: 444 NLFQQFRTMGLKPNHITFT---NLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACM 500

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC-ANCGA-LMFGRAVHAFALKA 296
           +      G   + LE  ++M    F  + A   ++L  C  +C   L    A + F L+ 
Sbjct: 501 VDLLSRAGQFNETLEFIEKM---PFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEP 557

Query: 297 CFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSVV 334
               + S N  L+ ++YS  G  + A ++   M ER V 
Sbjct: 558 ----QSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVT 592



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 10/192 (5%)

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
           A IL  C  L  L  G ++H  ++ +G+     + + ++++Y + G +  AR +FD +  
Sbjct: 14  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 73

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           +++ SWT ++  Y   G   + I  F  M   G+ PD   F  V  ACS       G   
Sbjct: 74  RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 133

Query: 582 FNMMRYECNIEPKLEHYAC----MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           ++ M     +    E  +C    ++D+  + G +  A RF E +    D  +W  ++ G 
Sbjct: 134 YDYM-----LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF-KDVFMWNIMVSGY 187

Query: 638 RIHHEVKLAEKV 649
               E K A  V
Sbjct: 188 TSKGEFKKALNV 199


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/800 (37%), Positives = 469/800 (58%), Gaps = 50/800 (6%)

Query: 73  FCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
            C  G LE+AM++L S ++ ++  D   + ++++LC   ++ E+G KV+SI   S   + 
Sbjct: 69  LCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL- 127

Query: 131 DGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
            GV LG+  + MFV  G+L +   VF K+    +F WN+L+  Y+K G F E++ L+ +M
Sbjct: 128 -GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186

Query: 190 QSLG-IAADSYTFSCVLKCLAVVGNSRR-------------------------------- 216
             +G +  D YTF CVL+    + +  R                                
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           VK A  LFD +  RD++SWN MISGY  NG+  +GLE+F  M  L  + DL T+ +V+S 
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C   G    GR +HA+ +   F+ +IS  N+L  MY   G    A ++F +M  + +VSW
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSW 366

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T+MI+GY    + D AI  +R M ++ ++PD   + ++L ACA  G L+ G ++H    +
Sbjct: 367 TTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK 426

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL----FVAML- 451
             + S + V+N L++MY+KC  +  A  +F+ +P K+++SW ++I  L L    F A++ 
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIF 486

Query: 452 -----QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
                   +P+ +T+   L ACA + AL  G+EIH ++LR G+  D  + NA++DMYV+C
Sbjct: 487 LRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRC 546

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G +  A S F+    KD+ SW I++ GY   G G   +  F+ M ++ + PDE++FIS+L
Sbjct: 547 GRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLL 605

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
             CS S +V +G  +F+ M  +  + P L+HYAC+VDLL R G L EA++FI+ MPV PD
Sbjct: 606 CGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPD 664

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
             +WG+LL  CRIHH++ L E  A+H+FEL+  + GYY+LL N+YA+  KW EV K+R  
Sbjct: 665 PAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRM 724

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +   GL  + GCSW+E+KGKV+ F++    HP  K+I ++L+    +M   G    +  +
Sbjct: 725 MKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESS 784

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
            ++  E+ ++   CGHSE+ A+AFG++N   G  I VTKNL +C +CH+  KF+SKT RR
Sbjct: 785 SMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRR 844

Query: 807 EIVLRDSNRFHHFKDGRCSC 826
           EI +RD+  FHHFKDG CSC
Sbjct: 845 EISVRDAEHFHHFKDGECSC 864



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 216/420 (51%), Gaps = 22/420 (5%)

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           + G  ANG  E+ +++   M  L   VD    V ++  C    A   G  V++ AL +  
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
           S  +   N  L M+ + G+L  A  VF KM ER++ SW  ++ GYA++G FD A+ L+  
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185

Query: 359 MVR-EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
           M+   G++PDVY    +L  C     L  GK+VH ++     +  + V NAL+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILP 466
            +  A  +F++MP +DI+SWN MI            L+LF AM   + +PD +T+  ++ 
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
           AC  L     GR+IH Y++  G + D +V N++  MY+  G    A  LF  +  KD++S
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           WT MI+GY  +     AI T+  M Q  ++PDE++  +VL AC+  G +D G        
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL----- 420

Query: 587 YECNIEPKLEHYAC----MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
           ++  I+ +L  Y      ++++ S+   + +A      +P   +   W S++ G R+++ 
Sbjct: 421 HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNR 479



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 243/521 (46%), Gaps = 52/521 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS----EKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++N  +G + + G  ++AM  LY         K D  T+  +L+ C  +  L  GK+VH 
Sbjct: 162 SWNVLVGGYAKQGYFDEAM-CLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHV 220

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            +   G  +D  V+ + L+ M+V CGD+K  R +F+++    +  WN ++  Y + G   
Sbjct: 221 HVVRYGYELDIDVVNA-LITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------- 221
           E L LF  M+ L +  D  T + V+    ++G+ R  +D H                   
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339

Query: 222 -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                        KLF  +  +D+VSW  MISGY  N + +K ++ ++ M       D  
Sbjct: 340 QMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+  VLS CA  G L  G  +H  A+KA     +   N L++MYSKC  +D A+ +F  +
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI 459

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             ++V+SWTS+IAG         A+   R M +  ++P+   +T+ L ACA  G L  GK
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGK 518

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----- 443
           ++H ++    +    ++ NAL+DMY +CG M  A S FN    KD+ SWN ++       
Sbjct: 519 EIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERG 577

Query: 444 -----LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                ++LF  M+++   PD +T   +L  C+    + +G      +  +G++ +     
Sbjct: 578 QGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYA 637

Query: 498 AIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
            +VD+  + G L  A      +P   D   W  ++    +H
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIH 678


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 305/848 (35%), Positives = 476/848 (56%), Gaps = 53/848 (6%)

Query: 33  TLPIIVSSK--SHSSCTINPISASISKTLVCKTKN---YNAEIGRFCEVGNLEKAMEVLY 87
           +L +I S K  S  +   +PIS+      +  T N   +N+ I      G   +A+    
Sbjct: 51  SLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYT 110

Query: 88  SSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
              + K+  D  T+ S++  CA +  LE G  VH    E G    D  +G+ L+ M+   
Sbjct: 111 EMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFE-SDLYIGNALIDMYSRF 169

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
            DL   R VF ++ N     WN L+  Y   G ++++L ++ K +  G+  D +T S VL
Sbjct: 170 VDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVL 229

Query: 206 KCLA------------------------VVGNS--------RRVKDAHKLFDELSDRDVV 233
                                       ++GN          R+++A ++F +++ +D V
Sbjct: 230 LACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSV 289

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           +WN MI GY   G  E  +++F +M++ GF  D+ ++ + +  C   G L  G+ VH + 
Sbjct: 290 TWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYL 348

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           + + F  +    N L+DMY+KCGDL  A  VF+    +  V+W S+I GY + G +   +
Sbjct: 349 IGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGL 408

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
             F+ M  E  +PD      +L   +    +  G+ +H  + +   ++ L + N+L+D+Y
Sbjct: 409 ESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVY 467

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE-----------PDGVTMA 462
           AKCG M D   VF+ M   DI+SWNT+I +   F      F+           PD  T+ 
Sbjct: 468 AKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVL 527

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            ILP C+ LA   +G+EIHGYI + G  ++  + NA+++MY KCG L     +F  +  K
Sbjct: 528 GILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK 587

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           D+++WT +I+ +GM+G G  A+  F DM  +G+ PD V+FI+ ++ACSHSG+V EG RFF
Sbjct: 588 DVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFF 647

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
           + M+ + N+EP++EHYAC+VDLL+R+G L++A  FI  MP+ PDA++WG+LL  CR    
Sbjct: 648 DRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGN 707

Query: 643 VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIE 702
             +A++V++ + EL  D+TGYYVL++N+YA   KW++VK +R  +  +GLKK PG SWIE
Sbjct: 708 TNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIE 767

Query: 703 IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGH 762
           I+ +V +F  G  S     K++ LL+ L   M +EGY    ++AL + +E +K   LCGH
Sbjct: 768 IQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGH 827

Query: 763 SEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
           SE+LA+AFG+LN   G  + V KNLRVCGDCH + K+++K  +REI++RD+NRFH FKDG
Sbjct: 828 SERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDG 887

Query: 823 RCSCRGFW 830
            CSC   W
Sbjct: 888 ACSCGDHW 895



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 179/614 (29%), Positives = 296/614 (48%), Gaps = 53/614 (8%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID- 159
           S+L+  +  K+    + VHS+I  SG+ +   +   KL+  +    D      VF  I  
Sbjct: 24  SLLKTLSSAKNTPQLRTVHSLIITSGLSL-SVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA---------- 209
              V++WN ++   +  G F ++L  + +M+   +  D++TF  V+   A          
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142

Query: 210 --------------VVGN------SRRV--KDAHKLFDELSDRDVVSWNCMISGYIANGV 247
                          +GN      SR V   +A  +F+E+S+RD VSWN +ISGY +NG 
Sbjct: 143 VHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF 202

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
            E  L+++ +    G   D  TM +VL  C +  A+  G AVH    K   + ++   N 
Sbjct: 203 WEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           LL MY K   L  A RVF KM  +  V+W +MI GYA+ G  + +++LF  M+ +G  PD
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPD 321

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
           + +ITS + AC   G L++GK VH Y+  +  +      N L+DMYAKCG +  A+ VF+
Sbjct: 322 MLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFD 381

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERG 477
               KD V+WN++I            L+ F  M    +PD VT   +L   + LA + +G
Sbjct: 382 TTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQG 441

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           R IH  +++ G  A+  + N+++D+Y KCG +     +F  + A D+ISW  +IA   +H
Sbjct: 442 RGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIAS-SVH 500

Query: 538 GFGCD-AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
              C       N+MR  G+ PDE + + +L  CS   +  +G      + ++   E  + 
Sbjct: 501 FDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYI-FKSGFESNVP 559

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
               ++++ S+ G+L    +  + M    D   W +L+    ++ E K A K  + + EL
Sbjct: 560 IGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYGEGKKALKAFQDM-EL 617

Query: 657 E---PDNTGYYVLL 667
               PD+  +   +
Sbjct: 618 SGVLPDSVAFIAFI 631


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 320/816 (39%), Positives = 453/816 (55%), Gaps = 99/816 (12%)

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG---RRVFNKIDNGKVFIW 166
           K++   K +H  +   GI+  +  L S L+  +++ G L       R F   D G V+ W
Sbjct: 39  KTISQVKLIHQKLLSFGILTLN--LTSHLISTYISVGCLSHAVSLLRRFPPSDAG-VYHW 95

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----------------- 209
           N L+  Y   G   + LYLF  M SL    D+YTF  V K                    
Sbjct: 96  NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155

Query: 210 -------VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                   VGN+        R + DA K+FDE+S  DVVSWN +I  Y   G  +  LE+
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215

Query: 255 FKEMLN-LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           F  M N  G   D  T+V VL  CA+ G    G+ +H FA+ +   + +   N L+DMY+
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF----------------- 356
           KCG +D A  VF  M  + VVSW +M+AGY++ G F+ A+RLF                 
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335

Query: 357 ------------------RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY----- 393
                             R M+  GI+P+   + S+L  CA  G L  GK++H Y     
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395

Query: 394 --IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK--DIVSWNTMIG------- 442
             +++N       V N L+DMYAKC  +  A ++F+ +  K  D+V+W  MIG       
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455

Query: 443 ---ALDLFVAMLQ---NFEPDGVTMACILPACASLAALERGREIHGYILRHGISA-DRNV 495
              AL+L   M +      P+  T++C L ACASLAAL  G++IH Y LR+  +A    V
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
           +N ++DMY KCG +  AR +FD + AK+ ++WT ++ GYGMHG+G +A+  F++MR+ G 
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           + D V+ + VLYACSHSG++D+G  +FN M+    + P  EHYAC+VDLL R G L+ A 
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
           R IE MP+ P   +W + L  CRIH +V+L E  AE + EL  ++ G Y LL+N+YA A 
Sbjct: 636 RLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAG 695

Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIE-IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
           +W++V ++R  +  +G+KK PGCSW+E IKG    FV G  +HPHAK+I  +L      +
Sbjct: 696 RWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV-GDKTHPHAKEIYQVLLDHMQRI 754

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           K  GY P+T +AL + D+ EK+  L  HSEKLA+A+GIL  P G  IR+TKNLRVCGDCH
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               +MS+    +I+LRDS+RFHHFK+G CSC+G+W
Sbjct: 815 TAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850



 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 159/539 (29%), Positives = 257/539 (47%), Gaps = 98/539 (18%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  + + C ++ S+  G+  H++   +G  I +  +G+ LV M+  C  L + R+V
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGF-ISNVFVGNALVAMYSRCRSLSDARKV 184

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS-LGIAADSYTFSCVLK------- 206
           F+++    V  WN ++  Y+K G  K +L +F +M +  G   D+ T   VL        
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244

Query: 207 --------CLAV---------VGNSR--------RVKDAHKLFDELSDRDVVSWNCM--- 238
                   C AV         VGN           + +A+ +F  +S +DVVSWN M   
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304

Query: 239 --------------------------------ISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                                           ISGY   G+  + L V ++ML+ G   +
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN---------NTLLDMYSKCGD 317
             T+++VLSGCA+ GALM G+ +H +A+K  +  ++  N         N L+DMY+KC  
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIK--YPIDLRKNGHGDENMVINQLIDMYAKCKK 422

Query: 318 LDGAIRVFEKMG--ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVYAITS 373
           +D A  +F+ +   ER VV+WT MI GY++ G  + A+ L   M  E  +  P+ + I+ 
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQS-SLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
            L ACA    L IGK +H Y   N   +  L+VSN L+DMYAKCGS++DA  VF+ M  K
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542

Query: 433 DIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIH 481
           + V+W +++           AL +F  M +  F+ DGVT+  +L AC+    +++G E  
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602

Query: 482 GYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
             +    G+S        +VD+  + G L  A  L + +P +   + W   ++   +HG
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 133/296 (44%), Gaps = 49/296 (16%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVI------DDGVLGSKLVFMFVTCG 146
           K +  T  S+L  CA + +L  GK++H    +  I +      D+ ++ ++L+ M+  C 
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421

Query: 147 DLKEGRRVFNKIDNGK--VFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYTFS 202
            +   R +F+ +   +  V  W +++  YS+ G+  ++L L  +M  +      +++T S
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481

Query: 203 CVLKCLAVVGNSR---------------------------------RVKDAHKLFDELSD 229
           C L   A +   R                                  + DA  +FD +  
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           ++ V+W  +++GY  +G  E+ L +F EM  +GF +D  T++ VL  C++ G  M  + +
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSG--MIDQGM 599

Query: 290 HAF-ALKACF--SKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIA 341
             F  +K  F  S        L+D+  + G L+ A+R+ E+M  E   V W + ++
Sbjct: 600 EYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 4/145 (2%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK----TYCSILQLCADLKSLEDGKKVHS 120
            +   IG + + G+  KA+E+L    +    T+    T    L  CA L +L  GK++H+
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
               +        + + L+ M+  CG + + R VF+ +       W  LM  Y   G  +
Sbjct: 502 YALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGE 561

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVL 205
           E+L +F +M+ +G   D  T   VL
Sbjct: 562 EALGIFDEMRRIGFKLDGVTLLVVL 586


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 302/804 (37%), Positives = 457/804 (56%), Gaps = 46/804 (5%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSIICE 124
           N+ + + C  GNLE+A++ L S ++ KI  +  C  ++++LC + +   +G+ V   +  
Sbjct: 2   NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
           S + +    LG+ L+ MFV  GD+     VF ++    +F WN+L+  Y+K G F E+L 
Sbjct: 62  SLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALC 121

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK---------------------- 222
           L+ ++   GI  D YTF  VL+  A   +  R ++ H                       
Sbjct: 122 LYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYV 181

Query: 223 ----------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
                     LFD++  RD +SWN MISGY  N    +GLE+F  M  L  + DL TM +
Sbjct: 182 KCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTS 241

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           V+S C   G    G  +H++ ++  +   IS  N+L+ MY   G    A  VF  M  R 
Sbjct: 242 VISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRD 301

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           VVSWT++I+G     + D A+  ++ M   G  PD   I S+L ACA  G L++G  +H+
Sbjct: 302 VVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHE 361

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
             +       + V+N+L+DMY+KC  +  A  +F+Q+P KD++SW ++I           
Sbjct: 362 LAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFE 421

Query: 443 ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           AL  F  M+   +P+ VT+   L ACA + AL  G+EIH + L+ G+  D  + NAI+D+
Sbjct: 422 ALIFFRKMILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDL 481

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           YV+CG +  A + F++   KD+ +W I++ GY   G G   +  F  M ++ I PD+V+F
Sbjct: 482 YVRCGRMRTALNQFNL-NEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTF 540

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           IS+L ACS SG+V EG  +F  M+   +I P L+HYAC+VDLL R G L+EA+ FIE MP
Sbjct: 541 ISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMP 600

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + PD  IWG+LL  CRIH  V L E  A+H+F+ + ++ GYY+LL N+YA++ KW+EV K
Sbjct: 601 IKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAK 660

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R  +   GL  +PGCSW+E+KGKV+ F++G + HP  ++I  +L+    +MK  G F  
Sbjct: 661 VRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSG-FNG 719

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
              + ++  +  K    CGHSE+ A+A+ ++N   G  I VTKNL +C  CH   KF+SK
Sbjct: 720 QECSSMDGIQTSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISK 779

Query: 803 TARREIVLRDSNRFHHFKDGRCSC 826
             RREI +RD+ +FHHFKDG CSC
Sbjct: 780 IVRREISVRDTEQFHHFKDGLCSC 803



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 251/522 (48%), Gaps = 54/522 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++N  +G + + G  ++A+     +L++  +   D  T+ S+L+ CA    L  G++VH+
Sbjct: 102 SWNVLVGGYTKAGFFDEALCLYHRILWAGIRP--DVYTFPSVLRSCAGAMDLVRGREVHA 159

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            +      +D  V+ + L+ M+V CGD+   R +F+K+       WN ++  Y +     
Sbjct: 160 HVVRFDFDMDVDVVNA-LITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECL 218

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------------------------- 215
           E L LF +M+ L I  D  T + V+    ++G+ R                         
Sbjct: 219 EGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLI 278

Query: 216 -------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                    K+A  +F  +  RDVVSW  +ISG + N + +K LE +K M   G   D  
Sbjct: 279 QMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEV 338

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+ +VLS CA+ G L  G  +H  A +      +   N+L+DMYSKC  ++ A+ +F ++
Sbjct: 339 TIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQI 398

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            ++ V+SWTS+I G         A+  FR M+ +  +P+   + S L ACA  G L  GK
Sbjct: 399 PDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGK 457

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------- 441
           ++H +  +  M    ++ NA++D+Y +CG M  A + FN +  KD+ +WN ++       
Sbjct: 458 EIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKG 516

Query: 442 -GA--LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVA 496
            GA  ++LF  M+++   PD VT   +L AC+    +  G E    + + + I+ +    
Sbjct: 517 KGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHY 576

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
             +VD+  + G L  A    + +P K D   W  ++    +H
Sbjct: 577 ACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIH 618


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 318/817 (38%), Positives = 466/817 (57%), Gaps = 54/817 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI------DTKTYCSILQLCADLKSLEDGKKV 118
           ++NA IG     G   +A+ V  +   S+       D  T  S+L+ C        G +V
Sbjct: 126 SWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEV 185

Query: 119 HSIICESGIVIDDGVL-GSKLVFMFVTCGDLKEGRRVFNKIDNGK-VFIWNLLMHEYSKT 176
           H +  +SG+  D   L  + LV M+  CG L    RVF  + +G+ V  WN  +    + 
Sbjct: 186 HGLAVKSGL--DRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQN 243

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRR----------------- 216
           G F E+L LF++MQS G + +SYT   VL+    LA + + R                  
Sbjct: 244 GMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCN 303

Query: 217 -----------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                      V  A ++F E+ D+D +SWN M+S Y+ N +  + ++ F EM+  GFN 
Sbjct: 304 ALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNP 363

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D A +V++LS   + G L+ GR VHA+A+K     ++   NTL+DMY KC  ++ + RVF
Sbjct: 364 DHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVF 423

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++M  +  VSWT++IA YA+   +  AI  FR   +EGI+ D   + SIL AC+    + 
Sbjct: 424 DRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSIS 483

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
           + K VH Y   N +   L + N ++D+Y +CG +  A ++F  +  KDIV+W +M+    
Sbjct: 484 LLKQVHSYAIRNGLLD-LILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFA 542

Query: 443 -------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  A+ LF  ML    +PD V +  IL A A L++L +G+EIHG+++R     +  
Sbjct: 543 ENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGA 602

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V +++VDMY  CG +  A  +FD    KD++ WT MI   GMHG G  AI  F  M + G
Sbjct: 603 VVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETG 662

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           + PD VSF+++LYACSHS LVDEG  + +MM  +  ++P  EHYAC+VDLL R+G   EA
Sbjct: 663 VSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEA 722

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           Y+FI+ MP+ P + +W +LL  CRIH   +LA    + + ELEPDN G YVL++NV+AE 
Sbjct: 723 YKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEM 782

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            KW  VK++R K++ +GL+K+P CSWIEI   V+ F A   SH  ++ I   L  +  ++
Sbjct: 783 GKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKL 842

Query: 735 KREG-YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           +REG Y   T + L +  E EK   L  HSE+LA++FG+++  +G  +R+ KNLRVCGDC
Sbjct: 843 RREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDC 902

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           HE  K +SK   REIV+RD+NRFHHF  G CSC  FW
Sbjct: 903 HEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 194/656 (29%), Positives = 339/656 (51%), Gaps = 61/656 (9%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSE---KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           A + + C+ G+L +A+  L +     ++   T  Y  +L L A  +++ +G+++H+    
Sbjct: 24  ASLRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVA 83

Query: 125 SGIVIDD--GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
           +G + DD  G L +KL+FM+  CG L +  R+F+ +    VF WN L+     +G   E+
Sbjct: 84  TGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEA 143

Query: 183 LYLFKKMQS----LGIAADSYTFSCVLKCLAVVGNSRRVKDAH----------------- 221
           + +++ M++     G A D  T + VLK     G+ R   + H                 
Sbjct: 144 VGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANA 203

Query: 222 ---------------KLFDELSD-RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                          ++F+ + D RDV SWN  ISG + NG+  + L++F+ M + GF++
Sbjct: 204 LVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSM 263

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +  T V VL  CA    L  GR +HA  LK C ++     N LL MY++CG +D A+RVF
Sbjct: 264 NSYTTVGVLQVCAELAQLNHGRELHAALLK-CGTEFNIQCNALLVMYARCGWVDSALRVF 322

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
            ++G++  +SW SM++ Y +  ++  AI  F  MV+ G  PD   I S+L A    G L 
Sbjct: 323 REIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLI 382

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
            G++VH Y  +  + S L ++N LMDMY KC S+  +  VF++M +KD VSW T+I    
Sbjct: 383 NGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYA 442

Query: 443 -------ALDLF-VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  A+  F  A  +  + D + M  IL AC+ L ++   +++H Y +R+G+  D  
Sbjct: 443 QSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLI 501

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           + N I+D+Y +CG +  A ++F+M+  KD+++WT M+  +  +G   +A+A F  M  AG
Sbjct: 502 LKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAG 561

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           I+PD V+ + +L A +    + +G      ++R +  +E  +   + +VD+ S  G+++ 
Sbjct: 562 IQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV--VSSLVDMYSGCGSMNY 619

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL 667
           A +  +      D  +W +++    +H   K A  + + + E  + PD+  +  LL
Sbjct: 620 ALKVFDEAK-CKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALL 674


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 301/759 (39%), Positives = 442/759 (58%), Gaps = 45/759 (5%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
            K++H+++  SG  I    +  +LV ++ + GD+   R  F++I    V+ WN ++  Y 
Sbjct: 92  AKRLHALLVVSG-KIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYV 150

Query: 175 KTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSRR----------------- 216
           + G+F+E++  F ++  +    AD YTF  VLK    + + R+                 
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVA 210

Query: 217 ------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                       V  A  LFD++  RD+ SWN MISG I NG A + L+V  EM   G N
Sbjct: 211 ASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIN 270

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           +D  T+ ++L  CA  G +     +H + +K     E+  +N L++MY+K G+L  A +V
Sbjct: 271 MDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKV 330

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F++M  R VVSW S+IA Y +      A   F  M   G+EPD+  + S+    A     
Sbjct: 331 FQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDY 390

Query: 385 EIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           +  + VH +I +   +  ++ + NA+MDMYAK G +  A  VFN +PVKD+VSWNT+I  
Sbjct: 391 KNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISG 450

Query: 443 ---------ALDLFVAM--LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                    A++++  M   +  + +  T   IL A A + AL++G  IHG++++  +  
Sbjct: 451 YTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHL 510

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D  V   ++D+Y KCG LV A  LF  +P +  + W  +I+ +G+HG G  A+  F +M+
Sbjct: 511 DVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQ 570

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
             G++PD V+FIS+L ACSHSGLVDEG  FF++M+ E  I+P L+HY CMVDLL R G L
Sbjct: 571 DEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ-EYGIKPSLKHYGCMVDLLGRAGFL 629

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
             AY FI+ MP+ PDA+IWG+LL  CRIH  ++L +  ++ +FE++ +N GYYVLL+N+Y
Sbjct: 630 EMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIY 689

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           A   KWE V K+R     RGLKK PG S IE+  +V+IF  G  SHP  K+I + L+ L 
Sbjct: 690 ANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILT 749

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
            +MK  GY P   + L + +E EKE  L  HSE+LA+AFGI++ P    IR+ KNLRVCG
Sbjct: 750 AKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCG 809

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   KF+S+   REIV+RDS RFHHFK+G CSC  +W
Sbjct: 810 DCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 245/526 (46%), Gaps = 59/526 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            +N+ I  +   G+  +A++  Y      K + D  T+  +L+ C   ++L DG+K+H  
Sbjct: 141 TWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVDGRKIHCW 197

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           + + G   D  V  S L+ M+   G +   R +F+ +    +  WN ++    + GN  +
Sbjct: 198 VFKLGFQWDVFVAAS-LIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 256

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR-------------------------- 215
           +L +  +M+  GI  DS T + +L   A +G+                            
Sbjct: 257 ALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALIN 316

Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANG--VAEKGLEVFKEMLNLGFNVDL 267
                  + DA K+F ++  RDVVSWN +I+ Y  N   V  +G   FK  LN G   DL
Sbjct: 317 MYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGF-FFKMQLN-GLEPDL 374

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKE-ISFNNTLLDMYSKCGDLDGAIRVFE 326
            T+V++ S  A        R+VH F ++  +  E +   N ++DMY+K G +D A +VF 
Sbjct: 375 LTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFN 434

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM--VREGIEPDVYAITSILHACACDGLL 384
            +  + VVSW ++I+GY + G+   AI ++R M   RE I+ +     SIL A A  G L
Sbjct: 435 LIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECRE-IKLNQGTWVSILAAYAHVGAL 493

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
           + G  +H ++ + ++   ++V   L+D+Y KCG + DA  +F Q+P +  V WN +I   
Sbjct: 494 QQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCH 553

Query: 443 --------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                   AL LF  M  +  +PD VT   +L AC+    ++ G+     +  +GI    
Sbjct: 554 GIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSL 613

Query: 494 NVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMHG 538
                +VD+  + G L +A     DM    D   W  ++    +HG
Sbjct: 614 KHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHG 659



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 187/371 (50%), Gaps = 18/371 (4%)

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
           +C   +  + +HA  + +   +    +  L+++Y+  GD+  +   F+++  + V +W S
Sbjct: 85  SCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNS 144

Query: 339 MIAGYAREGVFDGAIRLF-RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           MI+ Y R G F  AI  F + ++    + D Y    +L AC     L  G+ +H ++ + 
Sbjct: 145 MISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQT---LVDGRKIHCWVFKL 201

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
             Q  ++V+ +L+ MY++ G +  A S+F+ MP +D+ SWN MI           ALD+ 
Sbjct: 202 GFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 261

Query: 448 VAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M L+    D VT+A ILP CA L  +     IH Y+++HG+  +  V+NA+++MY K 
Sbjct: 262 DEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKF 321

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G L  A+ +F  +  +D++SW  +IA Y  +     A   F  M+  G+EPD ++ +S+ 
Sbjct: 322 GNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLA 381

Query: 567 YACSHSGLVDEGWRFFN-MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
              + S            +MR    +E  +   A M D+ ++ G +  A++   ++PV  
Sbjct: 382 SIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVM-DMYAKLGVIDSAHKVFNLIPVK- 439

Query: 626 DATIWGSLLCG 636
           D   W +L+ G
Sbjct: 440 DVVSWNTLISG 450



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 158/320 (49%), Gaps = 20/320 (6%)

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
           + K +H  +  +    S ++S  L+++YA  G ++ +   F+Q+  KD+ +WN+MI    
Sbjct: 91  LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYV 150

Query: 443 -------ALDLFVAML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                  A+D F  +L    F+ D  T   +L AC +L     GR+IH ++ + G   D 
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLV---DGRKIHCWVFKLGFQWDV 207

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            VA +++ MY + G + +ARSLFD +P +D+ SW  MI+G   +G    A+   ++MR  
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 267

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           GI  D V+  S+L  C+  G +       ++   +  +E +L     ++++ ++ GNL +
Sbjct: 268 GINMDSVTVASILPVCAQLGDISTA-TLIHLYVIKHGLEFELFVSNALINMYAKFGNLGD 326

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK--VAEHVFELEPDNTGYYVLLANVY 671
           A +  + M +  D   W S++     + +   A        +  LEPD     V LA++ 
Sbjct: 327 AQKVFQQMFLR-DVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLT-LVSLASIA 384

Query: 672 AEAEKWEEVKKLREKISRRG 691
           A++  ++  + +   I RRG
Sbjct: 385 AQSRDYKNSRSVHGFIMRRG 404


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 296/791 (37%), Positives = 455/791 (57%), Gaps = 52/791 (6%)

Query: 87  YSSEKSKIDTKTY----CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
           + S+++ I    Y      +L+ C+ LK L   + +  +I ++G+   + +  +KLV +F
Sbjct: 24  FLSQRNYIPANVYEHPAALLLERCSSLKEL---RHILPLIFKNGLY-QEHLFQTKLVSLF 79

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
              G + E  RVF  ID     ++  ++  ++K  +  ++L  F +M+   +    Y F+
Sbjct: 80  CRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFT 139

Query: 203 CVLKC--------------------------LAVVG------NSRRVKDAHKLFDELSDR 230
            +LK                            A+ G        R+V +A K+FD + +R
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPER 199

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           D+VSWN +++GY  NG+A   LE+   M          T+V+VL   +    +  G+ +H
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIH 259

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
            +A++A F   ++    L+DMY+KCG L  A  +F+ M ER+VVSW SMI  Y +     
Sbjct: 260 GYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPK 319

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A+ +F+ M+ EG++P   ++   LHACA  G LE G+ +H    E ++  ++ V N+L+
Sbjct: 320 EAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLI 379

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGV 459
            MY KC  +  A S+F ++  + IVSWN MI           AL+ F  M  +  +PD  
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTF 439

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           T   ++ A A L+     + IHG ++R+ +  +  V  A+VDMY KCG +++AR +FDM+
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
             + + +W  MI GYG HG G  A+  F +M++  I P+ V+F+SV+ ACSHSGLV+ G 
Sbjct: 500 SERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGL 559

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
           + F+MM+   +IEP ++HY  MVDLL R G L+EA+ FI  MPV P   ++G++L  C+I
Sbjct: 560 KCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619

Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
           H  V  AEKVAE +FEL P++ GY+VLLAN+Y  A  WE+V ++R  + R+GL+K PGCS
Sbjct: 620 HKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679

Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
            +EIK +V+ F +G ++HP +KKI + L++L  ++K  GY P T   L   D++ KE  L
Sbjct: 680 MVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLILGLEDDV-KEQLL 738

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
             HSEKLA++FG+LN  AG TI V KNLRVC DCH   K++S    REI++RD  RFHHF
Sbjct: 739 SSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHF 798

Query: 820 KDGRCSCRGFW 830
           K+G CSC  +W
Sbjct: 799 KNGACSCGDYW 809



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 243/507 (47%), Gaps = 47/507 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSIIC 123
           Y   +  F +V +L+KA++        +++   Y    +L++C D   L  GK++H ++ 
Sbjct: 103 YYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +SG  +D   + + L  M+  C  + E R+VF+++    +  WN ++  YS+ G  + +L
Sbjct: 163 KSGFSLDLFAM-TGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVV----------GNSRR----------------- 216
            +   M    +     T   VL  ++ +          G + R                 
Sbjct: 222 EMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMY 281

Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                +K A  LFD + +R+VVSWN MI  Y+ N   ++ + +F++ML+ G      +++
Sbjct: 282 AKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVM 341

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
             L  CA+ G L  GR +H  +++    + +S  N+L+ MY KC ++D A  +F K+  R
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           ++VSW +MI G+A+ G    A+  F  M    ++PD +   S++ A A   +    K +H
Sbjct: 402 TIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIH 461

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---------- 441
             +  N +  +++V+ AL+DMYAKCG++  A  +F+ M  + + +WN MI          
Sbjct: 462 GVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGK 521

Query: 442 GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVANAI 499
            AL+LF  M +    P+GVT   ++ AC+    +E G +  H     + I    +   A+
Sbjct: 522 AALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAM 581

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLIS 526
           VD+  + G L  A      +P K  ++
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVN 608



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 189/416 (45%), Gaps = 39/416 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +  + + G    A+E+  L   E  K    T  S+L   + L+ +  GK++H   
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYA 262

Query: 123 CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             +G   D  V + + LV M+  CG LK  R +F+ +    V  WN ++  Y +  N KE
Sbjct: 263 MRAGF--DSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKE 320

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL------------------ 223
           ++ +F+KM   G+     +    L   A +G+  R +  HKL                  
Sbjct: 321 AMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLIS 380

Query: 224 --------------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                         F +L  R +VSWN MI G+  NG   + L  F +M       D  T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFT 440

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V+V++  A        + +H   ++ C  K +     L+DMY+KCG +  A  +F+ M 
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ER V +W +MI GY   G+   A+ LF  M +  I P+     S++ AC+  GL+E G  
Sbjct: 501 ERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLK 560

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
               +KEN  ++ S+    A++D+  + G + +A     QMPVK  V+ +  M+GA
Sbjct: 561 CFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 295/791 (37%), Positives = 457/791 (57%), Gaps = 52/791 (6%)

Query: 87  YSSEKSKIDTKTY----CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
           + SE++ I    Y      +L+ C+ LK L   +++  ++ ++G+   +    +KLV +F
Sbjct: 24  FLSERNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLY-QEHFFQTKLVSLF 79

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
              G + E  RVF  ID+    +++ ++  ++K  +  ++L  F +M+   +    Y F+
Sbjct: 80  CRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFT 139

Query: 203 CVLKC--------------------------LAVVG------NSRRVKDAHKLFDELSDR 230
            +LK                            A+ G        R+V +A K+FD + +R
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           D+VSWN +++GY  NG+A   LE+ K M          T+V+VL   +    +  G+ +H
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
            +A+++ F   ++ +  L+DMY+KCG L+ A ++F+ M ER+VVSW SMI  Y +     
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPK 319

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A+ +F+ M+ EG++P   ++   LHACA  G LE G+ +H    E  +  ++ V N+L+
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLI 379

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGV 459
            MY KC  +  A S+F ++  + +VSWN MI           AL+ F  M  +  +PD  
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           T   ++ A A L+     + IHG ++R  +  +  V  A+VDMY KCG +++AR +FDM+
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
             + + +W  MI GYG HGFG  A+  F +M++  I+P+ V+F+SV+ ACSHSGLV+ G 
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGL 559

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
           + F MM+   +IE  ++HY  MVDLL R G L+EA+ FI  MPV P   ++G++L  C+I
Sbjct: 560 KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619

Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
           H  V  AEK AE +FEL PD+ GY+VLLAN+Y  A  WE+V ++R  + R+GL+K PGCS
Sbjct: 620 HKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679

Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
            +EIK +V+ F +G ++HP +KKI + L++L   +K  GY P T   L   +++ KE  L
Sbjct: 680 MVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDV-KEQLL 738

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
             HSEKLA++FG+LN  AG TI V KNLRVC DCH   K++S    REIV+RD  RFHHF
Sbjct: 739 STHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHF 798

Query: 820 KDGRCSCRGFW 830
           K+G CSC  +W
Sbjct: 799 KNGACSCGDYW 809



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 192/416 (46%), Gaps = 39/416 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +  + + G    A+E++ S   E  K    T  S+L   + L+ +  GK++H   
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262

Query: 123 CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             SG   D  V + + LV M+  CG L+  R++F+ +    V  WN ++  Y +  N KE
Sbjct: 263 MRSGF--DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL------------------ 223
           ++ +F+KM   G+     +    L   A +G+  R +  HKL                  
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380

Query: 224 --------------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                         F +L  R +VSWN MI G+  NG     L  F +M +     D  T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V+V++  A        + +H   +++C  K +     L+DMY+KCG +  A  +F+ M 
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ER V +W +MI GY   G    A+ LF  M +  I+P+     S++ AC+  GL+E G  
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
               +KEN  ++ S+    A++D+  + G + +A     QMPVK  V+ +  M+GA
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 313/811 (38%), Positives = 467/811 (57%), Gaps = 48/811 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ I  F + G   KA+E      +SK+  D  T+ S+++ CA L   E G  V+  I 
Sbjct: 74  WNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQIL 133

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           E G    D  +G+ LV M+   G L   R+VF+++    +  WN L+  YS  G ++E+L
Sbjct: 134 EMGFE-SDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS----- 214
            ++ ++++  I  DS+T S VL   A                        VV N      
Sbjct: 193 EIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMY 252

Query: 215 ---RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
               R  DA ++FDE+  RD V++N MI GY+   + E+ +++F E L+  F  D+ T+ 
Sbjct: 253 LKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLD-QFKPDILTVT 311

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +VL  C +   L   + ++ + L+A F  E +  N L+D+Y+KCGD+  A  VF  M  +
Sbjct: 312 SVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECK 371

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             VSW S+I+GY + G    A++LF+ M+    + D      ++        L+ GK +H
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLH 431

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------- 443
               ++ +   L VSNAL+DMYAKCG + D+  +FN M   D V+WNT+I A        
Sbjct: 432 SNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFA 491

Query: 444 --LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             L +   M +N   PD  T    LP CASLAA   G+EIH  +LR G  ++  + NA++
Sbjct: 492 TGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 551

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           +MY KCG L  +  +F+ +  +D+++WT MI  YGM+G G  A+ +F DM ++GI PD V
Sbjct: 552 EMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSV 611

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
            FI+++YACSHSGLV++G   F  M+    I+P +EHYAC+VDLLSR+  +S+A  FI+ 
Sbjct: 612 VFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQA 671

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ PDA+IW S+L  CR   +++ AE+V+  + EL PD+ GY +L +N YA   KW++V
Sbjct: 672 MPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKV 731

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
             +R+ +  + +KKNPG SWIEI  KV++F +G  S P ++ I   L+ L   M +EGY 
Sbjct: 732 SLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYI 791

Query: 741 PKTRYALIN-ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
           P +R    N  +E EK   +CGHSE+LA+AFG+LN   G  ++V KNLRVC DCHE+ K 
Sbjct: 792 PDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTKL 851

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +SK   REI++RD+NRFH FKDG CSC+  W
Sbjct: 852 ISKIVGREILVRDANRFHLFKDGICSCKDRW 882



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 172/612 (28%), Positives = 295/612 (48%), Gaps = 61/612 (9%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK-VFIWNLL 169
           +L + +++H+++   G+   D   G KL+  +           VF ++   K V+IWN +
Sbjct: 19  NLNELRRIHALVISLGLDGSDFFSG-KLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSI 77

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------------------- 209
           +  +SK G F ++L  + K++   ++ D YTF  V+K  A                    
Sbjct: 78  IRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGF 137

Query: 210 ----VVGN------SRR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                VGN      SR   +  A ++FDE+  RD+VSWN +ISGY ++G  E+ LE++ E
Sbjct: 138 ESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           + N     D  T+ +VL   AN   +  G+ +H F LK+  +     NN LL MY K   
Sbjct: 198 LRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSR 257

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
              A RVF++M  R  V++ +MI GY +  + + ++++F   + +  +PD+  +TS+L A
Sbjct: 258 PTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ-FKPDILTVTSVLCA 316

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           C     L + K +++Y+          V N L+D+YAKCG M  A  VFN M  KD VSW
Sbjct: 317 CGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSW 376

Query: 438 NTMIG----------ALDLF-VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILR 486
           N++I           A+ LF + M+   + D +T   ++     LA L+ G+ +H   ++
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIK 436

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
            GI  D +V+NA++DMY KCG +  +  +F+ +   D ++W  +I+     G     +  
Sbjct: 437 SGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQV 496

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLL 605
              MR+  + PD  +F+  L  C+       G      ++R+    E +L+    ++++ 
Sbjct: 497 TTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF--GYESELQIGNALIEMY 554

Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE-----PDN 660
           S+ G L  ++R  E M    D   W  ++    ++ E    EK  E   ++E     PD+
Sbjct: 555 SKCGCLESSFRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALESFVDMEKSGIVPDS 610

Query: 661 TGYYVLLANVYA 672
               V +A +YA
Sbjct: 611 V---VFIALIYA 619



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 5/184 (2%)

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           V+ A I  A +S + L   R IH  ++  G+      +  ++D Y        + S+F  
Sbjct: 5   VSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRR 64

Query: 519 I-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD- 576
           + PAK++  W  +I  +  +G+   A+  +  +R++ + PD+ +F SV+ AC  +GL D 
Sbjct: 65  VSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDA 122

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           E          E   E  L     +VD+ SR G LS A +  + MPV  D   W SL+ G
Sbjct: 123 EMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVR-DLVSWNSLISG 181

Query: 637 CRIH 640
              H
Sbjct: 182 YSSH 185


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  557 bits (1435), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 298/801 (37%), Positives = 463/801 (57%), Gaps = 52/801 (6%)

Query: 73  FCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICES--GIV 128
            C  G LE+AM++L S ++ ++  D   + ++++LC   ++ E+G KV+S+   S   + 
Sbjct: 69  LCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLS 128

Query: 129 IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
           ++   LG+  + MFV  G+L +   VF K+    +F WN+L+  Y+K G F E++ L+ +
Sbjct: 129 VE---LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185

Query: 189 MQSLG-IAADSYTFSCVLKCLAVVGNSRR------------------------------- 216
           M  +G +  D YTF CVL+    + +  R                               
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 217 -VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
            VK A  LFD +  RD++SWN MISGY  NG+  +GL++F  M  L  + DL T+ +V+S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C   G    GR +HA+ +   F+ +IS  N+L  MY   G    A ++F +M  + +VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVS 365

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           WT+MI+GY    + + AI  +R M ++ ++PD   + ++L ACA  G L+ G ++H    
Sbjct: 366 WTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL--------- 446
           +  + S + V+N L++MY+KC  +  A  +F+ +P K+++SW ++I  L L         
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485

Query: 447 -FVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
            F  M    +P+ +T+   L ACA + AL  G+EIH ++LR G+  D  + NA++DMYV+
Sbjct: 486 FFRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVR 545

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           CG + +A + F+    KD+ SW I++ GY   G G   +  F+ M +A + PDE++FIS+
Sbjct: 546 CGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISL 604

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L  C  S +V +G  +F+ M  E  + P L+HYAC+VDLL R G L EA++FI+ MPV P
Sbjct: 605 LCGCGKSQMVRQGLMYFSKME-EYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTP 663

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
           D  +WG+LL  CRIHH + L E  A+ +FEL+  + GYY+LL N+YA+  KW EV K+R 
Sbjct: 664 DPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRR 723

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +   GL  + GCSW+E+KGKV+ F++    HP  K+I ++L     +M   G    +  
Sbjct: 724 MMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSES 783

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
           + ++  E+ ++   CGHSE+ A+AFG++N   G  I VTKNL +C  CH+  KF+SKT R
Sbjct: 784 SSMDETEISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCESCHDTVKFISKTVR 843

Query: 806 REIVLRDSNRFHHFKDGRCSC 826
           REI +RDS  FHHFKDG CSC
Sbjct: 844 REISVRDSEHFHHFKDGECSC 864



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 215/420 (51%), Gaps = 22/420 (5%)

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           + G  ANG  E+ +++   M  L   VD    V ++  C    A   G  V++ AL +  
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
           S  +   N  L M+ + G+L  A  VF KM ER++ SW  ++ GYA++G FD AI L+  
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185

Query: 359 MVR-EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
           M+   G++PDVY    +L  C     L  G++VH ++     +  + V NAL+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILP 466
            +  A  +F++MP +DI+SWN MI            L LF AM   + +PD +T+  ++ 
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
           AC  L     GR+IH Y++  G + D +V N++  MY+  G    A  LF  +  KD++S
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVS 365

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           WT MI+GY  +     AI T+  M Q  ++PDE++  +VL AC+  G +D G        
Sbjct: 366 WTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL----- 420

Query: 587 YECNIEPKLEHYAC----MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
           ++  I+ +L  Y      ++++ S+   + +A      +P   +   W S++ G R+++ 
Sbjct: 421 HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNR 479



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 242/521 (46%), Gaps = 52/521 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS----EKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++N  +G + + G  ++A+  LY         K D  T+  +L+ C  +  L  G++VH 
Sbjct: 162 SWNVLVGGYAKQGYFDEAI-CLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHV 220

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            +   G  +D  V+ + L+ M+V CGD+K  R +F+++    +  WN ++  Y + G   
Sbjct: 221 HVVRYGYELDIDVVNA-LITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGH 279

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------- 221
           E L LF  M+ L +  D  T + V+    ++G+ R  +D H                   
Sbjct: 280 EGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339

Query: 222 -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                        KLF  +  +D+VSW  MISGY  N + EK ++ ++ M       D  
Sbjct: 340 QMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEI 399

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+  VLS CA  G L  G  +H  A+KA     +   N L++MYSKC  +D A+ +F  +
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI 459

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             ++V+SWTS+IAG         A+  FR M +  ++P+   +T+ L ACA  G L  GK
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEALIFFRQM-KMTLQPNAITLTAALAACARIGALMCGK 518

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----- 443
           ++H ++    +    ++ NAL+DMY +CG M  A + FN    KD+ SWN ++       
Sbjct: 519 EIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQK-KDVSSWNILLTGYSERG 577

Query: 444 -----LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                ++LF  M++    PD +T   +L  C     + +G      +  +G++ +     
Sbjct: 578 QGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYA 637

Query: 498 AIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
            +VD+  + G L  A      +P   D   W  ++    +H
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIH 678


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  557 bits (1435), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 295/815 (36%), Positives = 468/815 (57%), Gaps = 52/815 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++NA +G F   G   +A+E LY   +     ID  T+ S+L+ C  L     G ++H +
Sbjct: 112 SWNALMGAFVSSGKYLEAIE-LYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGV 170

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI--DNGKVFIWNLLMHEYSKTGNF 179
             + G   +   + + L+ M+  CGDL   R +F+ I  +      WN ++  +   GN 
Sbjct: 171 AVKCGYG-EFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLK--------------------------------C 207
            E+L LF++MQ +G+A+++YTF   L+                                 
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANAL 289

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           +A+     R++DA ++F+ +  RD VSWN ++SG + N +    L  F++M N G   D 
Sbjct: 290 IAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQ 349

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            +++ +++     G L+ G+ VHA+A++      +   NTL+DMY+KC  +      FE 
Sbjct: 350 VSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFEC 409

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M E+ ++SWT++IAGYA+      AI LFR +  +G++ D   I S+L AC+        
Sbjct: 410 MHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFI 469

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
           +++H Y+ + D+ + + + NA++++Y + G +  A   F  +  KDIVSW +MI      
Sbjct: 470 REIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHN 528

Query: 443 -----ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL+LF ++ Q N +PD + +   L A A+L++L++G+EIHG+++R G   +  +A
Sbjct: 529 GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA 588

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           +++VDMY  CG +  +R +F  +  +DLI WT MI   GMHG G  AIA F  M    + 
Sbjct: 589 SSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVI 648

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           PD ++F+++LYACSHSGL+ EG RFF +M+Y   +EP  EHYACMVDLLSR+ +L EAY 
Sbjct: 649 PDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYH 708

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
           F+  MP+ P + IW +LL  C IH   +L E  A+ + + + +N+G Y L++N++A   +
Sbjct: 709 FVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGR 768

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL-RLEMK 735
           W +V+++R ++   GLKKNPGCSWIE+  K++ F+A   SHP    I   L +  +L  K
Sbjct: 769 WNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEK 828

Query: 736 REGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHE 795
           + GY  +T++   N  E EK   L GHSE+LA+ +G+L  P G  IR+TKNLR+C DCH 
Sbjct: 829 KGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHT 888

Query: 796 MAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             K  S+ ++R +V+RD+NRFHHF+ G CSC  FW
Sbjct: 889 FFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923



 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 179/636 (28%), Positives = 316/636 (49%), Gaps = 64/636 (10%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L LC   K+L  G+++H+++ +S +      L +KLV M+  CG L++  +VF+++   
Sbjct: 52  LLDLCVAAKALPQGQQLHALLLKSHL---SAFLATKLVLMYGKCGSLRDAVKVFDEMSER 108

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
            +F WN LM  +  +G + E++ L+K M+ LG+A D+ TF  VLK    +G SR   + H
Sbjct: 109 TIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168

Query: 222 K--------------------------------LFDE--LSDRDVVSWNCMISGYIANGV 247
                                            LFD   +   D VSWN +IS ++A G 
Sbjct: 169 GVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGN 228

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
             + L +F+ M  +G   +  T V  L G  +   +  G  +H   LK+    ++   N 
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANA 288

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L+ MY+KCG ++ A RVFE M  R  VSW ++++G  +  ++  A+  FR M   G +PD
Sbjct: 289 LIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPD 348

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
             ++ +++ A    G L  GK+VH Y   N + S++ + N L+DMYAKC  +      F 
Sbjct: 349 QVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFE 408

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALER 476
            M  KD++SW T+I           A++LF  + ++  + D + +  +L AC+ L +   
Sbjct: 409 CMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNF 468

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
            REIHGY+ +  + AD  + NAIV++Y + G +  AR  F+ I +KD++SWT MI     
Sbjct: 469 IREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVH 527

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPKL 595
           +G   +A+  F  ++Q  I+PD ++ IS L A ++   + +G      ++R    +E  +
Sbjct: 528 NGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPI 587

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH----HEVKLAEKVAE 651
              + +VD+ +  G +  + +    +    D  +W S++    +H      + L +K+ +
Sbjct: 588 A--SSLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMHGCGNKAIALFKKMTD 644

Query: 652 HVFELEPDNTGYYVLL-----ANVYAEAEKWEEVKK 682
               + PD+  +  LL     + +  E +++ E+ K
Sbjct: 645 Q--NVIPDHITFLALLYACSHSGLMVEGKRFFEIMK 678



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 213/461 (46%), Gaps = 47/461 (10%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
           T ++N+ I      GN  +A+ +    ++  +  +T T+ + LQ   D   ++ G  +H 
Sbjct: 213 TVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHG 272

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            + +S    D  V  + L+ M+  CG +++  RVF  +       WN L+    +   + 
Sbjct: 273 AVLKSNHFADVYV-ANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYS 331

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL----------------- 223
           ++L  F+ MQ+ G   D  +   ++      GN  + K+ H                   
Sbjct: 332 DALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLV 391

Query: 224 ---------------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                          F+ + ++D++SW  +I+GY  N    + + +F+++   G +VD  
Sbjct: 392 DMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPM 451

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            + +VL  C+   +  F R +H +  K   + +I   N ++++Y + G +D A R FE +
Sbjct: 452 MIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESI 510

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             + +VSWTSMI      G+   A+ LF  + +  I+PD  AI S L A A    L+ GK
Sbjct: 511 RSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGK 570

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
           ++H ++          ++++L+DMYA CG++ ++  +F+ +  +D++ W +MI       
Sbjct: 571 EIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHG 630

Query: 443 ----ALDLFVAML-QNFEPDGVTMACILPACASLAALERGR 478
               A+ LF  M  QN  PD +T   +L AC+    +  G+
Sbjct: 631 CGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGK 671



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 136/287 (47%), Gaps = 29/287 (10%)

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           +A + +L  C     L  G+ +H  + ++ +  S +++  L+ MY KCGS+ DA  VF++
Sbjct: 47  HAHSLLLDLCVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDE 104

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERG 477
           M  + I SWN ++G          A++L+  M +     D  T   +L AC +L     G
Sbjct: 105 MSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLG 164

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD--MIPAKDLISWTIMIAGYG 535
            EIHG  ++ G      V NA++ MY KCG L  AR LFD  M+  +D +SW  +I+ + 
Sbjct: 165 AEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
             G   +A++ F  M++ G+  +  +F++ L        V  G      +        K 
Sbjct: 225 AEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVL-------KS 277

Query: 596 EHYA------CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            H+A       ++ + ++ G + +A R  E M +  D   W +LL G
Sbjct: 278 NHFADVYVANALIAMYAKCGRMEDAGRVFESM-LCRDYVSWNTLLSG 323


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 283/737 (38%), Positives = 420/737 (56%), Gaps = 44/737 (5%)

Query: 138  LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-------- 189
            L+ ++  CGD+   RRVF+++ +     W  +M  Y+  G F E L LF KM        
Sbjct: 269  LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328

Query: 190  ------------QSLGIAADSYTFSCVLK------------CLAVVGNSRRVKDAHKLFD 225
                        +++ +        C L+             + +       + A +LF 
Sbjct: 329  KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388

Query: 226  ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
             L  RD+V+W+ +I+  +  G  E+ L +F+EM N     +  T++++L  CA+   L  
Sbjct: 389  GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448

Query: 286  GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
            G+++H F +KA    ++S    L+ MY+KCG    A+  F +M  R +V+W S+I GYA+
Sbjct: 449  GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508

Query: 346  EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
             G    AI +F  +    I PD   +  ++ ACA    L+ G  +H  I +   +S  +V
Sbjct: 509  IGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHV 568

Query: 406  SNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTMIGA----------LDLFVAM-LQN 453
             NAL+DMYAKCGS+  AE +FN+    KD V+WN +I A          +  F  M L+N
Sbjct: 569  KNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN 628

Query: 454  FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
            F P+ VT   +LPA A LAA   G   H  I++ G  ++  V N+++DMY KCG L  + 
Sbjct: 629  FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSE 688

Query: 514  SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
             LF+ +  KD +SW  M++GY +HG G  AIA F+ M+++ ++ D VSF+SVL AC H G
Sbjct: 689  KLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXG 748

Query: 574  LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
            LV+EG + F+ M  + +I+P LEHYACMVDLL R G   E   FI++MPV PDA +WG+L
Sbjct: 749  LVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGAL 808

Query: 634  LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
            L  CR+H  VKL E   +H+ +LEP N  ++V+L+++YA++ +W +  K R K++  GLK
Sbjct: 809  LGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLK 868

Query: 694  KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
            K PGCSW+E+K KV+ F  G  SHP  + +  L   L  +M++ GY P     L N +E 
Sbjct: 869  KTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEE 928

Query: 754  EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
            +KE+ L  HSE+LA+ F +LN P G TI++ KNLRVC DCH   KF+SK   R I++RD+
Sbjct: 929  DKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDA 988

Query: 814  NRFHHFKDGRCSCRGFW 830
             RFHHF+DG CSC  +W
Sbjct: 989  TRFHHFEDGICSCNDYW 1005



 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 199/665 (29%), Positives = 329/665 (49%), Gaps = 67/665 (10%)

Query: 36  IIVSS-KSHSSCT--INPIS----ASISKTLVCKTKN-----YNAEIGRFCEVGNLEKAM 83
           IIVS  K H S T  IN  S      +++++   T N     +N+ I  +       +A+
Sbjct: 55  IIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEAL 114

Query: 84  EVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM 141
           E+ Y   +  +  D  T+  +L+ C    +L++G   H  I   G+   D  +G+ LV M
Sbjct: 115 EMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLE-RDVFIGAGLVDM 173

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT- 200
           +   GDLK  R VF+K+    V  WN ++   S++ +  E++  F+ MQ +G+   S + 
Sbjct: 174 YSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSL 233

Query: 201 ---------FSCVLKCLAVVGNSRR--------------------VKDAHKLFDELSDRD 231
                     S +  C ++ G   R                    V  A ++FD++ D+D
Sbjct: 234 LNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQD 293

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
            VSW  M++GY  NG   + LE+F +M      ++  + V+     A    L  G+ +H 
Sbjct: 294 DVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHG 353

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
            AL+     +I     L+ MY+KCG+ + A ++F  +  R +V+W+++IA   + G  + 
Sbjct: 354 CALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEE 413

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           A+ LF+ M  + ++P+   + SIL ACA   LL++GK +H +  + DM S L    AL+ 
Sbjct: 414 ALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVS 473

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVT 460
           MYAKCG    A + FN+M  +DIV+WN++I           A+D+F  + L    PD  T
Sbjct: 474 MYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGT 533

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           M  ++PACA L  L++G  IHG I++ G  +D +V NA++DMY KCG L  A  LF+   
Sbjct: 534 MVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTD 593

Query: 521 -AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
             KD ++W ++IA Y  +G   +AI++F+ MR     P+ V+F+SVL A ++     EG 
Sbjct: 594 FTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGM 653

Query: 580 RFFNMMRYECNIEPKLEHYA----CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
            F     + C I+            ++D+ ++ G L  + +    M    D   W ++L 
Sbjct: 654 AF-----HACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMD-HKDTVSWNAMLS 707

Query: 636 GCRIH 640
           G  +H
Sbjct: 708 GYAVH 712



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 167/317 (52%), Gaps = 17/317 (5%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +LS C +   L+    +HA  + + F    S  + L+++YS     D A  VF+     S
Sbjct: 38  LLSSCKHLNPLL---QIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPS 93

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
            + W SMI  Y R   ++ A+ ++  MV +G+EPD Y  T +L AC     L+ G   H 
Sbjct: 94  RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHG 153

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
            I    ++  +++   L+DMY+K G +  A  VF++MP +D+V+WN MI           
Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCE 213

Query: 443 ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           A+D F +M L   EP  V++  + P    L+ +E  R IHGY+ R   S+   V+N ++D
Sbjct: 214 AVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLID 271

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           +Y KCG + +AR +FD +  +D +SW  M+AGY  +G   + +  F+ M+   +  ++VS
Sbjct: 272 LYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVS 331

Query: 562 FISVLYACSHSGLVDEG 578
            +S   A + +  +++G
Sbjct: 332 AVSAFLAAAETIDLEKG 348


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 283/737 (38%), Positives = 421/737 (57%), Gaps = 44/737 (5%)

Query: 138  LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-------- 189
            L+ ++  CGD+   RRVF+++ +     W  +M  Y+  G F E L LF KM        
Sbjct: 269  LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328

Query: 190  ------------QSLGIAADSYTFSCVLK------------CLAVVGNSRRVKDAHKLFD 225
                        +++ +        C L+             + +       + A +LF 
Sbjct: 329  KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388

Query: 226  ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
             L  RD+V+W+ +I+  +  G  E+ L +F+EM N     +  T++++L  CA+   L  
Sbjct: 389  GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448

Query: 286  GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
            G+++H F +KA    ++S    L+ MY+KCG    A+  F +M  R +V+W S+I GYA+
Sbjct: 449  GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508

Query: 346  EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
             G    AI +F  +    I PD   +  ++ ACA    L+ G  +H  I +   +S  +V
Sbjct: 509  IGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHV 568

Query: 406  SNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTMIGA----------LDLFVAM-LQN 453
             NAL+DMYAKCGS+  AE +FN+    KD V+WN +I A          +  F  M L+N
Sbjct: 569  KNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN 628

Query: 454  FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
            F P+ VT   +LPA A LAA   G   H  I++ G  ++  V N+++DMY KCG L  + 
Sbjct: 629  FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSE 688

Query: 514  SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
             LF+ +  KD +SW  M++GY +HG G  AIA F+ M+++ ++ D VSF+SVL AC H+G
Sbjct: 689  KLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAG 748

Query: 574  LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
            LV+EG + F+ M  + +I+P LEHYACMVDLL R G   E   FI++MPV PDA +WG+L
Sbjct: 749  LVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGAL 808

Query: 634  LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
            L  CR+H  VKL E   +H+ +LEP N  ++V+L+++YA++ +W +  K R K++  GLK
Sbjct: 809  LGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLK 868

Query: 694  KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
            K PGCSW+E+K KV+ F  G  SHP  + +  L   L  +M++ GY P     L N +E 
Sbjct: 869  KTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEE 928

Query: 754  EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
            +KE+ L  HSE+LA+ F +LN P G TI++ KNLRVC DCH   KF+SK   R I++RD+
Sbjct: 929  DKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDA 988

Query: 814  NRFHHFKDGRCSCRGFW 830
             RFHHF+DG CSC  +W
Sbjct: 989  TRFHHFEDGICSCNDYW 1005



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 199/665 (29%), Positives = 329/665 (49%), Gaps = 67/665 (10%)

Query: 36  IIVSS-KSHSSCT--INPIS----ASISKTLVCKTKN-----YNAEIGRFCEVGNLEKAM 83
           IIVS  K H S T  IN  S      +++++   T N     +N+ I  +       +A+
Sbjct: 55  IIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEAL 114

Query: 84  EVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM 141
           E+ Y   +  +  D  T+  +L+ C    +L++G   H  I   G+   D  +G+ LV M
Sbjct: 115 EMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLE-RDVFIGAGLVDM 173

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT- 200
           +   GDLK  R VF+K+    V  WN ++   S++ +  E++  F+ MQ +G+   S + 
Sbjct: 174 YSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSL 233

Query: 201 ---------FSCVLKCLAVVGNSRR--------------------VKDAHKLFDELSDRD 231
                     S +  C ++ G   R                    V  A ++FD++ D+D
Sbjct: 234 LNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQD 293

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
            VSW  M++GY  NG   + LE+F +M      ++  + V+     A    L  G+ +H 
Sbjct: 294 DVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHG 353

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
            AL+     +I     L+ MY+KCG+ + A ++F  +  R +V+W+++IA   + G  + 
Sbjct: 354 CALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEE 413

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           A+ LF+ M  + ++P+   + SIL ACA   LL++GK +H +  + DM S L    AL+ 
Sbjct: 414 ALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVS 473

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVT 460
           MYAKCG    A + FN+M  +DIV+WN++I           A+D+F  + L    PD  T
Sbjct: 474 MYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGT 533

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           M  ++PACA L  L++G  IHG I++ G  +D +V NA++DMY KCG L  A  LF+   
Sbjct: 534 MVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTD 593

Query: 521 -AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
             KD ++W ++IA Y  +G   +AI++F+ MR     P+ V+F+SVL A ++     EG 
Sbjct: 594 FTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGM 653

Query: 580 RFFNMMRYECNIEPKLEHYA----CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
            F     + C I+            ++D+ ++ G L  + +    M    D   W ++L 
Sbjct: 654 AF-----HACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMD-HKDTVSWNAMLS 707

Query: 636 GCRIH 640
           G  +H
Sbjct: 708 GYAVH 712



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 167/317 (52%), Gaps = 17/317 (5%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +LS C +   L+    +HA  + + F    S  + L+++YS     D A  VF+     S
Sbjct: 38  LLSSCKHLNPLL---QIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPS 93

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
            + W SMI  Y R   ++ A+ ++  MV +G+EPD Y  T +L AC     L+ G   H 
Sbjct: 94  RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHG 153

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
            I    ++  +++   L+DMY+K G +  A  VF++MP +D+V+WN MI           
Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCE 213

Query: 443 ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           A+D F +M L   EP  V++  + P    L+ +E  R IHGY+ R   S+   V+N ++D
Sbjct: 214 AVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLID 271

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           +Y KCG + +AR +FD +  +D +SW  M+AGY  +G   + +  F+ M+   +  ++VS
Sbjct: 272 LYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVS 331

Query: 562 FISVLYACSHSGLVDEG 578
            +S   A + +  +++G
Sbjct: 332 AVSAFLAAAETIDLEKG 348


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 314/811 (38%), Positives = 462/811 (56%), Gaps = 48/811 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ I  F + G   +A+E      +SK+  D  T+ S+++ CA L   E G  V+  I 
Sbjct: 74  WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G    D  +G+ LV M+   G L   R+VF+++    +  WN L+  YS  G ++E+L
Sbjct: 134 DMGFE-SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192

Query: 184 YLFKKMQSLGIAADSYTFSCVLKC---LAVVGNS-------------------------- 214
            ++ ++++  I  DS+T S VL     L VV                             
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252

Query: 215 ---RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
              RR  DA ++FDE+  RD VS+N MI GY+   + E+ + +F E L+  F  DL T+ 
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVS 311

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +VL  C +   L   + ++ + LKA F  E +  N L+D+Y+KCGD+  A  VF  M  +
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             VSW S+I+GY + G    A++LF+ M+    + D      ++        L+ GK +H
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 431

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA---LDLFV 448
               ++ +   L VSNAL+DMYAKCG + D+  +F+ M   D V+WNT+I A      F 
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491

Query: 449 AMLQ--------NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             LQ           PD  T    LP CASLAA   G+EIH  +LR G  ++  + NA++
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 551

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           +MY KCG L  +  +F+ +  +D+++WT MI  YGM+G G  A+ TF DM ++GI PD V
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
            FI+++YACSHSGLVDEG   F  M+    I+P +EHYAC+VDLLSR+  +S+A  FI+ 
Sbjct: 612 VFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQA 671

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ PDA+IW S+L  CR   +++ AE+V+  + EL PD+ GY +L +N YA   KW++V
Sbjct: 672 MPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKV 731

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
             +R+ +  + + KNPG SWIE+   V++F +G  S P ++ I   L+ L   M +EGY 
Sbjct: 732 SLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYI 791

Query: 741 PKTRYALIN-ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
           P  R    N  +E EK   +CGHSE+LA+AFG+LN   G  ++V KNLRVCGDCHE+ K 
Sbjct: 792 PDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKL 851

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +SK   REI++RD+NRFH FKDG CSC+  W
Sbjct: 852 ISKIVGREILVRDANRFHLFKDGTCSCKDRW 882



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 172/612 (28%), Positives = 297/612 (48%), Gaps = 61/612 (9%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK-VFIWNLL 169
           +L + +++H+++   G+   D   G KL+  +    +      VF ++   K V++WN +
Sbjct: 19  NLNELRRIHALVISLGLDSSDFFSG-KLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSI 77

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------------------- 209
           +  +SK G F E+L  + K++   ++ D YTF  V+K  A                    
Sbjct: 78  IRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGF 137

Query: 210 ----VVGN------SRR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                VGN      SR   +  A ++FDE+  RD+VSWN +ISGY ++G  E+ LE++ E
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           + N     D  T+ +VL    N   +  G+ +H FALK+  +  +  NN L+ MY K   
Sbjct: 198 LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRR 257

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
              A RVF++M  R  VS+ +MI GY +  + + ++R+F   + +  +PD+  ++S+L A
Sbjct: 258 PTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRA 316

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           C     L + K +++Y+ +        V N L+D+YAKCG M  A  VFN M  KD VSW
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376

Query: 438 NTMIG----------ALDLF-VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILR 486
           N++I           A+ LF + M+   + D +T   ++     LA L+ G+ +H   ++
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK 436

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
            GI  D +V+NA++DMY KCG +  +  +F  +   D ++W  +I+     G     +  
Sbjct: 437 SGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQV 496

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLL 605
              MR++ + PD  +F+  L  C+       G      ++R+    E +L+    ++++ 
Sbjct: 497 TTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF--GYESELQIGNALIEMY 554

Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE-----PDN 660
           S+ G L  + R  E M    D   W  ++    ++ E    EK  E   ++E     PD+
Sbjct: 555 SKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDS 610

Query: 661 TGYYVLLANVYA 672
               V +A +YA
Sbjct: 611 V---VFIAIIYA 619



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 248/507 (48%), Gaps = 18/507 (3%)

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-RDV 232
           S + N  E   +   + SLG+ +  + FS   K +    + R    +  +F  +S  ++V
Sbjct: 15  SSSSNLNELRRIHALVISLGLDSSDF-FSG--KLIDKYSHFREPASSLSVFRRVSPAKNV 71

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
             WN +I  +  NG+  + LE + ++     + D  T  +V+  CA       G  V+  
Sbjct: 72  YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
            L   F  ++   N L+DMYS+ G L  A +VF++M  R +VSW S+I+GY+  G ++ A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
           + ++  +    I PD + ++S+L A     +++ G+ +H +  ++ + S + V+N L+ M
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMI-GALDL---------FVAMLQNFEPDGVTMA 462
           Y K     DA  VF++M V+D VS+NTMI G L L         F+  L  F+PD +T++
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVS 311

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            +L AC  L  L   + I+ Y+L+ G   +  V N ++D+Y KCG ++ AR +F+ +  K
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           D +SW  +I+GY   G   +A+  F  M     + D ++++ ++   +    +  G +  
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGL 430

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
           +    +  I   L     ++D+ ++ G + ++ +    M    D   W +++  C    +
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGD 489

Query: 643 VKLAEKVAEHV--FELEPDNTGYYVLL 667
                +V   +   E+ PD   + V L
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTL 516



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 15/198 (7%)

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           V+   I  A +S + L   R IH  ++  G+ +    +  ++D Y        + S+F  
Sbjct: 5   VSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRR 64

Query: 519 I-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD- 576
           + PAK++  W  +I  +  +G   +A+  +  +R++ + PD+ +F SV+ AC  +GL D 
Sbjct: 65  VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDA 122

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           E          +   E  L     +VD+ SR G L+ A +  + MPV  D   W SL+ G
Sbjct: 123 EMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISG 181

Query: 637 ----------CRIHHEVK 644
                       I+HE+K
Sbjct: 182 YSSHGYYEEALEIYHELK 199


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 315/816 (38%), Positives = 448/816 (54%), Gaps = 99/816 (12%)

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG---RRVFNKIDNGKVFIW 166
           K++   K +H  +   GI+  +  L S L+  +++ G L       R F   D G V+ W
Sbjct: 39  KTISQVKLIHQKLLSFGILTLN--LTSHLISTYISLGCLSHAVSLLRRFPPSDAG-VYHW 95

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR----------- 215
           N L+  Y   G   + L  F  M SL    D+YTF  V K    + + R           
Sbjct: 96  NSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRV 155

Query: 216 ---------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                                 + DA K+FDE+   DVVSWN +I  Y   G  +  LE+
Sbjct: 156 TGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEM 215

Query: 255 FKEMLN-LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           F +M N  GF  D  T+V VL  CA+ G    G+  H FA+ +   + +   N L+DMY+
Sbjct: 216 FSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYA 275

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF----------------- 356
           K G +D A  VF  M  + VVSW +M+AGY++ G F+ A+RLF                 
Sbjct: 276 KFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSA 335

Query: 357 ------------------RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY----- 393
                             R M+  GI+P+   + S+L  CA  G L  GK++H Y     
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395

Query: 394 --IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK--DIVSWNTMIG------- 442
             +++N       V N L+DMYAKC  +  A ++F+ +  K  D+V+W  MIG       
Sbjct: 396 MDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455

Query: 443 ---ALDLFVAMLQ---NFEPDGVTMACILPACASLAALERGREIHGYILRHGISA-DRNV 495
              AL+L   M +      P+  T++C L ACASLAAL  G++IH Y LR+  +A    V
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFV 515

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
           +N ++DMY KCG +  AR +FD +  K+ ++WT ++ GYGMHG+G +A+  F +MR+ G 
Sbjct: 516 SNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGF 575

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           + D V+ + VLYACSHSG++D+G  +FN M+ +  + P  EHYAC+VDLL R G L+ A 
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAAL 635

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
           R IE MP+ P   +W +LL  CRIH +V+L E  A+ + EL  +N G Y LL+N+YA A 
Sbjct: 636 RLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAG 695

Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIE-IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
           +W++V ++R  +  +G+KK PGCSW+E IKG    FV G  +HPHAK+I  +L      +
Sbjct: 696 RWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFV-GDKTHPHAKEIYQVLSDHMQRI 754

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           K  GY P+T +AL + D+ EK+  L  HSEKLA+A+GIL  P G  IR+TKNLRVCGDCH
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               +MS+    EI+LRDS+RFHHFK+G CSC+G+W
Sbjct: 815 TAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 249/504 (49%), Gaps = 67/504 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N+ I  + ++G  + A+E+          + D  T  ++L  CA + +   GK+ H  
Sbjct: 195 SWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGF 254

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
              S + I +  +G+ LV M+   G + E   VF+ +    V  WN ++  YS+ G F++
Sbjct: 255 AVTSEM-IQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFED 313

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
           ++ LF++MQ                                  +E    DVV+W+  ISG
Sbjct: 314 AVRLFEQMQ----------------------------------EEKIKMDVVTWSAAISG 339

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y   G+  + L V ++ML+ G   +  T+++VLSGCA+ GALM G+ +H +A+K  +  +
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--YPMD 397

Query: 302 ISFN---------NTLLDMYSKCGDLDGAIRVFEKMG--ERSVVSWTSMIAGYAREGVFD 350
           +  N         N L+DMY+KC  +D A  +F+ +   ER VV+WT MI GY++ G  +
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457

Query: 351 GAIRLFRGMVREGIE--PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS-SLYVSN 407
            A+ L   M  E  +  P+ + I+  L ACA    L IGK +H Y   N   +  L+VSN
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSN 517

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEP 456
            L+DMYAKCG + DA  VF+ M  K+ V+W +++           AL +F  M +  F+ 
Sbjct: 518 CLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKL 577

Query: 457 DGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           DGVT+  +L AC+    +++G E    +    G+S        +VD+  + G L  A  L
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRL 637

Query: 516 FDMIPAK-DLISWTIMIAGYGMHG 538
            + +P +   + W  +++   +HG
Sbjct: 638 IEEMPMEPPPVVWVALLSCCRIHG 661


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 306/813 (37%), Positives = 444/813 (54%), Gaps = 49/813 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++   IG     G  ++A       ++     ++ TY SIL   A   +LE  K+VHS  
Sbjct: 98  SWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHA 157

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +G+ +D  V G+ LV M+   G + + R VF+ +    +F W +++   ++ G  +E+
Sbjct: 158 VNAGLALDLRV-GNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEA 216

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAV--------------------------VGNS-- 214
             LF +M+  G   +  T+  +L   A+                          VGN+  
Sbjct: 217 FSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALI 276

Query: 215 ------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   + DA  +FD + DRDV+SWN MI G   NG   +   +F +M   GF  D  
Sbjct: 277 HMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDST 336

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T +++L+   + GA  + + VH  A++     ++   +  + MY +CG +D A  +F+K+
Sbjct: 337 TYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKL 396

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             R+V +W +MI G A++     A+ LF  M REG  PD     +IL A   +  LE  K
Sbjct: 397 AVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVK 456

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
           +VH Y  +  +   L V NAL+ MYAKCG+   A+ VF+ M  +++ +W  MI       
Sbjct: 457 EVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHG 515

Query: 443 ----ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
               A  LF+ ML +   PD  T   IL ACAS  ALE  +E+H + +  G+ +D  V N
Sbjct: 516 CGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGN 575

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           A+V MY KCG +  AR +FD +  +D+ SWT+MI G   HG G DA+  F  M+  G +P
Sbjct: 576 ALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKP 635

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           +  SF++VL ACSH+GLVDEG R F  +  +  IEP +EHY CMVDLL R G L EA  F
Sbjct: 636 NGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHF 695

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           I  MP+ P    WG+LL  C  +  +++AE  A+   +L+P +   YVLL+N+YA    W
Sbjct: 696 ILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNW 755

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
           E+   +R  + RRG++K PG SWIE+  +++ FV G +SHP +K+I + LK L   +K E
Sbjct: 756 EQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAE 815

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           GY P TR  L N D+  KE ALC HSEKLA+ +G+++ P    IRV KNLRVC DCH   
Sbjct: 816 GYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTAT 875

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KF+SK   REIV RD+ RFHHFKDG CSC  +W
Sbjct: 876 KFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908



 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 196/620 (31%), Positives = 314/620 (50%), Gaps = 55/620 (8%)

Query: 70  IGRFCEVGNLEKAMEVLYSS---EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           IG + E G  E AM+V YS    E  + +  TY SIL+ C    SL+ GKK+H+ I +SG
Sbjct: 2   IGGYAEYGYAEDAMKV-YSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
              D  V  + LV M+V CG + + + +F+K+    V  W +++   +  G  +E+ + F
Sbjct: 61  FQSDVRV-ETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119

Query: 187 KKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK------------------------ 222
            +MQ  G   +SYT+  +L   A  G    VK+ H                         
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179

Query: 223 --------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                   +FD + +RD+ SW  MI G   +G  ++   +F +M   G   +L T +++L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239

Query: 275 SGCA--NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +  A  + GAL + + VH  A KA F  ++   N L+ MY+KCG +D A  VF+ M +R 
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           V+SW +MI G A+ G    A  +F  M +EG  PD     S+L+     G  E  K+VH 
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK 359

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           +  E  + S L V +A + MY +CGS+ DA+ +F+++ V+++ +WN MIG          
Sbjct: 360 HAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGRE 419

Query: 443 ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           AL LF+ M  + F PD  T   IL A     ALE  +E+H Y +  G+  D  V NA+V 
Sbjct: 420 ALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVH 478

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KCG  + A+ +FD +  +++ +WT+MI+G   HG G +A + F  M + GI PD  +
Sbjct: 479 MYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATT 538

Query: 562 FISVLYACSHSGLVDEGW-RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           ++S+L AC+ +G ++  W +  +       +   L     +V + ++ G++ +A R  + 
Sbjct: 539 YVSILSACASTGALE--WVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDD 596

Query: 621 MPVAPDATIWGSLLCGCRIH 640
           M +  D   W  ++ G   H
Sbjct: 597 M-LERDVYSWTVMIGGLAQH 615



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 172/576 (29%), Positives = 282/576 (48%), Gaps = 72/576 (12%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + DA  +FD++ +R+V+SW  MI G    G  ++    F +M   GF  +  T V++L+ 
Sbjct: 81  IDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNA 140

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
            A+ GAL + + VH+ A+ A  + ++   N L+ MY+K G +D A  VF+ M ER + SW
Sbjct: 141 NASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSW 200

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA--CDGLLEIGKDVHDYI 394
           T MI G A+ G    A  LF  M R G  P++    SIL+A A    G LE  K+VH + 
Sbjct: 201 TVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHA 260

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
            +    S L V NAL+ MYAKCGS+ DA  VF+ M  +D++SWN MIG          A 
Sbjct: 261 GKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAF 320

Query: 445 DLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            +F+ M Q  F PD  T   +L    S  A E  +E+H + +  G+ +D  V +A V MY
Sbjct: 321 TIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMY 380

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
           ++CG +  A+ +FD +  +++ +W  MI G      G +A++ F  MR+ G  PD  +F+
Sbjct: 381 IRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFV 440

Query: 564 SVLYA----------------CSHSGLVDE-------------GWRFFNMMRYECNIEPK 594
           ++L A                   +GLVD              G   +    ++  +E  
Sbjct: 441 NILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERN 500

Query: 595 LEHYACMVDLLSRTGNLSEAYR-FIEMM--PVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
           +  +  M+  L++ G   EA+  F++M+   + PDAT + S+L  C     ++  ++V  
Sbjct: 501 VTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHS 560

Query: 652 H------VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
           H      V +L   N      L ++YA+    ++ +++ + +  R +      SW  + G
Sbjct: 561 HAVNAGLVSDLRVGNA-----LVHMYAKCGSVDDARRVFDDMLERDVY-----SWTVMIG 610

Query: 706 KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
            +           H + +++L   L ++MK EG+ P
Sbjct: 611 GLA---------QHGRGLDAL--DLFVKMKLEGFKP 635



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 153/462 (33%), Positives = 231/462 (50%), Gaps = 30/462 (6%)

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MI GY   G AE  ++V+ +M   G   +  T +++L  C +  +L +G+ +HA  +++ 
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F  ++     L++MY KCG +D A  +F+KM ER+V+SWT MI G A  G    A   F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M REG  P+ Y   SIL+A A  G LE  K+VH +     +   L V NAL+ MYAK G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNF-EPDGVTMACILP 466
           S+ DA  VF+ M  +DI SW  MIG          A  LF+ M +    P+  T   IL 
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 467 ACA--SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           A A  S  ALE  +E+H +  + G  +D  V NA++ MY KCG +  AR +FD +  +D+
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           ISW  MI G   +G G +A   F  M+Q G  PD  +++S+L     +G     W +   
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTG----AWEWVKE 356

Query: 585 MR---YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           +     E  +   L   +  V +  R G++ +A    + + V  + T W +++ G     
Sbjct: 357 VHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAV-RNVTTWNAMIGGVA--- 412

Query: 642 EVKLAEKVAEHVFELE-----PDNTGYY-VLLANVYAEAEKW 677
           + K   +      ++      PD T +  +L ANV  EA +W
Sbjct: 413 QQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEW 454


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 296/797 (37%), Positives = 447/797 (56%), Gaps = 59/797 (7%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D   + ++L+  ADL+ +E GK++H+ + + G  +D   + + LV ++  CGD     
Sbjct: 94  KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY 153

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKC---- 207
           +VF++I       WN L+        ++ +L  F+ M    +   S+T  S V  C    
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213

Query: 208 -----------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
                                        +A+ G   ++  +  L      RD+V+WN +
Sbjct: 214 MPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           +S    N    + LE  +EM+  G   D  T+ +VL  C++   L  G+ +HA+ALK   
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333

Query: 299 SKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
             E SF  + L+DMY  C  +    RVF+ M +R +  W +MIAGY++      A+ LF 
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393

Query: 358 GMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
           GM    G+  +   +  ++ AC   G     + +H ++ +  +    +V N LMDMY++ 
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIGALD---------LFVAMLQNFE------------ 455
           G +  A  +F +M  +D+V+WNTMI             L +  +QN E            
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513

Query: 456 -PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            P+ +T+  ILP+CA+L+AL +G+EIH Y +++ ++ D  V +A+VDMY KCG L ++R 
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +FD IP K++I+W ++I  YGMHG G +AI     M   G++P+EV+FISV  ACSHSG+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD-ATIWGSL 633
           VDEG R F +M+ +  +EP  +HYAC+VDLL R G + EAY+ + MMP   + A  W SL
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
           L   RIH+ +++ E  A+++ +LEP+   +YVLLAN+Y+ A  W++  ++R  +  +G++
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           K PGCSWIE   +V+ FVAG SSHP ++K+   L+ L   M++EGY P T   L N +E 
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEED 813

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
           EKE+ LCGHSEKLA+AFGILN   G  IRV KNLRVC DCH   KF+SK   REI+LRD 
Sbjct: 814 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDV 873

Query: 814 NRFHHFKDGRCSCRGFW 830
            RFH FK+G CSC  +W
Sbjct: 874 RRFHRFKNGTCSCGDYW 890



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 219/432 (50%), Gaps = 32/432 (7%)

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           W  ++   + + +  + +  + +M+ LG   D      +L   A+   +  G+ +HA   
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 295 KACFSKE-ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           K  +  + ++  NTL+++Y KCGD     +VF+++ ER+ VSW S+I+       ++ A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 354 RLFRGMVREGIEPDVYAITSILHACA----CDGLLEIGKDVHDY-IKENDMQSSLYVSNA 408
             FR M+ E +EP  + + S++ AC+     +GL+ +GK VH Y +++ ++ S  ++ N 
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM-MGKQVHAYGLRKGELNS--FIINT 241

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL----DLFVAM-------LQNFEPD 457
           L+ MY K G +A ++ +      +D+V+WNT++ +L     L  A+       L+  EPD
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRN--VANAIVDMYVKCGVLVLARSL 515
             T++ +LPAC+ L  L  G+E+H Y L++G S D N  V +A+VDMY  C  ++  R +
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGRRV 360

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ-AGIEPDEVSFISVLYACSHSGL 574
           FD +  + +  W  MIAGY  +    +A+  F  M + AG+  +  +   V+ AC  SG 
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420

Query: 575 VD--EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
               E    F + R    ++        ++D+ SR G +  A R    M    D   W +
Sbjct: 421 FSRKEAIHGFVVKR---GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNT 476

Query: 633 LLCGCRI--HHE 642
           ++ G     HHE
Sbjct: 477 MITGYVFSEHHE 488



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 237/484 (48%), Gaps = 59/484 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N  +   C+   L +A+E L     E  + D  T  S+L  C+ L+ L  GK++H+  
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G + ++  +GS LV M+  C  +  GRRVF+ + + K+ +WN ++  YS+  + KE+
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 388

Query: 183 LYLFKKM-QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------- 221
           L LF  M +S G+ A+S T + V+      G   R +  H                    
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448

Query: 222 ------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV---- 265
                       ++F ++ DRD+V+WN MI+GY+ +   E  L +  +M NL   V    
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 508

Query: 266 -------DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
                  +  T++T+L  CA   AL  G+ +HA+A+K   + +++  + L+DMY+KCG L
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
             + +VF+++ +++V++W  +I  Y   G    AI L R M+ +G++P+     S+  AC
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628

Query: 379 ACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMP--VKDIV 435
           +  G+++ G  +   +K +  ++ S      ++D+  + G + +A  + N MP       
Sbjct: 629 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 688

Query: 436 SWNTMIGA------LDLFVAMLQN---FEPDGVTMACILPACASLAAL-ERGREIHGYIL 485
           +W++++GA      L++     QN    EP+  +   +L    S A L ++  E+   + 
Sbjct: 689 AWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMK 748

Query: 486 RHGI 489
             G+
Sbjct: 749 EQGV 752



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 152/311 (48%), Gaps = 26/311 (8%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L F R  H + L+A  +          D+ S    + GA  +F     RS   W  ++  
Sbjct: 22  LPFSRHKHPYLLRATPTSATE------DVASA---VSGAPSIFISQS-RSPEWWIDLLRS 71

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQS 401
             R  +   A+  +  M+  GI+PD YA  ++L A A    +E+GK +H ++ K      
Sbjct: 72  KVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVD 131

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
           S+ V+N L+++Y KCG       VF+++  ++ VSWN++I           AL+ F  ML
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191

Query: 452 -QNFEPDGVTMACILPACASLA---ALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            +N EP   T+  ++ AC++L     L  G+++H Y LR G   +  + N +V MY K G
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG 250

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            L  ++ L      +DL++W  +++    +    +A+    +M   G+EPDE +  SVL 
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310

Query: 568 ACSHSGLVDEG 578
           ACSH  ++  G
Sbjct: 311 ACSHLEMLRTG 321


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 296/797 (37%), Positives = 447/797 (56%), Gaps = 59/797 (7%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D   + ++L+  ADL+ +E GK++H+ + + G  +D   + + LV ++  CGD     
Sbjct: 94  KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY 153

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKC---- 207
           +VF++I       WN L+        ++ +L  F+ M    +   S+T  S V  C    
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213

Query: 208 -----------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
                                        +A+ G   ++  +  L      RD+V+WN +
Sbjct: 214 MPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           +S    N    + LE  +EM+  G   D  T+ +VL  C++   L  G+ +HA+ALK   
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333

Query: 299 SKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
             E SF  + L+DMY  C  +    RVF+ M +R +  W +MIAGY++      A+ LF 
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393

Query: 358 GMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
           GM    G+  +   +  ++ AC   G     + +H ++ +  +    +V N LMDMY++ 
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIGALD---------LFVAMLQNFE------------ 455
           G +  A  +F +M  +D+V+WNTMI             L +  +QN E            
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513

Query: 456 -PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            P+ +T+  ILP+CA+L+AL +G+EIH Y +++ ++ D  V +A+VDMY KCG L ++R 
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +FD IP K++I+W ++I  YGMHG G +AI     M   G++P+EV+FISV  ACSHSG+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD-ATIWGSL 633
           VDEG R F +M+ +  +EP  +HYAC+VDLL R G + EAY+ + MMP   + A  W SL
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
           L   RIH+ +++ E  A+++ +LEP+   +YVLLAN+Y+ A  W++  ++R  +  +G++
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           K PGCSWIE   +V+ FVAG SSHP ++K+   L+ L   M++EGY P T   L N +E 
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEED 813

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
           EKE+ LCGHSEKLA+AFGILN   G  IRV KNLRVC DCH   KF+SK   REI+LRD 
Sbjct: 814 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDV 873

Query: 814 NRFHHFKDGRCSCRGFW 830
            RFH FK+G CSC  +W
Sbjct: 874 RRFHRFKNGTCSCGDYW 890



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 219/432 (50%), Gaps = 32/432 (7%)

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           W  ++   + + +  + +  + +M+ LG   D      +L   A+   +  G+ +HA   
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 295 KACFSKE-ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           K  +  + ++  NTL+++Y KCGD     +VF+++ ER+ VSW S+I+       ++ A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 354 RLFRGMVREGIEPDVYAITSILHACA----CDGLLEIGKDVHDY-IKENDMQSSLYVSNA 408
             FR M+ E +EP  + + S++ AC+     +GL+ +GK VH Y +++ ++ S  ++ N 
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM-MGKQVHAYGLRKGELNS--FIINT 241

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL----DLFVAM-------LQNFEPD 457
           L+ MY K G +A ++ +      +D+V+WNT++ +L     L  A+       L+  EPD
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRN--VANAIVDMYVKCGVLVLARSL 515
             T++ +LPAC+ L  L  G+E+H Y L++G S D N  V +A+VDMY  C  ++  R +
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGRRV 360

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ-AGIEPDEVSFISVLYACSHSGL 574
           FD +  + +  W  MIAGY  +    +A+  F  M + AG+  +  +   V+ AC  SG 
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420

Query: 575 VD--EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
               E    F + R    ++        ++D+ SR G +  A R    M    D   W +
Sbjct: 421 FSRKEAIHGFVVKR---GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNT 476

Query: 633 LLCGCRI--HHE 642
           ++ G     HHE
Sbjct: 477 MITGYVFSEHHE 488



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 237/484 (48%), Gaps = 59/484 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N  +   C+   L +A+E L     E  + D  T  S+L  C+ L+ L  GK++H+  
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G + ++  +GS LV M+  C  +  GRRVF+ + + K+ +WN ++  YS+  + KE+
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 388

Query: 183 LYLFKKM-QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------- 221
           L LF  M +S G+ A+S T + V+      G   R +  H                    
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448

Query: 222 ------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV---- 265
                       ++F ++ DRD+V+WN MI+GY+ +   E  L +  +M NL   V    
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 508

Query: 266 -------DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
                  +  T++T+L  CA   AL  G+ +HA+A+K   + +++  + L+DMY+KCG L
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
             + +VF+++ +++V++W  +I  Y   G    AI L R M+ +G++P+     S+  AC
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628

Query: 379 ACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMP--VKDIV 435
           +  G+++ G  +   +K +  ++ S      ++D+  + G + +A  + N MP       
Sbjct: 629 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 688

Query: 436 SWNTMIGA------LDLFVAMLQN---FEPDGVTMACILPACASLAAL-ERGREIHGYIL 485
           +W++++GA      L++     QN    EP+  +   +L    S A L ++  E+   + 
Sbjct: 689 AWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMK 748

Query: 486 RHGI 489
             G+
Sbjct: 749 EQGV 752



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 152/311 (48%), Gaps = 26/311 (8%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L F R  H + L+A  +          D+ S    + GA  +F     RS   W  ++  
Sbjct: 22  LPFSRHKHPYLLRATPTSATE------DVASA---VSGAPSIFISQS-RSPEWWIDLLRS 71

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQS 401
             R  +   A+  +  M+  GI+PD YA  ++L A A    +E+GK +H ++ K      
Sbjct: 72  KVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVD 131

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
           S+ V+N L+++Y KCG       VF+++  ++ VSWN++I           AL+ F  ML
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191

Query: 452 -QNFEPDGVTMACILPACASLA---ALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            +N EP   T+  ++ AC++L     L  G+++H Y LR G   +  + N +V MY K G
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG 250

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            L  ++ L      +DL++W  +++    +    +A+    +M   G+EPDE +  SVL 
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310

Query: 568 ACSHSGLVDEG 578
           ACSH  ++  G
Sbjct: 311 ACSHLEMLRTG 321


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 305/800 (38%), Positives = 454/800 (56%), Gaps = 49/800 (6%)

Query: 73  FCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKV--HSIICESGIVID 130
            C  G L++A+ +L SS +   D   Y ++  LC   ++ E G +   H+        + 
Sbjct: 72  LCAHGELQQALWLLESSPEPP-DEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLR 130

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
              LG+ ++ M V  G+     +VF K+    VF WN+++  Y K G  +E+L L+ +M 
Sbjct: 131 ---LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRML 187

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAH----------------------------- 221
             G   D YTF CVL+    V +    ++ H                             
Sbjct: 188 WAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVE 247

Query: 222 ---KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
              K+FD +S  D +SWN MI+G+  N   E GLE+F  ML      +L T+ +V     
Sbjct: 248 AARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASG 307

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
               L F + +HA A+K  F+ +++F N+L+ MYS  G +  A  VF +M  R  +SWT+
Sbjct: 308 LLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTA 367

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           MI+GY + G  D A+ ++  M    + PD   + S L ACA  G L++G  +H+      
Sbjct: 368 MISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKG 427

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFV 448
               + V+NAL++MYAK   +  A  VF  MP KD++SW++MI           AL  F 
Sbjct: 428 FIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFR 487

Query: 449 AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
            ML + +P+ VT    L ACA+  +L  G+EIH ++LR GI+++  V NA++D+YVKCG 
Sbjct: 488 HMLADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQ 547

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
              A + F     KD++SW IM+AG+  HG G  A++ FN+M + G  PDEV+F+++L  
Sbjct: 548 TGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCG 607

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CS +G+V +GW  F+ M  + +I P L+HYACMVDLLSR G L+E Y FI  MP+ PDA 
Sbjct: 608 CSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAA 667

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           +WG+LL GCRIH  ++L E  A+ V ELEP++ GY+VLL+++YA+A  W EV K+R+ + 
Sbjct: 668 VWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMR 727

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
            +GL+ + GCSW+E+KG ++ F+    SHP  K+I  +L  +   MK  G+ P   Y+L 
Sbjct: 728 VKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLE 787

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           +  E+ K+  LCGHSE+LA+AFG++N   G +I VTKN   C  CH + + +SK  RREI
Sbjct: 788 D-KEVSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREI 846

Query: 809 VLRDSNRFHHFKDGRCSCRG 828
            +RD+  FHHF+DG CSC G
Sbjct: 847 TVRDTKEFHHFRDGSCSCGG 866



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 242/520 (46%), Gaps = 49/520 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +G + + G LE+A+++ +      ++ D  T+  +L+ C  +  L  G++VH+ +
Sbjct: 162 SWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHV 221

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G+ ++  VL + LV M+  CGD++  R+VF+ +       WN ++  + +    +  
Sbjct: 222 LRFGLGVEVDVLNA-LVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAG 280

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL------------------- 223
           L LF  M    +  +  T + V     ++ +    K+ H L                   
Sbjct: 281 LELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQM 340

Query: 224 -------------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                        F  +  RD +SW  MISGY  NG  +K LEV+  M     + D  T+
Sbjct: 341 YSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTV 400

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + L+ CA+ G L  G  +H  A    F + I   N L++MY+K   ++ AI VF+ M +
Sbjct: 401 ASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPD 460

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + V+SW+SMIAG+        A+  FR M+ + ++P+     + L ACA  G L  GK++
Sbjct: 461 KDVISWSSMIAGFCFNHKNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGSLRCGKEI 519

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H ++    + S  YV NAL+D+Y KCG    A + F     KD+VSWN M+         
Sbjct: 520 HAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHG 579

Query: 443 --ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREI-HGYILRHGISADRNVANA 498
             AL  F  ML+  E PD VT   +L  C+    + +G E+ H    ++ I  +      
Sbjct: 580 DIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYAC 639

Query: 499 IVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
           +VD+  + G L    +  + +P   D   W  ++ G  +H
Sbjct: 640 MVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIH 679


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 296/797 (37%), Positives = 447/797 (56%), Gaps = 59/797 (7%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D   + ++L+  ADL+ +E GK++H+ + + G  +D   + + LV ++  CGD     
Sbjct: 7   KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY 66

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKC---- 207
           +VF++I       WN L+        ++ +L  F+ M    +   S+T  S V  C    
Sbjct: 67  KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 126

Query: 208 -----------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
                                        +A+ G   ++  +  L      RD+V+WN +
Sbjct: 127 MPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 186

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           +S    N    + LE  +EM+  G   D  T+ +VL  C++   L  G+ +HA+ALK   
Sbjct: 187 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 246

Query: 299 SKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
             E SF  + L+DMY  C  +    RVF+ M +R +  W +MIAGY++      A+ LF 
Sbjct: 247 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 306

Query: 358 GMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
           GM    G+  +   +  ++ AC   G     + +H ++ +  +    +V N LMDMY++ 
Sbjct: 307 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 366

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIGALD---------LFVAMLQNFE------------ 455
           G +  A  +F +M  +D+V+WNTMI             L +  +QN E            
Sbjct: 367 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 426

Query: 456 -PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            P+ +T+  ILP+CA+L+AL +G+EIH Y +++ ++ D  V +A+VDMY KCG L ++R 
Sbjct: 427 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 486

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +FD IP K++I+W ++I  YGMHG G +AI     M   G++P+EV+FISV  ACSHSG+
Sbjct: 487 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 546

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD-ATIWGSL 633
           VDEG R F +M+ +  +EP  +HYAC+VDLL R G + EAY+ + MMP   + A  W SL
Sbjct: 547 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 606

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
           L   RIH+ +++ E  A+++ +LEP+   +YVLLAN+Y+ A  W++  ++R  +  +G++
Sbjct: 607 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 666

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           K PGCSWIE   +V+ FVAG SSHP ++K+   L+ L   M++EGY P T   L N +E 
Sbjct: 667 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEED 726

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
           EKE+ LCGHSEKLA+AFGILN   G  IRV KNLRVC DCH   KF+SK   REI+LRD 
Sbjct: 727 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDV 786

Query: 814 NRFHHFKDGRCSCRGFW 830
            RFH FK+G CSC  +W
Sbjct: 787 RRFHRFKNGTCSCGDYW 803



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 237/484 (48%), Gaps = 59/484 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N  +   C+   L +A+E L     E  + D  T  S+L  C+ L+ L  GK++H+  
Sbjct: 182 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 241

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G + ++  +GS LV M+  C  +  GRRVF+ + + K+ +WN ++  YS+  + KE+
Sbjct: 242 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 301

Query: 183 LYLFKKM-QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------- 221
           L LF  M +S G+ A+S T + V+      G   R +  H                    
Sbjct: 302 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 361

Query: 222 ------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV---- 265
                       ++F ++ DRD+V+WN MI+GY+ +   E  L +  +M NL   V    
Sbjct: 362 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 421

Query: 266 -------DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
                  +  T++T+L  CA   AL  G+ +HA+A+K   + +++  + L+DMY+KCG L
Sbjct: 422 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 481

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
             + +VF+++ +++V++W  +I  Y   G    AI L R M+ +G++P+     S+  AC
Sbjct: 482 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 541

Query: 379 ACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMP--VKDIV 435
           +  G+++ G  +   +K +  ++ S      ++D+  + G + +A  + N MP       
Sbjct: 542 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 601

Query: 436 SWNTMIGA------LDLFVAMLQN---FEPDGVTMACILPACASLAAL-ERGREIHGYIL 485
           +W++++GA      L++     QN    EP+  +   +L    S A L ++  E+   + 
Sbjct: 602 AWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMK 661

Query: 486 RHGI 489
             G+
Sbjct: 662 EQGV 665



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 209/409 (51%), Gaps = 32/409 (7%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE-ISFNNTLLDMYSKCG 316
           M+ LG   D      +L   A+   +  G+ +HA   K  +  + ++  NTL+++Y KCG
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
           D     +VF+++ ER+ VSW S+I+       ++ A+  FR M+ E +EP  + + S++ 
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 377 ACA----CDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
           AC+     +GL+ +GK VH Y +++ ++ S  ++ N L+ MY K G +A ++ +      
Sbjct: 121 ACSNLPMPEGLM-MGKQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGG 177

Query: 432 KDIVSWNTMIGAL----DLFVAM-------LQNFEPDGVTMACILPACASLAALERGREI 480
           +D+V+WNT++ +L     L  A+       L+  EPD  T++ +LPAC+ L  L  G+E+
Sbjct: 178 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 237

Query: 481 HGYILRHGISADRN--VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           H Y L++G S D N  V +A+VDMY  C  ++  R +FD +  + +  W  MIAGY  + 
Sbjct: 238 HAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE 296

Query: 539 FGCDAIATFNDMRQ-AGIEPDEVSFISVLYACSHSGLVD--EGWRFFNMMRYECNIEPKL 595
              +A+  F  M + AG+  +  +   V+ AC  SG     E    F + R    ++   
Sbjct: 297 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR---GLDRDR 353

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI--HHE 642
                ++D+ SR G +  A R    M    D   W +++ G     HHE
Sbjct: 354 FVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHE 401


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 303/813 (37%), Positives = 469/813 (57%), Gaps = 50/813 (6%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  IG +   G    A+ + ++   E   +   ++ ++L+ CA L+ +  G ++HS++ 
Sbjct: 150 WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV 209

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFIWNLLMHEYSKTGNFKES 182
           + G     G + + LV M+    DL   RR+F+   + G   +WN ++  YS +G   E+
Sbjct: 210 KLGYH-STGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 268

Query: 183 LYLFKKMQSLGIAADSYTF--------------------SCVLK----------CLAVVG 212
           L LF++M   G A +SYT                     + VLK          C A++ 
Sbjct: 269 LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIA 328

Query: 213 NSRR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
              R   +  A ++  ++++ DVV+WN +I GY+ N + ++ LE F +M+  G   D  +
Sbjct: 329 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 388

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           M ++++       L+ G  +HA+ +K  +   +   NTL+DMYSKC       R F +M 
Sbjct: 389 MTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH 448

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ++ ++SWT++IAGYA+      A+ LFR + ++ +E D   + SIL A +    + I K+
Sbjct: 449 DKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKE 508

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H +I    +  ++ + N L+D+Y KC +M  A  VF  +  KD+VSW +MI        
Sbjct: 509 IHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGN 567

Query: 443 ---ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              A++LF  M++     D V + CIL A ASL+AL +GREIH Y+LR G   + ++A A
Sbjct: 568 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA 627

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +VDMY  CG L  A+++FD I  K L+ +T MI  YGMHG G  A+  F+ MR   + PD
Sbjct: 628 VVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPD 687

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            +SF+++LYACSH+GL+DEG  F  +M +E  +EP  EHY C+VD+L R   + EA+ F+
Sbjct: 688 HISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV 747

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           +MM   P A +W +LL  CR H E ++ E  A+ + ELEP N G  VL++NV+AE  +W 
Sbjct: 748 KMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 807

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE- 737
           +V+K+R K+   G++K+PGCSWIE+ GKV+ F A   SHP +K+I   L  +  +++RE 
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREV 867

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           GY   T++ L N DE EK   L GHSE++A+A+G+L  P    +R+TKNLRVC DCH   
Sbjct: 868 GYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFC 927

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K +SK  RR+IV+RD+NRFHHF+ G CSC   W
Sbjct: 928 KLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 194/378 (51%), Gaps = 13/378 (3%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K + + G    + DA K+FDE+ DR   +WN MI  Y++NG     L ++  M   G  +
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
            L++   +L  CA    +  G  +H+  +K  +       N L+ MY+K  DL  A R+F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240

Query: 326 EKMGER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           +   E+   V W S+++ Y+  G     + LFR M   G  P+ Y I S L AC      
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300

Query: 385 EIGKDVH-DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           ++GK++H   +K +   S LYV NAL+ MY +CG M  AE +  QM   D+V+WN++I  
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360

Query: 443 ---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    AL+ F  M+    + D V+M  I+ A   L+ L  G E+H Y+++HG  ++
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             V N ++DMY KC +       F  +  KDLISWT +IAGY  +    +A+  F D+ +
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480

Query: 553 AGIEPDEVSFISVLYACS 570
             +E DE+   S+L A S
Sbjct: 481 KRMEIDEMILGSILRASS 498



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 171/352 (48%), Gaps = 25/352 (7%)

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF-NNTLLDM 311
           E F+ +     N  +     VL  C    A+  GR +H+   K   S E+ F    L+ M
Sbjct: 66  EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y KCG LD A +VF++M +R+  +W +MI  Y   G    A+ L+  M  EG+   + + 
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            ++L ACA    +  G ++H  + +    S+ ++ NAL+ MYAK   ++ A  +F+    
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245

Query: 432 K-DIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGRE 479
           K D V WN+++ +          L+LF  M +    P+  T+   L AC   +  + G+E
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305

Query: 480 IHGYILRHGI-SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           IH  +L+    S++  V NA++ MY +CG +  A  +   +   D+++W  +I GY  + 
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACS-----------HSGLVDEGW 579
              +A+  F+DM  AG + DEVS  S++ A             H+ ++  GW
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  550 bits (1418), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 300/818 (36%), Positives = 446/818 (54%), Gaps = 79/818 (9%)

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           K K +  T  SIL  C+DL+ L+ GK++H  +   G+V +D  + S  V  +  C  ++E
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMV-EDVFVSSAFVNFYAKCLCVRE 194

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
            + VF+ + +  V  WN L   Y   G  ++ L +F++M   G+  D  T SC+L   + 
Sbjct: 195 AQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSD 254

Query: 211 VGNSRR--------------------------------VKDAHKLFDELSDRDVVSWNCM 238
           + + +                                 V++A  +FD +  R+V++WN +
Sbjct: 255 LQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSL 314

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
            S Y+  G  +KGL VF+EM   G   D   M ++L  C+    L  G+ +H FA+K   
Sbjct: 315 ASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGM 374

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
            +++     L+++Y+ C  +  A  VF+ M  R+VV+W S+ + Y   G     + +FR 
Sbjct: 375 VEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFRE 434

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           MV  G++PD+  + SILHAC+    L+ GK +H +   + M   ++V NAL+ +YAKC  
Sbjct: 435 MVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVC 494

Query: 419 MADAESVFNQMPVKDIVSWN-----------------------------------TMIG- 442
           + +A+ VF+ +P +++ SWN                                    +IG 
Sbjct: 495 VREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGG 554

Query: 443 ---------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    A+++F  M    F+PD  T+  IL AC+    L  G+EIH Y+ RH    D
Sbjct: 555 CVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWD 614

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
               NA+VDMY KCG L L+R++FDM+P KD+ SW  MI   GMHG G +A++ F  M  
Sbjct: 615 LARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLL 674

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           + ++PD  +F  VL ACSHS LV+EG + FN M  +  +EP+ EHY C+VD+ SR G L 
Sbjct: 675 SMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLE 734

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           EAY FI+ MP+ P A  W + L GCR++  V+LA+  A+ +FE++P+ +  YV L N+  
Sbjct: 735 EAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILV 794

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
            A+ W E  K+R+ +  RG+ K PGCSW  +  +V+ FVAG  S+  + KI + L  L  
Sbjct: 795 TAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFA 854

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
           ++K  GY P T Y L + D+ EK  +LC HSEKLA+AFGILNL    TIRV KNLR+CGD
Sbjct: 855 KIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGD 914

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CH   K+MS      IV+RDS RFHHFK+G CSC+ FW
Sbjct: 915 CHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 184/676 (27%), Positives = 325/676 (48%), Gaps = 106/676 (15%)

Query: 86  LYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
           +Y+S ++   K D   + ++ + CA  +     K+ H      G V+ D  +G+  +  +
Sbjct: 27  IYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCG-VMSDVSIGNAFIHAY 85

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
             C  ++  RRVF+ +    V  WN L   Y   G  ++ L +F+KM    + A+  T S
Sbjct: 86  GKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVS 145

Query: 203 CVLKCLAVVGNSRR--------------------------------VKDAHKLFDELSDR 230
            +L   + + + +                                 V++A  +FD +  R
Sbjct: 146 SILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHR 205

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           DVV+WN + S Y+  G  +KGL VF+EM+  G   D  T+  +LS C++   L  G+A+H
Sbjct: 206 DVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIH 265

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
            FALK    + +  +N L+++Y  C  +  A  VF+ M  R+V++W S+ + Y   G   
Sbjct: 266 GFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQ 325

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
             + +FR M   G++PD  A++SIL AC+    L+ GK +H +  ++ M   ++V  AL+
Sbjct: 326 KGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALV 385

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGV 459
           ++YA C  + +A++VF+ MP +++V+WN++             L++F  M+ N  +PD V
Sbjct: 386 NLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLV 445

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           TM  IL AC+ L  L+ G+ IHG+ +RHG+  D  V NA++ +Y KC  +  A+ +FD+I
Sbjct: 446 TMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLI 505

Query: 520 PAKDLISWTIMIAGY--------GMHGF--------------------GC-------DAI 544
           P +++ SW  ++  Y        G++ F                    GC       +A+
Sbjct: 506 PHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAM 565

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG----------WRFFNMMRYECNIEPK 594
             F  M+  G +PDE +  S+L ACS S  +  G          W+ +++ R        
Sbjct: 566 EIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTN------ 619

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
                 +VD+ ++ G LS +    +MMP+  D   W +++    +H   K A  + E + 
Sbjct: 620 -----ALVDMYAKCGGLSLSRNVFDMMPIK-DVFSWNTMIFANGMHGNGKEALSLFEKML 673

Query: 655 --ELEPDNTGYYVLLA 668
              ++PD+  +  +L+
Sbjct: 674 LSMVKPDSATFTCVLS 689



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 209/404 (51%), Gaps = 17/404 (4%)

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           I +G+  + ++++      G   D    + V   CA     +  +  H  A +     ++
Sbjct: 16  IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
           S  N  +  Y KC  ++GA RVF+ +  R VV+W S+ A Y   G     + +FR M   
Sbjct: 76  SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLN 135

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
            ++ +   ++SIL  C+    L+ GK++H ++  + M   ++VS+A ++ YAKC  + +A
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREA 195

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
           ++VF+ MP +D+V+WN++             L++F  M L   +PD VT++CIL AC+ L
Sbjct: 196 QTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDL 255

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
             L+ G+ IHG+ L+HG+  +  V+NA+V++Y  C  +  A+++FD++P +++I+W  + 
Sbjct: 256 QDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLA 315

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           + Y   GF    +  F +M   G++PD ++  S+L ACS    +  G            +
Sbjct: 316 SCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMV 375

Query: 592 EPKLEHYAC--MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
           E   + + C  +V+L +    + EA    ++MP   +   W SL
Sbjct: 376 E---DVFVCTALVNLYANCLCVREAQTVFDLMP-HRNVVTWNSL 415


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 282/705 (40%), Positives = 414/705 (58%), Gaps = 44/705 (6%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--------------------- 207
           ++  Y+K+ +   +L  F +M+   +    Y F+ +LK                      
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 208 -----LAVVG------NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
                 A+ G        R++ DA+ +FD + +RD+V WN MISGY  NG A+  L +  
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
            M   G   D  T+V++L   A+   L  G AVH + L+A F   ++ +  L+DMYSKCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
            +  A  +F+ M  R+VVSW SMI GY + G  +GA+ +F+ M+ EG++P    +   LH
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
           ACA  G LE GK VH  + +  + S + V N+L+ MY+KC  +  A  +F  +  K +VS
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300

Query: 437 WNTMI----------GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYIL 485
           WN MI           AL+ F  M  +N +PD  TM  ++PA A L+   + + IHG ++
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
           R  +  +  V  A+VDMY KCG +  AR LFDM+ A+ +I+W  MI GYG HG G  ++ 
Sbjct: 361 RRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVE 420

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLL 605
            F +M++  I+P++++F+  L ACSHSGLV+EG  FF  M+ +  IEP ++HY  MVDLL
Sbjct: 421 LFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLL 480

Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV 665
            R G L++A+ FI+ MP+ P  T++G++L  C+IH  V L EK A  +F+L PD+ GY+V
Sbjct: 481 GRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHV 540

Query: 666 LLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIES 725
           LLAN+YA A  W +V K+R  + + GL+K PGCS +EI  +V+ F +G +SHP +KKI S
Sbjct: 541 LLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYS 600

Query: 726 LLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTK 785
            L+ L  E++  GY P T       D+++ ++ L  HSEKLA+AFG+LN   G  I + K
Sbjct: 601 YLETLVDEIRAAGYVPDTNSIHDVEDDVKVQL-LNTHSEKLAIAFGLLNTSTGTPIHIRK 659

Query: 786 NLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           NLRVCGDCH   K++S    REI++RD +RFH FKDG CSC  +W
Sbjct: 660 NLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 226/472 (47%), Gaps = 45/472 (9%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           +  +L+LC D   L+ GK++H  +  SG   +   + + +V M+  C  + +   +F+++
Sbjct: 33  FTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAM-TGVVNMYAKCRQINDAYNMFDRM 91

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----------L 208
               +  WN ++  Y++ G  K +L L  +M   G   DS T   +L            +
Sbjct: 92  PERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGM 151

Query: 209 AVVGNSRR----------------------VKDAHKLFDELSDRDVVSWNCMISGYIANG 246
           AV G   R                      V  A  +FD +  R VVSWN MI GY+ +G
Sbjct: 152 AVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSG 211

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
            AE  + +F++ML+ G      T++  L  CA+ G L  G+ VH    +     ++S  N
Sbjct: 212 DAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMN 271

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           +L+ MYSKC  +D A  +F+ +  +++VSW +MI GYA+ G  + A+  F  M    I+P
Sbjct: 272 SLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKP 331

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D + + S++ A A   +    K +H  +    +  +++V  AL+DMYAKCG++  A  +F
Sbjct: 332 DSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLF 391

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALE 475
           + M  + +++WN MI           +++LF  M +   +P+ +T  C L AC+    +E
Sbjct: 392 DMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVE 451

Query: 476 RGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
            G      + + +GI    +   A+VD+  + G L  A      +P K  I+
Sbjct: 452 EGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGIT 503



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 196/423 (46%), Gaps = 41/423 (9%)

Query: 57  KTLVCKTKNYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLED 114
           + LVC    +N  I  + + G  + A+ ++   S E  + D+ T  SIL   AD + L  
Sbjct: 94  RDLVC----WNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRI 149

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           G  VH  +  +G      V  + LV M+  CG +   R +F+ +D+  V  WN ++  Y 
Sbjct: 150 GMAVHGYVLRAGFESLVNV-STALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYV 208

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDV- 232
           ++G+ + ++ +F+KM   G+   + T    L   A +G+  R K  HKL D+L  D DV 
Sbjct: 209 QSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVS 268

Query: 233 ------------------------------VSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                                         VSWN MI GY  NG   + L  F EM +  
Sbjct: 269 VMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRN 328

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
              D  TMV+V+   A        + +H   ++    K +     L+DMY+KCG +  A 
Sbjct: 329 IKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTAR 388

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
           ++F+ M  R V++W +MI GY   G+   ++ LF+ M +  I+P+       L AC+  G
Sbjct: 389 KLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSG 448

Query: 383 LLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD-IVSWNTM 440
           L+E G    + +K++  ++ ++    A++D+  + G +  A     +MP+K  I  +  M
Sbjct: 449 LVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAM 508

Query: 441 IGA 443
           +GA
Sbjct: 509 LGA 511


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 315/841 (37%), Positives = 465/841 (55%), Gaps = 105/841 (12%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
            +S+  S  D  +  ++   C   KSL   + +H  +   G+  D     + ++ M++T 
Sbjct: 21  FFSTASSTTDLTS--TLFHQC---KSLASAELIHQQLLVQGLPHDP----THIISMYLTF 71

Query: 146 GDLKEGRRVFNKI--DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
               +   V  ++   +  VF WN L+      G  ++ L L+++MQ LG   D YTF  
Sbjct: 72  NSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPF 131

Query: 204 VLKC--------------------------------LAVVGNSRRVKDAHKLFDELSDR- 230
           VLK                                 +++ G     ++A ++FDE+ +R 
Sbjct: 132 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 191

Query: 231 --DVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGR 287
             D+VSWN +++ Y+  G + + +++F+ M  +LG   D  ++V VL  CA+ GA   G+
Sbjct: 192 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 251

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            VH +AL++   +++   N ++DMY+KCG ++ A +VFE+M  + VVSW +M+ GY++ G
Sbjct: 252 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 311

Query: 348 VFDGAIRLF------------------------RGMVRE-----------GIEPDVYAIT 372
            FD A+ LF                        RG+  E           G EP+V  + 
Sbjct: 312 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLV 371

Query: 373 SILHACACDGLLEIGKDVHDY-------IKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           S+L  CA  G L  GK+ H +       + END    L V NAL+DMY+KC S   A ++
Sbjct: 372 SLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 431

Query: 426 FNQMPVKD--IVSWNTMIG----------ALDLFVAMLQ--NF-EPDGVTMACILPACAS 470
           F+ +P KD  +V+W  +IG          AL+LF  MLQ  NF  P+  T++C L ACA 
Sbjct: 432 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 491

Query: 471 LAALERGREIHGYILRHGI-SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           L AL  GR+IH Y+LR+   SA   VAN ++DMY K G +  AR +FD +  ++ +SWT 
Sbjct: 492 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 551

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           ++ GYGMHG G +A+  F +M++ G+ PD V+F+ VLYACSHSG+VD+G  +FN M  + 
Sbjct: 552 LMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 611

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            + P  EHYACMVDLLSR G L EA   I  MP+ P   +W +LL  CR++  V+L E  
Sbjct: 612 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYA 671

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           A  + ELE  N G Y LL+N+YA A  W++V ++R  +   G+KK PGCSW++ +     
Sbjct: 672 ANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTAT 731

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F AG  SHP +++I  LL+ L   +K  GY P  R+AL + D+ EK   L  HSEKLA+A
Sbjct: 732 FFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALA 791

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           +GIL    G  IR+TKNLR CGDCH    ++S     EI++RDS+RFHHFK+G CSCRG+
Sbjct: 792 YGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGY 851

Query: 830 W 830
           W
Sbjct: 852 W 852



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 241/485 (49%), Gaps = 62/485 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N+ +  + + G+  +AM++     +    + D  +  ++L  CA + +   GK+VH  
Sbjct: 197 SWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGY 256

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
              SG+  +D  +G+ +V M+  CG ++E  +VF ++    V  WN ++  YS+ G F +
Sbjct: 257 ALRSGL-FEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDD 315

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
           +L LF+K++                                  +E  + +VV+W+ +I+G
Sbjct: 316 ALGLFEKIR----------------------------------EEKIELNVVTWSAVIAG 341

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS-- 299
           Y   G+  + L+VF++M   G   ++ T+V++LSGCA  G L+ G+  H  A+K   +  
Sbjct: 342 YAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLD 401

Query: 300 -----KEISFNNTLLDMYSKCGDLDGAIRVFEKMG--ERSVVSWTSMIAGYAREGVFDGA 352
                 ++   N L+DMYSKC     A  +F+ +   +RSVV+WT +I G A+ G  + A
Sbjct: 402 ENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEA 461

Query: 353 IRLFRGMVREG--IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS-LYVSNAL 409
           + LF  M++    + P+ + I+  L ACA  G L  G+ +H Y+  N  +S+ L+V+N L
Sbjct: 462 LELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCL 521

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDG 458
           +DMY+K G +  A  VF+ M  ++ VSW +++           AL +F  M +    PDG
Sbjct: 522 IDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDG 581

Query: 459 VTMACILPACASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
           VT   +L AC+    +++G    +G     G+         +VD+  + G L  A  L  
Sbjct: 582 VTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIR 641

Query: 518 MIPAK 522
            +P K
Sbjct: 642 GMPMK 646


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 305/807 (37%), Positives = 440/807 (54%), Gaps = 71/807 (8%)

Query: 95   DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRR 153
            D   + ++L+  A +  L  GK++H+ + + G      V + + LV M+  CGDL   R+
Sbjct: 329  DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388

Query: 154  VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKCLAVVG 212
            VF+ I +     WN ++    +   ++ SL+LF+ M S  +   S+T  S    C  V G
Sbjct: 389  VFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRG 448

Query: 213  NSR-------------------------------RVKDAHKLFDELSDRDVVSWNCMISG 241
              R                               RV DA  LF     +D+VSWN +IS 
Sbjct: 449  GVRLGKQVHAYTLRNGDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISS 508

Query: 242  YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
               N   E+ L     M+  G   D  T+ +VL  C+    L  GR +H +AL+     E
Sbjct: 509  LSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIE 568

Query: 302  ISFNNT-LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
             SF  T L+DMY  C        VF+ +  R+V  W +++AGYAR    D A+RLF  M+
Sbjct: 569  NSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMI 628

Query: 361  REG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             E    P+     S+L AC    +    + +H YI +       YV NALMDMY++ G +
Sbjct: 629  SESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRV 688

Query: 420  ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN---------------- 453
              ++++F +M  +DIVSWNTMI           AL+L   M +                 
Sbjct: 689  EISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDG 748

Query: 454  ---FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
               F+P+ VT+  +LP CA+LAAL +G+EIH Y ++  ++ D  V +A+VDMY KCG L 
Sbjct: 749  GVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLN 808

Query: 511  LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG------IEPDEVSFIS 564
            LA  +FD +P +++I+W ++I  YGMHG G +A+  F  M   G      I P+EV++I+
Sbjct: 809  LASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIA 868

Query: 565  VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
            +  ACSHSG+VDEG   F+ M+    +EP+ +HYAC+VDLL R+G + EAY  I  MP  
Sbjct: 869  IFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSN 928

Query: 625  PDAT-IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
             +    W SLL  CRIH  V+  E  A+H+F LEP+   +YVL++N+Y+ A  W++   +
Sbjct: 929  LNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGV 988

Query: 684  REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
            R+K+   G++K PGCSWIE   +V+ F++G +SHP +K++   L+ L   M++EGY P  
Sbjct: 989  RKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDI 1048

Query: 744  RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
               L N D+ EKE  LCGHSE+LA+AFG+LN P G TIRV KNLRVC DCH   K +SK 
Sbjct: 1049 SCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKI 1108

Query: 804  ARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REI+LRD  RFHHF +G CSC  +W
Sbjct: 1109 VDREIILRDVRRFHHFANGTCSCGDYW 1135



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/548 (24%), Positives = 239/548 (43%), Gaps = 77/548 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKS-LEDGKKVHSI 121
           ++N+ I   C     E ++ +  L  SE     + T  S+   C+ ++  +  GK+VH+ 
Sbjct: 400 SWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAY 459

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
              +G +       + LV M+   G + + + +F   D   +  WN ++   S+   F+E
Sbjct: 460 TLRNGDL--RTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEE 517

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLK---------------CLAV----------VG---- 212
           +L     M   G+  D  T + VL                C A+          VG    
Sbjct: 518 ALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALV 577

Query: 213 ----NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDL 267
               N ++ K    +FD +  R V  WN +++GY  N   ++ L +F EM++   F  + 
Sbjct: 578 DMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNA 637

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T  +VL  C  C        +H + +K  F K+    N L+DMYS+ G ++ +  +F +
Sbjct: 638 TTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGR 697

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE------------------PDVY 369
           M +R +VSW +MI G    G +D A+ L   M R   E                  P+  
Sbjct: 698 MNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSV 757

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            + ++L  CA    L  GK++H Y  +  +   + V +AL+DMYAKCG +  A  VF+QM
Sbjct: 758 TLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQM 817

Query: 430 PVKDIVSWNTMI----------GALDLFVAML-------QNFEPDGVTMACILPACASLA 472
           P++++++WN +I           AL+LF  M        +   P+ VT   I  AC+   
Sbjct: 818 PIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSG 877

Query: 473 ALERGREI-HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA--KDLISWTI 529
            ++ G  + H     HG+    +    +VD+  + G +  A  L + +P+    + +W+ 
Sbjct: 878 MVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSS 937

Query: 530 MIAGYGMH 537
           ++    +H
Sbjct: 938 LLGACRIH 945



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 22/254 (8%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K ++ T  ++L  CA L +L  GK++H+   +  + +D  V GS LV M+  CG L    
Sbjct: 753 KPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAV-GSALVDMYAKCGCLNLAS 811

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG------IAADSYTFSCVLK 206
           RVF+++    V  WN+L+  Y   G  +E+L LF+ M + G      I  +  T+  +  
Sbjct: 812 RVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAI-- 869

Query: 207 CLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNL 261
             A   +S  V +   LF  +     V      + C++     +G  ++  E+   M + 
Sbjct: 870 -FAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSN 928

Query: 262 GFNVDLATMVTVLSGCANCGALMFGR--AVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
              VD  +  ++L  C    ++ FG   A H F L+   +        + ++YS  G  D
Sbjct: 929 LNKVDAWS--SLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVL---MSNIYSSAGLWD 983

Query: 320 GAIRVFEKMGERSV 333
            A+ V +KM E  V
Sbjct: 984 QALGVRKKMKEMGV 997


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 291/815 (35%), Positives = 464/815 (56%), Gaps = 52/815 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            +NA +G F   G   +A+E LY   +     ID  T+ S+L+ C  L     G ++H +
Sbjct: 112 TWNAMMGAFVSSGKYLEAIE-LYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGV 170

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI--DNGKVFIWNLLMHEYSKTGNF 179
             + G   +   + + L+ M+  CGDL   R +F+ I  +      WN ++  +   G  
Sbjct: 171 AVKCGFG-EFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKC 229

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLK--------------------------------C 207
            E+L LF++MQ +G+A+++YTF   L+                                 
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANAL 289

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           +A+     R++DA ++F  +  RD VSWN ++SG + N +    L  F++M N     D 
Sbjct: 290 IAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQ 349

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            +++ +++     G L+ G+ VHA+A++      +   NTL+DMY+KC  +      FE 
Sbjct: 350 VSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFEC 409

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M E+ ++SWT++IAGYA+      AI LFR +  +G++ D   I S+L AC+        
Sbjct: 410 MHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFI 469

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
           +++H Y+ + D+ + + + NA++++Y + G    A   F  +  KDIVSW +MI      
Sbjct: 470 REIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHN 528

Query: 443 -----ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL+LF ++ Q N +PD + +   L A A+L++L++G+EIHG+++R G   +  +A
Sbjct: 529 GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA 588

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           +++VDMY  CG +  +R +F  +  +DLI WT MI   GMHG G +AIA F  M    + 
Sbjct: 589 SSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVI 648

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           PD ++F+++LYACSHSGL+ EG RFF +M+Y   +EP  EHYACMVDLLSR+ +L EAY+
Sbjct: 649 PDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQ 708

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
           F+  MP+ P + +W +LL  C IH   +L E  A+ + + +  N+G Y L++N++A   +
Sbjct: 709 FVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGR 768

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL-RLEMK 735
           W +V+++R ++   GLKKNPGCSWIE+  K++ F+A   SHP    I   L +  +L  K
Sbjct: 769 WNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGK 828

Query: 736 REGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHE 795
           + GY  +T++   N  E EK   L  HSE+LA+ +G+L  P G +IR+TKNLR+C DCH 
Sbjct: 829 KGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHT 888

Query: 796 MAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             K  S+ ++R +V+RD+NRFHHF+ G CSC  FW
Sbjct: 889 FFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 176/636 (27%), Positives = 314/636 (49%), Gaps = 64/636 (10%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L LC  +K+L  G+++H+ + +S +      L +KL+ M+  CG LK+  +VF+++   
Sbjct: 52  LLDLCVAVKALPQGQQLHARLLKSHL---SAFLATKLLHMYEKCGSLKDAVKVFDEMTER 108

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
            +F WN +M  +  +G + E++ L+K+M+ LG+A D+ TF  VLK    +G SR   + H
Sbjct: 109 TIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168

Query: 222 K--------------------------------LFDE--LSDRDVVSWNCMISGYIANGV 247
                                            LFD   +   D VSWN +IS ++  G 
Sbjct: 169 GVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGK 228

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
             + L +F+ M  +G   +  T V  L G  +   +  G  +H  ALK+    ++   N 
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANA 288

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L+ MY+KCG ++ A RVF  M  R  VSW ++++G  +  ++  A+  FR M     +PD
Sbjct: 289 LIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPD 348

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
             ++ +++ A    G L  GK+VH Y   N + S++ + N L+DMYAKC  +      F 
Sbjct: 349 QVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFE 408

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALER 476
            M  KD++SW T+I           A++LF  + ++  + D + +  +L AC+ L +   
Sbjct: 409 CMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNF 468

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
            REIHGY+ +  + AD  + NAIV++Y + G    AR  F+ I +KD++SWT MI     
Sbjct: 469 IREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVH 527

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPKL 595
           +G   +A+  F  ++Q  I+PD ++ IS L A ++   + +G      ++R    +E  +
Sbjct: 528 NGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPI 587

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH----HEVKLAEKVAE 651
              + +VD+ +  G +  + +    +    D  +W S++    +H      + L +K+ +
Sbjct: 588 A--SSLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMHGCGNEAIALFKKMTD 644

Query: 652 HVFELEPDNTGYYVLL-----ANVYAEAEKWEEVKK 682
               + PD+  +  LL     + +  E +++ E+ K
Sbjct: 645 E--NVIPDHITFLALLYACSHSGLMVEGKRFFEIMK 678


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 310/806 (38%), Positives = 461/806 (57%), Gaps = 58/806 (7%)

Query: 69  EIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIV 128
           E+   C  G L +A+ +L SS +   D   Y ++ +LC   +++E G +     C     
Sbjct: 68  ELRALCSHGQLAQALWLLESSAEPP-DEDAYVALFRLCEWRRAVEPGLRA----CAHA-- 120

Query: 129 IDD-----GV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            DD     G+ LG+ ++ M V  G+     RVF K+    VF WN+++  Y K G  +E+
Sbjct: 121 -DDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEA 179

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH--------------------- 221
           L L+ +M   G+  D YTF CVL+    V + R  ++ H                     
Sbjct: 180 LDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTM 239

Query: 222 -----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                      K+FD ++  D +SWN MI+G+  NG    GLE+F  ML      +L T+
Sbjct: 240 YAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTI 299

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +V         + F + +H  A+K  F+ +++F N+L+ MY+  G +  A  VF +M  
Sbjct: 300 TSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDT 359

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R  +SWT+MI+GY + G  D A+ ++  M    + PD   I S L ACAC G L++G  +
Sbjct: 360 RDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKL 419

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H+  +     S + V+NAL++MYAK   +  A  VF  MP KD+VSW++MI         
Sbjct: 420 HELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRN 479

Query: 443 --ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             AL  F  ML + +P+ VT    L ACA+  AL  G+EIH ++LR GI+ +  + NA++
Sbjct: 480 FEALYYFRHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALI 539

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           D+YVKCG    A + F    AKD++SW IMIAG+  HG G  A++ FN M + G  PDEV
Sbjct: 540 DLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEV 599

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+++L ACS  G+V EGW  F+ M  + +I P L+HYACMVDLLSR G L+EAY FI  
Sbjct: 600 TFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINE 659

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ PDA +WG+LL GCRIH  V+L E  A++V ELEP++ GY+VLL ++YA+A  W+++
Sbjct: 660 MPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKL 719

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            ++R+ +  +GL  + GCSW+E+KG V+ F+    SHP  ++I ++L+ +   MK  G  
Sbjct: 720 ARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCA 779

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P   ++    D++ K+   CGHSE+LA+AFG++N   G +I VTKN   C  CH + K +
Sbjct: 780 PVESHS--PEDKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMI 837

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSC 826
           S   RR+I++RDS + HHFKDG CSC
Sbjct: 838 SYIVRRDIIVRDSKQVHHFKDGSCSC 863


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 295/817 (36%), Positives = 460/817 (56%), Gaps = 57/817 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            +NA +G +   G    A+E+        +  D+ T+  +L+ C  ++ L  G ++H + 
Sbjct: 25  TWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLA 84

Query: 123 ----CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID-NGKVFIWNLLMHEYSKTG 177
               C+S + + +      LV ++  C D+   R++F+++     V  WN ++  YS  G
Sbjct: 85  IKYGCDSFVFVVN-----SLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNG 139

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCL-------------AVVGNSRRVKD----- 219
              E+L LF +M   G+  ++YTF+  L+               A +  S RV D     
Sbjct: 140 MCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVAN 199

Query: 220 --------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                         A  +F  L  +D+V+WN M++G+I NG+  + LE F ++ N     
Sbjct: 200 ALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKP 259

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  ++++++      G L+ G+ +HA+A+K  F   I   NTL+DMY+KC  +    R F
Sbjct: 260 DQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAF 319

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           + M  + ++SWT+  AGYA+   +  A+ L R +  EG++ D   I SIL AC     L 
Sbjct: 320 DLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLG 379

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
             K++H Y     +   + + N ++D+Y +CG +  A  +F  +  KD+VSW +MI    
Sbjct: 380 KIKEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYV 438

Query: 443 -------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  AL++F +M +   EPD VT+  IL A  SL+ L++G+EIHG+I+R G   + +
Sbjct: 439 HNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGS 498

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           ++N +VDMY +CG +  A  +F     ++LI WT MI+ YGMHG+G  A+  F  M+   
Sbjct: 499 ISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEK 558

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           I PD ++F+++LYACSHSGLV+EG  F  +M+ E  +EP  EHY C+VDLL R   L EA
Sbjct: 559 IIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEA 618

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           Y+ ++ M   P   +W +LL  CRIH   ++ E  AE + EL+ DN G YVL++NV+A  
Sbjct: 619 YQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAAN 678

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +W++V+++R ++   GL KNPGCSWIE+  K++ F++    HP   KI   L ++  ++
Sbjct: 679 GRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKL 738

Query: 735 KRE-GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           KRE GY  +T++ L N  E EK   L GHSE+LA+A+G+L    G  IRVTKNLRVCGDC
Sbjct: 739 KREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDC 798

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H     +S+   RE+++RD++RFHHFKDG CSC  FW
Sbjct: 799 HSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/493 (31%), Positives = 250/493 (50%), Gaps = 31/493 (6%)

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
           G    V DA  +FD++S+R + +WN M+ GY++NG A   LE+++EM +LG + D  T  
Sbjct: 3   GKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFP 62

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
            +L  C     L  G  +H  A+K      +   N+L+ +Y+KC D++GA ++F++M  R
Sbjct: 63  VLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVR 122

Query: 332 S-VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVSW S+I+ Y+  G+   A+ LF  M++ G+  + Y   + L AC     +++G  +
Sbjct: 123 NDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQI 182

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I ++     +YV+NAL+ MY + G M +A  +F  +  KDIV+WN+M+         
Sbjct: 183 HAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLY 242

Query: 443 --ALDLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
             AL+ F   LQN   +PD V++  I+ A   L  L  G+EIH Y +++G  ++  V N 
Sbjct: 243 SEALEFFYD-LQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNT 301

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           ++DMY KC  +      FD++  KDLISWT   AGY  +     A+     ++  G++ D
Sbjct: 302 LIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVD 361

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
                S+L AC     + +              +P L++   ++D+    G +  A R  
Sbjct: 362 ATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDYAVRIF 419

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE------LEPDNTGYYVLLANVYA 672
           E +    D   W S++  C +H+   LA K  E VF       LEPD    YV L ++ +
Sbjct: 420 ESIE-CKDVVSWTSMI-SCYVHN--GLANKALE-VFSSMKETGLEPD----YVTLVSILS 470

Query: 673 EAEKWEEVKKLRE 685
                  +KK +E
Sbjct: 471 AVCSLSTLKKGKE 483



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 184/373 (49%), Gaps = 45/373 (12%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MY KCG +  A  +F+KM ERS+ +W +M+ GY   G   GA+ ++R M   G+  D Y 
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
              +L AC     L  G ++H    +    S ++V N+L+ +YAKC  +  A  +F++M 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 431 VK-DIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGR 478
           V+ D+VSWN++I           AL LF  ML+     +  T A  L AC   + ++ G 
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           +IH  IL+ G   D  VANA+V MYV+ G +  A  +F  +  KD+++W  M+ G+  +G
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM---RYECNI---E 592
              +A+  F D++ A ++PD+VS IS++ A    G +  G           ++ NI    
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300

Query: 593 PKLEHYA---CMV------------DLLSRTGNLS------------EAYRFIEMMPVAP 625
             ++ YA   CM             DL+S T   +            E  R ++M  +  
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360

Query: 626 DATIWGSLLCGCR 638
           DAT+ GS+L  CR
Sbjct: 361 DATMIGSILLACR 373


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 293/783 (37%), Positives = 460/783 (58%), Gaps = 51/783 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL--GSKLVFMFVTCGDLKEGR 152
           D+ T+  +L+ C  ++ +  G ++H +I + G    D ++   + LV M+  C D+   R
Sbjct: 9   DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGY---DSIVFVANSLVSMYAKCNDILGAR 65

Query: 153 RVFNKI-DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL--- 208
           ++F+++ +   V  WN ++  YS  G   E+L LF++MQ  G+ A++YT    L+     
Sbjct: 66  KLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDS 125

Query: 209 ----------AVVGNSRRVKD-------------------AHKLFDELSDRDVVSWNCMI 239
                     A +  S +V D                   A ++FDEL ++D ++WN MI
Sbjct: 126 SFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMI 185

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           +G+  NG+  + L+ F  + +     D  +++++L+     G L+ G+ +HA+A+K    
Sbjct: 186 AGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLD 245

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
             +   NTL+DMYSKC  +  A  VF+KM  + ++SWT++IA YA+      A++L R +
Sbjct: 246 SNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKV 305

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             +G++ D   I S L AC+    L   K+VH Y  +  + S L + N ++D+YA CG++
Sbjct: 306 QTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNI 364

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPAC 468
             A  +F  +  KD+VSW +MI           AL +F  M + + EPD +T+  IL A 
Sbjct: 365 NYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAA 424

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           ASL+AL +G+EIHG+I R G   + +  N++VDMY  CG L  A  +F    +K L+ WT
Sbjct: 425 ASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWT 484

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI  YGMHG G  A+  F+ M    + PD ++F+++LYACSHSGL++EG R    M+ +
Sbjct: 485 TMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCK 544

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             +EP  EHYAC+VDLL R  +L EAY F++ M + P A +W + L  CRIH   KL E 
Sbjct: 545 YQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEI 604

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            A+ + +L+PD+ G YVL++NV+A + +W++V+++R ++   GLKKNPGCSWIE+  KV+
Sbjct: 605 AAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVH 664

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKRE-GYFPKTRYALINADEMEKEVALCGHSEKLA 767
            F+    SHP + KI   L ++  ++++E GY P+T+  L N  + EK   L GHSE+LA
Sbjct: 665 TFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLA 724

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
           +A+G+++   G  IR+TKNLRVC DCH   K +SK   RE+++RD++RFHHF+DG CSC 
Sbjct: 725 IAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCG 784

Query: 828 GFW 830
            FW
Sbjct: 785 DFW 787



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 215/461 (46%), Gaps = 47/461 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSI--LQLCADLKSLEDGKKVHSII 122
           ++N+ I  +   G   +A+ +    +K+ +   TY  +  LQ C D    + G ++H+ I
Sbjct: 79  SWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAI 138

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +S  V+D  V  + LV M V  G +    R+F+++D      WN ++  +++ G + E+
Sbjct: 139 LKSNQVLDVYV-ANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEA 197

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK-------------------- 222
           L  F  +Q   +  D  +   +L     +G     K+ H                     
Sbjct: 198 LQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDM 257

Query: 223 ------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                       +FD++ ++D++SW  +I+ Y  N    + L++ +++   G +VD   +
Sbjct: 258 YSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMI 317

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + L  C+    L   + VH + LK   S ++   N ++D+Y+ CG+++ A R+FE +  
Sbjct: 318 GSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKC 376

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVSWTSMI+ Y   G+ + A+ +F  M    +EPD   + SIL A A    L  GK++
Sbjct: 377 KDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEI 436

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--------- 441
           H +I            N+L+DMYA CGS+ +A  VF     K +V W TMI         
Sbjct: 437 HGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRG 496

Query: 442 -GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREI 480
             A++LF  M  Q   PD +T   +L AC+    +  G+ +
Sbjct: 497 KAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 195/415 (46%), Gaps = 38/415 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N+ I  F + G   +A++     + +  K D  +  SIL     L  L +GK++H+  
Sbjct: 180 TWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYA 239

Query: 123 CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            ++ +  D  + +G+ L+ M+  C  +     VF+K+ N  +  W  ++  Y++     E
Sbjct: 240 MKNWL--DSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTE 297

Query: 182 SLYLFKKMQSLGIAAD-----SYTFSCV-LKCLA-------------------------V 210
           +L L +K+Q+ G+  D     S   +C  L+CL+                         V
Sbjct: 298 ALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDV 357

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
             +   +  A ++F+ +  +DVVSW  MIS Y+ NG+A + L VF  M       D  T+
Sbjct: 358 YADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITL 417

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           V++LS  A+  AL  G+ +H F  +  F  E S  N+L+DMY+ CG L+ A +VF     
Sbjct: 418 VSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRS 477

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +S+V WT+MI  Y   G    A+ LF  M  + + PD     ++L+AC+  GL+  GK +
Sbjct: 478 KSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537

Query: 391 HDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +K +  ++        L+D+  +   + +A      M ++     W   +GA
Sbjct: 538 LETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGA 592


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 313/841 (37%), Positives = 462/841 (54%), Gaps = 105/841 (12%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
            +S+  S  D  +  ++   C   KSL   +  H  +   G+  D     + ++ M++T 
Sbjct: 40  FFSTASSTTDLTS--TLFHQC---KSLASAELTHQQLLVQGLPHDP----THIISMYLTF 90

Query: 146 GDLKEGRRVFNKI--DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
               +   V  ++   +  VF WN L+      G  ++ L L+++MQ LG   D YTF  
Sbjct: 91  NSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPF 150

Query: 204 VLKC--------------------------------LAVVGNSRRVKDAHKLFDELSDR- 230
           VLK                                 +++ G     ++A ++FDE+ +R 
Sbjct: 151 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 210

Query: 231 --DVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGR 287
             D+VSWN +++ Y+  G + + +++F+ M  +LG   D  ++V VL  CA+ GA   G+
Sbjct: 211 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 270

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            VH +AL++   +++   N ++DMY+KCG ++ A +VFE+M  + VVSW +M+ GY++ G
Sbjct: 271 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 330

Query: 348 VFDGAIRLF-----------------------------------RGMVREGIEPDVYAIT 372
            FD A+ LF                                   R M+  G EP+V  + 
Sbjct: 331 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLV 390

Query: 373 SILHACACDGLLEIGKDVHDY-------IKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           S+L  CA  G L  GK+ H +       + END    L V NAL+DMY+KC S   A ++
Sbjct: 391 SLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 450

Query: 426 FNQMPVKD--IVSWNTMIG----------ALDLFVAMLQ--NF-EPDGVTMACILPACAS 470
           F+ +P KD  +V+W  +IG          AL+LF  MLQ  NF  P+  T++C L ACA 
Sbjct: 451 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 510

Query: 471 LAALERGREIHGYILRHGI-SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           L AL  GR+IH Y+LR+   SA   VAN ++DMY K G +  AR +FD +  ++ +SWT 
Sbjct: 511 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 570

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           ++ GYGMHG G +A+  F +M++  + PD V+F+ VLYACSHSG+VD+G  +FN M  + 
Sbjct: 571 LMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 630

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            + P  EHYACMVDLLSR G L EA   I  MP+ P   +W +LL  CR++  V+L E  
Sbjct: 631 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYA 690

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           A  + ELE  N G Y LL+N+YA A  W++V ++R  +   G+KK PGCSW++ +     
Sbjct: 691 ANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTAT 750

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F AG  SHP +++I  LL+ L   +K  GY P  R+AL + D+ EK   L  HSEKLA+A
Sbjct: 751 FFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALA 810

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           +GIL    G  IR+TKNLR CGDCH    ++S     EI++RDS+RFHHFK+G CSCRG+
Sbjct: 811 YGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGY 870

Query: 830 W 830
           W
Sbjct: 871 W 871



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 243/485 (50%), Gaps = 62/485 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N+ +  + + G+  +AM++     +    + D  +  ++L  CA + +   GK+VH  
Sbjct: 216 SWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGY 275

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
              SG+  +D  +G+ +V M+  CG ++E  +VF ++    V  WN ++  YS+ G F +
Sbjct: 276 ALRSGL-FEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDD 334

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
           +L LF+K++                                  +E  + +VV+W+ +I+G
Sbjct: 335 ALGLFEKIR----------------------------------EEKIELNVVTWSAVIAG 360

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS-- 299
           Y   G+  + L+VF++ML  G   ++ T+V++LSGCA+ G L+ G+  H  A+K   +  
Sbjct: 361 YAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLD 420

Query: 300 -----KEISFNNTLLDMYSKCGDLDGAIRVFEKMG--ERSVVSWTSMIAGYAREGVFDGA 352
                 ++   N L+DMYSKC     A  +F+ +   +RSVV+WT +I G A+ G  + A
Sbjct: 421 ENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEA 480

Query: 353 IRLFRGMVREG--IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS-LYVSNAL 409
           + LF  M++    + P+ + I+  L ACA  G L  G+ +H Y+  N  +S+ L+V+N L
Sbjct: 481 LELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCL 540

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDG 458
           +DMY+K G +  A  VF+ M  ++ VSW +++           AL +F  M +    PDG
Sbjct: 541 IDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDG 600

Query: 459 VTMACILPACASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
           VT   +L AC+    +++G    +G     G+         +VD+  + G L  A  L  
Sbjct: 601 VTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIR 660

Query: 518 MIPAK 522
            +P K
Sbjct: 661 GMPMK 665


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 303/817 (37%), Positives = 451/817 (55%), Gaps = 54/817 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL-----YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVH 119
           ++NA +G +   G+  +AM V       ++  S  D  T  S+L+ C        G +VH
Sbjct: 128 SWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVH 187

Query: 120 SIICESGIVIDDGVL-GSKLVFMFVTCGDLKEGRRVFN--KIDNGKVFIWNLLMHEYSKT 176
            +  + G+  D   L  + L+ M+  CG L    RVF   + D   V  WN ++    + 
Sbjct: 188 GLAVKVGL--DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQN 245

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------------------------ 212
           G   E+L LF+ MQS G   +SYT   VL+  A +G                        
Sbjct: 246 GRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCN 305

Query: 213 -------NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                     RV  A ++F +++++D +SWN M+S Y+ N    + ++ F EML  GF  
Sbjct: 306 ALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQP 365

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D A +V++ S   +   L  GR  HA+A+K     ++   NTL+DMY KCG ++ + +VF
Sbjct: 366 DHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVF 425

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           E MG R  +SWT+++A +A+      A+ +   + +EGI  D   I SIL  C     + 
Sbjct: 426 ESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSIS 485

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---- 441
           + K VH Y   N +   L + N L+D+Y +CG    + ++F ++  KDIVSW +MI    
Sbjct: 486 LLKQVHCYAIRNGLLD-LILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCT 544

Query: 442 ------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                 GA+ LF  M + N +PD V +  IL A A L++L +G+++HG+++R     +  
Sbjct: 545 NNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGP 604

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V +++VDMY  CG +  A  +F+    KD++ WT MI   GMHG G  AI  F  M Q G
Sbjct: 605 VVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTG 664

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           + PD VSF+++LYACSHS LV+EG  + ++M  +  ++P  EHYAC+VD+L R+G   EA
Sbjct: 665 LTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEA 724

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           Y FI+ MP+ P + +W +LL  CR+H    LA   A  + ELEPDN G Y+L++NV+AE 
Sbjct: 725 YEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEM 784

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            KW   K+ R +++ RGL+KNP CSWIEI   ++ F +G   H  ++ I   L  +   +
Sbjct: 785 GKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEML 844

Query: 735 KRE-GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           +RE GY   TR+ L +  E EK   L  HSE++A+AFG+++   G  IR+ KNLRVCGDC
Sbjct: 845 RREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDC 904

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           HE  K +SK   R+IV+RD+NRFHHF  G CSC  FW
Sbjct: 905 HEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941



 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 191/654 (29%), Positives = 328/654 (50%), Gaps = 60/654 (9%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           +A + R C+ G+L +A+  L  + ++    + Y  +L L A  ++  +G++VH+    +G
Sbjct: 30  SASLKRLCKEGDLRQALRQL--TTRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTG 87

Query: 127 IV--IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
            +   DDG L +KLVFM+  CG + + RR+FN +    VF WN L+  Y  +G+  E++ 
Sbjct: 88  SLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMR 147

Query: 185 LFKKMQ---SLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------- 221
           ++  M+   + G A D  T + VLK     G+ R   + H                    
Sbjct: 148 VYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIG 207

Query: 222 ------------KLFDELSD--RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                       ++F+ L    RDV SWN ++SG + NG   + L +F+ M + GF ++ 
Sbjct: 208 MYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNS 267

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T V VL  CA  G L  GR +HA  LK C S+     N LL MY+K G +D A+RVF +
Sbjct: 268 YTSVAVLQVCAELGLLSLGRELHAALLK-CGSELNIQCNALLVMYAKYGRVDSALRVFGQ 326

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           + E+  +SW SM++ Y +   +  AI  F  M++ G +PD   + S+  A      L  G
Sbjct: 327 IAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNG 386

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
           ++ H Y  +  + + L V N LMDMY KCGS+  +  VF  M ++D +SW T++      
Sbjct: 387 REFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQS 446

Query: 443 -----ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL++ + +  +    D + +  IL  C  L ++   +++H Y +R+G+  D  + 
Sbjct: 447 SRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILE 505

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           N ++D+Y +CG    + +LF  +  KD++SWT MI     +G    A+  F +M++A I+
Sbjct: 506 NRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQ 565

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           PD V+ +S+L A +    + +G +    ++R    IE  +   + +VD+ S  G+++ A 
Sbjct: 566 PDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPV--VSSLVDMYSGCGSMNYAI 623

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL 667
           R  E      D  +W +++    +H   K A  + + + +  L PD+  +  LL
Sbjct: 624 RVFERAK-CKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALL 676


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 273/749 (36%), Positives = 430/749 (57%), Gaps = 46/749 (6%)

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
           V D     ++L    ++  +++  R VF++I    V +WN+++  Y+ +G F++S+YL+ 
Sbjct: 37  VSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYL 96

Query: 188 KMQSLGIAADSYTFSCVLKC--------------------------------LAVVGNSR 215
            M  LG+   ++TF  +LK                                 L +     
Sbjct: 97  HMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCG 156

Query: 216 RVKDAHKLFDELS--DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
            +  A  LF+ +S  DRD+V+WN MI+ +  + +  + +    +M   G   + +T+V++
Sbjct: 157 HLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSI 216

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L       AL  G+A+HA+ ++  F   +     LLDMY+KC  L  A ++F  + +++ 
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKND 276

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMV-REGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           V W++MI GY        A+ L+  M+   G+ P    + ++L ACA    L+ GK +H 
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHC 336

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           ++ ++ M     V N+L+ MYAKCG M +A    ++M  KD VS++ +I           
Sbjct: 337 HMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEK 396

Query: 443 ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           AL +F  M  +   P   TM  +LPAC+ LAAL+ G   HGY +  G + D ++ NAI+D
Sbjct: 397 ALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIID 456

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KCG + ++R +FD +  +D+ISW  MI GYG+HG   +A++ F +++  G++PD+V+
Sbjct: 457 MYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVT 516

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
            I+VL ACSHSGLV EG  +F+ M    NI+P++ HY CMVDLL+R GNL EAY FI+ M
Sbjct: 517 LIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRM 576

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P  P+  IWG+LL  CR H  +++ E+V++ +  L P+ TG +VL++N+Y+   +W++  
Sbjct: 577 PFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAA 636

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
            +R      G KK+PGCSW+EI G +++F+ G  SHP +  I   L+ L ++MK+ GY  
Sbjct: 637 YIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRA 696

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            + + L + +E EKE  L  HSEK+A+AFGILN      I VTKNLR+C DCH   KF++
Sbjct: 697 DSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFIT 756

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               REI +RD++RFHHFKDG C+C+ FW
Sbjct: 757 LLTEREITVRDASRFHHFKDGICNCQDFW 785



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 207/427 (48%), Gaps = 47/427 (11%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+  +L+ C+ L++L+ G+ +H+     G+ +D  V  + L+ M+  CG L + + +FN 
Sbjct: 109 TFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYV-STALLHMYAKCGHLYQAQTLFNS 167

Query: 158 IDNGK--VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR 215
           I +    +  WN ++  +S      ++++   +MQ  G+  +S T   +L  +       
Sbjct: 168 ISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALH 227

Query: 216 RVKDAH--------------------------------KLFDELSDRDVVSWNCMISGYI 243
           + K  H                                K+F+ ++ ++ V W+ MI GY+
Sbjct: 228 QGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYV 287

Query: 244 ANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
            +      L ++ +ML + G N   AT+ T+L  CA    L  G+ +H   +K+    + 
Sbjct: 288 LHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDT 347

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
           +  N+L+ MY+KCG +D A+   ++M  +  VS++++I+G  + G  + A+ +FR M   
Sbjct: 348 TVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSS 407

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           GI P +  + ++L AC+    L+ G   H Y       +   + NA++DMY+KCG +  +
Sbjct: 408 GIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITIS 467

Query: 423 ESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASL 471
             +F++M  +DI+SWNTMI           AL LF  +     +PD VT+  +L AC+  
Sbjct: 468 REIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHS 527

Query: 472 AALERGR 478
             +  G+
Sbjct: 528 GLVTEGK 534



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 186/384 (48%), Gaps = 36/384 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T  SIL       +L  GK +H+    +    D+ VL + L+ M+  C  L   R++
Sbjct: 209 NSSTLVSILPTIGQANALHQGKAIHAYYIRN-FFFDNVVLQTALLDMYAKCHLLFYARKI 267

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL-GIAADSYTFSCVLKCLAVVGN 213
           FN ++      W+ ++  Y    +  ++L L+  M  + G+     T + +L+  A + +
Sbjct: 268 FNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTD 327

Query: 214 SRRVKDAH--------------------------------KLFDELSDRDVVSWNCMISG 241
            +R K  H                                   DE+  +D VS++ +ISG
Sbjct: 328 LKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISG 387

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
            + NG AEK L +F++M + G    L TM+ +L  C++  AL  G   H + +   F+ +
Sbjct: 388 CVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTND 447

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
            S  N ++DMYSKCG +  +  +F++M  R ++SW +MI GY   G+   A+ LF+ +  
Sbjct: 448 TSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQA 507

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMA 420
            G++PD   + ++L AC+  GL+  GK     + +N +++  +     ++D+ A+ G++ 
Sbjct: 508 LGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLD 567

Query: 421 DAESVFNQMP-VKDIVSWNTMIGA 443
           +A +   +MP V ++  W  ++ A
Sbjct: 568 EAYTFIQRMPFVPNVRIWGALLAA 591



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 3/145 (2%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDT--KTYCSILQLCADLKSLEDGKKVHS 120
           T +Y+A I    + G  EKA+ +    + S I    +T  ++L  C+ L +L+ G   H 
Sbjct: 378 TVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHG 437

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
                G   D  +  + ++ M+  CG +   R +F+++ N  +  WN ++  Y   G   
Sbjct: 438 YTVVRGFTNDTSICNA-IIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCV 496

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVL 205
           E+L LF+++Q+LG+  D  T   VL
Sbjct: 497 EALSLFQELQALGLKPDDVTLIAVL 521



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 5/170 (2%)

Query: 475 ERGREIHGYILR---HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           +R R+I  +      H +S     A  +   ++    + LAR +FD IP   ++ W +MI
Sbjct: 20  QRHRQIRSFSPHPHPHRVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMI 79

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
             Y   G    +I  +  M Q G+ P   +F  +L ACS    +  G R  +   +   +
Sbjct: 80  RTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLG-RLIHTHAHILGL 138

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYR-FIEMMPVAPDATIWGSLLCGCRIH 640
              L     ++ + ++ G+L +A   F  +     D   W +++     H
Sbjct: 139 SMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFH 188


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 299/805 (37%), Positives = 455/805 (56%), Gaps = 53/805 (6%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           +A +   C  G L +A+ +L SS +   D   Y ++ +LC   ++++ G +     C   
Sbjct: 68  SAALRALCSHGQLAQALWLLESSPEPP-DEGAYVALFRLCEWRRAVDAGMRA----CARA 122

Query: 127 IVIDDGV---LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
                     LG+ ++ M V  G++    RVF K+    VF WN+++  Y K G  +E+L
Sbjct: 123 DAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEAL 182

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH---------------------- 221
            L+ +M   G+  D YTF CVL+    + + R  ++ H                      
Sbjct: 183 DLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMY 242

Query: 222 ----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                     K+FD ++  D +SWN MI+G+  N   E GLE+F  ML      +L T+ 
Sbjct: 243 AKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTIT 302

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +V         + F + +H FA+K  F+ +++F N+L+ MY+  G +  A ++F +M  +
Sbjct: 303 SVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK 362

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             +SWT+MI+GY + G  D A+ ++  M    + PD   I S L ACAC G L++G  +H
Sbjct: 363 DAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLH 422

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
           +  +       + V+NAL++MYAK   +  A  VF  M  KD+VSW++MI          
Sbjct: 423 ELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSF 482

Query: 443 -ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
            AL  F  ML + +P+ VT    L ACA+  AL  G+EIH Y+LR GI ++  V NA++D
Sbjct: 483 EALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLD 542

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           +YVKCG    A + F +   KD++SW IM++G+  HG G  A++ FN M + G  PDEV+
Sbjct: 543 LYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVT 602

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           F+++L ACS +G+V +GW  F+MM  + +I P L+HYACMVDLLSR G L+EAY  I  M
Sbjct: 603 FVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRM 662

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P+ PDA +WG+LL GCRIH  V+L E  A+ + ELEP++  Y+VLL ++Y +A KW +V 
Sbjct: 663 PIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVA 722

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           ++R+ +  +GL+++ GCSW+E+KG  + F+    SHP  K+I  +L  +   MK  G+ P
Sbjct: 723 RVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAP 782

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
                 +   E+ ++  LCGHSE+LA+AFG++N   G TI VTKN   C  CH + K +S
Sbjct: 783 VES---LEDKEVSEDDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAIS 839

Query: 802 KTARREIVLRDSNRFHHFKDGRCSC 826
           +  RREI +RD+ + H FKDG CSC
Sbjct: 840 EIVRREITVRDTKQLHCFKDGDCSC 864



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 247/520 (47%), Gaps = 49/520 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +G + +VG LE+A+++ Y       + D  T+  +L+ C  +     G++VH+ +
Sbjct: 164 SWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHV 223

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G   +  VL + LV M+  CGD+   R+VF+ +       WN ++  + +    +  
Sbjct: 224 LRFGFGDEVDVLNA-LVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAG 282

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSR------------------------ 215
           L LF  M    +  +  T + V      L+ VG ++                        
Sbjct: 283 LELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQM 342

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R+ DA K+F  +  +D +SW  MISGY  NG  +K LEV+  M     + D  T+
Sbjct: 343 YTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTI 402

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + L+ CA  G L  G  +H  A    F + +   N LL+MY+K   +D AI VF+ M E
Sbjct: 403 ASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAE 462

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVSW+SMIAG+        A+  FR M+   ++P+     + L ACA  G L  GK++
Sbjct: 463 KDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEI 521

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H Y+    + S  YV NAL+D+Y KCG  + A + F+    KD+VSWN M+         
Sbjct: 522 HAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLG 581

Query: 443 --ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREI-HGYILRHGISADRNVANA 498
             AL LF  M++  E PD VT   +L AC+    + +G E+ H    +  I  +      
Sbjct: 582 DIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYAC 641

Query: 499 IVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           +VD+  + G L  A +L + +P K D   W  ++ G  +H
Sbjct: 642 MVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIH 681


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 301/813 (37%), Positives = 442/813 (54%), Gaps = 49/813 (6%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            ++   IG     G  ++A  +    ++     ++ TY SIL   A   +LE  K+VHS  
Sbjct: 287  SWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHA 346

Query: 123  CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              +G+ +D  V G+ LV M+   G + + R VF+ +    +F W +++   ++ G  +E+
Sbjct: 347  VNAGLALDLRV-GNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEA 405

Query: 183  LYLFKKMQSLGIAADSYTFSCVLKCLAV--------------------------VGNSR- 215
              LF +MQ  G   +  T+  +L   A+                          +GN+  
Sbjct: 406  FSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALI 465

Query: 216  -------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                    + DA  +FD + DRDV+SWN M+ G   NG   +   VF +M   G   D  
Sbjct: 466  HMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDST 525

Query: 269  TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            T +++L+   +  AL +   VH  A++     +    +  + MY +CG +D A  +F+K+
Sbjct: 526  TYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKL 585

Query: 329  GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
              R V +W +MI G A++     A+ LF  M REG  PD     +IL A   +  LE  K
Sbjct: 586  SVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVK 645

Query: 389  DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---- 444
            +VH +  +  +   L V NAL+  Y+KCG++  A+ VF+ M  +++ +W  MIG L    
Sbjct: 646  EVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHG 704

Query: 445  ---DLFVAMLQNFE----PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
               D F   LQ       PD  T   IL ACAS  ALE  +E+H + +  G+ +D  V N
Sbjct: 705  CGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGN 764

Query: 498  AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
            A+V MY KCG +  ARS+FD +  +D+ SWT+MI G   HG G +A+  F  M+  G +P
Sbjct: 765  ALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKP 824

Query: 558  DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
            +  S+++VL ACSH+GLVDEG R F  M  +  IEP +EHY CMVDLL R G L EA  F
Sbjct: 825  NGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELF 884

Query: 618  IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
            I  MP+ PD   WG+LL  C  +  +++AE  A+   +L+P +   YVLL+N+YA   KW
Sbjct: 885  ILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKW 944

Query: 678  EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
            E+   +R  + R+G++K PG SWIE+  +++ FV G +SHP +K+I + L  L   +K +
Sbjct: 945  EQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAK 1004

Query: 738  GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
            GY P TR  L N D+  KE ALC HSEKLA+ +G+++  +   IRV KNLRVC DCH   
Sbjct: 1005 GYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTAT 1064

Query: 798  KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KF+SK   REIV RD+ RFHHFKDG CSC  +W
Sbjct: 1065 KFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097



 Score =  289 bits (739), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 189/622 (30%), Positives = 306/622 (49%), Gaps = 51/622 (8%)

Query: 66  YNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +   IG + E G+ E AM V      E  + +  TY SIL+ C    +L+ GKK+H+ I 
Sbjct: 187 WTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHII 246

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +SG   D  V  + LV M+V CG +++ + +F+K+    V  W +++   +  G  +E+ 
Sbjct: 247 QSGFQSDVRV-ETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAF 305

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK--------------------- 222
           +LF +MQ  G   +SYT+  +L   A  G    VK+ H                      
Sbjct: 306 HLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMY 365

Query: 223 -----------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                      +FD +++RD+ SW  MI G   +G  ++   +F +M   G   +L T +
Sbjct: 366 AKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYL 425

Query: 272 TVL--SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           ++L  S  A+  AL + + VH  A +A F  ++   N L+ MY+KCG +D A  VF+ M 
Sbjct: 426 SILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMC 485

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           +R V+SW +M+ G A+ G    A  +F  M +EG+ PD     S+L+       LE   +
Sbjct: 486 DRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNE 545

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           VH +  E  + S   V +A + MY +CGS+ DA  +F+++ V+ + +WN MIG       
Sbjct: 546 VHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRC 605

Query: 443 ---ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              AL LF+ M  + F PD  T   IL A     ALE  +E+H +    G+  D  V NA
Sbjct: 606 GREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNA 664

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +V  Y KCG +  A+ +FD +  +++ +WT+MI G   HG G DA + F  M + GI PD
Sbjct: 665 LVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPD 724

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
             +++S+L AC+ +G ++      N       +   L     +V + ++ G++ +A    
Sbjct: 725 ATTYVSILSACASTGALEWVKEVHNHA-VSAGLVSDLRVGNALVHMYAKCGSIDDARSVF 783

Query: 619 EMMPVAPDATIWGSLLCGCRIH 640
           + M V  D   W  ++ G   H
Sbjct: 784 DDM-VERDVFSWTVMIGGLAQH 804



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 204/733 (27%), Positives = 351/733 (47%), Gaps = 109/733 (14%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           ID+ +Y +ILQ C   + +   K+VH  I +SG+   +  + +KL+ +++ CG L+  R+
Sbjct: 116 IDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGME-QNLYVANKLLRVYIRCGRLQCARQ 174

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VF+K+    ++IW  ++  Y++ G+ ++++ ++ KM+      +  T+  +LK      N
Sbjct: 175 VFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVN 234

Query: 214 SR--------------------------------RVKDAHKLFDELSDRDVVSWNCMISG 241
            +                                 ++DA  +FD++ +R+V+SW  MI G
Sbjct: 235 LKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGG 294

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
               G  ++   +F +M   GF  +  T V++L+  A+ GAL + + VH+ A+ A  + +
Sbjct: 295 LAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALD 354

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +   N L+ MY+K G +D A  VF+ M ER + SWT MI G A+ G    A  LF  M R
Sbjct: 355 LRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQR 414

Query: 362 EGIEPDVYAITSILHAC--ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
            G  P++    SIL+A   A    LE  K VH + +E    S L + NAL+ MYAKCGS+
Sbjct: 415 NGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSI 474

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPAC 468
            DA  VF+ M  +D++SWN M+G          A  +F+ M Q    PD  T   +L   
Sbjct: 475 DDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTH 534

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
            S  ALE   E+H + +  G+ +D  V +A + MY++CG +  AR LFD +  + + +W 
Sbjct: 535 GSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWN 594

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA----------------CSHS 572
            MI G      G +A++ F  M++ G  PD  +FI++L A                 + +
Sbjct: 595 AMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDA 654

Query: 573 GLVDEGWRFFNMMRY---ECN------------IEPKLEHYACMVDLLSRTGNLSEAY-R 616
           GLVD   R  N + +   +C             +E  +  +  M+  L++ G   +A+  
Sbjct: 655 GLVD--LRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSH 712

Query: 617 FIEMMP--VAPDATIWGSLLCGCRIHHEVKLAEKVAEH------VFELEPDNTGYYVLLA 668
           F++M+   + PDAT + S+L  C     ++  ++V  H      V +L   N      L 
Sbjct: 713 FLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNA-----LV 767

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           ++YA+    ++ + + + +  R +      SW  + G +           H + +E+L  
Sbjct: 768 HMYAKCGSIDDARSVFDDMVERDV-----FSWTVMIGGLA---------QHGRGLEAL-- 811

Query: 729 RLRLEMKREGYFP 741
              ++MK EG+ P
Sbjct: 812 DFFVKMKSEGFKP 824



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 160/582 (27%), Positives = 278/582 (47%), Gaps = 61/582 (10%)

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
            A+  + + K  +  G  +D  + V +L  C     ++  + VH   +K+   + +   N
Sbjct: 98  TAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVAN 157

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            LL +Y +CG L  A +VF+K+ ++++  WT+MI GYA  G  + A+R++  M +E  +P
Sbjct: 158 KLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQP 217

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           +     SIL AC C   L+ GK +H +I ++  QS + V  AL++MY KCGS+ DA+ +F
Sbjct: 218 NEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIF 277

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALE 475
           ++M  ++++SW  MIG          A  LF+ M  + F P+  T   IL A AS  ALE
Sbjct: 278 DKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
             +E+H + +  G++ D  V NA+V MY K G +  AR +FD +  +D+ SWT+MI G  
Sbjct: 338 WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLA 397

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW-RFFNMMRYECNIEPK 594
            HG G +A + F  M++ G  P+  +++S+L A + +      W +  +    E      
Sbjct: 398 QHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISD 457

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH-- 652
           L     ++ + ++ G++ +A    + M    D   W +++ G        LA+    H  
Sbjct: 458 LRIGNALIHMYAKCGSIDDARLVFDGM-CDRDVISWNAMMGG--------LAQNGCGHEA 508

Query: 653 --VF------ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN--PGCSWIE 702
             VF       L PD+T Y  LL N +   +  E V ++ +     GL  +   G ++I 
Sbjct: 509 FTVFLQMQQEGLVPDSTTYLSLL-NTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIH 567

Query: 703 IK---GKV------------------NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           +    G +                  N  + G +     ++  SL     L+M+REG+ P
Sbjct: 568 MYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLF----LQMQREGFIP 623

Query: 742 --KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
              T   +++A+  E+ +         A   G+++L  G  +
Sbjct: 624 DATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNAL 665



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 169/413 (40%), Gaps = 72/413 (17%)

Query: 57  KTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLED 114
           K  V     +NA IG   +     +A+ +    ++     D  T+ +IL    D ++LE 
Sbjct: 584 KLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEW 643

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
            K+VHS   ++G+V  D  +G+ LV  +  CG++K  ++VF+ +    V  W +++   +
Sbjct: 644 VKEVHSHATDAGLV--DLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLA 701

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK---------------- 218
           + G   ++   F +M   GI  D+ T+  +L   A  G    VK                
Sbjct: 702 QHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLR 761

Query: 219 ----------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                           DA  +FD++ +RDV SW  MI G   +G   + L+ F +M + G
Sbjct: 762 VGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEG 821

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
           F  +  + V VL+ C++ G +  GR                     L M    G      
Sbjct: 822 FKPNGYSYVAVLTACSHAGLVDEGR------------------RQFLSMTQDYGI----- 858

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
                  E ++  +T M+    R G+ + A  LF  ++   IEPD     ++L AC   G
Sbjct: 859 -------EPTMEHYTCMVDLLGRAGLLEEA-ELF--ILNMPIEPDDAPWGALLGACVTYG 908

Query: 383 LLEIGK-DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
            LE+ +    + +K     +S YV   L ++YA  G       V + M  K I
Sbjct: 909 NLEMAEFAAKERLKLKPKSASTYV--LLSNIYAATGKWEQKLLVRSMMQRKGI 959


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/723 (38%), Positives = 427/723 (59%), Gaps = 32/723 (4%)

Query: 120 SIICESGIVIDD-GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
           SI+C+ G + +  G+L + ++          +G RV++ +  G       L+ E ++  +
Sbjct: 69  SILCKQGRLKEALGILNTMIL----------QGTRVYSDVFRG-------LLQECARLRS 111

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
            ++   +   +   GI  + Y  + +L   A  G+   + DA ++FD + DR++VSW  M
Sbjct: 112 LEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGS---LTDARRVFDGIRDRNIVSWTAM 168

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I  ++A     +  + ++ M   G   D  T V++L+   N   L  G+ VH    KA  
Sbjct: 169 IEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGL 228

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             E     +L+ MY+KCGD+  A  +F+K+ E++VV+WT +IAGYA++G  D A+ L   
Sbjct: 229 ELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEK 288

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M +  + P+    TSIL  C     LE GK VH YI ++     ++V NAL+ MY KCG 
Sbjct: 289 MQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGG 348

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPA 467
           + +A  +F  +P +D+V+W  M+           A+DLF  M Q   +PD +T    L +
Sbjct: 349 LKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTS 408

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C+S A L+ G+ IH  ++  G S D  + +A+V MY KCG +  AR +F+ +  +++++W
Sbjct: 409 CSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAW 468

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
           T MI G   HG   +A+  F  M++ GI+PD+V+F SVL AC+H GLV+EG + F  M  
Sbjct: 469 TAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYL 528

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
           +  I+P +EHY+C VDLL R G+L EA   I  MP  P  ++WG+LL  CRIH +V+  E
Sbjct: 529 DYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGE 588

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
           + AE+V +L+PD+ G YV L+N+YA A ++E+ +K+R+ + +R + K PG SWIE+ GKV
Sbjct: 589 RAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKV 648

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
           ++F     SHP AK+I + L +L  ++K +GY P TR+ L + DE +K   LC HSE+LA
Sbjct: 649 HVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLA 708

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
           + +G++  P G  IR+ KNLRVCGDCH  +KF+SK   REI+ RD++RFHHF DG CSC 
Sbjct: 709 ITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCG 768

Query: 828 GFW 830
            FW
Sbjct: 769 DFW 771



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/518 (29%), Positives = 259/518 (50%), Gaps = 48/518 (9%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           + ++   C+ G L++A+ +L +   + +++ +  +  +LQ CA L+SLE G++VH+ I +
Sbjct: 65  SGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILK 124

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
           SGI   +  L + L+ M+  CG L + RRVF+ I +  +  W  ++  +       E+  
Sbjct: 125 SGIQ-PNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYK 183

Query: 185 LFKKMQSLGIAADSYTFSCVLKCL-----------------------------AVVGNSR 215
            ++ M+  G   D  TF  +L                                ++VG   
Sbjct: 184 CYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYA 243

Query: 216 RVKD---AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           +  D   A  +FD+L +++VV+W  +I+GY   G  +  LE+ ++M       +  T  +
Sbjct: 244 KCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTS 303

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L GC    AL  G+ VH + +++ + +EI   N L+ MY KCG L  A ++F  +  R 
Sbjct: 304 ILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRD 363

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           VV+WT+M+ GYA+ G  D AI LFR M ++GI+PD    TS L +C+    L+ GK +H 
Sbjct: 364 VVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQ 423

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
            +        +Y+ +AL+ MYAKCGSM DA  VFNQM  +++V+W  MI           
Sbjct: 424 QLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCRE 483

Query: 443 ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIV 500
           AL+ F  M  Q  +PD VT   +L AC  +  +E GR+      L +GI       +  V
Sbjct: 484 ALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFV 543

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
           D+  + G L  A ++   +P +   S W  +++   +H
Sbjct: 544 DLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIH 581



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 225/467 (48%), Gaps = 60/467 (12%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T+ S+L    + + L+ G+KVH  I ++G+ ++  V G+ LV M+  CGD+ + +
Sbjct: 194 KPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRV-GTSLVGMYAKCGDISKAQ 252

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CLAVV 211
            +F+K+    V  W LL+  Y++ G    +L L +KMQ   +A +  T++ +L+ C   +
Sbjct: 253 VIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPL 312

Query: 212 ---------------GNSRRV----------------KDAHKLFDELSDRDVVSWNCMIS 240
                          G  R +                K+A KLF +L  RDVV+W  M++
Sbjct: 313 ALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVT 372

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY   G  ++ +++F+ M   G   D  T  + L+ C++   L  G+++H   + A +S 
Sbjct: 373 GYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSL 432

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++   + L+ MY+KCG +D A  VF +M ER+VV+WT+MI G A+ G    A+  F  M 
Sbjct: 433 DVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMK 492

Query: 361 REGIEPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           ++GI+PD    TS+L AC   GL+E G K       +  ++  +   +  +D+  + G +
Sbjct: 493 KQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL 552

Query: 420 ADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGRE 479
            +AE+V   MP                       F+P       +L AC   + +ERG  
Sbjct: 553 EEAENVILTMP-----------------------FQPGPSVWGALLSACRIHSDVERGER 589

Query: 480 IHGYILRHGISADRNVAN-AIVDMYVKCGVLVLARSLFDMIPAKDLI 525
               +L+  +  D + A  A+ ++Y   G    A  +  ++  +D++
Sbjct: 590 AAENVLK--LDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVV 634



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 179/419 (42%), Gaps = 78/419 (18%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I  + + G ++ A+E+L   +++++  +  TY SILQ C    +LE GKKVH  I +SG 
Sbjct: 270 IAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGY 329

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
             +  V+ + L+ M+  CG LKE R++F  + +  V  W  ++  Y++ G   E++ LF+
Sbjct: 330 GREIWVVNA-LITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFR 388

Query: 188 KMQSLGIAADSYTFSCVL----------------KCLAVVGNSRRV-------------- 217
           +MQ  GI  D  TF+  L                + L   G S  V              
Sbjct: 389 RMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCG 448

Query: 218 --KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
              DA  +F+++S+R+VV+W  MI+G   +G   + LE F++M   G   D  T  +VLS
Sbjct: 449 SMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLS 508

Query: 276 GCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            C + G +  GR    +  L       +   +  +D+  + G L+ A  V   M      
Sbjct: 509 ACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTM------ 562

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KDVHDY 393
                                         +P      ++L AC     +E G +   + 
Sbjct: 563 ----------------------------PFQPGPSVWGALLSACRIHSDVERGERAAENV 594

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV-----SWNTMIGALDLF 447
           +K +      YV  AL ++YA  G   DAE V   M  +D+V     SW  + G + +F
Sbjct: 595 LKLDPDDDGAYV--ALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVF 651


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 291/797 (36%), Positives = 446/797 (55%), Gaps = 59/797 (7%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D   + ++L+  ADL+ ++ GK++H+ + + G  +D   + + LV ++  CGD     
Sbjct: 90  KPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY 149

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKC---- 207
           +VF++I       WN L+        ++ +L  F+ M    +   S+T  S  L C    
Sbjct: 150 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFP 209

Query: 208 -----------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
                                        +A+ G   ++  +  L      RD+V+WN +
Sbjct: 210 MPEGLLMGKQVHAYGLRKGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTV 269

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           +S    N    + LE  +EM+  G   D  T+ +VL  C++   L  G+ +HA+ALK   
Sbjct: 270 LSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGS 329

Query: 299 SKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
             E SF  + L+DMY  C  +    RVF+ M +R +  W +MI GYA+    + A+ LF 
Sbjct: 330 LDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFI 389

Query: 358 GMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
            M    G+  +   +  ++ AC   G     + +H ++ +  +    +V NALMDMY++ 
Sbjct: 390 EMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRL 449

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIGALD---------LFVAMLQNFE------------ 455
           G +  A+ +F +M  +D+V+WNT+I             L +  +Q  E            
Sbjct: 450 GKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSL 509

Query: 456 -PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            P+ +T+  ILP+CA+L+AL +G+EIH Y +++ ++ D  V +A+VDMY KCG L ++R 
Sbjct: 510 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 569

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +FD IP +++I+W +++  YGMHG   DAI     M   G++P+EV+FISV  ACSHSG+
Sbjct: 570 VFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGM 629

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD-ATIWGSL 633
           V+EG + F  M+ +  +EP  +HYAC+VDLL R G + EAY+ I ++P   D A  W SL
Sbjct: 630 VNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSL 689

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
           L  CRIH+ +++ E  A+++ +LEP+   +YVLLAN+Y+ A  W +  ++R  +  +G++
Sbjct: 690 LGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVR 749

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           K PGCSWIE   +V+ FVAG SSHP ++K+   L+ L   M++EGY P T   L N +E 
Sbjct: 750 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEED 809

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
           EKE+ LCGHSEKLA+AFGILN   G  IRV KNLRVC DCH   KF+SK   REI+LRD 
Sbjct: 810 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDV 869

Query: 814 NRFHHFKDGRCSCRGFW 830
            RFHHFK+G CSC  +W
Sbjct: 870 RRFHHFKNGTCSCGDYW 886



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 214/422 (50%), Gaps = 26/422 (6%)

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           W  ++   + + +  + +  + +M+ LG   D      +L   A+   +  G+ +HA   
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 295 KACFSKE-ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           K  +  + ++  NTL+++Y KCGD     +VF+++ ER+ VSW S+I+       ++ A+
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 354 RLFRGMVREGIEPDVYAITSILHACA----CDGLLEIGKDVHDY-IKENDMQSSLYVSNA 408
             FR M+ E +EP  + + S+  AC+     +GLL +GK VH Y +++ ++ S  ++ N 
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLL-MGKQVHAYGLRKGELNS--FIINT 237

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVA--------MLQNFEPD 457
           L+ MY K G +A ++ +      +D+V+WNT++ +L   + F+         +L+  EPD
Sbjct: 238 LVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPD 297

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRN--VANAIVDMYVKCGVLVLARSL 515
           G T++ +LPAC+ L  L  G+E+H Y L++G S D N  V +A+VDMY  C  ++    +
Sbjct: 298 GFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGCRV 356

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ-AGIEPDEVSFISVLYACSHSGL 574
           FD +  + +  W  MI GY  + +  +A+  F +M + AG+  +  +   V+ AC  SG 
Sbjct: 357 FDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGA 416

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
             +       +        +    A M D+ SR G +  A R    M    D   W +++
Sbjct: 417 FSKKEAIHGFVVKRGLDRDRFVQNALM-DMYSRLGKIDIAKRIFGKME-DRDLVTWNTII 474

Query: 635 CG 636
            G
Sbjct: 475 TG 476



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 213/428 (49%), Gaps = 49/428 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N  +   C+     +A+E L     E  + D  T  S+L  C+ L+ L  GK++H+  
Sbjct: 265 TWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYA 324

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G + ++  +GS LV M+  C  +  G RVF+ + + K+ +WN ++  Y++    +E+
Sbjct: 325 LKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEA 384

Query: 183 LYLFKKM-QSLGIAADSYTFSCVLKCLAVVG------------------NSRRVKD---- 219
           L LF +M +S G+ A+S T + V+      G                    R V++    
Sbjct: 385 LLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMD 444

Query: 220 ----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL-------- 261
                     A ++F ++ DRD+V+WN +I+GY+ +   E  L +  +M  L        
Sbjct: 445 MYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERA 504

Query: 262 ---GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
                  +  T++T+L  CA   AL  G+ +HA+A+K   + +++  + L+DMY+KCG L
Sbjct: 505 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 564

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
             + +VF+++  R+V++W  ++  Y   G    AI + R M+ +G++P+     S+  AC
Sbjct: 565 QMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAAC 624

Query: 379 ACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP--VKDIV 435
           +  G++  G K  ++  K+  ++ S      ++D+  + G + +A  + N +P       
Sbjct: 625 SHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAG 684

Query: 436 SWNTMIGA 443
           +W++++GA
Sbjct: 685 AWSSLLGA 692


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 308/808 (38%), Positives = 460/808 (56%), Gaps = 58/808 (7%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           + E+   C  G L +A+ +L SS +   D   Y ++ +LC   +++E G +     C   
Sbjct: 60  STELRALCSHGQLAQALWLLESSAEPP-DEDAYVALFRLCEWRRAVEPGLRA----CAHA 114

Query: 127 IVIDD-----GV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              DD     G+ LG+ ++ M V  G+     RVF K+    VF WN+++  Y K+G   
Sbjct: 115 ---DDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLD 171

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------- 221
           E+L L+ +M   G+  D YTF CVL+    V + R  ++ H                   
Sbjct: 172 EALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALM 231

Query: 222 -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                        K+FD ++  D +SWN MI+G+  NG    GLE+F  ML+     +L 
Sbjct: 232 TMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLM 291

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+ +V         + F + +H  A+K  F+ +++F N+L+ MY+  G +  A  VF +M
Sbjct: 292 TITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRM 351

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             R  ++WT+MI+GY + G  D A+ ++  M    + PD   I S L ACAC G L++G 
Sbjct: 352 DTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGV 411

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
            +H+  +     S + V+NA+++MYAK   +  A  VF  M  KD+VSW++MI       
Sbjct: 412 KLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNH 471

Query: 443 ----ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
               AL  F  ML + +P+ VT    L ACA+  AL  G+EIH ++LR GI  +  + NA
Sbjct: 472 RNFEALYYFRHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNA 531

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           ++D+YVKCG    A + F    AKD++SW IMIAG+  HG G  A++ FN M + G  PD
Sbjct: 532 LIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPD 591

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
           EV+F+++L ACS  G+V EGW  F+ M  + +I P L+HYACMVDLLSR G L+EAY FI
Sbjct: 592 EVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFI 651

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
             MP+ PDA +WG+LL GCRIH  V+L E  A++V  LEP++ GY+VLL ++YA+A  W+
Sbjct: 652 NEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWD 711

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           ++ ++R+ +  +GL  + GCSW+E+KG V+ F+    SHP  ++I ++L+ +   MK  G
Sbjct: 712 KLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASG 771

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
           Y P   +     DE+ K+   CGHSE+LA+AFG++N   G +I VTKN   C  CH + K
Sbjct: 772 YAPVESHC--PEDEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILK 829

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSC 826
            +S   RR+I++RDS + HHFKDG CSC
Sbjct: 830 MISNIVRRDIIVRDSKQLHHFKDGSCSC 857


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 300/812 (36%), Positives = 455/812 (56%), Gaps = 82/812 (10%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICE------SGIVIDDGVLGSKLVFMFVTCGDL 148
           D   + ++L+  A ++ L  GK++H+ + +      S + ID+      LV M+  CG L
Sbjct: 9   DNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDN-----TLVNMYGKCGGL 63

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKC 207
            +  +VF++I       WN ++    +   ++ ++  F+ M   G    S+T  S  L C
Sbjct: 64  GDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALAC 123

Query: 208 ---------------------------------LAVVGNSRRVKDAHKLFDELSDRDVVS 234
                                            +A+     R+ DA  L     DRD+V+
Sbjct: 124 SNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVT 183

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           WN MIS +  N    + L   + M+  G   D  T  +VL  C++   L  G+ +HA+AL
Sbjct: 184 WNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYAL 243

Query: 295 KACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           +     E SF  + L+DMY  CG ++    VF+ + +R +  W +MIAGYA+    + A+
Sbjct: 244 RTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKAL 303

Query: 354 RLFRGM-VREGIEPDVYAITSILHA-CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
            LF  M    G+  +   ++SI+ A   C+G+    + +H Y+ +  ++++ Y+ NAL+D
Sbjct: 304 MLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISR-KEGIHGYVIKRGLETNRYLQNALID 362

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ--------- 452
           MY++ G +  ++ +F+ M  +DIVSWNT+I           AL L   M +         
Sbjct: 363 MYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDG 422

Query: 453 --------NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
                    F+P+ +T+  +LP CASL+AL +G+EIH Y +R+ +++   V +A+VDMY 
Sbjct: 423 DYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYA 482

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-----IEPDE 559
           KCG L LAR +FD +P +++I+W ++I  YGMHG G +++  F DM   G     ++P E
Sbjct: 483 KCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTE 542

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+FI++  +CSHSG+VDEG   F+ M+ E  IEP  +HYAC+VDL+ R G + EAY  + 
Sbjct: 543 VTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVN 602

Query: 620 MMPVAPDAT-IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
            MP   D    W SLL  CRI+H +++ E  AE++ +L+PD   +YVLL+N+Y+ A  W+
Sbjct: 603 TMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWD 662

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           +   LR ++   G+KK PGCSWIE   +V+ F+AG  SHP ++K+   L+ L   +K+EG
Sbjct: 663 KAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEG 722

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
           Y P T   L + DE EKE  LCGHSEKLA+AFGILN P G TIRV KNLRVC DCH  +K
Sbjct: 723 YVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASK 782

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           F+SK   REI+LRD+ RFHHFKDG CSC  +W
Sbjct: 783 FISKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 202/404 (50%), Gaps = 30/404 (7%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK--EISFNNTLLDMYSKC 315
           M+  GF+ D      VL   A    L  G+ +HA   K  +     ++ +NTL++MY KC
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G L  A +VF+++ ER  VSW S+I+   R   ++ AI+ FR M+ EG EP  + + S+ 
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 376 HACAC----DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            AC+     DGL  +GK +H          + + +NALM MYAK G + DA+S+      
Sbjct: 121 LACSNLRKRDGLW-LGKQIHGCCFRKGHWRT-FSNNALMAMYAKLGRLDDAKSLLVLFED 178

Query: 432 KDIVSWNTMIGALD-----------LFVAMLQNFEPDGVTMACILPACASLAALERGREI 480
           +D+V+WN+MI +             L + +L+  +PDGVT A +LPAC+ L  L  G+EI
Sbjct: 179 RDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEI 238

Query: 481 HGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           H Y LR   +  +  V +A+VDMY  CG +   R +FD +  + +  W  MIAGY     
Sbjct: 239 HAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEH 298

Query: 540 GCDAIATFNDMR-QAGIEPDEVSFISVLYACSHSGLVD--EGWRFFNMMRYECNIEPKLE 596
              A+  F +M   AG+  +  +  S++ A      +   EG   + + R    +E    
Sbjct: 299 DEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKR---GLETNRY 355

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMP----VAPDATIWGSLLCG 636
               ++D+ SR G++  + R  + M     V+ +  I   ++CG
Sbjct: 356 LQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICG 399



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 223/451 (49%), Gaps = 66/451 (14%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E  K D  T+ S+L  C+ L  L  GK++H+    +  VI++  +GS LV M+  CG ++
Sbjct: 210 EGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVE 269

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSCVLKC- 207
            GR VF+ + + K+ +WN ++  Y+++ + +++L LF +M+ + G+ +++ T S ++   
Sbjct: 270 SGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAY 329

Query: 208 LAVVGNSRR-------------------------------VKDAHKLFDELSDRDVVSWN 236
           +   G SR+                               +K + ++FD + DRD+VSWN
Sbjct: 330 VRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWN 389

Query: 237 CMISGYIANGVAEKGLEVFKEMLNL----------------GFNVDLATMVTVLSGCANC 280
            +I+ Y+  G +   L +  EM  +                 F  +  T++TVL GCA+ 
Sbjct: 390 TIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASL 449

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
            AL  G+ +HA+A++   + +++  + L+DMY+KCG L+ A RVF++M  R+V++W  +I
Sbjct: 450 SALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVII 509

Query: 341 AGYAREGVFDGAIRLFRGMVREG-----IEPDVYAITSILHACACDGLLEIGKDV-HDYI 394
             Y   G    ++ LF  MV EG     ++P      ++  +C+  G+++ G  + H   
Sbjct: 510 MAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMK 569

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP--VKDIVSWNTMIGALDLF----- 447
            E+ ++ +      ++D+  + G + +A  + N MP     + +W++++GA  ++     
Sbjct: 570 NEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEI 629

Query: 448 ----VAMLQNFEPDGVTMACILPACASLAAL 474
                  L   +PD  +   +L    S A L
Sbjct: 630 GEIAAENLLQLQPDVASHYVLLSNIYSSAGL 660



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 147/600 (24%), Positives = 259/600 (43%), Gaps = 85/600 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLED---GKKVH 119
           ++N+ I   C     E A++   L   E  +  + T  S+   C++L+  +    GK++H
Sbjct: 80  SWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIH 139

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
                 G         + L+ M+   G L + + +    ++  +  WN ++  +S+   F
Sbjct: 140 GCCFRKGHW--RTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERF 197

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLA--------------------VVGNS----- 214
            E+L   + M   G+  D  TF+ VL   +                    V+ NS     
Sbjct: 198 MEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSA 257

Query: 215 --------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNV 265
                    +V+    +FD + DR +  WN MI+GY  +   EK L +F EM    G   
Sbjct: 258 LVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYS 317

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +  TM +++     C  +     +H + +K          N L+DMYS+ GD+  + R+F
Sbjct: 318 NATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIF 377

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-------EG---------IEPDVY 369
           + M +R +VSW ++I  Y   G    A+ L   M R       +G          +P+  
Sbjct: 378 DSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSI 437

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            + ++L  CA    L  GK++H Y   N + S + V +AL+DMYAKCG +  A  VF+QM
Sbjct: 438 TLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQM 497

Query: 430 PVKDIVSWNTMIGA----------LDLFVAMLQ------NFEPDGVTMACILPACASLAA 473
           P++++++WN +I A          L+LF  M+         +P  VT   +  +C+    
Sbjct: 498 PIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGM 557

Query: 474 LERGREI-HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA--KDLISWTIM 530
           ++ G  + H     HGI    +    IVD+  + G +  A  L + +P+    + +W+ +
Sbjct: 558 VDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSL 617

Query: 531 IAGYGM-HGFGCDAIATFNDMRQAGIEPDEVS---FISVLYACSHSGLVDEGWRFFNMMR 586
           +    + H      IA  N ++   ++PD  S    +S +Y  S +GL D+       M+
Sbjct: 618 LGACRIYHNIEIGEIAAENLLQ---LQPDVASHYVLLSNIY--SSAGLWDKAMNLRRRMK 672


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 307/816 (37%), Positives = 454/816 (55%), Gaps = 53/816 (6%)

Query: 65  NYNAEIGRF------CEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKV 118
           ++NA IG +      CE   + +AM  L ++     D  T  S+L+          G +V
Sbjct: 128 SWNALIGAYLSSGSACEALGVYRAMR-LSAASGVAPDGCTLASVLKASGVEGDGRCGCEV 186

Query: 119 HSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK-VFIWNLLMHEYSKTG 177
           H +  + G+      + + L+ M+  CG L    RVF  + +G+ V  WN ++    + G
Sbjct: 187 HGLAVKHGL-DRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNG 245

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSR------------------- 215
            F ++L LF+ MQ   ++ +SYT   VL+    LA +   R                   
Sbjct: 246 MFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNA 305

Query: 216 ---------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                    RV  A ++F E+ ++D +SWN M+S Y+ NG+  + +E   EML  GF  D
Sbjct: 306 LLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPD 365

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
            A +V++ S   + G L+ G+ VHA+A+K     +    NTL+DMY KC  ++ +  VF+
Sbjct: 366 HACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFD 425

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
           +M  +  +SWT++I  YA+      A+ +FR   +EGI+ D   I SIL AC+    + +
Sbjct: 426 RMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILL 485

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
            K +H Y   N +   L V N ++D+Y +CG +  +  +F  +  KDIV+W +MI     
Sbjct: 486 AKQLHCYAIRNGLLD-LVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYAN 544

Query: 443 ------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 AL LF  M   + +PD V +  IL A   L++L +G+E+HG+++R     +  +
Sbjct: 545 SGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAI 604

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            +++VDMY  CG L  A  +F+ +  KD++ WT MI   GMHG G  AI  F  M Q G+
Sbjct: 605 VSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGV 664

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
            PD VSF+++LYACSHS LV+EG  + +MM     +EP  EHYAC+VDLL R+G   EAY
Sbjct: 665 TPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAY 724

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
            FI+ MP+ P + +W SLL  CR+H   +LA   A  + ELEPDN G YVL++NV+AE  
Sbjct: 725 EFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMG 784

Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
           KW   K++R +IS RGL+K+P CSWIEI   V+ F    +SH  A++I   L  +   ++
Sbjct: 785 KWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLR 844

Query: 736 RE-GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           +E GY   TR  L +  E EK   L  HSE+LA++FG++N   G  +R+ KNLRVCGDCH
Sbjct: 845 KEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCH 904

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           E  K +SK   R+IV+RD+NRFHHF  G CSC  FW
Sbjct: 905 EFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/324 (33%), Positives = 161/324 (49%), Gaps = 20/324 (6%)

Query: 273 VLSGCANCGALMFGRAVHAFAL-KACFSKEISFNNT-LLDMYSKCGDLDGAIRVFEKMGE 330
           VL   A   A+  G  VHA A+       +  F  T LL MY KCG +  A  +F+ M  
Sbjct: 64  VLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSS 123

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGM---VREGIEPDVYAITSILHACACDGLLEIG 387
           R+V SW ++I  Y   G    A+ ++R M      G+ PD   + S+L A   +G    G
Sbjct: 124 RTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCG 183

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM-PVKDIVSWNTMIG---- 442
            +VH    ++ +  S +V+NAL+ MYAKCG +  A  VF  M   +D+ SWN+MI     
Sbjct: 184 CEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQ 243

Query: 443 ------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 ALDLF  M +     +  T   +L  C  LA L  GRE+H  +L+ G  ++ N+
Sbjct: 244 NGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSG--SEVNI 301

Query: 496 A-NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
             NA++ MY KCG +  A  +F  I  KD ISW  M++ Y  +G   +AI   ++M + G
Sbjct: 302 QCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGG 361

Query: 555 IEPDEVSFISVLYACSHSGLVDEG 578
            +PD    +S+  A  H G +  G
Sbjct: 362 FQPDHACIVSLSSAVGHLGWLLNG 385



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 141/307 (45%), Gaps = 21/307 (6%)

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY-IKENDMQSS- 402
           +EG    A+RL       G  P       +L   A    +  G  VH + +    ++   
Sbjct: 36  KEGNLRQALRLLTSQT-PGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDD 94

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM-- 450
            +++  L+ MY KCG +ADA  +F+ M  + + SWN +IGA          L ++ AM  
Sbjct: 95  GFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRL 154

Query: 451 --LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
                  PDG T+A +L A         G E+HG  ++HG+     VANA++ MY KCG+
Sbjct: 155 SAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGI 214

Query: 509 LVLARSLFDMI-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
           L  A  +F+++   +D+ SW  MI+G   +G    A+  F  M++A +  +  + + VL 
Sbjct: 215 LDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQ 274

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
            C+    ++ G R  +    +   E  ++  A +V + ++ G +  A R    +    D 
Sbjct: 275 VCTELAQLNLG-RELHAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREID-EKDY 331

Query: 628 TIWGSLL 634
             W S+L
Sbjct: 332 ISWNSML 338


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 305/830 (36%), Positives = 446/830 (53%), Gaps = 102/830 (12%)

Query: 100 CSILQLCA--DLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           C+ + + A  +  SL   K +H      G++     L + L+  ++          +  +
Sbjct: 160 CATIPITALKECNSLAHAKLLHQQSIMQGLLFH---LATNLIGTYIASNSTAYAILLLER 216

Query: 158 I--DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK--------- 206
           +      VF WN L+      G+ ++   L+++M+SLG   D YTF  V K         
Sbjct: 217 LPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLS 276

Query: 207 --------------------CLAVV---GNSRRVKDAHKLFDELSDR---DVVSWNCMIS 240
                               C AVV   G    ++ AH +FD+L  R   D+VSWN ++S
Sbjct: 277 LGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVS 336

Query: 241 GYIANGVAEKGLEVFKEMLNLGF-NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
            Y+    A   L +F +M      + D+ ++V +L  CA+  A + GR VH F++++   
Sbjct: 337 AYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLV 396

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            ++   N ++DMY+KCG ++ A +VF++M  + VVSW +M+ GY++ G  + A+ LF  M
Sbjct: 397 DDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERM 456

Query: 360 VREGIE-----------------------------------PDVYAITSILHACACDGLL 384
             E IE                                   P+V  + S+L AC   G L
Sbjct: 457 TEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGAL 516

Query: 385 EIGKDVHDY-IK-------ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD--I 434
             GK+ H Y IK        +     L V N L+DMYAKC S   A  +F+ +  KD  +
Sbjct: 517 LHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDV 576

Query: 435 VSWNTMIG----------ALDLFVAMLQ---NFEPDGVTMACILPACASLAALERGREIH 481
           V+W  MIG          AL LF  M +   + +P+  T++C L ACA LAAL  GR++H
Sbjct: 577 VTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVH 636

Query: 482 GYILRHGI-SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
            Y+LR+   S    VAN ++DMY K G +  A+ +FD +P ++ +SWT ++ GYGMHG G
Sbjct: 637 AYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRG 696

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
            DA+  F++MR+  + PD ++F+ VLYACSHSG+VD G  FFN M  +  ++P  EHYAC
Sbjct: 697 EDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYAC 756

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           MVDL  R G L EA + I  MP+ P   +W +LL  CR+H  V+L E  A  + ELE  N
Sbjct: 757 MVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGN 816

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
            G Y LL+N+YA A +W++V ++R  + R G+KK PGCSWI+ +  V  F  G  SHP +
Sbjct: 817 DGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQS 876

Query: 721 KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
           ++I   L  L   +K  GY P+T +AL + D+ EK   L  HSEKLA+A+GIL L     
Sbjct: 877 QQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAP 936

Query: 781 IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           IR+TKNLR+CGDCH    ++SK    EI+LRDS+RFHHFK+G CSC+G+W
Sbjct: 937 IRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 236/469 (50%), Gaps = 61/469 (13%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  +  +IL  CA L +   G++VH     SG+V DD  +G+ +V M+  CG ++E  +V
Sbjct: 363 DVISLVNILPACASLAASLRGRQVHGFSIRSGLV-DDVFVGNAVVDMYAKCGKMEEANKV 421

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F ++    V  WN ++  YS+ G  + +L LF++M                         
Sbjct: 422 FQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMT------------------------ 457

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                     +E  + DVV+W  +I+GY   G   + L+VF++M + G   ++ T+V++L
Sbjct: 458 ----------EENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLL 507

Query: 275 SGCANCGALMFGRAVHAFALKACF--------SKEISFNNTLLDMYSKCGDLDGAIRVFE 326
           S C + GAL+ G+  H +A+K           + ++   N L+DMY+KC   + A ++F+
Sbjct: 508 SACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFD 567

Query: 327 KMG--ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR--EGIEPDVYAITSILHACACDG 382
            +   +R VV+WT MI GYA+ G  + A++LF GM +  + I+P+ + ++  L ACA   
Sbjct: 568 SVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLA 627

Query: 383 LLEIGKDVHDYIKENDMQSS-LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
            L  G+ VH Y+  N   S  L+V+N L+DMY+K G +  A+ VF+ MP ++ VSW +++
Sbjct: 628 ALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLM 687

Query: 442 ----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH-GI 489
                      AL +F  M +    PDG+T   +L AC+    ++ G      + +  G+
Sbjct: 688 TGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGV 747

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL-ISWTIMIAGYGMH 537
                    +VD++ + G L  A  L + +P +   + W  +++   +H
Sbjct: 748 DPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLH 796


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 291/759 (38%), Positives = 433/759 (57%), Gaps = 45/759 (5%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
            K +H+++  +G V     + ++LV ++   GD+   R  F++I    V+ WN ++  Y 
Sbjct: 135 AKCLHALLVVAGKV-QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193

Query: 175 KTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSRRVK--------------- 218
             G+F E++  F ++  +  I  D YTF  VLK    + + R++                
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVA 253

Query: 219 --------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                          A  LFD++  RD+ SWN MISG I NG A + L+V  EM   G  
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 313

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           ++  T+V++L  C   G +     +H + +K     ++  +N L++MY+K G+L+ A + 
Sbjct: 314 MNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKA 373

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F++M    VVSW S+IA Y +      A   F  M   G +PD+  + S+    A     
Sbjct: 374 FQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDC 433

Query: 385 EIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           +  + VH +I +   +   + + NA++DMYAK G +  A  VF  +PVKD++SWNT+I  
Sbjct: 434 KNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITG 493

Query: 443 ---------ALDLFVAMLQNFE--PDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                    A++++  M +  E  P+  T   ILPA A + AL++G +IHG +++  +  
Sbjct: 494 YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHL 553

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D  VA  ++D+Y KCG LV A SLF  +P +  ++W  +I+ +G+HG     +  F +M 
Sbjct: 554 DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML 613

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
             G++PD V+F+S+L ACSHSG V+EG   F +M+ E  I+P L+HY CMVDLL R G L
Sbjct: 614 DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYL 672

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
             AY FI+ MP+ PDA+IWG+LL  CRIH  ++L +  ++ +FE++  N GYYVLL+N+Y
Sbjct: 673 EMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIY 732

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           A   KWE V K+R     RGLKK PG S IE+  KV++F  G  SHP  K+I   L+ L 
Sbjct: 733 ANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLT 792

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
            +MK  GY P   + L + +E EKE  L  HSE+LA+AFGI++ P    IR+ KNLRVCG
Sbjct: 793 AKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCG 852

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   KF+S+  +REIV+RDSNRFHHFKDG CSC  +W
Sbjct: 853 DCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 208/434 (47%), Gaps = 42/434 (9%)

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           F + +HA  + A   + I  +  L+++Y+  GD+  +   F+++ ++ V +W SMI+ Y 
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193

Query: 345 REGVFDGAIRLF-RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
             G F  AI  F + ++   I PD Y    +L AC   G L  G+ +H +  +   Q ++
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNV 250

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQ 452
           +V+ +L+ MY++ G    A S+F+ MP +D+ SWN MI           ALD+   M L+
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
             + + VT+  ILP C  L  +     IH Y+++HG+  D  V+NA+++MY K G L  A
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS-- 570
           R  F  +   D++SW  +IA Y  +     A   F  M+  G +PD ++ +S+    +  
Sbjct: 371 RKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS 430

Query: 571 ---------HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
                    H  ++  GW   +++               +VD+ ++ G L  A++  E++
Sbjct: 431 RDCKNSRSVHGFIMRRGWLMEDVVIGN-----------AVVDMYAKLGLLDSAHKVFEII 479

Query: 622 PVAPDATIWGSLLCGCR---IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           PV  D   W +L+ G     +  E     K+ E   E+ P N G +V +   YA     +
Sbjct: 480 PVK-DVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP-NQGTWVSILPAYAHVGALQ 537

Query: 679 EVKKLREKISRRGL 692
           +  K+  ++ +  L
Sbjct: 538 QGMKIHGRVIKTNL 551



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 198/416 (47%), Gaps = 38/416 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I    + GN  +A++VL     E  K++  T  SIL +C  L  +     +H  +
Sbjct: 283 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV 342

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+  D  V  + L+ M+   G+L++ R+ F ++    V  WN ++  Y +  +   +
Sbjct: 343 IKHGLEFDLFV-SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTA 401

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA-------------------------VVGNS--- 214
              F KMQ  G   D  T   +   +A                         V+GN+   
Sbjct: 402 HGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVD 461

Query: 215 -----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLA 268
                  +  AHK+F+ +  +DV+SWN +I+GY  NG+A + +EV+K M      + +  
Sbjct: 462 MYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQG 521

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V++L   A+ GAL  G  +H   +K     ++     L+D+Y KCG L  A+ +F ++
Sbjct: 522 TWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 581

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            + S V+W ++I+ +   G  +  ++LF  M+ EG++PD     S+L AC+  G +E GK
Sbjct: 582 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
                ++E  ++ SL     ++D+  + G +  A      MP++ D   W  ++GA
Sbjct: 642 WCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGA 697



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 159/383 (41%), Gaps = 73/383 (19%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T  S+  + A  +  ++ + VH  I   G +++D V+G+ +V M+   G L    +V
Sbjct: 416 DLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKV 475

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLA---- 209
           F  I    V  WN L+  Y++ G   E++ ++K M+    I  +  T+  +L   A    
Sbjct: 476 FEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGA 535

Query: 210 ----------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
                                       V G   R+ DA  LF ++     V+WN +IS 
Sbjct: 536 LQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISC 595

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           +  +G AEK L++F EML+ G   D  T V++LS C++ G +  G        K CF   
Sbjct: 596 HGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG--------KWCF--- 644

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                                R+ ++ G + S+  +  M+    R G  + A    + M 
Sbjct: 645 ---------------------RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDM- 682

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
              ++PD     ++L AC   G +E+GK   D + E D ++  Y    L ++YA  G   
Sbjct: 683 --PLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYV-LLSNIYANVGKWE 739

Query: 421 DAE---SVFNQMPVKDIVSWNTM 440
             +   S+  +  +K    W+T+
Sbjct: 740 GVDKVRSLARERGLKKTPGWSTI 762


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 285/788 (36%), Positives = 445/788 (56%), Gaps = 56/788 (7%)

Query: 89  SEKSKIDTK---TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           +EK +ID      YC+ + L          K++H+++  SG       L +KL+  +   
Sbjct: 39  NEKREIDFNRIFLYCTKVHL---------AKQLHALLVVSGKT-QSIFLSAKLINRYAFL 88

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCV 204
           GD+   R  F++I    V+ WN ++  Y++ G+F  ++  F +  S   + +D YTF  V
Sbjct: 89  GDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPV 148

Query: 205 LKCLAVVGNSRRVK----------DAH-------------------KLFDELSDRDVVSW 235
           ++    + + R+V           D +                    LFD +  RD+ +W
Sbjct: 149 IRACGNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTW 208

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N MISG+  NG   + LEVF EM     ++D  T+ ++L  C     ++ G  +H +A+K
Sbjct: 209 NAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIK 268

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
                ++   N L++MY+K G+L  A  +F +M  R +VSW S++A + +      A+ +
Sbjct: 269 LGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGV 328

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYA 414
           +  M   G+ PD+  + S+    A  G     + +H ++         + + NA++DMYA
Sbjct: 329 YNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYA 388

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM--LQNFEPDGVTMA 462
           K G +  A  VF  +PVKD++SWN++I           A+D++ +M       P+  T  
Sbjct: 389 KLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWV 448

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            IL A + L AL++G + HG ++++ +  D  V+  +VDMY KCG L  A SLF  +P +
Sbjct: 449 SILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQ 508

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
             +SW  +I+ +G+HG+G  A+  F +M+  G++PD ++F+S+L ACSHSGLVDEG   F
Sbjct: 509 SSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCF 568

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
            +M+    I P L+HY CMVDL  R G+L +A+ F++ MPV PD ++WG+LL  CRIH  
Sbjct: 569 QLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHEN 628

Query: 643 VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIE 702
           V+L   V++H+ ++E +N GYYVLL+N+YA+   WE V ++R     RGLKK PG S IE
Sbjct: 629 VELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIE 688

Query: 703 IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGH 762
           +  K+++F  G  +HP  ++I S L+ L  +MK  GY P   + L + ++ EKE  L  H
Sbjct: 689 VDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSH 748

Query: 763 SEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
           SE+LAMAFGI++ P   T+++ KNLRVCGDCH   KF+SK   REI++RDSNRFHHFKDG
Sbjct: 749 SERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDG 808

Query: 823 RCSCRGFW 830
            CSC  +W
Sbjct: 809 VCSCGDYW 816



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 200/417 (47%), Gaps = 39/417 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +NA I  F   G + +A+EV      +   +D+ T  S+L +C  L  +  G  +H   
Sbjct: 207 TWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYA 266

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+  D  V  + L+ M+   G+L+    +FN++    +  WN L+  + +      +
Sbjct: 267 IKLGLEFDLFVCNA-LINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIA 325

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----------SRR--------------- 216
           L ++ KM S+G+  D  T   +    A +GN           +RR               
Sbjct: 326 LGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIID 385

Query: 217 -------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLA 268
                  +  A K+F+ L  +DV+SWN +I+GY  NG+A + ++V+  M      V +  
Sbjct: 386 MYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQG 445

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V++L+  +  GAL  G   H   +K     +I  +  L+DMY KCG L  A+ +F ++
Sbjct: 446 TWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEV 505

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             +S VSW ++I+ +   G    A++LF+ M  EG++PD     S+L AC+  GL++ G+
Sbjct: 506 PHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQ 565

Query: 389 DVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
                ++E   ++ SL     ++D++ + G +  A +    MPV+ D+  W  ++GA
Sbjct: 566 WCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGA 622


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 290/800 (36%), Positives = 438/800 (54%), Gaps = 103/800 (12%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           LG+ +V  ++ CG       V  ++       WNLL+ E+ K G    ++ +  +M   G
Sbjct: 91  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150

Query: 194 IAADSYTFSCVLK-----------------------------CLAVVGNSRR---VKDAH 221
              D +T   VLK                             C A+V    R   +++A 
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210

Query: 222 KLFDELSDR---DVVSWNCMISGYIANGVAEKGLEVFKEMLNL------GFNVDLATMVT 272
            +FDE++ R   DV+SWN ++S ++ +  A   L++F +M  +          D+ ++V 
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  C +  A+   + VH  A++     ++   N L+D Y+KCG ++ A++VF  M  + 
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--------------------------- 365
           VVSW +M+AGY++ G F+ A  LF+ M +E I                            
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390

Query: 366 --------PDVYAITSILHACACDGLLEIGKDVHDYIKENDM----------QSSLYVSN 407
                   P+   I S+L ACA  G    G ++H Y  +N +             L V N
Sbjct: 391 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 450

Query: 408 ALMDMYAKCGSMADAESVFNQMPV--KDIVSWNTMIG----------ALDLFVAMLQN-- 453
           AL+DMY+KC S   A S+F+ +P+  +++V+W  MIG          AL LFV M+    
Sbjct: 451 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 510

Query: 454 -FEPDGVTMACILPACASLAALERGREIHGYILRHGI--SADRNVANAIVDMYVKCGVLV 510
              P+  T++CIL ACA LAA+  G++IH Y+LRH    S+   VAN ++DMY KCG + 
Sbjct: 511 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 570

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            AR +FD +  K  ISWT M+ GYGMHG G +A+  F+ MR+AG  PD+++F+ VLYACS
Sbjct: 571 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 630

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
           H G+VD+G  +F+ M  +  + P+ EHYAC +DLL+R+G L +A+R ++ MP+ P A +W
Sbjct: 631 HCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVW 690

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
            +LL  CR+H  V+LAE     + E+  +N G Y L++N+YA A +W++V ++R  + + 
Sbjct: 691 VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKS 750

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           G+KK PGCSW++ +     F  G  SHP + +I +LL+ L   +K  GY P+T +AL + 
Sbjct: 751 GIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDV 810

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           DE EK   L  HSEKLA+A+G+L    G  IR+TKNLRVCGDCH    ++SK    EIV+
Sbjct: 811 DEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVV 870

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RD +RFHHFK+G CSC G+W
Sbjct: 871 RDPSRFHHFKNGSCSCGGYW 890



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 250/511 (48%), Gaps = 67/511 (13%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           ++E+S  D  +  +IL  C  LK++   K+VH     +G    D  +G+ L+  +  CG 
Sbjct: 259 TNERS--DIISIVNILPACGSLKAVPQTKEVHGNAIRNG-TFPDVFVGNALIDAYAKCGL 315

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           ++   +VFN ++   V  WN ++  YS++GNF+ +  LFK M+   I             
Sbjct: 316 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL----------- 364

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                                  DVV+W  +I+GY   G + + L +F++M+  G   + 
Sbjct: 365 -----------------------DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 401

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACF----------SKEISFNNTLLDMYSKCGD 317
            T+++VLS CA+ GA   G  +HA++LK C            +++   N L+DMYSKC  
Sbjct: 402 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 461

Query: 318 LDGAIRVFE--KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE--GIEPDVYAITS 373
              A  +F+   + ER+VV+WT MI G+A+ G  + A++LF  M+ E  G+ P+ Y I+ 
Sbjct: 462 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 521

Query: 374 ILHACACDGLLEIGKDVHDYI-KENDMQSSLY-VSNALMDMYAKCGSMADAESVFNQMPV 431
           IL ACA    + IGK +H Y+ + +  +SS Y V+N L+DMY+KCG +  A  VF+ M  
Sbjct: 522 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ 581

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           K  +SW +M+           ALD+F  M +  F PD +T   +L AC+    +++G   
Sbjct: 582 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSY 641

Query: 481 HGYI-LRHGISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWTIMIAGYGMHG 538
              +   +G++         +D+  + G L  A R++ DM      + W  +++   +H 
Sbjct: 642 FDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHS 701

Query: 539 FGCDAIATFNDMRQAGIEPD-EVSFISVLYA 568
               A    N + +   E D   + IS +YA
Sbjct: 702 NVELAEHALNKLVEMNAENDGSYTLISNIYA 732



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F    S    ++  Y  CG  D A+ V E++     V W  +I  + ++G  D AI +  
Sbjct: 85  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 144

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M+R G  PD + +  +L AC        G   H  I  N  +S++++ NAL+ MY++CG
Sbjct: 145 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 204

Query: 418 SMADAESVFN---QMPVKDIVSWNTMIG----------ALDLFVAML-------QNFEPD 457
           S+ +A  +F+   Q  + D++SWN+++           ALDLF  M         N   D
Sbjct: 205 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 264

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
            +++  ILPAC SL A+ + +E+HG  +R+G   D  V NA++D Y KCG++  A  +F+
Sbjct: 265 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 324

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
           M+  KD++SW  M+AGY   G    A   F +MR+  I  D V++ +V+   S  G   E
Sbjct: 325 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 384

Query: 578 GWRFFNMMRY 587
               F  M +
Sbjct: 385 ALNLFRQMIF 394


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 291/800 (36%), Positives = 438/800 (54%), Gaps = 103/800 (12%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           LG+ +V  ++ CG       V  ++       WNLL+ E+ K G    ++ +  +M   G
Sbjct: 98  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157

Query: 194 IAADSYTFSCVLK-----------------------------CLAVVGNSRR---VKDAH 221
              D +T   VLK                             C A+V    R   +++A 
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217

Query: 222 KLFDELSDR---DVVSWNCMISGYIANGVAEKGLEVFKEMLNL------GFNVDLATMVT 272
            +FDE++ R   DV+SWN ++S ++ +  A   L++F +M  +          D+ ++V 
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  C +  A+   + VH  A++     ++   N L+D Y+KCG ++ A++VF  M  + 
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--------------------------- 365
           VVSW +M+AGY++ G F+ A  LF+ M +E I                            
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397

Query: 366 --------PDVYAITSILHACACDGLLEIGKDVHDY-------IKENDM---QSSLYVSN 407
                   P+   I S+L ACA  G    G ++H Y         +ND       L V N
Sbjct: 398 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 457

Query: 408 ALMDMYAKCGSMADAESVFNQMPV--KDIVSWNTMIG----------ALDLFVAMLQN-- 453
           AL+DMY+KC S   A S+F+ +P+  +++V+W  MIG          AL LFV M+    
Sbjct: 458 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 517

Query: 454 -FEPDGVTMACILPACASLAALERGREIHGYILRHGI--SADRNVANAIVDMYVKCGVLV 510
              P+  T++CIL ACA LAA+  G++IH Y+LRH    S+   VAN ++DMY KCG + 
Sbjct: 518 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 577

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            AR +FD +  K  ISWT M+ GYGMHG G +A+  F+ MR+AG  PD+++F+ VLYACS
Sbjct: 578 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 637

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
           H G+VD+G  +F+ M  +  + P+ EHYAC +DLL+R+G L +A+R ++ MP+ P A +W
Sbjct: 638 HCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVW 697

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
            +LL  CR+H  V+LAE     + E+  +N G Y L++N+YA A +W++V ++R  + + 
Sbjct: 698 VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKS 757

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           G+KK PGCSW++ +     F  G  SHP + +I +LL+ L   +K  GY P+T +AL + 
Sbjct: 758 GIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDV 817

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           DE EK   L  HSEKLA+A+G+L    G  IR+TKNLRVCGDCH    ++SK    EIV+
Sbjct: 818 DEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVV 877

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RD +RFHHFK+G CSC G+W
Sbjct: 878 RDPSRFHHFKNGSCSCGGYW 897



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 250/511 (48%), Gaps = 67/511 (13%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           ++E+S  D  +  +IL  C  LK++   K+VH     +G    D  +G+ L+  +  CG 
Sbjct: 266 TNERS--DIISIVNILPACGSLKAVPQTKEVHGNAIRNG-TFPDVFVGNALIDAYAKCGL 322

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           ++   +VFN ++   V  WN ++  YS++GNF+ +  LFK M+   I             
Sbjct: 323 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL----------- 371

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                                  DVV+W  +I+GY   G + + L +F++M+  G   + 
Sbjct: 372 -----------------------DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 408

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACF----------SKEISFNNTLLDMYSKCGD 317
            T+++VLS CA+ GA   G  +HA++LK C            +++   N L+DMYSKC  
Sbjct: 409 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 468

Query: 318 LDGAIRVFE--KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE--GIEPDVYAITS 373
              A  +F+   + ER+VV+WT MI G+A+ G  + A++LF  M+ E  G+ P+ Y I+ 
Sbjct: 469 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 528

Query: 374 ILHACACDGLLEIGKDVHDYI-KENDMQSSLY-VSNALMDMYAKCGSMADAESVFNQMPV 431
           IL ACA    + IGK +H Y+ + +  +SS Y V+N L+DMY+KCG +  A  VF+ M  
Sbjct: 529 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ 588

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           K  +SW +M+           ALD+F  M +  F PD +T   +L AC+    +++G   
Sbjct: 589 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSY 648

Query: 481 HGYI-LRHGISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWTIMIAGYGMHG 538
              +   +G++         +D+  + G L  A R++ DM      + W  +++   +H 
Sbjct: 649 FDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHS 708

Query: 539 FGCDAIATFNDMRQAGIEPD-EVSFISVLYA 568
               A    N + +   E D   + IS +YA
Sbjct: 709 NVELAEHALNKLVEMNAENDGSYTLISNIYA 739



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F    S    ++  Y  CG  D A+ V E++     V W  +I  + ++G  D AI +  
Sbjct: 92  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 151

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M+R G  PD + +  +L AC        G   H  I  N  +S++++ NAL+ MY++CG
Sbjct: 152 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 211

Query: 418 SMADAESVFN---QMPVKDIVSWNTMIG----------ALDLFVAML-------QNFEPD 457
           S+ +A  +F+   Q  + D++SWN+++           ALDLF  M         N   D
Sbjct: 212 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 271

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
            +++  ILPAC SL A+ + +E+HG  +R+G   D  V NA++D Y KCG++  A  +F+
Sbjct: 272 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 331

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
           M+  KD++SW  M+AGY   G    A   F +MR+  I  D V++ +V+   S  G   E
Sbjct: 332 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 391

Query: 578 GWRFFNMMRY 587
               F  M +
Sbjct: 392 ALNLFRQMIF 401


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 290/802 (36%), Positives = 443/802 (55%), Gaps = 105/802 (13%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           LG+ +V  ++ CG  K+   V  ++       WNLL+ E+ K G+   ++ +  +M   G
Sbjct: 85  LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144

Query: 194 IAADSYTFSCVLK-----------------------------CLAVVGNSRR---VKDAH 221
              D +T    LK                             C A+V    R   ++DA 
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204

Query: 222 KLFDELSDR---DVVSWNCMISGYIANGVAEKGLEVFKEMLNL------GFNVDLATMVT 272
            +FDE++ +   DV+SWN +++ ++        LE+F EM  +          D+ ++V 
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  CA+  AL   + +H++A++     +    N L+D Y+KCG ++ A++VF  M  + 
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGI---------------------------- 364
           VVSW +M+ GY + G F  A  LF  M +E I                            
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384

Query: 365 -------EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS------------SLYV 405
                  EP+   I S+L ACA  G L  G ++H Y  +  + S             L V
Sbjct: 385 QMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMV 444

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKD--IVSWNTMIG----------ALDLFVAMLQN 453
            NAL+DMY+KC S   A S+F+ +P ++  +V+W  MIG          AL +F  M+  
Sbjct: 445 YNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISK 504

Query: 454 ---FEPDGVTMACILPACASLAALERGREIHGYILRHGI--SADRNVANAIVDMYVKCGV 508
                P+  T++CIL ACA LAAL  G++IH Y+ RH     +   VAN ++DMY KCG 
Sbjct: 505 PYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGD 564

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +  AR++FD +P ++ +SWT M++GYGMHG G +A+  F+ M++AG  PD++SF+ +LYA
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSHSG+VD+G  +F++MR + ++    EHYAC++DLL+R G L +A++ I+ MP+ P A 
Sbjct: 625 CSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAV 684

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           IW +LL  CR+H  V+LAE     +  ++ +N G Y L++N+YA A +W++V ++R+ + 
Sbjct: 685 IWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMK 744

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
           + G+KK PGCSW++ K     F  G  SHP + +I SLL+RL   +K  GY P+T +AL 
Sbjct: 745 KSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALH 804

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + D+ EK   L  HSEKLA+A+G+L    G  IR+TKNLRVCGDCH    ++SK    EI
Sbjct: 805 DVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEI 864

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           ++RDS+RFHHFK+G CSC G+W
Sbjct: 865 IVRDSSRFHHFKNGSCSCGGYW 886



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 256/521 (49%), Gaps = 67/521 (12%)

Query: 80  EKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLV 139
           E +M V   +   + D  +  +IL  CA LK+L   K++HS    +G    D  + + L+
Sbjct: 243 EMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNG-TFADAFVCNALI 301

Query: 140 FMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSY 199
             +  CG + +  +VFN ++   V  WN ++  Y+++GNF  +  LF+ M+   I  D  
Sbjct: 302 DTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVI 361

Query: 200 TFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
           T+S V                                  I+GY   G +++ L+ F++M+
Sbjct: 362 TWSAV----------------------------------IAGYAQRGCSQEALDAFQQMI 387

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF------------SKEISFNNT 307
             G   +  T++++LS CA+ GAL  G  +HA++LK C              +++   N 
Sbjct: 388 LDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNA 447

Query: 308 LLDMYSKCGDLDGAIRVFEKMG--ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE--G 363
           L+DMYSKC     A  +F+ +   ER+VV+WT MI GYA+ G  + A+++F  M+ +   
Sbjct: 448 LIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYA 507

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLY-VSNALMDMYAKCGSMAD 421
           + P+ Y I+ IL ACA    L +GK +H Y+ + ++ + S+Y V+N L+DMY+KCG +  
Sbjct: 508 VAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDT 567

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACAS 470
           A +VF+ MP ++ VSW +M+           ALD+F  M +  F PD ++   +L AC+ 
Sbjct: 568 ARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSH 627

Query: 471 LAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWT 528
              +++G      + R + + A       ++D+  +CG L  A +++ +M      + W 
Sbjct: 628 SGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWV 687

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPD-EVSFISVLYA 568
            +++   +H     A    N +     E D   + IS +YA
Sbjct: 688 ALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYA 728



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 157/303 (51%), Gaps = 20/303 (6%)

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
           S    ++  Y  CG    A+ V E++     V W  ++  + +EG  D AI +   M+R 
Sbjct: 84  SLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRA 143

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G +PD + +   L AC        G+ +H  I  N  +S+++V NAL+ MY++CGS+ DA
Sbjct: 144 GTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDA 203

Query: 423 ESVFNQMPVK---DIVSWNTMIG----------ALDLFVAM-------LQNFEPDGVTMA 462
             VF+++  K   D++SWN+++           AL+LF  M         N   D +++ 
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIV 263

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            ILPACASL AL + +EIH Y +R+G  AD  V NA++D Y KCG +  A  +F+++  K
Sbjct: 264 NILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFK 323

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           D++SW  M+ GY   G    A   F +MR+  I  D +++ +V+   +  G   E    F
Sbjct: 324 DVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAF 383

Query: 583 NMM 585
             M
Sbjct: 384 QQM 386



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 32/268 (11%)

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GAL 444
           H Y+    + + +  S      Y  CG+  DA SV  ++     V WN ++      G L
Sbjct: 77  HSYVSPKSLGTGVVAS------YLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHL 130

Query: 445 DLFVA----MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
           D  +     ML+   +PD  T+   L AC  L +   GR +HG I  +G  ++  V NA+
Sbjct: 131 DRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNAL 190

Query: 500 VDMYVKCGVLVLARSLFDMIPAK---DLISWTIMIAGYGMHGFGCDAIATFNDM------ 550
           V MY +CG L  A  +FD I  K   D+ISW  ++A +        A+  F++M      
Sbjct: 191 VAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHE 250

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC--MVDLLSRT 608
           +      D +S +++L AC+    + +      +  Y        + + C  ++D  ++ 
Sbjct: 251 KATNERSDIISIVNILPACASLKALPQ---IKEIHSYAIRNGTFADAFVCNALIDTYAKC 307

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           G++++A +   +M    D   W +++ G
Sbjct: 308 GSMNDAVKVFNVMEFK-DVVSWNAMVTG 334



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 29/253 (11%)

Query: 43  HSSCTINPISASISKTLVCKTKN---YNAEIGRFCEVGNLEKAMEVLYSSEKSKI----- 94
           +S C     + SI  ++  + +N   +   IG + + G+   A+++ +S   SK      
Sbjct: 452 YSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKI-FSEMISKPYAVAP 510

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIIC-----ESGIVIDDGVLGSKLVFMFVTCGDLK 149
           +  T   IL  CA L +L  GK++H+ +      E  +      + + L+ M+  CGD+ 
Sbjct: 511 NAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYF----VANCLIDMYSKCGDVD 566

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
             R VF+ +       W  +M  Y   G  KE+L +F KMQ  G   D  +F   L  L 
Sbjct: 567 TARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISF---LVLLY 623

Query: 210 VVGNSRRVKDAHKLFDEL-SDRDVVS----WNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
              +S  V      FD +  D DVV+    + C+I      G  +K  +  +EM      
Sbjct: 624 ACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEM---PME 680

Query: 265 VDLATMVTVLSGC 277
                 V +LS C
Sbjct: 681 PSAVIWVALLSAC 693


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 291/759 (38%), Positives = 431/759 (56%), Gaps = 45/759 (5%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
            K +H+++  +G V     + ++LV ++   GD+   R  F++I    V+ WN ++  Y 
Sbjct: 135 AKCLHALLVVAGKV-QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193

Query: 175 KTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSRRVK--------------- 218
             G+F E++  F ++  +  I  D YTF  VLK    + + RR+                
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVA 253

Query: 219 --------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                          A  LFD++  RD+ SWN MISG I NG A + L+V  EM   G  
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 313

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           ++  T+V++L  C   G +     +H + +K     ++  +N L++MY+K G+L+ A + 
Sbjct: 314 MNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKA 373

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F++M    VVSW S+IA Y +      A   F  M   G +PD+  + S+    A     
Sbjct: 374 FQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDC 433

Query: 385 EIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           +  + VH +I +   +   + + NA++DMYAK G +  A  VF  + VKD++SWNT+I  
Sbjct: 434 KNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITG 493

Query: 443 ---------ALDLFVAMLQNFE--PDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                    A++++  M +  E  P+  T   ILPA A + AL++G  IHG +++  +  
Sbjct: 494 YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHL 553

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D  VA  ++D+Y KCG LV A SLF  +P +  ++W  +I+ +G+HG     +  F +M 
Sbjct: 554 DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML 613

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
             G++PD V+F+S+L ACSHSG V+EG   F +M+ E  I+P L+HY CMVDLL R G L
Sbjct: 614 DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYL 672

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
             AY FI+ MP+ PDA+IWG+LL  CRIH  ++L +  ++ +FE++  N GYYVLL+N+Y
Sbjct: 673 EMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIY 732

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           A   KWE V K+R     RGLKK PG S IE+  KV++F  G  SHP  K+I   L+ L 
Sbjct: 733 ANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLT 792

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
            +MK  GY P   + L + +E EKE  L  HSE+LA+AFGI++ P    IR+ KNLRVCG
Sbjct: 793 AKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCG 852

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   KF+S+  +REIV+RDSNRFHHFKDG CSC  +W
Sbjct: 853 DCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 207/434 (47%), Gaps = 42/434 (9%)

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           F + +HA  + A   + I  +  L+++Y+  GD+  +   F+++ ++ V +W SMI+ Y 
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193

Query: 345 REGVFDGAIRLF-RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
             G F  AI  F + ++   I PD Y    +L AC   G L  G+ +H +  +   Q ++
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNV 250

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQ 452
           +V+ +L+ MY++ G    A S+F+ MP +D+ SWN MI           ALD+   M L+
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
             + + VT+  ILP C  L  +     IH Y+++HG+  D  V+NA+++MY K G L  A
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS-- 570
           R  F  +   D++SW  +IA Y  +     A   F  M+  G +PD ++ +S+    +  
Sbjct: 371 RKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS 430

Query: 571 ---------HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
                    H  ++  GW   +++               +VD+ ++ G L  A++  E++
Sbjct: 431 RDCKNSRSVHGFIMRRGWLMEDVVIGN-----------AVVDMYAKLGLLDSAHKVFEII 479

Query: 622 PVAPDATIWGSLLCGCR---IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
            V  D   W +L+ G     +  E     K+ E   E+ P N G +V +   YA     +
Sbjct: 480 LVK-DVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP-NQGTWVSILPAYAHVGALQ 537

Query: 679 EVKKLREKISRRGL 692
           +  ++  ++ +  L
Sbjct: 538 QGMRIHGRVIKTNL 551



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 198/416 (47%), Gaps = 38/416 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I    + GN  +A++VL     E  K++  T  SIL +C  L  +     +H  +
Sbjct: 283 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV 342

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+  D  V  + L+ M+   G+L++ R+ F ++    V  WN ++  Y +  +   +
Sbjct: 343 IKHGLEFDLFV-SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTA 401

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA-------------------------VVGNS--- 214
              F KMQ  G   D  T   +   +A                         V+GN+   
Sbjct: 402 HGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVD 461

Query: 215 -----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLA 268
                  +  AHK+F+ +  +DV+SWN +I+GY  NG+A + +EV+K M      + +  
Sbjct: 462 MYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQG 521

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V++L   A+ GAL  G  +H   +K     ++     L+D+Y KCG L  A+ +F ++
Sbjct: 522 TWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 581

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            + S V+W ++I+ +   G  +  ++LF  M+ EG++PD     S+L AC+  G +E GK
Sbjct: 582 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
                ++E  ++ SL     ++D+  + G +  A      MP++ D   W  ++GA
Sbjct: 642 WCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGA 697



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 159/383 (41%), Gaps = 73/383 (19%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T  S+  + A  +  ++ + VH  I   G +++D V+G+ +V M+   G L    +V
Sbjct: 416 DLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKV 475

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLA---- 209
           F  I    V  WN L+  Y++ G   E++ ++K M+    I  +  T+  +L   A    
Sbjct: 476 FEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGA 535

Query: 210 ----------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
                                       V G   R+ DA  LF ++     V+WN +IS 
Sbjct: 536 LQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISC 595

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           +  +G AEK L++F EML+ G   D  T V++LS C++ G +  G        K CF   
Sbjct: 596 HGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG--------KWCF--- 644

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                                R+ ++ G + S+  +  M+    R G  + A    + M 
Sbjct: 645 ---------------------RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDM- 682

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
              ++PD     ++L AC   G +E+GK   D + E D ++  Y    L ++YA  G   
Sbjct: 683 --PLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYV-LLSNIYANVGKWE 739

Query: 421 DAE---SVFNQMPVKDIVSWNTM 440
             +   S+  +  +K    W+T+
Sbjct: 740 GVDKVRSLARERGLKKTPGWSTI 762


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 282/798 (35%), Positives = 449/798 (56%), Gaps = 79/798 (9%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           +++   S ++   Y S++Q C D  S + GK +H+ +  +G    D  L +K++ ++   
Sbjct: 61  IHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYN-PDAYLMTKILMLYARS 119

Query: 146 G---DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
           G   DL   R++F ++    +  WN ++  Y++  ++ E+  +F +M  +G+  D++TF+
Sbjct: 120 GCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFA 179

Query: 203 CVLKCLAVVGNSRRVKDAH--------------------------------KLFDELSDR 230
             L+    + +    K  H                                K+FDE+ +R
Sbjct: 180 SALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER 239

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNL--GFNVDLATMVTVLSGCANCGALMFGRA 288
           + V+WN +IS     G     L +F  M     G   D  T  T+L+ CAN      GR 
Sbjct: 240 NQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQ 299

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +HA  ++A  +K I     L+ MYS+CG L+ A  +F +M ER+  SW SMI GY + G 
Sbjct: 300 IHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGE 359

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+RLF+ M   GI+PD ++++S+L +C      + G+++H++I  N M+    +   
Sbjct: 360 TQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVV 419

Query: 409 LMDMYAKCGSMADAESVFNQMPVKD--IVSWNTMIG----------ALDLFVAMLQ-NFE 455
           L+DMYAKCGSM  A  V++Q   KD     WN+++           + + F+ ML+ + E
Sbjct: 420 LVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIE 479

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
            D +TM  I+    +L  LE                      A+VDMY KCG +  AR++
Sbjct: 480 YDVLTMVTIV----NLLVLE---------------------TALVDMYSKCGAITKARTV 514

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           FD +  K+++SW  MI+GY  HG   +A+  + +M + G+ P+EV+F+++L ACSH+GLV
Sbjct: 515 FDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLV 574

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           +EG R F  M+ + NIE K EHY CMVDLL R G L +A  F+E MP+ P+ + WG+LL 
Sbjct: 575 EEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLG 634

Query: 636 GCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
            CR+H ++ +    A+ +FEL+P N G YV+++N+YA A +W+EV+ +R+ +  +G+KK+
Sbjct: 635 ACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKD 694

Query: 696 PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEK 755
           PG SWIEI  ++ IF AG  +HP  ++I + L+ L L+ K  GY P T + L N  ++++
Sbjct: 695 PGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKE 754

Query: 756 EVA---LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRD 812
           E     L  HSE+LA++ G+++LP   TIRV KNLR+CGDCH   KF+SK   R I+ RD
Sbjct: 755 EEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARD 814

Query: 813 SNRFHHFKDGRCSCRGFW 830
           +NRFHHF++G+CSC  +W
Sbjct: 815 TNRFHHFENGKCSCGDYW 832


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 306/843 (36%), Positives = 447/843 (53%), Gaps = 105/843 (12%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
            YS+  +   T    S+L+ C   K+L + K  H  I   G       + S  V  ++ C
Sbjct: 20  FYSTFTTSPPTIPLISLLRQC---KTLINAKLAHQQIFVHGFT----EMFSYAVGAYIEC 72

Query: 146 GDLKEGRRVFNKI--DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
           G   E   +  ++   +  VF WN L+    K G   ++L  + +MQ LG   D YTF  
Sbjct: 73  GASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPF 132

Query: 204 VLKC--------------------------------LAVVGNSRRVKDAHKLFDELSDR- 230
           VLK                                 +A+ G    + DAH++FDE+ +R 
Sbjct: 133 VLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERK 192

Query: 231 --DVVSWNCMISGYIANGVAEKGLEVFKEMLN---LGFNVDLATMVTVLSGCANCGALMF 285
             D+VSWN +++ Y+  G +   L +   M N   L    D  T+V +L  CA+  AL  
Sbjct: 193 IEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQH 252

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ VH F+++     ++   N L+ MY+KC  ++ A +VFE + ++ VVSW +M+ GY++
Sbjct: 253 GKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQ 312

Query: 346 EGVFDGAIRLFRGMVRE-----------------------------------GIEPDVYA 370
            G FD A+ LF+ M  E                                   G+EP+V  
Sbjct: 313 IGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVT 372

Query: 371 ITSILHACACDGLLEIGKDVHDYIKEN-------DMQSSLYVSNALMDMYAKCGSMADAE 423
           + S+L  CA  G L  GK  H Y+ +N       D +  L V N L+DMYAKC S   A 
Sbjct: 373 LASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVAR 432

Query: 424 SVFNQMPVKD--IVSWNTMIG----------ALDLFVAMLQ---NFEPDGVTMACILPAC 468
           S+F+ +  KD  +V+W  MIG          AL LF  + +   + +P+  T++C L AC
Sbjct: 433 SIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMAC 492

Query: 469 ASLAALERGREIHGYILRHGISAD-RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           A L  L  GR++H Y LR+   ++   V N ++DMY K G +  AR++FD +  ++++SW
Sbjct: 493 ARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSW 552

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
           T ++ GYGMHG G +A+  F+ M++ G   D ++F+ VLYACSHSG+VD+G  +F+ M  
Sbjct: 553 TSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVK 612

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
              I P  EHYACMVDLL R G L+EA   I+ M + P A +W +LL   RIH  ++L E
Sbjct: 613 GFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGE 672

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
             A  + EL  +N G Y LL+N+YA A +W++V ++R  +   G++K PGCSWI+ K   
Sbjct: 673 YAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKST 732

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
             F  G  SHP +++I +LL  L   +K  GY P+T +AL + D+ EK   L  HSEKLA
Sbjct: 733 TTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLA 792

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
           +A+GIL    GQ IR+ KNLR+CGDCH    ++S     EIVLRDS+RFHHFK G CSCR
Sbjct: 793 VAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCR 852

Query: 828 GFW 830
            +W
Sbjct: 853 SYW 855


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 292/784 (37%), Positives = 446/784 (56%), Gaps = 50/784 (6%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S  D  +   +L++C  L     GK+VH    + G V +D  +G+ LV M++    +++G
Sbjct: 88  SPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFV-EDVSVGTSLVDMYMKTESVEDG 146

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV- 210
            RVF+++    V  W  L+  Y + G  +++L LF +MQ  GI  + +TF+ VL  LA  
Sbjct: 147 ERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAAD 206

Query: 211 -----------------------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMI 239
                                  VGNS          V DA  +FD + +R+ VSWN MI
Sbjct: 207 GAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMI 266

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           +G++ NG+  +  E+F  M   G  +      TV+  CAN   + F + +H   +K    
Sbjct: 267 AGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSD 326

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
            +++    L+  YSKC ++D A ++F  M G ++VVSWT++I+GY + G  D A+ LF  
Sbjct: 327 FDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQ 386

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M REG+ P+ +  ++IL A A     +I    H  + + + ++S  V  AL D Y+K G 
Sbjct: 387 MRREGVRPNHFTYSTILTANAAVSPSQI----HALVVKTNYENSPSVGTALSDSYSKIGD 442

Query: 419 MADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVTMACILPA 467
             +A  +F  +  KDIV+W+ M+          GA+ +F+ +  +  EP+  T + +L A
Sbjct: 443 ANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNA 502

Query: 468 CAS-LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
           CA+  A++E+G++ H   ++ G S    V++A+V MY K G +  A  +F     +DL+S
Sbjct: 503 CAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVS 562

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           W  MI+GY  HG G  ++  F +MR   +E D ++FI V+ AC+H+GLV+EG R+F++M 
Sbjct: 563 WNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMV 622

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
            + +I P +EHY+CMVDL SR G L +A   I  MP    ATIW +LL  CR+H  V+L 
Sbjct: 623 KDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLG 682

Query: 647 EKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGK 706
           E  AE +  L+P ++  YVLL+N+YA A  W+E  K+R+ +  + +KK  G SWIE+K K
Sbjct: 683 ELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNK 742

Query: 707 VNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKL 766
              F+AG  SHP + +I   L+ L + +K  GY+P T+Y L + +E  KEV L  HSE+L
Sbjct: 743 TFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERL 802

Query: 767 AMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           A+AFG++  P G  I++ KNLRVCGDCH + K +SK   R+IV+RDSNRFHHFK G CSC
Sbjct: 803 AIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSC 862

Query: 827 RGFW 830
             +W
Sbjct: 863 GDYW 866



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 247/478 (51%), Gaps = 20/478 (4%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           + +LFDE   + +   N ++  +  N   ++ L +F  +   G   D +++  VL  C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
               + G+ VH   +K  F +++S   +L+DMY K   ++   RVF++M  ++VVSWTS+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           +AGY + G+ + A++LF  M  EGI+P+ +   ++L   A DG +E G  VH  + ++ +
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
            S+++V N++++MY+K   ++DA++VF+ M  ++ VSWN+MI           A +LF  
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 450 M-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M L+  +      A ++  CA++  +   +++H  ++++G   D N+  A++  Y KC  
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344

Query: 509 LVLARSLFDMIPA-KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
           +  A  LF M+   ++++SWT +I+GY  +G    A+  F  MR+ G+ P+  ++ ++L 
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           A +            + +  + N E        + D  S+ G+ +EA +  E++    D 
Sbjct: 405 ANAAVSPSQ-----IHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELID-EKDI 458

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLANVYAEAEKWEEVKKL 683
             W ++L G     +++ A K+   + +  +EP+   +  +L    A     E+ K+ 
Sbjct: 459 VAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQF 516


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  534 bits (1375), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 291/754 (38%), Positives = 415/754 (55%), Gaps = 87/754 (11%)

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +D+ +  I+N L    S T +  ++      +   G+  D++  +   K L+   N+   
Sbjct: 11  LDSVQHTIFNCL---NSTTASLSQTRQAHAHILKTGLFNDTHLAT---KLLSHYANNMCF 64

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
            DA  + D + + +V S++ +I  +         L  F +ML  G   D   + + +  C
Sbjct: 65  ADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKAC 124

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A   AL   R VH  A  + F  +    ++L+ MY KC  +  A RVF++M E  VVSW+
Sbjct: 125 AGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWS 184

Query: 338 SMIAGYAREGVFDGAIRLF---------------RGMVR--------------------E 362
           +++A YAR+G  D A RLF                GM+                      
Sbjct: 185 ALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLR 244

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G EPD   I+S+L A      L +G  +H Y+ +  + S   VS+AL+DMY KC   ++ 
Sbjct: 245 GFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEM 304

Query: 423 ESVFNQMPVKDI-----------------------------------VSWNTMIG----- 442
             VF+QM   D+                                   VSW +MI      
Sbjct: 305 SQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQN 364

Query: 443 -----ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL+LF  M +   +P+ VT+ C+LPAC ++AAL  G+  H + LR GIS D  V 
Sbjct: 365 GRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVG 424

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           +A++DMY KCG +  +R  FD IP K+L+ W  +IAGY MHG   +A+  F+ M+++G +
Sbjct: 425 SALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQK 484

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           PD +SF  VL ACS SGL +EG  +FN M  +  IE ++EHYACMV LLSR G L +AY 
Sbjct: 485 PDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYA 544

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
            I  MPV PDA +WG+LL  CR+H+ V L E  AE +FELEP N G Y+LL+N+YA    
Sbjct: 545 MIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGM 604

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           W EV ++R+ +  +GL+KNPGCSWIE+K KV++ +AG  SHP   +I   L +L +EMK+
Sbjct: 605 WNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKK 664

Query: 737 EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
            GYFP+  + L + +E +KE  LCGHSEKLA+ FG+LN P G  ++V KNLR+CGDCH +
Sbjct: 665 LGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVV 724

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KF+S   RREI +RD+NRFHHFK+G CSC  +W
Sbjct: 725 IKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/541 (24%), Positives = 238/541 (43%), Gaps = 86/541 (15%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D +   S ++ CA L +L+  ++VH I   SG    D  + S LV M++ C  +++  RV
Sbjct: 113 DNRVLPSAVKACAGLSALKPARQVHGIASVSGF-DSDSFVQSSLVHMYIKCNQIRDAHRV 171

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+++    V  W+ L+  Y++ G   E+  LF +M   G+                    
Sbjct: 172 FDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQP------------------ 213

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                           +++SWN MI+G+  +G+  + + +F +M   GF  D  T+ +VL
Sbjct: 214 ----------------NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVL 257

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC------------------- 315
               +   L+ G  +H + +K     +   ++ L+DMY KC                   
Sbjct: 258 PAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVG 317

Query: 316 ------------GDLDGAIRVFEKMGER----SVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                       G ++ ++R+F ++ ++    +VVSWTSMIA  ++ G    A+ LFR M
Sbjct: 318 SCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREM 377

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
              G++P+   I  +L AC     L  GK  H +     + + +YV +AL+DMYAKCG +
Sbjct: 378 QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRI 437

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPAC 468
             +   F+ +P K++V WN +I           A+++F  M ++ + PD ++  C+L AC
Sbjct: 438 QASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSAC 497

Query: 469 ASLAALERGR-EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLIS 526
           +     E G    +    ++GI A       +V +  + G L  A ++   +P   D   
Sbjct: 498 SQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACV 557

Query: 527 WTIMIAGYGMH-GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           W  +++   +H       +A           P     +S +YA    G+ +E  R  +MM
Sbjct: 558 WGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYA--SKGMWNEVNRVRDMM 615

Query: 586 R 586
           +
Sbjct: 616 K 616



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 172/397 (43%), Gaps = 55/397 (13%)

Query: 267 LATMVTVLSGCANC-----GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           LA + +V     NC      +L   R  HA  LK     +      LL  Y+       A
Sbjct: 8   LALLDSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADA 67

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             V + + E +V S++++I  +++   F  A+  F  M+  G+ PD   + S + ACA  
Sbjct: 68  TLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGL 127

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             L+  + VH     +   S  +V ++L+ MY KC  + DA  VF++M   D+VSW+ ++
Sbjct: 128 SALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALV 187

Query: 442 GAL----------DLFVAM------------------------------------LQNFE 455
            A            LF  M                                    L+ FE
Sbjct: 188 AAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE 247

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           PDG T++ +LPA   L  L  G  IHGY+++ G+ +D+ V++A++DMY KC        +
Sbjct: 248 PDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQV 307

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           FD +   D+ S    I G   +G    ++  F  ++  G+E + VS+ S++  CS +G  
Sbjct: 308 FDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRD 367

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
            E    F  M+    ++P      C   LL   GN++
Sbjct: 368 IEALELFREMQI-AGVKPNSVTIPC---LLPACGNIA 400



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 21/229 (9%)

Query: 54  SISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLE 113
           S +  + C ++N     GR  E   L + M++       K ++ T   +L  C ++ +L 
Sbjct: 353 SWTSMIACCSQN-----GRDIEALELFREMQI----AGVKPNSVTIPCLLPACGNIAALM 403

Query: 114 DGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
            GK  H      GI  D  V GS L+ M+  CG ++  R  F+ I    +  WN ++  Y
Sbjct: 404 HGKAAHCFSLRRGISTDVYV-GSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGY 462

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR--- 230
           +  G  KE++ +F  MQ  G   D  +F+CV   L+    S   ++    F+ +S +   
Sbjct: 463 AMHGKAKEAMEIFDLMQRSGQKPDIISFTCV---LSACSQSGLTEEGSYYFNSMSSKYGI 519

Query: 231 --DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
              V  + CM++     G  E+   + + M     N D      +LS C
Sbjct: 520 EARVEHYACMVTLLSRAGKLEQAYAMIRRM---PVNPDACVWGALLSSC 565


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 284/779 (36%), Positives = 445/779 (57%), Gaps = 76/779 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A +  +C +G+ E+ +++ Y   +E  + D   +  + + C++LK+   GK V+  +
Sbjct: 157 SWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYM 216

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G   +  V GS ++ MF+ CG +   RR F +I+   VF+WN+++  Y+  G FK++
Sbjct: 217 LSIGFEGNSCVKGS-ILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKA 275

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-----DRDVVSWNC 237
           L     M+  G+  D  T++ ++   A  G   + ++A K F E+        +VVSW  
Sbjct: 276 LKCISDMKLSGVKPDQVTWNAIISGYAQSG---QFEEASKYFLEMGGLKDFKPNVVSWTA 332

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I+G   NG   + L VF++M+  G   +  T+ + +S C N   L  GR +H + +K  
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392

Query: 298 -FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
               ++   N+L+D Y+KC  ++ A R F  + +  +VSW +M+AGYA  G  + AI L 
Sbjct: 393 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELL 452

Query: 357 RGMVREGIEPDVYA-----------------------------------ITSILHACACD 381
             M  +GIEPD+                                     I+  L AC   
Sbjct: 453 SEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQV 512

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             L++GK++H Y+  N ++ S  V +AL+ MY+ C S+  A SVF+++  +D+V WN++I
Sbjct: 513 RNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSII 572

Query: 442 ----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      ALDL   M L N E + VTM   LPAC+ LAAL +G+EIH +I+R G+ 
Sbjct: 573 SACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLD 632

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
               + N+++DMY +CG +  +R +FD++P +DL+SW +MI+ YGMHGFG DA+  F   
Sbjct: 633 TCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXF 692

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
           R  G++P+ ++F ++L ACSHSGL++EGW++F MM+ E  ++P +E YACMVDLLSR G 
Sbjct: 693 RTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQ 752

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
            +E   FIE MP  P+A +WGSLL  CRIH    LAE  A ++FELEP ++G YVL+AN+
Sbjct: 753 FNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANI 812

Query: 671 YAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL 730
           Y+ A +WE+  K+R  +  RG+ K PGCSWIE+K K++ FV G +SHP  ++I       
Sbjct: 813 YSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISG----- 867

Query: 731 RLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
                        +   ++ DE EKE +LCGHSEK+A+AFG+++   G  +R+ KNLRV
Sbjct: 868 -------------KDGKLDVDEDEKEFSLCGHSEKIALAFGLISTTXGTPLRIIKNLRV 913



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 173/650 (26%), Positives = 290/650 (44%), Gaps = 124/650 (19%)

Query: 77  GNLEKAMEVLYSSEKSKID--TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G L  A  +L S + +  D   + Y SILQ C  L +L  G +VH+ +  +G+ + +  L
Sbjct: 68  GVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE-FL 126

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
           GS+L+ ++   G +++ RR+F+K+    VF W  +M  Y   G+++E++ LF  M + G+
Sbjct: 127 GSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGV 186

Query: 195 AADSYTFSCVLKCLAVVGNSRRVKD--------------------------------AHK 222
             D + F  V K  + + N R  KD                                A +
Sbjct: 187 RPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARR 246

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
            F+E+  +DV  WN M+SGY + G  +K L+   +M   G   D  T   ++SG      
Sbjct: 247 FFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG------ 300

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-----ERSVVSWT 337
                                        Y++ G  + A + F +MG     + +VVSWT
Sbjct: 301 -----------------------------YAQSGQFEEASKYFLEMGGLKDFKPNVVSWT 331

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY-IKE 396
           ++IAG  + G    A+ +FR MV EG++P+   I S + AC    LL  G+++H Y IK 
Sbjct: 332 ALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKV 391

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
            ++ S L V N+L+D YAKC S+  A   F  +   D+VSWN M+           A++L
Sbjct: 392 EELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIEL 451

Query: 447 FVAM-LQNFEPDGV-----------------------------------TMACILPACAS 470
              M  Q  EPD +                                   T++  L AC  
Sbjct: 452 LSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQ 511

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           +  L+ G+EIHGY+LR+ I     V +A++ MY  C  L +A S+F  +  +D++ W  +
Sbjct: 512 VRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSI 571

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I+     G   +A+    +M  + +E + V+ +S L ACS    + +G      +   C 
Sbjct: 572 ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI-IRCG 630

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           ++        ++D+  R G++ ++ R  ++MP   D   W  ++    +H
Sbjct: 631 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMISVYGMH 679



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 189/414 (45%), Gaps = 34/414 (8%)

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
           R GV + A  L   M     +  +    SIL  C     L +G  VH  +  N +    +
Sbjct: 66  RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QN 453
           + + L+++Y + G + DA  +F++M  +++ SW  ++            + LF  M+ + 
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
             PD      +  AC+ L     G++++ Y+L  G   +  V  +I+DM++KCG + +AR
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
             F+ I  KD+  W IM++GY   G    A+   +DM+ +G++PD+V++ +++   + SG
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSG 305

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA---YRFIEMMPVAPDATIW 630
             +E  ++F  M    + +P +  +  ++    + G   EA   +R + +  V P++   
Sbjct: 306 QFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITI 365

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV--LLANVYAEAEKWEEVKKLREKIS 688
            S +  C     ++   ++  +  ++E  ++   V   L + YA   K   V+  R K  
Sbjct: 366 ASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA---KCRSVEVARRKFG 422

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSH-PHAKKIESLLKRLRLEMKREGYFP 741
              +K+    SW       N  +AG +    H + IE     L  EMK +G  P
Sbjct: 423 M--IKQTDLVSW-------NAMLAGYALRGSHEEAIE-----LLSEMKFQGIEP 462


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 298/793 (37%), Positives = 457/793 (57%), Gaps = 65/793 (8%)

Query: 99  YCSIL-QLCADLKSLEDGKKVHSIIC-------ESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           YC++L + C   KSL  GK +H  +        E+ +   D V   KLV +++ C +LK 
Sbjct: 11  YCTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFD-VPFEKLVDLYIACSELKI 69

Query: 151 GRRVFNKIDN--GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
            R VF+K+ +    V +WNLL+  Y+  G ++E++ L+ KM   GI  + +TF  VLK  
Sbjct: 70  ARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKAC 129

Query: 209 AVVGNS----------RRVK----------------------DAHKLFDELSDRDVVSWN 236
           + +  +          +R++                      DA ++FD++  RDVV+WN
Sbjct: 130 SALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWN 189

Query: 237 CMISGY-IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
            MISG+ +  G  ++   +  +M N   + + +T+V VL   A   +L  G+ +H F ++
Sbjct: 190 SMISGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVR 248

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIR 354
             F  ++     +LD+Y KC  +D A R+F+ MG  ++ V+W++M+  Y        A+ 
Sbjct: 249 RGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALE 308

Query: 355 LFRGMVREGIEPDVYAIT-----SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
           LF  ++   ++ DV  ++     +++  CA    L  G  +H Y  ++     L V N L
Sbjct: 309 LFCQLLM--LKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTL 366

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM-LQNFEPDG 458
           + MYAKCG +  A   FN+M ++D VS+  +I            L +F+ M L    P+ 
Sbjct: 367 LSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEK 426

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
            T+A +LPACA LA L  G   H Y +  G +AD  + NA++DMY KCG +  AR +FD 
Sbjct: 427 ATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDR 486

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +  + ++SW  MI  YG+HG G +A+  F++M+  G++PD+V+FI ++ ACSHSGLV EG
Sbjct: 487 MHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEG 546

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
             +FN M  +  I P++EHYACMVDLLSR G   E + FIE MP+ PD  +WG+LL  CR
Sbjct: 547 KYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACR 606

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
           ++  V+L E V++ + +L P++TG +VLL+N+Y+   +W++  ++R     +G +K+PGC
Sbjct: 607 VYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGC 666

Query: 699 SWIEIKGKVNIFVAGG-SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEV 757
           SWIEI G V+ F+ GG  SHP   +I + L  L +EMKR GY  ++ Y   + +E EKE 
Sbjct: 667 SWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKER 726

Query: 758 ALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFH 817
            L  HSEKLA+AFGIL+L   + I VTKNLRVCGDCH   KF+S   +R+I +RD++RFH
Sbjct: 727 VLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFH 786

Query: 818 HFKDGRCSCRGFW 830
           HFKDG C+C  FW
Sbjct: 787 HFKDGICNCGDFW 799



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 201/415 (48%), Gaps = 44/415 (10%)

Query: 71  GRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           G + EV  L   M+   S   S I       +L   A + SL  GK++H      G V  
Sbjct: 200 GSYDEVARLLVQMQNDVSPNSSTI-----VGVLPAVAQVNSLRHGKEIHGFCVRRGFV-G 253

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI-WNLLMHEYSKTGNFKESLYLFKKM 189
           D V+G+ ++ ++  C  +   RR+F+ +   K  + W+ ++  Y      +E+L LF ++
Sbjct: 254 DVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQL 313

Query: 190 QSLG---IAADSYTFSCVLK---------------CLAV---------VGNSRR------ 216
             L    I   + T + V++               C A+         VGN+        
Sbjct: 314 LMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKC 373

Query: 217 --VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             +  A + F+E+  RD VS+  +ISGY+ NG +E+GL +F EM   G N + AT+ +VL
Sbjct: 374 GIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVL 433

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             CA+   L +G   H +A+   F+ +    N L+DMY+KCG +D A +VF++M +R +V
Sbjct: 434 PACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIV 493

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW +MI  Y   G+   A+ LF  M  EG++PD      ++ AC+  GL+  GK   + +
Sbjct: 494 SWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAM 553

Query: 395 KEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLF 447
            ++  +   +     ++D+ ++ G   +  S   +MP++ D+  W  ++ A  ++
Sbjct: 554 TQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVY 608



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 171/413 (41%), Gaps = 84/413 (20%)

Query: 52  SASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKS 111
           SA +   +VC       E+  FC++  L+  + VL +         T  +++++CA+L  
Sbjct: 291 SAMVGAYVVCDFMREALEL--FCQLLMLKDDVIVLSAV--------TLATVIRVCANLTD 340

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           L  G  +H    +SG V+ D ++G+ L+ M+  CG +    R FN++D      +  ++ 
Sbjct: 341 LSTGTCLHCYAIKSGFVL-DLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIIS 399

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---------------CLAVV----- 211
            Y + GN +E L +F +MQ  GI  +  T + VL                C A++     
Sbjct: 400 GYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTA 459

Query: 212 ------------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
                           ++  A K+FD +  R +VSWN MI  Y  +G+  + L +F  M 
Sbjct: 460 DTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQ 519

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
           + G   D  T + ++S C++ G +  G+                FN    D         
Sbjct: 520 SEGLKPDDVTFICLISACSHSGLVAEGK--------------YWFNAMTQDF-------- 557

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
           G I   E         +  M+   +R G+F         M    +EPDV    ++L AC 
Sbjct: 558 GIIPRMEH--------YACMVDLLSRAGLFKEVHSFIEKM---PLEPDVRVWGALLSACR 606

Query: 380 CDGLLEIGKDVHDYIKENDMQSS---LYVSNALMDMYAKCGSMADAESV-FNQ 428
               +E+G+ V   I++   +S+   + +SN    MY+  G   DA  V F Q
Sbjct: 607 VYKNVELGEGVSKKIQKLGPESTGNFVLLSN----MYSAVGRWDDAAQVRFTQ 655


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 283/736 (38%), Positives = 433/736 (58%), Gaps = 53/736 (7%)

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
           CGDL   R +F++I    +  +N L+  YS  G            +      ++YTF  V
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 205 LKCLAVVGNSRRVKDAH--------------------------------KLFDELSDRDV 232
           LK  + + + R  +  H                                 +F  +  RDV
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           V+WN M++GY  +G     +     M +     + +T+V +L   A  GAL  GRAVHA+
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHAY 254

Query: 293 ALKACFSKE----ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +++AC   +    +     LLDMY+KCG L  A RVFE M  R+ V+W++++ G+   G 
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314

Query: 349 FDGAIRLFRGMVREGI---EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
              A  LF+ M+ +G+    P   ++ S L ACA    L +GK +H  + ++ + + L  
Sbjct: 315 MLEAFSLFKDMLAQGLCFLSPT--SVASALRACANLSDLCLGKQLHALLAKSGLHTDLTA 372

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NF 454
            N+L+ MYAK G +  A ++F+QM VKD VS++ ++           A  +F  M   N 
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNV 432

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
           +PD  TM  ++PAC+ LAAL+ G+  HG ++  GI+++ ++ NA++DMY KCG + L+R 
Sbjct: 433 QPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQ 492

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +FD++PA+D++SW  MIAGYG+HG G +A A F DM+    EPD+V+FI ++ ACSHSGL
Sbjct: 493 IFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGL 552

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           V EG R+F+MM ++  I P++EHY  MVDLL+R G L EAY+FI+ MP+  D  +WG+LL
Sbjct: 553 VTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALL 612

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             CR+H  + L ++V+  + +L P+ TG +VLL+N+++ A +++E  ++R     +G KK
Sbjct: 613 GACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKK 672

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
           +PGCSWIEI G ++ F+ G  SH  + +I   L  + +++ + GY   T + L + +E E
Sbjct: 673 SPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEE 732

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
           KE AL  HSEKLA+AFG+L L   +TI VTKNLRVCGDCH + K+M+   +R I++RD+N
Sbjct: 733 KEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDAN 792

Query: 815 RFHHFKDGRCSCRGFW 830
           RFHHFK+G+CSC  FW
Sbjct: 793 RFHHFKNGQCSCGDFW 808



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 195/426 (45%), Gaps = 55/426 (12%)

Query: 85  VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID--DGVL-GSKLVFM 141
           +L   +    +  T  ++L L A   +L  G+ VH+    +  + D  DGVL G+ L+ M
Sbjct: 218 LLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDM 277

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSY 199
           +  CG L    RVF  +       W+ L+  +   G   E+  LFK M  Q L   + + 
Sbjct: 278 YAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTS 337

Query: 200 TFSCVLKC-------------------------------LAVVGNSRRVKDAHKLFDELS 228
             S +  C                               L++   +  +  A  LFD++ 
Sbjct: 338 VASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMV 397

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            +D VS++ ++SGY+ NG A++   VF++M       D+ATMV+++  C++  AL  G+ 
Sbjct: 398 VKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKC 457

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
            H   +    + E S  N L+DMY+KCG +D + ++F+ M  R +VSW +MIAGY   G+
Sbjct: 458 GHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGL 517

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD-----VHDYIKENDMQSSL 403
              A  LF  M  +  EPD      ++ AC+  GL+  GK       H Y     M+  +
Sbjct: 518 GKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYI 577

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA------LDL---FVAMLQN 453
                ++D+ A+ G + +A      MP+K D+  W  ++GA      +DL     +M+Q 
Sbjct: 578 ----GMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQ 633

Query: 454 FEPDGV 459
             P+G 
Sbjct: 634 LGPEGT 639



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 145/315 (46%), Gaps = 38/315 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            ++A +G F   G + +A  +   + +     +   +  S L+ CA+L  L  GK++H++
Sbjct: 301 TWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHAL 360

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           + +SG+  D    G+ L+ M+   G + +   +F+++       ++ L+  Y + G   E
Sbjct: 361 LAKSGLHTDL-TAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADE 419

Query: 182 SLYLFKKMQSLGIAADSYTF-SCVLKC--LAVVGNSR----------------------- 215
           +  +F+KMQ+  +  D  T  S +  C  LA + + +                       
Sbjct: 420 AFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALID 479

Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                 R+  + ++FD +  RD+VSWN MI+GY  +G+ ++   +F +M +     D  T
Sbjct: 480 MYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVT 539

Query: 270 MVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            + ++S C++ G +  G R  H  A K   +  +     ++D+ ++ G LD A +  + M
Sbjct: 540 FICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGM 599

Query: 329 GERSVVS-WTSMIAG 342
             ++ V  W +++  
Sbjct: 600 PLKADVRVWGALLGA 614



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/287 (20%), Positives = 124/287 (43%), Gaps = 13/287 (4%)

Query: 48  INPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQL 105
           I+  +    + +V  T +Y+A +  + + G  ++A  V    +   +  D  T  S++  
Sbjct: 386 IDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPA 445

Query: 106 CADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI 165
           C+ L +L+ GK  H  +   GI  +  +  + L+ M+  CG +   R++F+ +    +  
Sbjct: 446 CSHLAALQHGKCGHGSVIVRGIASETSICNA-LIDMYAKCGRIDLSRQIFDVMPARDIVS 504

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
           WN ++  Y   G  KE+  LF  M+      D  TF C+   ++   +S  V +  + F 
Sbjct: 505 WNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICL---ISACSHSGLVTEGKRWFH 561

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGL--EVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
            ++ +  ++        + + +A  G   E ++ +  +    D+     +L  C     +
Sbjct: 562 MMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNI 621

Query: 284 MFGRAVHAFALKACFSKEISFNNTLL-DMYSKCGDLDGA--IRVFEK 327
             G+ V +   +     E + N  LL +++S  G  D A  +R+ +K
Sbjct: 622 DLGKQVSSMIQQ--LGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQK 666


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 283/802 (35%), Positives = 438/802 (54%), Gaps = 105/802 (13%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           LG+ +V  ++ CG   +   V  ++       WNLL+  + + G    ++ +  +M   G
Sbjct: 85  LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144

Query: 194 IAADSYTFSCVLKC--------------------------------LAVVGNSRRVKDAH 221
              D +T    LK                                 +A+   S  ++DA 
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204

Query: 222 KLFDELSDR---DVVSWNCMISGYIANGVAEKGLEVFKEMLNL------GFNVDLATMVT 272
            +FDE++ +   DV+SWN +++ ++        L++F EM  +          D+ ++V 
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  CA+  AL   + +H++A++     +    N L+D Y+KCG +  A+ VF  M  + 
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGI---------------------------- 364
           VVSW +M+ GY + G F  A  LF+ M +E I                            
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384

Query: 365 -------EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS------------SLYV 405
                  EP+   I S+L ACA  G L  G + H Y  +  + S             L V
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKD--IVSWNTMIG----------ALDLFVAMLQN 453
            NAL+DMY+KC S   A ++FN +P ++  +V+W  MIG          AL LF  M+  
Sbjct: 445 HNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISK 504

Query: 454 ---FEPDGVTMACILPACASLAALERGREIHGYILRHG--ISADRNVANAIVDMYVKCGV 508
                P+  T++CIL ACA L++L  G++IH Y+ RH    S+   VAN ++DMY KCG 
Sbjct: 505 PYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGD 564

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +  AR++FD +P ++ +SWT M++GYGMHG G +A+  F+ M++AG  PD++SF+ +LYA
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSHSG+VD+G  +F++MR +  +    +HYAC++DLL+R+G L +A++ I+ MP+ P A 
Sbjct: 625 CSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAA 684

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           IW +LL  CR+H  V+LAE     +  ++ +N G Y L++N+YA A +W++V ++R+ + 
Sbjct: 685 IWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMK 744

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
           + G+KK PGCSW++ K     F  G  SHP + +I SLL+RL   +K  GY P+T +AL 
Sbjct: 745 KSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALH 804

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + D+ EK   L  HSEKLA+A+G+L    G  IR+TKNLRVCGDCH    ++SK    EI
Sbjct: 805 DVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEI 864

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           ++RDS+RFHHFK+G CSC G+W
Sbjct: 865 IVRDSSRFHHFKNGSCSCGGYW 886



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 166/619 (26%), Positives = 284/619 (45%), Gaps = 119/619 (19%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  +    E G L++A+ V     +  +K D  T    L+ C +L S   G   H +IC
Sbjct: 117 WNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLIC 176

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN---GKVFIWNLLMHEYSKTGNFK 180
            +G   +  V  + LV M+   G L++   VF++I       V  WN ++  + K  N +
Sbjct: 177 CNGFESNVFVCNA-LVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPR 235

Query: 181 ESLYLFKKMQSL-----------------------------------------GIAADSY 199
            +L LF +M ++                                         G  AD++
Sbjct: 236 TALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAF 295

Query: 200 TFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY----------------- 242
             + ++   A  G+   +KDA  +F+ +  +DVVSWN M++GY                 
Sbjct: 296 VCNALIDTYAKCGS---MKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMR 352

Query: 243 -------------IANGVAEKG-----LEVFKEMLNLGFNVDLATMVTVLSGCANCGALM 284
                        +  G A++G     L+ F++M+  G   +  T++++LS CA+ GAL 
Sbjct: 353 KENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALS 412

Query: 285 FGRAVHAFALKACF------------SKEISFNNTLLDMYSKCGDLDGAIRVFEKMG--E 330
            G   HA++LK C              +++  +N L+DMYSKC     A  +F  +   E
Sbjct: 413 QGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRE 472

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE--GIEPDVYAITSILHACACDGLLEIGK 388
           R+VV+WT MI GYA+ G  + A++LF  M+ +   + P+ Y I+ IL ACA    L +GK
Sbjct: 473 RNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGK 532

Query: 389 DVHDYI-KENDMQSSLY-VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
            +H Y+ + ++ +SS+Y V+N L+DMY+KCG +  A +VF+ MP ++ VSW +M+     
Sbjct: 533 QIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGM 592

Query: 443 ------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR--HGISADR 493
                 ALD+F  M +  F PD ++   +L AC+    +++G +    I+R  +G+ A  
Sbjct: 593 HGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFD-IMRSDYGVIASA 651

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQ 552
                ++D+  + G L  A      +P +   + W  +++   +H     A    N +  
Sbjct: 652 QHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVS 711

Query: 553 AGIEPD-EVSFISVLYACS 570
              E D   + IS +YA +
Sbjct: 712 MKAENDGSYTLISNIYATA 730



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 161/331 (48%), Gaps = 55/331 (16%)

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
           S    ++  Y  CG    A+ V E++     V W  ++  +  EG  D AI +   M+R 
Sbjct: 84  SLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRA 143

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G +PD + +   L AC        G   H  I  N  +S+++V NAL+ MY++ GS+ DA
Sbjct: 144 GTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDA 203

Query: 423 ESVFNQMPVK---DIVSWNTMIG----------ALDLFVAML-------QNFEPDGVTMA 462
             VF+++  K   D++SWN+++           ALDLF  M         N   D +++ 
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIV 263

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            ILPACASL AL + +EIH Y +R+G  AD  V NA++D Y KCG +  A ++F+++  K
Sbjct: 264 NILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFK 323

Query: 523 DLISWTIM-----------------------------------IAGYGMHGFGCDAIATF 547
           D++SW  M                                   IAGY   G+G +A+ TF
Sbjct: 324 DVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTF 383

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
             M   G EP+ V+ IS+L AC+  G + +G
Sbjct: 384 QQMILYGSEPNSVTIISLLSACASLGALSQG 414



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 26/228 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI-----DTKTYCSILQLCADLKSLEDGKKVH 119
            +   IG + + G+   A++ L+S   SK      +  T   IL  CA L SL  GK++H
Sbjct: 477 TWTVMIGGYAQYGDSNDALK-LFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIH 535

Query: 120 SIIC-----ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           + +      ES +      + + L+ M+  CGD+   R VF+ +       W  +M  Y 
Sbjct: 536 AYVTRHHEYESSVYF----VANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYG 591

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL-SDRDVV 233
             G  KE+L +F KMQ  G   D  +F   L  L    +S  V      FD + SD  V+
Sbjct: 592 MHGRGKEALDIFDKMQKAGFVPDDISF---LVLLYACSHSGMVDQGLDYFDIMRSDYGVI 648

Query: 234 S----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           +    + C+I     +G  +K  +  +EM         A  V +LS C
Sbjct: 649 ASAQHYACVIDLLARSGRLDKAWKTIQEM---PMEPSAAIWVALLSAC 693



 Score = 40.4 bits (93), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 11/133 (8%)

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
           H   + +++   +V  Y+ CG    A S+ + +     + W +++  +   G    AI  
Sbjct: 77  HSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGV 136

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM---RYECNIEPKLEHYAC--M 601
              M +AG +PD  +    L AC        G  F  ++    +E N+      + C  +
Sbjct: 137 SCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNV------FVCNAL 190

Query: 602 VDLLSRTGNLSEA 614
           V + SR+G+L +A
Sbjct: 191 VAMYSRSGSLEDA 203


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/626 (42%), Positives = 376/626 (60%), Gaps = 11/626 (1%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           R+++A  +FD L  +   SWN MI+GY+ +  AE  + +F+EM + G   +  T + +L 
Sbjct: 78  RLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILK 137

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            CA+  AL +G+ VHA         ++     LL MY KCG ++ A R+F+ +    ++S
Sbjct: 138 ACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIIS 197

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           WT MI  YA+ G    A RL   M +EG +P+     SIL+ACA +G L+  K VH +  
Sbjct: 198 WTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHAL 257

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL----------D 445
           +  ++  + V  AL+ MYAK GS+ DA  VF++M V+D+VSWN MIGA           D
Sbjct: 258 DAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYD 317

Query: 446 LFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           LF+ M  +  +PD +    IL ACAS  ALE  ++IH + L  G+  D  V  A+V MY 
Sbjct: 318 LFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYS 377

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           K G +  AR +FD +  ++++SW  MI+G   HG G DA+  F  M   G++PD V+F++
Sbjct: 378 KSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVA 437

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           VL ACSH+GLVDEG   +  M     IEP + H  CMVDLL R G L EA  FI+ M V 
Sbjct: 438 VLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVD 497

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           PD   WG+LL  CR +  V+L E VA+   +L+P N   YVLL+N+YAEA KW+ V  +R
Sbjct: 498 PDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVR 557

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
             +  RG++K PG SWIE+  K++ F+   SSHP  K+I     ++  ++K EGY P TR
Sbjct: 558 TMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDTR 617

Query: 745 YALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTA 804
             L N +  +KE+ +C HSEKLA+ +G+++ P G  IRV KNLRVC DCH   K +SK  
Sbjct: 618 LVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKVE 677

Query: 805 RREIVLRDSNRFHHFKDGRCSCRGFW 830
            REI++RD+NRFHHFKDG CSC  +W
Sbjct: 678 GREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 241/489 (49%), Gaps = 46/489 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D+  Y  +L+ C   K L   K+VH  I +S +  +  V+ + L+ +++ CG L+E R V
Sbjct: 27  DSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVM-NNLLHVYIECGRLQEARCV 85

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------- 207
           F+ +       WN ++  Y +  + ++++ LF++M   G+  ++ T+  +LK        
Sbjct: 86  FDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSAL 145

Query: 208 -------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                    L + G    + +A ++FD L + D++SW  MI  Y
Sbjct: 146 KWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAY 205

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             +G  ++   +  +M   GF  +  T V++L+ CA+ GAL + + VH  AL A    ++
Sbjct: 206 AQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDV 265

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
                L+ MY+K G +D A  VF++M  R VVSW  MI  +A  G    A  LF  M  E
Sbjct: 266 RVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTE 325

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G +PD     SIL+ACA  G LE  K +H +  ++ ++  + V  AL+ MY+K GS+ DA
Sbjct: 326 GCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDA 385

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASL 471
             VF++M V+++VSWN MI           AL++F  M     +PD VT   +L AC+  
Sbjct: 386 RVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHA 445

Query: 472 AALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFD-MIPAKDLISWTI 529
             ++ GR  +  + + +GI  D +  N +VD+  + G L+ A+   D M    D  +W  
Sbjct: 446 GLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGA 505

Query: 530 MIAGYGMHG 538
           ++     +G
Sbjct: 506 LLGSCRTYG 514



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/409 (32%), Positives = 212/409 (51%), Gaps = 16/409 (3%)

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
           AN ++E  + V    L  G   D    V VL  C     LM  + VH   +K+   +   
Sbjct: 6   ANTLSE-AIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAH 64

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N LL +Y +CG L  A  VF+ + ++S  SW +MIAGY      + A+RLFR M  EG
Sbjct: 65  VMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEG 124

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           ++P+      IL ACA    L+ GK+VH  I+   ++S + V  AL+ MY KCGS+ +A 
Sbjct: 125 VQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEAR 184

Query: 424 SVFNQMPVKDIVSWNTMIGAL-------DLFVAMLQ----NFEPDGVTMACILPACASLA 472
            +F+ +   DI+SW  MIGA        + +  MLQ     F+P+ +T   IL ACAS  
Sbjct: 185 RIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           AL+  + +H + L  G+  D  V  A+V MY K G +  AR +FD +  +D++SW +MI 
Sbjct: 245 ALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIG 304

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW-RFFNMMRYECNI 591
            +  HG G +A   F  M+  G +PD + F+S+L AC+ +G ++  W +  +    +  +
Sbjct: 305 AFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALE--WVKKIHRHALDSGL 362

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           E  +     +V + S++G++ +A    + M V  +   W +++ G   H
Sbjct: 363 EVDVRVGTALVHMYSKSGSIDDARVVFDRMKV-RNVVSWNAMISGLAQH 410



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 210/415 (50%), Gaps = 37/415 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + E  + E AM +      E  + +  TY  IL+ CA L +L+ GK+VH+ I
Sbjct: 96  SWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACI 155

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G+  D  V G+ L+ M+  CG + E RR+F+ + N  +  W +++  Y+++GN KE+
Sbjct: 156 RHGGLESDVRV-GTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEA 214

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK-------------------- 222
             L  +M+  G   ++ T+  +L   A  G  + VK  H+                    
Sbjct: 215 YRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQM 274

Query: 223 ------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                       +FD +  RDVVSWN MI  +  +G   +  ++F +M   G   D    
Sbjct: 275 YAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMF 334

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           +++L+ CA+ GAL + + +H  AL +    ++     L+ MYSK G +D A  VF++M  
Sbjct: 335 LSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKV 394

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R+VVSW +MI+G A+ G+   A+ +FR M   G++PD     ++L AC+  GL++ G+  
Sbjct: 395 RNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQ 454

Query: 391 HDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           +  + +   ++  +   N ++D+  + G + +A+   + M V  D  +W  ++G+
Sbjct: 455 YLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGS 509


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 287/747 (38%), Positives = 420/747 (56%), Gaps = 59/747 (7%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L+ C   + L  GK +HS+  +S  +       +  + ++  CG L   R+ F  I + 
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKS-FIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP 72

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
            VF +N ++  Y+K     ES  L                                  AH
Sbjct: 73  NVFSFNAIIAAYAK-----ESRPLI---------------------------------AH 94

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           +LFD++ + D+VS+N +IS Y   G     L +F  M  +G ++D  T+  V++ C  C 
Sbjct: 95  QLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITAC--CD 152

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE-RSVVSWTSMI 340
            +     +H+ A+ + F   +S NN LL  Y K GDLD A RVF  MG  R  VSW SMI
Sbjct: 153 DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
             Y +      A+ LF+ MVR G+  D++ + S+L A  C   L  G   H  + +    
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272

Query: 401 SSLYVSNALMDMYAKCGS-MADAESVFNQMPVKDIVSWNTMIG-----------ALDLFV 448
            + +V + L+D+Y+KCG  M+D   VF ++   D+V WNTM+            AL+ F 
Sbjct: 273 QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFR 332

Query: 449 AMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR-NVANAIVDMYVKC 506
            M    + P+  +  C++ AC++L++  +G++IH   L+  I ++R +V NA++ MY KC
Sbjct: 333 QMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC 392

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G L  AR LFD +   + +S   MIAGY  HG   +++  F  M +  I P  ++FISVL
Sbjct: 393 GNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            AC+H+G V+EGW +FNMM+ + NIEP+ EHY+CM+DLL R G LSEA   I  MP  P 
Sbjct: 453 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPG 512

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
           +  W SLL  CR H  ++LA K A  V +LEP N   YV+L+N+YA A +WEEV  +R+ 
Sbjct: 513 SIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKF 572

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +  RG+KK PGCSWIE+K ++++FVA  SSHP  K+I   L+ +  +MKR GY P  R+A
Sbjct: 573 MRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWA 632

Query: 747 LINADEM---EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
           L+  D     EKE+ L  HSEKLA+AFG+++   G+ + V KNLR+CGDCH   KF+S  
Sbjct: 633 LVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAI 692

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
           A REI +RD++RFH FK+G+CSC  +W
Sbjct: 693 AGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 12/241 (4%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           ++  ++  C++L S   GK++HS+  +S I  +   + + L+ M+  CG+L++ RR+F++
Sbjct: 345 SFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDR 404

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +        N ++  Y++ G   ESL+LF+ M    IA  S TF  VL   A  G   RV
Sbjct: 405 MAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTG---RV 461

Query: 218 KDAHKLFDELSDR-----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           ++    F+ + ++     +   ++CMI      G A K  E    +  + FN       +
Sbjct: 462 EEGWNYFNMMKEKFNIEPEAEHYSCMIDLL---GRAGKLSEAENLIARMPFNPGSIGWAS 518

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  C   G +          L+   S    +   L +MY+  G  +    V + M +R 
Sbjct: 519 LLGACRTHGNIELAVKAANQVLQLEPSNAAPY-VVLSNMYASAGRWEEVATVRKFMRDRG 577

Query: 333 V 333
           V
Sbjct: 578 V 578


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 270/664 (40%), Positives = 394/664 (59%), Gaps = 41/664 (6%)

Query: 208 LAVVGNSRRVKDAHKLFDEL-SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
           L++  N   + D+  +F+ L S    ++W  +I  Y ++G+    L  F +ML  G   D
Sbjct: 46  LSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPD 105

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD------- 319
                +VL  C     L FG +VH   ++     ++   N L++MYSK   L+       
Sbjct: 106 HNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKK 165

Query: 320 ---------------------GAIR-VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
                                G++R VFE M +R +VSW ++I+G A+ G+ + A+ + R
Sbjct: 166 VFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVR 225

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M    + PD + ++S+L   A    L  GK++H Y   N   + +++ ++L+DMYAKC 
Sbjct: 226 EMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCT 285

Query: 418 SMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNFEPDGVTMACILP 466
            + D+  VF  +P  D +SWN++I            L  F  ML    +P+ V+ + I+P
Sbjct: 286 RVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMP 345

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
           ACA L  L  G+++HGYI+R     +  +A+A+VDMY KCG +  AR +FD +   D++S
Sbjct: 346 ACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVS 405

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           WT MI GY +HG   DAI+ F  M   G++P+ V+F++VL ACSH+GLVDE W++FN M 
Sbjct: 406 WTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMT 465

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
            +  I P LEHYA + DLL R G L EAY FI  M + P  ++W +LL  CR+H  ++LA
Sbjct: 466 QDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELA 525

Query: 647 EKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGK 706
           EKV++ +F ++P N G YVLL+N+Y+ A +W++ +KLR  +  +G+KK P CSWIEIK K
Sbjct: 526 EKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNK 585

Query: 707 VNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKL 766
           V+ FVAG  SHP+  +I   LK L  +M+REGY   T   L + +E +K   LC HSE+L
Sbjct: 586 VHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERL 645

Query: 767 AMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           A+ FGI++ PAG TIRVTKNLRVC DCH   KF+SK   REIV+RD++RFHHFKDG+CSC
Sbjct: 646 AITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSC 705

Query: 827 RGFW 830
             FW
Sbjct: 706 GDFW 709



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 197/386 (51%), Gaps = 52/386 (13%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D   + S+L+ C  +K L  G+ VH  I   G+  D             TC         
Sbjct: 105 DHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFD-----------LYTC--------- 144

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
                       N LM+ YSK  + +E +  +KK+   G  +D Y  S   K    +G+ 
Sbjct: 145 ------------NALMNMYSKFWSLEE-VNTYKKVFDEGKTSDVY--SKKEKESYYLGSL 189

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           R+V      F+ +  RD+VSWN +ISG   NG+ E  L + +EM N     D  T+ +VL
Sbjct: 190 RKV------FEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 243

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
              A    L+ G+ +H +A++  +  ++   ++L+DMY+KC  +D + RVF  + +   +
Sbjct: 244 PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGI 303

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW S+IAG  + G+FD  ++ F+ M+   I+P+  + +SI+ ACA    L +GK +H YI
Sbjct: 304 SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 363

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GAL 444
             +    ++++++AL+DMYAKCG++  A  +F++M + D+VSW  MI           A+
Sbjct: 364 IRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAI 423

Query: 445 DLFVAM-LQNFEPDGVTMACILPACA 469
            LF  M ++  +P+ V    +L AC+
Sbjct: 424 SLFKRMEVEGVKPNYVAFMAVLTACS 449



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 87/393 (22%), Positives = 148/393 (37%), Gaps = 74/393 (18%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D+ T  S+L + A+  +L  GK++H     +G   D   +GS L+ M+  C  + +  RV
Sbjct: 235 DSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDAD-VFIGSSLIDMYAKCTRVDDSCRV 293

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----- 209
           F  +       WN ++    + G F E L  F++M    I  +  +FS ++   A     
Sbjct: 294 FYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTL 353

Query: 210 --------VVGNSR-------------------RVKDAHKLFDELSDRDVVSWNCMISGY 242
                    +  SR                    ++ A  +FD++   D+VSW  MI GY
Sbjct: 354 HLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGY 413

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             +G A   + +FK M   G   +    + VL+ C++ G +                +  
Sbjct: 414 ALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLV---------------DEAW 458

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
            + N++   Y     L+    V + +G               R G  + A      M   
Sbjct: 459 KYFNSMTQDYRIIPGLEHYAAVADLLG---------------RVGRLEEAYEFISDM--- 500

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS-SLYVSNALMDMYAKCGSMAD 421
            IEP     +++L AC     +E+ + V   +   D Q+   YV   L ++Y+  G   D
Sbjct: 501 HIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYV--LLSNIYSAAGRWKD 558

Query: 422 AESVF-----NQMPVKDIVSWNTMIGALDLFVA 449
           A  +        M  K   SW  +   +  FVA
Sbjct: 559 ARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVA 591



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 8/141 (5%)

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG--VLGSKLVFMFVTCGDL 148
           K K +  ++ SI+  CA L +L  GK++H  I  S     DG   + S LV M+  CG++
Sbjct: 332 KIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF---DGNVFIASALVDMYAKCGNI 388

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           +  R +F+K++   +  W  ++  Y+  G+  +++ LFK+M+  G+  +   F  VL   
Sbjct: 389 RTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTAC 448

Query: 209 AVVGNSRRVKDAHKLFDELSD 229
           +  G    V +A K F+ ++ 
Sbjct: 449 SHAG---LVDEAWKYFNSMTQ 466


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 272/701 (38%), Positives = 410/701 (58%), Gaps = 43/701 (6%)

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-------------------------- 206
           ++K G++      F+++   G   D+YT   V++                          
Sbjct: 5   FAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLD 64

Query: 207 ---CLAVVG---NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
              C A+V      R ++DA  LFD++ +RD+V+W  MI GY   G A + L +F++M  
Sbjct: 65  HFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE 124

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
            G   D   MVTV+  CA  GA+   R +  +  +  F  ++     ++DMY+KCG ++ 
Sbjct: 125 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVES 184

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A  +F++M E++V+SW++MIA Y   G    A+ LFR M+  G+ PD   + S+L+AC+ 
Sbjct: 185 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSD 244

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              L++G+ +H  + +  +    +V  AL+DMY KC  + DA  +F++MP +D+V+W  M
Sbjct: 245 LKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVM 304

Query: 441 IG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
           IG          +L LF  M +    PD V M  ++ ACA L A+ + R I  YI R   
Sbjct: 305 IGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKF 364

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             D  +  A++DM+ KCG +  AR +FD +  K++ISW+ MIA YG HG G  A+  F  
Sbjct: 365 QLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPM 424

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M ++GI P++++ +S+LYACSH+GLV+EG RFF++M  + ++   ++HY C+VDLL R G
Sbjct: 425 MLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAG 484

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
            L EA + IE M V  D  +WG+ L  CR H +V LAEK A  + EL+P N G+Y+LL+N
Sbjct: 485 RLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSN 544

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           +YA A +WE+V K R+ +S+R LKK PG +WIE+  K + F  G ++HP +K+I  +LK 
Sbjct: 545 IYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKS 604

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
           L  +++  GY P T + L + DE  K   L  HSEKLA+AFG++  P    IR+ KNLRV
Sbjct: 605 LGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRV 664

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CGDCH   K +S    R I++RD+NRFHHFK+G CSC  +W
Sbjct: 665 CGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 124/347 (35%), Positives = 195/347 (56%), Gaps = 11/347 (3%)

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+ G+   G        F+E++  G   D  T+  V+  C +   L  GR +H    K  
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
              +      L+DMY KC +++ A  +F+KM ER +V+WT MI GYA  G  + ++ LF 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M  EG+ PD  A+ +++ ACA  G +   + + DYI+    Q  + +  A++DMYAKCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILP 466
            +  A  +F++M  K+++SW+ MI           ALDLF  ML +   PD +T+A +L 
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
           AC+ L  L+ GR IH  + + G+  D  V  A+VDMY KC  +  AR LFD +P +DL++
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
           WT+MI GY   G   +++  F+ MR+ G+ PD+V+ ++V++AC+  G
Sbjct: 301 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLG 347



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 246/491 (50%), Gaps = 46/491 (9%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           ++ D  T   +++ C DLK+L+ G+ +H I+ + G+ +D  V  + LV M+V C ++++ 
Sbjct: 26  ARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAA-LVDMYVKCREIEDA 84

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
           R +F+K+    +  W +++  Y++ G   ESL LF+KM+  G+  D      V+   A +
Sbjct: 85  RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKL 144

Query: 212 GNSRR--------------------------------VKDAHKLFDELSDRDVVSWNCMI 239
           G   +                                V+ A ++FD + +++V+SW+ MI
Sbjct: 145 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 204

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           + Y  +G   K L++F+ ML+ G   D  T+ ++L  C++   L  GR +H    K    
Sbjct: 205 AAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLD 264

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +      L+DMY KC +++ A  +F+KM ER +V+WT MI GYA  G  + ++ LF  M
Sbjct: 265 LDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKM 324

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             EG+ PD  A+ +++ ACA  G +   + + DYI+    Q  + +  A++DM+AKCG +
Sbjct: 325 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 384

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPAC 468
             A  +F++M  K+++SW+ MI           ALDLF  ML++   P+ +T+  +L AC
Sbjct: 385 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 444

Query: 469 ASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFD-MIPAKDLIS 526
           +    +E G      +   + + AD      +VD+  + G L  A  L + M   KD   
Sbjct: 445 SHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGL 504

Query: 527 WTIMIAGYGMH 537
           W   +     H
Sbjct: 505 WGAFLGACRTH 515



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 165/311 (53%), Gaps = 17/311 (5%)

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           M+ G+A+ G +      FR ++R G  PD Y +  ++ AC     L++G+ +H  + +  
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFV 448
           +    +V  AL+DMY KC  + DA  +F++M  +D+V+W  MIG          +L LF 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 449 AMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            M +    PD V M  ++ ACA L A+ + R I  YI R     D  +  A++DMY KCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            +  AR +FD +  K++ISW+ MIA YG HG G  A+  F  M  +G+ PD+++  S+LY
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC--MVDLLSRTGNLSEAYRFIEMMPVAP 625
           ACS    +  G R  + + Y+  ++  L+H+ C  +VD+  +   + +A    + MP   
Sbjct: 241 ACSDLKNLQMG-RLIHHIVYKFGLD--LDHFVCAALVDMYGKCREIEDARFLFDKMP-ER 296

Query: 626 DATIWGSLLCG 636
           D   W  ++ G
Sbjct: 297 DLVTWTVMIGG 307



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 202/418 (48%), Gaps = 43/418 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSK-----IDTKTYCSILQLCADLKSLEDGKKVH 119
            +   IG + E G   KA E L   EK +      D     +++  CA L ++   + + 
Sbjct: 98  TWTVMIGGYAECG---KANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIID 154

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
             I      +D  +LG+ ++ M+  CG ++  R +F++++   V  W+ ++  Y   G  
Sbjct: 155 DYIQRKKFQLD-VILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQG 213

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLK-----------------------------CLAV 210
           +++L LF+ M S G+  D  T + +L                              C A+
Sbjct: 214 RKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAAL 273

Query: 211 V---GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           V   G  R ++DA  LFD++ +RD+V+W  MI GY   G A + L +F +M   G   D 
Sbjct: 274 VDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDK 333

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
             MVTV+  CA  GA+   R +  +  +  F  ++     ++DM++KCG ++ A  +F++
Sbjct: 334 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDR 393

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M E++V+SW++MIA Y   G    A+ LF  M+R GI P+   + S+L+AC+  GL+E G
Sbjct: 394 MEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEG 453

Query: 388 KDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
                 + E+  +++ +     ++D+  + G + +A  +   M V KD   W   +GA
Sbjct: 454 LRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 511


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/649 (41%), Positives = 390/649 (60%), Gaps = 50/649 (7%)

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           +V  WN +I     NG+  + L ++ E   +    D  T  +V++ CA        +++H
Sbjct: 79  NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 138

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
              L   F  ++   N L+DMY +  DLD A +VFE+M  R VVSW S+I+GY   G ++
Sbjct: 139 DRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWN 198

Query: 351 GA-------IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
            A       I+LF  MV +  +PD+  ITSIL AC   G LE GK VHDY+  +  +   
Sbjct: 199 EALEIYYQSIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDT 257

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM--- 450
             SN L++MYAKCG++  ++ VF+ M  KD VSWN+MI           +L +F  M   
Sbjct: 258 TASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKAR 317

Query: 451 -----------------------------LQNFEPDGVTMACILPACASLAALERGREIH 481
                                         +   PD  TM  ILP C+ LAA  +G+EIH
Sbjct: 318 DIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIH 377

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
           G I + G+ +D  V N +++MY KCG L  +  +F ++  KD+++WT +I+  GM+G G 
Sbjct: 378 GCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGK 437

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
            A+  F +M  AGI PD V+F+++++ACSHSGLV+EG  +F+ M+ +  IEP++EHYAC+
Sbjct: 438 KAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACV 497

Query: 602 VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNT 661
           VDLLSR+  L +A  FI  MP+ PD++IWG+LL  CR+  + ++AE+V+E + EL PD+T
Sbjct: 498 VDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDT 557

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK 721
           GYYVL++N+YA   KW++V+ +R+ I  RGLKK+PGCSW+EI+ KV +F  G       +
Sbjct: 558 GYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFE 617

Query: 722 KIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
           ++  LL  L   M +EGY    ++ L + DE EK   LCGHSE+LA+AFG+LN   G  +
Sbjct: 618 EVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPL 677

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +V KNLRVC DCH + K++SK  +RE+++RD+NRFH FKDG CSC  +W
Sbjct: 678 QVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 155/575 (26%), Positives = 251/575 (43%), Gaps = 95/575 (16%)

Query: 81  KAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF 140
           K + VL+   +  +    + SI +  A   +     K+HS+I   G+     +  +KL+ 
Sbjct: 2   KTLRVLHECSRQTL----FSSISRALASAATTTQLHKLHSLIITLGLH-HSVIFSAKLIA 56

Query: 141 MFVTCGDLKEGRRVFNKID-NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSY 199
            +    D      VF     +  V++WN ++   +  G F E+L L+ + Q + +  D+Y
Sbjct: 57  KYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTY 116

Query: 200 TFSCVLKCLA------------------------VVGNSR-----RVKD---AHKLFDEL 227
           TF  V+   A                         +GN+      R  D   A K+F+E+
Sbjct: 117 TFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEM 176

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEV-------FKEMLNLGFNVDLATMVTVLSGCANC 280
             RDVVSWN +ISGY ANG   + LE+       F EM+N  F  DL T+ ++L  C + 
Sbjct: 177 PLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVN-QFKPDLLTITSILQACGHL 235

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
           G L FG+ VH + + + +  + + +N L++MY+KCG+L  +  VF  M  +  VSW SMI
Sbjct: 236 GDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMI 295

Query: 341 AGYAREG-------VFDG------------------------AIRLFRGMVREGIEPDVY 369
             Y + G       VF+                          +R+   M  EG+ PD+ 
Sbjct: 296 NVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMA 355

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            + SIL  C+       GK++H  I +  ++S + V N L++MY+KCGS+ ++  VF  M
Sbjct: 356 TMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLM 415

Query: 430 PVKDIVSWNTMIGALDLF------VAMLQNFE-----PDGVTMACILPACASLAALERGR 478
             KD+V+W  +I A  ++      V      E     PD V    I+ AC+    +E G 
Sbjct: 416 KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGL 475

Query: 479 E-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGM 536
              H     + I         +VD+  +  +L  A      +P K D   W  +++   M
Sbjct: 476 NYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRM 535

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSF---ISVLYA 568
              G   IA     R   + PD+  +   +S +YA
Sbjct: 536 S--GDTEIAERVSERIIELNPDDTGYYVLVSNIYA 568



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 191/409 (46%), Gaps = 55/409 (13%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREG 347
           +H+  +       + F+  L+  Y+   D   +  VF       +V  W S+I      G
Sbjct: 35  LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL--EIGKDVHDYIKENDMQSSLYV 405
           +F  A+ L+    R  ++PD Y   S+++ACA  GLL  E+ K +HD + +    S LY+
Sbjct: 95  LFSEALSLYSETQRIRLQPDTYTFPSVINACA--GLLDFEMAKSIHDRVLDMGFGSDLYI 152

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-----------------ALDLFV 448
            NAL+DMY +   +  A  VF +MP++D+VSWN++I                  ++ LF+
Sbjct: 153 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFM 212

Query: 449 AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
            M+  F+PD +T+  IL AC  L  LE G+ +H Y++  G   D   +N +++MY KCG 
Sbjct: 213 EMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 272

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND------------------- 549
           L+ ++ +F  +  KD +SW  MI  Y  +G   D++  F +                   
Sbjct: 273 LLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHS 332

Query: 550 ------------MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
                       MR  G+ PD  + +S+L  CS      +G      + ++  +E  +  
Sbjct: 333 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCI-FKLGLESDVPV 391

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
              ++++ S+ G+L  +++  ++M    D   W +L+  C ++ E K A
Sbjct: 392 GNVLIEMYSKCGSLRNSFQVFKLMK-TKDVVTWTALISACGMYGEGKKA 439



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 197/451 (43%), Gaps = 74/451 (16%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ I      G   +A+ +   +++ ++  DT T+ S++  CA L   E  K +H  + 
Sbjct: 83  WNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVL 142

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G    D  +G+ L+ M+    DL + R+VF ++    V  WN L+  Y+  G + E+L
Sbjct: 143 DMGFG-SDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEAL 201

Query: 184 YLFKKMQSL------GIAADSYTFSCVLKCLAVVGN---SRRVKD--------------- 219
            ++ +   L          D  T + +L+    +G+    + V D               
Sbjct: 202 EIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN 261

Query: 220 --------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM------- 258
                         + ++F  +  +D VSWN MI+ YI NG     L+VF+ M       
Sbjct: 262 ILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIIT 321

Query: 259 -------------LNLGFNV-----------DLATMVTVLSGCANCGALMFGRAVHAFAL 294
                         NLG  +           D+ATM+++L  C+   A   G+ +H    
Sbjct: 322 WNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIF 381

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           K     ++   N L++MYSKCG L  + +VF+ M  + VV+WT++I+     G    A+R
Sbjct: 382 KLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVR 441

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKD-VHDYIKENDMQSSLYVSNALMDMY 413
            F  M   GI PD  A  +I+ AC+  GL+E G +  H   K+  ++  +     ++D+ 
Sbjct: 442 AFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLL 501

Query: 414 AKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           ++   +  AE     MP+K D   W  ++ A
Sbjct: 502 SRSALLDKAEDFILSMPLKPDSSIWGALLSA 532



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 162/413 (39%), Gaps = 68/413 (16%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--------EKSKIDTKTYCSILQLCADLKSLEDGK 116
           ++N+ I  +   G   +A+E+ Y S         + K D  T  SILQ C  L  LE GK
Sbjct: 183 SWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGK 242

Query: 117 KVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
            VH  +  SG   D     + L+ M+  CG+L   + VF+ +       WN +++ Y + 
Sbjct: 243 YVHDYMITSGYECDTTA-SNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQN 301

Query: 177 GNFKESLYLFK-------------------------------KMQSLGIAADSYTFSCVL 205
           G   +SL +F+                               +M++ G+  D  T   +L
Sbjct: 302 GKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSIL 361

Query: 206 KCLAVVGNSRRVKDAHKLFDELS-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
              +++   R+ K+ H    +L  + DV   N +I  Y   G      +VFK M      
Sbjct: 362 PVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMK----T 417

Query: 265 VDLATMVTVLSGCANCGALMFG---RAVHAFA---LKACFSKEISFNNTLLDMYSKCGDL 318
            D+ T   ++S C      M+G   +AV AF            ++F   +    S  G +
Sbjct: 418 KDVVTWTALISACG-----MYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFAC-SHSGLV 471

Query: 319 DGAIRVFEKMG-----ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
           +  +  F +M      E  +  +  ++   +R  + D A      M    ++PD     +
Sbjct: 472 EEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSM---PLKPDSSIWGA 528

Query: 374 ILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAESV 425
           +L AC   G  EI + V + I E N   +  YV   + ++YA  G      S+
Sbjct: 529 LLSACRMSGDTEIAERVSERIIELNPDDTGYYV--LVSNIYAALGKWDQVRSI 579


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/628 (42%), Positives = 396/628 (63%), Gaps = 13/628 (2%)

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTV 273
           RR  DA ++FD +  RD V+WN +++GY  NG+AE  + +   M    G   D  T+V+V
Sbjct: 274 RRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSV 333

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L  CA+  AL   R VHAFA++  F ++++ +  +LD+Y KCG +D A +VF+ M +R+ 
Sbjct: 334 LPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNS 393

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSW +MI GYA  G    A+ LF+ MV EG++    ++ + LHAC   G L+ G+ VH+ 
Sbjct: 394 VSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHEL 453

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GA 443
           +    ++S++ V NAL+ MY KC     A  VF+++  K  VSWN MI           A
Sbjct: 454 LVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDA 513

Query: 444 LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           + LF  M L+N +PD  T+  I+PA A ++   + R IHGY +R  +  D  V  A++DM
Sbjct: 514 VRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 573

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG + +ARSLF+    + +I+W  MI GYG HG G  A+  F +M+ +G  P+E +F
Sbjct: 574 YAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTF 633

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           +SVL ACSH+GLVDEG  +F+ M+ +  +EP +EHY  MVDLL R G L EA+ FI+ MP
Sbjct: 634 LSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP 693

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + P  +++G++L  C++H  V+LAE+ A+ +FELEP+   Y+VLLAN+YA A  W++V +
Sbjct: 694 MEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVAR 753

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R  + ++GL+K PG S +++K +++ F +G ++H  AK I + L +L  E+K  GY P 
Sbjct: 754 VRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPD 813

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           T       D+++ ++ L  HSEKLA+A+G++    G TI++ KNLRVC DCH   K +S 
Sbjct: 814 TDSIHDVEDDVKAQL-LNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISL 872

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REI++RD  RFHHFKDG+CSC  +W
Sbjct: 873 VTGREIIMRDIQRFHHFKDGKCSCGDYW 900



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 228/487 (46%), Gaps = 47/487 (9%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           +T+ S+L+LCA    L  G+ VH+ +   G+   + +  + L  M+  C    + RRVF+
Sbjct: 226 RTFTSLLKLCAARADLATGRAVHAQLAARGLS-PEALAATALANMYAKCRRPGDARRVFD 284

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL-GIAADSYTFSCVLKCLA---VVG 212
           ++       WN L+  Y++ G  + ++ +  +MQ   G   D+ T   VL   A    +G
Sbjct: 285 RMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALG 344

Query: 213 NSRR-----------------------------VKDAHKLFDELSDRDVVSWNCMISGYI 243
             R                              V  A K+FD + DR+ VSWN MI GY 
Sbjct: 345 ACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYA 404

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            NG A + L +FK M+  G +V   +++  L  C   G L  GR VH   ++      ++
Sbjct: 405 ENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVN 464

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N L+ MY KC   D A +VF+++G ++ VSW +MI G  + G  + A+RLF  M  E 
Sbjct: 465 VMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLEN 524

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           ++PD + + SI+ A A        + +H Y     +   +YV  AL+DMYAKCG ++ A 
Sbjct: 525 VKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIAR 584

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLA 472
           S+FN    + +++WN MI           A++LF  M  + + P+  T   +L AC+   
Sbjct: 585 SLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAG 644

Query: 473 ALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIM 530
            ++ G+E    +   +G+         +VD+  + G L  A S    +P +  IS +  M
Sbjct: 645 LVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAM 704

Query: 531 IAGYGMH 537
           +    +H
Sbjct: 705 LGACKLH 711



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 163/314 (51%), Gaps = 12/314 (3%)

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
           L T  ++L  CA    L  GRAVHA       S E      L +MY+KC     A RVF+
Sbjct: 225 LRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFD 284

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLE 385
           +M  R  V+W +++AGYAR G+ + A+ +   M  E G  PD   + S+L ACA    L 
Sbjct: 285 RMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALG 344

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
             ++VH +         + VS A++D+Y KCG++  A  VF+ M  ++ VSWN MI    
Sbjct: 345 ACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYA 404

Query: 443 -------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  AL LF  M+ +  +   V++   L AC  L  L+ GR +H  ++R G+ ++ N
Sbjct: 405 ENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVN 464

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V NA++ MY KC    LA  +FD +  K  +SW  MI G   +G   DA+  F+ M+   
Sbjct: 465 VMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLEN 524

Query: 555 IEPDEVSFISVLYA 568
           ++PD  + +S++ A
Sbjct: 525 VKPDSFTLVSIIPA 538



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 197/419 (47%), Gaps = 40/419 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +NA +  +   G  E A+ +   +   +  + D  T  S+L  CAD ++L   ++VH+  
Sbjct: 294 WNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFA 353

Query: 123 CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
              G   D+ V + + ++ ++  CG +   R+VF+ + +     WN ++  Y++ G+  E
Sbjct: 354 VRGGF--DEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATE 411

Query: 182 SLYLFKKMQSLGI-AADSYTFSCVLKC--LAVVGNSRRVKD------------------- 219
           +L LFK+M   G+   D    + +  C  L  +   RRV +                   
Sbjct: 412 ALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALIT 471

Query: 220 ----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                     A ++FDEL  +  VSWN MI G   NG +E  + +F  M       D  T
Sbjct: 472 MYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFT 531

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V+++   A+    +  R +H ++++    +++     L+DMY+KCG +  A  +F    
Sbjct: 532 LVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSAR 591

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           +R V++W +MI GY   G    A+ LF  M   G  P+     S+L AC+  GL++ G++
Sbjct: 592 DRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQE 651

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALDL 446
               +KE+  ++  +     ++D+  + G + +A S   +MP++  +S +  M+GA  L
Sbjct: 652 YFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKL 710



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 129/248 (52%), Gaps = 13/248 (5%)

Query: 351 GAIRLFRGM-VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
           GA+  F  M    G  P +   TS+L  CA    L  G+ VH  +    +      + AL
Sbjct: 207 GALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATAL 266

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNFE------PD 457
            +MYAKC    DA  VF++MP +D V+WN ++      G  +  V M+   +      PD
Sbjct: 267 ANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPD 326

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
            VT+  +LPACA   AL   RE+H + +R G     NV+ AI+D+Y KCG +  AR +FD
Sbjct: 327 AVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFD 386

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            +  ++ +SW  MI GY  +G   +A+A F  M   G++  +VS ++ L+AC   G +DE
Sbjct: 387 GMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDE 446

Query: 578 GWRFFNMM 585
           G R   ++
Sbjct: 447 GRRVHELL 454



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 6/269 (2%)

Query: 431 VKDIVSWNTMIGALDLFVAM--LQNFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           ++   S + + GAL  F AM       P   T   +L  CA+ A L  GR +H  +   G
Sbjct: 196 LRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARG 255

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
           +S +   A A+ +MY KC     AR +FD +PA+D ++W  ++AGY  +G    A+    
Sbjct: 256 LSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVV 315

Query: 549 DMRQA-GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
            M++  G  PD V+ +SVL AC+ +  +    R  +        + ++     ++D+  +
Sbjct: 316 RMQEEDGERPDAVTLVSVLPACADAQALG-ACREVHAFAVRGGFDEQVNVSTAILDVYCK 374

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            G +  A +  + M    ++  W +++ G   + +   A  + + +     D T   VL 
Sbjct: 375 CGAVDSARKVFDGMQ-DRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLA 433

Query: 668 A-NVYAEAEKWEEVKKLREKISRRGLKKN 695
           A +   E    +E +++ E + R GL+ N
Sbjct: 434 ALHACGELGFLDEGRRVHELLVRIGLESN 462



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 6/171 (3%)

Query: 46  CTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYSS---EKSKIDTKTYCS 101
           C    ++A +   L  KT+ ++NA I    + G+ E A+  L+S    E  K D+ T  S
Sbjct: 476 CKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVR-LFSRMQLENVKPDSFTLVS 534

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           I+   AD+      + +H       +  D  VL + L+ M+  CG +   R +FN   + 
Sbjct: 535 IIPALADISDPLQARWIHGYSIRLHLDQDVYVL-TALIDMYAKCGRVSIARSLFNSARDR 593

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            V  WN ++H Y   G+ K ++ LF++M+S G   +  TF  VL   +  G
Sbjct: 594 HVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAG 644


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 287/747 (38%), Positives = 420/747 (56%), Gaps = 59/747 (7%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L+ C   + L  GK +HS+  +S  +       +  + ++  CG L   R+ F  I + 
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKS-FIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP 72

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
            VF +N ++  Y+K     ES  L                                  AH
Sbjct: 73  NVFSFNAIIAAYAK-----ESRPLI---------------------------------AH 94

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           +LFD++ + D+VS+N +IS Y   G     L +F  M  +G ++D  T+  V++ C  C 
Sbjct: 95  QLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITAC--CD 152

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE-RSVVSWTSMI 340
            +     +H+ A+ + F   +S NN LL  Y K GDLD A RVF  MG  R  VSW SMI
Sbjct: 153 DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
             Y +      A+ LF+ MVR G+  D++ + S+L A  C   L  G   H  + +    
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272

Query: 401 SSLYVSNALMDMYAKCGS-MADAESVFNQMPVKDIVSWNTMIG-----------ALDLFV 448
            + +V + L+D+Y+KCG  M+D   VF ++   D+V WNTM+            AL+ F 
Sbjct: 273 QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFR 332

Query: 449 AMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR-NVANAIVDMYVKC 506
            M    + P+  +  C++ AC++L++  +G++IH   L+  I ++R +V NA++ MY KC
Sbjct: 333 QMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC 392

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G L  AR LFD +   + +S   MIAGY  HG   +++  F  M +  I P  ++FISVL
Sbjct: 393 GNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            AC+H+G V+EGW +FNMM+ + NIEP+ EHY+CM+DLL R G LSEA   I  MP  P 
Sbjct: 453 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPG 512

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
           +  W SLL  CR H  ++LA K A  V +LEP N   YV+L+N+YA A +WEEV  +R+ 
Sbjct: 513 SIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKF 572

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +  RG+KK PGCSWIE+K ++++FVA  SSHP  K+I   L+ +  +MKR GY P  R+A
Sbjct: 573 MRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWA 632

Query: 747 LINADEM---EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
           L+  D     EKE+ L  HSEKLA+AFG+++   G+ + V KNLR+CGDCH   KF+S  
Sbjct: 633 LVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAI 692

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
           A REI +RD++RFH FK+G+CSC  +W
Sbjct: 693 AGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 12/241 (4%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           ++  ++  C++L S   GK++HS+  +S I  +   + + L+ M+  CG+L++ RR+F++
Sbjct: 345 SFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDR 404

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +        N ++  Y++ G   ESL+LF+ M    IA  S TF  VL   A  G   RV
Sbjct: 405 MAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTG---RV 461

Query: 218 KDAHKLFDELSDR-----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           ++    F+ + ++     +   ++CMI      G A K  E    +  + FN       +
Sbjct: 462 EEGWNYFNMMKEKFNIEPEAEHYSCMIDLL---GRAGKLSEAENLIARMPFNPGSIGWAS 518

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  C   G +          L+   S    +   L +MY+  G  +    V + M +R 
Sbjct: 519 LLGACRTHGNIELAVKAANQVLQLEPSNAAPY-VVLSNMYASAGRWEEVATVRKFMRDRG 577

Query: 333 V 333
           V
Sbjct: 578 V 578


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 278/776 (35%), Positives = 434/776 (55%), Gaps = 44/776 (5%)

Query: 98   TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
            TY + L+ C+    LE GK+VH+   + G    D  +GS LV ++  CG++    RVF  
Sbjct: 231  TYATALKACSMCLDLEFGKQVHAEAIKVGD-FSDLFVGSALVDLYAKCGEMVLAERVFLC 289

Query: 158  IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
            +       WN L++ +++ G+ ++ L LF +M    I    +T S VLK  A  GN R  
Sbjct: 290  MPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAG 349

Query: 218  K--------------------------------DAHKLFDELSDRDVVSWNCMISGYIAN 245
            +                                DA K+F  + D DVVSW+ +I+     
Sbjct: 350  QIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQK 409

Query: 246  GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
            G + +  EVFK M + G   +  T+ +++S   + G L +G ++HA   K  F  + +  
Sbjct: 410  GQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVC 469

Query: 306  NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
            N L+ MY K G +    RVFE    R ++SW ++++G+      D  +R+F  M+ EG  
Sbjct: 470  NALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFN 529

Query: 366  PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
            P++Y   SIL +C+    +++GK VH  I +N +  + +V  AL+DMYAK   + DAE++
Sbjct: 530  PNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETI 589

Query: 426  FNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAAL 474
            FN++  +D+ +W  ++           A+  F+ M  +  +P+  T+A  L  C+ +A L
Sbjct: 590  FNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATL 649

Query: 475  ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
            + GR++H   ++ G S D  VA+A+VDMY KCG +  A  +FD + ++D +SW  +I GY
Sbjct: 650  DSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGY 709

Query: 535  GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
              HG G  A+  F  M   G  PDEV+FI VL ACSH GL++EG + FN +     I P 
Sbjct: 710  SQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPT 769

Query: 595  LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
            +EHYACMVD+L R G   E   FIE M +  +  IW ++L  C++H  ++  E+ A  +F
Sbjct: 770  IEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLF 829

Query: 655  ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG 714
            ELEP+    Y+LL+N++A    W++V  +R  +S RG+KK PGCSW+E+ G+V++F++  
Sbjct: 830  ELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHD 889

Query: 715  SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
             SHP  ++I   L+ L  ++   GY P T + L N  + EK+  L  HSE+LA+AF +L+
Sbjct: 890  GSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLS 949

Query: 775  LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
                +TIR+ KNLR+CGDCH+  K +S+   +E+V+RD N FHHFK+G CSC+ FW
Sbjct: 950  TSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 176/622 (28%), Positives = 305/622 (49%), Gaps = 48/622 (7%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           SK   + Y  +L+ CA    L +GK +H  + +SGI  D  +  S LV ++  CG     
Sbjct: 124 SKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNS-LVNVYAKCGSANYA 182

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK----C 207
            +VF +I    V  W  L+  +   G    ++ LF +M+  G+ A+ +T++  LK    C
Sbjct: 183 CKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMC 242

Query: 208 L------AVVGNSRRVKD----------------------AHKLFDELSDRDVVSWNCMI 239
           L       V   + +V D                      A ++F  +  ++ VSWN ++
Sbjct: 243 LDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALL 302

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           +G+   G AEK L +F  M     N    T+ TVL GCAN G L  G+ VH+ A++    
Sbjct: 303 NGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCE 362

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +   +  L+DMYSKCG    A++VF ++ +  VVSW+++I    ++G    A  +F+ M
Sbjct: 363 LDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRM 422

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
              G+ P+ + + S++ A    G L  G+ +H  + +   +    V NAL+ MY K GS+
Sbjct: 423 RHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSV 482

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPAC 468
            D   VF     +D++SWN ++            L +F  ML + F P+  T   IL +C
Sbjct: 483 QDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSC 542

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           +SL+ ++ G+++H  I+++ +  +  V  A+VDMY K   L  A ++F+ +  +DL +WT
Sbjct: 543 SSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWT 602

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
           +++AGY   G G  A+  F  M++ G++P+E +  S L  CS    +D G R  + M  +
Sbjct: 603 VIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG-RQLHSMAIK 661

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
                 +   + +VD+ ++ G + +A    + + V+ D   W +++CG   H +   A K
Sbjct: 662 AGQSGDMFVASALVDMYAKCGCVEDAEVVFDGL-VSRDTVSWNTIICGYSQHGQGGKALK 720

Query: 649 VAEHVFE--LEPDNTGYYVLLA 668
             E + +    PD   +  +L+
Sbjct: 721 AFEAMLDEGTVPDEVTFIGVLS 742



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 267/521 (51%), Gaps = 48/521 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  F ++G+ EK + +      S+I+    T  ++L+ CA+  +L  G+ VHS+ 
Sbjct: 297 SWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLA 356

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G  +D+  +   LV M+  CG   +  +VF +I++  V  W+ ++    + G  +E+
Sbjct: 357 IRIGCELDE-FISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREA 415

Query: 183 LYLFKKMQSLGIAADSYTF--------------------SCVLK---------CLAVVGN 213
             +FK+M+  G+  + +T                     +CV K         C A+V  
Sbjct: 416 AEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTM 475

Query: 214 SRR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
             +   V+D  ++F+  ++RD++SWN ++SG+  N   + GL +F +ML  GFN ++ T 
Sbjct: 476 YMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTF 535

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           +++L  C++   +  G+ VHA  +K            L+DMY+K   L+ A  +F ++ +
Sbjct: 536 ISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIK 595

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R + +WT ++AGYA++G  + A++ F  M REG++P+ + + S L  C+    L+ G+ +
Sbjct: 596 RDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL 655

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--------- 441
           H    +      ++V++AL+DMYAKCG + DAE VF+ +  +D VSWNT+I         
Sbjct: 656 HSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQG 715

Query: 442 -GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANA 498
             AL  F AML +   PD VT   +L AC+ +  +E G++    + + +GI+        
Sbjct: 716 GKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYAC 775

Query: 499 IVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMHG 538
           +VD+  + G      S   +M    +++ W  ++    MHG
Sbjct: 776 MVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHG 816



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 227/443 (51%), Gaps = 17/443 (3%)

Query: 150 EGRRVFNKID---NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
           E +R++  +D    G++  ++ ++   +  G+  E   +  ++   GI  DS+ ++ ++ 
Sbjct: 112 EKKRIWRGLDFDSKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVN 171

Query: 207 CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
             A  G++     A K+F E+ +RDVVSW  +I+G++A G     + +F EM   G   +
Sbjct: 172 VYAKCGSANY---ACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEAN 228

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             T  T L  C+ C  L FG+ VHA A+K     ++   + L+D+Y+KCG++  A RVF 
Sbjct: 229 EFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFL 288

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
            M +++ VSW +++ G+A+ G  +  + LF  M    I    + ++++L  CA  G L  
Sbjct: 289 CMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRA 348

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD- 445
           G+ VH        +   ++S  L+DMY+KCG   DA  VF ++   D+VSW+ +I  LD 
Sbjct: 349 GQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQ 408

Query: 446 ---------LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                    +F  M  +   P+  T+A ++ A   L  L  G  IH  + ++G   D  V
Sbjct: 409 KGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTV 468

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            NA+V MY+K G +     +F+    +DLISW  +++G+  +      +  FN M   G 
Sbjct: 469 CNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGF 528

Query: 556 EPDEVSFISVLYACSHSGLVDEG 578
            P+  +FIS+L +CS    VD G
Sbjct: 529 NPNMYTFISILRSCSSLSDVDLG 551



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 21/274 (7%)

Query: 70  IGRFCEVGNLEKAME--VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           +  + + G  EKA++  +    E  K +  T  S L  C+ + +L+ G+++HS+  ++G 
Sbjct: 605 VAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ 664

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              D  + S LV M+  CG +++   VF+ + +     WN ++  YS+ G   ++L  F+
Sbjct: 665 S-GDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFE 723

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-----RDVVSWNCMISGY 242
            M   G   D  TF  VL   + +G    +++  K F+ LS        +  + CM+   
Sbjct: 724 AMLDEGTVPDEVTFIGVLSACSHMG---LIEEGKKHFNSLSKIYGITPTIEHYACMVDIL 780

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR--AVHAFALKACFSK 300
              G   + +E F E + L  NV +    TVL  C   G + FG   A+  F L+     
Sbjct: 781 GRAGKFHE-VESFIEEMKLTSNVLIWE--TVLGACKMHGNIEFGERAAMKLFELEP---- 833

Query: 301 EISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSV 333
           EI  N  LL +M++  G  D    V   M  R V
Sbjct: 834 EIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGV 867


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 289/774 (37%), Positives = 434/774 (56%), Gaps = 52/774 (6%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           ++ + C +L+S    K +H+ +  S   I +  + +KLV ++   G++   R  F+ I N
Sbjct: 59  TLFRYCTNLQS---AKCLHARLVVSN-AIQNVCISAKLVNLYCYLGNVALARYTFDHIHN 114

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKK-MQSLGIAADSYTFSCVLKCLAVVGNSRRVK- 218
             V+ WNL++  Y + G   E +  F   M S G+  D  TF  VLK    V +  ++  
Sbjct: 115 RDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHC 174

Query: 219 ----------------------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
                                       +A  LFDE+  RD+ SWN MISGY  +G A++
Sbjct: 175 LALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKE 234

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            L +   +  +    D  T+V++LS C   G    G  +H++++K     E+  +N L+D
Sbjct: 235 ALTLSDGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           +Y++ G L    +VF++M  R ++SW S+I  Y        AI LF+ M    I+PD   
Sbjct: 291 LYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLT 350

Query: 371 ITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           + S+    +  G +   + V  + +++      + + NA++ MYAK G +  A +VFN +
Sbjct: 351 LISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410

Query: 430 PVKDIVSWNTMI------GALDLFVAMLQNFEPDGV-------TMACILPACASLAALER 476
           P KD++SWNT+I      G     + M    E +G        T   +LPAC+   AL +
Sbjct: 411 PNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQ 470

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           G ++HG +L++G+  D  V  ++ DMY KCG L  A SLF  IP  + + W  +IA +G 
Sbjct: 471 GMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGF 530

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG G  A+  F +M   G++PD ++F+++L ACSHSGLVDEG   F MM+ +  I P L+
Sbjct: 531 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLK 590

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HY CMVDL  R G L  A  FI+ MP+ PDA+IWG+LL  CR+H  V L +  +EH+FE+
Sbjct: 591 HYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 650

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           EP++ GY+VLL+N+YA A KWE V ++R   S +GL+K PG S +E+  KV +F  G  +
Sbjct: 651 EPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQT 710

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP  +++   L  L  ++K  GY P  R+ L + ++ EKE  L  HSE+LAMAF ++  P
Sbjct: 711 HPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTP 770

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           A  TIR+ KNLRVCGDCH + KF+SK   REI++RDSNRFHHFK+G CSC  +W
Sbjct: 771 AKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 199/416 (47%), Gaps = 40/416 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           ++NA I  +C+ GN ++A+ +  S     +D+ T  S+L  C +      G  +HS   +
Sbjct: 218 SWNAMISGYCQSGNAKEALTL--SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
            G+   +  + +KL+ ++   G LK+ ++VF+++    +  WN ++  Y        ++ 
Sbjct: 276 HGLE-SELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIL 334

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR---------------------------- 216
           LF++M+   I  D  T   +   L+ +G  R                             
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394

Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG--FNVDLAT 269
                V  A  +F+ L ++DV+SWN +ISGY  NG A + +E++  M   G   + +  T
Sbjct: 395 AKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGT 454

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V+VL  C+  GAL  G  +H   LK     ++    +L DMY KCG LD A+ +F ++ 
Sbjct: 455 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP 514

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
             + V W ++IA +   G  + A+ LF+ M+ EG++PD     ++L AC+  GL++ G+ 
Sbjct: 515 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEW 574

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
             + ++ +  +  SL     ++D+Y + G +  A +    MP++ D   W  ++ A
Sbjct: 575 CFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSA 630



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 157/383 (40%), Gaps = 71/383 (18%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T  S+  + + L  +   + V       G  ++D  +G+ +V M+   G +   R V
Sbjct: 347 DCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG--IAADSYTFSCVLKCLAVVG 212
           FN + N  V  WN ++  Y++ G   E++ ++  M+  G  I+A+  T+  VL   +  G
Sbjct: 407 FNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAG 466

Query: 213 NSR--------------------------------RVKDAHKLFDELSDRDVVSWNCMIS 240
             R                                R+ DA  LF ++   + V WN +I+
Sbjct: 467 ALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIA 526

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
            +  +G  EK + +FKEML+ G   D  T VT+LS C++ G +  G        + CF  
Sbjct: 527 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEG--------EWCFEM 578

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                     M +  G               S+  +  M+  Y R G  + A+   + M 
Sbjct: 579 ----------MQTDYGITP------------SLKHYGCMVDLYGRAGQLEIALNFIKSM- 615

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG--- 417
              ++PD     ++L AC   G +++GK   +++ E + +   Y    L +MYA  G   
Sbjct: 616 --PLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY-HVLLSNMYASAGKWE 672

Query: 418 SMADAESVFNQMPVKDIVSWNTM 440
            + +  S+ +   ++    W++M
Sbjct: 673 GVDEIRSITSGKGLRKTPGWSSM 695


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 284/757 (37%), Positives = 428/757 (56%), Gaps = 47/757 (6%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           KK+H+++   G    + VL +KL+ ++VT GD+   R  F+ I    +F WN ++  Y +
Sbjct: 39  KKLHALLLVFGKS-QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVR 97

Query: 176 TGNFKESLYLFKKMQSL----GIAADSYTFSCVLK-CLAVVGNSRR-------------- 216
            G + E++    ++ S+     +  D YTF  +LK C+++V   +               
Sbjct: 98  FGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVF 157

Query: 217 --------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                         +  AHK+F ++  +DV SWN MISG+  NG A   L V   M   G
Sbjct: 158 VAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEG 217

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
             +D  T+ ++L  CA    ++ G  +H   LK     ++  +N L++MYSK G L  A 
Sbjct: 218 VKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQ 277

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
            VF++M  R +VSW S+IA Y +      A+R F+GM   GI PD+  + S+    +   
Sbjct: 278 MVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLS 337

Query: 383 LLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
              I + +  + I+   +   + + NAL++MYAK G M  A +VF+Q+P KD +SWNT++
Sbjct: 338 DQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLV 397

Query: 442 G----------ALDLFVAM--LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
                      A+D +  M   ++  P+  T   I+PA + + AL++G +IH  ++++ +
Sbjct: 398 TGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSL 457

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             D  VA  ++D+Y KCG L  A SLF  IP    + W  +IA  G+HG G +A+  F D
Sbjct: 458 YLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKD 517

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M    ++ D ++F+S+L ACSHSGLVDEG + F++M+ E  I+P L+HY CMVDLL R G
Sbjct: 518 MLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAG 577

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
            L +AY  +  MP+ PDA+IWG+LL  C+I+   +L    ++ + E++ +N GYYVLL+N
Sbjct: 578 YLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSN 637

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           +YA  EKWE V K+R     RGL+K PG S + +  K  +F  G  +HP   +I   LK 
Sbjct: 638 IYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKV 697

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
           L  +MK  GY P   +   + +E EKE  L  HSE+LA+AFGI++ P    IR+ KNLRV
Sbjct: 698 LSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRV 757

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           CGDCH   K++S+ + REIV+RDSNRFHHFKDG CSC
Sbjct: 758 CGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSC 794



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 201/421 (47%), Gaps = 39/421 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  FC+ GN   A+ VL     E  K+DT T  SIL +CA    + +G  +H  +
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV 248

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+   D  + + L+ M+   G L++ + VF++++   +  WN ++  Y +  +   +
Sbjct: 249 LKHGL-DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTA 307

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD----------------------- 219
           L  FK MQ  GI  D  T   +    + + + R  +                        
Sbjct: 308 LRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVN 367

Query: 220 ----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLA 268
                     AH +FD+L  +D +SWN +++GY  NG+A + ++ +  M      + +  
Sbjct: 368 MYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQG 427

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V+++   ++ GAL  G  +HA  +K     ++     L+D+Y KCG L+ A+ +F ++
Sbjct: 428 TWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEI 487

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
              + V W ++IA     G  + A++LF+ M+ E ++ D     S+L AC+  GL++ G+
Sbjct: 488 PRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQ 547

Query: 389 DVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
              D + KE  ++ SL     ++D+  + G +  A  +   MP++ D   W  ++ A  +
Sbjct: 548 KCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKI 607

Query: 447 F 447
           +
Sbjct: 608 Y 608


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/655 (39%), Positives = 396/655 (60%), Gaps = 11/655 (1%)

Query: 187 KKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
           K++ +  I   S + +     +++  N + + +A  +F  L    V++W  +I  +    
Sbjct: 25  KQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQS 84

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           +  + L  F EM   G   D     +VL  C     L FG +VH F ++     ++   N
Sbjct: 85  LFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L++MYSK   +D   +VFE M  + VVS+ ++IAGYA+ G+++ A+R+ R M    ++P
Sbjct: 145 ALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKP 204

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D + ++S+L   +    +  GK++H Y+    + S +Y+ ++L+DMYAK   + D+E VF
Sbjct: 205 DAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 264

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALE 475
           + +  +D +SWN+++           AL LF  M+     P  V  + ++PACA LA L 
Sbjct: 265 SHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLH 324

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
            G+++HGY+LR G   +  +A+A+VDMY KCG +  AR +FD +   D +SWT +I G+ 
Sbjct: 325 LGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHA 384

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
           +HG G +A++ F +M++ G++P++V+F++VL ACSH GLVDE W +FN M     +  +L
Sbjct: 385 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 444

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           EHYA + DLL R G L EAY FI  M V P  ++W +LL  C +H  ++LAEKVAE +F 
Sbjct: 445 EHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 504

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           ++ +N G YVL+ N+YA   +W+E+ KLR ++ ++GL+K P CSWIE+K K + FV+G  
Sbjct: 505 IDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDR 564

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
           SHP   +I   LK +  +M++EGY   T   L + DE  K   L GHSE+LA+AFGI+N 
Sbjct: 565 SHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINT 624

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             G TIRVTKN+R+C DCH   KF+SK   REI++RD++RFHHF  G CSC  +W
Sbjct: 625 EPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 205/433 (47%), Gaps = 42/433 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D   + S+L+ C  +  L  G+ VH  I   G+   D   G+ L+ M+     +   R+V
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC-DLYTGNALMNMYSKLLGIDSVRKV 162

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----- 209
           F  +    V  +N ++  Y+++G ++++L + ++M +  +  D++T S VL   +     
Sbjct: 163 FELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDV 222

Query: 210 ---------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                      +   S R++D+ ++F  L  RD +SWN +++GY
Sbjct: 223 LKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGY 282

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           + NG   + L +F++M++           +V+  CA+   L  G+ +H + L+  F + I
Sbjct: 283 VQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNI 342

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              + L+DMYSKCG++  A ++F++M     VSWT++I G+A  G    A+ LF  M R+
Sbjct: 343 FIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 402

Query: 363 GIEPDVYAITSILHACACDGLL-EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           G++P+  A  ++L AC+  GL+ E     +   K   +   L    A+ D+  + G + +
Sbjct: 403 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 462

Query: 422 AESVFNQMPVKDIVS-WNTMIGA------LDLFVAMLQN-FEPDGVTMACILPACASLAA 473
           A    ++M V+   S W+T++ +      L+L   + +  F  D   M   +  C   A+
Sbjct: 463 AYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYAS 522

Query: 474 LERGREIHGYILR 486
             R +E+    LR
Sbjct: 523 NGRWKEMAKLRLR 535



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 45/317 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +YN  I  + + G  E A+ ++     S  K D  T  S+L + ++   +  GK++H  +
Sbjct: 173 SYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYV 232

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              GI   D  +GS LV M+     +++  RVF+ +       WN L+  Y + G + E+
Sbjct: 233 IRKGI-DSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEA 291

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR--------------------------- 215
           L LF++M S  +   +  FS V+   A +                               
Sbjct: 292 LRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDM 351

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 ++ A K+FD ++  D VSW  +I G+  +G   + + +F+EM   G   +    
Sbjct: 352 YSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAF 411

Query: 271 VTVLSGCANCGAL-----MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           V VL+ C++ G +      F      + L    ++E+     + D+  + G L+ A    
Sbjct: 412 VAVLTACSHVGLVDEAWGYFNSMTKVYGL----NQELEHYAAVADLLGRAGKLEEAYDFI 467

Query: 326 EKMG-ERSVVSWTSMIA 341
            KM  E +   W+++++
Sbjct: 468 SKMRVEPTGSVWSTLLS 484


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 287/750 (38%), Positives = 437/750 (58%), Gaps = 66/750 (8%)

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK--ESLYLFKKMQSLGIAADSYT 200
           +  G L     +F++I +  V  +N L+  YS +      + L+L+++M    +A ++YT
Sbjct: 68  IASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYT 127

Query: 201 FSCVLKCLAVVGNSRR--------------------------------VKDAHKLFDELS 228
           F   LK  + + +                                   + DA  +F  + 
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 187

Query: 229 DRDVVSWNCMISGYIANGVAEKG----LEVFKEMLNLGFNVDLATMVTVLSGCANCGALM 284
            RD+V+WN M++GY  +G+        L +  +M  L  N   +T+V +L   A  GAL 
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNA--STLVALLPLLAQQGALA 245

Query: 285 FGRAVHAFALKACFSKE----------ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            G +VHA+ ++AC              +     LLDMY+KCG L  A RVF+ M  R+ V
Sbjct: 246 QGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 305

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGI---EPDVYAITSILHACACDGLLEIGKDVH 391
           +W+++I G+        A  LF+ M+ +G+    P   +I S L ACA    L +G+ +H
Sbjct: 306 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLH 363

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
             + ++ + + L   N+L+ MYAK G +  A ++F++M VKD VS++ ++          
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423

Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            A  +F  M   N EPD  TM  ++PAC+ LAAL+ GR  HG ++  G++++ ++ NA++
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY KCG + L+R +F+M+P++D++SW  MIAGYG+HG G +A A F +M   G  PD V
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +FI +L ACSHSGLV EG  +F++MR+   + P++EHY CMVDLLSR G L EAY FI+ 
Sbjct: 544 TFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 603

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+  D  +W +LL  CR++  + L +KV+  + EL P+ TG +VLL+N+Y+ A +++E 
Sbjct: 604 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 663

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            ++R     +G KK+PGCSWIEI G ++ FV G  SHP + +I   L  + + +K+ GY 
Sbjct: 664 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQ 723

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T + L + +E EKE AL  HSEKLA+A+GIL+L   +TI VTKNLRVCGDCH + K +
Sbjct: 724 PDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHI 783

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           S   RR I++RD+NRFHHFK+G+CSC  FW
Sbjct: 784 SLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 210/476 (44%), Gaps = 66/476 (13%)

Query: 46  CTINPISASISKTLVCKT-KNYNAEIGRFCEVGNLEKAMEVLYSSE----KSKIDTKTYC 100
           C   P +A I  T+  +    +NA +  +   G    A+  L S +    + + +  T  
Sbjct: 173 CACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLV 232

Query: 101 SILQLCADLKSLEDGKKVHSI---IC-----ESGIVIDDGVL-GSKLVFMFVTCGDLKEG 151
           ++L L A   +L  G  VH+     C      S   + DGVL G+ L+ M+  CG L   
Sbjct: 233 ALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 292

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT-FSCVLKCLAV 210
           RRVF+ +       W+ L+  +       ++  LFK M + G+   S T  +  L+  A 
Sbjct: 293 RRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACAS 352

Query: 211 VGNSRRVKDAH--------------------------------KLFDELSDRDVVSWNCM 238
           + + R  +  H                                 LFDE++ +D VS++ +
Sbjct: 353 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 412

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           +SGY+ NG AE+   VFK+M       D ATMV+++  C++  AL  GR  H   +    
Sbjct: 413 VSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL 472

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
           + E S  N L+DMY+KCG +D + +VF  M  R +VSW +MIAGY   G+   A  LF  
Sbjct: 473 ASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLE 532

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKD-----VHDYIKENDMQSSLYVSNALMDMY 413
           M   G  PD      +L AC+  GL+  GK       H Y     M+  +     ++D+ 
Sbjct: 533 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYI----CMVDLL 588

Query: 414 AKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLF---------VAMLQNFEPDGV 459
           ++ G + +A      MP++ D+  W  ++GA  ++           M+Q   P+G 
Sbjct: 589 SRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGT 644



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 120/277 (43%), Gaps = 15/277 (5%)

Query: 60  VCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKK 117
           V  T +Y+A +  + + G  E+A  V    +   +  D  T  S++  C+ L +L+ G+ 
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 462

Query: 118 VHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
            H  +   G+  +  +  + L+ M+  CG +   R+VFN + +  +  WN ++  Y   G
Sbjct: 463 SHGSVIIRGLASETSICNA-LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG 521

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE---LSDRDVVS 234
             KE+  LF +M +LG   D  TF C+L   +  G     K    +      L+ R +  
Sbjct: 522 LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPR-MEH 580

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           + CM+      G  ++  E  + M       D+   V +L  C     +  G+ V     
Sbjct: 581 YICMVDLLSRGGFLDEAYEFIQSM---PLRADVRVWVALLGACRVYKNIDLGKKVSRMIQ 637

Query: 295 KACFSKEISFNNTLL-DMYSKCGDLDGA--IRVFEKM 328
           +     E + N  LL ++YS  G  D A  +R+ +K+
Sbjct: 638 E--LGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKV 672



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 10/172 (5%)

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG--FGCDAIATFNDMRQAGIEPDEV 560
           ++  G L  A  LFD IP+ D+ ++  +I  Y         D +  +  M +  + P+  
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 561 SFISVLYACSHSGLVDEG-WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           +F   L AC  S L D    R  +       ++  L     ++D+  +   L +A     
Sbjct: 127 TFPFALKAC--SALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFA 184

Query: 620 MMPVAPDATIWGSLLCGCR----IHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            MP A D   W ++L G       HH V     +   +  L P+ +    LL
Sbjct: 185 TMP-ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 235


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 280/736 (38%), Positives = 432/736 (58%), Gaps = 48/736 (6%)

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
           ++ G L   R+VF++I       +N L+  YS  G F  ++ L++ M    +A + YTF 
Sbjct: 45  ISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFP 104

Query: 203 CVLKCLAVVGNSR--------------------------------RVKDAHKLFDELSDR 230
            VLK  + + + R                                R   A  +F ++  R
Sbjct: 105 FVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR 164

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAV 289
           DVV+WN M++GY  +G+    +    +M + G    + +T+V++L   A  GAL  G ++
Sbjct: 165 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI 224

Query: 290 HAFALKACFSK---EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           HA+ L+AC  +   ++     LLDMY+KC  L  A RVF  M  R+ V+W+++I G+   
Sbjct: 225 HAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLC 284

Query: 347 GVFDGAIRLFRGMVREGI-EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
                A  LF+ M+ EG+      ++ S L  CA    L +G  +H  I ++ + + L  
Sbjct: 285 DRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTA 344

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NF 454
           SN+L+ MYAK G + +A   F+++ VKD +S+  ++           A  +F  M   N 
Sbjct: 345 SNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNM 404

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
           EPD  TM  ++PAC+ LAAL+ G+  HG ++  G++ + ++ N+++DMY KCG + L+R 
Sbjct: 405 EPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQ 464

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +FD +PA+D++SW  MIAGYG+HG G +A   F  M+  G  PD+V+FI ++ ACSHSGL
Sbjct: 465 VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           V EG  +F+ M ++  I P++EHY CMVDLL+R G L EAY+FI+ MP+  D  +WG+LL
Sbjct: 525 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             CRIH  + L ++V+  + +L P+ TG +VLL+N+++ A +++E  ++R     +G KK
Sbjct: 585 GACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKK 644

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
           +PG SWIEI G ++ FV G  SHP ++ I   L  + +++K+ GY   T + L + +E E
Sbjct: 645 SPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEE 704

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
           KE AL  HSEKLA+AFG+L+L   +TI VTKNLRVCGDCH   K+M+    R I++RD+N
Sbjct: 705 KEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTN 764

Query: 815 RFHHFKDGRCSCRGFW 830
           RFHHFK+G+CSC  FW
Sbjct: 765 RFHHFKNGQCSCGNFW 780



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 246/527 (46%), Gaps = 53/527 (10%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
            + YNA I  +  +G    A+++  S  + ++  +  T+  +L+ C+ L  L  G+ +H+
Sbjct: 65  ARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHA 124

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
               +G+  D  V  + L+ +++ C      R VF K+    V  WN ++  Y+  G + 
Sbjct: 125 HAAAAGLHTDLFV-STALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYH 183

Query: 181 ESLYLFKKMQSL-GIAADSYTFSCVLKCLA---------------------------VVG 212
            ++     MQ   G+  ++ T   +L  LA                           ++G
Sbjct: 184 HAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIG 243

Query: 213 NS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
            +        +++  A ++F  +  R+ V+W+ +I G++      +   +FK+ML  G  
Sbjct: 244 TALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLC 303

Query: 265 VDLATMV-TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
              AT V + L  CA+   L  G  +HA   K+    +++ +N+LL MY+K G ++ A  
Sbjct: 304 FLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATM 363

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
            F+++  +  +S+ ++++G  + G  + A  +F+ M    +EPD+  + S++ AC+    
Sbjct: 364 FFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAA 423

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           L+ GK  H  +    +     + N+L+DMYAKCG +  +  VF++MP +D+VSWNTMI  
Sbjct: 424 LQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAG 483

Query: 443 ---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISA 491
                    A  LF+ M  Q F PD VT  C++ AC+    +  G+     +  ++GI  
Sbjct: 484 YGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILP 543

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
                  +VD+  + G+L  A      +P K D+  W  ++    +H
Sbjct: 544 RMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIH 590



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 191/420 (45%), Gaps = 60/420 (14%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG--VLGSKLVFMFVTCGDLKE 150
           + +  T  S+L L A   +L  G  +H+    + +  ++   ++G+ L+ M+  C  L  
Sbjct: 199 RPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVY 258

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--------------------Q 190
             RVF+ +       W+ L+  +       E+  LFK M                     
Sbjct: 259 ACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCA 318

Query: 191 SL----------------GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS 234
           SL                GI AD    + +L   A  G    + +A   FDE++ +D +S
Sbjct: 319 SLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAG---LINEATMFFDEIAVKDTIS 375

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           +  ++SG + NG AE+   VFK+M       D+ATMV+++  C++  AL  G+  H   +
Sbjct: 376 YGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVI 435

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
               + E S  N+L+DMY+KCG +D + +VF+KM  R VVSW +MIAGY   G+   A  
Sbjct: 436 IRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATT 495

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKD-----VHDYIKENDMQSSLYVSNAL 409
           LF GM  +G  PD      ++ AC+  GL+  GK       H Y     M+  +     +
Sbjct: 496 LFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CM 551

Query: 410 MDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA------LDL---FVAMLQNFEPDGV 459
           +D+ A+ G + +A      MP+K D+  W  ++GA      +DL      ++Q   P+G 
Sbjct: 552 VDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGT 611



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 169/345 (48%), Gaps = 18/345 (5%)

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           L+ +   G L  A +VF+++      ++ ++I  Y+  G F  AI L+R M+R  + P+ 
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           Y    +L AC+    L  G+ +H +     + + L+VS AL+D+Y +C     A +VF +
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 429 MPVKDIVSWNTMI------GALDLFVAMLQNFE------PDGVTMACILPACASLAALER 476
           MP++D+V+WN M+      G     +A L + +      P+  T+  +LP  A   AL +
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220

Query: 477 GREIHGYILRHGISADRN---VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           G  IH Y LR  +  +     +  A++DMY KC  LV A  +F  +P ++ ++W+ +I G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280

Query: 534 YGMHGFGCDAIATFNDMRQAGI-EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           + +     +A   F DM   G+      S  S L  C+    +  G +   ++  +  I 
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALI-AKSGIH 339

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
             L     ++ + ++ G ++EA  F + + V  D   +G+LL GC
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLSGC 383


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 280/736 (38%), Positives = 432/736 (58%), Gaps = 48/736 (6%)

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
           ++ G L   R+VF++I       +N L+  YS  G F  ++ L++ M    +A + YTF 
Sbjct: 45  ISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFP 104

Query: 203 CVLKCLAVVGNSR--------------------------------RVKDAHKLFDELSDR 230
            VLK  + + + R                                R   A  +F ++  R
Sbjct: 105 FVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR 164

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAV 289
           DVV+WN M++GY  +G+    +    +M + G    + +T+V++L   A  GAL  G ++
Sbjct: 165 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI 224

Query: 290 HAFALKACFSK---EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           HA+ L+AC  +   ++     LLDMY+KC  L  A RVF  M  R+ V+W+++I G+   
Sbjct: 225 HAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLC 284

Query: 347 GVFDGAIRLFRGMVREGI-EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
                A  LF+ M+ EG+      ++ S L  CA    L +G  +H  I ++ + + L  
Sbjct: 285 DRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTA 344

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NF 454
           SN+L+ MYAK G + +A   F+++ VKD +S+  ++           A  +F  M   N 
Sbjct: 345 SNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNM 404

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
           EPD  TM  ++PAC+ LAAL+ G+  HG ++  G++ + ++ N+++DMY KCG + L+R 
Sbjct: 405 EPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQ 464

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +FD +PA+D++SW  MIAGYG+HG G +A   F  M+  G  PD+V+FI ++ ACSHSGL
Sbjct: 465 VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           V EG  +F+ M ++  I P++EHY CMVDLL+R G L EAY+FI+ MP+  D  +WG+LL
Sbjct: 525 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             CRIH  + L ++V+  + +L P+ TG +VLL+N+++ A +++E  ++R     +G KK
Sbjct: 585 GACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKK 644

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
           +PG SWIEI G ++ FV G  SHP ++ I   L  + +++K+ GY   T + L + +E E
Sbjct: 645 SPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEE 704

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
           KE AL  HSEKLA+AFG+L+L   +TI VTKNLRVCGDCH   K+M+    R I++RD+N
Sbjct: 705 KEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTN 764

Query: 815 RFHHFKDGRCSCRGFW 830
           RFHHFK+G+CSC  FW
Sbjct: 765 RFHHFKNGQCSCGNFW 780



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 246/527 (46%), Gaps = 53/527 (10%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
            + YNA I  +  +G    A+++  S  + ++  +  T+  +L+ C+ L  L  G+ +H+
Sbjct: 65  ARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHA 124

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
               +G+  D  V  + L+ +++ C      R VF K+    V  WN ++  Y+  G + 
Sbjct: 125 HAAAAGLHTDLFV-STALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYH 183

Query: 181 ESLYLFKKMQSL-GIAADSYTFSCVLKCLA---------------------------VVG 212
            ++     MQ   G+  ++ T   +L  LA                           ++G
Sbjct: 184 HAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIG 243

Query: 213 NS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
            +        +++  A ++F  +  R+ V+W+ +I G++      +   +FK+ML  G  
Sbjct: 244 TALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLC 303

Query: 265 VDLATMV-TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
              AT V + L  CA+   L  G  +HA   K+    +++ +N+LL MY+K G ++ A  
Sbjct: 304 FLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATM 363

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
            F+++  +  +S+ ++++G  + G  + A  +F+ M    +EPD+  + S++ AC+    
Sbjct: 364 FFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAA 423

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           L+ GK  H  +    +     + N+L+DMYAKCG +  +  VF++MP +D+VSWNTMI  
Sbjct: 424 LQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAG 483

Query: 443 ---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISA 491
                    A  LF+ M  Q F PD VT  C++ AC+    +  G+     +  ++GI  
Sbjct: 484 YGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILP 543

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
                  +VD+  + G+L  A      +P K D+  W  ++    +H
Sbjct: 544 RMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIH 590



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 201/450 (44%), Gaps = 63/450 (14%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +NA +  +   G    A+  L   +     + +  T  S+L L A   +L  G  +H+  
Sbjct: 169 WNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYC 228

Query: 123 CESGIVIDDG--VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
             + +  ++   ++G+ L+ M+  C  L    RVF+ +       W+ L+  +       
Sbjct: 229 LRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMT 288

Query: 181 ESLYLFKKM--------------------QSL----------------GIAADSYTFSCV 204
           E+  LFK M                     SL                GI AD    + +
Sbjct: 289 EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSL 348

Query: 205 LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
           L   A  G    + +A   FDE++ +D +S+  ++SG + NG AE+   VFK+M      
Sbjct: 349 LSMYAKAG---LINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D+ATMV+++  C++  AL  G+  H   +    + E S  N+L+DMY+KCG +D + +V
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQV 465

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F+KM  R VVSW +MIAGY   G+   A  LF GM  +G  PD      ++ AC+  GL+
Sbjct: 466 FDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLV 525

Query: 385 EIGKD-----VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWN 438
             GK       H Y     M+  +     ++D+ A+ G + +A      MP+K D+  W 
Sbjct: 526 TEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGLLDEAYQFIQSMPLKADVRVWG 581

Query: 439 TMIGA------LDL---FVAMLQNFEPDGV 459
            ++GA      +DL      ++Q   P+G 
Sbjct: 582 ALLGACRIHKNIDLGKQVSRIIQKLGPEGT 611



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 169/345 (48%), Gaps = 18/345 (5%)

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           L+ +   G L  A +VF+++      ++ ++I  Y+  G F  AI L+R M+R  + P+ 
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           Y    +L AC+    L  G+ +H +     + + L+VS AL+D+Y +C     A +VF +
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 429 MPVKDIVSWNTMI------GALDLFVAMLQNFE------PDGVTMACILPACASLAALER 476
           MP++D+V+WN M+      G     +A L + +      P+  T+  +LP  A   AL +
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220

Query: 477 GREIHGYILRHGISADRN---VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           G  IH Y LR  +  +     +  A++DMY KC  LV A  +F  +P ++ ++W+ +I G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280

Query: 534 YGMHGFGCDAIATFNDMRQAGI-EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           + +     +A   F DM   G+      S  S L  C+    +  G +   ++  +  I 
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALI-AKSGIH 339

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
             L     ++ + ++ G ++EA  F + + V  D   +G+LL GC
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLSGC 383


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 289/759 (38%), Positives = 426/759 (56%), Gaps = 44/759 (5%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
            K++H+++   G    D VL ++LV ++ T GDL      F  I    +F WN ++  Y 
Sbjct: 67  AKQLHALLLVLGKA-QDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYV 125

Query: 175 KTGNFKESLYLFKKMQSL-GIAADSYTFSCVLK-CLAVVGNSR----------------- 215
           + G +++S+    ++ SL G+  D YTF  VLK CL++    +                 
Sbjct: 126 RRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFEHDVYVA 185

Query: 216 -----------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                       V+ AHK+F ++  RDV SWN MISG+  NG   + L V   M      
Sbjct: 186 ASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVK 245

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           +D  T+ ++L  CA    ++ G  VH + +K     ++  +N L++MYSK G L  A RV
Sbjct: 246 MDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRV 305

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F+ M  R +VSW S+IA Y +      A+  F+ M+  G+ PD+  + S+          
Sbjct: 306 FDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDR 365

Query: 385 EIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
            IG+ VH ++ +   ++  + + NAL++MYAK GS+  A +VF Q+P +D++SWNT+I  
Sbjct: 366 RIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITG 425

Query: 443 ---------ALDLFVAMLQ--NFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                    A+D +  M +     P+  T   ILPA + + AL++G +IHG ++++ +  
Sbjct: 426 YAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFL 485

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D  VA  ++DMY KCG L  A SLF  IP +  + W  +I+  G+HG G  A+  F DMR
Sbjct: 486 DVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMR 545

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
             G++ D ++F+S+L ACSHSGLVDE    F+ M+ E  I+P L+HY CMVDL  R G L
Sbjct: 546 ADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYL 605

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
            +AY  +  MP+  DA+IWG+LL  CRIH   +L    ++ + E++ +N GYYVLL+N+Y
Sbjct: 606 EKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIY 665

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           A   KWE   K+R     RGL+K PG S + +   V +F AG  SHP   +I   L+ L 
Sbjct: 666 ANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLN 725

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
            +MK  GY P   + L + +E EKE  L  HSE+LA+ FGI++ P    IR+ KNLRVCG
Sbjct: 726 AKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCG 785

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   K++SK   REI++RDSNRFHHFKDG CSC  +W
Sbjct: 786 DCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 213/418 (50%), Gaps = 41/418 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  FC+ GN+ +A+ VL    +E+ K+DT T  S+L +CA    +  G  VH  +
Sbjct: 215 SWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYV 274

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+   D  + + L+ M+   G L++ +RVF+ ++   +  WN ++  Y +  +   +
Sbjct: 275 IKHGLE-SDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTA 333

Query: 183 LYLFKKMQSLGIAADSYTFSC--------------------VLKCL-----AVVGNSR-- 215
           L  FK+M  +G+  D  T                       V++C       V+GN+   
Sbjct: 334 LGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVN 393

Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV--DL 267
                  +  A  +F++L  RDV+SWN +I+GY  NG+A + ++ +  M+  G  +  + 
Sbjct: 394 MYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYN-MMEEGRTIVPNQ 452

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T V++L   ++ GAL  G  +H   +K C   ++     L+DMY KCG L+ A+ +F +
Sbjct: 453 GTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYE 512

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           + + + V W ++I+     G  + A++LF+ M  +G++ D     S+L AC+  GL++  
Sbjct: 513 IPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEA 572

Query: 388 KDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           +   D + KE  ++ +L     ++D++ + G +  A ++ + MP++ D   W T++ A
Sbjct: 573 QWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAA 630



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 141/367 (38%), Gaps = 69/367 (18%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T  S+  +   L     G+ VH  +     +  D V+G+ LV M+   G +   R
Sbjct: 346 RPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCAR 405

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS-LGIAADSYTFSCVLKCLAVV 211
            VF ++ +  V  WN L+  Y++ G   E++  +  M+    I  +  T+  +L   + V
Sbjct: 406 AVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHV 465

Query: 212 GNSR--------------------------------RVKDAHKLFDELSDRDVVSWNCMI 239
           G  +                                R++DA  LF E+     V WN +I
Sbjct: 466 GALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAII 525

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           S    +G  EK L++FK+M   G   D  T V++LS C++ G                  
Sbjct: 526 SSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSG------------------ 567

Query: 300 KEISFNNTLLDMYSKCGD-LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
                   L+D    C D +    R+     + ++  +  M+  + R G  + A  L   
Sbjct: 568 --------LVDEAQWCFDTMQKEYRI-----KPNLKHYGCMVDLFGRAGYLEKAYNLVSN 614

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M    I+ D     ++L AC   G  E+G    D + E D ++  Y    L ++YA  G 
Sbjct: 615 M---PIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYV-LLSNIYANVGK 670

Query: 419 MADAESV 425
              A  V
Sbjct: 671 WEGAVKV 677


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 282/759 (37%), Positives = 425/759 (55%), Gaps = 46/759 (6%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           K  H+ I  + +  D  V  +KLV  +     L+  R VF++    K  + N ++  Y +
Sbjct: 49  KSTHAQIITNSLSTDQFV-ATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQ 107

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VV 211
           +G ++E+L LF  M+S  +  DS + +  LK  A                         V
Sbjct: 108 SGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFV 167

Query: 212 GNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
           G+S         ++ +A ++FD + ++DVV WN +I GY+  G  +   ++F EM   G 
Sbjct: 168 GSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGI 227

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
                TM +++  C   G L  G+ +H + L      +I    + +DMYSK GD++ A  
Sbjct: 228 KPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARW 287

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF KM  R++VSW +MI+G  R G+   +  LF  +VR     D+  I S+L  C+    
Sbjct: 288 VFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTAS 347

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-- 441
           L  GK +H        +S+L +S A++D+Y+KCGS+  A  VFN+M  +++++W  M+  
Sbjct: 348 LATGKILHG-CAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVG 406

Query: 442 --------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    AL LF  M +     + VT   ++ +CA L +L+RGR IHG++ R G + D
Sbjct: 407 LAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFD 466

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
                A+VDMY KCG + LA  +F     +KD++ W  MI GYGMHG G  A+  ++ M 
Sbjct: 467 IVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMI 526

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
           + G++P++ +F+S+L ACSHS LV++G   FN M  + NI P  +HYAC+VDLLSR G  
Sbjct: 527 EEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRF 586

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
            EA   IE MP  P   +  +LL GCR H  + L  + ++ +  L+  N G Y++L+N+Y
Sbjct: 587 EEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIY 646

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           AEA +W++V  +R  +  RGLKK PG S +E    V+ F AG +SHP+ ++I   L+ LR
Sbjct: 647 AEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLR 706

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
             ++  GY P T   L + DE  K   L GHSE+LA+AFG+L  PAG  IR+TKNLRVCG
Sbjct: 707 SAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCG 766

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH + K++SK  +REI++RD+NRFHHF +G CSC  +W
Sbjct: 767 DCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 275/542 (50%), Gaps = 27/542 (4%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLL--MHEYSKTGNFKESLYLFKKMQSLGIAADSY 199
           F TC  LK+G+  FN++      I N L  + E SK   + +S +   ++ +  ++ D +
Sbjct: 13  FSTCNPLKDGQ--FNQL---PTIIHNFLSLLRESSKNLIWVKSTH--AQIITNSLSTDQF 65

Query: 200 TFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
             + ++K  +   + R ++ A  +FD+      +  N M+ GY+ +G   + LE+F  M 
Sbjct: 66  VATKLVKAYS---DLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMR 122

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
           +    VD  +    L  CA+      G  + + A++    K     ++++    K G + 
Sbjct: 123 SRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIG 182

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A RVF+ M  + VV W S+I GY + G FD A +LF  M   GI+P    +TS++ AC 
Sbjct: 183 EAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACG 242

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
             G L++GK +H Y+    + + + V  + +DMY+K G +  A  VF +MP +++VSWN 
Sbjct: 243 GIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNA 302

Query: 440 MIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHG 488
           MI           + DLF  ++++    D  T+  +L  C+  A+L  G+ +HG  +R  
Sbjct: 303 MISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-S 361

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
             ++  ++ AIVD+Y KCG L  A  +F+ +  +++I+WT M+ G   +G   DA+  F 
Sbjct: 362 FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFA 421

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            M++ GI  + V+F+S++++C+H G +  G R  +   +       + +   +VD+ ++ 
Sbjct: 422 QMQEEGIAANSVTFVSLVHSCAHLGSLKRG-RSIHGHLFRLGFAFDIVNMTALVDMYAKC 480

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVL 666
           G ++ A R      ++ D  +W S++ G  +H     A  +   + E  L+P+ T +  L
Sbjct: 481 GKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSL 540

Query: 667 LA 668
           L+
Sbjct: 541 LS 542



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 249/511 (48%), Gaps = 54/511 (10%)

Query: 57  KTLVCKTKNYNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLED 114
           K L+C     NA +  + + G   + +E+  L  S   ++D+ +    L+ CA     E 
Sbjct: 94  KGLLC-----NAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEM 148

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           G ++ S   E G+   +  +GS ++   V  G + E +RVF+ + N  V  WN ++  Y 
Sbjct: 149 GMEIISSAVEKGME-KNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYV 207

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------------------- 215
           + G F  +  LF +M   GI     T + +++    +GN +                   
Sbjct: 208 QAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDIL 267

Query: 216 -------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                         ++ A  +F ++  R++VSWN MISG + NG+  +  ++F  ++   
Sbjct: 268 VLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSS 327

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
              DL T+V++L GC+   +L  G+ +H  A+++ F   +  +  ++D+YSKCG L  A 
Sbjct: 328 GGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQAT 386

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
            VF +M +R+V++WT+M+ G A+ G  + A+RLF  M  EGI  +     S++H+CA  G
Sbjct: 387 FVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLG 446

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMI 441
            L+ G+ +H ++        +    AL+DMYAKCG +  AE +F+   + KD+V WN+MI
Sbjct: 447 SLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMI 506

Query: 442 G----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-HGI 489
                      A+ ++  M+ +  +P+  T   +L AC+    +E+G  +   + R H I
Sbjct: 507 TGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNI 566

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
                    +VD+  + G    A++L + +P
Sbjct: 567 RPIEKHYACLVDLLSRAGRFEEAQALIEKMP 597



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            + A +    + G+ E A+ +    ++  I  ++ T+ S++  CA L SL+ G+ +H  +
Sbjct: 399 TWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHL 458

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK-VFIWNLLMHEYSKTGNFKE 181
              G   D  V  + LV M+  CG +    R+F+     K V +WN ++  Y   G+  +
Sbjct: 459 FRLGFAFDI-VNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQ 517

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVS----WN 236
           ++ ++ KM   G+  +  TF   L  L+   +SR V+    LF+ +  D ++      + 
Sbjct: 518 AVGIYHKMIEEGLKPNQTTF---LSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYA 574

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           C++      G  E+   + ++M    F    A +  +LSGC
Sbjct: 575 CLVDLLSRAGRFEEAQALIEKM---PFQPGTAVLEALLSGC 612


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 287/773 (37%), Positives = 439/773 (56%), Gaps = 51/773 (6%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           ++ + C +L+S    K +H+ +  S   I +  + +KLV ++   G++   R  F+ I N
Sbjct: 59  TLFRYCTNLQS---AKCLHARLVVSK-QIQNVCISAKLVNLYCYLGNVALARHTFDHIQN 114

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKK-MQSLGIAADSYTFSCVLK------------C 207
             V+ WNL++  Y + GN  E +  F   M S G+  D  TF  VLK            C
Sbjct: 115 RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHC 174

Query: 208 LAV-----------------VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
           LA+                     + V +A  LFDE+  RD+ SWN MISGY  +G A++
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            L +   +  +    D  T+V++LS C   G    G  +H++++K     E+  +N L+D
Sbjct: 235 ALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           +Y++ G L    +VF++M  R ++SW S+I  Y        AI LF+ M    I+PD   
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 350

Query: 371 ITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           + S+    +  G +   + V  + +++      + + NA++ MYAK G +  A +VFN +
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQNFE--PDGVTMACILPACASLAALERG 477
           P  D++SWNT+I           A++++  M +  E   +  T   +LPAC+   AL +G
Sbjct: 411 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
            ++HG +L++G+  D  V  ++ DMY KCG L  A SLF  IP  + + W  +IA +G H
Sbjct: 471 MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFH 530

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G G  A+  F +M   G++PD ++F+++L ACSHSGLVDEG   F MM+ +  I P L+H
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           Y CMVD+  R G L  A +FI+ M + PDA+IWG+LL  CR+H  V L +  +EH+FE+E
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           P++ GY+VLL+N+YA A KWE V ++R     +GL+K PG S +E+  KV +F  G  +H
Sbjct: 651 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 710

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
           P  +++   L  L+ ++K  GY P  R+ L + ++ EKE  L  HSE+LA+AF ++  PA
Sbjct: 711 PMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPA 770

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             TIR+ KNLRVCGDCH + KF+SK   REI++RDSNRFHHFK+G CSC  +W
Sbjct: 771 KTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 235/487 (48%), Gaps = 47/487 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D +T+ S+L+ C   +++ DG K+H +  + G + D  V  S L+ ++     +   R +
Sbjct: 152 DYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAAS-LIHLYSRYKAVGNARIL 207

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL--------------------GI 194
           F+++    +  WN ++  Y ++GN KE+L L   ++++                    G+
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGV 267

Query: 195 AADSYTFSCVLKCLAVVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
              SY+    L+    V N          R++D  K+FD +  RD++SWN +I  Y  N 
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNE 327

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL-KACFSKEISFN 305
              + + +F+EM       D  T++++ S  +  G +   R+V  F L K  F ++I+  
Sbjct: 328 QPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG 387

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-I 364
           N ++ MY+K G +D A  VF  +    V+SW ++I+GYA+ G    AI ++  M  EG I
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
             +     S+L AC+  G L  G  +H  + +N +   ++V  +L DMY KCG + DA S
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAA 473
           +F Q+P  + V WNT+I           A+ LF  ML +  +PD +T   +L AC+    
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL 567

Query: 474 LERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWTIMI 531
           ++ G+     +   +GI+        +VDMY + G L  A + +  M    D   W  ++
Sbjct: 568 VDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALL 627

Query: 532 AGYGMHG 538
           +   +HG
Sbjct: 628 SACRVHG 634



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 197/415 (47%), Gaps = 39/415 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           ++NA I  +C+ GN ++A+ +  S+    +D+ T  S+L  C +      G  +HS   +
Sbjct: 218 SWNAMISGYCQSGNAKEALTL--SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
            G+   +  + +KL+ ++   G L++ ++VF+++    +  WN ++  Y        ++ 
Sbjct: 276 HGLE-SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR---------------------------- 216
           LF++M+   I  D  T   +   L+ +G+ R                             
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394

Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATM 270
                V  A  +F+ L + DV+SWN +ISGY  NG A + +E++  M   G    +  T 
Sbjct: 395 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           V+VL  C+  GAL  G  +H   LK     ++    +L DMY KCG L+ A+ +F ++  
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
            + V W ++IA +   G  + A+ LF+ M+ EG++PD     ++L AC+  GL++ G+  
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574

Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            + ++ +  +  SL     ++DMY + G +  A      M ++ D   W  ++ A
Sbjct: 575 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/399 (21%), Positives = 163/399 (40%), Gaps = 74/399 (18%)

Query: 81  KAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           +A+ +      S+I  D  T  S+  + + L  +   + V       G  ++D  +G+ +
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAAD 197
           V M+   G +   R VFN + N  V  WN ++  Y++ G   E++ ++  M+  G IAA+
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450

Query: 198 SYTFSCVLKCLAVVGNSR--------------------------------RVKDAHKLFD 225
             T+  VL   +  G  R                                R++DA  LF 
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
           ++   + V WN +I+ +  +G  EK + +FKEML+ G   D  T VT+LS C++ G +  
Sbjct: 511 QIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 570

Query: 286 GR-AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           G+            +  +     ++DMY + G L+ A++  + M                
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM---------------- 614

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
                              ++PD     ++L AC   G +++GK   +++ E + +   Y
Sbjct: 615 ------------------SLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 656

Query: 405 VSNALMDMYAKCG---SMADAESVFNQMPVKDIVSWNTM 440
               L +MYA  G    + +  S+ +   ++    W++M
Sbjct: 657 -HVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 284/790 (35%), Positives = 445/790 (56%), Gaps = 56/790 (7%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
            +++ K Y S L  C +L  +   ++VH+     G+ +++ V+ +KL++ +     L + 
Sbjct: 77  QRLNPKFYISALVNCRNLTQV---RQVHAQASVHGM-LENIVVANKLIYFYSYYRALDDA 132

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
             +F+ +       W++++  ++K G++      F+++   G   D+YT   V++    +
Sbjct: 133 YGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDL 192

Query: 212 GN-----------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
            N            R ++DA  LFD++ +RD+V+W  MI GY   G A + L +F++M  
Sbjct: 193 KNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE 252

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
            G   D   MVTV+  CA  GA+   R +  +  +  F  ++     ++DMY+KCG ++ 
Sbjct: 253 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVES 312

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA- 379
           A  +F++M E++V+SW++MIA Y   G    A+ LFR M+  G+ PD   + S+L+AC  
Sbjct: 313 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACIN 372

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
           C  L ++ + VH     + M  +L V+N L+  Y+   ++ DA  +F+ M V+D VSW+ 
Sbjct: 373 CRNLTQV-RQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSV 431

Query: 440 MIG--------------------------------------ALDLFVAMLQN-FEPDGVT 460
           M+G                                      +L LF  M +    PD V 
Sbjct: 432 MVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVA 491

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           M  ++ ACA L A+ + R I  YI R     D  +  A++DM+ KCG +  AR +FD + 
Sbjct: 492 MVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME 551

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
            K++ISW+ MIA YG HG G  A+  F  M ++GI P++++ +S+LYACSH+GLV+EG R
Sbjct: 552 EKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLR 611

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           FF++M  + ++   ++HY C+VDLL R G L EA + IE M V  D  +WG+ L  CR H
Sbjct: 612 FFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTH 671

Query: 641 HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSW 700
            +V LAEK A  + EL+P N G+Y+LL+N+YA A +WE+V K R+ +S+R LKK PG +W
Sbjct: 672 KDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTW 731

Query: 701 IEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALC 760
           IE+  K + F  G ++HP +K+I  +LK L  +++  GY P T + L + DE  K   L 
Sbjct: 732 IEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILY 791

Query: 761 GHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFK 820
            HSEKLA+AFG++  P    IR+ KNLRVCGDCH   K +S    R I++RD+NRFHHFK
Sbjct: 792 SHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFK 851

Query: 821 DGRCSCRGFW 830
           +G CSC  +W
Sbjct: 852 EGACSCGDYW 861


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 270/714 (37%), Positives = 422/714 (59%), Gaps = 25/714 (3%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNK--IDNGKVF--IWNLLMHEYSKTGNFKESLYLFKKMQS 191
           S+ V +    G LKE   + N   +   +V+  ++  L+ E ++  + ++   +   +  
Sbjct: 16  SRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILK 75

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
            GI  + Y  + +L   A  G+   + DA ++FD + DR++VSW  MI  ++A     K 
Sbjct: 76  SGIQPNRYLENTLLSMYAKCGS---LTDARRVFDSIRDRNIVSWTAMIEAFVA---GNKN 129

Query: 252 LEVFK--EMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           LE FK  E + L G   D  T V++L+   N   L  G+ VH   ++A    E     +L
Sbjct: 130 LEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSL 189

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           + MY+KCGD+  A  +F+++ E++VV+WT +IAGYA++G  D A+ L   M +  + P+ 
Sbjct: 190 VGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNK 249

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               SIL  C     LE GK VH YI ++     L+V N+L+ MY KCG + +A  +F+ 
Sbjct: 250 ITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSD 309

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERG 477
           +P +D+V+W  M+           A++LF  M Q   +PD +T   +L +C+S A L+ G
Sbjct: 310 LPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEG 369

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY-GM 536
           + IH  ++  G + D  + +A+V MY KCG +  A  +F+ +  +++++WT +I G    
Sbjct: 370 KRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQ 429

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG   +A+  F+ M++ GI+PD+V+F SVL AC+H GLV+EG + F  M  +  I+P +E
Sbjct: 430 HGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVE 489

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HY+C VDLL R G+L EA   I  MP  P  ++WG+LL  CR+H +V+  E+ AE+V +L
Sbjct: 490 HYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKL 549

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           +PD+ G YV L+++YA A ++E+ +K+R+ + +R + K PG SWIE+ GKV++F     S
Sbjct: 550 DPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKS 609

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP +++I   L +L  ++K  GY P TR+ L + DE +KE  L  HSE+LA+ +G++  P
Sbjct: 610 HPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTP 669

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            G  IR+ KNLRVCGDCH   KF+SK   REI+ RD+ RFHHF DG CSC  FW
Sbjct: 670 PGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 149/499 (29%), Positives = 251/499 (50%), Gaps = 48/499 (9%)

Query: 69  EIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           ++   C+ G L++A+ ++ +   + +++ +  +  +LQ CA L+SLE G++VH+ I +SG
Sbjct: 18  DVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSG 77

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
           I   +  L + L+ M+  CG L + RRVF+ I +  +  W  ++  +       E+   +
Sbjct: 78  IQ-PNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCY 136

Query: 187 KKMQSLGIAADSYTFSCVLKCL-----------------------------AVVGNSRRV 217
           + M+  G   D  TF  +L                                ++VG   + 
Sbjct: 137 ETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKC 196

Query: 218 KDAHK---LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
            D  K   +FD L +++VV+W  +I+GY   G  +  LE+ + M       +  T  ++L
Sbjct: 197 GDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASIL 256

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            GC    AL  G+ VH + +++ + +E+   N+L+ MY KCG L+ A ++F  +  R VV
Sbjct: 257 QGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVV 316

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           +WT+M+ GYA+ G  D AI LFR M ++GI+PD    TS+L +C+    L+ GK +H  +
Sbjct: 317 TWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQL 376

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-----------A 443
                   +Y+ +AL+ MYAKCGSM DA  VFNQM  +++V+W  +I            A
Sbjct: 377 VHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREA 436

Query: 444 LDLFVAM-LQNFEPDGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVD 501
           L+ F  M  Q  +PD VT   +L AC  +  +E GR+      L +GI       +  VD
Sbjct: 437 LEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVD 496

Query: 502 MYVKCGVLVLARSLFDMIP 520
           +  + G L  A ++   +P
Sbjct: 497 LLGRAGHLEEAENVILSMP 515



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 222/468 (47%), Gaps = 61/468 (13%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T+ S+L    + + L+ G+KVH  I E+G+ ++  V G+ LV M+  CGD+ + R
Sbjct: 145 KPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRV-GTSLVGMYAKCGDISKAR 203

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---CLA 209
            +F+++    V  W LL+  Y++ G    +L L + MQ   +A +  TF+ +L+     A
Sbjct: 204 VIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPA 263

Query: 210 VVGNSRRV-----------------------------KDAHKLFDELSDRDVVSWNCMIS 240
            + + ++V                             ++A KLF +L  RDVV+W  M++
Sbjct: 264 ALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVT 323

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY   G  ++ + +F+ M   G   D  T  +VL+ C++   L  G+ +H   + A ++ 
Sbjct: 324 GYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNL 383

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG-YAREGVFDGAIRLFRGM 359
           ++   + L+ MY+KCG +D A  VF +M ER+VV+WT++I G  A+ G    A+  F  M
Sbjct: 384 DVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQM 443

Query: 360 VREGIEPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
            ++GI+PD    TS+L AC   GL+E G K       +  ++  +   +  +D+  + G 
Sbjct: 444 KKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGH 503

Query: 419 MADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGR 478
           + +AE+V   MP                       F P       +L AC   + +ERG 
Sbjct: 504 LEEAENVILSMP-----------------------FIPGPSVWGALLSACRVHSDVERGE 540

Query: 479 EIHGYILRHGISADRNVAN-AIVDMYVKCGVLVLARSLFDMIPAKDLI 525
                +L+  +  D + A  A+  +Y   G    A  +  ++  +D++
Sbjct: 541 RAAENVLK--LDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVV 586



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 79/420 (18%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I  + + G ++ A+E+L + +++++  +  T+ SILQ C    +LE GKKVH  I +SG 
Sbjct: 221 IAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGY 280

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
             +  V+ S L+ M+  CG L+E R++F+ + +  V  W  ++  Y++ G   E++ LF+
Sbjct: 281 GRELWVVNS-LITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFR 339

Query: 188 KMQSLGIAADSYTFSCVL---KCLAVVGNSRRVK-------------------------- 218
           +MQ  GI  D  TF+ VL      A +   +R+                           
Sbjct: 340 RMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCG 399

Query: 219 ---DAHKLFDELSDRDVVSWNCMISGYIA-NGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
              DA  +F+++S+R+VV+W  +I+G  A +G   + LE F +M   G   D  T  +VL
Sbjct: 400 SMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVL 459

Query: 275 SGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           S C + G +  GR    +  L       +   +  +D+  + G L+ A  V   M     
Sbjct: 460 SACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSM----- 514

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KDVHD 392
                 I G                       P V+   ++L AC     +E G +   +
Sbjct: 515 ----PFIPG-----------------------PSVWG--ALLSACRVHSDVERGERAAEN 545

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV-----SWNTMIGALDLF 447
            +K +      YV  AL  +YA  G   DAE V   M  +D+V     SW  + G + +F
Sbjct: 546 VLKLDPDDDGAYV--ALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVF 603


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 281/786 (35%), Positives = 444/786 (56%), Gaps = 44/786 (5%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           S    + +T  Y S+LQ C        GK +H  I + G  +D     + L+  +V    
Sbjct: 36  SHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLD-LFANNILLNFYVKYDS 94

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           L +  ++F+++ +     +  L+  YS+   F E++ LF ++Q  G   + + FS VLK 
Sbjct: 95  LPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKL 154

Query: 208 L------------------------AVVGNSR--------RVKDAHKLFDELSDRDVVSW 235
           L                        A VG +           + A ++FD +  +D+VSW
Sbjct: 155 LVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSW 214

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
             M++ Y+ N   E+ L++F  M  +GF  +  T  +VL  C        G+AVH  A K
Sbjct: 215 TGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFK 274

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
             + +E+     L+D+Y K GD+D A++VFE+M +  V+ W+ MIA YA+    + AI +
Sbjct: 275 TSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEM 334

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           F  M R  + P+ + + S+L ACA    L++G  +H ++ +  +  +++VSNALMDMYAK
Sbjct: 335 FCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAK 394

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACI 464
           CG M ++  +F++ P    VSWNT+I           AL LF  ML+   +   VT + +
Sbjct: 395 CGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSV 454

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           L ACA +AALE G +IH   ++     +  V NA++DMY KCG +  AR +FDM+   D 
Sbjct: 455 LRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQ 514

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           +SW  MI+GY +HG   +A+ TF  M +   +PD+V+F+ +L ACS++GL+D G  +F  
Sbjct: 515 VSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKS 574

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVK 644
           M  E +IEP  EHY CMV LL R+G+L +A + +  +P  P   +W +LL  C IH++V+
Sbjct: 575 MVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVE 634

Query: 645 LAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIK 704
           L    A+ V E+EP++   +VLL+N+YA A +W  V  +R  + R+G++K PG SWIE +
Sbjct: 635 LGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQ 694

Query: 705 GKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSE 764
           G+V+ F  G +SHP  K I  +L+ L ++ + EGY P     L++ ++++KE  L  HSE
Sbjct: 695 GRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSE 754

Query: 765 KLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRC 824
           +LA+A+G++  P+   +R+ KNLR+C DCH   K +SK  +R+I++RD NRFHHF +G C
Sbjct: 755 RLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGIC 814

Query: 825 SCRGFW 830
           SC  +W
Sbjct: 815 SCGDYW 820



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 147/313 (46%), Gaps = 45/313 (14%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I R+ +    E+A+E+     +  +  +  T  S+LQ CA L  L+ G ++H  + + G+
Sbjct: 319 IARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGL 378

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
            ++  V  + L+ M+  CG ++   ++F++  N     WN ++  Y + GN +++L LFK
Sbjct: 379 DMNVFV-SNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFK 437

Query: 188 KMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR-------- 215
            M    +     T+S VL+  A                        VVGN+         
Sbjct: 438 DMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCG 497

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
            +KDA  +FD L + D VSWN MISGY  +G+  + L+ F+ ML      D  T V +LS
Sbjct: 498 NIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILS 557

Query: 276 GCANCGALMFGRA-----VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG- 329
            C+N G L  G+A     V  + ++ C          ++ +  + G LD A ++  ++  
Sbjct: 558 ACSNAGLLDRGQAYFKSMVEEYDIEPC----AEHYTCMVWLLGRSGHLDKAAKLVHEIPF 613

Query: 330 ERSVVSWTSMIAG 342
           E SV+ W ++++ 
Sbjct: 614 EPSVMVWRALLSA 626



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 8/236 (3%)

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLE 113
           S++  C   ++N  I  + + GN EKA+ +     + ++     TY S+L+ CA + +LE
Sbjct: 406 SESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALE 465

Query: 114 DGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
            G ++HS+  ++ I   + V+G+ L+ M+  CG++K+ R VF+ +       WN ++  Y
Sbjct: 466 PGSQIHSLSVKT-IYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGY 524

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVV 233
           S  G + E+L  F+ M       D  TF  +L   +  G   R +   K   E  D +  
Sbjct: 525 SVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPC 584

Query: 234 S--WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
           +  + CM+     +G  +K  ++  E   + F   +     +LS C     +  GR
Sbjct: 585 AEHYTCMVWLLGRSGHLDKAAKLVHE---IPFEPSVMVWRALLSACVIHNDVELGR 637


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 275/790 (34%), Positives = 450/790 (56%), Gaps = 55/790 (6%)

Query: 90  EKSKIDTKTYCS------ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFV 143
           + + I T+ Y        +L+ C   K L    ++   I ++G   ++ +  +K++ +F 
Sbjct: 35  QSNSIPTRVYSHRHPSVVLLENCTSKKEL---YQILPFIIKNGFY-NEHLFQTKVISLFC 90

Query: 144 TCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
             G   E  RVF  ++     ++++++  Y+K  +  ++L  F +M    +      ++C
Sbjct: 91  KFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYAC 150

Query: 204 VLK--------------------------------CLAVVGNSRRVKDAHKLFDELSDRD 231
           +L+                                 +++    R++ +A+K+F+ +  +D
Sbjct: 151 LLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKD 210

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           +VSW  +++GY  NG A++ L++  +M   G   D  T+V++L   A+  AL  GR++H 
Sbjct: 211 LVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHG 270

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
           +A ++ F   ++  N LLDMY KCG    A  VF+ M  ++VVSW +MI G A+ G  + 
Sbjct: 271 YAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEE 330

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           A   F  M+ EG  P    +  +L ACA  G LE G  VH  + +  + S++ V N+L+ 
Sbjct: 331 AFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLIS 390

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVT 460
           MY+KC  +  A S+FN +  K  V+WN MI           AL+LF  M  Q  + D  T
Sbjct: 391 MYSKCKRVDIAASIFNNLE-KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFT 449

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           +  ++ A A  +   + + IHG  +R  +  +  V+ A+VDMY KCG +  AR LFDM+ 
Sbjct: 450 LVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQ 509

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
            + +I+W  MI GYG HG G + +  FN+M++  ++P++++F+SV+ ACSHSG V+EG  
Sbjct: 510 ERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLL 569

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
            F  M+ +  +EP ++HY+ MVDLL R G L +A+ FI+ MP+ P  ++ G++L  C+IH
Sbjct: 570 LFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIH 629

Query: 641 HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSW 700
             V+L EK A+ +F+L+PD  GY+VLLAN+YA    W++V K+R  +  +GL K PGCSW
Sbjct: 630 KNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSW 689

Query: 701 IEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALC 760
           +E++ +++ F +G ++HP +KKI + L+ L  E+K  GY P    ++ + +E  K+  L 
Sbjct: 690 VELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPD-SIHDVEEDVKKQLLS 748

Query: 761 GHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFK 820
            HSE+LA+AFG+LN   G T+ + KNLRVCGDCH+  K++S    REI++RD  RFHHFK
Sbjct: 749 SHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFK 808

Query: 821 DGRCSCRGFW 830
           +G CSC  +W
Sbjct: 809 NGSCSCGDYW 818


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 288/800 (36%), Positives = 435/800 (54%), Gaps = 103/800 (12%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           LG+ +V  ++ CG       V  ++       WNLL+ E+ K G    ++ +  +M   G
Sbjct: 53  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112

Query: 194 IAADSYTFSCVLK-----------------------------CLAVVGNSRR---VKDAH 221
              D +T   VLK                             C A+V    R   +++A 
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172

Query: 222 KLFDELSDR---DVVSWNCMISGYIANGVAEKGLEVFKEMLNL------GFNVDLATMVT 272
            +FDE++ R   DV+SWN ++S ++ +  A   L++F +M  +          D+ ++V 
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  C +  A+   + VH  A++     ++   N L+D Y+KCG ++ A++VF  M  + 
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--------------------------- 365
           VVSW +M+AGY++ G F  A  LF+ M +E I                            
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352

Query: 366 --------PDVYAITSILHACACDGLLEIGKDVHDY-------IKENDM---QSSLYVSN 407
                   P+   I S+L ACA  G    G ++H Y         +ND       L V N
Sbjct: 353 QMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 412

Query: 408 ALMDMYAKCGSMADAESVFNQMPV--KDIVSWNTMIG----------ALDLFVAMLQN-- 453
           AL+DMY+KC S   A S+F+ +P+  +++V+W  MIG          AL LFV M+    
Sbjct: 413 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 472

Query: 454 -FEPDGVTMACILPACASLAALERGREIHGYILRHGI--SADRNVANAIVDMYVKCGVLV 510
              P+  T++CIL ACA LAA+  G++IH Y+LRH    S+   VAN +++MY KCG + 
Sbjct: 473 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVD 532

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            AR +FD +  K  ISWT M+ GYGMHG G +A+  F+ MR+AG  PD+++F+ VLYACS
Sbjct: 533 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 592

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
           H G+VD+G  +F+ M  +  + P+ EHYA  +DLL+R G L +A++ ++ MP+ P A +W
Sbjct: 593 HCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVW 652

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
            +LL  CR+H  V+LAE     + E+  +N G Y L++N+YA A +W++V ++R  + + 
Sbjct: 653 VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKS 712

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           G+KK PGCSW++ +     F  G  SHP + +I +LL+ L   +K  GY P+T +AL + 
Sbjct: 713 GIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDV 772

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           DE EK   L  HSEKLA+A+G+L    G  IR+TKNLRVCGDCH    ++SK    EIV+
Sbjct: 773 DEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVV 832

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RD +RFHHFK+G CSC G+W
Sbjct: 833 RDPSRFHHFKNGSCSCGGYW 852



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 251/513 (48%), Gaps = 67/513 (13%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           ++E+S  D  +  +IL  C  LK++   K+VH     +G  +D  V G+ L+  +  CG 
Sbjct: 221 TNERS--DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFV-GNALIDAYAKCGL 277

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           ++   +VFN ++   V  WN ++  YS++GNFK +  LFK M+   I             
Sbjct: 278 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPL----------- 326

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                                  D+V+W  +I+GY   G + + L VF++M+  G   + 
Sbjct: 327 -----------------------DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNC 363

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACF----------SKEISFNNTLLDMYSKCGD 317
            T+++VLS CA+ GA   G  +HA++LK C            +++   N L+DMYSKC  
Sbjct: 364 VTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 423

Query: 318 LDGAIRVFE--KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE--GIEPDVYAITS 373
              A  +F+   + ER+VV+WT MI G+A+ G  + A++LF  M+ E  G+ P+ Y I+ 
Sbjct: 424 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 483

Query: 374 ILHACACDGLLEIGKDVHDYI-KENDMQSSLY-VSNALMDMYAKCGSMADAESVFNQMPV 431
           IL ACA    + IGK +H Y+ + +   SS Y V+N L++MY+KCG +  A  VF+ M  
Sbjct: 484 ILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQ 543

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           K  +SW +M+           ALD+F  M +  F PD +T   +L AC+    +++G   
Sbjct: 544 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSY 603

Query: 481 HGYI-LRHGISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWTIMIAGYGMHG 538
              +   +G++         +D+  + G L  A +++ DM      + W  +++   +H 
Sbjct: 604 FDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHS 663

Query: 539 FGCDAIATFNDMRQAGIEPD-EVSFISVLYACS 570
               A    N + +   E D   + IS +YA +
Sbjct: 664 NVELAEHALNKLVEMNAENDGSYTLISNIYATA 696



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F    S    ++  Y  CG  D A+ V E++     V W  +I  + ++G  D AI +  
Sbjct: 47  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M+R G   D + +  +L AC        G   H  I  N  +S++++ NAL+ MY++CG
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 166

Query: 418 SMADAESVFN---QMPVKDIVSWNTMIG----------ALDLFVAML-------QNFEPD 457
           S+ +A  +F+   Q  + D++SWN+++           ALDLF  M         N   D
Sbjct: 167 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 226

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
            +++  ILPAC SL A+ + +E+HG  +R+G   D  V NA++D Y KCG++  A  +F+
Sbjct: 227 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 286

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
           M+  KD++SW  M+AGY   G    A   F +MR+  I  D V++ +V+   S  G   E
Sbjct: 287 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 346

Query: 578 GWRFFNMMRY 587
               F  M +
Sbjct: 347 ALNVFRQMIF 356



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 8/169 (4%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYC--SILQLCADLKSLEDGKKVHS 120
            +   IG   + G+   A+++     SE   +    Y    IL  CA L ++  GK++H+
Sbjct: 443 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 502

Query: 121 IICESGIVIDDG-VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
            +            + + L+ M+  CGD+   R VF+ +       W  +M  Y   G  
Sbjct: 503 YVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 562

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
            E+L +F KM+  G   D  TF  VL   +  G    V      FD +S
Sbjct: 563 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCG---MVDQGLSYFDSMS 608


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 286/750 (38%), Positives = 436/750 (58%), Gaps = 66/750 (8%)

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK--ESLYLFKKMQSLGIAADSYT 200
           +  G L     +F++I +  V  +N L+  YS +      + L+L+++M    +A ++YT
Sbjct: 68  IASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYT 127

Query: 201 FSCVLKCLAVVGNSRR--------------------------------VKDAHKLFDELS 228
           F   LK  + + +                                   + DA  +F  + 
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 187

Query: 229 DRDVVSWNCMISGYIANGVAEKG----LEVFKEMLNLGFNVDLATMVTVLSGCANCGALM 284
            RD+V+WN M++GY  +G+        L +  +M  L  N   +T+V +L   A  GAL 
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNA--STLVALLPLLAQQGALA 245

Query: 285 FGRAVHAFALKACFSKE----------ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            G +VHA+ ++AC              +     LLDMY+KCG L  A RVF+ M  R+ V
Sbjct: 246 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 305

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGI---EPDVYAITSILHACACDGLLEIGKDVH 391
           +W+++I G+        A  LF+ M+ +G+    P   +I S L ACA    L +G+ +H
Sbjct: 306 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLH 363

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
             + ++ + + L   N+L+ MYAK G +  A ++F++M VKD VS++ ++          
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423

Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            A  +F  M   N EPD  TM  ++PAC+ LAAL+ GR  HG ++  G++++ ++ NA++
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY KCG + L+R +F+M+P++D++SW  MIAGYG+HG G +A A F +M   G  PD V
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +FI +L ACSHSGLV EG  +F++M +   + P++EHY CMVDLLSR G L EAY FI+ 
Sbjct: 544 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 603

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+  D  +W +LL  CR++  + L +KV+  + EL P+ TG +VLL+N+Y+ A +++E 
Sbjct: 604 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 663

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            ++R     +G KK+PGCSWIEI G ++ FV G  SHP + +I   L  + + +K+ GY 
Sbjct: 664 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQ 723

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T + L + +E EKE AL  HSEKLA+A+GIL+L   +TI VTKNLRVCGDCH + K +
Sbjct: 724 PDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHI 783

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           S   RR I++RD+NRFHHFK+G+CSC  FW
Sbjct: 784 SLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 210/476 (44%), Gaps = 66/476 (13%)

Query: 46  CTINPISASISKTLVCKT-KNYNAEIGRFCEVGNLEKAMEVLYSSE----KSKIDTKTYC 100
           C   P +A I  T+  +    +NA +  +   G    A+  L S +    + + +  T  
Sbjct: 173 CACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLV 232

Query: 101 SILQLCADLKSLEDGKKVHSIICESGI--------VIDDGVL-GSKLVFMFVTCGDLKEG 151
           ++L L A   +L  G  VH+    + +         + DGVL G+ L+ M+  CG L   
Sbjct: 233 ALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 292

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT-FSCVLKCLAV 210
           RRVF+ +       W+ L+  +       ++  LFK M + G+   S T  +  L+  A 
Sbjct: 293 RRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACAS 352

Query: 211 VGNSRRVKDAH--------------------------------KLFDELSDRDVVSWNCM 238
           + + R  +  H                                 LFDE++ +D VS++ +
Sbjct: 353 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 412

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           +SGY+ NG AE+   VFK+M       D ATMV+++  C++  AL  GR  H   +    
Sbjct: 413 VSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL 472

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
           + E S  N L+DMY+KCG +D + +VF  M  R +VSW +MIAGY   G+   A  LF  
Sbjct: 473 ASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLE 532

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDV-----HDYIKENDMQSSLYVSNALMDMY 413
           M   G  PD      +L AC+  GL+  GK       H Y     M+  +     ++D+ 
Sbjct: 533 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI----CMVDLL 588

Query: 414 AKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLF---------VAMLQNFEPDGV 459
           ++ G + +A      MP++ D+  W  ++GA  ++           M+Q   P+G 
Sbjct: 589 SRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGT 644



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 15/274 (5%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
           T +Y+A +  + + G  E+A  V    +   +  D  T  S++  C+ L +L+ G+  H 
Sbjct: 406 TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 465

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            +   G+  +  +  + L+ M+  CG +   R+VFN + +  +  WN ++  Y   G  K
Sbjct: 466 SVIIRGLASETSICNA-LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGK 524

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE---LSDRDVVSWNC 237
           E+  LF +M +LG   D  TF C+L   +  G     K    +      L+ R +  + C
Sbjct: 525 EATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPR-MEHYIC 583

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+      G  ++  E  + M       D+   V +L  C     +  G+ V     +  
Sbjct: 584 MVDLLSRGGFLDEAYEFIQSM---PLRADVRVWVALLGACRVYKNIDLGKKVSRMIQE-- 638

Query: 298 FSKEISFNNTLL-DMYSKCGDLDGA--IRVFEKM 328
              E + N  LL ++YS  G  D A  +R+ +K+
Sbjct: 639 LGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKV 672



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 10/172 (5%)

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG--FGCDAIATFNDMRQAGIEPDEV 560
           ++  G L  A  LFD IP+ D+ ++  +I  Y         D +  +  M +  + P+  
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 561 SFISVLYACSHSGLVDEG-WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           +F   L AC  S L D    R  +       ++  L     ++D+  +   L +A     
Sbjct: 127 TFPFALKAC--SALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFA 184

Query: 620 MMPVAPDATIWGSLLCGCR----IHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            MP A D   W ++L G       HH V     +   +  L P+ +    LL
Sbjct: 185 TMP-ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 235


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 282/771 (36%), Positives = 433/771 (56%), Gaps = 56/771 (7%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY- 173
           GK  H+ I  SG    D  L + L+ M+  CG L   R+VF+      +  WN ++  Y 
Sbjct: 96  GKCTHARIVVSGSA-GDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 154

Query: 174 ----SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------CL--------------- 208
               S  GN +E L+LF+ +++   +    T + VLK      CL               
Sbjct: 155 ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 214

Query: 209 -----------AVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                       +     R++DA  LFD + +RDVV WN M+ GY+  G+ ++  ++F E
Sbjct: 215 EWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSE 274

Query: 258 MLNLGFNVDLATMVTVLSGCANCGA--LMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
               G   D  ++  +L+GC   G   L  G+ VH  A+K+    ++S  N+L++MYSK 
Sbjct: 275 FHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKM 334

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G    A  VF  M    ++SW SMI+  A+  + + ++ LF  ++ EG++PD + + SI 
Sbjct: 335 GCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASIT 394

Query: 376 -----HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
                 AC C  LL+ GK +H +  +    S L+V++ ++DMY KCG M +A  VFN + 
Sbjct: 395 LATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYIS 454

Query: 431 VKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGRE 479
             D V+W +MI           AL ++  M Q+   PD  T A ++ A + + ALE+GR+
Sbjct: 455 APDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQ 514

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +H  +++    +D  V  ++VDMY KCG +  A  LF  +  +++  W  M+ G   HG 
Sbjct: 515 LHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGN 574

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
             +A+  F  M+  GIEPD VSFI +L ACSH+GL  E + + + M  +  IEP++EHY+
Sbjct: 575 AEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYS 634

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           C+VD L R G + EA + IE MP    A+I  +LL  CRI  +V+  ++VA  +F LEP 
Sbjct: 635 CLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPF 694

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           ++  YVLL+N+YA A +W++V   R+ + R+ +KK+PG SWI++K  +++FV    SHP 
Sbjct: 695 DSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQ 754

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
           A  I   ++ +   ++ +GY P T + L++ ++ EKE +L  HSEKLA+A+G+++ PA  
Sbjct: 755 ADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPAST 814

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           TIRV KNLRVCGDCH   K++SK   REIVLRD+NRFHHF+DG CSC  +W
Sbjct: 815 TIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 193/398 (48%), Gaps = 41/398 (10%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L+ G+  HA  + +  + +   +N LL MYSKCG L  A +VF+   ER +V+W +++  
Sbjct: 93  LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 152

Query: 343 YA-----REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           YA      +G     + LFR +           +  +L  C   G L   + VH Y  + 
Sbjct: 153 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI 212

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
            ++  ++VS AL+++Y+KCG M DA  +F+ M  +D+V WN M+           A  LF
Sbjct: 213 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 272

Query: 448 VAMLQN-FEPDGVTMACILPAC--ASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
               ++   PD  ++  IL  C  A    LE G+++HG  ++ G+ +D +VAN++V+MY 
Sbjct: 273 SEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYS 332

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           K G    AR +F+ +   DLISW  MI+         +++  F D+   G++PD  +  S
Sbjct: 333 KMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLAS 392

Query: 565 VLYACSHSG-----LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA---YR 616
           +  A +        L+D+G +  +    +   +  L   + ++D+  + G++  A   + 
Sbjct: 393 ITLATAAKACGCLVLLDQG-KQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN 451

Query: 617 FIEMMPVAPDATIWGSLLCGC----------RIHHEVK 644
           +I     APD   W S++ GC          RI+H ++
Sbjct: 452 YIS----APDDVAWTSMISGCVDNGNEDQALRIYHRMR 485



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 138/317 (43%), Gaps = 36/317 (11%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  +  + C  L  L+ GK++H+   ++G   D  V  S ++ M++ CGD+     VFN 
Sbjct: 394 TLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHV-NSGILDMYIKCGDMVNAGIVFNY 452

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNS 214
           I       W  ++      GN  ++L ++ +M+   +  D YTF+ ++K   C+  +   
Sbjct: 453 ISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQG 512

Query: 215 RR-----------------------------VKDAHKLFDELSDRDVVSWNCMISGYIAN 245
           R+                             ++DA++LF +++ R++  WN M+ G   +
Sbjct: 513 RQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQH 572

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISF 304
           G AE+ + +FK M + G   D  + + +LS C++ G        +H+         EI  
Sbjct: 573 GNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEH 632

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR-EGVFDGAIRL-FRGMVRE 362
            + L+D   + G +  A +V E M  ++  S    + G  R +G  +   R+  R    E
Sbjct: 633 YSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALE 692

Query: 363 GIEPDVYAITSILHACA 379
             +   Y + S ++A A
Sbjct: 693 PFDSAAYVLLSNIYAAA 709


>gi|125524834|gb|EAY72948.1| hypothetical protein OsI_00820 [Oryza sativa Indica Group]
          Length = 370

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/370 (66%), Positives = 291/370 (78%)

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           MACILP  ASL++LERGRE+H Y +R G   D  VANA+VDMYVKCG L+LAR LFDM+ 
Sbjct: 1   MACILPTAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLT 60

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
            K+LISWTIMIAGYGMHG G DAIA F  M+ +GI+PD  SF ++LYACSHSGL DEGWR
Sbjct: 61  NKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWR 120

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           FFN MR E  IEPKL+HYACMVDLL  TGNL EAY FIE MP+ PD++IW SLL GCRIH
Sbjct: 121 FFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIH 180

Query: 641 HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSW 700
             VKLAEKVAE VFELEP+NTGYYVLLAN+YAEAE+WE V+KL+ K+  RGL++N GCSW
Sbjct: 181 RNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSW 240

Query: 701 IEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALC 760
           IE++GK +IF A   +HP   +I   L  +   M+ EG+ PK +YAL+ AD+   + ALC
Sbjct: 241 IEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALC 300

Query: 761 GHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFK 820
           GHS KLA+AFG+LNL  G+ IRVTKN RVC  CHE AKF+SK   REI+LRDSNRFHHF+
Sbjct: 301 GHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFE 360

Query: 821 DGRCSCRGFW 830
           +GRCSCRG+W
Sbjct: 361 EGRCSCRGYW 370



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 97/174 (55%), Gaps = 2/174 (1%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           M  +L   A+  +L  GR +HA+A++  + ++    N L+DMY KCG L  A R+F+ + 
Sbjct: 1   MACILPTAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLT 60

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            ++++SWT MIAGY   G    AI LF  M   GI+PD  + ++IL+AC+  GL + G  
Sbjct: 61  NKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWR 120

Query: 390 VHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
             + ++ E+ ++  L     ++D+    G++ +A      MP++ D   W +++
Sbjct: 121 FFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLL 174



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 12/181 (6%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           IL   A L SLE G+++H+     G  ++D  + + LV M+V CG L   RR+F+ + N 
Sbjct: 4   ILPTAASLSSLERGREMHAYAVRRG-YLEDNFVANALVDMYVKCGALLLARRLFDMLTNK 62

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
            +  W +++  Y   G  ++++ LF++M+  GI  D+ +FS +L   +  G      +  
Sbjct: 63  NLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLR---DEGW 119

Query: 222 KLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + F+ + +   +      + CM+      G  ++  E  + M       D +  V++L G
Sbjct: 120 RFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETM---PIEPDSSIWVSLLRG 176

Query: 277 C 277
           C
Sbjct: 177 C 177



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/252 (20%), Positives = 101/252 (40%), Gaps = 42/252 (16%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A +LFD L++++++SW  MI+GY  +G     + +F++M   G   D  +   +L  C++
Sbjct: 52  ARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSH 111

Query: 280 CGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
            G    G R  +A   +     ++     ++D+    G+L  A    E M          
Sbjct: 112 SGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETM---------- 161

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
                                    IEPD     S+L  C     +++ + V + + E +
Sbjct: 162 ------------------------PIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELE 197

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VSWNTMIGALDLFVAMLQN 453
            +++ Y    L ++YA+         + N++  + +      SW  + G   +F A  +N
Sbjct: 198 PENTGYYV-LLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRN 256

Query: 454 FEPDGVTMACIL 465
             P G+ +A  L
Sbjct: 257 -HPQGMRIAEFL 267


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 283/811 (34%), Positives = 458/811 (56%), Gaps = 62/811 (7%)

Query: 71  GRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           GR+ E   L K M VL  S    +D  T+  +L+ C   K    G ++H      G+ + 
Sbjct: 127 GRYVEAIELYKEMRVLGVS----LDAFTFPCVLKACGAFKERRLGCEIH------GVAVK 176

Query: 131 DGVLG-----SKLVFMFVTCGDLKEGRRVFNK--IDNGKVFIWNLLMHEYSKTGNFKESL 183
            G  G     + L+ M+  CGDL   R +F+   ++      WN ++  +   G   E+L
Sbjct: 177 CGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEAL 236

Query: 184 YLFKKMQSLGIAADSYTFSCVLKC--------------------------------LAVV 211
            LF++MQ +G+ +++YTF   L+                                 +A+ 
Sbjct: 237 SLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMY 296

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
            N  +++DA ++F  +  +D VSWN ++SG + N +    +  F++M + G   D  +++
Sbjct: 297 ANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVL 356

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
            +++       L+ G  VHA+A+K      +   N+L+DMY KC  +      FE M E+
Sbjct: 357 NMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEK 416

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            ++SWT++IAGYA+      A+ L R +  E ++ D   I SIL AC+     ++ K++H
Sbjct: 417 DLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIH 476

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
            Y+ +  + + + + NA++++Y +   +  A  VF  +  KDIVSW +MI          
Sbjct: 477 GYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAI 535

Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            AL+LF ++++ N EPD +T+  +L A A+L++L++G+EIHG+++R G   +  +AN++V
Sbjct: 536 EALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLV 595

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY +CG +  AR++F+ +  +DLI WT MI   GMHG G DAI  F+ M    + PD +
Sbjct: 596 DMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHI 655

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+++LYACSHSGLV EG + F +M+ E  +EP  EHYAC+VDLL+R+ +L EAY F+  
Sbjct: 656 TFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRN 715

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ P A +W +LL  CRIH    L E  A+ + +L  +N+G YVL++N +A   +W +V
Sbjct: 716 MPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDV 775

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL-RLEMKREGY 739
           +++R  +    LKK PGCSWIE++ K++ F+A   SHP    I   L +  +L  ++ GY
Sbjct: 776 EEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGY 835

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
             +T+    +  E EK   L GHSE+LA+ +G+L    G  +R+TKNLR+C DCH   K 
Sbjct: 836 RAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKI 895

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            S+ ++R +V+RD++RFHHF+ G CSC  FW
Sbjct: 896 ASEISQRTLVVRDASRFHHFERGLCSCGDFW 926



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 177/621 (28%), Positives = 315/621 (50%), Gaps = 56/621 (9%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + Y   L+LCA  K+L  G+++H+   ++   +D   L +K V M+  CG   +  +VF+
Sbjct: 47  QAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFD 106

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---------- 206
           K+    +F WN ++      G + E++ L+K+M+ LG++ D++TF CVLK          
Sbjct: 107 KMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRL 166

Query: 207 -------------------CLAVVGNSRRVKD---AHKLFDE--LSDRDVVSWNCMISGY 242
                              C A++    +  D   A  LFD   +   D VSWN +IS +
Sbjct: 167 GCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAH 226

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           +  G + + L +F+ M  +G   +  T V+ L  C     +  GR +HA  LK+    ++
Sbjct: 227 VGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDV 286

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
             +N L+ MY+ CG ++ A RVF+ M  +  VSW ++++G  +  ++  AI  F+ M   
Sbjct: 287 YVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDS 346

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G +PD  ++ +++ A      L  G +VH Y  ++ + S++++ N+L+DMY KC  +   
Sbjct: 347 GQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYM 406

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
            S F  MP KD++SW T+I           AL+L   + L+  + D + +  IL AC+ L
Sbjct: 407 GSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGL 466

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            + +  +EIHGY+L+ G+ AD  + NAIV++Y +  ++  AR +F+ I +KD++SWT MI
Sbjct: 467 KSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMI 525

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECN 590
                +G   +A+  FN + +  IEPD ++ +SVLYA +    + +G      ++R    
Sbjct: 526 TCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFF 585

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH----HEVKLA 646
           +E  + +   +VD+ +R G +  A      +    D  +W S++    +H      + L 
Sbjct: 586 LEGLIAN--SLVDMYARCGTMENARNIFNYVK-QRDLILWTSMINANGMHGCGKDAIDLF 642

Query: 647 EKVAEHVFELEPDNTGYYVLL 667
            K+ +    + PD+  +  LL
Sbjct: 643 SKMTDE--NVLPDHITFLALL 661


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 280/733 (38%), Positives = 418/733 (57%), Gaps = 60/733 (8%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           FV  G +     +F K+++   FIWN+++  Y+  G F+E++  + +M+  GI +D++TF
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 202 SCVLKCLA-----VVGNSRR---------------------------VKDAHKLFDELSD 229
             V+K        +VG                               ++ A K+FDE+  
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           RD+VSWN M+SGY  +G     L  FKEML LG   D   M++ L  C+    L  G  +
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H   +++    +I    +L+DMY KCG +D A RVF ++  +++V+W +MI G   +   
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQED--- 304

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
                       + + PDV  + ++L +C+  G L  GK +H +         L +  AL
Sbjct: 305 ------------DKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETAL 352

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNFEPDG 458
           +DMY KCG +  AE VFNQM  K++VSWNTM+ A          L +F  +L +  +PD 
Sbjct: 353 VDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDA 412

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           +T+A +LPA A LA+   G++IH YI++ G+ ++  ++NAIV MY KCG L  AR  FD 
Sbjct: 413 ITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDG 472

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +  KD++SW  MI  Y +HGFG  +I  F++MR  G +P+  +F+S+L ACS SGL+DEG
Sbjct: 473 MVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEG 532

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
           W FFN M+ E  I+P +EHY CM+DLL R GNL EA  FIE MP+ P A IWGSLL   R
Sbjct: 533 WGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASR 592

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
            H++V LAE  A H+  L+ DNTG YVLL+N+YAEA +WE+V +++  +  +GL K  GC
Sbjct: 593 NHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGC 652

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK-TRYALINADEMEKEV 757
           S ++I G+   F+    SH H   I  +L  L  ++  + Y    T++  ++  + ++  
Sbjct: 653 SMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHSLTKFRPLDVAK-KRGN 711

Query: 758 ALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFH 817
           +   HS KLA+ FG+++   G  + V KN R+C DCH  AK +S+  +REIV+ D+  FH
Sbjct: 712 SPEYHSVKLAICFGLISTAIGNPVIVRKNTRICDDCHRAAKKISQVTKREIVVGDAKVFH 771

Query: 818 HFKDGRCSCRGFW 830
           HF+DG CSCR +W
Sbjct: 772 HFRDGCCSCRDYW 784



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 242/501 (48%), Gaps = 62/501 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  I  +   G  ++A++  Y  E   I  D  T+  +++ C +L +L  G+KVH  + 
Sbjct: 92  WNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLI 151

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G  +D  V  + L+ M++  G ++   +VF+++    +  WN ++  Y   G+   SL
Sbjct: 152 KIGFDLDVYVC-NFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSL 210

Query: 184 YLFKKMQSLGIAADSYTFSCVL------KCLA--------------------------VV 211
             FK+M  LG  AD +     L       CL                           + 
Sbjct: 211 MCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMY 270

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
           G   +V  A ++F+ +  +++V+WN MI G       ++  +V           D+ TM+
Sbjct: 271 GKCGKVDYAERVFNRIYSKNIVAWNAMIGG------MQEDDKVIP---------DVITMI 315

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
            +L  C+  GAL+ G+++H FA++  F   +     L+DMY KCG+L  A  VF +M E+
Sbjct: 316 NLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEK 375

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           ++VSW +M+A Y +   +  A+++F+ ++ E ++PD   I S+L A A       GK +H
Sbjct: 376 NMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIH 435

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------- 443
            YI +  + S+ ++SNA++ MYAKCG +  A   F+ M  KD+VSWNTMI A        
Sbjct: 436 SYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGR 495

Query: 444 --LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVANAI 499
             +  F  M  + F+P+G T   +L AC+    ++ G      + + +GI         +
Sbjct: 496 TSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCM 555

Query: 500 VDMYVKCGVLVLARSLFDMIP 520
           +D+  + G L  A+   + +P
Sbjct: 556 LDLLGRNGNLDEAKCFIEEMP 576


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 278/733 (37%), Positives = 430/733 (58%), Gaps = 48/733 (6%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G L   R+VF++I       +N L+  YS  G F  ++ L++ M    +  + YTF  VL
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 206 KCLAVVGN--SRRVKDAH------------------------------KLFDELSDRDVV 233
           K  + + +  + R   AH                               +F ++  RDVV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           +WN M++GY  +G+    +    +M + G    + +T+V++L   A  GAL  G +VHA+
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226

Query: 293 ALKACFSK---EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
            L+A   +   ++     LLDMY+KC  L  A RVF  M  R+ V+W+++I G+      
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286

Query: 350 DGAIRLFRGMVREGI-EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
             A  LF+ M+ EG+      ++ S L  CA    L +G  +H  + ++ + + L   N+
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNS 346

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPD 457
           L+ MYAK G + +A  +F+++ +KD +S+  ++           A  +F  M   N +PD
Sbjct: 347 LLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPD 406

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
             TM  ++PAC+ LAAL+ GR  HG ++  G++ + ++ N+++DMY KCG + L+R +FD
Sbjct: 407 IATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFD 466

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            +PA+D++SW  MIAGYG+HG G +A   F  M+  G EPD+V+FI ++ ACSHSGLV E
Sbjct: 467 KMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTE 526

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           G  +F+ M ++  I P++EHY CMVDLL+R G L EAY+FI+ MP+  D  +WG+LL  C
Sbjct: 527 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGAC 586

Query: 638 RIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPG 697
           RIH  + L ++V+  + +L P+ TG +VLL+N+++ A +++E  ++R     +G KK+PG
Sbjct: 587 RIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 646

Query: 698 CSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEV 757
           CSWIEI G ++ FV G  SHP +  I   L  + +++K+ GY   T + L + +E EKE 
Sbjct: 647 CSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKEK 706

Query: 758 ALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFH 817
           AL  HSEKLA+AFG+L+L   +TI VTKNLRVCGDCH   K+M+    R I++RD+NRFH
Sbjct: 707 ALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFH 766

Query: 818 HFKDGRCSCRGFW 830
           HFK+G+CSC  FW
Sbjct: 767 HFKNGQCSCGDFW 779



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 240/527 (45%), Gaps = 53/527 (10%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
            + YNA I  +   G    A+++  S    ++  +  T+  +L+ C+ L  L  G+ +H+
Sbjct: 64  ARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHA 123

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
                G+  D  V  + L+ +++ C        VF K+    V  WN ++  Y+  G + 
Sbjct: 124 HAAAVGLHTDLFV-STALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYH 182

Query: 181 ESLYLFKKMQSL-GIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------ 221
            ++     MQ   G+  ++ T   +L  LA  G   +    H                  
Sbjct: 183 HAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIG 242

Query: 222 -----------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                            ++F  ++ R+ V+W+ +I G++      +   +FK+ML  G  
Sbjct: 243 TALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMC 302

Query: 265 VDLATMV-TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
              AT V + L  CA+   L  G  +HA   K+    +++  N+LL MY+K G ++ A  
Sbjct: 303 FLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATM 362

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           +F+++  +  +S+ ++++GY + G  + A  +F+ M    ++PD+  + S++ AC+    
Sbjct: 363 LFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAA 422

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           L+ G+  H  +    +     + N+L+DMYAKCG +  +  VF++MP +DIVSWNTMI  
Sbjct: 423 LQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAG 482

Query: 443 ---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISA 491
                    A  LF++M  Q FEPD VT  C++ AC+    +  G+     +  ++GI  
Sbjct: 483 YGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILP 542

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
                  +VD+  + G L  A      +P K D+  W  ++    +H
Sbjct: 543 RMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIH 589



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 208/463 (44%), Gaps = 57/463 (12%)

Query: 50  PISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLC 106
           P +   +K  +     +NA +  +   G    A+  L   +     + +  T  S+L L 
Sbjct: 152 PAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLL 211

Query: 107 ADLKSLEDGKKVHSIICESGIVIDDG--VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVF 164
           A   +L  G  VH+    + +  ++   ++G+ L+ M+  C  L    RVF+ +      
Sbjct: 212 AQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEV 271

Query: 165 IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT-FSCVLKCLAVVGNSRR------- 216
            W+ L+  +       E+  LFK M   G+   S T  +  L+  A + + R        
Sbjct: 272 TWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHAL 331

Query: 217 -------------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
                                    + +A  LFDE++ +D +S+  ++SGY+ NG AE+ 
Sbjct: 332 LAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEA 391

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
             VFK+M       D+ATMV+++  C++  AL  GR  H   +    + E S  N+L+DM
Sbjct: 392 FLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDM 451

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+KCG +D + +VF+KM  R +VSW +MIAGY   G+   A  LF  M  +G EPD    
Sbjct: 452 YAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTF 511

Query: 372 TSILHACACDGLLEIGKD-----VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
             ++ AC+  GL+  GK       H Y     M+  +     ++D+ A+ G + +A    
Sbjct: 512 ICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGFLDEAYQFI 567

Query: 427 NQMPVK-DIVSWNTMIGA------LDL---FVAMLQNFEPDGV 459
             MP+K D+  W  ++GA      +DL      M+Q   P+G 
Sbjct: 568 QSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGT 610



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 116/490 (23%), Positives = 207/490 (42%), Gaps = 80/490 (16%)

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           L+ +   G L  A +VF+++      ++ ++I  Y+  G F  AI L+R M+   + P+ 
Sbjct: 40  LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           Y    +L AC+    L  G+ +H +     + + L+VS AL+D+Y +C     A +VF +
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159

Query: 429 MPVKDIVSWNTMI------GALDLFVAMLQNFE------PDGVTMACILPACASLAALER 476
           MP++D+V+WN M+      G     +A L + +      P+  T+  +LP  A   AL +
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQ 219

Query: 477 GREIHGYILRHGISADRN---VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           G  +H Y LR  +  +     +  A++DMY KC  LV A  +F  +  ++ ++W+ +I G
Sbjct: 220 GTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGG 279

Query: 534 YGMHGFGCDAIATFNDM------------------------------------RQAGIEP 557
           + +     +A   F DM                                     ++GI  
Sbjct: 280 FVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHA 339

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           D  +  S+L   + +GL++E    F+ +  +  I      Y  ++    + G   EA+  
Sbjct: 340 DLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTIS-----YGALLSGYVQNGKAEEAFLV 394

Query: 618 IEMMP---VAPDATIWGSLLCGCRIHHEVKLAEKVAEH---VFELEPDNTGYYVLLANVY 671
            + M    V PD     SL+  C   H   L      H   +       T     L ++Y
Sbjct: 395 FKKMQACNVQPDIATMVSLIPACS--HLAALQHGRCSHGSVIIRGLALETSICNSLIDMY 452

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           A+  + +  +++ +K+  R +      SW       N  +AG   H   K+  +L     
Sbjct: 453 AKCGRIDLSRQVFDKMPARDI-----VSW-------NTMIAGYGIHGLGKEATTLF---- 496

Query: 732 LEMKREGYFP 741
           L MK +G+ P
Sbjct: 497 LSMKNQGFEP 506


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 286/674 (42%), Positives = 388/674 (57%), Gaps = 43/674 (6%)

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLF--DELSDRDVVSWNCMISGYIANGVAEKGLEV 254
           + + F+ +L   A +G    V DA +LF        D+V+WN MIS  +  G  E+ ++V
Sbjct: 191 ERFPFNALLSMYARLG---LVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQV 247

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF-NNTLLDMYS 313
             +M+ LG   D  T  + L  C+    L  GR VHAF LK       SF  + L+DMY+
Sbjct: 248 LYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYA 307

Query: 314 KCGDLDGAIRVFEKMGE--RSVVSWTSMIAGYAREGVFDG-AIRLFRGMVRE-GIEPDVY 369
               +  A RVF+ + E  R +  W +MI GYA+ G  D  AI LF  M  E G  P   
Sbjct: 308 SNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSET 367

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            +  +L ACA   +    + VH Y+ + DM S+ +V NALMDMYA+ G M +A ++F  +
Sbjct: 368 TMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMI 427

Query: 430 PVKDIVSWNTMIG----------ALDLFVAML---------------------QNFEPDG 458
            ++DIVSWNT+I           A  L   M                      Q   P+ 
Sbjct: 428 DLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNN 487

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           +T+  +LP CA LAA  RG+EIHGY +RH + +D  V +A+VDMY KCG L LAR++FD 
Sbjct: 488 ITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDR 547

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDE 577
           +P +++I+W ++I  YGMHG G +A+A F+ M   G   P+EV+FI+ L ACSHSGLVD 
Sbjct: 548 LPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDR 607

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE-MMPVAPDATIWGSLLCG 636
           G   F  M+ +   EP    +AC+VD+L R G L EAY  I  M P     + W ++L  
Sbjct: 608 GLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGA 667

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
           CR+H  VKL    AE +FELEPD   +YVLL N+Y+ A  WE   ++R  + +RG+ K P
Sbjct: 668 CRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEP 727

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
           GCSWIE+ G ++ F+AG S+HP + ++ + +  L   M+REGY P T   L + DE EK 
Sbjct: 728 GCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKA 787

Query: 757 VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
             L  HSEKLA+AFG+L  P G TIRV KNLRVC DCHE AKF+S+   REIVLRD  RF
Sbjct: 788 AMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRF 847

Query: 817 HHFKDGRCSCRGFW 830
           HHF+DG CSC  +W
Sbjct: 848 HHFRDGTCSCGDYW 861



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 196/413 (47%), Gaps = 42/413 (10%)

Query: 287 RAVHAFALKACF--SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE--RSVVSWTSMIAG 342
           RA+H  +L+         + +N LL  Y++CGDLD A+ +F       R  VS+ S+I+ 
Sbjct: 68  RAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISA 127

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA--CDGLLEIGKDVHDYIKEN--- 397
                 +  A+   R M+ +  E   + + S+L AC+   D    +G++ H +  ++   
Sbjct: 128 LCLFRRWGHALDALRDMLADH-EVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFL 186

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVF--NQMPVKDIVSWNTMIGAL----------- 444
           D     +  NAL+ MYA+ G + DA+ +F  +   V D+V+WNTMI  L           
Sbjct: 187 DKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQ 246

Query: 445 DLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMY 503
            L+  +     PDGVT A  LPAC+ L  L  GRE+H ++L+   ++A+  VA+A+VDMY
Sbjct: 247 VLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMY 306

Query: 504 VKCGVLVLARSLFDMIP--AKDLISWTIMIAGYGMHGFGCD--AIATFNDMR-QAGIEPD 558
                +  AR +FDM+P   + L  W  MI GY  HG G D  AI  F+ M  +AG  P 
Sbjct: 307 ASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHG-GMDEEAIELFSRMEAEAGCAPS 365

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
           E +   VL AC+ S +          +        +    A M D+ +R G + EA+   
Sbjct: 366 ETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALM-DMYARLGRMDEAHTIF 424

Query: 619 EMMPVAPDATIWGSLLCGCRIH----------HEVKLAEKVAEHVFELEPDNT 661
            M+ +  D   W +L+ GC +            E++L    A     LE D+T
Sbjct: 425 AMIDLR-DIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDT 476


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 281/753 (37%), Positives = 425/753 (56%), Gaps = 47/753 (6%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           KK+H+++   G    + VL +KL+ ++VT GD+   R  F+ I    +F WN ++  Y +
Sbjct: 39  KKLHALLLVFGKS-QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVR 97

Query: 176 TGNFKESLYLFKKMQSL----GIAADSYTFSCVLK-CLAVVGNSRR-------------- 216
            G + E++    ++ S+     +  D YTF  +LK C+++V   +               
Sbjct: 98  FGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVF 157

Query: 217 --------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                         +  AHK+F ++  +DV SWN MISG+  NG A   L V   M   G
Sbjct: 158 VAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEG 217

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
             +D  T+ ++L  CA    ++ G  +H   LK     ++  +N L++MYSK G L  A 
Sbjct: 218 VKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQ 277

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
            VF++M  R +VSW S+IA Y +      A+R F+GM   GI PD+  + S+    +   
Sbjct: 278 MVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLS 337

Query: 383 LLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
              I + +  + I+   +   + + NAL++MYAK G M  A +VF+Q+P KD +SWNT++
Sbjct: 338 DQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLV 397

Query: 442 G----------ALDLFVAM--LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
                      A+D +  M   ++  P+  T   I+PA + + AL++G +IH  ++++ +
Sbjct: 398 TGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSL 457

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             D  VA  ++D+Y KCG L  A SLF  IP    + W  +IA  G+HG G +A+  F D
Sbjct: 458 YLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKD 517

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M    ++ D ++F+S+L ACSHSGLVDEG + F++M+ E  I+P L+HY CMVDLL R G
Sbjct: 518 MLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAG 577

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
            L +AY  +  MP+ PDA+IWG+LL  C+I+   +L    ++ + E++ +N GYYVLL+N
Sbjct: 578 YLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSN 637

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           +YA  EKWE V K+R     RGL+K PG S + +  K  +F  G  +HP   +I   LK 
Sbjct: 638 IYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKV 697

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
           L  +MK  GY P   +   + +E EKE  L  HSE+LA+AFGI++ P    IR+ KNLRV
Sbjct: 698 LSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRV 757

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
           CGDCH   K++S+ + REIV+RDSNRFHHFKDG
Sbjct: 758 CGDCHNATKYISRISEREIVVRDSNRFHHFKDG 790



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 201/421 (47%), Gaps = 39/421 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  FC+ GN   A+ VL     E  K+DT T  SIL +CA    + +G  +H  +
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV 248

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+   D  + + L+ M+   G L++ + VF++++   +  WN ++  Y +  +   +
Sbjct: 249 LKHGL-DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTA 307

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD----------------------- 219
           L  FK MQ  GI  D  T   +    + + + R  +                        
Sbjct: 308 LRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVN 367

Query: 220 ----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLA 268
                     AH +FD+L  +D +SWN +++GY  NG+A + ++ +  M      + +  
Sbjct: 368 MYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQG 427

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V+++   ++ GAL  G  +HA  +K     ++     L+D+Y KCG L+ A+ +F ++
Sbjct: 428 TWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEI 487

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
              + V W ++IA     G  + A++LF+ M+ E ++ D     S+L AC+  GL++ G+
Sbjct: 488 PRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQ 547

Query: 389 DVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
              D + KE  ++ SL     ++D+  + G +  A  +   MP++ D   W  ++ A  +
Sbjct: 548 KCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKI 607

Query: 447 F 447
           +
Sbjct: 608 Y 608


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 258/657 (39%), Positives = 387/657 (58%), Gaps = 43/657 (6%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + D+ +LF+ +     ++W  +I  Y ++G+  + L  F  ML  G   D     +VL  
Sbjct: 56  LHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKS 115

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK-------------CGDL----- 318
           CA    L  G ++H + ++     ++   N L++MYSK              G++     
Sbjct: 116 CALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMT 175

Query: 319 --------------DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
                         D   ++FE M E+ +VSW ++IAG AR G+++  +R+ R M    +
Sbjct: 176 ERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANL 235

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           +PD + ++S+L   A +  +  GK++H       + + +YV+++L+DMYAKC  +AD+  
Sbjct: 236 KPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCR 295

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAA 473
           VF  +  +D +SWN++I            L  F  ML    +P   + + I+PACA L  
Sbjct: 296 VFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTT 355

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           L  G+++HGYI R+G   +  +A+++VDMY KCG +  A+ +FD +  +D++SWT MI G
Sbjct: 356 LHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMG 415

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
             +HG   DAI  F  M   GI+P+ V+F++VL ACSH GLVDE W++FN M  +  I P
Sbjct: 416 CALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAP 475

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            +EHYA + DLL R G L EAY FI  M + P  +IW +LL  CR+H  + +AEKVA  +
Sbjct: 476 GVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRI 535

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
            E++P+NTG Y+LLAN+Y+ A +W+E  K R  + R G++K P CSWIE+K KV  F+AG
Sbjct: 536 LEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAG 595

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
             SHP  +KI   ++ L   M++EGY P T     + +E +K+  +C HSE+LA+ FGI+
Sbjct: 596 DESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGII 655

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           N PAG TIRVTKNLRVC DCH   KF+SK   REIV+RD++RFHHFK+G CSC  +W
Sbjct: 656 NTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 209/428 (48%), Gaps = 52/428 (12%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D   + S+L+ CA L  L  G+ +H  I   G+  D                        
Sbjct: 105 DHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFD------------------------ 140

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT-FSCVLKCLAVVGN 213
                   ++  N LM+ YSK    +ES    ++    G   D  T  +  ++ ++V+  
Sbjct: 141 --------LYTGNALMNMYSKLRFLEES---GRQRLGAGEVFDEMTERTRSVRTVSVLSE 189

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
                   K+F+ + ++D+VSWN +I+G   NG+ E+ L + +EM       D  T+ +V
Sbjct: 190 D----SVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSV 245

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L   A    +  G+ +H  +++     +I   ++L+DMY+KC  +  + RVF  + ER  
Sbjct: 246 LPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDG 305

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           +SW S+IAG  + G+FD  +R FR M+   I+P  Y+ +SI+ ACA    L +GK +H Y
Sbjct: 306 ISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGY 365

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GA 443
           I  N    +++++++L+DMYAKCG++  A+ +F++M ++D+VSW  MI           A
Sbjct: 366 ITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDA 425

Query: 444 LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIVD 501
           ++LF  M  +  +P+ V    +L AC+    ++   +    + R  GI+       A+ D
Sbjct: 426 IELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSD 485

Query: 502 MYVKCGVL 509
           +  + G L
Sbjct: 486 LLGRAGRL 493



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 192/403 (47%), Gaps = 47/403 (11%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           +YS    L  ++R+F  +     ++W S+I  Y   G+   ++  F GM+  G+ PD   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK-------------CG 417
             S+L +CA    L +G+ +H YI    +   LY  NALM+MY+K              G
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 418 SMAD-------------------AESVFNQMPVKDIVSWNTMI------GALDLFVAMLQ 452
            + D                      +F  MP KD+VSWNT+I      G  +  + M++
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 453 -----NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
                N +PD  T++ +LP  A    + RG+EIHG  +R G+ AD  VA++++DMY KC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            +  +  +F ++  +D ISW  +IAG   +G   + +  F  M  A I+P   SF S++ 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           AC+H   +  G +    +      +  +   + +VD+ ++ GN+  A +  + M +  D 
Sbjct: 349 ACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DM 406

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
             W +++ GC +H +   A ++ E +    ++P++  +  +L 
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLT 449



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 33/221 (14%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D+ T  S+L L A+   +  GK++H      G+  D  V  S L+ M+  C  + +  
Sbjct: 236 KPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYV-ASSLIDMYAKCTRVADSC 294

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--- 209
           RVF  +       WN ++    + G F E L  F++M    I   SY+FS ++   A   
Sbjct: 295 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLT 354

Query: 210 -----------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                        +      ++ A ++FD +  RD+VSW  MI 
Sbjct: 355 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIM 414

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           G   +G A   +E+F++M   G   +    + VL+ C++ G
Sbjct: 415 GCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGG 455



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 85/167 (50%), Gaps = 8/167 (4%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSII 122
           ++N+ I    + G  ++ +        +KI  K+Y   SI+  CA L +L  GK++H  I
Sbjct: 307 SWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 366

Query: 123 CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             +G   D+ + + S LV M+  CG+++  +++F+++    +  W  ++   +  G   +
Sbjct: 367 TRNG--FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPD 424

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           ++ LF++M++ GI  +   F  VL   +  G    V +A K F+ ++
Sbjct: 425 AIELFEQMETEGIKPNHVAFMAVLTACSHGG---LVDEAWKYFNSMT 468


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 279/814 (34%), Positives = 455/814 (55%), Gaps = 59/814 (7%)

Query: 72  RFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVI 129
           R  +VG L  A   L   + + +  D  TY  +L+ C   ++ + GK VH  + +SG+ +
Sbjct: 18  RQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLEL 77

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI-WNLLMHEYSKTGNFKESLYLFKK 188
           D  VL + L+ ++  CGD +  R +F  + N +  + W+ ++  ++      ++++ F  
Sbjct: 78  DSVVLNT-LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLD 136

Query: 189 MQSLGIAADSYTFSCVLKCLA----------------------------------VVGNS 214
           M  LG   + Y F+ V++  +                                   V  S
Sbjct: 137 MLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGS 196

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             +  A+K+FD++ +R++V+W  MI+ +   G A   +++F +M   G+  D  T  +VL
Sbjct: 197 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 256

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC---GDLDGAIRVFEKMGER 331
           S C   G L  G+ +H+  ++   + ++    +L+DMY+KC   G +D + +VFE+M E 
Sbjct: 257 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 316

Query: 332 SVVSWTSMIAGYAREGVFDG-AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +V+SWT++I  Y + G  D  AI LF  M+   I P+ ++ +S+L AC        G+ V
Sbjct: 317 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 376

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAM 450
           + Y  +  + S   V N+L+ MYA+ G M DA   F+ +  K++VS+N ++   D +   
Sbjct: 377 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIV---DGYAKN 433

Query: 451 LQNFEP--------------DGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
           L++ E                  T A +L   AS+ A+ +G +IHG +L+ G  +++ + 
Sbjct: 434 LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCIC 493

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           NA++ MY +CG +  A  +F+ +  +++ISWT MI G+  HGF   A+  F+ M + G +
Sbjct: 494 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 553

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           P+E+++++VL ACSH G++ EG + FN M  E  I P++EHYACMVDLL R+G L EA  
Sbjct: 554 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 613

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
           FI  MP+  DA +W +LL  CR+H   +L    AE + E EPD+   Y+LL+N++A A +
Sbjct: 614 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 673

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           W++V K+R+ +  R L K  GCSWIE++ +V+ F  G +SHP A +I   L +L  ++K 
Sbjct: 674 WKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKE 733

Query: 737 EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
            GY P T + L + +E +KE  L  HSEK+A+AFG+++    + IR+ KNLRVCGDCH  
Sbjct: 734 MGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTA 793

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            K++S    REIV+RDSNRFHH K+G CSC  +W
Sbjct: 794 IKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 211/414 (50%), Gaps = 41/414 (9%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I RF ++G    A+++    E S    D  TY S+L  C +L  L  GK++HS +   G+
Sbjct: 221 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 280

Query: 128 VIDDGVLGSKLVFMFVTC---GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF-KESL 183
            +D  V G  LV M+  C   G + + R+VF ++    V  W  ++  Y ++G   KE++
Sbjct: 281 ALDVCV-GCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAI 339

Query: 184 YLFKKMQSLGIAADSYTFSCVLKC------------------------LAVVGNSR---- 215
            LF KM S  I  + ++FS VLK                         +  VGNS     
Sbjct: 340 ELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMY 399

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
               R++DA K FD L ++++VS+N ++ GY  N  +E+   +F E+ + G  +   T  
Sbjct: 400 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 459

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++LSG A+ GA+  G  +H   LK  +       N L+ MYS+CG+++ A +VF +M +R
Sbjct: 460 SLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 519

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KDV 390
           +V+SWTSMI G+A+ G    A+ +F  M+  G +P+     ++L AC+  G++  G K  
Sbjct: 520 NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHF 579

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
           +   KE+ +   +     ++D+  + G + +A    N MP+  D + W T++GA
Sbjct: 580 NSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 633


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 275/738 (37%), Positives = 415/738 (56%), Gaps = 47/738 (6%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           ++  +V  G L E R +F+         W+ ++  Y K G   E+  LF+ M+  G  A 
Sbjct: 102 MISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKAS 161

Query: 198 SYTFSCVLKCLAVVG--------------------------------NSRRVKDAHKLFD 225
            +T   VL+  + +G                                  + V +A  LF 
Sbjct: 162 QFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFK 221

Query: 226 --ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
             E   ++ V W  M++GY  NG   K +E F+ M   G   +  T  T+L+ C++  A 
Sbjct: 222 GLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLAR 281

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
            FG  VH F +K+ F   +   + L+DMY+KCGDL  A  + E M +  VVSW S++ G+
Sbjct: 282 CFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGF 341

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
            R G+ + A+RLF+ M    ++ D Y   S+L+ C    +    K VH  I +   ++  
Sbjct: 342 VRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINP--KSVHGLIIKTGFENYK 399

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQ 452
            VSNAL+DMYAK G M  A +VF +M  KD++SW +++           +L +F  M + 
Sbjct: 400 LVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVT 459

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
              PD   +A IL ACA L  LE G+++H   ++ G+   ++V N++V MY KCG L  A
Sbjct: 460 GVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDA 519

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
            ++F  +  KD+I+WT +I GY  +G G +++  ++ M  +G  PD ++FI +L+ACSH+
Sbjct: 520 DAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHA 579

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           GLVDEG ++F  M     I+P  EHYACM+DL  R+G L EA + ++ M V PDAT+W S
Sbjct: 580 GLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKS 639

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           LL  CR+H  ++LAE+ A ++FELEP N   YV+L+N+Y+ + KW +V K+R+ +  +G+
Sbjct: 640 LLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGI 699

Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 752
            K PGCSW+EI  +VN F++    HP   +I + +  + L +K  GY P   ++L + D+
Sbjct: 700 VKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDK 759

Query: 753 MEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRD 812
             KEV L  HSEKLA+AFG+L  P    IR+ KNLRVCGDCH   K++S+   R I+LRD
Sbjct: 760 EGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRD 819

Query: 813 SNRFHHFKDGRCSCRGFW 830
           SN FHHF++G CSC  +W
Sbjct: 820 SNCFHHFREGECSCGDYW 837



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 262/515 (50%), Gaps = 54/515 (10%)

Query: 73  FCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           +C+ G   +A ++  S   E  K    T  S+L++C+ L  ++ G+ +H  + ++G   +
Sbjct: 137 YCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGN 196

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFN--KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
             V+ + LV M+  C  + E   +F   + D     +W  ++  Y++ G+  +++  F+ 
Sbjct: 197 VFVV-TGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRY 255

Query: 189 MQSLGIAADSYTFSCVLKCLAVV------------------GNSRRV------------- 217
           M + G+  + YTF  +L   + V                  G++  V             
Sbjct: 256 MHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGD 315

Query: 218 -KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
            K+A  + + + D DVVSWN ++ G++ +G+ E+ L +FK M      +D  T  +VL+ 
Sbjct: 316 LKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNC 375

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C   G++   ++VH   +K  F      +N L+DMY+K GD+D A  VFEKM E+ V+SW
Sbjct: 376 CV-VGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISW 433

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH-DYIK 395
           TS++ GYA+    + ++++F  M   G+ PD + + SIL ACA   LLE GK VH D+IK
Sbjct: 434 TSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIK 493

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALD 445
              ++ S  V N+L+ MYAKCG + DA+++F  M VKD+++W  +I           +L 
Sbjct: 494 SG-LRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLK 552

Query: 446 LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMY 503
            + AM+ +   PD +T   +L AC+    ++ GR+    + + +GI         ++D++
Sbjct: 553 FYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLF 612

Query: 504 VKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
            + G L  A+ L D +  K D   W  +++   +H
Sbjct: 613 GRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVH 647



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 255/487 (52%), Gaps = 24/487 (4%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           ++  N L+++ SK+G   ++  LF KM       D Y+++ ++     VG   R+ +A +
Sbjct: 65  IYQTNQLLNQLSKSGQVNDARKLFDKMPQ----KDEYSWNTMISSYVNVG---RLVEARE 117

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           LFD  S +  ++W+ +ISGY   G   +  ++F+ M   G+     T+ +VL  C++ G 
Sbjct: 118 LFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGL 177

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE--KMGERSVVSWTSMI 340
           +  G  +H F +K  F   +     L+DMY+KC  +  A  +F+  +   ++ V WT+M+
Sbjct: 178 IQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMV 237

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
            GYA+ G    A+  FR M  +G+E + Y   +IL AC+       G+ VH +I ++   
Sbjct: 238 TGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFG 297

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT-MIG---------ALDLFVAM 450
           S++YV +AL+DMYAKCG + +A+++   M   D+VSWN+ M+G         AL LF  M
Sbjct: 298 SNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNM 357

Query: 451 L-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
             +N + D  T   +L  C  +      + +HG I++ G    + V+NA+VDMY K G +
Sbjct: 358 HGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDM 415

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             A ++F+ +  KD+ISWT ++ GY  +    +++  F DMR  G+ PD+    S+L AC
Sbjct: 416 DCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSAC 475

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           +   L++ G +  ++   +  +      Y  +V + ++ G L +A      M V  D   
Sbjct: 476 AELTLLEFG-KQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV-KDVIT 533

Query: 630 WGSLLCG 636
           W +++ G
Sbjct: 534 WTAIIVG 540



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 206/413 (49%), Gaps = 37/413 (8%)

Query: 66  YNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           + A +  + + G+  KA+E      ++  + +  T+ +IL  C+ + +   G++VH  I 
Sbjct: 233 WTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIV 292

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +SG    +  + S LV M+  CGDLK  + +   +++  V  WN LM  + + G  +E+L
Sbjct: 293 KSGFG-SNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEAL 351

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVG-----------------NSRRVKD------- 219
            LFK M    +  D YTF  VL C  VVG                 N + V +       
Sbjct: 352 RLFKNMHGRNMKIDDYTFPSVLNC-CVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYA 410

Query: 220 -------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
                  A+ +F+++ ++DV+SW  +++GY  N   E+ L++F +M   G N D   + +
Sbjct: 411 KTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVAS 470

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +LS CA    L FG+ VH   +K+      S  N+L+ MY+KCG LD A  +F  M  + 
Sbjct: 471 ILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKD 530

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           V++WT++I GYA+ G    +++ +  MV  G  PD      +L AC+  GL++ G+    
Sbjct: 531 VITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQ 590

Query: 393 YI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            + K   ++        ++D++ + G + +A+ + +QM VK D   W +++ A
Sbjct: 591 QMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSA 643



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 68/294 (23%)

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------------------- 442
           S+Y +N L++  +K G + DA  +F++MP KD  SWNTMI                    
Sbjct: 64  SIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCS 123

Query: 443 ----------------------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGRE 479
                                 A DLF +M L+ ++    T+  +L  C+SL  ++ G  
Sbjct: 124 CKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEM 183

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP--AKDLISWTIMIAGYGMH 537
           IHG+++++G   +  V   +VDMY KC  +  A  LF  +    K+ + WT M+ GY  +
Sbjct: 184 IHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQN 243

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACS-----------HSGLVDEGWRFFNMMR 586
           G G  A+  F  M   G+E ++ +F ++L ACS           H  +V  G        
Sbjct: 244 GDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG-------- 295

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           +  N+  +    + +VD+ ++ G+L  A   +E M    D   W SL+ G   H
Sbjct: 296 FGSNVYVQ----SALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLMVGFVRH 344


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 282/753 (37%), Positives = 419/753 (55%), Gaps = 60/753 (7%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           +++  IL+ C   K L  GK +H+I  +S ++     L +  + ++  C  L      FN
Sbjct: 9   QSFRQILKSCIANKDLLTGKSLHTIYLKS-LIPSSTYLSNHFILLYSKCNLLTTAHHAFN 67

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           +     VF +N L+  Y+K     ESL                                 
Sbjct: 68  QTHEPNVFSFNALIAAYAK-----ESL--------------------------------- 89

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           +  AH LFD++   D+VS+N +I+ Y   G     L +F EM  +G  +D  T   V++ 
Sbjct: 90  IHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITA 149

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE--RSVV 334
           C N   L+  R +H+ A  + F   +S  N+LL  YSK G L+ A  VF  MGE  R  V
Sbjct: 150 CCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEV 207

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW SMI  Y +      A+ L+R MV  G E D++ + S+L   +C   L  G   H   
Sbjct: 208 SWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKA 267

Query: 395 KENDMQSSLYVSNALMDMYAKCGS-MADAESVFNQMPVKDIVSWNTMIG----------- 442
            +     + +V + L+DMYAKCG+ M+++  VF ++   D+V WNTMI            
Sbjct: 268 IKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVE 327

Query: 443 ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR-NVANAIV 500
           AL+ F  M +  + PD  +  C + AC++L++  +G++ H   ++  I +++ +V NA+V
Sbjct: 328 ALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALV 387

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
            MY KCG L  AR LF  +P  + ++   +IAGY  HG G +++  F  M  A I P  +
Sbjct: 388 TMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSI 447

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           + +S+L AC+H+G V+EG ++FNMM+    IEP+ EHY+CM+DLL R G LSEA R I+ 
Sbjct: 448 TLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDT 507

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP +P +  W +LL  CR +  ++LAEK A    +LEP N   Y++LA++Y+ A KWEE 
Sbjct: 508 MPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEA 567

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            ++R+ +  RG++K PGCSWIE+  +V++FVA  +SHP  K+I   L  + ++MKR GY 
Sbjct: 568 ARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYV 627

Query: 741 PKTRYALINAD---EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           P  R+A +  D   E EKE+ L  HSEKLA+AFG+L    G+ + V KNLR+CGDCH   
Sbjct: 628 PDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCHNAI 687

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KFMS  ARR+I +RD+ RFH F+DGRCSC  +W
Sbjct: 688 KFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 40/293 (13%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG-DLKEG 151
           +ID  T  S+L   + ++ L  G + H+   ++G   +  V GS L+ M+  CG  + E 
Sbjct: 238 EIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHV-GSGLIDMYAKCGAGMSES 296

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFK-ESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
           R+VF +I    + +WN ++  YS+      E+L  F++MQ  G   D  +F C +   + 
Sbjct: 297 RKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSN 356

Query: 211 VGNSRR---------------------------------VKDAHKLFDELSDRDVVSWNC 237
           + +  +                                 ++DA KLF  +   + V+ N 
Sbjct: 357 LSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNS 416

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I+GY  +G+  + L +F++ML         T+V++LS CA+ G +  G+      +K  
Sbjct: 417 IIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNM-MKDI 475

Query: 298 F--SKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREG 347
           F    E    + ++D+  + G L  A R+ + M       +W +++    + G
Sbjct: 476 FGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYG 528



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 125/295 (42%), Gaps = 28/295 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  ++   +  C++L S   GK+ H++  +S I  +   + + LV M+  CG+L++ R++
Sbjct: 343 DDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKL 402

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F ++        N ++  Y++ G   ESL LF++M +  IA  S T   +L   A  G  
Sbjct: 403 FQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTG-- 460

Query: 215 RRVKDAHKLFDELSD-----RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
            RV++  K F+ + D      +   ++CMI      G A K  E  + +  + F+   A 
Sbjct: 461 -RVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLL---GRAGKLSEAERLIDTMPFSPGSAA 516

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
              +L  C   G +          L+   +  + +   L  MYS     + A R+ + M 
Sbjct: 517 WAALLGACRKYGNMELAEKAANQFLQLEPTNAVPY-IMLASMYSAARKWEEAARIRKLMR 575

Query: 330 ERSV-----VSWTSM---IAGYAREGVFDGAIR--------LFRGMVREGIEPDV 368
           +R +      SW  +   +  +  E      I+        +F  M R G  PDV
Sbjct: 576 DRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPDV 630


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 254/624 (40%), Positives = 383/624 (61%), Gaps = 13/624 (2%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCA 278
           A+ +F    + DV++WN M+  ++ + +  + L+ + EML    NV D  T  ++L GCA
Sbjct: 31  AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
                  G+ +H   +K     ++    TLL+MY+ CGDL  A  +FE+MG R+ V WTS
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           MI+GY +    + A+ L++ M  +G  PD   + +++ ACA    L +G  +H +I+E D
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLF- 447
           M+    + +AL++MYAKCG +  A  VF+++  KD+ +W+ +I           AL LF 
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270

Query: 448 -VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
            VA   N  P+ VT+  ++ ACA L  LE GR +H YI R       ++ N+++DM+ KC
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G +  A+ +FD +  KDLISW  M+ G+ +HG G +A+A F  M+   ++PDE++FI VL
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVL 390

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            ACSH+GLV EG + F  +     +  K EHY CMVDLL R G L+EA  FI +MP+ PD
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
             IWGS+L  CR+++ ++L E+ A  + +LEP N G Y+LL+N+YA+ + W EVKK+RE 
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVREL 510

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           ++ +G++K PGCS + I    + F+AG  SHP   +I  +L+++R ++K  GY   T   
Sbjct: 511 MNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEV 570

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
           L+N D+ +KE ++  HSEKLA+ +G+L    G  I + KNLRVC DCH + K +SK  +R
Sbjct: 571 LLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQR 630

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           +I LRD NRFHHFKDG CSCR +W
Sbjct: 631 QITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 229/463 (49%), Gaps = 45/463 (9%)

Query: 26  FASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEV 85
           F  +KPS   +I    S  S  +    +  + T       +N+ +  F       +A++ 
Sbjct: 6   FIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQS 65

Query: 86  ---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
              +    ++  D  T+ S+L+ CA L   + GK +H  + +  ++  D  + + L+ M+
Sbjct: 66  YTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKY-MLHSDLYIETTLLNMY 124

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
             CGDLK  R +F ++ +    +W  ++  Y K     E+L L+KKM+  G + D  T +
Sbjct: 125 AACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMA 184

Query: 203 CV------------------------LKCLAVVGNSR--------RVKDAHKLFDELSDR 230
            +                        +K  AV+G++          +K A ++FD+LSD+
Sbjct: 185 TLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDK 244

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRA 288
           DV +W+ +I GY+ N  + + L++F+E+   G N+  +  T++ V+S CA  G L  GR 
Sbjct: 245 DVYAWSALIFGYVKNNRSTEALQLFREVAG-GSNMRPNEVTILAVISACAQLGDLETGRW 303

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VH +  +      +S NN+L+DM+SKCGD+D A R+F+ M  + ++SW SM+ G+A  G+
Sbjct: 304 VHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGL 363

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE---NDMQSSLYV 405
              A+  FR M    ++PD      +L AC+  GL++ GK +   I+      ++S  Y 
Sbjct: 364 GREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHY- 422

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLF 447
              ++D+  + G +A+A      MP++ D   W +M+GA  ++
Sbjct: 423 -GCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVY 464



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 191/369 (51%), Gaps = 17/369 (4%)

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
           FK    L  ++    + +D Y  + +L   A  G+   +K A  LF+ +  R+ V W  M
Sbjct: 95  FKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGD---LKSARFLFERMGHRNKVVWTSM 151

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           ISGY+ N    + L ++K+M   GF+ D  TM T++S CA    L  G  +H+   +   
Sbjct: 152 ISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDM 211

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
                  + L++MY+KCGDL  A +VF+K+ ++ V +W+++I GY +      A++LFR 
Sbjct: 212 KICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFRE 271

Query: 359 MV-REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
           +     + P+   I +++ ACA  G LE G+ VHDYI       S+ ++N+L+DM++KCG
Sbjct: 272 VAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCG 331

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILP 466
            +  A+ +F+ M  KD++SWN+M+           AL  F  M   + +PD +T   +L 
Sbjct: 332 DIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLT 391

Query: 467 ACASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DL 524
           AC+    ++ G+++   I   +G+         +VD+  + G+L  AR    ++P + D 
Sbjct: 392 ACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDG 451

Query: 525 ISWTIMIAG 533
             W  M+  
Sbjct: 452 AIWGSMLGA 460


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 278/811 (34%), Positives = 454/811 (55%), Gaps = 59/811 (7%)

Query: 75  EVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG 132
           +VG L  A   L   + + +  D  TY  +L+ C   ++ + GK VH  + +SG+ +D  
Sbjct: 3   DVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSV 62

Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI-WNLLMHEYSKTGNFKESLYLFKKMQS 191
           VL + L+ ++  CGD +  R +F  + N +  + W+ ++  ++      ++++ F  M  
Sbjct: 63  VLNT-LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE 121

Query: 192 LGIAADSYTFSCVLKCLA----------------------------------VVGNSRRV 217
           LG   + Y F+ V++  +                                   V  S  +
Sbjct: 122 LGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDL 181

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
             A+K+FD++ +R++V+W  MI+ +   G A   +++F +M   G+  D  T  +VLS C
Sbjct: 182 GSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 241

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC---GDLDGAIRVFEKMGERSVV 334
              G L  G+ +H+  ++   + ++    +L+DMY+KC   G +D + +VFE+M E +V+
Sbjct: 242 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 301

Query: 335 SWTSMIAGYAREGVFDG-AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           SWT++I  Y + G  D  AI LF  M+   I P+ ++ +S+L AC        G+ V+ Y
Sbjct: 302 SWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 361

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQN 453
             +  + S   V N+L+ MYA+ G M DA   F+ +  K++VS+N ++   D +   L++
Sbjct: 362 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIV---DGYAKNLKS 418

Query: 454 FEP--------------DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
            E                  T A +L   AS+ A+ +G +IHG +L+ G  +++ + NA+
Sbjct: 419 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 478

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + MY +CG +  A  +F+ +  +++ISWT MI G+  HGF   A+  F+ M + G +P+E
Sbjct: 479 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 538

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           +++++VL ACSH G++ EG + FN M  E  I P++EHYACMVDLL R+G L EA  FI 
Sbjct: 539 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 598

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP+  DA +W +LL  CR+H   +L    AE + E EPD+   Y+LL+N++A A +W++
Sbjct: 599 SMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKD 658

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V K+R+ +  R L K  GCSWIE++ +V+ F  G +SHP A +I   L +L  ++K  GY
Sbjct: 659 VVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGY 718

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P T + L + +E +KE  L  HSEK+A+AFG+++    + IR+ KNLRVCGDCH   K+
Sbjct: 719 IPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKY 778

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +S    REIV+RDSNRFHH K+G CSC  +W
Sbjct: 779 ISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 211/414 (50%), Gaps = 41/414 (9%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I RF ++G    A+++    E S    D  TY S+L  C +L  L  GK++HS +   G+
Sbjct: 203 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 262

Query: 128 VIDDGVLGSKLVFMFVTC---GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF-KESL 183
            +D  V G  LV M+  C   G + + R+VF ++    V  W  ++  Y ++G   KE++
Sbjct: 263 ALDVCV-GCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAI 321

Query: 184 YLFKKMQSLGIAADSYTFSCVLKC------------------------LAVVGNSR---- 215
            LF KM S  I  + ++FS VLK                         +  VGNS     
Sbjct: 322 ELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMY 381

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
               R++DA K FD L ++++VS+N ++ GY  N  +E+   +F E+ + G  +   T  
Sbjct: 382 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 441

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++LSG A+ GA+  G  +H   LK  +       N L+ MYS+CG+++ A +VF +M +R
Sbjct: 442 SLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 501

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KDV 390
           +V+SWTSMI G+A+ G    A+ +F  M+  G +P+     ++L AC+  G++  G K  
Sbjct: 502 NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHF 561

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
           +   KE+ +   +     ++D+  + G + +A    N MP+  D + W T++GA
Sbjct: 562 NSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 615


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 269/739 (36%), Positives = 421/739 (56%), Gaps = 52/739 (7%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+  CG + +   VF+ I++     W L++  +++ G+++E+L  +++M   G+  D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 201 F-------------------------SCVLKCLAVVGNS--------RRVKDAHKLFDEL 227
           F                         + +L+   ++G +        R ++ A K FDE+
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL---GFNVDLATMVTVLSGCANCGALM 284
             + +V+WN +I+GY  NG     L+++++M++    G   D  T  + L  C+  G + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            GR + A  + + ++ +    N L++MYSKCG L+ A +VF+++  R V++W +MI+GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
           ++G    A+ LF+ M     +P+V     +L AC     LE G+ +H  +KE+  +S L 
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300

Query: 405 VSNALMDMYAKCGS-MADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQ 452
           + N L++MY KC S + +A  VF ++  +D+++WN +I           ALD+F  M L+
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
           N  P+ +T++ +L ACA L A  +G+ +H  I      AD  + N++++MY +CG L   
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +F  I  K L+SW+ +IA Y  HG     +  F ++ Q G+  D+V+ +S L ACSH 
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           G++ EG + F  M  +  + P   H+ CMVDLLSR G L  A   I  MP  PDA  W S
Sbjct: 481 GMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTS 540

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEP-DNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           LL GC++H++ K A +VA+ +FELE  D      LL+NVYAEA +W++V+K R   +RR 
Sbjct: 541 LLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRA 597

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
            +KNPGCS+IEI   V+ FVAG  SHP  + I + +KRL  +MK  GY P  R  L N  
Sbjct: 598 ARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVK 657

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           E EKE  LC HSEKLA+A+G+++ P G  + + KNLR C DCH  AKF+S+   R+IV+R
Sbjct: 658 EEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVR 717

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           DS RFHHF++G CSC+ +W
Sbjct: 718 DSTRFHHFENGSCSCKDYW 736



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 149/497 (29%), Positives = 252/497 (50%), Gaps = 49/497 (9%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E  + D   +   + +C+  K L+ G+ +H++I E+ ++  D +LG+ L+ M+  C DL+
Sbjct: 52  EGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLE 111

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL---GIAADSYTFSCVLK 206
             R+ F+++    +  WN L+  YS+ G+ + +L +++ M S    G+  D+ TFS  L 
Sbjct: 112 LARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALY 171

Query: 207 CLAVVGN--------SRRV------------------------KDAHKLFDELSDRDVVS 234
             +VVG+        +R V                        + A K+FD L +RDV++
Sbjct: 172 ACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIA 231

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           WN MISGY   G A + LE+F+ M       ++ T + +L+ C N   L  GRA+H    
Sbjct: 232 WNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVK 291

Query: 295 KACFSKEISFNNTLLDMYSKC-GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           +  +  ++   N LL+MY+KC   L+ A +VFE++  R V++W  +I  Y + G    A+
Sbjct: 292 EHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDAL 351

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
            +F+ M  E + P+   ++++L ACA  G    GK VH  I     ++ + + N+LM+MY
Sbjct: 352 DIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMY 411

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMA 462
            +CGS+ D   VF  +  K +VSW+T+I A          L+ F  +LQ     D VTM 
Sbjct: 412 NRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMV 471

Query: 463 CILPACASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF-DMIP 520
             L AC+    L+ G +     +  HG++ D      +VD+  + G L  A +L  DM  
Sbjct: 472 STLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPF 531

Query: 521 AKDLISWTIMIAGYGMH 537
             D ++WT +++G  +H
Sbjct: 532 LPDAVAWTSLLSGCKLH 548



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 212/434 (48%), Gaps = 53/434 (12%)

Query: 57  KTLVCKTKNYNAEIGRFCEVGNLEKAMEVLY-----SSEKSKIDTKTYCSILQLCADLKS 111
           KTLV     +NA I  +   G+   A+++       S E  K D  T+ S L  C+ +  
Sbjct: 123 KTLV----TWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGD 178

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           +  G+++ +    SG    D ++ + L+ M+  CG L+  R+VF+++ N  V  WN ++ 
Sbjct: 179 ISQGREIEARTVASGYA-SDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMIS 237

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA---------------------- 209
            Y+K G   ++L LF++M       +  TF  +L                          
Sbjct: 238 GYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYES 297

Query: 210 --VVGN---------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
             V+GN         S  +++A ++F+ L  RDV++WN +I  Y+  G A+  L++FK+M
Sbjct: 298 DLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQM 357

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
                  +  T+  VLS CA  GA   G+AVHA         ++   N+L++MY++CG L
Sbjct: 358 QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSL 417

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
           D  + VF  + ++S+VSW+++IA YA+ G     +  F  +++EG+  D   + S L AC
Sbjct: 418 DDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSAC 477

Query: 379 ACDGLLEIGKD-----VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VK 432
           +  G+L+ G       V D+    D +  L     ++D+ ++ G +  AE++ + MP + 
Sbjct: 478 SHGGMLKEGVQSFLSMVGDHGLAPDYRHFL----CMVDLLSRAGRLEAAENLIHDMPFLP 533

Query: 433 DIVSWNTMIGALDL 446
           D V+W +++    L
Sbjct: 534 DAVAWTSLLSGCKL 547


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 262/620 (42%), Positives = 380/620 (61%), Gaps = 20/620 (3%)

Query: 231  DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
            +V SWN +I+     G + + L  F  +  LG     ++    +  C+    L+ GR  H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038

Query: 291  AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
              A    F  ++  ++ L+DMYSKCG L  A  +F+++  R+VVSWTSMI GY +    D
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098

Query: 351  GAIRLFRGMVREGIE-------P-DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
             A+ LF+  + E  E       P D   + S+L AC+      I + VH ++ +     S
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 2158

Query: 403  LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ 452
            + V N LMD YAKCG    ++ VF+ M  KD +SWN+MI           AL++F  M++
Sbjct: 2159 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 2218

Query: 453  NF--EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
            +     + VT++ +L ACA   AL  G+ IH  +++  +  +  V  +I+DMY KCG + 
Sbjct: 2219 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVE 2278

Query: 511  LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            +A+  FD +  K++ SWT M+AGYGMHG   +A+  F  M +AG++P+ ++F+SVL ACS
Sbjct: 2279 MAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 2338

Query: 571  HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
            H+GLV+EGW +FN M+++ +IEP +EHY CMVDL  R G L+EAY  I+ M + PD  +W
Sbjct: 2339 HAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVW 2398

Query: 631  GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
            GSLL  CRIH  V L E  A+ +FEL+PDN GYYVLL+N+YA+A +W +V+++R  +  R
Sbjct: 2399 GSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNR 2458

Query: 691  GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
             L K PG S +E+KG+V++F+ G   HPH + I   L++L LE+++ GY P     L + 
Sbjct: 2459 QLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDV 2518

Query: 751  DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
            DE EKE+ L  HSEKLA+AFG++N   G TI + KNLRVCGDCH + K +SK   R+ V+
Sbjct: 2519 DEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVV 2578

Query: 811  RDSNRFHHFKDGRCSCRGFW 830
            RDS RFHHFKDG CSC  +W
Sbjct: 2579 RDSKRFHHFKDGVCSCGDYW 2598



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 190/395 (48%), Gaps = 45/395 (11%)

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
           N+     + +L  C N   L   R +HA  +++  S +      L+ +YS  G +  AI 
Sbjct: 24  NIRAKKALFLLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAIL 80

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           +F ++      +W  +I      G+ + A+ L++ MV +GI  D +    ++ AC     
Sbjct: 81  LFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLS 140

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG-------------------------- 417
           +++GK VH  + +      ++V N L+D Y KCG                          
Sbjct: 141 IDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISG 200

Query: 418 -----SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTM 461
                 + +A  +F+++P K++VSW  MI           AL+LF  M  +N  P+  TM
Sbjct: 201 LISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTM 260

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
             ++ AC  +  L  GR IH Y +++ I     +  A++DMY KCG +  A  +F+ +P 
Sbjct: 261 VSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR 320

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           K L +W  MI   G+HG G +A+  F++M +  ++PD ++FI VL AC H   V EG  +
Sbjct: 321 KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAY 380

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           F  M     I P  EHY CM +L +R+ NL EA++
Sbjct: 381 FTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 213/441 (48%), Gaps = 62/441 (14%)

Query: 155  FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-----CLA 209
            +  +D   V  WN ++ + ++ G+  E+L  F  ++ LG+     +F C +K     C  
Sbjct: 1972 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 2031

Query: 210  VVGNSR---------------------------RVKDAHKLFDELSDRDVVSWNCMISGY 242
            V G                              ++KDA  LFDE+  R+VVSW  MI+GY
Sbjct: 2032 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 2091

Query: 243  IANGVAEKGLEVFKEMLNL------GFNV--DLATMVTVLSGCANCGALMFGRAVHAFAL 294
            + N  A+  L +FK+ L        G NV  D   MV+VLS C+          VH F +
Sbjct: 2092 VQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV 2151

Query: 295  KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
            K  F   I   NTL+D Y+KCG    + +VF+ M E+  +SW SMIA YA+ G+   A+ 
Sbjct: 2152 KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALE 2211

Query: 355  LFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
            +F GMVR  G+  +   ++++L ACA  G L  GK +HD + + D++ ++ V  +++DMY
Sbjct: 2212 VFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMY 2271

Query: 414  AKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMA 462
             KCG +  A+  F++M  K++ SW  M+           ALD+F  M++   +P+ +T  
Sbjct: 2272 CKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFV 2331

Query: 463  CILPACASLAALERGREI-----HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
             +L AC+    +E G        H Y +  GI         +VD++ + G L  A +L  
Sbjct: 2332 SVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNEAYNLIK 2387

Query: 518  MIPAK-DLISWTIMIAGYGMH 537
             +  K D + W  ++    +H
Sbjct: 2388 RMKMKPDFVVWGSLLGACRIH 2408



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 181/375 (48%), Gaps = 46/375 (12%)

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNC 237
           NFK    +  K+   G++ D      ++   +  G   R+  A  LF ++ +    +WN 
Sbjct: 39  NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHG---RIAYAILLFYQIQNPCTFTWNL 95

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I     NG++E+ L ++K M+  G   D  T   V+  C N  ++  G+ VH   +K  
Sbjct: 96  IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS------------------- 338
           FS ++   N L+D Y KCG    A++VFEKM  R+VVSWT+                   
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215

Query: 339 ------------MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
                       MI GY R    + A+ LF+ M  E I P+ Y + S++ AC   G+L +
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
           G+ +HDY  +N ++  +Y+  AL+DMY+KCGS+ DA  VF  MP K + +WN+MI     
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335

Query: 443 ------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRN 494
                 AL+LF  M + N +PD +T   +L AC  +  ++ G      + +H GI+    
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395

Query: 495 VANAIVDMYVKCGVL 509
               + ++Y +   L
Sbjct: 396 HYECMTELYARSNNL 410



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 185/375 (49%), Gaps = 32/375 (8%)

Query: 297  CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV-SWTSMIAGYAREGVFDGAIRL 355
            CF   I++N+ L  + S   D       F K  ++S V SW S+IA  AR G    A+R 
Sbjct: 1944 CFDG-ITYNSILFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRA 2002

Query: 356  FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
            F  + + G+ P   +    + +C+    L  G+  H        ++ L+VS+AL+DMY+K
Sbjct: 2003 FSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSK 2062

Query: 416  CGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ---------NFEP 456
            CG + DA ++F+++P++++VSW +MI           AL LF   L+         N   
Sbjct: 2063 CGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPL 2122

Query: 457  DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
            D V M  +L AC+ ++       +HG++++ G      V N ++D Y KCG  ++++ +F
Sbjct: 2123 DSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVF 2182

Query: 517  DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLV 575
            D +  KD ISW  MIA Y   G   +A+  F+ M R  G+  + V+  +VL AC+H+G +
Sbjct: 2183 DWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGAL 2242

Query: 576  DEGWRFFNMMRYECNIEPKLEHYAC----MVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
              G    + +     I+  LE+  C    ++D+  + G +  A +  + M    +   W 
Sbjct: 2243 RAGKCIHDQV-----IKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWT 2296

Query: 632  SLLCGCRIHHEVKLA 646
            +++ G  +H   K A
Sbjct: 2297 AMVAGYGMHGRAKEA 2311



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 202/424 (47%), Gaps = 46/424 (10%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVLYSSEK-SKIDTKT-YCSILQLCADLKSLEDGKKVHSII 122
            ++N+ I      G+  +A+    S  K   I T++ +   ++ C+ L  L  G+  H   
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 2041

Query: 123  CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
               G   D  V  S L+ M+  CG LK+ R +F++I    V  W  ++  Y +      +
Sbjct: 2042 FVFGFETDLFV-SSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNA 2100

Query: 183  LYLFKKM--------QSLGIAADSYTFSCVLK-CLAV---------------------VG 212
            L LFK              +  DS     VL  C  V                     +G
Sbjct: 2101 LLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIG 2160

Query: 213  NSRRVKDAH----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NL 261
                + DA+          K+FD + ++D +SWN MI+ Y  +G++ + LEVF  M+ ++
Sbjct: 2161 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHV 2220

Query: 262  GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
            G   +  T+  VL  CA+ GAL  G+ +H   +K      +    +++DMY KCG ++ A
Sbjct: 2221 GVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMA 2280

Query: 322  IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             + F++M E++V SWT+M+AGY   G    A+ +F  MVR G++P+     S+L AC+  
Sbjct: 2281 KKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHA 2340

Query: 382  GLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNT 439
            GL+E G    + +K   D++  +     ++D++ + G + +A ++  +M +K D V W +
Sbjct: 2341 GLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGS 2400

Query: 440  MIGA 443
            ++GA
Sbjct: 2401 LLGA 2404



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 44/295 (14%)

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
           + +H  I  + + +   ++  L+ +Y+  G +A A  +F Q+      +WN +I      
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 442 ----GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL L+  M+ Q    D  T   ++ AC +  +++ G+ +HG ++++G S D  V 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 497 NAIVDMYVKCGV-------------------------------LVLARSLFDMIPAKDLI 525
           N ++D Y KCG                                L  AR +FD IP+K+++
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           SWT MI GY  +    +A+  F  M+   I P+E + +S++ AC+  G++  G    +  
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
              C IE  +     ++D+ S+ G++ +A    E MP     T W S++    +H
Sbjct: 284 IKNC-IEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT-WNSMITSLGVH 336


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 257/630 (40%), Positives = 382/630 (60%), Gaps = 15/630 (2%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           RV+DA++ FDE+  RDV +WN M+SG   N  A + + +F  M+  G   D  T+ +VL 
Sbjct: 119 RVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLP 178

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C   G      A+H +A+K     E+   N ++D+Y K G L+   +VF+ M  R +V+
Sbjct: 179 MCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVT 238

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W S+I+G+ + G    A+ +F GM   G+ PDV  + S+  A A  G +  G+ VH Y+ 
Sbjct: 239 WNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMV 298

Query: 396 ENDMQ-SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
                   +   NA++DMYAK   +  A+ +F+ MPV+D VSWNT+I           A+
Sbjct: 299 RRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAI 358

Query: 445 DLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
            ++  M ++   +P   T   +LPA + L AL++G  +H   ++ G++ D  V   ++D+
Sbjct: 359 HVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDL 418

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG L  A  LF+  P +    W  +I+G G+HG G  A++ F+ M+Q GI PD V+F
Sbjct: 419 YAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTF 478

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           +S+L ACSH+GLVD+G  FFNMM+    I+P  +HYACMVD+  R G L +A+ FI  MP
Sbjct: 479 VSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMP 538

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + PD+ IWG+LL  CRIH  V++ +  ++++FEL+P N GYYVL++N+YA+  KW+ V +
Sbjct: 539 IKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDE 598

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS--HPHAKKIESLLKRLRLEMKREGYF 740
           +R  + R+ L+K PG S IE+K  VN+F +G     HP  ++I+  L  L  +++  GY 
Sbjct: 599 VRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYV 658

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P   + L + +E EKE  L  HSE+LA+AFGI+N P    + + KNLRVCGDCH   K++
Sbjct: 659 PDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYI 718

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK   REI++RDSNRFHHFKDG CSC  FW
Sbjct: 719 SKITEREIIVRDSNRFHHFKDGYCSCGDFW 748



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 221/469 (47%), Gaps = 47/469 (10%)

Query: 117 KVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
           ++H+     G++  D      LV  ++  G +++  R F+++ +  V  WN ++    + 
Sbjct: 89  QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRN 148

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVL--------KCLA------------------- 209
               E++ LF +M   G+A D+ T S VL        + LA                   
Sbjct: 149 ARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVC 208

Query: 210 -----VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                V G    +++  K+FD +S RD+V+WN +ISG+   G     +E+F  M + G +
Sbjct: 209 NAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVS 268

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFS-KEISFNNTLLDMYSKCGDLDGAIR 323
            D+ T++++ S  A CG +  GR+VH + ++  +   +I   N ++DMY+K   ++ A R
Sbjct: 269 PDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQR 328

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDG 382
           +F+ M  R  VSW ++I GY + G+   AI ++  M + EG++P      S+L A +  G
Sbjct: 329 MFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLG 388

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
            L+ G  +H    +  +   +YV   ++D+YAKCG + +A  +F Q P +    WN +I 
Sbjct: 389 ALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVIS 448

Query: 443 ----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYI-LRHGIS 490
                     AL LF  M Q    PD VT   +L AC+    +++GR     +   +GI 
Sbjct: 449 GVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIK 508

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
                   +VDM+ + G L  A      +P K D   W  ++    +HG
Sbjct: 509 PIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHG 557



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 202/396 (51%), Gaps = 18/396 (4%)

Query: 289 VHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
           +HA AL+    +  +F +  L+  Y + G +  A R F++M  R V +W +M++G  R  
Sbjct: 90  LHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNA 149

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
               A+ LF  MV EG+  D   ++S+L  C   G   +   +H Y  ++ +   L+V N
Sbjct: 150 RAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCN 209

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEP 456
           A++D+Y K G + +   VF+ M  +D+V+WN++I           A+++F  M  +   P
Sbjct: 210 AMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSP 269

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVA-NAIVDMYVKCGVLVLARSL 515
           D +T+  +  A A    +  GR +H Y++R G      +A NAIVDMY K   +  A+ +
Sbjct: 270 DVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRM 329

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGL 574
           FD +P +D +SW  +I GY  +G   +AI  ++ M +  G++P + +F+SVL A SH G 
Sbjct: 330 FDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGA 389

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           + +G R  + +  +  +   +    C++DL ++ G L EA    E  P       W +++
Sbjct: 390 LQQGTR-MHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGP-WNAVI 447

Query: 635 CGCRIH-HEVKLAEKVAEHVFE-LEPDNTGYYVLLA 668
            G  +H H  K     ++   E + PD+  +  LLA
Sbjct: 448 SGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLA 483



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/417 (21%), Positives = 163/417 (39%), Gaps = 78/417 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N+ I    + G +  A+E+      S +  D  T  S+    A    +  G+ VH  +
Sbjct: 238 TWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYM 297

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G  + D + G+ +V M+     ++  +R+F+ +       WN L+  Y + G   E+
Sbjct: 298 VRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEA 357

Query: 183 LYLFKKMQ------------------------------------SLGIAADSYTFSCVLK 206
           ++++  MQ                                      G+  D Y  +CV+ 
Sbjct: 358 IHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVID 417

Query: 207 CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
             A  G   ++ +A  LF++   R    WN +ISG   +G   K L +F +M   G + D
Sbjct: 418 LYAKCG---KLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPD 474

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             T V++L+ C++ G +  GR               +F N +   Y         I+   
Sbjct: 475 HVTFVSLLAACSHAGLVDQGR---------------NFFNMMQTAY--------GIKPIA 511

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
           K        +  M+  + R G  D A    R M    I+PD     ++L AC   G +E+
Sbjct: 512 K-------HYACMVDMFGRAGQLDDAFDFIRNMP---IKPDSAIWGALLGACRIHGNVEM 561

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCG---SMADAESVFNQMPVKDIVSWNTM 440
           GK     + E D ++  Y    + +MYAK G    + +  S+  +  ++    W+++
Sbjct: 562 GKVASQNLFELDPKNVGYYV-LMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 617


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 269/739 (36%), Positives = 420/739 (56%), Gaps = 52/739 (7%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+  CG + +   VF+ I++     W L++  +++ G+++E+L  +++M   G+  D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 201 F-------------------------SCVLKCLAVVGNS--------RRVKDAHKLFDEL 227
           F                         + +L+   ++G +        R ++ A K FDE+
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL---GFNVDLATMVTVLSGCANCGALM 284
             + +V+WN +I+GY  NG     L+++++M++    G   D  T  + L  C   G + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            GR + A  + + ++ +    N L++MYSKCG L+ A +VF+++  R V++W +MI+GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
           ++G    A+ LF+ M     +P+V     +L AC     LE G+ +H  ++E+  +S L 
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300

Query: 405 VSNALMDMYAKCGS-MADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQ 452
           + N L++MY KC S + +A  VF +M  +D+++WN +I           ALD+F  M L+
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
           N  P+ +T++ +L ACA L A  +G+ +H  I      AD  + N++++MY +CG L   
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +F  I  K L+SW+ +IA Y  HG     +  F ++ Q G+  D+V+ +S L ACSH 
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           G++ EG + F  M  +  + P   H+ CMVDLLSR G L  A   I  MP  PDA  W S
Sbjct: 481 GMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTS 540

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEP-DNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           LL GC++H++ K A +VA+ +FELE  D      LL+NVYAEA +W++V+K R   +RR 
Sbjct: 541 LLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRA 597

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
            +KNPGCS+IEI   V+ FVAG  SHP  + I + +KRL  +MK  GY P  R  L N  
Sbjct: 598 ARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVK 657

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           E EKE  LC HSEKLA+A+G+++ P G  + + KNLR C DCH  AKF+S+   R+IV+R
Sbjct: 658 EEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVR 717

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           DS RFHHF++G CSC+ +W
Sbjct: 718 DSTRFHHFENGSCSCKDYW 736



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 150/497 (30%), Positives = 251/497 (50%), Gaps = 49/497 (9%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E  + D   +   + +C+  K L+ G+ +H++I E+ ++  D +LG+ L+ M+  C DL+
Sbjct: 52  EGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLE 111

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL---GIAADSYTFSCVLK 206
             R+ F+++    +  WN L+  YS+ G+ + +L +++ M S    G+  D+ TFS  L 
Sbjct: 112 LARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALY 171

Query: 207 CLAVVGN--------SRRV------------------------KDAHKLFDELSDRDVVS 234
              VVG+        +R V                        + A K+FD L +RDV++
Sbjct: 172 ACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIA 231

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           WN MISGY   G A + LE+F+ M       ++ T + +L+ C N   L  GRA+H    
Sbjct: 232 WNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVR 291

Query: 295 KACFSKEISFNNTLLDMYSKC-GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           +  +  ++   N LL+MY+KC   L+ A +VFE+M  R V++W  +I  Y + G    A+
Sbjct: 292 EDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDAL 351

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
            +F+ M  E + P+   ++++L ACA  G    GK VH  I     ++ + + N+LM+MY
Sbjct: 352 DIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMY 411

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMA 462
            +CGS+ D   VF  +  K +VSW+T+I A          L+ F  +LQ     D VTM 
Sbjct: 412 NRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMV 471

Query: 463 CILPACASLAALERGREIH-GYILRHGISADRNVANAIVDMYVKCGVLVLARSLF-DMIP 520
             L AC+    L+ G +     +  HG++ D      +VD+  + G L  A +L  DM  
Sbjct: 472 STLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPF 531

Query: 521 AKDLISWTIMIAGYGMH 537
             D ++WT +++G  +H
Sbjct: 532 LPDAVAWTSLLSGCKLH 548



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 211/434 (48%), Gaps = 53/434 (12%)

Query: 57  KTLVCKTKNYNAEIGRFCEVGNLEKAMEVLY-----SSEKSKIDTKTYCSILQLCADLKS 111
           KTLV     +NA I  +   G+   A+++       S E  K D  T+ S L  C  +  
Sbjct: 123 KTLV----TWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGD 178

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           +  G+++ +    SG    D ++ + L+ M+  CG L+  R+VF+++ N  V  WN ++ 
Sbjct: 179 ISQGREIEARTVASGYA-SDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMIS 237

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA---------------------- 209
            Y+K G   ++L LF++M       +  TF  +L                          
Sbjct: 238 GYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYES 297

Query: 210 --VVGN---------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
             V+GN         S  +++A ++F+ +  RDV++WN +I  Y+  G A+  L++FK+M
Sbjct: 298 DLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQM 357

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
                  +  T+  VLS CA  GA   G+AVHA         ++   N+L++MY++CG L
Sbjct: 358 QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSL 417

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
           D  + VF  + ++S+VSW+++IA YA+ G     +  F  +++EG+  D   + S L AC
Sbjct: 418 DDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSAC 477

Query: 379 ACDGLLEIGKD-----VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VK 432
           +  G+L+ G       V D+    D +  L     ++D+ ++ G +  AE++ + MP + 
Sbjct: 478 SHGGMLKEGVQTFLSMVGDHGLAPDYRHFL----CMVDLLSRAGRLEAAENLIHDMPFLP 533

Query: 433 DIVSWNTMIGALDL 446
           D V+W +++    L
Sbjct: 534 DAVAWTSLLSGCKL 547


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 256/624 (41%), Positives = 381/624 (61%), Gaps = 13/624 (2%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCA 278
           A+ +F      DV++WN M+  ++ + +  + L+ + EML    NV D  T  ++L GCA
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
                  G+ +H   +K     ++    TLL+MY+ CGDL  A  +FE+MG R+ V WTS
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           MI+GY +    + A+ L++ M  +G  PD   + +++ ACA    L +G  +H +I+E D
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLF- 447
           M+    + +AL++MYAKCG +  A  VF+Q+  KD+ +W+ +I           AL LF 
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270

Query: 448 -VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
            VA   N  P+ VT+  ++ ACA L  LE GR +H YI R       ++ N+++DM+ KC
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G +  A+ +FD +  KDLISW  M+ G  +HG G +A+A F+ M+   ++PDE++FI VL
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVL 390

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            ACSH+GLV EG + F  +     +  K EHY CMVDLL R G L+EA  FI +MP+ PD
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
             IWGS+L  CR+++ ++L E+ A  + ELEP N G Y+LL+N+YA  + W EVKK+RE 
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVREL 510

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           ++ +G++K PGCS + I    + F+AG  SHP   +I  +L+++R ++K  GY   T   
Sbjct: 511 MNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEV 570

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
           L+N D+ +KE ++  HSEKLA+ +G+L    G  I + KNLRVC DCH + K +SK  +R
Sbjct: 571 LLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQR 630

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           +I LRD NRFHHFKDG CSCR +W
Sbjct: 631 QITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 244/515 (47%), Gaps = 57/515 (11%)

Query: 26  FASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEV 85
           F  +KPS   +I    S  S  +    +  + T V     +N+ +  F       +A++ 
Sbjct: 6   FIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQS 65

Query: 86  ---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
              +    ++  D  T+ S+L+ CA L   + GK +H  + +  ++  D  + + L+ M+
Sbjct: 66  YTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKY-MLHSDLYIETTLLNMY 124

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
             CGDLK  R +F ++ +    +W  ++  Y K     E+L L+KKM+  G + D  T +
Sbjct: 125 AACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMA 184

Query: 203 CV------------------------LKCLAVVGNSR--------RVKDAHKLFDELSDR 230
            +                        +K  AV+G++          +K A ++FD+LSD+
Sbjct: 185 TLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDK 244

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRA 288
           DV +W+ +I GY+ N  + + L++F+E+   G N+  +  T++ V+S CA  G L  GR 
Sbjct: 245 DVYAWSALIFGYVKNNRSTEALQLFREVAG-GSNMRPNEVTILAVISACAQLGDLETGRW 303

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VH +  +      +S NN+L+DM+SKCGD+D A R+F+ M  + ++SW SM+ G A  G+
Sbjct: 304 VHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGL 363

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE---NDMQSSLYV 405
              A+  F  M    ++PD      +L AC+  GL++ GK +   I+      ++S  Y 
Sbjct: 364 GREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHY- 422

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLFVAMLQNFEPDGVTMACI 464
              ++D+  + G +A+A      MP++ D   W +M+GA  ++     N E       C+
Sbjct: 423 -GCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVY----NNLELGEEAARCL 477

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAI 499
           L     L     G     YIL   I A R + N +
Sbjct: 478 L----ELEPTNDGV----YILLSNIYARRKMWNEV 504



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 190/369 (51%), Gaps = 17/369 (4%)

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
           FK    L  ++    + +D Y  + +L   A  G+   +K A  LF+ +  R+ V W  M
Sbjct: 95  FKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGD---LKSARFLFERMGHRNKVVWTSM 151

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           ISGY+ N    + L ++K+M   GF+ D  TM T++S CA    L  G  +H+   +   
Sbjct: 152 ISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDM 211

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
                  + L++MY+KCGDL  A +VF+++ ++ V +W+++I GY +      A++LFR 
Sbjct: 212 KICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFRE 271

Query: 359 MV-REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
           +     + P+   I +++ ACA  G LE G+ VHDYI       S+ ++N+L+DM++KCG
Sbjct: 272 VAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCG 331

Query: 418 SMADAESVFNQMPVKDIVSWNTMIGALDL-----------FVAMLQNFEPDGVTMACILP 466
            +  A+ +F+ M  KD++SWN+M+  L L            +    + +PD +T   +L 
Sbjct: 332 DIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLT 391

Query: 467 ACASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DL 524
           AC+    ++ G+++   I   +G+         +VD+  + G+L  AR    ++P + D 
Sbjct: 392 ACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDG 451

Query: 525 ISWTIMIAG 533
             W  M+  
Sbjct: 452 AIWGSMLGA 460


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 301/806 (37%), Positives = 438/806 (54%), Gaps = 85/806 (10%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D   + ++L+  A ++ L  GK++H+ + + G  +   V  S LV M+  CGD+   RRV
Sbjct: 84  DNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNS-LVNMYGKCGDIDAARRV 142

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKCLAVV-- 211
           F++I N     WN +++   +   ++ +++LF+ M    +   S+T  S    C  ++  
Sbjct: 143 FDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLING 202

Query: 212 --------------GNSR---------------RVKDAHKLFDELSDRDVVSWNCMISGY 242
                         G+ R               RV +A  LFD   D+D+VSWN +IS  
Sbjct: 203 LLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSL 262

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             N   E+ L     ML  G   +  T+ +VL  C++   L  G+ +HAF L      E 
Sbjct: 263 SQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIEN 322

Query: 303 SFNN-TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           SF    L+DMY  C   +    VF+ M  R++  W +MIAGY R      AI LF  MV 
Sbjct: 323 SFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVF 382

Query: 362 E-GIEPDVYAITSILHACA-CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           E G+ P+   ++S+L AC  C+  L+  + +H  + +   +   YV NALMDMY++ G +
Sbjct: 383 ELGLSPNSVTLSSVLPACVRCESFLD-KEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRI 441

Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-----------------Q 452
             A S+F  M  KDIVSWNTMI           AL+L   M                  +
Sbjct: 442 EIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNK 501

Query: 453 NF--EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
           NF  +P+ VT+  +LP CA+LAAL +G+EIH Y ++  +S D  V +A+VDMY KCG L 
Sbjct: 502 NFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLN 561

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-----IEPDEVSFISV 565
           L+R++F+ +  +++I+W ++I  YGMHG G +A+  F  M + G     I P+EV++I++
Sbjct: 562 LSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAI 621

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV-A 624
             + SHSG+VDEG   F  M+ +  IEP  +HYAC+VDLL R+G + EAY  I+ MP   
Sbjct: 622 FASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNM 681

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
                W SLL  C+IH  +++ E  A+++F L+P+   Y               +   L 
Sbjct: 682 KKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVLDYGT-------------KQSMLG 728

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
            K+  +G++K PGCSWIE   +V+ F+AG  SHP +K++   L+ L L MK+EGY P T 
Sbjct: 729 RKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTS 788

Query: 745 YALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTA 804
             L N  E EKE  LCGHSE+LA+AFG+LN   G TIRV KNLRVC DCH   KF+SK  
Sbjct: 789 CVLHNVGEEEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIV 848

Query: 805 RREIVLRDSNRFHHFKDGRCSCRGFW 830
            REI+LRD  RFHHF++G CSC  +W
Sbjct: 849 DREIILRDVRRFHHFRNGTCSCGDYW 874



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/419 (32%), Positives = 211/419 (50%), Gaps = 46/419 (10%)

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
            + +  +  M+  G   D      VL   A    L  G+ +HA   K   +   +  N+L
Sbjct: 67  HQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSL 126

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           ++MY KCGD+D A RVF+++  R  VSW SMI    R   ++ A+ LFR M+ E + P  
Sbjct: 127 VNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTS 186

Query: 369 YAITSILHACA--CDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESV 425
           + + S+ HAC+   +GLL +GK VH ++  N D ++  + +NAL+ MYAK G + +A+++
Sbjct: 187 FTLVSVAHACSNLINGLL-LGKQVHAFVLRNGDWRT--FTNNALVTMYAKLGRVYEAKTL 243

Query: 426 FNQMPVKDIVSWNTMIGALD-----------LFVAMLQNFEPDGVTMACILPACASLAAL 474
           F+    KD+VSWNT+I +L            L V +     P+GVT+A +LPAC+ L  L
Sbjct: 244 FDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEML 303

Query: 475 ERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
             G+EIH ++L  + +  +  V  A+VDMY  C      R +FD +  + +  W  MIAG
Sbjct: 304 GCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAG 363

Query: 534 YGMHGFGCDAIATFNDMR-QAGIEPDEVSFISVLYACS-----------HSGLVDEGWRF 581
           Y  + F  +AI  F +M  + G+ P+ V+  SVL AC            HS +V  G   
Sbjct: 364 YVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWG--- 420

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP----VAPDATIWGSLLCG 636
           F   +Y  N          ++D+ SR G +  A      M     V+ +  I G ++CG
Sbjct: 421 FEKDKYVQN---------ALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCG 470



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 221/452 (48%), Gaps = 65/452 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I    +    E+A+  L+   +S +     T  S+L  C+ L+ L  GK++H+ +
Sbjct: 254 SWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFV 313

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +  +I++  +G  LV M+  C   ++GR VF+ +    + +WN ++  Y +     E+
Sbjct: 314 LMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEA 373

Query: 183 LYLFKKMQ-SLGIAADSYTFSCVL----------------KCLAVVGNSR---------- 215
           + LF +M   LG++ +S T S VL                 C+   G  +          
Sbjct: 374 IELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMD 433

Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML---------- 259
                 R++ A  +F  ++ +D+VSWN MI+GY+  G  +  L +  +M           
Sbjct: 434 MYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINT 493

Query: 260 --------NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
                   N     +  T++TVL GCA   AL  G+ +HA+A+K   SK+++  + L+DM
Sbjct: 494 FDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDM 553

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-----IEP 366
           Y+KCG L+ +  VFE+M  R+V++W  +I  Y   G  + A++LFR MV EG     I P
Sbjct: 554 YAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRP 613

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           +     +I  + +  G+++ G ++   +K ++ ++ +      L+D+  + G + +A ++
Sbjct: 614 NEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNL 673

Query: 426 FNQMP--VKDIVSWNTMIGALDLFVAMLQNFE 455
              MP  +K + +W++++GA  +     QN E
Sbjct: 674 IKTMPSNMKKVDAWSSLLGACKIH----QNLE 701



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 133/249 (53%), Gaps = 14/249 (5%)

Query: 336 WTSMIAGYAREG-VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           W S +    +    F  AI  +  MV  G+ PD +A  ++L A A    L +GK +H ++
Sbjct: 52  WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHV 111

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
            +        V N+L++MY KCG +  A  VF+++  +D VSWN+MI           A+
Sbjct: 112 FKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAV 171

Query: 445 DLF-VAMLQNFEPDGVTMACILPACASLA-ALERGREIHGYILRHGISADRNVANAIVDM 502
            LF + +L+N  P   T+  +  AC++L   L  G+++H ++LR+G        NA+V M
Sbjct: 172 HLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTM 230

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y K G +  A++LFD+   KDL+SW  +I+    +    +A+   + M Q+G+ P+ V+ 
Sbjct: 231 YAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTL 290

Query: 563 ISVLYACSH 571
            SVL ACSH
Sbjct: 291 ASVLPACSH 299


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 269/661 (40%), Positives = 400/661 (60%), Gaps = 26/661 (3%)

Query: 188 KMQSLGIAADSYTFSCV----LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
           ++++ G+A++S   + +     KC       RR  DA ++FD +  RD V+WN +++GY 
Sbjct: 41  QLEARGLASESIASTALANMYFKC-------RRPADARRVFDRMPSRDRVAWNAVVAGYA 93

Query: 244 ANGVAEKGLEVFKEMLNL--GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
            NG+    +E    M     G   D  T+V+VL  CA+  AL   R VHAFAL+A   + 
Sbjct: 94  RNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDEL 153

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           ++ +  +LD Y KCG ++ A  VF+ M  R+ VSW +MI GYA  G    A+ LF  MV+
Sbjct: 154 VNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQ 213

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           EG++    ++ + L AC   G L+  + VH+ +    + S++ V+NAL+  YAKC     
Sbjct: 214 EGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADL 273

Query: 422 AESVFNQMPVKDI-VSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACA 469
           A  VFN++  K   +SWN MI           A  LF  M L+N  PD  T+  ++PA A
Sbjct: 274 AAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVA 333

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            ++   + R IHGY +RH +  D  V  A++DMY KCG + +AR LFD    + +I+W  
Sbjct: 334 DISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNA 393

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           MI GYG HGFG  A+  F +M+  G  P+E +F+SVL ACSH+GLVDEG ++F  M+ + 
Sbjct: 394 MIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDY 453

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            +EP +EHY  MVDLL R G L EA+ FI+ MP+ P  +++G++L  C++H  V+LAE+ 
Sbjct: 454 GLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEES 513

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           A+ +FEL P+   Y+VLLAN+YA A  W++V ++R  + ++GL+K PG S I++K +V+ 
Sbjct: 514 AQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHT 573

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F +G ++H HAK I + L +L  E+K  GY P T       D+++ ++ L  HSEKLA+A
Sbjct: 574 FYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSIHDVEDDVKAQL-LNTHSEKLAIA 632

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           +G++    G TI++ KNLRVC DCH   K +S    REI++RD  RFHHFKDG+CSC  +
Sbjct: 633 YGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDY 692

Query: 830 W 830
           W
Sbjct: 693 W 693



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 220/477 (46%), Gaps = 48/477 (10%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           +T+ ++L+LCA    L  G+ VH+ +   G+   + +  + L  M+  C    + RRVF+
Sbjct: 17  RTFTALLKLCAARADLATGRAVHAQLEARGLA-SESIASTALANMYFKCRRPADARRVFD 75

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL--GIAADSYTFSCVLKCLA----- 209
           ++ +     WN ++  Y++ G    ++    +MQ    G   DS T   VL   A     
Sbjct: 76  RMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARAL 135

Query: 210 -----------------VVGNSRRVKDAH----------KLFDELSDRDVVSWNCMISGY 242
                            +V  S  V DA+           +FD +  R+ VSWN MI GY
Sbjct: 136 HACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGY 195

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             NG A + + +F  M+  G +V  A+++  L  C   G L   R VH   ++   S  +
Sbjct: 196 ADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNV 255

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           S  N L+  Y+KC   D A +VF ++G +++ +SW +MI G+ +    + A RLF  M  
Sbjct: 256 SVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQL 315

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           E + PD + + S++ A A        + +H Y   + +   +YV  AL+DMY+KCG ++ 
Sbjct: 316 ENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSI 375

Query: 422 AESVFNQMPVKDIVSWNTMI---GALDLFVAMLQNFE--------PDGVTMACILPACAS 470
           A  +F+    + +++WN MI   G+     A ++ FE        P+  T   +L AC+ 
Sbjct: 376 ARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSH 435

Query: 471 LAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
              ++ G++    + + +G+         +VD+  + G L  A S    +P +  IS
Sbjct: 436 AGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGIS 492



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 183/370 (49%), Gaps = 21/370 (5%)

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
           L T   +L  CA    L  GRAVHA       + E   +  L +MY KC     A RVF+
Sbjct: 16  LRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFD 75

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE--GIEPDVYAITSILHACACDGLL 384
           +M  R  V+W +++AGYAR G+   A+     M  E  G  PD   + S+L ACA    L
Sbjct: 76  RMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARAL 135

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
              ++VH +     +   + VS A++D Y KCG++  A +VF+ MPV++ VSWN MI   
Sbjct: 136 HACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGY 195

Query: 443 --------ALDLFVAMLQNFEPDGVTMACILP---ACASLAALERGREIHGYILRHGISA 491
                   A+ LF  M+Q  E   VT A +L    AC  L  L+  R +H  ++R G+S+
Sbjct: 196 ADNGNATEAMALFWRMVQ--EGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL-ISWTIMIAGYGMHGFGCDAIATFNDM 550
           + +V NA++  Y KC    LA  +F+ +  K   ISW  MI G+  +    DA   F  M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313

Query: 551 RQAGIEPDEVSFISVLYACSH-SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           +   + PD  + +SV+ A +  S  +   W     +R++  ++  +     ++D+ S+ G
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQ--LDQDVYVLTALIDMYSKCG 371

Query: 610 NLSEAYRFIE 619
            +S A R  +
Sbjct: 372 RVSIARRLFD 381



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 126/234 (53%), Gaps = 15/234 (6%)

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P +   T++L  CA    L  G+ VH  ++   + S    S AL +MY KC   ADA  V
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE----PDGVTMACILPACASL 471
           F++MP +D V+WN ++           A++  V M Q  E    PD VT+  +LPACA  
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRM-QGEEGGERPDSVTLVSVLPACADA 132

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            AL   RE+H + LR G+    NV+ A++D Y KCG +  AR++FD +P ++ +SW  MI
Sbjct: 133 RALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMI 192

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
            GY  +G   +A+A F  M Q G++  + S ++ L AC   G +DE  R   ++
Sbjct: 193 DGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELL 246



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 193/421 (45%), Gaps = 42/421 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKS----KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           +NA +  +   G    AME +   +      + D+ T  S+L  CAD ++L   ++VH+ 
Sbjct: 85  WNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAF 144

Query: 122 ICESGIVIDDGVLGSKLVF-MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              +G+  D+ V  S  V   +  CG ++  R VF+ +       WN ++  Y+  GN  
Sbjct: 145 ALRAGL--DELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNAT 202

Query: 181 ESLYLFKKMQSLGI-AADSYTFSCVLKC--LAVVGNSRRVKD------------------ 219
           E++ LF +M   G+   D+   + +  C  L  +   RRV +                  
Sbjct: 203 EAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALI 262

Query: 220 -----------AHKLFDELSDRDV-VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                      A ++F+EL ++   +SWN MI G+  N   E    +F  M       D 
Sbjct: 263 TTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDS 322

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T+V+V+   A+    +  R +H ++++    +++     L+DMYSKCG +  A R+F+ 
Sbjct: 323 FTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDS 382

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
             +R V++W +MI GY   G    A+ LF  M   G  P+     S+L AC+  GL++ G
Sbjct: 383 ARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEG 442

Query: 388 KDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALD 445
           +     +K++  ++  +     ++D+  + G + +A S    MP++  +S +  M+GA  
Sbjct: 443 QKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACK 502

Query: 446 L 446
           L
Sbjct: 503 L 503



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 5/239 (2%)

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           T   +L  CA+ A L  GR +H  +   G++++   + A+ +MY KC     AR +FD +
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMR--QAGIEPDEVSFISVLYACSHSGLVDE 577
           P++D ++W  ++AGY  +G    A+     M+  + G  PD V+ +SVL AC+ +  +  
Sbjct: 78  PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARAL-H 136

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
             R  +       ++  +     ++D   + G +  A    + MPV  ++  W +++ G 
Sbjct: 137 ACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVR-NSVSWNAMIDGY 195

Query: 638 RIHHEVKLAEKVAEHVFELEPDNTGYYVLLA-NVYAEAEKWEEVKKLREKISRRGLKKN 695
             +     A  +   + +   D T   VL A     E    +EV+++ E + R GL  N
Sbjct: 196 ADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSN 254



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 24/199 (12%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E  + D+ T  S++   AD+      + +H       +  D  VL + L+ M+  CG + 
Sbjct: 316 ENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVL-TALIDMYSKCGRVS 374

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
             RR+F+   +  V  WN ++H Y   G  + ++ LF++M+  G   +  TF   L  LA
Sbjct: 375 IARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTF---LSVLA 431

Query: 210 VVGNSRRVKDAHKLFDELS-----DRDVVSWNCMIS------------GYIANGVAEKGL 252
              ++  V +  K F  +      +  +  +  M+              +I N   E G+
Sbjct: 432 ACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGI 491

Query: 253 EVFKEML---NLGFNVDLA 268
            V+  ML    L  NV+LA
Sbjct: 492 SVYGAMLGACKLHKNVELA 510


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/620 (42%), Positives = 380/620 (61%), Gaps = 20/620 (3%)

Query: 231  DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
            +V SWN +I+     G + + L  F  +  LG     ++    +  C+    L+ GR  H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165

Query: 291  AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
              A    F  ++  ++ L+DMYSKCG L  A  +F+++  R+VVSWTSMI GY +    D
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225

Query: 351  GAIRLFRGMVREGIE-------P-DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
             A+ LF+  + E  E       P D   + S+L AC+      I + VH ++ +     S
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 1285

Query: 403  LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ 452
            + V N LMD YAKCG    ++ VF+ M  KD +SWN+MI           AL++F  M++
Sbjct: 1286 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 1345

Query: 453  NF--EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
            +     + VT++ +L ACA   AL  G+ IH  +++  +  +  V  +I+DMY KCG + 
Sbjct: 1346 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVE 1405

Query: 511  LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            +A+  FD +  K++ SWT M+AGYGMHG   +A+  F  M +AG++P+ ++F+SVL ACS
Sbjct: 1406 MAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 1465

Query: 571  HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
            H+GLV+EGW +FN M+++ +IEP +EHY CMVDL  R G L+EAY  I+ M + PD  +W
Sbjct: 1466 HAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVW 1525

Query: 631  GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
            GSLL  CRIH  V L E  A+ +FEL+PDN GYYVLL+N+YA+A +W +V+++R  +  R
Sbjct: 1526 GSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNR 1585

Query: 691  GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
             L K PG S +E+KG+V++F+ G   HPH + I   L++L LE+++ GY P     L + 
Sbjct: 1586 QLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDV 1645

Query: 751  DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
            DE EKE+ L  HSEKLA+AFG++N   G TI + KNLRVCGDCH + K +SK   R+ V+
Sbjct: 1646 DEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVV 1705

Query: 811  RDSNRFHHFKDGRCSCRGFW 830
            RDS RFHHFKDG CSC  +W
Sbjct: 1706 RDSKRFHHFKDGVCSCGDYW 1725



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 213/441 (48%), Gaps = 62/441 (14%)

Query: 155  FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-----CLA 209
            +  +D   V  WN ++ + ++ G+  E+L  F  ++ LG+     +F C +K     C  
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 1158

Query: 210  VVGNSR---------------------------RVKDAHKLFDELSDRDVVSWNCMISGY 242
            V G                              ++KDA  LFDE+  R+VVSW  MI+GY
Sbjct: 1159 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 1218

Query: 243  IANGVAEKGLEVFKEMLNL------GFNV--DLATMVTVLSGCANCGALMFGRAVHAFAL 294
            + N  A+  L +FK+ L        G NV  D   MV+VLS C+          VH F +
Sbjct: 1219 VQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV 1278

Query: 295  KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
            K  F   I   NTL+D Y+KCG    + +VF+ M E+  +SW SMIA YA+ G+   A+ 
Sbjct: 1279 KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALE 1338

Query: 355  LFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
            +F GMVR  G+  +   ++++L ACA  G L  GK +HD + + D++ ++ V  +++DMY
Sbjct: 1339 VFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMY 1398

Query: 414  AKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMA 462
             KCG +  A+  F++M  K++ SW  M+           ALD+F  M++   +P+ +T  
Sbjct: 1399 CKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFV 1458

Query: 463  CILPACASLAALERGREI-----HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
             +L AC+    +E G        H Y +  GI         +VD++ + G L  A +L  
Sbjct: 1459 SVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNEAYNLIK 1514

Query: 518  MIPAK-DLISWTIMIAGYGMH 537
             +  K D + W  ++    +H
Sbjct: 1515 RMKMKPDFVVWGSLLGACRIH 1535



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 184/380 (48%), Gaps = 42/380 (11%)

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
           NC      R +HA  +++  S +      L+ +YS  G +  AI +F ++      +W  
Sbjct: 36  NCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNL 95

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +I      G+ + A+ L++ MV +GI  D +    ++ AC     +++GK VH  + +  
Sbjct: 96  IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155

Query: 399 MQSSLYVSNALMDMYAKCG-------------------------------SMADAESVFN 427
               ++V N L+D Y KCG                                + +A  +F+
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALER 476
           ++P K++VSW  MI           AL+LF  M  +N  P+  TM  ++ AC  +  L  
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           GR IH Y +++ I     +  A++DMY KCG +  A  +F+ +P K L +W  MI   G+
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG G +A+  F++M +  ++PD ++FI VL AC H   V EG  +F  M     I P  E
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395

Query: 597 HYACMVDLLSRTGNLSEAYR 616
           HY CM +L +R+ NL EA++
Sbjct: 396 HYECMTELYARSNNLDEAFK 415



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 181/375 (48%), Gaps = 46/375 (12%)

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNC 237
           NFK    +  K+   G++ D        K + +     R+  A  LF ++ +    +WN 
Sbjct: 39  NFKHLRQIHAKIIRSGLSNDQL---LTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNL 95

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I     NG++E+ L ++K M+  G   D  T   V+  C N  ++  G+ VH   +K  
Sbjct: 96  IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155

Query: 298 FSKEISFNNTLLDMYSKCG-------------------------------DLDGAIRVFE 326
           FS ++   N L+D Y KCG                               DL  A R+F+
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
           ++  ++VVSWT+MI GY R    + A+ LF+ M  E I P+ Y + S++ AC   G+L +
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
           G+ +HDY  +N ++  +Y+  AL+DMY+KCGS+ DA  VF  MP K + +WN+MI     
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335

Query: 443 ------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRN 494
                 AL+LF  M + N +PD +T   +L AC  +  ++ G      + +H GI+    
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395

Query: 495 VANAIVDMYVKCGVL 509
               + ++Y +   L
Sbjct: 396 HYECMTELYARSNNL 410



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 202/424 (47%), Gaps = 46/424 (10%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVLYSSEK-SKIDTKT-YCSILQLCADLKSLEDGKKVHSII 122
            ++N+ I      G+  +A+    S  K   I T++ +   ++ C+ L  L  G+  H   
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168

Query: 123  CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
               G   D  V  S L+ M+  CG LK+ R +F++I    V  W  ++  Y +      +
Sbjct: 1169 FVFGFETDLFV-SSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNA 1227

Query: 183  LYLFKKM--------QSLGIAADSYTFSCVLK-CLAV---------------------VG 212
            L LFK              +  DS     VL  C  V                     +G
Sbjct: 1228 LLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIG 1287

Query: 213  NSRRVKDAH----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NL 261
                + DA+          K+FD + ++D +SWN MI+ Y  +G++ + LEVF  M+ ++
Sbjct: 1288 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHV 1347

Query: 262  GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
            G   +  T+  VL  CA+ GAL  G+ +H   +K      +    +++DMY KCG ++ A
Sbjct: 1348 GVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMA 1407

Query: 322  IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             + F++M E++V SWT+M+AGY   G    A+ +F  MVR G++P+     S+L AC+  
Sbjct: 1408 KKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHA 1467

Query: 382  GLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNT 439
            GL+E G    + +K   D++  +     ++D++ + G + +A ++  +M +K D V W +
Sbjct: 1468 GLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGS 1527

Query: 440  MIGA 443
            ++GA
Sbjct: 1528 LLGA 1531



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 174/346 (50%), Gaps = 30/346 (8%)

Query: 325  FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
            ++ + + +V SW S+IA  AR G    A+R F  + + G+ P   +    + +C+    L
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 1158

Query: 385  EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--- 441
              G+  H        ++ L+VS+AL+DMY+KCG + DA ++F+++P++++VSW +MI   
Sbjct: 1159 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 1218

Query: 442  -------GALDLFVAMLQ---------NFEPDGVTMACILPACASLAALERGREIHGYIL 485
                    AL LF   L+         N   D V M  +L AC+ ++       +HG+++
Sbjct: 1219 VQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV 1278

Query: 486  RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
            + G      V N ++D Y KCG  ++++ +FD +  KD ISW  MIA Y   G   +A+ 
Sbjct: 1279 KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALE 1338

Query: 546  TFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC---- 600
             F+ M R  G+  + V+  +VL AC+H+G +  G    + +     I+  LE+  C    
Sbjct: 1339 VFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQV-----IKMDLEYNVCVGTS 1393

Query: 601  MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
            ++D+  + G +  A +  + M    +   W +++ G  +H   K A
Sbjct: 1394 IIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHGRAKEA 1438



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 44/295 (14%)

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
           + +H  I  + + +   ++  L+ +Y+  G +A A  +F Q+      +WN +I      
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 442 ----GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL L+  M+ Q    D  T   ++ AC +  +++ G+ +HG ++++G S D  V 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 497 NAIVDMYVKCGV-------------------------------LVLARSLFDMIPAKDLI 525
           N ++D Y KCG                                L  AR +FD IP+K+++
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           SWT MI GY  +    +A+  F  M+   I P+E + +S++ AC+  G++  G    +  
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
              C IE  +     ++D+ S+ G++ +A    E MP     T W S++    +H
Sbjct: 284 IKNC-IEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT-WNSMITSLGVH 336


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 252/630 (40%), Positives = 390/630 (61%), Gaps = 15/630 (2%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           R+ +A+K+FDE+S+RDV +WN M+SG   N  A + + +F  M+  G   D  T+ +VL 
Sbjct: 118 RISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLP 177

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C   G  +    +H +A+K    KE+   N L+D+Y K G L+ A  VF  M  R +V+
Sbjct: 178 MCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVT 237

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W S+I+G  + G    A+++F+GM   G+ PDV  + S+  A A  G     K +H Y+ 
Sbjct: 238 WNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVM 297

Query: 396 ENDMQ-SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
                   +   NA++DMYAK  ++  A+ +F+ MPV+D VSWNT+I           A+
Sbjct: 298 RRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAV 357

Query: 445 DLFVAMLQNFEPDGV--TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           + +  M ++     +  T   +LPA + L AL++G  +H   ++ G++ D  V   ++D+
Sbjct: 358 ERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDL 417

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG L  A  LF+ +P +    W  +I+G G+HG G +A+  F+ M+Q GI+PD V+F
Sbjct: 418 YAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTF 477

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           +S+L ACSH+GLVD+G  FF++M+   +I P  +HYACM D+L R G L EA+ FI+ MP
Sbjct: 478 VSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMP 537

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + PD+ +WG+LL  CRIH  V++ +  ++++FEL+P+N GYYVL++N+YA+  KW+ V +
Sbjct: 538 IKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDE 597

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK--KIESLLKRLRLEMKREGYF 740
           +R  + R+ L+K PG S IE+K  VN+F +G  + PH +  +I++ L+ L  +++  GY 
Sbjct: 598 VRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYV 657

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
               + L + ++ EKE  L  HSE+LA+AFGI+N P+   + + KNLRVCGDCH   K++
Sbjct: 658 SDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYI 717

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           S+   REI++RDSNRFHHFKDG CSC  FW
Sbjct: 718 SQITEREIIVRDSNRFHHFKDGHCSCGDFW 747



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 205/397 (51%), Gaps = 20/397 (5%)

Query: 289 VHAFALKACFSKEISFNN-TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
           +HA AL+    +   F + +L+  Y + G +  A +VF++M ER V +W +M++G  R  
Sbjct: 89  LHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNA 148

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
               A+ LF  MV EG+  D   ++S+L  C   G   +   +H Y  ++ +   L+V N
Sbjct: 149 RAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCN 208

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEP 456
           AL+D+Y K G + +A+ VF+ M  +D+V+WN++I           AL +F  M      P
Sbjct: 209 ALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSP 268

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVA-NAIVDMYVKCGVLVLARSL 515
           D +T+  +  A A        + +H Y++R G   D  +A NAIVDMY K   +  A+ +
Sbjct: 269 DVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRM 328

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGL 574
           FD +P +D +SW  +I GY  +G   +A+  +  M +  G++  + +F+SVL A SH G 
Sbjct: 329 FDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGA 388

Query: 575 VDEGWRFFNM-MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
           + +G R   + ++   N++  +    C++DL ++ G L+EA    E MP       W ++
Sbjct: 389 LQQGMRMHALSIKIGLNVDVYVG--TCLIDLYAKCGKLAEAMLLFEKMPRRSTGP-WNAI 445

Query: 634 LCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
           + G  +H     A  +   + +  ++PD+  +  LLA
Sbjct: 446 ISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLA 482



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 225/493 (45%), Gaps = 50/493 (10%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T+ S+++      S     ++H+     G+V         LV  ++  G + E  
Sbjct: 67  RPDGFTFPSLIRAA---PSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAY 123

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------- 205
           +VF+++    V  WN ++    +     E++ LF +M   G+A D+ T S VL       
Sbjct: 124 KVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLG 183

Query: 206 -KCLAVVGNSRRVK------------------------DAHKLFDELSDRDVVSWNCMIS 240
            + LA+V +   VK                        +A  +F  +  RD+V+WN +IS
Sbjct: 184 DQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIIS 243

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS- 299
           G    G     L++F+ M   G + D+ T+V++ S  A  G     +++H + ++  +  
Sbjct: 244 GCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDV 303

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +I   N ++DMY+K  +++ A R+F+ M  +  VSW ++I GY + G+ + A+  +  M
Sbjct: 304 DDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHM 363

Query: 360 VR-EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
            + EG++       S+L A +  G L+ G  +H    +  +   +YV   L+D+YAKCG 
Sbjct: 364 QKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGK 423

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPA 467
           +A+A  +F +MP +    WN +I           AL LF  M Q   +PD VT   +L A
Sbjct: 424 LAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAA 483

Query: 468 CASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLI 525
           C+    +++GR     + + + I         + DM  + G L  A +    +P K D  
Sbjct: 484 CSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSA 543

Query: 526 SWTIMIAGYGMHG 538
            W  ++    +HG
Sbjct: 544 VWGALLGACRIHG 556



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 19/291 (6%)

Query: 60  VCKTKNYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGK 116
           V  + ++N  I  + + G   +A+E    +   E  K    T+ S+L   + L +L+ G 
Sbjct: 334 VQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGM 393

Query: 117 KVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
           ++H++  + G+ +D  V G+ L+ ++  CG L E   +F K+       WN ++      
Sbjct: 394 RMHALSIKIGLNVDVYV-GTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVH 452

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVS- 234
           G+  E+L LF +MQ  GI  D  TF   +  LA   ++  V      FD +    D+V  
Sbjct: 453 GHGAEALTLFSRMQQEGIKPDHVTF---VSLLAACSHAGLVDQGRSFFDVMQVTYDIVPI 509

Query: 235 ---WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
              + CM       G A +  E F  + N+    D A    +L  C   G +  G+ V +
Sbjct: 510 AKHYACMADML---GRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGK-VAS 565

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRV---FEKMGERSVVSWTSM 339
             L     + + +   + +MY+K G  DG   V     +   +    W+S+
Sbjct: 566 QNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 616


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 264/653 (40%), Positives = 378/653 (57%), Gaps = 42/653 (6%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A +LFDE+ + ++  WN MI GY      + G+ ++ EML  G   D  T   +  G   
Sbjct: 71  ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             AL +GR +H   LK      +  +  L+ MY  CG LD A  VF+   +  V++W  +
Sbjct: 131 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 190

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I+ Y + G F+ + RLF  M  + + P    +  +L AC+    L  GK VH Y+K   +
Sbjct: 191 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 250

Query: 400 QSSLYVSNALMDMYAKCGSMADA-------------------------------ESVFNQ 428
           +S+L + NA++DMYA CG M  A                                + F++
Sbjct: 251 ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDK 310

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERG 477
           MP KD VSW  MI           AL+LF  M   N +PD  TM  +L ACA L ALE G
Sbjct: 311 MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 370

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
             I  YI R+ I  D  V NA++DMY KCG +  A S+F  +  +D  +WT MI G  ++
Sbjct: 371 EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVN 430

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G G  A+  F++M +A I PDE+++I VL AC+H+GLVD+G ++F  M  +  IEP + H
Sbjct: 431 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 490

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           Y C+VDLL+R G L EAY  IE MP+  ++ +WG+LL GCR++ E  +AE V + + ELE
Sbjct: 491 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 550

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           PDN   YVLL N+YA  ++W ++++LR+ +  +G+KK PGCS IE+ G+V+ FVAG  SH
Sbjct: 551 PDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSH 610

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
           P  K I++ L ++  ++K  GY P      ++  E +KE ++  HSEKLA+AFG++N P 
Sbjct: 611 PQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPP 670

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G TIR+TKNLR+C DCH MAK +SK   RE+++RD  RFHHFK G CSC+ +W
Sbjct: 671 GVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 239/519 (46%), Gaps = 88/519 (16%)

Query: 96  TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT--CGDLKEGRR 153
           T    S+L+ C  +  L+   +VH    + G+  +  VL ++++    T   GD +  RR
Sbjct: 18  THPLISLLETCESMDQLQ---QVHCQAIKKGLNANP-VLQNRVMTFCCTHEYGDFQYARR 73

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA---- 209
           +F++I    +FIWN ++  YS+    +  + L+ +M   G+  D YTF  + K       
Sbjct: 74  LFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIA 133

Query: 210 -------------------VVGNSRRVK---------DAHKLFDELSDRDVVSWNCMISG 241
                              V  ++  V+          A  +FD     DV++WN +IS 
Sbjct: 134 LEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISA 193

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y   G  E+   +F  M +        T+V VLS C+    L  G+ VH++         
Sbjct: 194 YNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESN 253

Query: 302 ISFNNTLLDMYSKCGDLDGAIRV-------------------------------FEKMGE 330
           +   N ++DMY+ CG++D A+ +                               F+KM E
Sbjct: 254 LVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPE 313

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +  VSWT+MI GY R   F  A+ LFR M    ++PD + + S+L ACA  G LE+G+ +
Sbjct: 314 KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWI 373

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--------- 441
             YI  N +++ L+V NAL+DMY KCG +  AES+F +M  +D  +W  MI         
Sbjct: 374 RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHG 433

Query: 442 -GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR----HGISADRNV 495
             ALD+F  ML+ +  PD +T   +L AC     +++GR+   Y LR    HGI  +   
Sbjct: 434 EKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQHGIEPNIAH 490

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
              +VD+  + G L  A  + + +P K + I W  ++AG
Sbjct: 491 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAG 529



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 200/424 (47%), Gaps = 51/424 (12%)

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM--YSKCGDLD 319
            F+     ++++L  C +   L   + VH  A+K   +      N ++      + GD  
Sbjct: 13  SFSPPTHPLISLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ 69

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A R+F+++ E ++  W +MI GY+R       + L+  M+R G++PD Y    +     
Sbjct: 70  YARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT 129

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
            D  LE G+ +H ++ ++ +Q +++V  AL+ MY  CG +  A  VF+  P  D+++WN 
Sbjct: 130 RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 189

Query: 440 MIGALD----------LFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           +I A +          LF+ M  +   P  VT+  +L AC+ L  L  G+++H Y+    
Sbjct: 190 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCK 249

Query: 489 ISADRNVANAIVDMYVKCGVL-------------------------------VLARSLFD 517
           + ++  + NA++DMY  CG +                                +AR+ FD
Sbjct: 250 VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFD 309

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            +P KD +SWT MI GY       +A+  F +M+   ++PDE + +SVL AC+H G ++ 
Sbjct: 310 KMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALEL 369

Query: 578 G-WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           G W    + R +  I+  L     ++D+  + G++ +A      M    D   W +++ G
Sbjct: 370 GEWIRTYIDRNK--IKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMIVG 426

Query: 637 CRIH 640
             ++
Sbjct: 427 LAVN 430



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 200/445 (44%), Gaps = 65/445 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N  I  + +VG  E++  +    E  ++   T T   +L  C+ LK L  GKKVHS +
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 245

Query: 123 ----CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
                ES +V+++ ++      M+  CG++     +F  ++N  +  W  ++  ++  G 
Sbjct: 246 KNCKVESNLVLENAMID-----MYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLG- 299

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
                                                 +  A   FD++ ++D VSW  M
Sbjct: 300 -------------------------------------EIDVARNYFDKMPEKDYVSWTAM 322

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I GYI +   ++ LE+F+ M       D  TMV+VL+ CA+ GAL  G  +  +  +   
Sbjct: 323 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI 382

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             ++   N L+DMY KCGD+D A  +F +M +R   +WT+MI G A  G  + A+ +F  
Sbjct: 383 KNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSN 442

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVH-DYIKENDMQSSLYVSNALMDMYAKCG 417
           M++  I PD      +L AC   GL++ G+        ++ ++ ++     L+D+ A+ G
Sbjct: 443 MLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAG 502

Query: 418 SMADAESVFNQMPVK-DIVSWNTMIGA---------LDLFVAMLQNFEPDGVTMACILPA 467
            + +A  V   MP+K + + W  ++            ++ V  +   EPD   +  +L  
Sbjct: 503 RLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLL-- 560

Query: 468 CASLAALERG---REIHGYILRHGI 489
           C   AA +R    RE+   ++  GI
Sbjct: 561 CNIYAACKRWNDLRELRQMMMDKGI 585


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 264/653 (40%), Positives = 378/653 (57%), Gaps = 42/653 (6%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A +LFDE+ + ++  WN MI GY      + G+ ++ EML  G   D  T   +  G   
Sbjct: 92  ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             AL +GR +H   LK      +  +  L+ MY  CG LD A  VF+   +  V++W  +
Sbjct: 152 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 211

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I+ Y + G F+ + RLF  M  + + P    +  +L AC+    L  GK VH Y+K   +
Sbjct: 212 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 271

Query: 400 QSSLYVSNALMDMYAKCGSMADA-------------------------------ESVFNQ 428
           +S+L + NA++DMYA CG M  A                                + F++
Sbjct: 272 ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDK 331

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERG 477
           MP KD VSW  MI           AL+LF  M   N +PD  TM  +L ACA L ALE G
Sbjct: 332 MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 391

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
             I  YI R+ I  D  V NA++DMY KCG +  A S+F  +  +D  +WT MI G  ++
Sbjct: 392 EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVN 451

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G G  A+  F++M +A I PDE+++I VL AC+H+GLVD+G ++F  M  +  IEP + H
Sbjct: 452 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 511

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           Y C+VDLL+R G L EAY  IE MP+  ++ +WG+LL GCR++ E  +AE V + + ELE
Sbjct: 512 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 571

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           PDN   YVLL N+YA  ++W ++++LR+ +  +G+KK PGCS IE+ G+V+ FVAG  SH
Sbjct: 572 PDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSH 631

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
           P  K I++ L ++  ++K  GY P      ++  E +KE ++  HSEKLA+AFG++N P 
Sbjct: 632 PQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPP 691

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G TIR+TKNLR+C DCH MAK +SK   RE+++RD  RFHHFK G CSC+ +W
Sbjct: 692 GVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 239/519 (46%), Gaps = 88/519 (16%)

Query: 96  TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT--CGDLKEGRR 153
           T    S+L+ C  +  L+   +VH    + G+  +  VL ++++    T   GD +  RR
Sbjct: 39  THPLISLLETCESMDQLQ---QVHCQAIKKGLNANP-VLQNRVMTFCCTHEYGDFQYARR 94

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA---- 209
           +F++I    +FIWN ++  YS+    +  + L+ +M   G+  D YTF  + K       
Sbjct: 95  LFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIA 154

Query: 210 -------------------VVGNSRRVK---------DAHKLFDELSDRDVVSWNCMISG 241
                              V  ++  V+          A  +FD     DV++WN +IS 
Sbjct: 155 LEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISA 214

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y   G  E+   +F  M +        T+V VLS C+    L  G+ VH++         
Sbjct: 215 YNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESN 274

Query: 302 ISFNNTLLDMYSKCGDLDGAIRV-------------------------------FEKMGE 330
           +   N ++DMY+ CG++D A+ +                               F+KM E
Sbjct: 275 LVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPE 334

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +  VSWT+MI GY R   F  A+ LFR M    ++PD + + S+L ACA  G LE+G+ +
Sbjct: 335 KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWI 394

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--------- 441
             YI  N +++ L+V NAL+DMY KCG +  AES+F +M  +D  +W  MI         
Sbjct: 395 RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHG 454

Query: 442 -GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR----HGISADRNV 495
             ALD+F  ML+ +  PD +T   +L AC     +++GR+   Y LR    HGI  +   
Sbjct: 455 EKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQHGIEPNIAH 511

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
              +VD+  + G L  A  + + +P K + I W  ++AG
Sbjct: 512 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAG 550



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 200/424 (47%), Gaps = 51/424 (12%)

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM--YSKCGDLD 319
            F+     ++++L  C +   L   + VH  A+K   +      N ++      + GD  
Sbjct: 34  SFSPPTHPLISLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ 90

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A R+F+++ E ++  W +MI GY+R       + L+  M+R G++PD Y    +     
Sbjct: 91  YARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT 150

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
            D  LE G+ +H ++ ++ +Q +++V  AL+ MY  CG +  A  VF+  P  D+++WN 
Sbjct: 151 RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 210

Query: 440 MIGALD----------LFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           +I A +          LF+ M  +   P  VT+  +L AC+ L  L  G+++H Y+    
Sbjct: 211 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCK 270

Query: 489 ISADRNVANAIVDMYVKCGVL-------------------------------VLARSLFD 517
           + ++  + NA++DMY  CG +                                +AR+ FD
Sbjct: 271 VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFD 330

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            +P KD +SWT MI GY       +A+  F +M+   ++PDE + +SVL AC+H G ++ 
Sbjct: 331 KMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALEL 390

Query: 578 G-WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           G W    + R +  I+  L     ++D+  + G++ +A      M    D   W +++ G
Sbjct: 391 GEWIRTYIDRNK--IKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMIVG 447

Query: 637 CRIH 640
             ++
Sbjct: 448 LAVN 451



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 200/445 (44%), Gaps = 65/445 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N  I  + +VG  E++  +    E  ++   T T   +L  C+ LK L  GKKVHS +
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 266

Query: 123 ----CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
                ES +V+++ ++      M+  CG++     +F  ++N  +  W  ++  ++  G 
Sbjct: 267 KNCKVESNLVLENAMID-----MYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGE 321

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
                                                 +  A   FD++ ++D VSW  M
Sbjct: 322 --------------------------------------IDVARNYFDKMPEKDYVSWTAM 343

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I GYI +   ++ LE+F+ M       D  TMV+VL+ CA+ GAL  G  +  +  +   
Sbjct: 344 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI 403

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             ++   N L+DMY KCGD+D A  +F +M +R   +WT+MI G A  G  + A+ +F  
Sbjct: 404 KNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSN 463

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVH-DYIKENDMQSSLYVSNALMDMYAKCG 417
           M++  I PD      +L AC   GL++ G+        ++ ++ ++     L+D+ A+ G
Sbjct: 464 MLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAG 523

Query: 418 SMADAESVFNQMPVK-DIVSWNTMIGA---------LDLFVAMLQNFEPDGVTMACILPA 467
            + +A  V   MP+K + + W  ++            ++ V  +   EPD   +  +L  
Sbjct: 524 RLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLL-- 581

Query: 468 CASLAALERG---REIHGYILRHGI 489
           C   AA +R    RE+   ++  GI
Sbjct: 582 CNIYAACKRWNDLRELRQMMMDKGI 606


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 255/630 (40%), Positives = 380/630 (60%), Gaps = 15/630 (2%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           RV +A+++FDE+ +RDV +WN M+SG   N  A   + +   M+  G   D  T+ +VL 
Sbjct: 117 RVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLP 176

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C   G       +H +A+K   S E+   N L+D+Y K G L  A  VF  M  R +V+
Sbjct: 177 MCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVT 236

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W S+I+   + G    A+ LF GM+  G+ PDV  + S+  A A  G     K VH Y++
Sbjct: 237 WNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVR 296

Query: 396 ENDMQ-SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
                   +   NA++DMYAK   +  A+ VF+ +P +D+VSWNT+I           A+
Sbjct: 297 RRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAI 356

Query: 445 DLFVAML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
            ++  M   +  +P   T   +LPA + L  L++G  +H   ++ G++ D  V   ++D+
Sbjct: 357 RIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDL 416

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG LV A  LF+ +P +    W  +IAG G+HG G  A++ F+ M+Q  I+PD V+F
Sbjct: 417 YAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTF 476

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           +S+L ACSH+GLVD+G  FF++M+    I P  +HY CMVD+L R G L EA+ FI+ MP
Sbjct: 477 VSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMP 536

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + PD+ +WG+LL  CRIH  V++ +  ++++FEL+P+N GYYVL++N+YA+  KW+ V  
Sbjct: 537 IKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDA 596

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK--KIESLLKRLRLEMKREGYF 740
           +R  + R+ L+K PG S +E+KG V++F +G  + PH +  +I+  L  L  +MK  GY 
Sbjct: 597 VRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYV 656

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P   + L + +E EKE  L  HSE+LA+AFGI+N P G  + + KNLRVCGDCH   K++
Sbjct: 657 PDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYI 716

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK   REI++RD+NRFHHFKDG CSC  FW
Sbjct: 717 SKITEREIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 205/396 (51%), Gaps = 18/396 (4%)

Query: 289 VHAFALK-ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
           +HA AL+       +  + +L+  Y + G +  A RVF++M ER V +W +M++G  R  
Sbjct: 88  LHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNT 147

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
               A+ L   MV EG+  D   ++S+L  C   G   +   +H Y  ++ +   L+V N
Sbjct: 148 RAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCN 207

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEP 456
           AL+D+Y K G + +A  VF  M ++D+V+WN++I           A++LF  M+++   P
Sbjct: 208 ALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCP 267

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVA-NAIVDMYVKCGVLVLARSL 515
           D +T+  +  A A        + +H Y+ R G      +A NA+VDMY K   +  A+ +
Sbjct: 268 DVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKV 327

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR-QAGIEPDEVSFISVLYACSHSGL 574
           FD +P +D++SW  +I GY  +G   +AI  +NDM    G++P + +F+SVL A S+ G 
Sbjct: 328 FDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGG 387

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           + +G R  + +  +  +   +    C++DL ++ G L EA    E MP       W +++
Sbjct: 388 LQQGMR-MHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGP-WNAII 445

Query: 635 CGCRIH-HEVKLAEKVAE-HVFELEPDNTGYYVLLA 668
            G  +H H  K     ++    E++PD+  +  LLA
Sbjct: 446 AGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLA 481



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 219/469 (46%), Gaps = 47/469 (10%)

Query: 117 KVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
           ++H+     G++  +      LV  ++  G + E  RVF+++    V  WN ++    + 
Sbjct: 87  QLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRN 146

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVL--------KCLAVVGNSRRVK---------- 218
               +++ L  +M   G+A D+ T S VL        + LA+V +   VK          
Sbjct: 147 TRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVC 206

Query: 219 --------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                         +AH +F  ++ RD+V+WN +IS     G     +E+F  M+  G  
Sbjct: 207 NALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVC 266

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFS-KEISFNNTLLDMYSKCGDLDGAIR 323
            D+ T+V++ S  A CG  +  ++VH +  +  +   +I   N ++DMY+K   +D A +
Sbjct: 267 PDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQK 326

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGIEPDVYAITSILHACACDG 382
           VF+ + +R VVSW ++I GY + G+ + AIR++  M   EG++P      S+L A +  G
Sbjct: 327 VFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLG 386

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
            L+ G  +H    +  +   +YV+  L+D+YAKCG + +A  +F  MP +    WN +I 
Sbjct: 387 GLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIA 446

Query: 443 ----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGIS 490
                     AL LF  M Q   +PD VT   +L AC+    +++GR     +   +GI 
Sbjct: 447 GLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIV 506

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
                   +VDM  + G L  A      +P K D   W  ++    +HG
Sbjct: 507 PIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHG 555



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 94/435 (21%), Positives = 172/435 (39%), Gaps = 81/435 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N+ I    + G +  A+E+ +   +S +  D  T  S+    A        K VH  +
Sbjct: 236 TWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYV 295

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G  + D + G+ +V M+     +   ++VF+ + +  V  WN L+  Y + G   E+
Sbjct: 296 RRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEA 355

Query: 183 LYLFKKMQS------------------------------------LGIAADSYTFSCVLK 206
           + ++  M +                                     G+  D Y  +C++ 
Sbjct: 356 IRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLID 415

Query: 207 CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
             A  G   ++ +A  LF+ +  R    WN +I+G   +G   K L +F +M       D
Sbjct: 416 LYAKCG---KLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPD 472

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             T V++L+ C++ G +  GR               SF + +  +Y       G + + +
Sbjct: 473 HVTFVSLLAACSHAGLVDQGR---------------SFFDLMQTVY-------GIVPIAK 510

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
                    +T M+    R G  D A    + M    I+PD     ++L AC   G +E+
Sbjct: 511 H--------YTCMVDMLGRAGQLDEAFEFIQSMP---IKPDSAVWGALLGACRIHGNVEM 559

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM--ADA-ESVFNQMPVKDIVSWNTM--I 441
           GK     + E D ++  Y    + +MYAK G     DA  S+  +  ++    W++M   
Sbjct: 560 GKVASQNLFELDPENVGYYV-LMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVK 618

Query: 442 GALDLFVAMLQNFEP 456
           G++ +F +  Q  EP
Sbjct: 619 GSVSVFYSGTQT-EP 632


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 282/776 (36%), Positives = 421/776 (54%), Gaps = 83/776 (10%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           YC++L+LC +  +    K +HS I ++ +   +  L + L+  +   G +    +VF+++
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKT-LPYPETFLLNNLISSYAKLGSIPYACKVFDQM 70

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
            +  ++ WN ++  YSK G   E  Y                                  
Sbjct: 71  PHPNLYSWNTILSAYSKLGRVSEMEY---------------------------------- 96

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSG 276
               LFD +  RD VSWN +ISGY   G+  + ++ +  ML  +  FN++  T  T+L  
Sbjct: 97  ----LFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLIL 152

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK---------------------- 314
            +  G +  GR +H   +K  F   +   + L+DMYSK                      
Sbjct: 153 ASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMY 212

Query: 315 ---------CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
                    CG ++ + R+F +M ER  +SWTSMI G+ + G+   AI +FR M  E ++
Sbjct: 213 NTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQ 272

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
            D Y   S+L AC     L+ GK VH YI   D + +++V++AL+DMY KC ++  AE+V
Sbjct: 273 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAV 332

Query: 426 FNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAAL 474
           F +M  K++VSW  M+           A+  F  M +   EPD  T+  ++ +CA+LA+L
Sbjct: 333 FKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASL 392

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           E G + H   L  G+ +   V+NA+V +Y KCG +  +  LF+ I  KD ++WT +++GY
Sbjct: 393 EEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGY 452

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
              G   + I  F  M   G++PD+V+FI VL ACS +GLV++G + F  M  E  I P 
Sbjct: 453 AQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPI 512

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
            +HY CM+DL SR G + EA  FI  MP +PDA  W +LL  CR +  + + +  AE + 
Sbjct: 513 QDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLM 572

Query: 655 ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG 714
           EL+P NT  YVLL++VYA   KWEEV +LR+ +  +GL+K PGCSWI+ K +V++F A  
Sbjct: 573 ELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADD 632

Query: 715 SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
            S+P + +I S L++L  +M +EGY P     L +  + EK   L  HSEKLA+AFG+L 
Sbjct: 633 KSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLF 692

Query: 775 LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +P G  IRV KNLRVC DCH   K++SK   REI++RD+ RFH FKDG CSC  FW
Sbjct: 693 IPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 35/286 (12%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E  ++D  T+ S+L  C  + +L++GK+VH+ I  +    D+  + S LV M+  C ++K
Sbjct: 269 ENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK-DNIFVASALVDMYCKCKNIK 327

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
               VF K+    V  W  ++  Y + G  +E++  F  MQ  GI  D +T   V+   A
Sbjct: 328 SAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCA 387

Query: 210 --------------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNC 237
                                           + G    ++D+H+LF+E+S +D V+W  
Sbjct: 388 NLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTA 447

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           ++SGY   G A + + +F+ ML  G   D  T + VLS C+  G +  G  +    +   
Sbjct: 448 LVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEH 507

Query: 298 FSKEISFNNT-LLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIA 341
               I  + T ++D++S+ G ++ A     KM      +SW ++++
Sbjct: 508 GIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 146/348 (41%), Gaps = 95/348 (27%)

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSL---------YVSNALMDMYAKCGSMADAESVF 426
           H CA   LL++  + H++ K  ++ S +         ++ N L+  YAK GS+  A  VF
Sbjct: 11  HYCA---LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVF 67

Query: 427 NQMPVKDIVSWNTMIGALD----------LFVA--------------------------- 449
           +QMP  ++ SWNT++ A            LF A                           
Sbjct: 68  DQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVK 127

Query: 450 ----MLQN---FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
               ML+N   F  + +T + +L   +    ++ GR+IHG++++ G  +   V + +VDM
Sbjct: 128 AYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDM 187

Query: 503 YVKCGVLVLARSLFDMIPAK-------------------------------DLISWTIMI 531
           Y K G++  AR +FD +P K                               D ISWT MI
Sbjct: 188 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR---FFNMMRYE 588
            G+  +G   DAI  F +M+   ++ D+ +F SVL AC     + EG +   +     Y+
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK 307

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            NI       + +VD+  +  N+  A    + M    +   W ++L G
Sbjct: 308 DNIFVA----SALVDMYCKCKNIKSAEAVFKKM-TCKNVVSWTAMLVG 350



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 158/354 (44%), Gaps = 45/354 (12%)

Query: 52  SASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCAD 108
           + ++ K + CK   ++ A +  + + G  E+A++     +K  I  D  T  S++  CA+
Sbjct: 329 AEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCAN 388

Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNL 168
           L SLE+G + H+    SG+ I    + + LV ++  CG +++  R+FN+I       W  
Sbjct: 389 LASLEEGAQFHARALTSGL-ISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTA 447

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+  Y++ G   E++ LF+ M + G+  D  TF  VL   +  G    V+  +++F+ + 
Sbjct: 448 LVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAG---LVEKGNQIFESMI 504

Query: 229 DRDVV-----SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           +   +      + CMI  +   G  E+      +M    F+ D  +  T+LS C   G +
Sbjct: 505 NEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKM---PFSPDAISWATLLSSCRFYGNM 561

Query: 284 MFGRAVHAFALKACFSKEISFNNT-----LLDMYSKCGDLDGAIRVFEKMGERSV----- 333
             G+    F +      E+  +NT     L  +Y+  G  +   R+ + M ++ +     
Sbjct: 562 DIGKWAAEFLM------ELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPG 615

Query: 334 VSW------TSMIAGYAREGVFDGAI-----RLFRGMVREGIEPDVYAITSILH 376
            SW        + +   +   F   I     +L   M++EG  PD   + S+LH
Sbjct: 616 CSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPD---MNSVLH 666


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 281/792 (35%), Positives = 436/792 (55%), Gaps = 48/792 (6%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L S+     D  T   + + CA +  +E G+ VH++  ++G    D  +G+ L+ M+  C
Sbjct: 185 LLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAG-GFSDAFVGNALIAMYGKC 243

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM---QSLGIAADSYTFS 202
           G ++   +VF  + N  +  WN +M+  S+ G F E   +FK++   +  G+  D  T  
Sbjct: 244 GFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMV 303

Query: 203 CVLKCLAVVGNSRR--------------------------------VKDAHKLFDELSDR 230
            V+   A VG  R                                 + +A  LFD    +
Sbjct: 304 TVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGK 363

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           +VVSWN +I GY   G      E+ +EM       V+  T++ VL  C+    L+  + +
Sbjct: 364 NVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEI 423

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H +A +  F K+    N  +  Y+KC  LD A RVF  M  ++V SW ++I  +A+ G  
Sbjct: 424 HGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFP 483

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             ++ LF  M+  G++PD + I S+L ACA    L  GK++H ++  N ++   ++  +L
Sbjct: 484 GKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISL 543

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDG 458
           M +Y +C SM   + +F++M  K +V WN MI           ALD F  ML    +P  
Sbjct: 544 MSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQE 603

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           + +  +L AC+ ++AL  G+E+H + L+  +S D  V  A++DMY KCG +  ++++FD 
Sbjct: 604 IAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDR 663

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +  KD   W ++IAGYG+HG G  AI  F  M+  G  PD  +F+ VL AC+H+GLV EG
Sbjct: 664 VNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEG 723

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
            ++   M+    ++PKLEHYAC+VD+L R G L+EA + +  MP  PD+ IW SLL  CR
Sbjct: 724 LKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCR 783

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
            + ++++ E+V++ + ELEP+    YVLL+N+YA   KW+EV+K+R+++   GL K+ GC
Sbjct: 784 NYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGC 843

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           SWIEI G V  F+    S   +KKI+    +L  ++ + GY P T   L   +E  K   
Sbjct: 844 SWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKI 903

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
           L  HSEKLA++FG+LN   G T+RV KNLR+C DCH   K +SK  +R+I++RD+ RFHH
Sbjct: 904 LKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHH 963

Query: 819 FKDGRCSCRGFW 830
           FK+G C+C  FW
Sbjct: 964 FKNGLCTCGDFW 975



 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 198/663 (29%), Positives = 339/663 (51%), Gaps = 65/663 (9%)

Query: 58  TLVCKTKNYNAEIGRF---CEVGNLEKAMEVLYSSEK------SKIDTKTYCSILQLCAD 108
           +L   TK ++  + R    C+ GNL  A+ +L+S  +      S I  +    +L+ C  
Sbjct: 45  SLTSHTKTHSPILQRLHNLCDSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGH 104

Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNL 168
            K++  G+KVH+++  S  + +D VL ++++ M+  CG   + R VF+      +F++N 
Sbjct: 105 HKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNA 164

Query: 169 LMHEYSKTGNFKESLYLFKKMQS-LGIAADSYTFSCVLKC-------------------- 207
           L+  YS+   F++++ LF ++ S   +A D++T  CV K                     
Sbjct: 165 LLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKA 224

Query: 208 ------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                       +A+ G    V+ A K+F+ + +R++VSWN ++     NG   +   VF
Sbjct: 225 GGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVF 284

Query: 256 KEML---NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           K +L     G   D+ATMVTV+  CA  G +  G  VH  A K   ++E++ NN+L+DMY
Sbjct: 285 KRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMY 344

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAI 371
           SKCG L  A  +F+  G ++VVSW ++I GY++EG F G   L + M R E +  +   +
Sbjct: 345 SKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTV 404

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            ++L AC+ +  L   K++H Y   +       V+NA +  YAKC S+  AE VF  M  
Sbjct: 405 LNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEG 464

Query: 432 KDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI 480
           K + SWN +IGA          LDLF+ M+ +  +PD  T+  +L ACA L  L  G+EI
Sbjct: 465 KTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEI 524

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           HG++LR+G+  D  +  +++ +Y++C  ++L + +FD +  K L+ W +MI G+  +   
Sbjct: 525 HGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELP 584

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
           C+A+ TF  M   GI+P E++   VL ACS    +  G +  +    + ++         
Sbjct: 585 CEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLG-KEVHSFALKAHLSEDAFVTCA 643

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH-HEVKLAEKVAEHVFELEPD 659
           ++D+ ++ G + ++    + +    D  +W  ++ G  IH H +K  E     +FEL  +
Sbjct: 644 LIDMYAKCGCMEQSQNIFDRVN-EKDEAVWNVIIAGYGIHGHGLKAIE-----LFELMQN 697

Query: 660 NTG 662
             G
Sbjct: 698 KGG 700



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 198/458 (43%), Gaps = 60/458 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  I  + + G+     E+L      EK +++  T  ++L  C+    L   K++H  
Sbjct: 367 SWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGY 426

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
               G + D+ ++ +  V  +  C  L    RVF  ++   V  WN L+  +++ G   +
Sbjct: 427 AFRHGFLKDE-LVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGK 485

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK------------------- 222
           SL LF  M   G+  D +T   +L   A +   R  K+ H                    
Sbjct: 486 SLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMS 545

Query: 223 -------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                        +FD++ ++ +V WN MI+G+  N +  + L+ F++ML+ G       
Sbjct: 546 LYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIA 605

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +  VL  C+   AL  G+ VH+FALKA  S++      L+DMY+KCG ++ +  +F+++ 
Sbjct: 606 VTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVN 665

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-K 388
           E+    W  +IAGY   G    AI LF  M  +G  PD +    +L AC   GL+  G K
Sbjct: 666 EKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLK 725

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFV 448
            +        ++  L     ++DM  + G + +A  + N+MP                  
Sbjct: 726 YLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPD----------------- 768

Query: 449 AMLQNFEPDGVTMACILPACASLAALERGREIHGYILR 486
                 EPD    + +L +C +   LE G E+   +L 
Sbjct: 769 ------EPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLE 800



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 174/407 (42%), Gaps = 85/407 (20%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSII 122
           ++NA IG   + G   K++++      S +D   +   S+L  CA LK L  GK++H  +
Sbjct: 469 SWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFM 528

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +G+ +D+  +G  L+ +++ C  +  G+ +F+K++N  +  WN+++  +S+     E+
Sbjct: 529 LRNGLELDE-FIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEA 587

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH--------------------- 221
           L  F++M S GI       + VL   + V   R  K+ H                     
Sbjct: 588 LDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDM 647

Query: 222 -----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                       +FD ++++D   WN +I+GY  +G   K +E+F+ M N G   D  T 
Sbjct: 648 YAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTF 707

Query: 271 VTVLSGCANCGALM-----FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           + VL  C + G +       G+  + + +K     ++     ++DM  + G L  A+++ 
Sbjct: 708 LGVLIACNHAGLVTEGLKYLGQMQNLYGVKP----KLEHYACVVDMLGRAGQLTEALKLV 763

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
            +M +                                  EPD    +S+L +C   G LE
Sbjct: 764 NEMPD----------------------------------EPDSGIWSSLLSSCRNYGDLE 789

Query: 386 IGKDVHDYIKE---NDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           IG++V   + E   N  ++ + +SN    +YA  G   +   V  +M
Sbjct: 790 IGEEVSKKLLELEPNKAENYVLLSN----LYAGLGKWDEVRKVRQRM 832


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 269/720 (37%), Positives = 411/720 (57%), Gaps = 43/720 (5%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------- 206
           VF+++       +  L+H Y+++  F E+  LF ++   G   + + F+ VLK       
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 207 ---------CLAVVGNSRR----------------VKDAHKLFDELSDRDVVSWNCMISG 241
                    C+  VG                    V  A ++FDE+S +D+VSW  MI+ 
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y  N    + LE F +M   GF  +  T   VL  C        G+ VH   LK  + ++
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +     LL++Y++CGD D A R F  M +  V+ W+ MI+ +A+ G  + A+ +F  M R
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
             + P+ +  +S+L A A    L++ K +H +  +  + + ++VSNALM  YAKCG +  
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQ 301

Query: 422 AESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACAS 470
           +  +F  +  ++ VSWNT+I           AL LF  ML+   +   VT + IL ACA+
Sbjct: 302 SMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACAT 361

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           LAALE G ++H    +     D  V NA++DMY KCG +  AR +FDM+  +D +SW  +
Sbjct: 362 LAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAI 421

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I GY MHG G +AI  FN M++   +PDE++F+ VL ACS++G +DEG ++F  M+ +  
Sbjct: 422 ICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYG 481

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           IEP +EHY CMV L+ R+GNL +A +FIE +P  P   IW +LL  C IH++V+L    A
Sbjct: 482 IEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISA 541

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
           + V ELEP +   +VLL+N+YA A +W  V  +R+ + R+G+KK PG SWIE +G V+ F
Sbjct: 542 QRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCF 601

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
               +SH   K I  +L+ L ++ ++ GY P+    L++ ++ EKE  L  HSE+LA+AF
Sbjct: 602 TVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAF 661

Query: 771 GILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G++ +PAG  IR+ KNLR+C DCH + K +SK   R+I++RD NRFHHF++G CSC  +W
Sbjct: 662 GLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 215/433 (49%), Gaps = 44/433 (10%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E  +++   + ++L+L   ++  E G+ VH  + + G    +  +G+ L+  +   G + 
Sbjct: 40  EGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYG-SNTFIGTALIDAYSVSGCVS 98

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK--- 206
             R VF++I +  +  W  ++  Y++   F E+L  F +M+  G   +++TF+ VLK   
Sbjct: 99  MAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACL 158

Query: 207 ------------CLAVVGNSRR-----------------VKDAHKLFDELSDRDVVSWNC 237
                       C  +  N  R                   DA + F ++   DV+ W+ 
Sbjct: 159 GLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSF 218

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MIS +  +G +EK LE+F +M       +  T  +VL   A+  +L   + +H  ALKA 
Sbjct: 219 MISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAG 278

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
            S ++  +N L+  Y+KCG ++ ++ +FE + +R+ VSW ++I  Y + G  + A+ LF 
Sbjct: 279 LSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFS 338

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M+R  ++      +SIL ACA    LE+G  VH    +      + V NAL+DMYAKCG
Sbjct: 339 NMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCG 398

Query: 418 SMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILP 466
           S+ DA  +F+ + ++D VSWN +I           A+ +F  M +   +PD +T   +L 
Sbjct: 399 SIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLS 458

Query: 467 ACASLAALERGRE 479
           AC++   L+ G++
Sbjct: 459 ACSNTGRLDEGKQ 471



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 144/310 (46%), Gaps = 39/310 (12%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I RF + G  EKA+E+     ++ +  +  T+ S+LQ  AD++SL+  K +H    ++G+
Sbjct: 220 ISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGL 279

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
             D  V  + L+  +  CG +++   +F  + +     WN ++  Y + G+ + +L LF 
Sbjct: 280 STDVFV-SNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFS 338

Query: 188 KMQSLGIAADSYTFSCVLKCLAV------------------------VGNSR-------- 215
            M    + A   T+S +L+  A                         VGN+         
Sbjct: 339 NMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCG 398

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
            +KDA  +FD L  RD VSWN +I GY  +G+  + +++F  M       D  T V VLS
Sbjct: 399 SIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLS 458

Query: 276 GCANCGALMFGRAVHAFALKACFSKE--ISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERS 332
            C+N G L  G+     ++K  +  E  +     ++ +  + G+LD A++  E +  E S
Sbjct: 459 ACSNTGRLDEGKQYFT-SMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPS 517

Query: 333 VVSWTSMIAG 342
           V+ W +++  
Sbjct: 518 VMIWRALLGA 527



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 6/165 (3%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  + ++G+ E+A+ +  +  + ++     TY SIL+ CA L +LE G +VH + 
Sbjct: 316 SWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLT 375

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++ I   D  +G+ L+ M+  CG +K+ R +F+ +D      WN ++  YS  G   E+
Sbjct: 376 AKT-IYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEA 434

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL 227
           + +F  M+      D  TF  V   L+   N+ R+ +  + F  +
Sbjct: 435 IKMFNLMKETKCKPDELTFVGV---LSACSNTGRLDEGKQYFTSM 476


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/622 (42%), Positives = 373/622 (59%), Gaps = 51/622 (8%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +FDE++D++VV +N MI  Y+ NG+ +  L VFK M N GF  D  T   VL  C+  G 
Sbjct: 93  IFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGN 152

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G  +H   +K      +   N L+ MY KC  LD A RV ++M  R +VSW SM+AG
Sbjct: 153 LWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAG 212

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA---CACDGLLEIGKDVHDYIKENDM 399
           YA+ G F+ A++L R M    ++PD   + S+L A    +CD +L        Y+K    
Sbjct: 213 YAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVL--------YVK---- 260

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
                      DM+ K             +  K ++SWN MI           A+DL++ 
Sbjct: 261 -----------DMFVK-------------LKEKSLISWNVMIAVYVNNAMPNEAVDLYLQ 296

Query: 450 M-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M +   EPD V+++ +LPAC  L+A   GR IH Y+ R  +  +  + NA++DMY KCG 
Sbjct: 297 MQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGC 356

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  AR++FD +  +D++SWT MI+ YGM G G DA+A F  MR +G  PD ++F+SVL A
Sbjct: 357 LKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAA 416

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSH+GLVDEG   FN+M  E  I P +EHY CMVDLL R G + EAY     MP+ P+  
Sbjct: 417 CSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNER 475

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           +WGSLL  CR++  + +A   A+H+F+L P+ +GYYVLL+N+YA+A +W++V+ +R  ++
Sbjct: 476 VWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMN 535

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
            +G+KK PG S +EI   V  F+AG  SH  +K+I   L  L   MK  GY P+T  AL 
Sbjct: 536 SKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALH 595

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + +E +KE  L  HSEKLA+ F ILN   G TIR+TKN+RVCGDCH   K +SK A REI
Sbjct: 596 DVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREI 655

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           ++RD++RFHHF+DG CSC  +W
Sbjct: 656 IIRDTHRFHHFRDGVCSCGDYW 677



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 222/469 (47%), Gaps = 80/469 (17%)

Query: 96  TKTYCS-ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           T+  C+ IL +  D K+L   KK+HS I     +  +  LG KL+  +  CG+    R +
Sbjct: 37  TEDLCNKILDVNPDAKTL---KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHI 93

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN- 213
           F++I +  V  +N+++  Y   G ++++L +FK M + G   D+YT+ CVLK  +V GN 
Sbjct: 94  FDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNL 153

Query: 214 -------------------------------SRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                           + +  A ++ DE+  RD+VSWN M++GY
Sbjct: 154 WVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGY 213

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             NG     L++ +EM +L    D  TM ++L    N                       
Sbjct: 214 AQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTN----------------------- 250

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
                     + C ++     +F K+ E+S++SW  MIA Y    + + A+ L+  M   
Sbjct: 251 ----------TSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVH 300

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G+EPD  +I+S+L AC       +G+ +H+Y++   ++ +L + NAL+DMYAKCG + +A
Sbjct: 301 GVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEA 360

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASL 471
            +VF+QM  +D+VSW +MI           A+ LF  M  + F PD +    +L AC+  
Sbjct: 361 RAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHA 420

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
             ++ GR     +  +GI+      N +VD+  + G +  A  L   +P
Sbjct: 421 GLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMP 469



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 190/359 (52%), Gaps = 7/359 (1%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  TY  +L+ C+   +L  G ++H  + + G+ ++   +G+ LV M+  C  L   RRV
Sbjct: 136 DNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMN-LYIGNGLVSMYGKCKWLDAARRV 194

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG-- 212
            +++    +  WN ++  Y++ G F ++L L ++M+ L +  D+ T   +L  +      
Sbjct: 195 LDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCD 254

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           N   VKD   +F +L ++ ++SWN MI+ Y+ N +  + ++++ +M   G   D  ++ +
Sbjct: 255 NVLYVKD---MFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISS 311

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           VL  C +  A + GR +H +  +      +   N L+DMY+KCG L  A  VF++M  R 
Sbjct: 312 VLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRD 371

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           VVSWTSMI+ Y   G    A+ LF+ M   G  PD  A  S+L AC+  GL++ G+   +
Sbjct: 372 VVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFN 431

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLFVAM 450
            + E  +   +   N ++D+  + G + +A  +  QMP++ +   W +++ A  ++ +M
Sbjct: 432 LMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSM 490


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 265/673 (39%), Positives = 387/673 (57%), Gaps = 47/673 (6%)

Query: 205 LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-F 263
           LK + V  NS  ++ A  LFD++   D+ +W  +IS    +G + + ++ + +  +    
Sbjct: 15  LKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCV 74

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             D   +++V   CA+   +M  + VH  A++  F  ++   N L+DMY KC   +GA  
Sbjct: 75  EPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARL 134

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VFE M  R V+SWTSM + Y   G+   A+  FR M   G  P+   ++SIL AC     
Sbjct: 135 VFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKD 194

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
           L+ G++VH ++  N M  +++VS+AL++MYA C S+  A+ VF+ M  +D VSWN +I A
Sbjct: 195 LKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITA 254

Query: 444 ----------LDLFVAML----------------------------------QN--FEPD 457
                     L +F  M+                                  QN  F+P+
Sbjct: 255 YFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPN 314

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
            +T+  +LPAC +L +L  G++IHGYI RH    D     A+V MY KCG L L+R +F 
Sbjct: 315 QITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFS 374

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
           M+  +D +SW  MI    MHG G +A+  F +M  +G+ P+ V+F  VL  CSHS LVDE
Sbjct: 375 MMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDE 434

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           G   F+ M  + ++EP  +H++CMVD+LSR G L EAY FI+ MP+ P A  WG+LL GC
Sbjct: 435 GLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGC 494

Query: 638 RIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPG 697
           R++  V+L    A  +FE+E DN G YVLL+N+   A+ W E  + R+ +  RG+ KNPG
Sbjct: 495 RVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPG 554

Query: 698 CSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEV 757
           CSWI+++ +V+ FV G  S+  + +I   L  +  +M+  GY P T + L + D+ EKE 
Sbjct: 555 CSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEE 614

Query: 758 ALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFH 817
            LC HSEKLA+AFG+LNL    +IRV KNLR+CGDCH   KFM+K    +I++RDS RFH
Sbjct: 615 VLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFH 674

Query: 818 HFKDGRCSCRGFW 830
           HF+DG CSC+ FW
Sbjct: 675 HFRDGLCSCQDFW 687



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 173/357 (48%), Gaps = 37/357 (10%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + ++ T  SIL  C DLK L+ G++VH  +  +G+   +  + S LV M+ +C  +++ +
Sbjct: 176 RPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMG-GNVFVSSALVNMYASCLSIRQAQ 234

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            VF+ +       WN+L+  Y      ++ L +F +M S G+                  
Sbjct: 235 LVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGL---------------- 278

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
                             +  SWN +I G + NG  EK LEV   M N GF  +  T+ +
Sbjct: 279 ------------------NYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITS 320

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           VL  C N  +L  G+ +H +  +  F ++++    L+ MY+KCGDL+ + RVF  M +R 
Sbjct: 321 VLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRD 380

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
            VSW +MI   +  G  + A+ LFR MV  G+ P+    T +L  C+   L++ G  + D
Sbjct: 381 TVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFD 440

Query: 393 YI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV-SWNTMIGALDLF 447
            + +++ ++      + ++D+ ++ G + +A     +MP++    +W  ++G   ++
Sbjct: 441 SMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVY 497



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 197/481 (40%), Gaps = 81/481 (16%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           L  K + ++   GDL+  R +F+KI    +  W +L+   +K G   E++  +   +   
Sbjct: 13  LALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKN 72

Query: 194 -IAADSYTFSCVLKCLAV---VGNSRRVKD-----------------------------A 220
            +  D      V K  A    V N++RV +                             A
Sbjct: 73  CVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGA 132

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
             +F+ +  RDV+SW  M S Y+  G+  + L  F++M   G   +  T+ ++L  C + 
Sbjct: 133 RLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDL 192

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
             L  GR VH F ++      +  ++ L++MY+ C  +  A  VF+ M  R  VSW  +I
Sbjct: 193 KDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLI 252

Query: 341 AGY-----------------------------------AREGVFDGAIRLFRGMVREGIE 365
             Y                                    + G  + A+ +   M   G +
Sbjct: 253 TAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFK 312

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P+   ITS+L AC     L  GK +H YI  +     L  + AL+ MYAKCG +  +  V
Sbjct: 313 PNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRV 372

Query: 426 FNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAAL 474
           F+ M  +D VSWNTMI           AL LF  M+ +   P+ VT   +L  C+    +
Sbjct: 373 FSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLV 432

Query: 475 ERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI-SWTIMIA 532
           + G  I   + R H +  D +  + +VD+  + G L  A      +P +    +W  ++ 
Sbjct: 433 DEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLG 492

Query: 533 G 533
           G
Sbjct: 493 G 493



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 11/201 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA IG   + G  EKA+EVL   + S  K +  T  S+L  C +L+SL  GK++H  I
Sbjct: 282 SWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYI 341

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
                   D    + LVFM+  CGDL+  RRVF+ +       WN ++   S  GN +E+
Sbjct: 342 FRHWF-FQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEA 400

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-----DRDVVSWNC 237
           L LF++M   G+  +S TF+ VL   +   +SR V +   +FD +S     + D    +C
Sbjct: 401 LLLFREMVDSGVRPNSVTFTGVLSGCS---HSRLVDEGLLIFDSMSRDHSVEPDADHHSC 457

Query: 238 MISGYIANGVAEKGLEVFKEM 258
           M+      G  E+  E  K+M
Sbjct: 458 MVDVLSRAGRLEEAYEFIKKM 478



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
           ++A   + +Y   G L  AR LFD IP  DL +WTI+I+    HG   +AI  +ND R  
Sbjct: 12  HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71

Query: 554 G-IEPDEVSFISVLYACS 570
             +EPD++  +SV  AC+
Sbjct: 72  NCVEPDKLLLLSVAKACA 89


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 283/814 (34%), Positives = 426/814 (52%), Gaps = 120/814 (14%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD---LKEGRRVF 155
           Y  +LQLC    +   G+ +H+   ++G++    +  + L +   T G    L++ RR+F
Sbjct: 29  YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88

Query: 156 NKIDNGK--VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           ++I   +  VF WN L+  ++K+G                                    
Sbjct: 89  DEIPLARRNVFTWNSLLSMFAKSG------------------------------------ 112

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
             R+ DA  +F E+ +RD VSW  M+ G    G   + ++   +M   GF     T+  V
Sbjct: 113 --RLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNV 170

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK------ 327
           LS CA   A   GR VH+F +K      +   N++L+MY KCGD + A  VFE+      
Sbjct: 171 LSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSV 230

Query: 328 -------------------------MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
                                    M +RS+VSW +MIAGY + G+   A++LF  M+ E
Sbjct: 231 SSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHE 290

Query: 363 -GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
             + PD + ITS+L ACA  G + IGK VH YI   +M  +  V+NAL+  YAK GS+ +
Sbjct: 291 SSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVEN 350

Query: 422 AESVFNQ---------------------------------MPVKDIVSWNTMI------- 441
           A  + +Q                                 M  +D+V+W  MI       
Sbjct: 351 ARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNG 410

Query: 442 ---GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
               A+DLF +M+    EP+  T+A +L  CASLA L+ G++IH   +R  +    +V+N
Sbjct: 411 RNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSN 470

Query: 498 AIVDMYVKCGVLVLARSLFDMI-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           AI+ MY + G    AR +FD +   K+ I+WT MI     HG G +A+  F +M +AG+E
Sbjct: 471 AIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVE 530

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           PD ++++ VL ACSH+G V+EG R+++ ++ E  I P++ HYACMVDLL+R G  SEA  
Sbjct: 531 PDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQE 590

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
           FI  MPV PDA  WGSLL  CR+H   +LAE  AE +  ++P+N+G Y  +ANVY+   +
Sbjct: 591 FIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGR 650

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           W +  ++ +    + ++K  G SW  I+ K+++F A    HP    + ++  R+  E+K 
Sbjct: 651 WSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKG 710

Query: 737 EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
            G+ P  +  L + D+  KE  L  HSEKLA+AFG+++ P   T+RV KNLRVC DCH  
Sbjct: 711 AGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAA 770

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            K +SK   REI++RD+ RFHHF+DG CSC+ +W
Sbjct: 771 IKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 222/492 (45%), Gaps = 95/492 (19%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESG----IVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           T  ++L  CA  ++   G+KVHS + + G    + + + VL      M+  CGD +    
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLN-----MYGKCGDSETATT 220

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VF ++    V  WN ++   +  G    +  LF+ M                        
Sbjct: 221 VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESM------------------------ 256

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN-LGFNVDLATMVT 272
                          DR +VSWN MI+GY  NG+  K L++F  ML+      D  T+ +
Sbjct: 257 --------------PDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITS 302

Query: 273 VLSGCANCGALMFGRAVHAF--------------ALKACFSKEISFNN------------ 306
           VLS CAN G +  G+ VHA+              AL + ++K  S  N            
Sbjct: 303 VLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD 362

Query: 307 -------TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                   LL+ Y K GD++ A  +F  M  R VV+WT+MI GY + G  D AI LFR M
Sbjct: 363 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           +  G EP+ Y + ++L  CA    L+ GK +H     + ++ S  VSNA++ MYA+ GS 
Sbjct: 423 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSF 482

Query: 420 ADAESVFNQM-PVKDIVSWNTMIGAL----------DLFVAMLQ-NFEPDGVTMACILPA 467
             A  +F+Q+   K+ ++W +MI AL           LF  ML+   EPD +T   +L A
Sbjct: 483 PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 542

Query: 468 CASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLI 525
           C+    +  G+  +  I   H I+ + +    +VD+  + G+   A+     +P + D I
Sbjct: 543 CSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 602

Query: 526 SWTIMIAGYGMH 537
           +W  +++   +H
Sbjct: 603 AWGSLLSACRVH 614



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 103/460 (22%), Positives = 182/460 (39%), Gaps = 111/460 (24%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV----LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++NA I  + + G   KA+++    L+ S  +  D  T  S+L  CA+L ++  GK+VH+
Sbjct: 263 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAP-DEFTITSVLSACANLGNVRIGKQVHA 321

Query: 121 IICESGIVIDDGVLG--------------------------------SKLVFMFVTCGDL 148
            I  + +  +  V                                  + L+  +V  GD+
Sbjct: 322 YILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDM 381

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-- 206
           +  R +F  ++N  V  W  ++  Y + G   E++ LF+ M + G   +SYT + VL   
Sbjct: 382 ESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVC 441

Query: 207 ----CL------------AVVGNSRRVKD--------------AHKLFDELSDR-DVVSW 235
               CL            +++  S  V +              A ++FD++  R + ++W
Sbjct: 442 ASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITW 501

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFAL 294
             MI     +G  E+ + +F+EML  G   D  T V VLS C++ G +  G R       
Sbjct: 502 TSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKN 561

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           +   + E+S    ++D+                                AR G+F  A  
Sbjct: 562 EHQIAPEMSHYACMVDL-------------------------------LARAGLFSEAQE 590

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
             R   R  +EPD  A  S+L AC      E+ +   + +   D  +S   S A+ ++Y+
Sbjct: 591 FIR---RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYS-AIANVYS 646

Query: 415 KCGSMADAESVFNQMPVKDI-----VSWNTMIGALDLFVA 449
            CG  +DA  ++     K +      SW  +   + +F A
Sbjct: 647 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGA 686


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 274/781 (35%), Positives = 436/781 (55%), Gaps = 44/781 (5%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T+ S+L+ C+  + L  G+KVH +   +G    DG + + LV M+  CG L + R
Sbjct: 79  KCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFE-SDGFVANTLVVMYAKCGLLDDSR 137

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--- 209
           R+F  I    V  WN L   Y ++    E++ LFK+M   GI  + ++ S +L   A   
Sbjct: 138 RLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQ 197

Query: 210 -----------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                        +   +  ++ A  +F +++  DVVSWN +I+
Sbjct: 198 EGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIA 257

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G + +   +  L +  EM   G   ++ T+ + L  CA  G    GR +H+  +K     
Sbjct: 258 GCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHS 317

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++     L+DMYSKC  +D A R ++ M ++ +++W ++I+GY++ G    A+ LF  M 
Sbjct: 318 DLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMF 377

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
            E I+ +   ++++L + A    +++ K +H    ++ + S  YV N+L+D Y KC  + 
Sbjct: 378 SEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHID 437

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACA 469
           +A  +F +   +D+V++ +MI           AL L++ M   + +PD    + +L ACA
Sbjct: 438 EASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACA 497

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           +L+A E+G+++H + ++ G   D   +N++V+MY KCG +  A   F  IP + ++SW+ 
Sbjct: 498 NLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSA 557

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           MI GY  HG G +A+  FN M + G+ P+ ++ +SVL AC+H+GLV+EG ++F  M    
Sbjct: 558 MIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMF 617

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            I+P  EHYACM+DLL R+G L+EA   +  +P   D  +WG+LL   RIH  ++L +K 
Sbjct: 618 GIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKA 677

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           A+ +F+LEP+ +G +VLLAN+YA A  WE V K+R+ +    +KK PG SWIEIK KV  
Sbjct: 678 AKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYT 737

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F+ G  SH  + +I + L +L   + + GY       + N D+ EKE  L  HSEKLA+A
Sbjct: 738 FIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVA 797

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           FG++  P G  IRV KNLR+C DCH   KF+ K   REI++RD NRFHHFKDG CSC  +
Sbjct: 798 FGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDY 857

Query: 830 W 830
           W
Sbjct: 858 W 858



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 186/628 (29%), Positives = 296/628 (47%), Gaps = 108/628 (17%)

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           RR   A KL DE S+ DVVSW+ ++SGY+ NG  E+ L VF EM  LG   +  T  +VL
Sbjct: 30  RRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVL 89

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             C+    L  GR VH  A+   F  +    NTL+ MY+KCG LD + R+F  + ER+VV
Sbjct: 90  KACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVV 149

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE--IGKDVHD 392
           SW ++ + Y +  +   A+ LF+ MVR GI P+ ++I+ IL+ACA  GL E  +G+ +H 
Sbjct: 150 SWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACA--GLQEGDLGRKIHG 207

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL------DL 446
            + +  +    + +NAL+DMY+K G +  A +VF  +   D+VSWN +I         DL
Sbjct: 208 LMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDL 267

Query: 447 FVAMLQNFE-----PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
            + +L   +     P+  T++  L ACA++   E GR++H  +++    +D   A  +VD
Sbjct: 268 ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVD 327

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KC ++  AR  +D +P KD+I+W  +I+GY   G   DA++ F+ M    I+ ++ +
Sbjct: 328 MYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTT 387

Query: 562 FISVLYA--------------------------------------CSHSGLVDEGWRFFN 583
             +VL +                                      C+H   +DE  + F 
Sbjct: 388 LSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNH---IDEASKIFE 444

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP---VAPDATIWGSLLCGCRIH 640
              +E      L  Y  M+   S+ G+  EA +    M    + PD  I  SLL  C   
Sbjct: 445 ERTWE-----DLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANL 499

Query: 641 HEVKLAEKVAEHVF------ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
              +  +++  H        ++   N+     L N+YA+    E+  +   +I  RG+  
Sbjct: 500 SAYEQGKQLHVHAIKFGFMCDIFASNS-----LVNMYAKCGSIEDADRAFSEIPNRGI-- 552

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
               SW       +  + G + H H K  E+L  RL  +M R+G  P     L++     
Sbjct: 553 ---VSW-------SAMIGGYAQHGHGK--EAL--RLFNQMLRDG-VPPNHITLVSV---- 593

Query: 755 KEVALCGHS----------EKLAMAFGI 772
             +  C H+          EK+ + FGI
Sbjct: 594 --LCACNHAGLVNEGKQYFEKMEVMFGI 619



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 159/568 (27%), Positives = 282/568 (49%), Gaps = 57/568 (10%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D  L + LV ++  C      R++ ++     V  W+ L+  Y + G  +E+L +F +M 
Sbjct: 15  DPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMC 74

Query: 191 SLGIAADSYTFSCVLKCLAV------------------------VGNSRRV--------K 218
            LG+  + +TF  VLK  ++                        V N+  V         
Sbjct: 75  LLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLD 134

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           D+ +LF  + +R+VVSWN + S Y+ + +  + + +FKEM+  G   +  ++  +L+ CA
Sbjct: 135 DSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACA 194

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
                  GR +H   LK     +    N L+DMYSK G+++GA+ VF+ +    VVSW +
Sbjct: 195 GLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNA 254

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +IAG       D A+ L   M   G  P+++ ++S L ACA  G  E+G+ +H  + + D
Sbjct: 255 IIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMD 314

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFV 448
             S L+ +  L+DMY+KC  M DA   ++ MP KDI++WN +I           A+ LF 
Sbjct: 315 AHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFS 374

Query: 449 AML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            M  ++ + +  T++ +L + ASL A++  ++IH   ++ GI +D  V N+++D Y KC 
Sbjct: 375 KMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCN 434

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            +  A  +F+    +DL+++T MI  Y  +G G +A+  +  M+ A I+PD     S+L 
Sbjct: 435 HIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLN 494

Query: 568 ACSHSGLVDEGWRF------FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           AC++    ++G +       F  M   C+I         +V++ ++ G++ +A R    +
Sbjct: 495 ACANLSAYEQGKQLHVHAIKFGFM---CDIFAS----NSLVNMYAKCGSIEDADRAFSEI 547

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKV 649
           P     + W +++ G   H   K A ++
Sbjct: 548 PNRGIVS-WSAMIGGYAQHGHGKEALRL 574



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 192/359 (53%), Gaps = 13/359 (3%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +HA  +K  FS++ S  N L+ +YSKC     A ++ ++  E  VVSW+S+++GY + G 
Sbjct: 3   LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
            + A+ +F  M   G++ + +   S+L AC+    L +G+ VH        +S  +V+N 
Sbjct: 63  VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPD 457
           L+ MYAKCG + D+  +F  +  +++VSWN +            A+ LF  M+++   P+
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
             +++ IL ACA L   + GR+IHG +L+ G+  D+  ANA+VDMY K G +  A ++F 
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            I   D++SW  +IAG  +H     A+   ++M+ +G  P+  +  S L AC+  G  + 
Sbjct: 243 DIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKEL 302

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           G +  + +  + +    L     +VD+ S+   + +A R  + MP   D   W +L+ G
Sbjct: 303 GRQLHSSL-IKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWNALISG 359



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 35/256 (13%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  + + G+   A+ +     SE    +  T  ++L+  A L++++  K++H+I  
Sbjct: 353 WNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISI 412

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +SGI  D  V+ S L+  +  C  + E  ++F +     +  +  ++  YS+ G+ +E+L
Sbjct: 413 KSGIYSDFYVINS-LLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEAL 471

Query: 184 YLFKKMQSLGIAADSYTFSCVLK------------------------CLAVVGNSR---- 215
            L+ +MQ   I  D +  S +L                         C     NS     
Sbjct: 472 KLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMY 531

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                ++DA + F E+ +R +VSW+ MI GY  +G  ++ L +F +ML  G   +  T+V
Sbjct: 532 AKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLV 591

Query: 272 TVLSGCANCGALMFGR 287
           +VL  C + G +  G+
Sbjct: 592 SVLCACNHAGLVNEGK 607



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%)

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           E+H ++++ G S D ++ N +V +Y KC     AR L D     D++SW+ +++GY  +G
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           F  +A+  FN+M   G++ +E +F SVL ACS    ++ G +   M
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGM 107


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 268/642 (41%), Positives = 400/642 (62%), Gaps = 32/642 (4%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG----LEVFKEMLNLGFNVDLATMVT 272
           + DA  +F  +  RD+V+WN M++GY  +G+        L +  +M  L  N   +T+V 
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNA--STLVA 118

Query: 273 VLSGCANCGALMFGRAVHAFALKACF----------SKEISFNNTLLDMYSKCGDLDGAI 322
           +L   A  GAL  G +VHA+ ++AC           +  +     LLDMY+KCG L  A 
Sbjct: 119 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 178

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI---EPDVYAITSILHACA 379
           RVF+ M  R+ V+W+++I G+        A  LF+ M+ +G+    P   +I S L ACA
Sbjct: 179 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACA 236

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               L +G+ +H  + ++ + + L   N+L+ MYAK G +  A ++F++M VKD VS++ 
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296

Query: 440 MIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           ++           A  +F  M   N EPD  TM  ++PAC+ LAAL+ GR  HG ++  G
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
           ++++ ++ NA++DMY KCG + L+R +F+M+P++D++SW  MIAGYG+HG G +A A F 
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
           +M   G  PD V+FI +L ACSHSGLV EG  +F++M +   + P++EHY CMVDLLSR 
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 476

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           G L EAY FI+ MP+  D  +W +LL  CR++  + L +KV+  + EL P+ TG +VLL+
Sbjct: 477 GFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLS 536

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           N+Y+ A +++E  ++R     +G KK+PGCSWIEI G ++ FV G  SHP + +I   L 
Sbjct: 537 NIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELD 596

Query: 729 RLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLR 788
            + + +K+ GY P T + L + +E EKE AL  HSEKLA+A+GIL+L   +TI VTKNLR
Sbjct: 597 NILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLR 656

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           VCGDCH + K +S   RR I++RD+NRFHHFK+G+CSC  FW
Sbjct: 657 VCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 209/450 (46%), Gaps = 47/450 (10%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T    L  C+       GRA+H  A+ A    ++  +  LLDMY KC  L  A  +F  M
Sbjct: 12  TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 71

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIR--LFRGMVREGIEPDVYAITSILHACACDGLLEI 386
             R +V+W +M+AGYA  G++  A+   L   M    + P+   + ++L   A  G L  
Sbjct: 72  PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 131

Query: 387 GKDVHDYI----------KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
           G  VH Y            ++ +   + +  AL+DMYAKCGS+  A  VF+ MP ++ V+
Sbjct: 132 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 191

Query: 437 WNTMIG----------ALDLFVAMLQN----FEPDGVTMACILPACASLAALERGREIHG 482
           W+ +IG          A  LF AML        P  +  A  L ACASL  L  G ++H 
Sbjct: 192 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA--LRACASLDHLRMGEQLHA 249

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
            + + G+ AD    N+++ MY K G++  A +LFD +  KD +S++ +++GY  +G   +
Sbjct: 250 LLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEE 309

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSH-----SGLVDEGWRFFNMMRYECNIEPKLEH 597
           A   F  M+   +EPD  + +S++ ACSH      G    G      +  E +I   L  
Sbjct: 310 AFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNAL-- 367

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL- 656
               +D+ ++ G +  + +   MMP + D   W +++ G  IH   K A  +   +  L 
Sbjct: 368 ----IDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422

Query: 657 -EPDNTGYYVLL-----ANVYAEAEKWEEV 680
             PD   +  LL     + +  E + W  V
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHV 452



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 210/476 (44%), Gaps = 66/476 (13%)

Query: 46  CTINPISASISKTLVCK-TKNYNAEIGRFCEVGNLEKAMEVLYSSE----KSKIDTKTYC 100
           C   P +A I  T+  +    +NA +  +   G    A+  L S +    + + +  T  
Sbjct: 58  CACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLV 117

Query: 101 SILQLCADLKSLEDGKKVHSIICESGI--------VIDDGVL-GSKLVFMFVTCGDLKEG 151
           ++L L A   +L  G  VH+    + +         + DGVL G+ L+ M+  CG L   
Sbjct: 118 ALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 177

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT-FSCVLKCLAV 210
           RRVF+ +       W+ L+  +       ++  LFK M + G+   S T  +  L+  A 
Sbjct: 178 RRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACAS 237

Query: 211 VGNSRRVKDAH--------------------------------KLFDELSDRDVVSWNCM 238
           + + R  +  H                                 LFDE++ +D VS++ +
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 297

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           +SGY+ NG AE+   VFK+M       D ATMV+++  C++  AL  GR  H   +    
Sbjct: 298 VSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL 357

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
           + E S  N L+DMY+KCG +D + +VF  M  R +VSW +MIAGY   G+   A  LF  
Sbjct: 358 ASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLE 417

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDV-----HDYIKENDMQSSLYVSNALMDMY 413
           M   G  PD      +L AC+  GL+  GK       H Y     M+  +     ++D+ 
Sbjct: 418 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI----CMVDLL 473

Query: 414 AKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLF---------VAMLQNFEPDGV 459
           ++ G + +A      MP++ D+  W  ++GA  ++           M+Q   P+G 
Sbjct: 474 SRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGT 529



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 188/448 (41%), Gaps = 88/448 (19%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M+R  + P+ Y     L AC+       G+ +H +     +Q+ L+VS AL+DMY KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM---LQNFEPDGVTMACIL 465
           + DA  +F  MP +D+V+WN M+           A+   ++M   +    P+  T+  +L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 466 PACASLAALERGREIHGYILRHGISADRN----------VANAIVDMYVKCGVLVLARSL 515
           P  A   AL +G  +H Y +R  +  +RN          +  A++DMY KCG L+ AR +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 516 FDMIPAKDLISWTIMIAGYGM-----HGF---------------------GCDAIATFND 549
           FD +PA++ ++W+ +I G+ +       F                        A A+ + 
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 550 MR----------QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
           +R          ++G+  D  +  S+L   + +GL+D+    F+ M  +  +      Y+
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS-----YS 295

Query: 600 CMVDLLSRTGNLSEAYRFIEMMP---VAPDATIWGSLLCGCRIHHEVKLAEKVAEH---V 653
            +V    + G   EA+   + M    V PDA    SL+  C   H   L      H   +
Sbjct: 296 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACS--HLAALQHGRCSHGSVI 353

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
                  T     L ++YA+  + +  +++   +  R +      SW       N  +AG
Sbjct: 354 IRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDI-----VSW-------NTMIAG 401

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFP 741
              H   K+  +L     LEM   G+ P
Sbjct: 402 YGIHGLGKEATALF----LEMNNLGFPP 425



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 15/274 (5%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
           T +Y+A +  + + G  E+A  V    +   +  D  T  S++  C+ L +L+ G+  H 
Sbjct: 291 TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 350

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            +   G+  +  +  + L+ M+  CG +   R+VFN + +  +  WN ++  Y   G  K
Sbjct: 351 SVIIRGLASETSICNA-LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGK 409

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE---LSDRDVVSWNC 237
           E+  LF +M +LG   D  TF C+L   +  G     K    +      L+ R +  + C
Sbjct: 410 EATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPR-MEHYIC 468

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+      G  ++  E  + M       D+   V +L  C     +  G+ V     +  
Sbjct: 469 MVDLLSRGGFLDEAYEFIQSM---PLRADVRVWVALLGACRVYKNIDLGKKVSRMIQE-- 523

Query: 298 FSKEISFNNTLL-DMYSKCGDLDGA--IRVFEKM 328
              E + N  LL ++YS  G  D A  +R+ +K+
Sbjct: 524 LGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKV 557


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 283/775 (36%), Positives = 423/775 (54%), Gaps = 82/775 (10%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y + L+ C + ++    KK+H  I  + +   +  L + L+  +   GDLK  R VF+ I
Sbjct: 8   YTAALKFCCEARNRAQVKKLHCRIIRT-LTNPETFLYNNLINTYGKLGDLKNARNVFDHI 66

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
               +F WN L+  YSK G      YL                                +
Sbjct: 67  PQPNLFSWNTLLSAYSKLG------YL--------------------------------Q 88

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGC 277
           D  ++FD + + DVVSWN ++SGY  NG+  + + V+  ML  G  N++  T  T+L   
Sbjct: 89  DMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILS 148

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV--- 334
           +N G +  GR +H    K  +   +   + L+DMY+K G ++ A R+FE++ E+++V   
Sbjct: 149 SNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYN 208

Query: 335 ----------------------------SWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
                                       SWT++I G  + G+F  A+  F+ M  EG   
Sbjct: 209 TMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCM 268

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D +   S+L AC     L+ GK +H YI   D Q +++V +AL+DMY KC ++  AE+VF
Sbjct: 269 DQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVF 328

Query: 427 NQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALE 475
            +M  K+++SW  M+           A+ +F  M +N   PD  T+  ++ +CA+LA+LE
Sbjct: 329 RKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLE 388

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
            G + HG  L  G+     V+NA++ +Y KCG L  A  LF  +  +D +SWT +++GY 
Sbjct: 389 EGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYA 448

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
             G   + I+ F  M   GI PD V+F+ VL ACS +GLV++G+ +F  M  E  I P  
Sbjct: 449 QFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIP 508

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           +HY CM+DLLSR G L EA  FI  MP +PDA  W +LL  CR++  +++ +  AE + +
Sbjct: 509 DHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHK 568

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           LEP N   Y+LL+++YA   KW++V KLR+ +   G+KK PG SWI+ K KV+IF A   
Sbjct: 569 LEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDR 628

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
           S P + +I + L+ L L+M  EGY P   + L + ++ EK   L  HSEKLA+AFG+L +
Sbjct: 629 SSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFI 688

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           P G  IRV KNLRVCGDCH   K++S+  +REI++RD+ RFH FKDG CSC  FW
Sbjct: 689 PDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 162/406 (39%), Gaps = 81/406 (19%)

Query: 50  PISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADL 109
           P   SIS T +      N   G F E  +  K M +    E   +D  T+ S+L  C   
Sbjct: 231 PEKDSISWTTIITGLTQN---GLFKEAVDKFKEMGI----EGFCMDQFTFGSVLTACGGF 283

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLL 169
            +L++GK++H+ I  +    D+  +GS L+ M+  C ++K    VF K+ +  V  W  +
Sbjct: 284 LALDEGKQIHAYIIRTDYQ-DNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAM 342

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV------------------------L 205
           +  Y + G  +E++ +F  MQ   I  D +T   V                        L
Sbjct: 343 LVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGL 402

Query: 206 KCLAVVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
            C   V N+          ++ AH+LF E+  RD VSW  ++SGY   G A + + +F+ 
Sbjct: 403 ICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFET 462

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           ML  G   D  T V VLS C+  G  +  +  H F    C  KE      + D Y     
Sbjct: 463 MLAHGIVPDGVTFVGVLSACSRAG--LVEKGYHYF---ECMVKEHRI-TPIPDHY----- 511

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
                              T MI   +R G  + A      M      PD     ++L +
Sbjct: 512 -------------------TCMIDLLSRAGRLEEAKNFINQM---PFSPDAIGWATLLSS 549

Query: 378 CACDGLLEIGK----DVHDYIKEND----MQSSLYVSNALMDMYAK 415
           C  +G LEIGK     +H    +N     + SS+Y +    D  AK
Sbjct: 550 CRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAK 595



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 143/335 (42%), Gaps = 34/335 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A +  + + G  E+A+ +    ++++I  D  T  S++  CA+L SLE+G + H   
Sbjct: 338 SWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQA 397

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG++    V  + L+ ++  CG L+   ++F+++       W  L+  Y++ G   E+
Sbjct: 398 LASGLICFVTV-SNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANET 456

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNC 237
           + LF+ M + GI  D  TF  VL   +  G    V+  +  F+ +     ++     + C
Sbjct: 457 ISLFETMLAHGIVPDGVTFVGVLSACSRAG---LVEKGYHYFECMVKEHRITPIPDHYTC 513

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MI      G  E+      +M    F+ D     T+LS C   G L  G+   A +L   
Sbjct: 514 MIDLLSRAGRLEEAKNFINQM---PFSPDAIGWATLLSSCRLNGNLEIGKWA-AESLHKL 569

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV-----SW------TSMIAGYARE 346
             +  +    L  +Y+  G  D   ++ + M E  V      SW        + +   R 
Sbjct: 570 EPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRS 629

Query: 347 GVFDGAI-----RLFRGMVREGIEPDVYAITSILH 376
             F   I      L+  M+ EG  PD   ++ +LH
Sbjct: 630 SPFSDQIYAKLESLYLKMIEEGYVPD---MSFVLH 661


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 283/816 (34%), Positives = 450/816 (55%), Gaps = 51/816 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            +NA +  +      E AM +   L S  + K D  T   +++ CA L  L  G+ +H +
Sbjct: 67  QWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGM 126

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             +  +V  D  +G+ L+ M+  CG ++E  +VF  +    +  WN ++  +S+ G  +E
Sbjct: 127 ATKMDLV-SDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQE 185

Query: 182 SLYLFKKM--QSLGIAADSYTFSCVLKCLA------------------------VVGNS- 214
           S   F++M         D  T   VL   A                        +V NS 
Sbjct: 186 SFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSL 245

Query: 215 -------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNV 265
                  R + +A  LFD+   +++VSWN MI GY       +   + ++M   +     
Sbjct: 246 IDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKA 305

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T++ VL  C     L   + +H ++ +          N  +  Y++CG L  + RVF
Sbjct: 306 DEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVF 365

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           + M  ++V SW +++ GYA+      A+ L+  M   G++PD + I S+L AC+    L 
Sbjct: 366 DLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLH 425

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
            G+++H +   N +    ++  +L+ +Y  CG    A+ +F+ M  + +VSWN MI    
Sbjct: 426 YGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYS 485

Query: 443 -------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  A++LF  ML +  +P  + + C+  AC+ L+AL  G+E+H + L+  ++ D  
Sbjct: 486 QNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIF 545

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V+++I+DMY K G + L++ +FD +  KD+ SW ++IAGYG+HG G +A+  F  M + G
Sbjct: 546 VSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLG 605

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           ++PD+ +F  +L ACSH+GLV++G  +FN M    NIEPKLEHY C+VD+L R G + +A
Sbjct: 606 LKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDA 665

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
            R IE MP  PD+ IW SLL  CRIH  + L EKVA  + ELEP+    YVL++N++A +
Sbjct: 666 LRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGS 725

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            KW++V+++R ++   GL+K+ GCSWIE+ GKV+ F+ G    P  +++    +RL +++
Sbjct: 726 GKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKI 785

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
              GY P T   L + +E +K   L GHSEKLA++FG+LN   G  +RV KNLR+CGDCH
Sbjct: 786 SSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCH 845

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             AKF+SK   R+IV+RD+ RFHHF+DG CSC  +W
Sbjct: 846 NAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881



 Score =  296 bits (759), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 182/616 (29%), Positives = 322/616 (52%), Gaps = 52/616 (8%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +LQ C   K +E G+++H ++  S    +D VL ++++ M+  CG   + R VF+K+   
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKC------------- 207
            +F WN ++  Y++   F++++ +F ++ S+     D++T  CV+K              
Sbjct: 64  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123

Query: 208 -------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                              +A+ G    V++A K+F+ + +R++VSWN +I G+  NG  
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183

Query: 249 EKGLEVFKEML--NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           ++    F+EML     F  D+AT+VTVL  CA    +  G AVH  A+K   ++E+  NN
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG--I 364
           +L+DMYSKC  L  A  +F+K  ++++VSW SMI GYARE        L + M  E   +
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           + D + I ++L  C     L+  K++H Y   + +QS+  V+NA +  Y +CG++  +E 
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSER 363

Query: 425 VFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAA 473
           VF+ M  K + SWN ++           ALDL++ M  +  +PD  T+  +L AC+ + +
Sbjct: 364 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 423

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           L  G EIHG+ LR+G++ D  +  +++ +Y+ CG    A+ LFD +  + L+SW +MIAG
Sbjct: 424 LHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAG 483

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           Y  +G   +AI  F  M   GI+P E++ + V  ACS    +  G +  +    + ++  
Sbjct: 484 YSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLG-KELHCFALKAHLTE 542

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            +   + ++D+ ++ G +  + R  + +    D   W  ++ G  IH   K A ++ E +
Sbjct: 543 DIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVIIAGYGIHGRGKEALELFEKM 601

Query: 654 FE--LEPDNTGYYVLL 667
               L+PD+  +  +L
Sbjct: 602 LRLGLKPDDFTFTGIL 617



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 192/386 (49%), Gaps = 23/386 (5%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           M  +L  C     +  GR +H     +  F  +   N  ++ MYS CG    +  VF+K+
Sbjct: 1   MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDGLLE-- 385
             +++  W ++++ Y R  +F+ A+ +F  ++     +PD + +  ++ ACA  GLL+  
Sbjct: 61  RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLDLG 118

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---- 441
           +G+ +H    + D+ S ++V NAL+ MY KCG + +A  VF  MP +++VSWN++I    
Sbjct: 119 LGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFS 178

Query: 442 ------GALDLFVAML---QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                  + + F  ML   ++F PD  T+  +LP CA    +E+G  +HG  ++ G++ +
Sbjct: 179 ENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEE 238

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR- 551
             V N+++DMY KC  L  A+ LFD    K+++SW  MI GY      C        M+ 
Sbjct: 239 LMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQT 298

Query: 552 -QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
             A ++ DE + ++VL  C     + +  +  +   +   ++         +   +R G 
Sbjct: 299 EDAKMKADEFTILNVLPVCLERSEL-QSLKELHGYSWRHGLQSNELVANAFIAAYTRCGA 357

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCG 636
           L  + R  ++M     ++ W +LLCG
Sbjct: 358 LCSSERVFDLMDTKTVSS-WNALLCG 382



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 167/344 (48%), Gaps = 28/344 (8%)

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA-LMDMYAKCGSMADAESVFNQMPVK 432
           +L AC     +E+G+ +H+ +  +    + +V N  ++ MY+ CGS +D+  VF+++  K
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 433 DIVSWNTMIGAL---DLFVAMLQNF---------EPDGVTMACILPACASLAALERGREI 480
           ++  WN ++ A    +LF   +  F         +PD  T+ C++ ACA L  L  G+ I
Sbjct: 64  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           HG   +  + +D  V NA++ MY KCG++  A  +F+ +P ++L+SW  +I G+  +GF 
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183

Query: 541 CDAIATFNDMR--QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
            ++   F +M   +    PD  + ++VL  C+    +++G     +   +  +  +L   
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLA-VKLGLNEELMVN 242

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG-------CRIHHEVKLAEKVAE 651
             ++D+ S+   LSEA    +      +   W S++ G       CR  +   L +K+  
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKND-KKNIVSWNSMIGGYAREEDVCRTFY---LLQKMQT 298

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
              +++ D      +L  V  E  + + +K+L     R GL+ N
Sbjct: 299 EDAKMKADEFTILNVLP-VCLERSELQSLKELHGYSWRHGLQSN 341


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 272/781 (34%), Positives = 428/781 (54%), Gaps = 44/781 (5%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +   + S+L+ C   K L  GK+VH I+  +G   D+ V  S LV ++  CG   + R
Sbjct: 7   KCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANS-LVILYAKCGGFGDAR 65

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            +F+ I +  V  WN L   Y  +    E++ LF  M   GI  + ++ S ++     + 
Sbjct: 66  SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLE 125

Query: 213 NSRR--------------------------------VKDAHKLFDELSDRDVVSWNCMIS 240
           +S +                                ++DA  +FDE++  D+VSWN +I+
Sbjct: 126 DSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIA 185

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G + +    + LE+ +EM   G   ++ T+ + L  CA       GR +H+  +K     
Sbjct: 186 GCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGS 245

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           +      L+DMYSKC  +D A  VF+ M ER +++W ++I+G+++    + A  LF  M 
Sbjct: 246 DSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMH 305

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
            EGI  +   ++++L + A      + + +H    ++  +   YV N+L+D Y KCG + 
Sbjct: 306 TEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVE 365

Query: 421 DAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNFEPDGVTMACILPACA 469
           DA  VF + P+ D+V + +++ A          L L++ M  +  +PD    + +L ACA
Sbjct: 366 DATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACA 425

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           SL+A E+G+++H +IL+ G  +D    N++V+MY KCG +  A   F  IP + ++SW+ 
Sbjct: 426 SLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSA 485

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           MI G   HG+G +A+  F  M + G+ P+ ++ +SVL AC+H+GLV E   +FN M+   
Sbjct: 486 MIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILF 545

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            IEP  EHYACM+DLL R G L  A   +  MP   +A +WG+LL   RIH  + L E+ 
Sbjct: 546 GIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQA 605

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           AE +  LEP+ +G +VLLAN+YA    W++V ++R  +    +KK PG SW+E+K KV  
Sbjct: 606 AEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYT 665

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F+ G  SH  + +I + L  L   +K+ GY P     L + +  EKE  L  HSEKLA+A
Sbjct: 666 FIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVA 725

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           FG++  P G  IRV KNLR+C DCH + KF+SK   REI++RD+NRFHHF++G CSC  +
Sbjct: 726 FGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEY 785

Query: 830 W 830
           W
Sbjct: 786 W 786



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 246/522 (47%), Gaps = 71/522 (13%)

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
           LG   +     +VL  C     L+ G+ VH   +   F  +    N+L+ +Y+KCG    
Sbjct: 4   LGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGD 63

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A  +F+ + +RSVVSW ++ + Y    +   A+ LF  MV  GI P+ ++++S+++ C  
Sbjct: 64  ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCT- 122

Query: 381 DGLLEI--GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
            GL +   G+ +H Y+ +    S  + +NAL+DMYAK G + DA SVF+++   DIVSWN
Sbjct: 123 -GLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWN 181

Query: 439 TMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRH 487
            +I           AL+L   M ++   P+  T++  L ACA +A  E GR++H  +++ 
Sbjct: 182 AIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKM 241

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
            + +D  +   ++DMY KC  +  AR +F ++P +D+I+W  +I+G+  +    +A + F
Sbjct: 242 DMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLF 301

Query: 548 NDMRQAGIEPDEVSFISVL---------YACS--HSGLVDEGWRFFNMM----------- 585
             M   GI  ++ +  +VL         Y C   H+  +  G+ F N +           
Sbjct: 302 PLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKC 361

Query: 586 --------RYECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEMMP--VAPDATIWGSLL 634
                    +E +    L  +  +V   ++ G   EA R ++EM    + PD+ +  SLL
Sbjct: 362 GHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLL 421

Query: 635 CGCRIHHEVKLAEKVAEHVF------ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
             C      +  ++V  H+       ++   N+     L N+YA+    E+      +I 
Sbjct: 422 NACASLSAYEQGKQVHVHILKFGFMSDIFAGNS-----LVNMYAKCGSIEDASCAFSRIP 476

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL 730
            RG+      SW       +  + G + H + K+   L K++
Sbjct: 477 VRGI-----VSW-------SAMIGGLAQHGYGKEALQLFKQM 506



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 193/403 (47%), Gaps = 43/403 (10%)

Query: 80  EKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
            +A+E+L    KS +  +  T  S L+ CA +   E G+++HS + +  +   D  LG  
Sbjct: 194 HRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMG-SDSFLGVG 252

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           L+ M+  C  + + R VF  +    +  WN ++  +S+    +E+  LF  M + GI  +
Sbjct: 253 LIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFN 312

Query: 198 SYTFSCVLKCLAVV--------------------------------GNSRRVKDAHKLFD 225
             T S VLK +A +                                G    V+DA ++F+
Sbjct: 313 QTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFE 372

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
           E    D+V +  +++ Y  +G  E+ L ++ EM + G   D     ++L+ CA+  A   
Sbjct: 373 ESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQ 432

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ VH   LK  F  +I   N+L++MY+KCG ++ A   F ++  R +VSW++MI G A+
Sbjct: 433 GKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQ 492

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK----ENDMQS 401
            G    A++LF+ M++ G+ P+   + S+L AC   GL+   K   + +K       MQ 
Sbjct: 493 HGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQE 552

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
                  ++D+  + G +  A  + N+MP + + + W  ++GA
Sbjct: 553 HY---ACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGA 592



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 142/296 (47%), Gaps = 40/296 (13%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L  +E    +  T  ++L+  A L++    +++H++  +SG   D+ V+ S L+  +  C
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNS-LIDTYGKC 361

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G +++  RVF +     + ++  L+  Y++ G  +E+L L+ +MQ  GI  DS+  S +L
Sbjct: 362 GHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLL 421

Query: 206 KCLAVV------------------------GNSR--------RVKDAHKLFDELSDRDVV 233
              A +                        GNS          ++DA   F  +  R +V
Sbjct: 422 NACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIV 481

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF- 292
           SW+ MI G   +G  ++ L++FK+ML +G   +  T+V+VL  C + G  +   A H F 
Sbjct: 482 SWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAG--LVAEAKHYFN 539

Query: 293 ALKACFSKEISFNN--TLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAR 345
           ++K  F  E    +   ++D+  + G L+ A+ +  KM  + + + W +++ G AR
Sbjct: 540 SMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALL-GAAR 594


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 278/821 (33%), Positives = 457/821 (55%), Gaps = 56/821 (6%)

Query: 65  NYNAEIGRFCEV---GNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVH 119
           N N   GR  +    G L KA+  L     + S  D +TY   L+ C   +S + G  VH
Sbjct: 30  NPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVH 89

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI-WNLLMHEYSKTGN 178
             + +S + +D   L S L+ ++  CG  ++   +F  + + +  I W+ ++  ++    
Sbjct: 90  EKLTQSDLQLDSVTLNS-LISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNM 148

Query: 179 FKESLYLFKKMQSLGIAADSYTFS-----CVLKCLAVVGNS------------------- 214
              +L  F  M   G   + Y F+     C       VG+S                   
Sbjct: 149 GFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGC 208

Query: 215 ----------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                       +  A K+F+++ +R+ V+W  MI+  +  G A + +++F EM+  G+ 
Sbjct: 209 GLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYE 268

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC---GDLDGA 321
            D  T+  V+S CAN   L+ G+ +H+ A++   + +      L++MY+KC   G +  A
Sbjct: 269 PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAA 328

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDG-AIRLFRGMVREGIEPDVYAITSILHACAC 380
            ++F+++ + +V SWT+MI GY ++G +D  A+ LFRGM+   + P+ +  +S L ACA 
Sbjct: 329 RKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACAN 388

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              L IG+ V  +  +    S   V+N+L+ MYA+ G + DA   F+ +  K+++S+NT+
Sbjct: 389 LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTV 448

Query: 441 IGA----------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
           I A          L+LF  +  Q       T A +L   AS+  + +G +IH  +++ G+
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL 508

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             +++V NA++ MY +CG +  A  +F+ +  +++ISWT +I G+  HGF   A+  F+ 
Sbjct: 509 KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHK 568

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M + G+ P+ V++I+VL ACSH GLV+EGW+ F  M  E  + P++EHYACMVD+L R+G
Sbjct: 569 MLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSG 628

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
           +LSEA +FI  MP   DA +W + L  CR+H  ++L +  A+ + E EP +   Y+LL+N
Sbjct: 629 SLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSN 688

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           +YA   KW+EV  +R+ +  + L K  GCSW+E++ KV+ F  G +SHP A +I   L+ 
Sbjct: 689 LYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQN 748

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
           L +++K+ GY P   + L + +E +KE  L  HSEK+A+AFG+++    + IRV KNLR+
Sbjct: 749 LSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRI 808

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CGDCH   K++S    REI++RD+NRFHH KDGRCSC  +W
Sbjct: 809 CGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 278/782 (35%), Positives = 436/782 (55%), Gaps = 46/782 (5%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T+ S+L+ C+ +K L  GK+VH ++  SG    D  + + LV M+  C +  + +
Sbjct: 154 KCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE-GDVFVANTLVVMYAKCDEFLDSK 212

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           R+F++I    V  WN L   Y +     E++ LF +M   GI  + ++ S ++     + 
Sbjct: 213 RLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLR 272

Query: 213 NSRRVK--------------------------------DAHKLFDELSDRDVVSWNCMIS 240
           +S R K                                DA  +F+++   D+VSWN +I+
Sbjct: 273 DSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIA 332

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G + +   E+ LE+  +M   G   ++ T+ + L  CA  G    GR +H+  +K     
Sbjct: 333 GCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMES 392

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++  +  L+DMYSKC  L+ A   F  + E+ +++W ++I+GY++      A+ LF  M 
Sbjct: 393 DLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH 452

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           +EGI  +   +++IL + A   ++ + + VH    ++   S +YV N+L+D Y KC  + 
Sbjct: 453 KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVE 512

Query: 421 DAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQNFE--PDGVTMACILPAC 468
           DAE +F +  + D+VS+ +MI A          L LF+ M Q+ E  PD    + +L AC
Sbjct: 513 DAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEM-QDMELKPDRFVCSSLLNAC 571

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A+L+A E+G+++H +IL++G   D    N++V+MY KCG +  A   F  +  + ++SW+
Sbjct: 572 ANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWS 631

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI G   HG G  A+  FN M + G+ P+ ++ +SVL AC+H+GLV E   +F  M   
Sbjct: 632 AMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEEL 691

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
              +P  EHYACM+DLL R G ++EA   +  MP   +A++WG+LL   RIH +V+L  +
Sbjct: 692 FGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRR 751

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            AE +F LEP+ +G +VLLAN+YA A KWE V ++R  +    +KK PG SWIE+K KV 
Sbjct: 752 AAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVY 811

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            F+ G  SH  +++I + L  L   M + GY P     L + ++ EKE+ L  HSEKLA+
Sbjct: 812 TFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAV 871

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           AFG++  P G  IRV KNLRVC DCH   K++ K   REI++RD NRFHHFKDG CSC  
Sbjct: 872 AFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGD 931

Query: 829 FW 830
           +W
Sbjct: 932 YW 933



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 183/669 (27%), Positives = 324/669 (48%), Gaps = 81/669 (12%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           +Y  +L  C   KSL  G ++H+ I +SG+  DD  + + L+ ++  C +    R++ ++
Sbjct: 58  SYSKLLSQCCTTKSLRPGLQIHAHITKSGLS-DDPSIRNHLINLYSKCRNFGYARKLVDE 116

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
                +  W+ L+  Y++ G    +L  F +M  LG+  + +TFS VLK  ++V + R  
Sbjct: 117 SSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIG 176

Query: 218 KDAH--------------------------------KLFDELSDRDVVSWNCMISGYIAN 245
           K  H                                +LFDE+ +R+VVSWN + S Y+  
Sbjct: 177 KQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQI 236

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
               + + +F EM+  G   +  ++ ++++ C        G+ +H + +K  +  +    
Sbjct: 237 DFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSA 296

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N L+DMY+K GDL  AI VFEK+ +  +VSW ++IAG       + A+ L   M R GI 
Sbjct: 297 NALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGIC 356

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P+++ ++S L ACA  GL E+G+ +H  + + DM+S L+VS  L+DMY+KC  + DA   
Sbjct: 357 PNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMA 416

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAAL 474
           FN +P KD+++WN +I           AL LFV M  +    +  T++ IL + A L  +
Sbjct: 417 FNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVV 476

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
              R++HG  ++ G  +D  V N+++D Y KC  +  A  +F+     DL+S+T MI  Y
Sbjct: 477 HVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAY 536

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF-FNMMRY------ 587
             +G G +A+  F +M+   ++PD     S+L AC++    ++G +   ++++Y      
Sbjct: 537 AQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDI 596

Query: 588 -----------ECN------------IEPKLEHYACMVDLLSRTGNLSEAYRFIEMM--- 621
                      +C              E  +  ++ M+  L++ G+  +A +    M   
Sbjct: 597 FAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKE 656

Query: 622 PVAPDATIWGSLLCGCR---IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
            V+P+     S+L  C    +  E KL  +  E +F  +P    +Y  + ++   A K  
Sbjct: 657 GVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQE-HYACMIDLLGRAGKIN 715

Query: 679 EVKKLREKI 687
           E  +L  K+
Sbjct: 716 EAVELVNKM 724



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 179/650 (27%), Positives = 306/650 (47%), Gaps = 94/650 (14%)

Query: 154 VFNKIDNGKV----FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
           + N ID G        ++ L+ +   T + +  L +   +   G++ D    S     + 
Sbjct: 43  ILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDP---SIRNHLIN 99

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           +    R    A KL DE S+ D+VSW+ +ISGY  NG+    L  F EM  LG   +  T
Sbjct: 100 LYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFT 159

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
             +VL  C+    L  G+ VH   + + F  ++   NTL+ MY+KC +   + R+F+++ 
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ER+VVSW ++ + Y +      A+ LF  MV  GI+P+ ++++S+++AC        GK 
Sbjct: 220 ERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKI 279

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H Y+ +       + +NAL+DMYAK G +ADA SVF ++   DIVSWN +I        
Sbjct: 280 IHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEH 339

Query: 443 ---ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              AL+L   M ++   P+  T++  L ACA +   E GR++H  +++  + +D  V+  
Sbjct: 340 HEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG 399

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +VDMY KC +L  AR  F+++P KDLI+W  +I+GY  +    +A++ F +M + GI  +
Sbjct: 400 LVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFN 459

Query: 559 EVSFISVLYA--------------------------------------CSHSGLVDEGWR 580
           + +  ++L +                                      CSH   V++  R
Sbjct: 460 QTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH---VEDAER 516

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEM--MPVAPDATIWGSLLCGC 637
            F     EC I   L  +  M+   ++ G   EA + F+EM  M + PD  +  SLL  C
Sbjct: 517 IFE----ECTI-GDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC 571

Query: 638 RIHHEVKLAEKVAEH------VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
                 +  +++  H      V ++   N+     L N+YA+    ++  +   +++ RG
Sbjct: 572 ANLSAFEQGKQLHVHILKYGFVLDIFAGNS-----LVNMYAKCGSIDDAGRAFSELTERG 626

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           +      SW       +  + G + H H ++   L      +M +EG  P
Sbjct: 627 I-----VSW-------SAMIGGLAQHGHGRQALQLFN----QMLKEGVSP 660



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 214/449 (47%), Gaps = 46/449 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSII 122
           ++NA    + ++    +A+ + Y    S I    +   S++  C  L+    GK +H  +
Sbjct: 225 SWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYL 284

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   D     + LV M+   GDL +   VF KI    +  WN ++       + +++
Sbjct: 285 IKLGYDWDP-FSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQA 343

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG------------------------------ 212
           L L  +M+  GI  + +T S  LK  A +G                              
Sbjct: 344 LELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDM 403

Query: 213 --NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 ++DA   F+ L ++D+++WN +ISGY       + L +F EM   G   +  T+
Sbjct: 404 YSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTL 463

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            T+L   A    +   R VH  ++K+ F  +I   N+L+D Y KC  ++ A R+FE+   
Sbjct: 464 STILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI 523

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
             +VS+TSMI  YA+ G  + A++LF  M    ++PD +  +S+L+ACA     E GK +
Sbjct: 524 GDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQL 583

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H +I +      ++  N+L++MYAKCGS+ DA   F+++  + IVSW+ MIG        
Sbjct: 584 HVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHG 643

Query: 443 --ALDLFVAML-QNFEPDGVTMACILPAC 468
             AL LF  ML +   P+ +T+  +L AC
Sbjct: 644 RQALQLFNQMLKEGVSPNHITLVSVLGAC 672



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 201/407 (49%), Gaps = 51/407 (12%)

Query: 80  EKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC----ESGIVIDDGV 133
           E+A+E+L   ++S I  +  T  S L+ CA +   E G+++HS +     ES + +  G 
Sbjct: 341 EQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG- 399

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
               LV M+  C  L++ R  FN +    +  WN ++  YS+     E+L LF +M   G
Sbjct: 400 ----LVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 455

Query: 194 IAADSYTFSCVLKC---LAVV-----------------------------GNSRRVKDAH 221
           I  +  T S +LK    L VV                             G    V+DA 
Sbjct: 456 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAE 515

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           ++F+E +  D+VS+  MI+ Y   G  E+ L++F EM ++    D     ++L+ CAN  
Sbjct: 516 RIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 575

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
           A   G+ +H   LK  F  +I   N+L++MY+KCG +D A R F ++ ER +VSW++MI 
Sbjct: 576 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 635

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE----N 397
           G A+ G    A++LF  M++EG+ P+   + S+L AC   GL+   K   + ++E     
Sbjct: 636 GLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFK 695

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            MQ        ++D+  + G + +A  + N+MP +   S W  ++GA
Sbjct: 696 PMQEHY---ACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 739


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 268/777 (34%), Positives = 440/777 (56%), Gaps = 46/777 (5%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  + L+ C+   +L+ GK++H+   + G+++D  V GS LV ++  CG+++   ++F  
Sbjct: 215 TLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV-GSALVDLYAKCGEIELASKMFIG 273

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +       WN+L++ Y++ G+    L LF  M  L +  + +T + VLK  A   N ++ 
Sbjct: 274 MPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG 333

Query: 218 KDAHKL--------------------------------FDELSDRDVVSWNCMISGYIAN 245
           +  H L                                F  +   D+V W+ +I+     
Sbjct: 334 QVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQ 393

Query: 246 GVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           G +E+ +++F  ++ LG  + +  T+ ++LS   N G L +G+++HA   K  F  +++ 
Sbjct: 394 GQSEESIKLF-HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAV 452

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
           +N L+ MY K G +    +++E M +R ++SW + ++G    G++D  + +F  M+ EG 
Sbjct: 453 SNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGF 512

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
            P++Y   SIL +C+C   +  G+ VH +I +N +  + +V  AL+DMYAKC  + DA+ 
Sbjct: 513 IPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADV 572

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAA 473
            FN++ V+D+ +W  +I           AL+ F  M Q   +P+  T+A  L  C+SLA+
Sbjct: 573 AFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLAS 632

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           LE G+++H  + + G  +D  V +A+VDMY KCG +  A +LF+ +  +D I+W  +I G
Sbjct: 633 LEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICG 692

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           Y  +G G  A+  F  M   GI PD V+F  +L ACSH GLV+EG   FN M  +  I P
Sbjct: 693 YAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISP 752

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            ++H ACMVD+L R G   E   FI+ M ++ +A IW ++L   ++H+ + L EK A  +
Sbjct: 753 TVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKL 812

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
           FEL+P+    Y+LL+N++A   +W++VK++R  +S +G+KK PGCSW+E  G+V+ FV+ 
Sbjct: 813 FELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSH 872

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
             SHP  ++I   L  L  E+    Y PKT Y L N  E EK+  L  HSE+LA+ F ++
Sbjct: 873 DYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALI 932

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +  + + IR+ KNLR+C DCH++ K +S    +EIV+RD  RFHHFK+G CSC  FW
Sbjct: 933 STSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 182/671 (27%), Positives = 312/671 (46%), Gaps = 60/671 (8%)

Query: 9   TTNFLFFSPPNQSYGKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNA 68
           TT FLFF     S+  +     PS    I  SK    C    +             N+  
Sbjct: 39  TTRFLFFPIRRSSFKVQLDPRCPSDSIGISMSKGQFGCEFKNV-----------VHNFPY 87

Query: 69  EIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIV 128
                 +     K  +V +SS+K     K Y S+L+ CA  +SL   K +H +I +  ++
Sbjct: 88  RFNFEHQKTEDAKGNQVCWSSKKK---LKYYSSMLRECASKRSLGVAKAIHGLIVKD-VI 143

Query: 129 IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
             D  L   LV ++  C      R V  K+ +  V  W  L+      G   +S+YLF++
Sbjct: 144 NPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203

Query: 189 MQSLGIAADSYTFSCVLK----CLAV--------------------VGNSR--------R 216
           MQ+ GI  + +T +  LK    C+A+                    VG++          
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++ A K+F  + +++ V+WN +++GY   G     L++F  M+ L    +  T+ TVL G
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CAN   L  G+ +H+  +K  +         L+DMYSKCG    AI VF+ + +  +V W
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           +++I    ++G  + +I+LF  M      P+ Y I S+L A    G L+ G+ +H  + +
Sbjct: 384 SALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK 443

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDL 446
              ++ + VSNAL+ MY K G + D   ++  M  +D++SWN  +            L +
Sbjct: 444 YGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTI 503

Query: 447 FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  ML+  F P+  T   IL +C+ L  +  GR++H +I+++ +  +  V  A++DMY K
Sbjct: 504 FYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAK 563

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           C  L  A   F+ +  +DL +WT++I  Y     G  A+  F  M+Q G++P+E +    
Sbjct: 564 CMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGC 623

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L  CS    ++ G +  +M+    ++       A +VD+ ++ G + EA    E + +  
Sbjct: 624 LSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSA-LVDMYAKCGCMEEAEALFEAL-IRR 681

Query: 626 DATIWGSLLCG 636
           D   W +++CG
Sbjct: 682 DTIAWNTIICG 692



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 236/490 (48%), Gaps = 46/490 (9%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T  ++L+ CA+ K+L+ G+ +HS+I + G   ++  +G  LV M+  CG   +  
Sbjct: 311 KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNE-FIGCGLVDMYSKCGLAIDAI 369

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            VF  I    + +W+ L+    + G  +ES+ LF  M+      + YT   +L      G
Sbjct: 370 GVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTG 429

Query: 213 NSRR--------------------------------VKDAHKLFDELSDRDVVSWNCMIS 240
           N +                                 V D  KL++ + DRD++SWN  +S
Sbjct: 430 NLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLS 489

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G    G+ ++ L +F  ML  GF  ++ T +++L  C+    + +GR VHA  +K     
Sbjct: 490 GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDD 549

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                  L+DMY+KC  L+ A   F ++  R + +WT +I  YA+    + A+  FR M 
Sbjct: 550 NNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQ 609

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           +EG++P+ + +   L  C+    LE G+ +H  + ++   S ++V +AL+DMYAKCG M 
Sbjct: 610 QEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCME 669

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVTMACILPACA 469
           +AE++F  +  +D ++WNT+I           AL  F  ML +   PDGVT   IL AC+
Sbjct: 670 EAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACS 729

Query: 470 SLAALERGREIHGYILRH-GISADRNVANAIVDMYVKCGVL-VLARSLFDMIPAKDLISW 527
               +E G+E    + R  GIS   +    +VD+  + G    L   +  M  +++ + W
Sbjct: 730 HQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIW 789

Query: 528 TIMIAGYGMH 537
             ++    MH
Sbjct: 790 ETVLGASKMH 799


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 281/800 (35%), Positives = 443/800 (55%), Gaps = 48/800 (6%)

Query: 77  GNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGS 136
           G++ K    L S    + D  T+ S+++ C  +  +  G+ +H ++ + G+V+D  V G+
Sbjct: 127 GDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFV-GN 185

Query: 137 KLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIA 195
            LV M+  CG + E  +VF+ +    +  WN ++  +S+ G  ++S  L  +M    G+ 
Sbjct: 186 ALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLL 245

Query: 196 ADSYTFSCVLKC---------------LAV-VGNSRRV----------------KDAHKL 223
            D  T   +L                 LAV +G S  V                 +A   
Sbjct: 246 PDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMS 305

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG--FNVDLATMVTVLSGCANCG 281
           F + ++++VVSWN MIS +   G   +   + +EM   G     +  T++ VL  C +  
Sbjct: 306 FVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKL 365

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            L   + +H ++ + CF + +  +N  +  Y+KCG L+ A +VF  +G+++V SW ++I 
Sbjct: 366 QLRSLKELHGYSFRHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIG 424

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           G+A+ G    A+ L   M   G +PD + I+S+L ACA    L+ GK++H Y+  N +++
Sbjct: 425 GHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLET 484

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
             +V  +L+  Y  CG  + A  +F++M  K++VSWN MI           +L LF   L
Sbjct: 485 DFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSL 544

Query: 452 -QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
            +  +   + +  +  AC+ L+AL  G+E HGY+L+   + D  V  +I+DMY K G + 
Sbjct: 545 SEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIK 604

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            +R +FD +  K++ SW  +I  +G+HG G +AI  +  M++ G  PD  ++I +L AC 
Sbjct: 605 ESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACG 664

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
           H+GLV+EG ++F  M+    IEPKLEHYAC++D+L+R G L +A R +  MP   D  IW
Sbjct: 665 HAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIW 724

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
            SLL  CR    +++ EKVA+ + ELEPD    YVLL+N+YA   KW+ V+++R+ +   
Sbjct: 725 SSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEI 784

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           GL+K+ GCSWIE+ G+V  FV G S  P + +I  + +RL   +   GY P T   L   
Sbjct: 785 GLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEV 844

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
            E EK   L GHSEKLA++FG+L    G T+R+ KNLR+C DCH  AK +SK   REIV+
Sbjct: 845 GEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVV 904

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RD+ RFHHF+DG CSC  +W
Sbjct: 905 RDNKRFHHFRDGLCSCCDYW 924



 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 191/654 (29%), Positives = 322/654 (49%), Gaps = 59/654 (9%)

Query: 69  EIGRFCEVGNLEKAMEVLYSSEKS----KIDTKTYCSIL-QLCADLKSLEDGKKVHSIIC 123
           EI   CE  NL  A+ ++ S  ++     +  K    +L Q C + K +E G+++H  + 
Sbjct: 11  EIAALCETDNLTTALILIQSHSQNAAFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVS 70

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +S    +D VL ++L+ M+  CG   + R VF+ ++   +  WN L+  Y++ G + + +
Sbjct: 71  DSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVV 130

Query: 184 YLFKKMQS-LGIAADSYTFSCVLKC--------------------------------LAV 210
            +F  + S      D++TF  V+K                                 + +
Sbjct: 131 KVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGM 190

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLAT 269
            G    V +A K+FD + + ++VSWN MI  +  NG +    ++  EML   G   D+ T
Sbjct: 191 YGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVT 250

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +VT+L  CA  G +  G  +H  A+K   S+E+  NN ++ MYSKCG L+ A   F K  
Sbjct: 251 VVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNN 310

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT--SILHACACDGLLEIG 387
            ++VVSW +MI+ ++ EG  + A  L + M  +G E     +T  ++L AC     L   
Sbjct: 311 NKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSL 370

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
           K++H Y   +  Q  + +SNA +  YAKCG++  AE VF+ +  K + SWN +IG     
Sbjct: 371 KELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQN 429

Query: 443 -----ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL L   M     +PD  T++ +L ACA L +L+ G+EIHGY+LR+G+  D  V 
Sbjct: 430 GDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVG 489

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
            +++  Y+ CG    AR LFD +  K+L+SW  MI+GY  +G   +++A F      GI+
Sbjct: 490 TSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQ 549

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC-MVDLLSRTGNLSEAY 615
             E++ +SV  ACS    +  G      +      E       C ++D+ +++G + E+ 
Sbjct: 550 SHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAF--VGCSIIDMYAKSGCIKESR 607

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE--PDNTGYYVLL 667
           +  + +     A+ W +++    IH   K A ++ E + ++   PD   Y  +L
Sbjct: 608 KVFDGLKDKNVAS-WNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGIL 660



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 20/280 (7%)

Query: 62  KTKN---YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGK 116
           K KN   +NA I  + + G   +++ +   S    I +      S+   C+ L +L  GK
Sbjct: 513 KDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGK 572

Query: 117 KVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
           + H  + ++ +  +D  +G  ++ M+   G +KE R+VF+ + +  V  WN ++  +   
Sbjct: 573 EAHGYVLKA-LQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIH 631

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-- 234
           G+ KE++ L+++M+ +G   D +T+   +  L   G++  V++  K F E+ + +++   
Sbjct: 632 GHGKEAIELYERMKKVGQMPDRFTY---IGILMACGHAGLVEEGLKYFKEMQNFNLIEPK 688

Query: 235 ---WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
              + C+I      G  +  L +  EM       D     ++L  C   GAL  G  V  
Sbjct: 689 LEHYACLIDMLARAGRLDDALRLVNEMPE---EADNRIWSSLLRSCRTFGALEIGEKVAK 745

Query: 292 FALKACFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGE 330
             L+     + + N  LL ++Y+  G  DG  RV + M E
Sbjct: 746 KLLE--LEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKE 783


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/622 (41%), Positives = 370/622 (59%), Gaps = 14/622 (2%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +F+++ +    + N +I GY    +  + +  ++ M+  G + D  T  ++     +
Sbjct: 93  ARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFK---S 149

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
           CG L  G+ +H  + K  F+ +    NTL++MYS CG L  A +VF+KM  +SVVSW +M
Sbjct: 150 CGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATM 209

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I  YA+  +   AI+LFR M    ++P+   + ++L ACA    LE  K VH YI E  +
Sbjct: 210 IGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGI 269

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
                +++ALMD+Y KCG    A  +FN+MP K++  WN MI           AL LF  
Sbjct: 270 GFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNE 329

Query: 450 M-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M L   + D VTMA +L AC  L ALE G+ +H YI +  I  D  +  A+VDMY KCG 
Sbjct: 330 MQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGS 389

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +  A  +F  +P KD+++WT +I G  M G G  A+  F++M+ + ++PD ++F+ VL A
Sbjct: 390 IESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 449

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSH+GLV+EG  +FN M  +  I+P +EHY CMVD+L R G ++EA   I+ MP+APD  
Sbjct: 450 CSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYF 509

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           +   LL  CRIH  + +AE+ A+ + EL+P N G YVLL+N+Y+  + WE  KK+RE + 
Sbjct: 510 VLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMV 569

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
            R +KK PGCS IE+ G V+ FV G  SHP + +I   L  +   +K  GY P     L 
Sbjct: 570 ERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLF 629

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + DE EKE  L  HSEKLA+AFG+L+   G  IRV KNLRVC DCH   KF+S+   REI
Sbjct: 630 DMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREI 689

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           ++RD NRFHHF  G CSCR FW
Sbjct: 690 IVRDRNRFHHFTKGSCSCRDFW 711



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 214/417 (51%), Gaps = 46/417 (11%)

Query: 280 CGALMFGRAVHAFALKACF-------SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           C  +   + +HA  L+ C        SK ++F   L D     G L  A  VF ++   +
Sbjct: 50  CTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFC-ALHD----SGSLPYARLVFNQIPNPT 104

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
             +  S+I GY  + +   AI  ++ M+ +G++PD +   S+  +C   G+L  GK +H 
Sbjct: 105 TFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHC 161

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           +  +    S  Y+ N LM+MY+ CG +  A  VF++M  K +VSW TMIG          
Sbjct: 162 HSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHE 221

Query: 443 ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           A+ LF  M + + +P+ +T+  +L ACA    LE  +++H YI   GI     + +A++D
Sbjct: 222 AIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMD 281

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           +Y KCG   LAR LF+ +P K+L  W IMI G+       +A++ FN+M+ +G++ D+V+
Sbjct: 282 VYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVT 341

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
             S+L AC+H G ++ G ++ ++   +  IE  +     +VD+ ++ G++  A R  + M
Sbjct: 342 MASLLIACTHLGALELG-KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEM 400

Query: 622 PVAPDATIWGSLLCG----------CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           P   D   W +L+ G            + HE++++        E++PD   +  +LA
Sbjct: 401 P-EKDVMTWTALIVGLAMCGQGLKALELFHEMQMS--------EVKPDAITFVGVLA 448



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 177/370 (47%), Gaps = 37/370 (10%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+ S+ + C     L +GK++H    + G    D  + + L+ M+  CG L   R+V
Sbjct: 139 DRFTFPSLFKSCG---VLCEGKQLHCHSTKLGFA-SDAYIQNTLMNMYSNCGCLVSARKV 194

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+K+ N  V  W  ++  Y++     E++ LF++M+   +  +  T   VL   A   + 
Sbjct: 195 FDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDL 254

Query: 215 RRVKDAHK--------------------------------LFDELSDRDVVSWNCMISGY 242
              K  HK                                LF+++ ++++  WN MI+G+
Sbjct: 255 ETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGH 314

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           + +   E+ L +F EM   G   D  TM ++L  C + GAL  G+ +H +  K     ++
Sbjct: 315 VEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDV 374

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
           +    L+DMY+KCG ++ A+RVF++M E+ V++WT++I G A  G    A+ LF  M   
Sbjct: 375 ALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMS 434

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMAD 421
            ++PD      +L AC+  GL+  G    + +     +Q S+     ++DM  + G +A+
Sbjct: 435 EVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAE 494

Query: 422 AESVFNQMPV 431
           AE +   MP+
Sbjct: 495 AEDLIQNMPM 504



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 141/338 (41%), Gaps = 66/338 (19%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T  ++L  CA  + LE  K+VH  I E+GI     VL S L+ ++  CG     R
Sbjct: 235 KPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHT-VLTSALMDVYCKCGCYPLAR 293

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------- 205
            +FNK+    +F WN++++ + +  +++E+L LF +MQ  G+  D  T + +L       
Sbjct: 294 DLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLG 353

Query: 206 -----KCLAVVGNSRR--------------------VKDAHKLFDELSDRDVVSWNCMIS 240
                K L V     +                    ++ A ++F E+ ++DV++W  +I 
Sbjct: 354 ALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIV 413

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G    G   K LE+F EM       D  T V VL+ C++ G +  G              
Sbjct: 414 GLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG-------------- 459

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            I++ N++ + Y                 + S+  +  M+    R G    A  L + M 
Sbjct: 460 -IAYFNSMPNKYGI---------------QPSIEHYGCMVDMLGRAGRIAEAEDLIQNM- 502

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
              + PD + +  +L AC   G L + +     + E D
Sbjct: 503 --PMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELD 538


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 264/630 (41%), Positives = 384/630 (60%), Gaps = 22/630 (3%)

Query: 223 LFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           LF++  DR DV SWN +I+     G + + L  F  M  L    + +T    +  C+   
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            L  G+  H  AL   F  ++  ++ L+DMYSKCG L  A  +F+++  R++V+WTS+I 
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 342 GYAREGVFDGAIRLFRGMVRE---------GIEPDVYAITSILHACACDGLLEIGKDVHD 392
           GY +      A+ +F+  + E         G   D  A+ S+L AC+      + + VH 
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
              +  +   + V N L+D YAKCG ++ +  VF+ M  KD+VSWN+MI           
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTD 276

Query: 443 ALDLFVAMLQ--NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
           A ++F  ML+    + + VT++ +L ACA   AL  G  +H  +++ G   +  +A +I+
Sbjct: 277 AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSII 336

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY KCG   +AR+ FD +  K++ SWT MIAGYGMHGF  +A+  F  M  AG++P+ +
Sbjct: 337 DMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYI 396

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +FISVL ACSH+G ++EGWR+FN M +E N+EP +EHY CMVDLL R G + EAY  I+ 
Sbjct: 397 TFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKS 456

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           M V  D  +WGSLL  CRIH +V+LAE  A  +F+L+P N GYYVLLAN+YA+A +W++V
Sbjct: 457 MKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDV 516

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
           +++R  +  RGL K PG S +E+KG+V++F+ G   HP  +KI   L+ L ++++  GY 
Sbjct: 517 ERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYV 576

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P     L + DE EKE+ +  HSEKLA+AFG++N   G TI V KNLRVCGDCH + K +
Sbjct: 577 PNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLI 636

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK   REI++RD+ RFHHFKDG CSC  +W
Sbjct: 637 SKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 214/440 (48%), Gaps = 56/440 (12%)

Query: 154 VFNK-IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           +FNK  D   V+ WN L+ E ++ G+  ESL  F  M+ L I  +  TF C +K  + + 
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 213 NSRRVKDAHK--------------------------------LFDELSDRDVVSWNCMIS 240
           +    K AH+                                LFDE+  R++V+W  +I+
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 241 GYIANGVAEKGLEVFKEML---------NLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           GY+ N  A + L VFKE L          +G +VD   M++VLS C+          VH 
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
            A+K    K +   NTLLD Y+KCG++  + +VF+ M E+ VVSW SMIA YA+ G+   
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTD 276

Query: 352 AIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
           A  +F GM++  G + +   ++++L ACA +G L +G  +HD + +    +++ ++ +++
Sbjct: 277 AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSII 336

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGV 459
           DMY KCG    A + F+ M  K++ SW  MI           ALD+F  M+    +P+ +
Sbjct: 337 DMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYI 396

Query: 460 TMACILPACASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF-D 517
           T   +L AC+    LE G R  +     + +         +VD+  + G +  A +L   
Sbjct: 397 TFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKS 456

Query: 518 MIPAKDLISWTIMIAGYGMH 537
           M   +D + W  ++A   +H
Sbjct: 457 MKVRRDFVLWGSLLAACRIH 476



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 183/395 (46%), Gaps = 45/395 (11%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T+   ++ C+ L  L  GK+ H      G    D  + S L+ M+  CG L   R
Sbjct: 79  KPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFE-SDLFVSSALIDMYSKCGKLSNAR 137

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM---------QSLGIAADSYTFSC 203
            +F++I    +  W  L+  Y +  +  E+L +FK+          + +G + DS     
Sbjct: 138 VLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMIS 197

Query: 204 VLKCLAVVGNSRRVKDAH--------------------------------KLFDELSDRD 231
           VL   + V N    +  H                                K+FD+++++D
Sbjct: 198 VLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKD 257

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVH 290
           VVSWN MI+ Y  NG++    EVF  ML   G   +  T+ T+L  CA+ GAL  G  +H
Sbjct: 258 VVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLH 317

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
              +K  +   +    +++DMY KCG  + A   F+ M E++V SWT+MIAGY   G   
Sbjct: 318 DQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAR 377

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNAL 409
            A+ +F  M+  G++P+     S+L AC+  G LE G    + +  E +++  +     +
Sbjct: 378 EALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCM 437

Query: 410 MDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
           +D+  + G + +A ++   M V +D V W +++ A
Sbjct: 438 VDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAA 472


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/691 (37%), Positives = 401/691 (58%), Gaps = 47/691 (6%)

Query: 187 KKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
           K++ +  I   S + +     +++  N + + +A  LF  L    V++W  +I  +    
Sbjct: 25  KQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQS 84

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           +  K L  F EM   G   D     +VL  C     L FG +VH F ++     ++   N
Sbjct: 85  LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144

Query: 307 TLLDMYSK-----------------------CGD-------------LDGAIRVFEKMGE 330
            L++MY+K                        GD             +D   RVFE M  
Sbjct: 145 ALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR 204

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVS+ ++IAGYA+ G+++ A+R+ R M    ++PD + ++S+L   +    +  GK++
Sbjct: 205 KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEI 264

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H Y+    + S +Y+ ++L+DMYAK   + D+E VF+++  +D +SWN+++         
Sbjct: 265 HGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRY 324

Query: 443 --ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL LF  M+    +P  V  + ++PACA LA L  G+++HGY+LR G  ++  +A+A+
Sbjct: 325 NEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASAL 384

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY KCG +  AR +FD +   D +SWT +I G+ +HG G +A++ F +M++ G++P++
Sbjct: 385 VDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQ 444

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+F++VL ACSH GLVDE W +FN M     +  +LEHYA + DLL R G L EAY FI 
Sbjct: 445 VAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFIS 504

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            M V P  ++W +LL  C +H  ++LAEKVAE +F ++ +N G YVL+ N+YA   +W+E
Sbjct: 505 KMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKE 564

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           + KLR ++ ++GL+K P CSWIE+K K + FV+G  SHP   KI   LK +  +M++EGY
Sbjct: 565 MAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGY 624

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
              T   L + DE  K   L GHSE+LA+AFGI+N   G TIRVTKN+R+C DCH   KF
Sbjct: 625 VADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKF 684

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +SK   REI++RD++RFHHF  G CSC  +W
Sbjct: 685 ISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 45/317 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +YN  I  + + G  E A+ ++    +   K D+ T  S+L + ++   +  GK++H  +
Sbjct: 209 SYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYV 268

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              GI   D  +GS LV M+     +++  RVF+++       WN L+  Y + G + E+
Sbjct: 269 IRKGI-DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR--------------------------- 215
           L LF++M +  +   +  FS V+   A +                               
Sbjct: 328 LRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDM 387

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 +K A K+FD ++  D VSW  +I G+  +G   + + +F+EM   G   +    
Sbjct: 388 YSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAF 447

Query: 271 VTVLSGCANCGAL-----MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           V VL+ C++ G +      F      + L    ++E+     + D+  + G L+ A    
Sbjct: 448 VAVLTACSHVGLVDEAWGYFNSMTKVYGL----NQELEHYAAVADLLGRAGKLEEAYNFI 503

Query: 326 EKM-GERSVVSWTSMIA 341
            KM  E +   W+++++
Sbjct: 504 SKMCVEPTGSVWSTLLS 520


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 277/821 (33%), Positives = 458/821 (55%), Gaps = 56/821 (6%)

Query: 65  NYNAEIGRFCEV---GNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVH 119
           N N   GR  +    G L KA+  L     + S  D +TY   L+ C   +S + G  VH
Sbjct: 30  NPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVH 89

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI-WNLLMHEYSKTGN 178
             + +S + +D   L S L+ ++  CG  ++   +F  + + +  I W+ ++  ++    
Sbjct: 90  EKLTQSDLQLDSVTLNS-LISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNM 148

Query: 179 FKESLYLFKKMQSLGIAADSYTFS-----CVLKCLAVVGNS------------------- 214
              +L  F  M   G   + Y F+     C       VG+S                   
Sbjct: 149 GFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGC 208

Query: 215 ----------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                       +  A K+F+++ +R+ V+W  MI+  +  G A + +++F +M+  G+ 
Sbjct: 209 GLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYE 268

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC---GDLDGA 321
            D  T+  V+S CAN   L+ G+ +H+ A++   + +      L++MY+KC   G +  A
Sbjct: 269 PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAA 328

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDG-AIRLFRGMVREGIEPDVYAITSILHACAC 380
            ++F+++ + +V SWT+MI GY ++G +D  A+ LFRGM+   + P+ +  +S L ACA 
Sbjct: 329 RKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACAN 388

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              L IG+ V  +  +    S   V+N+L+ MYA+ G + DA   F+ +  K+++S+NT+
Sbjct: 389 LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTV 448

Query: 441 IGA----------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
           I A          L+LF  +  Q       T A +L   AS+  + +G +IH  +++ G+
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL 508

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             +++V NA++ MY +CG +  A  +F+ +  +++ISWT +I G+  HGF   A+  F+ 
Sbjct: 509 KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHK 568

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M + G+ P+EV++I+VL ACSH GLV+EGW+ F  M  E  + P++EHYAC+VD+L R+G
Sbjct: 569 MLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSG 628

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
           +LSEA +FI  MP   DA +W + L  CR+H  ++L +  A+ + E EP +   Y+LL+N
Sbjct: 629 SLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSN 688

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           +YA   KW+EV  +R+ +  + L K  GCSW+E++ KV+ F  G +SHP A +I   L+ 
Sbjct: 689 LYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQN 748

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
           L +++K+ GY P   + L + +E +KE  L  HSEK+A+AFG+++    + IRV KNLR+
Sbjct: 749 LSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRI 808

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CGDCH   K++S    REI++RD+NRFHH KDGRCSC  +W
Sbjct: 809 CGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 276/759 (36%), Positives = 424/759 (55%), Gaps = 45/759 (5%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           K +H+ I ++  V  +  L +KL+ ++   G L   R VF++    +  + N ++  + +
Sbjct: 64  KSIHAQIIKNW-VSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLR 122

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VV 211
                E   LF+ M S  I  +SYT    LK                            V
Sbjct: 123 NQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYV 182

Query: 212 GNS------RR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
           G+S      +R  + DA K+FD + ++DVV WN +I GY+  G+  + +++F EM+  G 
Sbjct: 183 GSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGL 242

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
                TM  +L  C   G    G   H++ L      ++    +L+DMYS  GD   A  
Sbjct: 243 RPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAAL 302

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF+ M  RS++SW +MI+GY + G+   +  LFR +V+ G   D   + S++  C+    
Sbjct: 303 VFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSD 362

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-- 441
           LE G+ +H  I   +++S L +S A++DMY+KCG++  A  VF +M  K++++W  M+  
Sbjct: 363 LENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVG 422

Query: 442 --------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    AL LF  M +     + VT+  ++  CA L +L +GR +H + +RHG + D
Sbjct: 423 LSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFD 482

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDM-IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
             + +A++DMY KCG +  A  LF+     KD+I    MI GYGMHG G  A+  ++ M 
Sbjct: 483 AVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMI 542

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
           +  ++P++ +F+S+L ACSHSGLV+EG   F+ M  + ++ P+ +HYAC+VDL SR G L
Sbjct: 543 EERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRL 602

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
            EA   ++ MP  P   +  +LL GCR H    +  ++A+ +  L+  N+G YV+L+N+Y
Sbjct: 603 EEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIY 662

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           AEA KWE V  +R  +  +G+KK PG S IE+  KV  F A   SHP    I  LL+ LR
Sbjct: 663 AEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLR 722

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
           LE++ EGY P T   L + +E  K   L GHSE+LA+AFG+L+ P G  I++TKNLRVC 
Sbjct: 723 LEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCV 782

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH + K++SK  +REI++RD+NRFHHF +G+CSC  FW
Sbjct: 783 DCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 242/517 (46%), Gaps = 59/517 (11%)

Query: 54  SISKTLVCKTKNYNAEIGRFCEVGNLEKAMEV-----LYSSEKSKIDTKTYCSILQLCAD 108
           S+ +T VC     NA I  F      ++ MEV     +  S   +I++ T    L+ C D
Sbjct: 106 SLPETAVC-----NAMIAGFLRN---QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTD 157

Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNL 168
           L   E G ++       G  +   V GS +V   V  G L + ++VF+ +    V  WN 
Sbjct: 158 LLDDEVGMEIIRAAVRRGFHLHLYV-GSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNS 216

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK------ 222
           ++  Y + G F ES+ +F +M   G+     T + +LK     G  +    AH       
Sbjct: 217 IIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALG 276

Query: 223 --------------------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
                                     +FD +  R ++SWN MISGY+ NG+  +   +F+
Sbjct: 277 MGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFR 336

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
            ++  G   D  T+V+++ GC+    L  GR +H+  ++      +  +  ++DMYSKCG
Sbjct: 337 RLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCG 396

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
            +  A  VF +MG+++V++WT+M+ G ++ G  + A++LF  M  E +  +   + S++H
Sbjct: 397 AIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVH 456

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF-NQMPVKDIV 435
            CA  G L  G+ VH +   +       +++AL+DMYAKCG +  AE +F N+  +KD++
Sbjct: 457 CCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVI 516

Query: 436 SWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREI-HGY 483
             N+MI           AL ++  M+ +  +P+  T   +L AC+    +E G+ + H  
Sbjct: 517 LCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSM 576

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
              H +         +VD++ + G L  A  L   +P
Sbjct: 577 ERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMP 613



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/521 (24%), Positives = 260/521 (49%), Gaps = 27/521 (5%)

Query: 165 IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRRVKDAH 221
           +++ L+H++S T    +S++   ++    ++ +S+  + +++    L  +G++R V    
Sbjct: 48  VFSSLLHQFSNTLIHVKSIH--AQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNV---- 101

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
             FD+ S  +    N MI+G++ N    +   +F+ M +    ++  T +  L  C +  
Sbjct: 102 --FDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLL 159

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
               G  +   A++  F   +   +++++   K G L  A +VF+ M E+ VV W S+I 
Sbjct: 160 DDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIG 219

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           GY ++G+F  +I++F  M+  G+ P    + ++L AC   GL ++G   H Y+    M +
Sbjct: 220 GYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGN 279

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
            ++V  +L+DMY+  G    A  VF+ M  + ++SWN MI           +  LF  ++
Sbjct: 280 DVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLV 339

Query: 452 QNFEP-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
           Q+    D  T+  ++  C+  + LE GR +H  I+R  + +   ++ AIVDMY KCG + 
Sbjct: 340 QSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIK 399

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            A  +F  +  K++I+WT M+ G   +G+  DA+  F  M++  +  + V+ +S+++ C+
Sbjct: 400 QATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCA 459

Query: 571 HSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           H G + +G     + +R+    +  +   + ++D+ ++ G +  A +         D  +
Sbjct: 460 HLGSLTKGRTVHAHFIRHGYAFDAVIT--SALIDMYAKCGKIHSAEKLFNNEFHLKDVIL 517

Query: 630 WGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
             S++ G  +H   + A  V   + E  L+P+ T +  LL 
Sbjct: 518 CNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLT 558


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 274/707 (38%), Positives = 404/707 (57%), Gaps = 49/707 (6%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+ + S+T   K+   +  +M   G+  D ++ S ++   A +     +  A ++FD++ 
Sbjct: 41  LIDQCSETKQLKQ---IHAQMLRTGLFFDPFSASRLITA-AALSPFPSLDYAQQVFDQIP 96

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGR 287
             ++ +WN +I  Y ++    + L +F  ML+   +  D  T   ++   +    L  G+
Sbjct: 97  HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
           A H   +K     ++   N+L+  Y+KCG+L    RVF  +  R VVSW SMI  + + G
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGG 216

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
             + A+ LF+ M  + ++P+   +  +L ACA     E G+ VH YI+ N +  SL +SN
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSN 276

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-------------------------- 441
           A++DMY KCGS+ DA+ +F++MP KDIVSW TM+                          
Sbjct: 277 AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAA 336

Query: 442 ---------------GALDLF--VAMLQNFEPDGVTMACILPACASLAALERGREIHGYI 484
                           AL+LF  + + +  +PD VT+   L ACA L A++ G  IH YI
Sbjct: 337 WNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYI 396

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
            + G+  + ++  +++DMY KCG L  A  +F  +  KD+  W+ MIAG  MHG G DAI
Sbjct: 397 KKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAI 456

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
           A F+ M++  ++P+ V+F ++L ACSH GLV+EG  FFN M     + P ++HYACMVD+
Sbjct: 457 ALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDI 516

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
           L R G L EA   IE MP+AP A++WG+LL  C IH  V LAE+    + ELEP N G Y
Sbjct: 517 LGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAY 576

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
           VLL+N+YA+A KW+ V  LR+ +   GLKK PGCS IE+ G V+ F+ G +SHP AKKI 
Sbjct: 577 VLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIY 636

Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEME-KEVALCGHSEKLAMAFGILNLPAGQTIRV 783
           + L  +   ++  GY P   + L   +E + KE AL  HSEKLA+AFG+++    Q IR+
Sbjct: 637 AKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRI 696

Query: 784 TKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KNLRVCGDCH +AK +SK   REI+LRD  RFHHF++G CSC  +W
Sbjct: 697 VKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 249/518 (48%), Gaps = 86/518 (16%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM--FVTCGDLKEGRRVFNKI 158
           S++  C++ K L   K++H+ +  +G+  D     S+L+          L   ++VF++I
Sbjct: 40  SLIDQCSETKQL---KQIHAQMLRTGLFFDP-FSASRLITAAALSPFPSLDYAQQVFDQI 95

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYTFSCVLKCLA------- 209
            +  ++ WN L+  Y+ + N  +SL +F +M  QS     D +TF  ++K  +       
Sbjct: 96  PHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDF-PDKFTFPFLIKAASELEELFT 154

Query: 210 -----------VVGNSRRVKDA--------------HKLFDELSDRDVVSWNCMISGYIA 244
                      ++G+   + ++              +++F  +  RDVVSWN MI+ ++ 
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQ 214

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G  E+ LE+F+EM       +  TMV VLS CA      FGR VH++  +    + ++ 
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTL 274

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
           +N +LDMY+KCG ++ A R+F+KM E+ +VSWT+M+ GYA+ G +D A  +F  M  + I
Sbjct: 275 SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDI 334

Query: 365 --------------------------------EPDVYAITSILHACACDGLLEIGKDVHD 392
                                           +PD   + S L ACA  G +++G  +H 
Sbjct: 335 AAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHV 394

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           YIK+  M+ + +++ +L+DMY KCG +  A  VF+ +  KD+  W+ MI           
Sbjct: 395 YIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKD 454

Query: 443 ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVANAIV 500
           A+ LF  M ++  +P+ VT   IL AC+ +  +E GR     + L +G+         +V
Sbjct: 455 AIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMV 514

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
           D+  + G+L  A  L + +P     S W  ++    +H
Sbjct: 515 DILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIH 552



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 206/464 (44%), Gaps = 81/464 (17%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  +++  ++L+ L  GK  H ++ +  +  D  +L S L+  +  CG+L  G RV
Sbjct: 135 DKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNS-LIHFYAKCGELGLGYRV 193

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV---- 210
           F  I    V  WN ++  + + G  +E+L LF++M++  +  +  T   VL   A     
Sbjct: 194 FVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDF 253

Query: 211 --------------VGNSR--------------RVKDAHKLFDELSDRDVVS-------- 234
                         +G S                V+DA +LFD++ ++D+VS        
Sbjct: 254 EFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGY 313

Query: 235 -----------------------WNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATM 270
                                  WN +IS Y   G  ++ LE+F E+ L+     D  T+
Sbjct: 314 AKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTL 373

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           V+ LS CA  GA+  G  +H +  K           +L+DMY KCGDL  A+ VF  +  
Sbjct: 374 VSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVER 433

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + V  W++MIAG A  G    AI LF  M  + ++P+    T+IL AC+  GL+E G+  
Sbjct: 434 KDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTF 493

Query: 391 HDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALDLFV 448
            + ++    +   +     ++D+  + G + +A  +  +MP+    S W  ++GA  +  
Sbjct: 494 FNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIH- 552

Query: 449 AMLQNFEPDGVTMACILPACASLAALERGREIHG-YILRHGISA 491
                   + V +A    AC+ L  LE G   HG Y+L   I A
Sbjct: 553 --------ENVVLA--EQACSQLIELEPGN--HGAYVLLSNIYA 584



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 106/201 (52%), Gaps = 12/201 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +NA I  + + G  ++A+E+ +    S+ +K D  T  S L  CA L +++ G  +H  I
Sbjct: 337 WNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYI 396

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+ ++   L + L+ M+  CGDL++   VF+ ++   VF+W+ ++   +  G+ K++
Sbjct: 397 KKQGMKLNCH-LTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDA 455

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-----DRDVVSWNC 237
           + LF KMQ   +  ++ TF+ +L   + VG    V++    F+++         V  + C
Sbjct: 456 IALFSKMQEDKVKPNAVTFTNILCACSHVG---LVEEGRTFFNQMELVYGVLPGVKHYAC 512

Query: 238 MISGYIANGVAEKGLEVFKEM 258
           M+      G+ E+ +E+ ++M
Sbjct: 513 MVDILGRAGLLEEAVELIEKM 533


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 295/802 (36%), Positives = 426/802 (53%), Gaps = 94/802 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL---YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           +YN+ I   C     E+A++ L    +  +  + + T  S+L  C+ L   +DG++    
Sbjct: 135 SYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPG-DDGRR---- 189

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
                       LG +     +  G L EGR         + F +N L+  Y++ G   +
Sbjct: 190 ------------LGREAHAFALKRGFLDEGR---------ERFPFNALLSMYARLGLVDD 228

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
           +  LF+   +         FS                            DVV+WN MIS 
Sbjct: 229 AQSLFRTTAA--------AFSP------------------------GGGDVVTWNTMISL 256

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
            +  G   + +EV  +M++LG   D  T  + L  C+    L  GR +HA  LK      
Sbjct: 257 LVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAA 316

Query: 302 ISF-NNTLLDMYSKCGDLDGAIRVFEKMGE--RSVVSWTSMIAGYAREGVFDGAIRLFRG 358
            SF  + L+DMY+    +  A RVF+ + E  R +  W +MI GYA+ G+ + A+ LF  
Sbjct: 317 NSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSR 376

Query: 359 MVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
           M  E G  P    ++ +L ACA        + +H Y+ +  M  + +V NALMDMYA+ G
Sbjct: 377 MEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLG 436

Query: 418 SMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE---------------------- 455
            M  A  +F  +  +D+VSWNT+I    +     + F+                      
Sbjct: 437 EMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGE 496

Query: 456 -----PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
                P+ +T+  +LP CA+LAA  RG+EIHGY +RH + +D  V +A+VDMY KCG L 
Sbjct: 497 AHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLA 556

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-IEPDEVSFISVLYAC 569
            +R++FD +P +++I+W ++I  YGMHG G +A+A F++M   G   P+EV+FI+ L AC
Sbjct: 557 ASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAAC 616

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI-EMMPVAPDAT 628
           SHSGLVD G   F+ M  +  ++P  + +AC+VD+L R G L EAY  I  M P     +
Sbjct: 617 SHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVS 676

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
            W SLL  CR+H  V+L E  AE +FELEP    +YVLL N+Y+ A  W++   +R ++ 
Sbjct: 677 AWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMR 736

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
           R+G+ K PGCSWIE+ G ++ F+AG SSHP + ++ + +  L   M+REGY P T   L 
Sbjct: 737 RQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLH 796

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + DE EK   L  HSEKLA+AFG+L  P G  IRV KNLRVC DCHE AKFMSK   R+I
Sbjct: 797 DVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDI 856

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           VLRD  RFHHF+DG CSC  +W
Sbjct: 857 VLRDVRRFHHFRDGSCSCGDYW 878



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 180/350 (51%), Gaps = 28/350 (8%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANC---GALMF 285
           RD VS+N +IS        E+ L+  ++ML  G  +V   T+V+VL  C++         
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRL 190

Query: 286 GRAVHAFALKACF---SKEISFNNTLLDMYSKCGDLDGAIRVFEKM------GERSVVSW 336
           GR  HAFALK  F    +E    N LL MY++ G +D A  +F         G   VV+W
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTW 250

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-K 395
            +MI+   + G    A+ +   MV  G+ PD     S L AC+   +L +G+++H  + K
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK 310

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM--PVKDIVSWNTMI----------GA 443
           + D+ ++ +V++AL+DMYA    +A A  VF+ +  P + +  WN MI           A
Sbjct: 311 DADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEA 370

Query: 444 LDLFVAMLQNF--EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           L+LF  M       P   TM+ +LPACA          +HGY+++ G++ +R V NA++D
Sbjct: 371 LELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMD 430

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           MY + G + +AR +F MI  +D++SW  +I G  + G   +A     +M+
Sbjct: 431 MYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQ 480



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 187/389 (48%), Gaps = 42/389 (10%)

Query: 288 AVHAFALKACFSKEIS--FNNTLLDMYSKCGDLDGAIRVFEKMGE--RSVVSWTSMIAGY 343
           ++HA AL+       S    N LL  Y++CGDLD A+ +F       R  VS+ S+I+  
Sbjct: 84  SLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISAL 143

Query: 344 AREGVFDGAIRLFRGMVREGIEPDV--YAITSILHACA---CDGLLEIGKDVHDYIKEN- 397
                ++ A+   R M+ EG   DV  + + S+L AC+    D    +G++ H +  +  
Sbjct: 144 CLFRQWERALDALRDMLAEG-RHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRG 202

Query: 398 --DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK------DIVSWNTMIG------- 442
             D     +  NAL+ MYA+ G + DA+S+F            D+V+WNTMI        
Sbjct: 203 FLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGR 262

Query: 443 ---ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHG-ISADRNVAN 497
              A+++   M+     PDGVT A  LPAC+ L  L  GRE+H  +L+   ++A+  VA+
Sbjct: 263 CAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVAS 322

Query: 498 AIVDMYVKCGVLVLARSLFDMI--PAKDLISWTIMIAGYGMHGFGCDAIATFNDMR-QAG 554
           A+VDMY     +  AR +FDM+  P++ L  W  MI GY   G   +A+  F+ M  +AG
Sbjct: 323 ALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAG 382

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMR-YECNIEPKLEHYA--CMVDLLSRTGNL 611
             P E +   VL AC+ S    EG+     M  Y          +    ++D+ +R G +
Sbjct: 383 CAPSETTMSGVLPACARS----EGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEM 438

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
             A R   M+    D   W +L+ GC + 
Sbjct: 439 DVARRIFAMID-PRDVVSWNTLITGCVVQ 466


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 284/814 (34%), Positives = 425/814 (52%), Gaps = 120/814 (14%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD---LKEGRRVF 155
           Y  +LQLC    +   G+ +H+   ++G++    +  + L +   T G    L++ RR+F
Sbjct: 29  YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88

Query: 156 NKIDNGK--VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           ++I   +  VF WN L+  ++K+G                                    
Sbjct: 89  DEIPLARRNVFTWNSLLSMFAKSG------------------------------------ 112

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
             R+ DA  +F E+ +RD VSW  M+ G    G   + ++   +M   GF     T+  V
Sbjct: 113 --RLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNV 170

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           LS CA   A   GR VH+F +K      +   N++L+MY KCGD + A  VFE+M  RSV
Sbjct: 171 LSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSV 230

Query: 334 -------------------------------VSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
                                          VSW +MIAGY + G+   A++LF  M+ E
Sbjct: 231 SSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHE 290

Query: 363 -GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
             + PD + ITS+L ACA  G + IGK VH YI   +M  +  V+NAL+  YAK GS+ +
Sbjct: 291 SSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVEN 350

Query: 422 AESVFNQ---------------------------------MPVKDIVSWNTMI------- 441
           A  + +Q                                 M  +D+V+W  MI       
Sbjct: 351 ARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNG 410

Query: 442 ---GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
               A+DLF +M+    EP+  T+A +L  CASLA L+ G++IH   +R  +    +V+N
Sbjct: 411 RNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSN 470

Query: 498 AIVDMYVKCGVLVLARSLFDMI-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           AI+ MY + G    AR +FD +   K+ I+WT MI     HG G +A+  F +M +AG+E
Sbjct: 471 AIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVE 530

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           PD ++++ VL ACSH+G V+EG R+++ ++ E  I P++ HYACMVDLL+R G  SEA  
Sbjct: 531 PDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQE 590

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
           FI  MPV PDA  WGSLL  CR+H   +LAE  AE +  ++P+N+G Y  +ANVY+   +
Sbjct: 591 FIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGR 650

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           W +  ++ +    + ++K  G SW  I+ K+++F A    HP    + ++  R+  E+K 
Sbjct: 651 WSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKG 710

Query: 737 EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
            G+ P  +  L + D+  KE  L  HSEKLA+AFG+++ P   T+RV KNLRVC DCH  
Sbjct: 711 AGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAA 770

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            K +SK   REI++RD+ RFHHF+DG CSC+ +W
Sbjct: 771 IKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 221/492 (44%), Gaps = 95/492 (19%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESG----IVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           T  ++L  CA  ++   G+KVHS + + G    + + + VL      M+  CGD +    
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLN-----MYGKCGDAETAST 220

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VF ++    V  WN ++   +  G    +  LF+ M                        
Sbjct: 221 VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPG---------------------- 258

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN-LGFNVDLATMVT 272
                           R +VSWN MI+GY  NG+  K L++F  ML+      D  T+ +
Sbjct: 259 ----------------RSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITS 302

Query: 273 VLSGCANCGALMFGRAVHAF--------------ALKACFSKEISFNN------------ 306
           VLS CAN G +  G+ VHA+              AL + ++K  S  N            
Sbjct: 303 VLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD 362

Query: 307 -------TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                   LL+ Y K GD++ A  +F  M  R VV+WT+MI GY + G  D AI LFR M
Sbjct: 363 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           +  G EP+ Y + ++L  CA    L+ GK +H     + ++ S  VSNA++ MYA+ GS 
Sbjct: 423 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSF 482

Query: 420 ADAESVFNQM-PVKDIVSWNTMIGAL----------DLFVAMLQ-NFEPDGVTMACILPA 467
             A  +F+Q+   K+ ++W +MI AL           LF  ML+   EPD +T   +L A
Sbjct: 483 PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 542

Query: 468 CASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLI 525
           C+    +  G+  +  I   H I+ + +    +VD+  + G+   A+     +P + D I
Sbjct: 543 CSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 602

Query: 526 SWTIMIAGYGMH 537
           +W  +++   +H
Sbjct: 603 AWGSLLSACRVH 614



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 103/460 (22%), Positives = 182/460 (39%), Gaps = 111/460 (24%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV----LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++NA I  + + G   KA+++    L+ S  +  D  T  S+L  CA+L ++  GK+VH+
Sbjct: 263 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAP-DEFTITSVLSACANLGNVRIGKQVHA 321

Query: 121 IICESGIVIDDGVLG--------------------------------SKLVFMFVTCGDL 148
            I  + +  +  V                                  + L+  +V  GD+
Sbjct: 322 YILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDM 381

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-- 206
           +  R +F  ++N  V  W  ++  Y + G   E++ LF+ M + G   +SYT + VL   
Sbjct: 382 ESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVC 441

Query: 207 ----CL------------AVVGNSRRVKD--------------AHKLFDELSDR-DVVSW 235
               CL            +++  S  V +              A ++FD++  R + ++W
Sbjct: 442 ASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITW 501

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFAL 294
             MI     +G  E+ + +F+EML  G   D  T V VLS C++ G +  G R       
Sbjct: 502 TSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKN 561

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           +   + E+S    ++D+                                AR G+F  A  
Sbjct: 562 EHQIAPEMSHYACMVDL-------------------------------LARAGLFSEAQE 590

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
             R   R  +EPD  A  S+L AC      E+ +   + +   D  +S   S A+ ++Y+
Sbjct: 591 FIR---RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYS-AIANVYS 646

Query: 415 KCGSMADAESVFNQMPVKDI-----VSWNTMIGALDLFVA 449
            CG  +DA  ++     K +      SW  +   + +F A
Sbjct: 647 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGA 686


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 252/650 (38%), Positives = 396/650 (60%), Gaps = 14/650 (2%)

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
           LG  ++++  + ++   AV G+   V  A + FD ++ +D+VSW  M++ Y  N   +  
Sbjct: 70  LGHESNAFVGTALIDAYAVCGS---VNSARQAFDAIACKDMVSWTGMVACYAENDRFQDS 126

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           L++F EM  +GFN +  T   VL  C    A   G++VH   LK C+  ++     LLD+
Sbjct: 127 LQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDL 186

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+K GD +  +RVFE+M +  V+ W+ MI+ YA+      A+ LF  M R  + P+ +  
Sbjct: 187 YTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTF 246

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            S+L +CA    L++GK VH ++ +  +  +++VSNALMD+YAKCG + ++  +F ++P 
Sbjct: 247 ASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPN 306

Query: 432 KDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           ++ V+WNTMI           AL L+  ML+   +   VT + +L ACASLAA+E G +I
Sbjct: 307 RNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQI 366

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           H   L+     D  V NA++DMY KCG +  AR +FDM+  +D ISW  MI+GY MHG  
Sbjct: 367 HSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLV 426

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
            +A+  F  M++    P++++F+S+L ACS++GL+D G  +F  M  +  IEP +EHY C
Sbjct: 427 GEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTC 486

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           MV LL R+G+L +A + IE +P+ P+  +W +LL  C IH++V L    A+ + +++P +
Sbjct: 487 MVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQD 546

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
              +VLL+N+YA   +W  V  +R+ +  +G+KK PG SWIE +G V+ F  G +SHP  
Sbjct: 547 EATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDM 606

Query: 721 KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
           K I  +L+ L ++ ++ GY P     L + ++ EK+  L  HSE+LA+AFG++  P+   
Sbjct: 607 KMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGH 666

Query: 781 IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           IR+ KNLR+C DCH   K +SK  +R+I++RD NRFHHF+DG CSC  +W
Sbjct: 667 IRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 238/494 (48%), Gaps = 48/494 (9%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E  +++   + +IL+L   ++  E    +H+ I + G    +  +G+ L+  +  CG + 
Sbjct: 35  EGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHE-SNAFVGTALIDAYAVCGSVN 93

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CL 208
             R+ F+ I    +  W  ++  Y++   F++SL LF +M+ +G   + +TF+ VLK C+
Sbjct: 94  SARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACI 153

Query: 209 AV----VGNSRR---------------------------VKDAHKLFDELSDRDVVSWNC 237
            +    VG S                               D  ++F+E+   DV+ W+ 
Sbjct: 154 GLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSF 213

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MIS Y  +  + + +E+F +M       +  T  +VL  CA+   L  G+ VH   LK  
Sbjct: 214 MISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVG 273

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
               +  +N L+D+Y+KCG LD ++++F ++  R+ V+W +MI GY + G  D A+ L++
Sbjct: 274 LDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYK 333

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M+   ++      +S+L ACA    +E+G  +H    +      + V NAL+DMYAKCG
Sbjct: 334 NMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCG 393

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE--PDGVTMACIL 465
           S+ +A  VF+ +  +D +SWN MI           AL  F  M+Q  E  P+ +T   IL
Sbjct: 394 SIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAF-QMMQETECVPNKLTFVSIL 452

Query: 466 PACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
            AC++   L+ G+     +++ +GI         +V +  + G L  A  L + IP +  
Sbjct: 453 SACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPN 512

Query: 525 IS-WTIMIAGYGMH 537
           +  W  ++    +H
Sbjct: 513 VKVWRALLGACVIH 526



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 227/455 (49%), Gaps = 15/455 (3%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           + DR+ VS+  +I GY+ +   ++ +++F  +   G  ++     T+L    +       
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
            ++HA   K            L+D Y+ CG ++ A + F+ +  + +VSWT M+A YA  
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
             F  +++LF  M   G  P+ +    +L AC       +GK VH  + +   +  LYV 
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE- 455
             L+D+Y K G   D   VF +MP  D++ W+ MI           A++LF  M + F  
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           P+  T A +L +CAS+  L+ G+++H ++L+ G+  +  V+NA++D+Y KCG L  +  L
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           F  +P ++ ++W  MI GY   G G  A++ + +M +  ++  EV++ SVL AC+    +
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           + G +  + +  +   +  +     ++D+ ++ G++  A    +M+    D   W +++ 
Sbjct: 361 ELGTQIHS-LSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLS-ERDEISWNAMIS 418

Query: 636 GCRIHHEVKLAEKVAEHVFELE--PDNTGYYVLLA 668
           G  +H  V  A K  + + E E  P+   +  +L+
Sbjct: 419 GYSMHGLVGEALKAFQMMQETECVPNKLTFVSILS 453



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 3/150 (2%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
            +N  I  + + G+ +KA+ +  +  + ++     TY S+L+ CA L ++E G ++HS+ 
Sbjct: 311 TWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLS 370

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++ I   D V+G+ L+ M+  CG +K  R VF+ +       WN ++  YS  G   E+
Sbjct: 371 LKT-IYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEA 429

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           L  F+ MQ      +  TF  +L   +  G
Sbjct: 430 LKAFQMMQETECVPNKLTFVSILSACSNAG 459


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 262/758 (34%), Positives = 431/758 (56%), Gaps = 45/758 (5%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           KK+   + ++GI   D  L S LV ++V C  L+  R+V  ++    V  WN  +   + 
Sbjct: 9   KKIIFRVIKNGIC-PDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANS 67

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN---------------------- 213
               +E++ LF  M+   I  + + F+ ++   A +G+                      
Sbjct: 68  PYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILI 127

Query: 214 ----------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
                     ++ V++  + F  +   ++ S N ++SG+      ++G  +  ++L  GF
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGF 187

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             ++ T +++L  CA+ G L  G+A+H   +K+  + +    N+L+++Y+KCG  + A +
Sbjct: 188 EPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACK 247

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF ++ ER VVSWT++I G+  EG +   +R+F  M+ EG  P++Y   SIL +C+    
Sbjct: 248 VFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 306

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           +++GK VH  I +N +  + +V  AL+DMYAK   + DAE++FN++  +D+ +W  ++  
Sbjct: 307 VDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAG 366

Query: 443 ---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    A+  F+ M  +  +P+  T+A  L  C+ +A L+ GR++H   ++ G S D
Sbjct: 367 YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGD 426

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             VA+A+VDMY KCG +  A  +FD + ++D +SW  +I GY  HG G  A+  F  M  
Sbjct: 427 MFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLD 486

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
            G  PDEV+FI VL ACSH GL++EG + FN +     I P +EHYACMVD+L R G   
Sbjct: 487 EGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFH 546

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           E   FIE M +  +  IW ++L  C++H  ++  E+ A  +FELEP+    Y+LL+N++A
Sbjct: 547 EVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFA 606

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
               W++V  +R  +S RG+KK PGCSW+E+ G+V++F++   SHP  ++I   L+ L  
Sbjct: 607 AKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQ 666

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
           ++   GY P T + L N  + EK+  L  HSE+LA+AF +L+    +TIR+ KNLR+CGD
Sbjct: 667 KLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGD 726

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CH+  K +S+   +E+V+RD N FHHFK+G CSC+ FW
Sbjct: 727 CHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 245/507 (48%), Gaps = 49/507 (9%)

Query: 79  LEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGS 136
           L++A+++ Y    ++I  +   + S++   A L     G+ +H+ +C+ G    D ++ +
Sbjct: 71  LQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFE-SDILISN 129

Query: 137 KLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA 196
             V M++    ++ G + F  +    +   N L+  +  T    +   +  ++   G   
Sbjct: 130 AFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEP 189

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAH--------------------------------KLF 224
           + YTF  +LK  A  G+    K  H                                K+F
Sbjct: 190 NMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVF 249

Query: 225 DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALM 284
            E+ +RDVVSW  +I+G++A G    GL +F +ML  GFN ++ T +++L  C++   + 
Sbjct: 250 GEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVD 308

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            G+ VHA  +K            L+DMY+K   L+ A  +F ++ +R + +WT ++AGYA
Sbjct: 309 LGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYA 368

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
           ++G  + A++ F  M REG++P+ + + S L  C+    L+ G+ +H    +      ++
Sbjct: 369 QDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMF 428

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QN 453
           V++AL+DMYAKCG + DAE VF+ +  +D VSWNT+I           AL  F AML + 
Sbjct: 429 VASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEG 488

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLA 512
             PD VT   +L AC+ +  +E G++    + + +GI+        +VD+  + G     
Sbjct: 489 TVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEV 548

Query: 513 RSLF-DMIPAKDLISWTIMIAGYGMHG 538
            S   +M    +++ W  ++    MHG
Sbjct: 549 ESFIEEMKLTSNVLIWETVLGACKMHG 575



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 199/413 (48%), Gaps = 38/413 (9%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           N  +  FC+    ++   +L     E  + +  T+ SIL+ CA    L +GK +H  + +
Sbjct: 160 NNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIK 219

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
           SGI  D  +  S LV ++  CG      +VF +I    V  W  L+  +   G +   L 
Sbjct: 220 SGINPDSHLWNS-LVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGLR 277

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLA--------------VVGNS---------------- 214
           +F +M + G   + YTF  +L+  +              +V NS                
Sbjct: 278 IFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYA 337

Query: 215 --RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
             R ++DA  +F+ L  RD+ +W  +++GY  +G  EK ++ F +M   G   +  T+ +
Sbjct: 338 KNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLAS 397

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
            LSGC+    L  GR +H+ A+KA  S ++   + L+DMY+KCG ++ A  VF+ +  R 
Sbjct: 398 SLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRD 457

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
            VSW ++I GY++ G    A++ F  M+ EG  PD      +L AC+  GL+E GK   +
Sbjct: 458 TVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFN 517

Query: 393 YI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
            + K   +  ++     ++D+  + G   + ES   +M +  +++ W T++GA
Sbjct: 518 SLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGA 570



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 146/310 (47%), Gaps = 47/310 (15%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ SIL+ C+ L  ++ GK+VH+ I ++ +  +D V G+ LV M+     L++   +FN+
Sbjct: 293 TFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFV-GTALVDMYAKNRFLEDAETIFNR 351

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-C--LAVVGNS 214
           +    +F W +++  Y++ G  ++++  F +MQ  G+  + +T +  L  C  +A + + 
Sbjct: 352 LIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 411

Query: 215 RR-----------------------------VKDAHKLFDELSDRDVVSWNCMISGYIAN 245
           R+                             V+DA  +FD L  RD VSWN +I GY  +
Sbjct: 412 RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQH 471

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF--SKEIS 303
           G   K L+ F+ ML+ G   D  T + VLS C++ G +  G+  H  +L   +  +  I 
Sbjct: 472 GQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK-HFNSLSKIYGITPTIE 530

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERS-VVSWTSMIAGYAREGVFD----GAIRLFRG 358
               ++D+  + G         E+M   S V+ W +++      G  +     A++LF  
Sbjct: 531 HYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFE- 589

Query: 359 MVREGIEPDV 368
                +EP++
Sbjct: 590 -----LEPEI 594



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 21/274 (7%)

Query: 70  IGRFCEVGNLEKAME--VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           +  + + G  EKA++  +    E  K +  T  S L  C+ + +L+ G+++HS+  ++G 
Sbjct: 364 VAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ 423

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              D  + S LV M+  CG +++   VF+ + +     WN ++  YS+ G   ++L  F+
Sbjct: 424 S-GDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFE 482

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-----RDVVSWNCMISGY 242
            M   G   D  TF  VL   + +G    +++  K F+ LS        +  + CM+   
Sbjct: 483 AMLDEGTVPDEVTFIGVLSACSHMG---LIEEGKKHFNSLSKIYGITPTIEHYACMVDIL 539

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR--AVHAFALKACFSK 300
              G   + +E F E + L  NV +    TVL  C   G + FG   A+  F L+     
Sbjct: 540 GRAGKFHE-VESFIEEMKLTSNVLIWE--TVLGACKMHGNIEFGERAAMKLFELEP---- 592

Query: 301 EISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSV 333
           EI  N  LL +M++  G  D    V   M  R V
Sbjct: 593 EIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGV 626


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 238/570 (41%), Positives = 361/570 (63%), Gaps = 12/570 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           T+L  C     L+ GR VHA  L++ F  +I   NTLL+MY+KCG L+ A +VFEKM +R
Sbjct: 65  TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             V+WT++I+GY++      A+  F  M+R G  P+ + ++S++ A A +     G  +H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
            +  +    S+++V +AL+D+Y + G M DA+ VF+ +  ++ VSWN +I          
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244

Query: 443 -ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            AL+LF  ML++ F P   + A +  AC+S   LE+G+ +H Y+++ G        N ++
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY K G +  AR +FD +  +D++SW  ++  Y  HGFG +A+  F +MR+ GI P+E+
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           SF+SVL ACSHSGL+DEGW ++ +M+ +  I P+  HY  +VDLL R G+L+ A RFIE 
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ P A IW +LL  CR+H   +L    AEHVFEL+PD+ G +V+L N+YA   +W + 
Sbjct: 424 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDA 483

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            ++R+K+   G+KK P CSW+EI+  +++FVA    HP  ++I    + +  ++K  GY 
Sbjct: 484 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 543

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T + +++ D+ E+EV L  HSEK+A+AF +LN P G TI + KN+RVCGDCH   K  
Sbjct: 544 PDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLA 603

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK   REI++RD+NRFHHFKDG CSC+ +W
Sbjct: 604 SKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 193/383 (50%), Gaps = 36/383 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D + Y ++L+ C   K L  G+ VH+ I +S I   D V+G+ L+ M+  CG L+E R+V
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQS-IFRHDIVMGNTLLNMYAKCGSLEEARKV 117

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV---- 210
           F K+       W  L+  YS+     ++L  F +M   G + + +T S V+K  A     
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177

Query: 211 --------------------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGY 242
                               VG++          + DA  +FD L  R+ VSWN +I+G+
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
                 EK LE+F+ ML  GF     +  ++   C++ G L  G+ VHA+ +K+   K +
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG-EKLV 296

Query: 303 SF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +F  NTLLDMY+K G +  A ++F+++ +R VVSW S++  YA+ G    A+  F  M R
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
            GI P+  +  S+L AC+  GLL+ G   ++ +K++ +    +    ++D+  + G +  
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416

Query: 422 AESVFNQMPVKDIVS-WNTMIGA 443
           A     +MP++   + W  ++ A
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNA 439



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 186/369 (50%), Gaps = 14/369 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           +++A K+F+++  RD V+W  +ISGY  +      L  F +ML  G++ +  T+ +V+  
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
            A       G  +H F +K  F   +   + LLD+Y++ G +D A  VF+ +  R+ VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++IAG+AR    + A+ LF+GM+R+G  P  ++  S+  AC+  G LE GK VH Y+ +
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD----------L 446
           +  +   +  N L+DMYAK GS+ DA  +F+++  +D+VSWN+++ A             
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350

Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M +    P+ ++   +L AC+    L+ G   +  + + GI  +      +VD+  +
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410

Query: 506 CGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
            G L  A    + +P +   + W  ++    MH      +  +       ++PD+     
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMH--KNTELGAYAAEHVFELDPDDPGPHV 468

Query: 565 VLYACSHSG 573
           +LY    SG
Sbjct: 469 ILYNIYASG 477



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 75/373 (20%)

Query: 115 GKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
           G ++H    + G   D  V +GS L+ ++   G + + + VF+ +++     WN L+  +
Sbjct: 180 GHQLHGFCVKCGF--DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------------------------KCLA 209
           ++    +++L LF+ M   G     ++++ +                         K +A
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297

Query: 210 VVGN--------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
             GN        S  + DA K+FD L+ RDVVSWN +++ Y  +G  ++ +  F+EM  +
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G   +  + ++VL+ C++ G L  G   +    K     E     T++D+  + GDL+ A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
           +R  E+M                                   IEP      ++L+AC   
Sbjct: 418 LRFIEEM----------------------------------PIEPTAAIWKALLNACRMH 443

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VS 436
              E+G    +++ E D          L ++YA  G   DA  V  +M    +      S
Sbjct: 444 KNTELGAYAAEHVFELDPDDP-GPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 502

Query: 437 WNTMIGALDLFVA 449
           W  +  A+ +FVA
Sbjct: 503 WVEIENAIHMFVA 515


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/638 (40%), Positives = 383/638 (60%), Gaps = 12/638 (1%)

Query: 204 VLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
           V K +    N   +  A K+FDE  +  V  WN +I GY ++      +E++  M   G 
Sbjct: 106 VTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGV 165

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
           N D  T+  VL  C+    L  G+ VH    +  F  ++   N L+ +Y+KCG ++ A  
Sbjct: 166 NPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARI 225

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VFE + +R++VSWTSMI+GY + G+   A+R+F  M +  ++PD  A+ S+L A      
Sbjct: 226 VFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVED 285

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           LE GK +H  + +  ++    +  +L  MYAKCG +  A S F+QM + +++ WN MI  
Sbjct: 286 LEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISG 345

Query: 443 ---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    A+ LF  M+ +N   D +T+   + ACA + +L+  + +  YI +     D
Sbjct: 346 YAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRND 405

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             V  A++DM+ KCG + LAR +FD    KD++ W+ MI GYG+HG G DAI  F  M+Q
Sbjct: 406 VFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQ 465

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           AG+ P++V+F+ +L AC+HSGLV+EGW  F+ M+Y   IE + +HYAC+VDLL R+G+L+
Sbjct: 466 AGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGIEARHQHYACVVDLLGRSGHLN 524

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           EAY FI  MP+ P  ++WG+LL  C+I+  V L E  AE +F L+P NTG+YV L+N+YA
Sbjct: 525 EAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYA 584

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
            +  W+ V K+R  +  +GL K+ G S IEI GK+  F  G  SHP  K+I   L+ L  
Sbjct: 585 SSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLER 644

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
            +K  G+ P     L + ++ EKE  LC HSE+LA+A+G+++   G T+R+TKNLR C +
Sbjct: 645 RLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACIN 704

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CH   K +SK   REIV+RD+NRFHHFK+G CSCR +W
Sbjct: 705 CHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 228/462 (49%), Gaps = 45/462 (9%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
            ++H+ +  SG+V + G L +K V      G++   R+VF++     VF+WN ++  YS 
Sbjct: 88  NQIHAQLVVSGLV-ESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSS 146

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---------------------------- 207
              F +++ ++ +MQ+ G+  D +T  CVLK                             
Sbjct: 147 HNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFV 206

Query: 208 ----LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
               +A+     RV+ A  +F+ L DR++VSW  MISGY  NG+  + L +F +M     
Sbjct: 207 QNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNV 266

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             D   +V+VL    +   L  G+++H   +K     E     +L  MY+KCG +  A  
Sbjct: 267 KPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARS 326

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
            F++M   +V+ W +MI+GYA+ G  + A+ LF+ M+ + I  D   + S + ACA  G 
Sbjct: 327 FFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGS 386

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-- 441
           L++ K + DYI + + ++ ++V+ AL+DM+AKCGS+  A  VF++   KD+V W+ MI  
Sbjct: 387 LDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVG 446

Query: 442 --------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    A+DLF AM Q    P+ VT   +L AC     +E G E+   +  +GI A 
Sbjct: 447 YGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEAR 506

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAG 533
                 +VD+  + G L  A      +P +  +S W  ++  
Sbjct: 507 HQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGA 548



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 191/417 (45%), Gaps = 36/417 (8%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  +        A+E+    + S +  D  T   +L+ C+ +  LE GK+VH  I 
Sbjct: 137 WNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIF 196

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             G    D  + + LV ++  CG +++ R VF  +D+  +  W  ++  Y + G   E+L
Sbjct: 197 RLGFE-SDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEAL 255

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH---------------------- 221
            +F +M+   +  D      VL+    V +  + K  H                      
Sbjct: 256 RIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMY 315

Query: 222 ----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                       FD++   +V+ WN MISGY  NG   + + +F+EM++     D  T+ 
Sbjct: 316 AKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVR 375

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           + +  CA  G+L   + +  +  K  +  ++  N  L+DM++KCG +D A  VF++  ++
Sbjct: 376 SAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDK 435

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            VV W++MI GY   G    AI LF  M + G+ P+      +L AC   GL+E G ++ 
Sbjct: 436 DVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELF 495

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALDLF 447
             +K   +++       ++D+  + G + +A      MP++  VS W  ++GA  ++
Sbjct: 496 HSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIY 552



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 132/261 (50%), Gaps = 15/261 (5%)

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
             +H  +  + +  S ++    ++     G +  A  VF++ P   +  WN +I      
Sbjct: 88  NQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSH 147

Query: 442 ----GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                A++++  M      PDG T+ C+L AC+ +  LE G+ +HG I R G  +D  V 
Sbjct: 148 NFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQ 207

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           N +V +Y KCG +  AR +F+ +  ++++SWT MI+GYG +G   +A+  F  MRQ  ++
Sbjct: 208 NGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVK 267

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           PD ++ +SVL A +    +++G      +++     EP L     +  + ++ G +  A 
Sbjct: 268 PDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDL--LISLTAMYAKCGQVMVAR 325

Query: 616 RFIEMMPVAPDATIWGSLLCG 636
            F + M + P+  +W +++ G
Sbjct: 326 SFFDQMEI-PNVMMWNAMISG 345



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 9/222 (4%)

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           +IH  ++  G+     +    V+     G +  AR +FD  P   +  W  +I GY  H 
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
           F  DAI  ++ M+ +G+ PD  +   VL ACS   +++ G R    + +    E  +   
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQI-FRLGFESDVFVQ 207

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATI--WGSLLCGCRIHHEVKLAEKVAEHVFE- 655
             +V L ++ G + +A    E +    D  I  W S++ G   +     A ++   + + 
Sbjct: 208 NGLVALYAKCGRVEQARIVFEGL---DDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQR 264

Query: 656 -LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
            ++PD      +L   Y + E  E+ K +   + + GL+  P
Sbjct: 265 NVKPDWIALVSVL-RAYTDVEDLEQGKSIHGCVVKMGLEFEP 305


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 289/775 (37%), Positives = 417/775 (53%), Gaps = 88/775 (11%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           YC +L+ C       D KK+H  I ++     +  L + LV  +     +   RRVF+++
Sbjct: 18  YCELLKHC------RDTKKIHCHIIKA-FRNPEIFLLNNLVSAYAKFDRITYARRVFDQM 70

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
               ++ WN L+  YSK                             L CL          
Sbjct: 71  PQRNLYSWNTLLSSYSK-----------------------------LACLP--------- 92

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGC 277
           +  ++F  +  RD+VSWN +IS Y   G   + ++ +  ML N  FN++   + T+L   
Sbjct: 93  EMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILA 152

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV--- 334
           +  G +  G  VH   +K  F   +   + L+DMYSK G +  A + F++M E++VV   
Sbjct: 153 SKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYN 212

Query: 335 ----------------------------SWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
                                       SWT+MIAG+ + G+   AI LFR M  E +E 
Sbjct: 213 TLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEM 272

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D Y   S+L AC     L+ GK VH YI   D Q +++V +AL+DMY KC S+  AE+VF
Sbjct: 273 DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVF 332

Query: 427 NQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALE 475
            +M  K++VSW  M+           A+ +F  M  N  EPD  T+  ++ +CA+LA+LE
Sbjct: 333 RKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLE 392

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
            G + H   L  G+ +   V+NA+V +Y KCG +  +  LF  +   D +SWT +++GY 
Sbjct: 393 EGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYA 452

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
             G   + +  F  M   G +PD+V+FI VL ACS +GLV +G + F  M  E  I P  
Sbjct: 453 QFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIE 512

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           +HY CM+DL SR G L EA +FI  MP +PDA  W SLL  CR H  +++ +  AE + +
Sbjct: 513 DHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLK 572

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           LEP NT  Y+LL+++YA   KWEEV  LR+ +  +GL+K PGCSWI+ K +V+IF A   
Sbjct: 573 LEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQ 632

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
           S+P + +I S L++L  +M +EGY P     L + D+ EK   L  HSEKLA+AFG++ +
Sbjct: 633 SNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFI 692

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           P G  IRV KNLRVCGDCH   K++SK  +REI++RD+ RFH FKDGRCSC  FW
Sbjct: 693 PPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 148/313 (47%), Gaps = 37/313 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  F + G   +A+++      E  ++D  T+ S+L  C  + +L++GK+VH+ I
Sbjct: 241 SWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYI 300

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +    D+  +GS LV M+  C  +K    VF K++   V  W  ++  Y + G  +E+
Sbjct: 301 IRTDYQ-DNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEA 359

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK---------------CLAVV---------------- 211
           + +F  MQ+ GI  D +T   V+                C A+V                
Sbjct: 360 VKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTL 419

Query: 212 -GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
            G    ++D+H+LF E+S  D VSW  ++SGY   G A + L +F+ ML  GF  D  T 
Sbjct: 420 YGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTF 479

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT-LLDMYSKCGDLDGAIRVFEKMG 329
           + VLS C+  G +  G  +    +K      I  + T ++D++S+ G L+ A +   KM 
Sbjct: 480 IGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMP 539

Query: 330 -ERSVVSWTSMIA 341
                + W S+++
Sbjct: 540 FSPDAIGWASLLS 552


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/703 (38%), Positives = 404/703 (57%), Gaps = 74/703 (10%)

Query: 202 SCVLKCLAVVGNSRR---VKDAHKLFDELSDR---DVVSWNCMISGYIANGVAEKGLEVF 255
           S V  C A+V    R   +++A  +FDE++ R   DV+SWN ++S ++ +  A   L++F
Sbjct: 43  SNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLF 102

Query: 256 KEMLNL------GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
            +M  +          D+ ++V +L  C +  A+   + VH  A++     ++   N L+
Sbjct: 103 SKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALI 162

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE---- 365
           D Y+KCG ++ A++VF  M  + VVSW +M+AGY++ G F  A  LF+ M +E I     
Sbjct: 163 DAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMV 222

Query: 366 -------------------------------PDVYAITSILHACACDGLLEIGKDVHDY- 393
                                          P+   I S+L ACA  G    G ++H Y 
Sbjct: 223 TWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYS 282

Query: 394 ------IKENDM---QSSLYVSNALMDMYAKCGSMADAESVFNQMPV--KDIVSWNTMIG 442
                   +ND       L V NAL+DMY+KC S   A S+F+ +P+  +++V+W  MIG
Sbjct: 283 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIG 342

Query: 443 ----------ALDLFVAMLQN---FEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
                     AL LFV M+       P+  T++CIL ACA LAA+  G++IH Y+LRH  
Sbjct: 343 GHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQ 402

Query: 490 --SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
             S+   VAN +++MY KCG +  AR +FD +  K  ISWT M+ GYGMHG G +A+  F
Sbjct: 403 YDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF 462

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
           + MR+AG  PD+++F+ VLYACSH G+VD+G  +F+ M  +  + P+ EHYA  +DLL+R
Sbjct: 463 DKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLAR 522

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            G L +A++ ++ MP+ P A +W +LL  CR+H  V+LAE     + E+  +N G Y L+
Sbjct: 523 FGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLI 582

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLL 727
           +N+YA A +W++V ++R  + + G+KK PGCSW++ +     F  G  SHP + +I +LL
Sbjct: 583 SNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALL 642

Query: 728 KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNL 787
           + L   +K  GY P+T +AL + DE EK   L  HSEKLA+A+G+L    G  IR+TKNL
Sbjct: 643 ESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNL 702

Query: 788 RVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           RVCGDCH    ++SK    EIV+RD +RFHHFK+G CSC G+W
Sbjct: 703 RVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 250/511 (48%), Gaps = 67/511 (13%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           ++E+S  D  +  +IL  C  LK++   K+VH     +G  +D  V G+ L+  +  CG 
Sbjct: 114 TNERS--DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFV-GNALIDAYAKCGL 170

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           ++   +VFN ++   V  WN ++  YS++GNFK +  LFK M+   I             
Sbjct: 171 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPL----------- 219

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                                  D+V+W  +I+GY   G + + L VF++M+  G   + 
Sbjct: 220 -----------------------DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNC 256

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACF----------SKEISFNNTLLDMYSKCGD 317
            T+++VLS CA+ GA   G  +HA++LK C            +++   N L+DMYSKC  
Sbjct: 257 VTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 316

Query: 318 LDGAIRVFE--KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE--GIEPDVYAITS 373
              A  +F+   + ER+VV+WT MI G+A+ G  + A++LF  M+ E  G+ P+ Y I+ 
Sbjct: 317 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 376

Query: 374 ILHACACDGLLEIGKDVHDYI-KENDMQSSLY-VSNALMDMYAKCGSMADAESVFNQMPV 431
           IL ACA    + IGK +H Y+ + +   SS Y V+N L++MY+KCG +  A  VF+ M  
Sbjct: 377 ILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQ 436

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           K  +SW +M+           ALD+F  M +  F PD +T   +L AC+    +++G   
Sbjct: 437 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSY 496

Query: 481 HGYI-LRHGISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWTIMIAGYGMHG 538
              +   +G++         +D+  + G L  A +++ DM      + W  +++   +H 
Sbjct: 497 FDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHS 556

Query: 539 FGCDAIATFNDMRQAGIEPD-EVSFISVLYA 568
               A    N + +   E D   + IS +YA
Sbjct: 557 NVELAEHALNKLVEMNAENDGSYTLISNIYA 587



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 215/482 (44%), Gaps = 73/482 (15%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           ML  G  +D  T+  VL  C    +   G A H       F   +   N L+ MYS+CG 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 318 LDGAIRVFEKMGER---SVVSWTSMIAGYAREGVFDGAIRLFRGM---VRE---GIEPDV 368
           L+ A  +F+++ +R    V+SW S+++ + +      A+ LF  M   V E       D+
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
            +I +IL AC     +   K+VH     N     ++V NAL+D YAKCG M +A  VFN 
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 429 MPVKDIVSWNTMIG---------------------------------------------A 443
           M  KD+VSWN M+                                              A
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 444 LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRH----------GISAD 492
           L++F  M+     P+ VT+  +L ACASL A  +G EIH Y L++          G   D
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIP--AKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
             V NA++DMY KC     ARS+FD IP   +++++WT+MI G+  +G   DA+  F +M
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360

Query: 551 --RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA-CMVDLLSR 607
                G+ P+  +   +L AC+H   +  G +    +      +      A C++++ S+
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYV 665
            G++  A    + M     A  W S++ G  +H     A  + + + +    PD+  + V
Sbjct: 421 CGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 479

Query: 666 LL 667
           +L
Sbjct: 480 VL 481



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 8/169 (4%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYC--SILQLCADLKSLEDGKKVHS 120
            +   IG   + G+   A+++     SE   +    Y    IL  CA L ++  GK++H+
Sbjct: 336 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 395

Query: 121 IICESGIVIDDG-VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
            +            + + L+ M+  CGD+   R VF+ +       W  +M  Y   G  
Sbjct: 396 YVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 455

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
            E+L +F KM+  G   D  TF  VL   +  G    V      FD +S
Sbjct: 456 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCG---MVDQGLSYFDSMS 501


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 265/672 (39%), Positives = 389/672 (57%), Gaps = 48/672 (7%)

Query: 205 LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
           +K +    NS  +K A  LFD++ + D+ +W  +ISG+  +G  +K ++++  +L+    
Sbjct: 15  IKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVR 74

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D   +++V   CA  G L+  + +H  A++  F+K++   N L+DM+ KC  ++GA  V
Sbjct: 75  PDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCV 134

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F+ M  + VVSWTSM   Y   G+    I LFR M   GI  +   ++SIL ACA    +
Sbjct: 135 FDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA--DYI 192

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA- 443
           ++G++VH +I  N+M+ ++YVS+AL++MYA    +  A  VF+ M  +DIVSWN M+ A 
Sbjct: 193 KLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAY 252

Query: 444 ---------LDLFVAM-------------------LQN-----------------FEPDG 458
                    L LF  M                   +QN                  +P+ 
Sbjct: 253 FLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNR 312

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           +T+   LP C +L +L  G+EIHGY+ RH    D  +  A+V +Y KCG L L+R +F+ 
Sbjct: 313 ITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNT 372

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +P KD+++W  MI    MHG G +++  FN M  +G+EP+ V+FI VL  CSHS L DEG
Sbjct: 373 MPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEG 432

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
              FN M  E +I P  +HY+CMVD+LSR G L EAY FI  MP+ P A  WG+LL  CR
Sbjct: 433 LLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACR 492

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
           ++  V+L    A  +FE+EPDN G YVLL+N+   A+KW E  ++R+ +  +GL K PG 
Sbjct: 493 VYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGR 552

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           SW+++K KV  FV G  S+     I   L  +  +M+ +GY P T + L N D+ ++E  
Sbjct: 553 SWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREET 612

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
           LC HSE+LA+AFGILN     T+RV KNLR+CGDCH   K ++K    +I++RDS RFHH
Sbjct: 613 LCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHH 672

Query: 819 FKDGRCSCRGFW 830
           F+DG C+C  FW
Sbjct: 673 FRDGYCTCNDFW 684



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 200/463 (43%), Gaps = 81/463 (17%)

Query: 137 KLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA 196
           KL+   +  GDLK    +F+KI    +  W +L+  +++ G  K+++ ++  + S  +  
Sbjct: 16  KLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRP 75

Query: 197 DSYTFSCVLKCLA------------------------VVGNS--------RRVKDAHKLF 224
           D +    V K  A                        V+GN+        + V  A  +F
Sbjct: 76  DKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVF 135

Query: 225 DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALM 284
           D++  +DVVSW  M   Y+  G+  +G+ +F+EM   G   +  T+ ++L  CA+   + 
Sbjct: 136 DDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACAD--YIK 193

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            GR VH F L+      +  ++ L++MY+    L  A  VF+ M  R +VSW  M+  Y 
Sbjct: 194 LGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYF 253

Query: 345 REGVFDGAIRLFRGMVRE-----------------------------------GIEPDVY 369
               ++  + LF  M +E                                   GI+P+  
Sbjct: 254 LNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRI 313

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            I S L  C     L  GK++H Y+  +     + ++ AL+ +YAKCG +  +  VFN M
Sbjct: 314 TIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTM 373

Query: 430 PVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACASLAALERGR 478
           P KD+V+WNTMI A          L LF  ML +  EP+ VT   +L  C+     + G 
Sbjct: 374 PRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGL 433

Query: 479 EIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
            +   +   H I+ D +  + +VD+  + G L  A      +P
Sbjct: 434 LVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMP 476



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 183/424 (43%), Gaps = 69/424 (16%)

Query: 77  GNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G  +KA+++  +  S   + D     S+ + CA    L   KK+H    + G    D VL
Sbjct: 56  GFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFN-KDLVL 114

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
           G+ L+ MF  C  +   R VF+ +    V  W  + + Y   G  ++ + LF++M   GI
Sbjct: 115 GNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGI 174

Query: 195 AADSYTFSCVLKCLA------------------------------VVGNSRRVKDAHKLF 224
            A+S T S +L   A                              +  +S  +K A  +F
Sbjct: 175 RANSLTVSSILPACADYIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVF 234

Query: 225 DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA---------------- 268
           D +  RD+VSWN M++ Y  N   E+GL +F +M   G  ++ A                
Sbjct: 235 DSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHE 294

Query: 269 -------------------TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
                              T+V+ L GC N  +L  G+ +H +  +  F ++++    L+
Sbjct: 295 LALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALV 354

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
            +Y+KCGDL+ +  VF  M  + VV+W +MI   +  G    ++ LF  M+  G+EP+  
Sbjct: 355 LLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSV 414

Query: 370 AITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               +L  C+   L + G  V + +  E+ +       + ++D+ ++ G + +A     +
Sbjct: 415 TFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRK 474

Query: 429 MPVK 432
           MP++
Sbjct: 475 MPIE 478



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 11/201 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I    + G  E A+ +L   + S I     T  S L  C +L+SL  GK++H  +
Sbjct: 279 SWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYV 338

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
                 I+D  + + LV ++  CGDL+  R VFN +    V  WN ++   S  G   ES
Sbjct: 339 FRHWF-IEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGES 397

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSWNC 237
           L LF KM   G+  +S TF   +  L+   +S+   +   +F+ +S       D   ++C
Sbjct: 398 LILFNKMLDSGVEPNSVTF---IGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSC 454

Query: 238 MISGYIANGVAEKGLEVFKEM 258
           M+      G  E+  +  ++M
Sbjct: 455 MVDVLSRAGRLEEAYDFIRKM 475


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 275/796 (34%), Positives = 433/796 (54%), Gaps = 64/796 (8%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + +  TY  +LQ CA  ++L +G+K+HS+  +  ++  + +LG+ +V M+  C    + +
Sbjct: 40  RAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAK 99

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
             F+ ++   ++ W  L+  ++ +G  KE+L   ++M+  G+  D+ TF   +  L   G
Sbjct: 100 AAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF---ITALGSCG 156

Query: 213 NSRRVKDAHKLFDELSD------------------------------------RDVVSWN 236
           +   ++D  ++   + D                                    R+V+SW+
Sbjct: 157 DPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWS 216

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            M   +  +G   + L  F+ ML LG     + MVT+LS C++   +  GR +H+    +
Sbjct: 217 IMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALS 276

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE--RSVVSWTSMIAGYAREGVFDGAIR 354
            F  E+   N ++ MY +CG ++ A +VF+ M E  R VVSW  M++ Y        AI+
Sbjct: 277 GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQ 336

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           L++ M    +  D     S+L AC+    + +G+ +H  I  ++++ ++ V NAL+ MYA
Sbjct: 337 LYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA 393

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIGAL----------DLFVAML--------QNFEP 456
           KCGS  +A +VF++M  + I+SW T+I A            LF  ML        Q  +P
Sbjct: 394 KCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKP 453

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           D +    IL ACA ++ALE+G+ +       G+S+D+ V  A+V++Y KCG +   R +F
Sbjct: 454 DALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIF 513

Query: 517 DMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           D + ++ D+  W  MIA Y   G   +A+  F  M   G+ PD  SF+S+L ACSH+GL 
Sbjct: 514 DGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLE 573

Query: 576 DEGWRFFNMMRYEC-NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           D+G  +F  M  E  N+   ++H+ C+ DLL R G L EA  F+E +PV PDA  W SLL
Sbjct: 574 DQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 633

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             CR H ++K A++VA  +  LEP     YV L+N+YAE +KW  V K+R+ ++ +G+KK
Sbjct: 634 AACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKK 693

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
             G S IEI   ++ F  G  +HP  ++I   L +L  +MK  GY P T+  L   DE E
Sbjct: 694 ERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQE 753

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
           KE  L  HSE+LA+A G+++ P G  +RVTKNLRVC DCH   K +SK A R+IV+RD  
Sbjct: 754 KERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPT 813

Query: 815 RFHHFKDGRCSCRGFW 830
           RFH FKDG+CSC+ +W
Sbjct: 814 RFHLFKDGKCSCQDYW 829



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 5/192 (2%)

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHG-ISADRNVANAIVDMYVKCGVLV 510
           Q    +  T A +L  CA   AL  GR+IH   ++H  +  +  + N IV MY  C    
Sbjct: 37  QAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPG 96

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            A++ FD +  ++L SWT ++A + + G   + +     MRQ G+ PD V+FI+ L +C 
Sbjct: 97  DAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCG 156

Query: 571 HSGLVDEGWRFFNM-MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
               + +G R   M +     I+PK+ +   ++++  + G+LS A R    M    +   
Sbjct: 157 DPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAKMERTRNVIS 214

Query: 630 WGSLLCGCRIHH 641
           W S++ G    H
Sbjct: 215 W-SIMAGAHALH 225



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 90/414 (21%), Positives = 166/414 (40%), Gaps = 75/414 (18%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           LY   + + D  TY S+L  C+  + +  G+ +H  I    +   + ++G+ LV M+  C
Sbjct: 337 LYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELE-KNVIVGNALVSMYAKC 395

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-------QSLGIAADS 198
           G   E R VF+K++   +  W  ++  Y +     E+ +LF++M        S  +  D+
Sbjct: 396 GSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDA 455

Query: 199 YTFSCVLKCLAVV--------------------------------GNSRRVKDAHKLFDE 226
             F  +L   A V                                G    +++  ++FD 
Sbjct: 456 LAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDG 515

Query: 227 LSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
           +  R DV  WN MI+ Y   G + + L++F  M   G   D  + V++L  C++ G    
Sbjct: 516 VCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQ 575

Query: 286 GRAVHAFALKAC--FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAG 342
           G++            ++ I     + D+  + G L  A    EK+  +   V+WTS++A 
Sbjct: 576 GKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAA 635

Query: 343 YAREGVFDGAIRLFRGMVREGIEP----------DVYAITSILHACAC-------DGL-- 383
                    A  +   ++R  +EP          ++YA     HA A         G+  
Sbjct: 636 CRNHRDLKRAKEVANKLLR--LEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKK 693

Query: 384 ------LEIGKDVHDYIKENDMQS-SLYVSNALMDMYAK---CGSMADAESVFN 427
                 +EIGK +HD+   +D    +  +   L  ++++   CG + D + V +
Sbjct: 694 ERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLH 747


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 254/663 (38%), Positives = 397/663 (59%), Gaps = 14/663 (2%)

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
           F +  ++  ++  L +  D+Y  + +L C    G++   K    +F ++ + ++  WN M
Sbjct: 29  FNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSK---LVFSQVKEPNIFLWNTM 85

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I G ++    +  + ++  M   GF  +  T+  VL  CA    +  G  +H+  +KA +
Sbjct: 86  IRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGY 145

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             ++    +LL +Y KC + D A++VF+ + +++VVSWT++I GY   G F  AI  F+ 
Sbjct: 146 DHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKK 205

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           ++  G++PD +++  +L ACA  G    G+ +  YI ++ M  +++V+ +L+DMY KCG+
Sbjct: 206 LLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGN 265

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPA 467
           +  A  +F+ MP KDIVSW+TMI           ALDLF  M  +N +PD  TM  +L A
Sbjct: 266 LERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSA 325

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           CA+L AL+ G      + R+   ++  +  A++DMY KCG +  A  +F  +  KD + W
Sbjct: 326 CATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVW 385

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
             M+ G  M+G      + F+ + + GI PDE +FI +L  C+H G V+EG +FFN M+ 
Sbjct: 386 NAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKR 445

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
             ++ P +EHY CMVDLL R G L+EA++ I  MP+ P+A +WG+LL GC++H +  LAE
Sbjct: 446 VFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAE 505

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
           +V + + ELEP N+G YV L+N+Y+   +WEE +K+R  +  + ++K   CSWIEI G V
Sbjct: 506 QVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIV 565

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
           + F+ G  SH  ++KI + L  L  E+K  G+ P T + L + +E EKE  L  HSEKLA
Sbjct: 566 HEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLA 625

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
           +AFG++  P    IRV KNLRVCGDCH+  K +SK  +REI++RD+NRFH F DG CSCR
Sbjct: 626 VAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCR 685

Query: 828 GFW 830
            +W
Sbjct: 686 DYW 688



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 210/437 (48%), Gaps = 45/437 (10%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G     + VF+++    +F+WN ++        F ++++L+  M+  G   +++T   VL
Sbjct: 62  GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121

Query: 206 KC--------LAVVGNSRRVK------------------------DAHKLFDELSDRDVV 233
           K         L +  +S  VK                        DA K+FD++ D++VV
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           SW  +I+GYI++G   + +  FK++L +G   D  ++V VL+ CA  G    G  +  + 
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
             +   + +    +LLDMY KCG+L+ A  +F  M E+ +VSW++MI GYA  G+   A+
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
            LF  M  E ++PD Y +  +L ACA  G L++G      +  N+  S+  +  AL+DMY
Sbjct: 302 DLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMY 361

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGALDL---------FVAMLQN--FEPDGVTMA 462
           +KCGS+  A  +F  M  KD V WN M+  L +           ++++     PD  T  
Sbjct: 362 SKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFI 421

Query: 463 CILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
            +L  C     +  GR+    + R   ++        +VD+  + G+L  A  L + +P 
Sbjct: 422 GLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPM 481

Query: 522 K-DLISWTIMIAGYGMH 537
           K + + W  ++ G  +H
Sbjct: 482 KPNAVVWGALLGGCKLH 498



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 178/379 (46%), Gaps = 35/379 (9%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L+ CA    +  G K+HS++ ++G    D  + + L+ ++V C +  +  +VF+ I + 
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAG-YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK 178

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-------S 214
            V  W  ++  Y  +G+F+E++  FKK+  +G+  DS++   VL   A +G+        
Sbjct: 179 NVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWID 238

Query: 215 RRVKD-------------------------AHKLFDELSDRDVVSWNCMISGYIANGVAE 249
           R + D                         A+ +F  + ++D+VSW+ MI GY  NG+ +
Sbjct: 239 RYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQ 298

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L++F +M +     D  TMV VLS CA  GAL  G    +   +  F         L+
Sbjct: 299 QALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALI 358

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           DMYSKCG +  A  +F  M ++  V W +M+ G +  G       LF  + + GI PD  
Sbjct: 359 DMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDEN 418

Query: 370 AITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               +L  C   G +  G+   + +K    +  S+     ++D+  + G + +A  + N 
Sbjct: 419 TFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINN 478

Query: 429 MPVK-DIVSWNTMIGALDL 446
           MP+K + V W  ++G   L
Sbjct: 479 MPMKPNAVVWGALLGGCKL 497



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 130/308 (42%), Gaps = 43/308 (13%)

Query: 71  GRFCE-VGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVI 129
           G F E +G  +K +E+       K D+ +   +L  CA L     G+ +   I +SG+  
Sbjct: 194 GHFREAIGAFKKLLEM-----GLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMG- 247

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
            +  + + L+ M+V CG+L+    +F+ +    +  W+ ++  Y+  G  +++L LF +M
Sbjct: 248 RNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQM 307

Query: 190 QSLGIAADSYTFSCVLKCLAVVG--------------------------------NSRRV 217
           QS  +  D YT   VL   A +G                                    V
Sbjct: 308 QSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSV 367

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
             A ++F  +  +D V WN M+ G   NG A+    +F  +   G   D  T + +L GC
Sbjct: 368 TQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGC 427

Query: 278 ANCGALMFGRAVHAFALKACFS--KEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVV 334
            + G +  GR      +K  FS    I     ++D+  + G L+ A ++   M  + + V
Sbjct: 428 THGGFVNEGRQFFN-NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAV 486

Query: 335 SWTSMIAG 342
            W +++ G
Sbjct: 487 VWGALLGG 494


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 254/663 (38%), Positives = 397/663 (59%), Gaps = 14/663 (2%)

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
           F +  ++  ++  L +  D+Y  + +L C    G++   K    +F ++ + ++  WN M
Sbjct: 29  FNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSK---LVFSQVKEPNIFLWNTM 85

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I G ++    +  + ++  M   GF  +  T+  VL  CA    +  G  +H+  +KA +
Sbjct: 86  IRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGY 145

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             ++    +LL +Y KC + D A++VF+ + +++VVSWT++I GY   G F  AI  F+ 
Sbjct: 146 DHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKK 205

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           ++  G++PD +++  +L ACA  G    G+ +  YI ++ M  +++V+ +L+DMY KCG+
Sbjct: 206 LLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGN 265

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPA 467
           +  A  +F+ MP KDIVSW+TMI           ALDLF  M  +N +PD  TM  +L A
Sbjct: 266 LERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSA 325

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           CA+L AL+ G      + R+   ++  +  A++DMY KCG +  A  +F  +  KD + W
Sbjct: 326 CATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVW 385

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
             M+ G  M+G      + F+ + + GI PDE +FI +L  C+H G V+EG +FFN M+ 
Sbjct: 386 NAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKR 445

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
             ++ P +EHY CMVDLL R G L+EA++ I  MP+ P+A +WG+LL GC++H +  LAE
Sbjct: 446 VFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAE 505

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
           +V + + ELEP N+G YV L+N+Y+   +WEE +K+R  +  + ++K   CSWIEI G V
Sbjct: 506 QVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIV 565

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
           + F+ G  SH  ++KI + L  L  E+K  G+ P T + L + +E EKE  L  HSEKLA
Sbjct: 566 HEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLA 625

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
           +AFG++  P    IRV KNLRVCGDCH+  K +SK  +REI++RD+NRFH F DG CSCR
Sbjct: 626 VAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCR 685

Query: 828 GFW 830
            +W
Sbjct: 686 DYW 688



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 210/437 (48%), Gaps = 45/437 (10%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G     + VF+++    +F+WN ++        F ++++L+  M+  G   +++T   VL
Sbjct: 62  GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121

Query: 206 KC--------LAVVGNSRRVK------------------------DAHKLFDELSDRDVV 233
           K         L +  +S  VK                        DA K+FD++ D++VV
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           SW  +I+GYI++G   + +  FK++L +G   D  ++V VL+ CA  G    G  +  + 
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
             +   + +    +LLDMY KCG+L+ A  +F  M E+ +VSW++MI GYA  G+   A+
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
            LF  M  E ++PD Y +  +L ACA  G L++G      +  N+  S+  +  AL+DMY
Sbjct: 302 DLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMY 361

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGALDL---------FVAMLQN--FEPDGVTMA 462
           +KCGS+  A  +F  M  KD V WN M+  L +           ++++     PD  T  
Sbjct: 362 SKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFI 421

Query: 463 CILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
            +L  C     +  GR+    + R   ++        +VD+  + G+L  A  L + +P 
Sbjct: 422 GLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPM 481

Query: 522 K-DLISWTIMIAGYGMH 537
           K + + W  ++ G  +H
Sbjct: 482 KPNAVVWGALLGGCKLH 498



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 177/379 (46%), Gaps = 35/379 (9%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L+ CA    +  G K+HS++ ++G    D  + + L+ ++V C +  +  +VF+ I + 
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAG-YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK 178

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-------S 214
            V  W  ++  Y  +G+F+E++  FKK+  +G+  DS++   VL   A +G+        
Sbjct: 179 NVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWID 238

Query: 215 RRVKD-------------------------AHKLFDELSDRDVVSWNCMISGYIANGVAE 249
           R + D                         A+ +F  + ++D+VSW+ MI GY  NG+ +
Sbjct: 239 RYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQ 298

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L++F +M +     D  TMV VLS CA  GAL  G    +   +  F         L+
Sbjct: 299 QALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALI 358

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           DMYSKCG +  A  +F  M  +  V W +M+ G +  G       LF  + + GI PD  
Sbjct: 359 DMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDEN 418

Query: 370 AITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               +L  C   G +  G+   + +K    +  S+     ++D+  + G + +A  + N 
Sbjct: 419 TFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINN 478

Query: 429 MPVK-DIVSWNTMIGALDL 446
           MP+K + V W  ++G   L
Sbjct: 479 MPMKPNAVVWGALLGGCKL 497



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 130/308 (42%), Gaps = 43/308 (13%)

Query: 71  GRFCE-VGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVI 129
           G F E +G  +K +E+       K D+ +   +L  CA L     G+ +   I +SG+  
Sbjct: 194 GHFREAIGAFKKLLEM-----GLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMG- 247

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
            +  + + L+ M+V CG+L+    +F+ +    +  W+ ++  Y+  G  +++L LF +M
Sbjct: 248 RNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQM 307

Query: 190 QSLGIAADSYTFSCVLKCLAVVG--------------------------------NSRRV 217
           QS  +  D YT   VL   A +G                                    V
Sbjct: 308 QSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSV 367

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
             A ++F  +  +D V WN M+ G   NG A+    +F  +   G   D  T + +L GC
Sbjct: 368 TQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGC 427

Query: 278 ANCGALMFGRAVHAFALKACFS--KEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVV 334
            + G +  GR      +K  FS    I     ++D+  + G L+ A ++   M  + + V
Sbjct: 428 THGGFVNEGRQFFN-NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAV 486

Query: 335 SWTSMIAG 342
            W +++ G
Sbjct: 487 VWGALLGG 494


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/774 (35%), Positives = 429/774 (55%), Gaps = 50/774 (6%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y   L+ C DL+S+   +++H  I  SG    +  LG+++V  +  CG +   R  F+ I
Sbjct: 30  YRDALRQCQDLESV---RQIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARAAFDAI 84

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYTFSCV------------ 204
                + W  ++  Y++ G+++ +L L+K+M  Q   +   +   +C             
Sbjct: 85  ARKNDYSWGSMLTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLGACASIKALEEGKAIH 144

Query: 205 --------LKCLAVVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                   LK   ++ NS          ++DA +LF+ +S R V SWN MI+ Y  +G  
Sbjct: 145 SRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHF 204

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           E+ + ++++M        + T  +VLS C+N G L  GR +HA         ++S  N L
Sbjct: 205 EEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNAL 261

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           L MY++C  LD A ++F+++  R VVSW++MIA +A   +FD AI  +  M  EG+ P+ 
Sbjct: 262 LTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNY 321

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           Y   S+L ACA  G L  G+ VHD I  N  + +L    AL+D+Y   GS+ +A S+F+Q
Sbjct: 322 YTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQ 381

Query: 429 MPVKDIVSWNTMIGA----------LDLFVAM--LQNFEPDGVTMACILPACASLAALER 476
           +  +D   W  +IG           L+L+  M          +  +C++ ACASL A   
Sbjct: 382 IENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFAD 441

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
            R+ H  I   G+ +D  +A ++V+MY + G L  AR +FD + ++D ++WT +IAGY  
Sbjct: 442 ARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAK 501

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG    A+  + +M   G EP E++F+ VLYACSH+GL ++G + F  ++ +  + P + 
Sbjct: 502 HGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIA 561

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HY+C++DLLSR G LS+A   I  MPV P+   W SLL   RIH +VK A   A  + +L
Sbjct: 562 HYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKL 621

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           +P +   YVLL+NV+A       +  +R  +  RG+KK  G SWIE+  +++ F  G +S
Sbjct: 622 DPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNS 681

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP  ++I + L+RL  ++K  GY P++   L +  E EKE+ L  HSEKLA+AFG++   
Sbjct: 682 HPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATA 741

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            G T+R+   LR+C DCH   KF+S  ARREI++RDS+RFH F+DG+CSC  +W
Sbjct: 742 PGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 252/512 (49%), Gaps = 52/512 (10%)

Query: 73  FCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG 132
           + + G+   A++ LY     + +   Y ++L  CA +K+LE+GK +HS I  +  +  D 
Sbjct: 99  YAQNGHYRAALD-LYKRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDV 157

Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
           +L + L+ M+  CG L++ +R+F ++    V  WN ++  Y+++G+F+E++ L++ M   
Sbjct: 158 ILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMD-- 215

Query: 193 GIAADSYTFSCVLKC---LAVVGNSRRV-----------------------------KDA 220
            +     TF+ VL     L ++   R++                              DA
Sbjct: 216 -VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDA 274

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
            K+F  L  RDVVSW+ MI+ +    + ++ +E + +M   G   +  T  +VL  CA+ 
Sbjct: 275 AKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASV 334

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
           G L  GRAVH   L   +   +     L+D+Y+  G LD A  +F+++  R    WT +I
Sbjct: 335 GDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLI 394

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITS-ILHACACDGLLEIGKDVHDYIKENDM 399
            GY+++G   G + L+R M      P    I S ++ ACA  G     +  H  I+ + M
Sbjct: 395 GGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGM 454

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
            S   ++ +L++MY++ G++  A  VF++M  +D ++W T+I           AL L+  
Sbjct: 455 ISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKE 514

Query: 450 M-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN--AIVDMYVKC 506
           M L+  EP  +T   +L AC+     E+G+++   I +   +   N+A+   I+D+  + 
Sbjct: 515 MELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISI-QSDYAMHPNIAHYSCIIDLLSRA 573

Query: 507 GVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           G L  A  L + +P + + ++W+ ++    +H
Sbjct: 574 GRLSDAEELINAMPVEPNDVTWSSLLGASRIH 605



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 4/139 (2%)

Query: 70  IGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           IG + + G+    +E+   + ++ K       Y  ++  CA L +  D ++ HS I   G
Sbjct: 394 IGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADG 453

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
           + I D VL + LV M+   G+L+  R+VF+K+ +     W  L+  Y+K G    +L L+
Sbjct: 454 M-ISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLY 512

Query: 187 KKMQSLGIAADSYTFSCVL 205
           K+M+  G      TF  VL
Sbjct: 513 KEMELEGAEPSELTFMVVL 531


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/674 (39%), Positives = 387/674 (57%), Gaps = 14/674 (2%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+  ++ T +FK+   L   M S  I  ++   +   K  A       +  A  +FD + 
Sbjct: 65  LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNT--KLAAFYAGCGLMSQAEVIFDGIV 122

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            ++   WN MI GY +NG+  K L +++EML  G   D  T   VL  C +   +  GR 
Sbjct: 123 LKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRR 182

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VH+  +      +I   N+LL MY+K GD+  A  VF++M ER + SW +MI+GYA+   
Sbjct: 183 VHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNAD 242

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS-SLYVSN 407
              A  +F  M + G+  D   +  +L ACA    ++ GK +H Y   N + + + + +N
Sbjct: 243 SGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTN 302

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEP 456
           +L++MY  C  M DA  +F ++  KD VSWN+MI           +L LF  M L    P
Sbjct: 303 SLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGP 362

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           D VT   +L AC  +AAL  G  IH Y+++ G  A+  V  A+VDMY KCG L  +R +F
Sbjct: 363 DQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVF 422

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           D +P K L+SW+ M+AGYG+HG G +AI+  + M+   + PD   F S+L ACSH+GLV 
Sbjct: 423 DEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVV 482

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           EG   F  M  E N++P L HY+CMVDLL R G+L EAY  I  M + P + IW +LL  
Sbjct: 483 EGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTA 542

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
            R+H  +KLAE  A+ VF++ P     Y+ L+N+YA  ++W++V+++R  + R+GLKK+P
Sbjct: 543 SRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSP 602

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
           GCS+IE+   V+ F+ G  SH   + I + L  L+ ++K  GY P T     + +E  KE
Sbjct: 603 GCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKE 662

Query: 757 VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
             L  HSE+LA+AF ++N   G  IR+TKNLRVCGDCH + K +S+   REI++RD +RF
Sbjct: 663 KMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRF 722

Query: 817 HHFKDGRCSCRGFW 830
           HHF  G CSC  +W
Sbjct: 723 HHFIKGFCSCGDYW 736



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 256/535 (47%), Gaps = 68/535 (12%)

Query: 62  KTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKID----TKTYC-SILQLCADLKSLEDGK 116
           + + YN+    F + G++ + +E   S  +  +     T   C ++LQ   + KS + G+
Sbjct: 21  RDREYNSFTSHFSQ-GDVAQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQ 79

Query: 117 KVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
           ++H+ +    I+ ++  L +KL   +  CG + +   +F+ I     F+WN ++  Y+  
Sbjct: 80  QLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASN 139

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRRVKD-------------- 219
           G   +SL L+++M   G  AD++T+  VLK    L +V   RRV                
Sbjct: 140 GLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVG 199

Query: 220 ---------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                          A  +FD +++RD+ SWN MISGY  N  +     VF  M   G  
Sbjct: 200 NSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLF 259

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK-EISFNNTLLDMYSKCGDLDGAIR 323
            D  T++ +LS CA+  A+  G+ +H +A++         F N+L++MY  C  +  A R
Sbjct: 260 ADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARR 319

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           +FE++  +  VSW SMI GYAR G    ++RLFR M  +G  PD     ++L AC     
Sbjct: 320 LFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAA 379

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
           L  G  +H Y+ +    ++  V  AL+DMY+KCGS+A +  VF++MP K +VSW+ M+  
Sbjct: 380 LRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAG 439

Query: 444 LDLF------VAMLQNFE-----PDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
             L       +++L   +     PD      IL AC+    +  G+EI      + +  +
Sbjct: 440 YGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIF-----YKMEKE 494

Query: 493 RNVANAI------VDMYVKCGVL----VLARSLFDMIPAKDLISWTIMIAGYGMH 537
            NV  A+      VD+  + G L    V+ R++ ++ P  D+  W  ++    +H
Sbjct: 495 YNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTM-EIKPTSDI--WAALLTASRLH 546


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 257/629 (40%), Positives = 386/629 (61%), Gaps = 21/629 (3%)

Query: 223 LFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           LF++  D+ +V SWN +I+    +G + + L  F  M  L    + +T    +  C+   
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            L  GR  H  AL   F  ++  ++ L+DMYSKCG+L  A  +F+++  R++VSWTSMI 
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226

Query: 342 GYAREGVFDGAIRLFRGMVRE--GIEPD------VYAITSILHACACDGLLEIGKDVHDY 393
           GY +      A+ LF+  + E  G E D        A+ S+L AC+      I + VH +
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           + +   +  L V N LMD YAKCG +  +  VF+ M  +D++SWN++I           +
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346

Query: 444 LDLFVAMLQNFEPD--GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           +++F  M+++ E +   VT++ +L ACA   +   G+ IH  +++ G+ ++  V  +I+D
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIID 406

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KCG + +AR  FD +  K++ SW+ M+AGYGMHG   +A+  F +M  AG++P+ ++
Sbjct: 407 MYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYIT 466

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           F+SVL ACSH+GL++EGW +F  M +E ++EP +EHY CMVDLL R G L EA+  I+ M
Sbjct: 467 FVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGM 526

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
            + PD  +WG+LL  CR+H  V L E  A  +FEL+P N GYYVLL+N+YA+A +WE+V+
Sbjct: 527 KLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVE 586

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           ++R  +   GL K PG S ++IKG+V++F+ G   HP  +KI   L++L ++++  GY P
Sbjct: 587 RMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVP 646

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
                L +    EKE+ L  HSEKLA+AFGI+N   G TI + KNLRVCGDCH   KF+S
Sbjct: 647 DMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFIS 706

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K   REIV+RDS RFHHF+DG CSC  +W
Sbjct: 707 KIVDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 226/444 (50%), Gaps = 65/444 (14%)

Query: 154 VFNK-IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CLAVV 211
           +FNK +D   VF WN ++ E +++G+  E+L  F  M+ L +  +  TF C +K C A++
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 212 G-NSRR------------------------------VKDAHKLFDELSDRDVVSWNCMIS 240
             +S R                              ++DA  LFDE+S R++VSW  MI+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226

Query: 241 GYIANGVAEKGLEVFKEML--------NLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           GY+ N  A + L +FKE L        +    VD   MV+VLS C+          VH F
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
            +K  F  ++   NTL+D Y+KCG+L  + RVF+ M ER V+SW S+IA YA+ G+   +
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346

Query: 353 IRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           + +F  MV++G I  +   ++++L ACA  G   +GK +HD + +  ++S+++V  +++D
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIID 406

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVT 460
           MY KCG +  A   F++M  K++ SW+ M+           AL++F  M +   +P+ +T
Sbjct: 407 MYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYIT 466

Query: 461 MACILPACASLAALERGREIHGY-ILRHGISADRNVAN--AIVDMYVKCGVLVLARSLFD 517
              +L AC+    LE G   H +  + H    +  V +   +VD+  + G L   +  FD
Sbjct: 467 FVSVLAACSHAGLLEEG--WHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYL---KEAFD 521

Query: 518 MIPA----KDLISWTIMIAGYGMH 537
           +I       D + W  ++    MH
Sbjct: 522 LIKGMKLRPDFVVWGALLGACRMH 545



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 40/286 (13%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D     S+L  C+ +      + VH  + + G   D GV  + L+  +  CG+L   RR
Sbjct: 259 VDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENT-LMDAYAKCGELGVSRR 317

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVG 212
           VF+ +    V  WN ++  Y++ G   ES+ +F +M   G I  ++ T S VL   A  G
Sbjct: 318 VFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSG 377

Query: 213 NSR--------------------------------RVKDAHKLFDELSDRDVVSWNCMIS 240
           + R                                +V+ A K FD + +++V SW+ M++
Sbjct: 378 SQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVA 437

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF-ALKACFS 299
           GY  +G A++ LEVF EM   G   +  T V+VL+ C++ G L  G   H F A+   F 
Sbjct: 438 GYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGW--HWFKAMSHEFD 495

Query: 300 KE--ISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAG 342
            E  +     ++D+  + G L  A  + + M  R   V W +++  
Sbjct: 496 VEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA 541


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/622 (39%), Positives = 382/622 (61%), Gaps = 11/622 (1%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +F ++ + D  ++N MI G+       + + +FKEM       D  T   +L  C+ 
Sbjct: 77  AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             AL  G  +HA  +K  F       NTL+ MY+ CG+++ A RVF++M ER+V +W SM
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
            AGY + G ++  ++LF  M+   I  D   + S+L AC     LE+G+ ++ Y++E  +
Sbjct: 197 FAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGL 256

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
           + +  +  +L+DMYAKCG +  A  +F+QM  +D+V+W+ MI           ALDLF  
Sbjct: 257 KGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHE 316

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M + N +P+ +TM  IL +CA L ALE G+ +H +I +  +     +  A++D Y KCG 
Sbjct: 317 MQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGS 376

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +  +  +F  +P K+++SWT++I G   +G G  A+  F  M +  +EP++V+FI VL A
Sbjct: 377 VESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSA 436

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSH+GLVDEG   F  M  +  IEP++EHY CMVD+L R G + EA++FI+ MP+ P+A 
Sbjct: 437 CSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAV 496

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           IW +LL  C++H  V++ E+  + +  LEP ++G Y+LL+N+YA   +WE+  K+R ++ 
Sbjct: 497 IWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMK 556

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
            +G+KK PGCS IE+ G ++ F A  + H  +++I + ++ +  ++K  GY P T  A +
Sbjct: 557 EKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARL 616

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           +A+E +KE ++  HSEKLA+AFG++  P G TIR+TKNLRVC DCH   K +SK   REI
Sbjct: 617 DAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREI 676

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           V+RD  RFHHFK+G CSC  +W
Sbjct: 677 VVRDRTRFHHFKEGSCSCNDYW 698



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 246/484 (50%), Gaps = 53/484 (10%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL---VFMFVTCGDLKEGRRVFNKI 158
           IL+ C   K++ D  ++H+ + ++ +++   V  + L     +  T  D      +F +I
Sbjct: 30  ILEQC---KTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDY--AVSIFRQI 84

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----------- 207
           D      +N+++  ++   +  E++ LFK+M    +  D +TF C+LK            
Sbjct: 85  DEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGE 144

Query: 208 ---------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                                + +  N   V+ A ++FDE+S+R+V +WN M +GY  +G
Sbjct: 145 QIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSG 204

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
             E+ +++F EML L    D  T+V+VL+ C     L  G  ++ +  +       +   
Sbjct: 205 NWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLIT 264

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           +L+DMY+KCG +D A R+F++M  R VV+W++MI+GY++      A+ LF  M +  I+P
Sbjct: 265 SLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDP 324

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           +   + SIL +CA  G LE GK VH +IK+  M+ ++ +  ALMD YAKCGS+  +  VF
Sbjct: 325 NEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVF 384

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALE 475
            +MPVK+++SW  +I           AL+ F  ML+ N EP+ VT   +L AC+    ++
Sbjct: 385 GKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVD 444

Query: 476 RGREIHGYILRH-GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
            GR++   + R  GI         +VD+  + G++  A      +P + + + W  ++A 
Sbjct: 445 EGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLAS 504

Query: 534 YGMH 537
             +H
Sbjct: 505 CKVH 508



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 196/383 (51%), Gaps = 35/383 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  IL++C+ L++L +G+++H++I + G     G + + L+ M+  CG+++  RRV
Sbjct: 123 DEFTFPCILKVCSRLQALSEGEQIHALIMKCGFG-SHGFVKNTLIHMYANCGEVEVARRV 181

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL------ 208
           F+++    V  WN +   Y+K+GN++E + LF +M  L I  D  T   VL         
Sbjct: 182 FDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADL 241

Query: 209 -------------AVVGNSR-------------RVKDAHKLFDELSDRDVVSWNCMISGY 242
                         + GN               +V  A +LFD++  RDVV+W+ MISGY
Sbjct: 242 ELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGY 301

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
                  + L++F EM     + +  TMV++LS CA  GAL  G+ VH F  K      +
Sbjct: 302 SQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTV 361

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
           +    L+D Y+KCG ++ +I VF KM  ++V+SWT +I G A  G    A+  F  M+ +
Sbjct: 362 TLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEK 421

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMAD 421
            +EP+      +L AC+  GL++ G+D+   +  +  ++  +     ++D+  + G + +
Sbjct: 422 NVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEE 481

Query: 422 AESVFNQMPVK-DIVSWNTMIGA 443
           A      MP++ + V W T++ +
Sbjct: 482 AFQFIKNMPIQPNAVIWRTLLAS 504



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 167/406 (41%), Gaps = 71/406 (17%)

Query: 64  KNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSI 121
           + +N+    + + GN E+ +++ +   +  I  D  T  S+L  C  L  LE G+ ++  
Sbjct: 191 RTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRY 250

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           + E G+  +  ++ S LV M+  CG +   RR+F+++D   V  W+ ++  YS+    +E
Sbjct: 251 VEEKGLKGNPTLITS-LVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCRE 309

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------- 221
           +L LF +MQ   I  +  T   +L   AV+G     K  H                    
Sbjct: 310 ALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMD 369

Query: 222 ------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                       ++F ++  ++V+SW  +I G  +NG  +K LE F  ML      +  T
Sbjct: 370 FYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVT 429

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            + VLS C++ G +  GR      L    S++                            
Sbjct: 430 FIGVLSACSHAGLVDEGR-----DLFVSMSRDFGI------------------------- 459

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           E  +  +  M+    R G+ + A +  + M    I+P+     ++L +C     +EIG++
Sbjct: 460 EPRIEHYGCMVDILGRAGLIEEAFQFIKNM---PIQPNAVIWRTLLASCKVHKNVEIGEE 516

Query: 390 -VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
            +   I      S  Y+   L ++YA  G   DA  V  +M  K I
Sbjct: 517 SLKQLIILEPTHSGDYI--LLSNIYASVGRWEDALKVRGEMKEKGI 560


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 266/773 (34%), Positives = 438/773 (56%), Gaps = 46/773 (5%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  + L+ C+   +L+ GK++H+   + G+++D  V GS LV ++  CG+++   ++F  
Sbjct: 215 TLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV-GSALVDLYAKCGEIELASKMFIG 273

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +       WN+L++ Y++ G+    L LF  M  L +  + +T + VLK  A   N ++ 
Sbjct: 274 MPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG 333

Query: 218 KDAHKL--------------------------------FDELSDRDVVSWNCMISGYIAN 245
           +  H L                                F  +   D+V W+ +I+     
Sbjct: 334 QVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQ 393

Query: 246 GVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           G +E+ +++F  ++ LG  + +  T+ ++LS   N G L +G+++HA   K  F  +++ 
Sbjct: 394 GQSEESIKLF-HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAV 452

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
           +N L+ MY K G +    +++E M +R ++SW + ++G    G++D  + +F  M+ EG 
Sbjct: 453 SNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGF 512

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
            P++Y   SIL +C+C   +  G+ VH +I +N +  + +V  AL+DMYAKC  + DA+ 
Sbjct: 513 IPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADV 572

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAA 473
            FN++ V+D+ +W  +I           AL+ F  M Q   +P+  T+A  L  C+SLA+
Sbjct: 573 AFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLAS 632

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           LE G+++H  + + G  +D  V +A+VDMY KCG +  A +LF+ +  +D I+W  +I G
Sbjct: 633 LEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICG 692

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           Y  +G G  A+  F  M   GI PD V+F  +L ACSH GLV+EG   FN M  +  I P
Sbjct: 693 YAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISP 752

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            ++H ACMVD+L R G   E   FI+ M ++ +A IW ++L   ++H+ + L EK A  +
Sbjct: 753 TVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKL 812

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
           FEL+P+    Y+LL+N++A   +W++VK++R  +S +G+KK PGCSW+E  G+V+ FV+ 
Sbjct: 813 FELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSH 872

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
             SHP  ++I   L  L  E+    Y PKT Y L N  E EK+  L  HSE+LA+ F ++
Sbjct: 873 DYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALI 932

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           +  + + IR+ KNLR+C DCH++ K +S    +EIV+RD  RFHHFK+G CSC
Sbjct: 933 STSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 182/671 (27%), Positives = 312/671 (46%), Gaps = 60/671 (8%)

Query: 9   TTNFLFFSPPNQSYGKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNA 68
           TT FLFF     S+  +     PS    I  SK    C    +             N+  
Sbjct: 39  TTRFLFFPIRRSSFKVQLDPRCPSDSIGISMSKGQFGCEFKNV-----------VHNFPY 87

Query: 69  EIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIV 128
                 +     K  +V +SS+K     K Y S+L+ CA  +SL   K +H +I +  ++
Sbjct: 88  RFNFEHQKTEDAKGNQVCWSSKKK---LKYYSSMLRECASKRSLGVAKAIHGLIVKD-VI 143

Query: 129 IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
             D  L   LV ++  C      R V  K+ +  V  W  L+      G   +S+YLF++
Sbjct: 144 NPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203

Query: 189 MQSLGIAADSYTFSCVLK----CLAV--------------------VGNSR--------R 216
           MQ+ GI  + +T +  LK    C+A+                    VG++          
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++ A K+F  + +++ V+WN +++GY   G     L++F  M+ L    +  T+ TVL G
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CAN   L  G+ +H+  +K  +         L+DMYSKCG    AI VF+ + +  +V W
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           +++I    ++G  + +I+LF  M      P+ Y I S+L A    G L+ G+ +H  + +
Sbjct: 384 SALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK 443

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDL 446
              ++ + VSNAL+ MY K G + D   ++  M  +D++SWN  +            L +
Sbjct: 444 YGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTI 503

Query: 447 FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  ML+  F P+  T   IL +C+ L  +  GR++H +I+++ +  +  V  A++DMY K
Sbjct: 504 FYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAK 563

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           C  L  A   F+ +  +DL +WT++I  Y     G  A+  F  M+Q G++P+E +    
Sbjct: 564 CMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGC 623

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L  CS    ++ G +  +M+    ++       A +VD+ ++ G + EA    E + +  
Sbjct: 624 LSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSA-LVDMYAKCGCMEEAEALFEAL-IRR 681

Query: 626 DATIWGSLLCG 636
           D   W +++CG
Sbjct: 682 DTIAWNTIICG 692



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 236/490 (48%), Gaps = 46/490 (9%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T  ++L+ CA+ K+L+ G+ +HS+I + G   ++  +G  LV M+  CG   +  
Sbjct: 311 KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNE-FIGCGLVDMYSKCGLAIDAI 369

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            VF  I    + +W+ L+    + G  +ES+ LF  M+      + YT   +L      G
Sbjct: 370 GVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTG 429

Query: 213 NSRR--------------------------------VKDAHKLFDELSDRDVVSWNCMIS 240
           N +                                 V D  KL++ + DRD++SWN  +S
Sbjct: 430 NLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLS 489

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G    G+ ++ L +F  ML  GF  ++ T +++L  C+    + +GR VHA  +K     
Sbjct: 490 GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDD 549

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                  L+DMY+KC  L+ A   F ++  R + +WT +I  YA+    + A+  FR M 
Sbjct: 550 NNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQ 609

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           +EG++P+ + +   L  C+    LE G+ +H  + ++   S ++V +AL+DMYAKCG M 
Sbjct: 610 QEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCME 669

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVTMACILPACA 469
           +AE++F  +  +D ++WNT+I           AL  F  ML +   PDGVT   IL AC+
Sbjct: 670 EAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACS 729

Query: 470 SLAALERGREIHGYILRH-GISADRNVANAIVDMYVKCGVL-VLARSLFDMIPAKDLISW 527
               +E G+E    + R  GIS   +    +VD+  + G    L   +  M  +++ + W
Sbjct: 730 HQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIW 789

Query: 528 TIMIAGYGMH 537
             ++    MH
Sbjct: 790 ETVLGASKMH 799


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/769 (35%), Positives = 428/769 (55%), Gaps = 42/769 (5%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           L L   + +L    + H+ I  +G+  +D V  +KL         + +   +F+ I N  
Sbjct: 14  LTLINRVSTLHQLNQTHAQIILNGLH-NDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPD 72

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYTFSCVLKCLAV----------- 210
           +F++N+L+  +S   +   ++ L+  + +S  +  D++T++ V+   +            
Sbjct: 73  LFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS 132

Query: 211 ----------VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL 252
                     VG++         RV  A K+FD + +RD V WN M+SG + N   ++ +
Sbjct: 133 IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAI 192

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
            +F +M+  G   D  T+  VL G A    L  G  +   A+K  F         L  +Y
Sbjct: 193 LIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLY 252

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           SKCG+++ A  +F ++G+  +VS+ +MI+GY      + ++RLF+ ++  G + +  +I 
Sbjct: 253 SKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIV 312

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
            ++      G L + + +H +  ++ + S+  VS AL  +Y++   +  A  +F++   K
Sbjct: 313 GLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEK 372

Query: 433 DIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIH 481
            + SWN MI           A+ LF  M +    P+ VT+  IL ACA L AL  G+ +H
Sbjct: 373 SLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVH 432

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
             I R    ++  V+ A++DMY KCG +  A+ LF M+P K+ ++W  MI+GYG+HG+G 
Sbjct: 433 DLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGH 492

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
           +A+  FN+M  + + P  V+F+SVLYACSH+GLV EG   F  M ++   EP  EHYACM
Sbjct: 493 EALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACM 552

Query: 602 VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNT 661
           VDLL R GNL +A  FI  MPV P   +WG+LL  C IH +  LA   ++ +FEL+P N 
Sbjct: 553 VDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNV 612

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK 721
           GYYVLL+N+Y+  + + E   +R  + RR L K PGC+ IE+   ++IF +G  SHP A 
Sbjct: 613 GYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQAT 672

Query: 722 KIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
            I ++L++L  +M+  G+  +T  AL + +E EKE+ +  HSEKLA+AFG++    G  I
Sbjct: 673 AIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEI 732

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           R+ KNLRVC DCH   KF+SK   R IV+RD+NRFHHFKDG CSC  +W
Sbjct: 733 RIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/301 (19%), Positives = 128/301 (42%), Gaps = 40/301 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           +YNA I  +      E ++    E+L S EK  +++ +   ++ +      L   + +H 
Sbjct: 275 SYNAMISGYTCNNETESSVRLFKELLVSGEK--VNSSSIVGLIPVFFPFGHLHLTRCIHG 332

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
             C    V+ +  + + L  ++    +++  R +F++     +  WN ++  Y++ G  +
Sbjct: 333 F-CTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTE 391

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG---------------------------- 212
           +++ LF++MQ   +  +  T + +L   A +G                            
Sbjct: 392 KAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALI 451

Query: 213 ----NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   + +A +LF  + +++ V+WN MISGY  +G   + L +F EML+   +    
Sbjct: 452 DMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGV 511

Query: 269 TMVTVLSGCANCGALMFGRAV-HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T ++VL  C++ G +  G  +  +      F         ++D+  + G+LD A+    K
Sbjct: 512 TFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRK 571

Query: 328 M 328
           M
Sbjct: 572 M 572


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 290/834 (34%), Positives = 444/834 (53%), Gaps = 57/834 (6%)

Query: 47  TINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQ 104
           ++  +    S+  V    ++   I  + E G  ++A+ + +    E  + D  T+ ++L+
Sbjct: 77  SLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLK 136

Query: 105 LCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVF 164
            CA L  L  G+ +H+ I ESG+     VL + L+ ++ +CG +     +F +++   V 
Sbjct: 137 ACARLGDLSQGRSIHAWIVESGLE-GKSVLANLLLHIYGSCGCVASAMLLFERMERDLVS 195

Query: 165 IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK------ 218
            WN  +   +++G+   +L LF++MQ  G+     T    L   A +  +R +       
Sbjct: 196 -WNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRES 254

Query: 219 -----------------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                                   A ++FD  ++RDVVSWN M+  Y  +G   +   +F
Sbjct: 255 GLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLF 314

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
             ML+ G      T+V   +GC++   L FGR +HA AL+    ++I   N LLDMY++C
Sbjct: 315 ARMLHEGIPPSKVTLVNASTGCSS---LRFGRMIHACALEKGLDRDIVLGNALLDMYTRC 371

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G  + A  +FE +   + VSW +MIAG +++G    A+ LF+ M  EG+ P      ++L
Sbjct: 372 GSPEEARHLFEGI-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLL 430

Query: 376 HACACDG----LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            A A +      +  G+ +H  I      S   +  A++ MYA CG++ +A + F +  +
Sbjct: 431 EAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAM 490

Query: 432 KD---IVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERG 477
           +D   +VSWN +I           AL  F  M L    P+ +T   +L ACA  AAL  G
Sbjct: 491 EDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG 550

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA-KDLISWTIMIAGYGM 536
             +H ++   G+ ++  VA A+  MY +CG L  AR +F+ +   +D++ +  MIA Y  
Sbjct: 551 VIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQ 610

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           +G   +A+  F  M+Q G  PDE SF+SVL ACSH GL DEGW  F  MR    I P  +
Sbjct: 611 NGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSED 670

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HYAC VD+L R G L++A   I  M V P   +W +LL  CR + +V         V EL
Sbjct: 671 HYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVREL 730

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           +P +   YV+L+N+ A A KW+E  ++R ++  RGL+K  G SWIEIK +V+ FVAG  S
Sbjct: 731 DPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRS 790

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP +++I   L+RL  E++  GY P TR  L   DE EKE  LC HSE+LA+A G+++  
Sbjct: 791 HPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMS-S 849

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +  T+RV KNLRVC DCH   KF+SK   +EIV+RD++RFHHF DG CSC  +W
Sbjct: 850 STDTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 277/598 (46%), Gaps = 60/598 (10%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L SS            +L+   D + L  G+++H+ I   G+   +  LG+ L+ +++ C
Sbjct: 19  LPSSSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGL---EEELGNHLLRLYLKC 75

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
             L +   VF++++      W  ++  Y++ G  K ++++F +MQ  G+  D+ TF  VL
Sbjct: 76  ESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVL 135

Query: 206 KCLAVVGNSRRVKDAHK-------------------------------LFDELSDRDVVS 234
           K  A +G+  + +  H                                L  E  +RD+VS
Sbjct: 136 KACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERMERDLVS 195

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           WN  I+    +G  +  LE+F+ M   G      T+V  LS CA    +   RA+H+   
Sbjct: 196 WNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVR 252

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           ++   + +  +  L   Y++ G LD A  VF++  ER VVSW +M+  YA+ G    A  
Sbjct: 253 ESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAAL 312

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LF  M+ EGI P    + +    C+    L  G+ +H    E  +   + + NAL+DMY 
Sbjct: 313 LFARMLHEGIPPSKVTLVNASTGCSS---LRFGRMIHACALEKGLDRDIVLGNALLDMYT 369

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMAC 463
           +CGS  +A  +F  +P  + VSWNTMI           AL+LF  M L+   P   T   
Sbjct: 370 RCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLN 428

Query: 464 ILPACAS----LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD-- 517
           +L A AS      A+  GR++H  I+  G +++  +  A+V MY  CG +  A + F   
Sbjct: 429 LLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRG 488

Query: 518 -MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
            M    D++SW  +I+    HG G  A+  F  M   G+ P++++ ++VL AC+ +  + 
Sbjct: 489 AMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALT 548

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           EG    + +R+   +E  +     +  +  R G+L  A    E + V  D  I+ +++
Sbjct: 549 EGVIVHDHLRHS-GMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 207/451 (45%), Gaps = 38/451 (8%)

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           A +V +L    +   L  GR +HA  +     +E+   N LL +Y KC  L     VF +
Sbjct: 30  AHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSR 87

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           +  R   SWT++I  Y   G    AI +F  M +EG+  D     ++L ACA  G L  G
Sbjct: 88  LEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG 147

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
           + +H +I E+ ++    ++N L+ +Y  CG +A A  +F +M  +D+VSWN  I      
Sbjct: 148 RSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQS 206

Query: 443 -----ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL+LF  M L+   P  +T+   L  CA    + + R IH  +   G+     V+
Sbjct: 207 GDLDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVS 263

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
            A+   Y + G L  A+ +FD    +D++SW  M+  Y  HG   +A   F  M   GI 
Sbjct: 264 TALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIP 323

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA----CMVDLLSRTGNLS 612
           P +V+ ++    CS         RF  M+ + C +E  L+        ++D+ +R G+  
Sbjct: 324 PSKVTLVNASTGCS-------SLRFGRMI-HACALEKGLDRDIVLGNALLDMYTRCGSPE 375

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE---PDNTGYYVLLAN 669
           EA    E +P   +A  W +++ G     ++K A ++ + + +LE   P    Y  LL  
Sbjct: 376 EARHLFEGIP--GNAVSWNTMIAGSSQKGQMKRALELFQRM-QLEGMAPVRATYLNLLEA 432

Query: 670 VYA---EAEKWEEVKKLREKISRRGLKKNPG 697
           V +   EA    E +KL  +I   G    P 
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPA 463


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 254/627 (40%), Positives = 382/627 (60%), Gaps = 14/627 (2%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + DA ++F     ++VVSW  +ISG   N    + ++VF+EM    F  +  T+ +VL  
Sbjct: 72  LADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPA 131

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
            AN G +   ++VH F ++  F   +     L+DMYSK G +  A ++FE M ER+VVSW
Sbjct: 132 FANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSW 191

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++++GY+  G  + AI LF  M R+G+  D Y I S++ A    G L++G  +H +I  
Sbjct: 192 NAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIR 251

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
              ++  ++  ALMD+Y     + DA  VF++M VKD+ +W  M+           A+  
Sbjct: 252 TGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKH 311

Query: 447 FVAML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           F  ML  QN + D + +  IL +C+   AL++GR +H   ++   + +  V +A++DMY 
Sbjct: 312 FNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYA 371

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
            CG L  A+  F  +  KD++ W  MIAG GM+G+G DAI  F  M+ +G++PDE +F+S
Sbjct: 372 NCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVS 431

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           VLYACSH+G+V EG + F  M    +  P L+HYAC++D+L R G L  AY FI  MP  
Sbjct: 432 VLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ 491

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           PD  ++ +LL  CRIH  +KL  ++++ +FE+EP++ GYYVLL+N+YA A  WE VK  R
Sbjct: 492 PDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTR 551

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
             +  + LKK+PG S IEI  ++  F+AG   HP   KIE +LK L L++K+ GY P T 
Sbjct: 552 ASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTN 611

Query: 745 YALIN-ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
             L + +D+M+K++ L  HSEK+A+AFG++    G  IR+TKNLR C DCH  +KF+SK 
Sbjct: 612 VLLQDVSDDMKKDI-LYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKV 670

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             R +V++D+NRFH F+DG CSCR +W
Sbjct: 671 FGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 242/489 (49%), Gaps = 52/489 (10%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           +++ SIL+   DLK L+   ++H+ I  SG+   +  L + L+  +V CG L + +++F+
Sbjct: 25  QSHASILRKLKDLKPLQ---QIHAQIITSGLT-HNTFLSNSLMNAYVYCGLLADAKQIFH 80

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
                 V  W +L+   +K   F E++ +F++M       ++ T S VL   A +G  R 
Sbjct: 81  HTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRI 140

Query: 217 VKDAH--------------------------------KLFDELSDRDVVSWNCMISGYIA 244
            K  H                                +LF+ +S+R+VVSWN ++SGY  
Sbjct: 141 AKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSD 200

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           +G +E+ +++F  M   G  VD  T+++++    + G L  G  +H F ++  +  +   
Sbjct: 201 HGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHI 260

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EG 363
              L+D+Y     +D A RVF +M  + V +WT M+ G++    +D AI+ F  M+  + 
Sbjct: 261 KTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQN 320

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           ++ D   +  IL +C+  G L+ G+ VH    +    ++++V +A++DMYA CG++ DA+
Sbjct: 321 LKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAK 380

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLA 472
             F  M  KD+V WN MI           A+DLF+ M     +PD  T   +L AC+   
Sbjct: 381 RFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAG 440

Query: 473 ALERGREIHGYILR--HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTI 529
            +  G +I  ++++  H I   ++ A  ++D+  + G L  A S  + +P + D   ++ 
Sbjct: 441 MVYEGLQIFYHMVKTSHDIPNLQHYA-CVIDILGRAGQLDAAYSFINNMPFQPDFDVYST 499

Query: 530 MIAGYGMHG 538
           ++    +HG
Sbjct: 500 LLGACRIHG 508



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 186/362 (51%), Gaps = 14/362 (3%)

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           + +HA  + +  +     +N+L++ Y  CG L  A ++F     ++VVSWT +I+G A+ 
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKN 100

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
             F  AI +FR M     +P+   I+S+L A A  GL+ I K VH +      + +++V 
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFE 455
            AL+DMY+K G M  A  +F  M  +++VSWN ++           A+DLF  M  +   
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
            D  T+  ++PA  S+  L+ G  IHG+I+R G   D+++  A++D+YV    +  A  +
Sbjct: 221 VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRV 280

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ-AGIEPDEVSFISVLYACSHSGL 574
           F  +  KD+ +WT+M+ G+        AI  FN M     ++ D +  + +L +CSHSG 
Sbjct: 281 FSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGA 340

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           + +G R   +    C     +   + ++D+ +  GNL +A RF   M    D   W +++
Sbjct: 341 LQQGRRVHALAIKTC-FANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNAMI 398

Query: 635 CG 636
            G
Sbjct: 399 AG 400



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 11/192 (5%)

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
           Q   P   + A IL     L  L+   +IH  I+  G++ +  ++N++++ YV CG+L  
Sbjct: 18  QRLCPLAQSHASILRKLKDLKPLQ---QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLAD 74

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A+ +F   P K+++SWTI+I+G   +    +AI  F +M     +P+ V+  SVL A ++
Sbjct: 75  AKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFAN 134

Query: 572 SGLVDEGWR---FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
            GL+        F+    +E N+  +      +VD+ S+ G +  A +  E M    +  
Sbjct: 135 LGLIRIAKSVHCFWVRGGFEGNVFVE----TALVDMYSKFGCMGVARQLFESMS-ERNVV 189

Query: 629 IWGSLLCGCRIH 640
            W +++ G   H
Sbjct: 190 SWNAIVSGYSDH 201



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 108/238 (45%), Gaps = 17/238 (7%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           +  K+D+     IL  C+   +L+ G++VH++  ++    ++  +GS ++ M+  CG+L+
Sbjct: 319 QNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFA-NNIFVGSAVIDMYANCGNLE 377

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
           + +R F  +    V  WN ++      G   +++ LF +M+  G+  D  TF  VL   +
Sbjct: 378 DAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACS 437

Query: 210 VVGNSRRVKDAHKLFDEL--SDRDVVS---WNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
             G    V +  ++F  +  +  D+ +   + C+I      G A +    +  + N+ F 
Sbjct: 438 HAG---MVYEGLQIFYHMVKTSHDIPNLQHYACVID---ILGRAGQLDAAYSFINNMPFQ 491

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHA--FALKACFSKEISFNNTLLDMYSKCGDLDG 320
            D     T+L  C   G +  G  +    F ++     +  +   L +MY+  G+ +G
Sbjct: 492 PDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEP---NDAGYYVLLSNMYALAGNWEG 546


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 273/769 (35%), Positives = 419/769 (54%), Gaps = 47/769 (6%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S+L+    +KS    +++H+ + +        +     ++  +    L +  R+FN +  
Sbjct: 13  SLLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINL--LHDSLRLFNTLHF 70

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
                W  ++  Y+  G   +SL  F  M + G+  D   F  VLK  A++ +    +  
Sbjct: 71  PPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESL 130

Query: 221 HKLFDELS-DRDVVSWNCMISGYIANGVAEK-------GLEVFKEMLNLGFNVDLATMVT 272
           H     +  D D+ + N +++ Y      +K         +V  EM     +V  A+++ 
Sbjct: 131 HGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLV 190

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM--------------------Y 312
              G        F   V      +C S+E       +D                      
Sbjct: 191 GNQGRKVSDIEAFNYDV------SCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDI 244

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           S    +D   ++FE M E+ +VSW ++IAG AR G++   + + R M    ++PD + ++
Sbjct: 245 SHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLS 304

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           S+L   A +  +  GK++H       + + +YV+++L+DMYAKC  + D+  VF  +  +
Sbjct: 305 SVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTER 364

Query: 433 DIVSWNTMIGA----------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIH 481
           D +SWN++I            L  F  ML    +P   + + I+PACA L  L  G+++H
Sbjct: 365 DGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLH 424

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
           GYI R+G   +  +A+++VDMY KCG +  AR +FD +  +D++SWT MI G  +HG   
Sbjct: 425 GYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHAL 484

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
           DAI  F  M+  GIEP+ V+F++VL ACSH+GLVDE W++FN M  +  I P +EHYA +
Sbjct: 485 DAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAV 544

Query: 602 VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNT 661
            DLL R G L EAY FI  MP+ P  ++W +LL  CR+H  V +AEKVA  + E++P NT
Sbjct: 545 SDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNT 604

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK 721
           G Y+LLAN+Y+ A +W+E  K R  + R G++K P CSWIE++ KV  F+AG  SHP  +
Sbjct: 605 GAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYE 664

Query: 722 KIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
           KI   ++ L   M++EGY P T     + +E +K+  +C HSE+LA+ FGI+N PAG TI
Sbjct: 665 KIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTI 724

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           RVTKNLRVC DCH   KF+SK   REIV+RD++RFHHFK+G CSC  +W
Sbjct: 725 RVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 33/221 (14%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D+ T  S+L L A+   +  GK++H      G+  +  V  S L+ M+  C  + +  
Sbjct: 297 KPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYV-ASSLIDMYAKCTRVVDSY 355

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--- 209
           RVF  +       WN ++    + G F E L  F++M    I   SY+FS ++   A   
Sbjct: 356 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLT 415

Query: 210 -----------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                        +      ++ A ++FD +  RD+VSW  MI 
Sbjct: 416 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIM 475

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           G   +G A   +E+F++M   G   +    + VL+ C++ G
Sbjct: 476 GCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAG 516



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 87/167 (52%), Gaps = 8/167 (4%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSII 122
           ++N+ I    + G  ++ ++       +KI  K+Y   SI+  CA L +L  GK++H  I
Sbjct: 368 SWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 427

Query: 123 CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             +G   D+ + + S LV M+  CG+++  R++F+++    +  W  ++   +  G+  +
Sbjct: 428 TRNG--FDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALD 485

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           ++ LF++M++ GI  +   F  VL   +  G    V +A K F+ ++
Sbjct: 486 AIELFEQMKTEGIEPNYVAFMAVLTACSHAG---LVDEAWKYFNSMT 529


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 275/777 (35%), Positives = 422/777 (54%), Gaps = 53/777 (6%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           + L L     S+    + H+ I   G   D  +L +KL       G +   R +F  +  
Sbjct: 22  NFLDLFKRSTSISHLAQTHAQIVLHGFRNDISLL-TKLTQRLSDLGAIYYARDIFLSVQR 80

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLF---KKMQSLGIAADSYTFS-------------CV 204
             VF++N+LM  +S   +   SL +F   +K   L   + +Y F+             CV
Sbjct: 81  PDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCV 140

Query: 205 LKCLAVVGNSR-----------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +   A+V                     RV+DA K+FD + ++D + WN MISGY  N +
Sbjct: 141 IHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200

Query: 248 AEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFN 305
             + ++VF++++N     +D  T++ +L   A    L  G  +H+ A K  C+S +    
Sbjct: 201 YVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLT 260

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
              + +YSKCG +  A  +F +     +V++ +MI GY   G  + ++ LF+ ++  G +
Sbjct: 261 G-FISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAK 319

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
                + S++      G L +   +H Y  +++  S   VS AL  +Y+K   +  A  +
Sbjct: 320 LKSSTLVSLV---PVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKL 376

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAMLQN--FEPDGVTMACILPACASLAA 473
           F++ P K + SWN MI           A+ LF  M QN  F P+ VT+ CIL ACA L A
Sbjct: 377 FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM-QNSEFSPNPVTITCILSACAQLGA 435

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           L  G+ +H  +      +   V+ A++ MY KCG +  AR LFD +P K+ ++W  MI+G
Sbjct: 436 LSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISG 495

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           YG+HG G +A+  F++M  +GI P  V+F+ VLYACSH+GLV EG   FN M +    EP
Sbjct: 496 YGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEP 555

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            ++HYAC+VD+L R G+L  A +FIE MP+ P  ++W +LL  CRIH +  LA  V+E +
Sbjct: 556 SVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKL 615

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
           FEL+PDN GY+VLL+N+++    + +   +R+   +R L K PG + IEI    ++F +G
Sbjct: 616 FELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSG 675

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
             SHP  K I   L++L  +M+  GY P+T  AL + +E E+E+ +  HSE+LA+AFG++
Sbjct: 676 DQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLI 735

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               G  IR+ KNLRVC DCH   K +SK   R IV+RD+NRFHHFKDG CSC  +W
Sbjct: 736 ATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 187/383 (48%), Gaps = 32/383 (8%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           +++DT T   IL   A+L+ L  G ++HS+  ++G    D VL +  + ++  CG +K  
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL-TGFISLYSKCGKIKMA 275

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---- 207
             +F +     +  +N ++H Y+  G  + SL LFK++   G    S T   ++      
Sbjct: 276 STLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHL 335

Query: 208 ---LAVVGNSRR----------------------VKDAHKLFDELSDRDVVSWNCMISGY 242
               A+ G S +                      ++ A KLFDE  ++ + SWN MISGY
Sbjct: 336 MLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             NG+ E  + +F+EM N  F+ +  T+  +LS CA  GAL  G+ VH       F   I
Sbjct: 396 TQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
             +  L+ MY+KCG +  A R+F+ M +++ V+W +MI+GY   G    A+ +F  M+  
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNS 515

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDV-HDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           GI P       +L+AC+  GL++ G ++ +  I     + S+     ++D+  + G +  
Sbjct: 516 GIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQR 575

Query: 422 AESVFNQMPVKDIVS-WNTMIGA 443
           A      MP++   S W T++GA
Sbjct: 576 ALQFIEAMPIQPGPSVWETLLGA 598



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 19/205 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + + G  E A+ +    + S+      T   IL  CA L +L  GK VH ++
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446

Query: 123 ----CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
                ES I +   ++G     M+  CG + E RR+F+ +       WN ++  Y   G+
Sbjct: 447 RSTDFESSIYVSTALIG-----MYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGH 501

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVV 233
            +E+L +F +M + GIA    TF CVL   +  G    VK+  ++F+ +  R      V 
Sbjct: 502 GQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAG---LVKEGDEIFNSMIHRYGFEPSVK 558

Query: 234 SWNCMISGYIANGVAEKGLEVFKEM 258
            + C++      G  ++ L+  + M
Sbjct: 559 HYACVVDILGRAGHLQRALQFIEAM 583


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/772 (34%), Positives = 421/772 (54%), Gaps = 45/772 (5%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           L L  +  +L    ++ + +   GI  D   + +KL   F   G +   R++FNK+    
Sbjct: 18  LTLLNNATTLSQLLQIQAQLILHGIHYDLSSI-TKLTHKFFDLGAVAHVRQLFNKVSKPD 76

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSL-GIAADSYTFSCVLKCLAVVGNSR------ 215
           +F++N+L+  +S  G  K S++L+  ++    +  D++T++  +   + + + R      
Sbjct: 77  LFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLH 136

Query: 216 --------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                     R + A K+FD + +RD V WN MISG+  N   E
Sbjct: 137 AHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
             + VF +ML++G + D  T+ TVL+  A       G  +   A K     ++     L+
Sbjct: 197 DSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLI 256

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
            +YSKCG       +F+++ +  ++S+ +MI+GY      + A+ LFR ++  G   +  
Sbjct: 257 SLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSS 316

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            +  ++        L++ + + +   +  +     VS AL  +Y +   +  A  +F++ 
Sbjct: 317 TLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDES 376

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGRE 479
           P K + SWN MI           A+ LF  M+    P+ VT+  IL ACA L AL  G+ 
Sbjct: 377 PEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKW 436

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +HG I    + ++  V+ A+VDMY KCG +V AR LFD++  K++++W  MI GYG+HG 
Sbjct: 437 VHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGH 496

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
           G +A+  F +M Q+GI P  V+F+S+LYACSHSGLV EG   F+ M      +P  EHYA
Sbjct: 497 GKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA 556

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           CMVD+L R G L+ A  FIE MP+ P   +WG+LL  C IH   ++A   ++ +F+L+P+
Sbjct: 557 CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPE 616

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           N GYYVLL+N+Y+    + +   +R+ + +R L K PGC+ IEI  +  +F +G  SHP 
Sbjct: 617 NVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQ 676

Query: 720 AKKIESLLKRLRLEMKREGYFPKT-RYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
           A  I  +L++L  +M+  GY  +T   AL + ++ EKE+ +  HSEKLA+AFG+++   G
Sbjct: 677 ATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPG 736

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             IR+ KNLRVC DCH   KF+SK   R IV+RD+NRFHHFK+G CSC  +W
Sbjct: 737 TEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 243/503 (48%), Gaps = 51/503 (10%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKS----KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           +N  I  F + G L K+   LY+  +     + D  TY   +   + L+    G  +H+ 
Sbjct: 80  FNVLIRGFSDNG-LPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAH 138

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
               G V  +  +GS +V ++      +  R+VF+ +      +WN ++  +S+   F++
Sbjct: 139 SIVDG-VASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFED 197

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR---------RVKDAHK---------- 222
           S+ +F  M  +G++ DS T + VL  +A +   R           K  H           
Sbjct: 198 SIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLIS 257

Query: 223 -------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                        LFD++   D++S+N MISGY  N   E  + +F+E+L  G  V+ +T
Sbjct: 258 LYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V ++        L   R +   +LK     + S +  L  +Y +  ++  A ++F++  
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           E+S+ SW +MI+GY + G+ D AI LF+ M+ + + P+   +TSIL ACA  G L IGK 
Sbjct: 378 EKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKW 436

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           VH  IK   ++S++YVS AL+DMYAKCGS+ +A  +F+ M  K++V+WN MI        
Sbjct: 437 VHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGH 496

Query: 443 ---ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI-HGYILRHGISADRNVAN 497
              AL LF  MLQ+   P GVT   IL AC+    +  G EI H     +G         
Sbjct: 497 GKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA 556

Query: 498 AIVDMYVKCGVLVLARSLFDMIP 520
            +VD+  + G L  A    + +P
Sbjct: 557 CMVDILGRAGQLTNALEFIERMP 579



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 142/316 (44%), Gaps = 42/316 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           +YNA I  +      E A+    E+L S ++  +++ T   ++ +      L+  + + +
Sbjct: 282 SYNAMISGYTFNHETESAVTLFRELLASGQR--VNSSTLVGLIPVYLPFNHLQLSRLIQN 339

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           +  + GI++   V  + L  ++    +++  R++F++     +  WN ++  Y++ G   
Sbjct: 340 LSLKIGIILQPSV-STALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTD 398

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------------NSRRVK---------- 218
            ++ LF++M    ++ +  T + +L   A +G             S R++          
Sbjct: 399 RAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALV 457

Query: 219 ----------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                     +A +LFD + D++VV+WN MI+GY  +G  ++ L++F EML  G      
Sbjct: 458 DMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGV 517

Query: 269 TMVTVLSGCANCGALMFGRAV-HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T +++L  C++ G +  G  + H+ A    F         ++D+  + G L  A+   E+
Sbjct: 518 TFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIER 577

Query: 328 MG-ERSVVSWTSMIAG 342
           M  E     W +++  
Sbjct: 578 MPLEPGPAVWGALLGA 593


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 255/657 (38%), Positives = 381/657 (57%), Gaps = 50/657 (7%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + D+ +LF+ +     ++W  +I  Y ++G+  + L  F  ML  G   D     +VL  
Sbjct: 56  LHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKS 115

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK-------------CGDL----- 318
           CA    L  G ++H + ++     ++   N L++MYSK              G++     
Sbjct: 116 CALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMT 175

Query: 319 --------------DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
                         D   ++FE M E+ +VSW ++IAG AR G+++  +R+ R M    +
Sbjct: 176 ERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANL 235

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           +PD + ++S+L   A +  +  GK++H       + + +YV+++L+DMYAKC  +AD+  
Sbjct: 236 KPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCR 295

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAA 473
           VF  +  +D +SWN++I            L  F  ML    +P   + + I+PACA L  
Sbjct: 296 VFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTT 355

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           L  G+++HGYI R+G   +  +A+++VDMY KCG +  A+ +FD +  +D++SWT MI G
Sbjct: 356 LHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMG 415

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
             +HG   DAI  F  M   GI+       +VL ACSH GLVDE W++FN M  +  I P
Sbjct: 416 CALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAP 468

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            +EHYA + DLL R G L EAY FI  M + P  +IW +LL  CR+H  + +AEKVA  +
Sbjct: 469 GVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRI 528

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
            E++P+NTG Y+LLAN+Y+ A +W+E  K R  + R G++K P CSWIE+K KV  F+AG
Sbjct: 529 LEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAG 588

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
             SHP  +KI   ++ L   M++EGY P T     + +E +K+  +C HSE+LA+ FGI+
Sbjct: 589 DESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGII 648

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           N PAG TIRVTKNLRVC DCH   KF+SK   REIV+RD++RFHHFK+G CSC  +W
Sbjct: 649 NTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 206/423 (48%), Gaps = 49/423 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D   + S+L+ CA L  L  G+ +H  I   G+  D                        
Sbjct: 105 DHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFD------------------------ 140

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT-FSCVLKCLAVVGN 213
                   ++  N LM+ YSK    +ES    ++    G   D  T  +  ++ ++V+  
Sbjct: 141 --------LYTGNALMNMYSKLRFLEES---GRQRLGAGEVFDEMTERTRSVRTVSVLSE 189

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
                   K+F+ + ++D+VSWN +I+G   NG+ E+ L + +EM       D  T+ +V
Sbjct: 190 D----SVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSV 245

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L   A    +  G+ +H  +++     +I   ++L+DMY+KC  +  + RVF  + ER  
Sbjct: 246 LPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDG 305

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           +SW S+IAG  + G+FD  +R FR M+   I+P  Y+ +SI+ ACA    L +GK +H Y
Sbjct: 306 ISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGY 365

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLF 447
           I  N    +++++++L+DMYAKCG++  A+ +F++M ++D+VSW  MI      G     
Sbjct: 366 ITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDA 425

Query: 448 VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIVDMYVKC 506
           + + +  E +G+    +L AC+    ++   +    + R  GI+       A+ D+  + 
Sbjct: 426 IELFEQMETEGIK--AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRA 483

Query: 507 GVL 509
           G L
Sbjct: 484 GRL 486



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 184/386 (47%), Gaps = 45/386 (11%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           +YS    L  ++R+F  +     ++W S+I  Y   G+   ++  F GM+  G+ PD   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK-------------CG 417
             S+L +CA    L +G+ +H YI    +   LY  NALM+MY+K              G
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 418 SMAD-------------------AESVFNQMPVKDIVSWNTMI------GALDLFVAMLQ 452
            + D                      +F  MP KD+VSWNT+I      G  +  + M++
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 453 -----NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
                N +PD  T++ +LP  A    + RG+EIHG  +R G+ AD  VA++++DMY KC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            +  +  +F ++  +D ISW  +IAG   +G   + +  F  M  A I+P   SF S++ 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           AC+H   +  G +    +      +  +   + +VD+ ++ GN+  A +  + M +  D 
Sbjct: 349 ACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DM 406

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHV 653
             W +++ GC +H +   A ++ E +
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQM 432



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 40/221 (18%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D+ T  S+L L A+   +  GK++H      G+  D  V  S L+ M+  C  + +  
Sbjct: 236 KPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYV-ASSLIDMYAKCTRVADSC 294

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--- 209
           RVF  +       WN ++    + G F E L  F++M    I   SY+FS ++   A   
Sbjct: 295 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLT 354

Query: 210 -----------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                        +      ++ A ++FD +  RD+VSW  MI 
Sbjct: 355 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIM 414

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           G   +G A   +E+F++M   G          VL+ C++ G
Sbjct: 415 GCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGG 448



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 5/135 (3%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSII 122
           ++N+ I    + G  ++ +        +KI  K+Y   SI+  CA L +L  GK++H  I
Sbjct: 307 SWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 366

Query: 123 CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             +G   D+ + + S LV M+  CG+++  +++F+++    +  W  ++   +  G   +
Sbjct: 367 TRNG--FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPD 424

Query: 182 SLYLFKKMQSLGIAA 196
           ++ LF++M++ GI A
Sbjct: 425 AIELFEQMETEGIKA 439


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 251/627 (40%), Positives = 383/627 (61%), Gaps = 14/627 (2%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + DA ++F     ++VVSW  +ISG   N    + ++VF+EM+   F  +  T+ +VL  
Sbjct: 72  LADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPA 131

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
            AN G +   ++VH F ++  F   +     L+DMYSK G +  A ++FE M ER+VV+W
Sbjct: 132 FANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTW 191

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++++GY+  G  + AI LF  M R+G+  D Y I S++ A    G L++G  +H +I  
Sbjct: 192 NAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIR 251

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
              ++  ++  ALMD+Y     + DA  VF++M VKD+ +W  M+           A+  
Sbjct: 252 TGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKH 311

Query: 447 FVAML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           F  ML  QN + D + +  IL +C+   AL++GR +H   ++   + +  V +A++DMY 
Sbjct: 312 FNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYA 371

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
            CG L  A+  F  +  KD++ W  MIAG GM+G+G DAI  F  M+ +G++PDE +F+S
Sbjct: 372 NCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVS 431

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           VLYACSH+G+V EG + F  M    ++ P L+HYAC++D+L R G L  AY FI  MP  
Sbjct: 432 VLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ 491

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           PD  ++ +LL  CRIH  +KL  ++++ +FE+EP++ GYYVLL+N+YA A  WE VK  R
Sbjct: 492 PDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTR 551

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
             +  + +KK+PG S IEI  ++  F+AG   HP   KIE +LK L L++K+ GY P T 
Sbjct: 552 ASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTN 611

Query: 745 YALIN-ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
             L + +D+M+K++ L  HSEK+A+AFG++       IR+TKNLR C DCH  +KF+SK 
Sbjct: 612 VLLQDVSDDMKKDI-LYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKV 670

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             R +V++D+NRFH F+DG CSCR +W
Sbjct: 671 FGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 242/489 (49%), Gaps = 52/489 (10%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + + SIL+   DLK L+   ++H+ I  SG+   +  L + L+  +V CG L + +++F+
Sbjct: 25  QPHASILRKLKDLKPLQ---QIHAQIITSGLT-HNTFLSNSLMNAYVYCGLLADAKQIFH 80

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
                 V  W +L+   +K   F E++ +F++M       ++ T S VL   A +G  R 
Sbjct: 81  HTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRI 140

Query: 217 VKDAH--------------------------------KLFDELSDRDVVSWNCMISGYIA 244
            K  H                                +LF+ +S+R+VV+WN ++SGY  
Sbjct: 141 AKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSD 200

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           +G +E+ +++F  M   G  VD  T+++++    + G L  G  +H F ++  +  +   
Sbjct: 201 HGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHI 260

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EG 363
              L+D+Y     +D A RVF +M  + V +WT M+ G++    +D AI+ F  M+  + 
Sbjct: 261 KTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQN 320

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           ++ D  A+  IL +C+  G L+ G+ VH    +    ++++V +A++DMYA CG++ DA+
Sbjct: 321 LKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAK 380

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLA 472
             F  M  KD+V WN MI           A+DLF+ M     +PD  T   +L AC+   
Sbjct: 381 RFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAG 440

Query: 473 ALERGREIHGYILR--HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTI 529
            +  G +I  ++++  H I   ++ A  ++D+  + G L  A S  + +P + D   ++ 
Sbjct: 441 MVYEGLQIFYHMVKTSHVIPNLQHYA-CVIDILGRAGQLDAAYSFINNMPFQPDFDVYST 499

Query: 530 MIAGYGMHG 538
           ++    +HG
Sbjct: 500 LLGACRIHG 508



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 188/362 (51%), Gaps = 14/362 (3%)

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           + +HA  + +  +     +N+L++ Y  CG L  A ++F     ++VVSWT +I+G A+ 
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
             F  AI +FR M+    +P+   I+S+L A A  GL+ I K VH +      + +++V 
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFE 455
            AL+DMY+K G M  A  +F  M  +++V+WN ++           A+DLF  M  +   
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
            D  T+  ++PA  S+  L+ G  IHG+I+R G   D+++  A++D+YV    +  A  +
Sbjct: 221 VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRV 280

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ-AGIEPDEVSFISVLYACSHSGL 574
           F  +  KD+ +WT+M+ G+        AI  FN M     ++ D ++ + +L +CSHSG 
Sbjct: 281 FSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGA 340

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           + +G R   +    C     +   + ++D+ +  GNL +A RF   M    D   W +++
Sbjct: 341 LQQGRRVHALAIKTC-FANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNAMI 398

Query: 635 CG 636
            G
Sbjct: 399 AG 400



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 11/192 (5%)

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
           Q   P     A IL     L  L+   +IH  I+  G++ +  ++N++++ YV CG+L  
Sbjct: 18  QRLSPLAQPHASILRKLKDLKPLQ---QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLAD 74

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A+ +F   P K+++SWTI+I+G   +    +AI  F +M     +P+ V+  SVL A ++
Sbjct: 75  AKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFAN 134

Query: 572 SGLVDEGWR---FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
            GL+        F+    +E N+  +      +VD+ S+ G +  A +  E M    +  
Sbjct: 135 LGLIRIAKSVHCFWVRGGFEGNVFVE----TALVDMYSKFGCMGVARQLFESMS-ERNVV 189

Query: 629 IWGSLLCGCRIH 640
            W +++ G   H
Sbjct: 190 TWNAIVSGYSDH 201



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 102/232 (43%), Gaps = 11/232 (4%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K+D+     IL  C+   +L+ G++VH++  ++    ++  +GS ++ M+  CG+L++ +
Sbjct: 322 KLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFA-NNIFVGSAVIDMYANCGNLEDAK 380

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           R F  +    V  WN ++      G   +++ LF +M+  G+  D  TF  VL   +  G
Sbjct: 381 RFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAG 440

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL--EVFKEMLNLGFNVDLATM 270
               V +  ++F  +     V  N      + + +   G     +  + N+ F  D    
Sbjct: 441 ---MVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVY 497

Query: 271 VTVLSGCANCGALMFGRAVHA--FALKACFSKEISFNNTLLDMYSKCGDLDG 320
            T+L  C   G +  G  +    F ++     +  +   L +MY+  G+ +G
Sbjct: 498 STLLGACRIHGNIKLGHEISQKIFEMEP---NDAGYYVLLSNMYALAGNWEG 546


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 288/834 (34%), Positives = 445/834 (53%), Gaps = 57/834 (6%)

Query: 47  TINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQ 104
           ++  +    S+  V    ++   I  + E G  ++A+ + +    E  + D  T+ ++L+
Sbjct: 77  SLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLK 136

Query: 105 LCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVF 164
            CA L  L  G+ +H+ I ESG+     VL + L+ ++ +CG +     +F K++   V 
Sbjct: 137 ACARLGDLSQGRSIHAWIVESGLK-GKSVLANLLLHIYGSCGCVASAMLLFEKMERDLVS 195

Query: 165 IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK------ 218
            WN  +   +++G+   +L LF++MQ  G+     T    L   A +  ++ +       
Sbjct: 196 -WNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQAIHFIVRES 254

Query: 219 -----------------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                                   A ++FD  ++RDVVSWN M+  Y  +G   +   +F
Sbjct: 255 GLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLF 314

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
             ML+ G +    T+V   +GC++   L FGR +H  AL+    ++I   N LLDMY++C
Sbjct: 315 ARMLHEGISPSKVTLVNASTGCSS---LRFGRMIHGCALEKGLDRDIVLGNALLDMYTRC 371

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G  + A  +F+++   + VSW +MIAG +++G    A+ LF+ M  EG+ P      ++L
Sbjct: 372 GSPEEARHLFKRI-PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLL 430

Query: 376 HACACDG----LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            A A +      +  G+ +H  I      S   +  A++ MYA CG++ +A + F +  +
Sbjct: 431 EAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAM 490

Query: 432 KD---IVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERG 477
           +D   +VSWN +I           AL  F  M L    P+ +T   +L ACA  AAL  G
Sbjct: 491 EDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG 550

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA-KDLISWTIMIAGYGM 536
             +H ++   G+ ++  VA A+  MY +CG L  AR +F+ +   +D++ +  MIA Y  
Sbjct: 551 EIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQ 610

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           +G   +A+  F  M+Q G  PDE SF+SVL ACSH GL DEGW  F  MR    I P  +
Sbjct: 611 NGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSED 670

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HYAC VD+L R G L++A   I  M V P   +W +LL  CR + +V         V EL
Sbjct: 671 HYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVREL 730

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           +P +   YV+L+N+ A A KW+E  ++R ++  RGL+K  G SWIEIK +V+ FVAG  S
Sbjct: 731 DPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRS 790

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP +++I   L+RL  E++  GY P TR  L   DE EKE  LC HSE+LA+A G+++  
Sbjct: 791 HPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMS-S 849

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +  T+RV KNLRVC DCH   KF+SK   +EIV+RD++RFHHF DG CSC  +W
Sbjct: 850 STDTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 160/599 (26%), Positives = 277/599 (46%), Gaps = 62/599 (10%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L SS            +L+   D + L  G+++H+ I   G+   +  LG+ L+ +++ C
Sbjct: 19  LPSSSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGL---EEELGNHLLRLYLKC 75

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
             L +   VF++++      W  ++  Y++ G  K ++ +F +MQ  G+  D+ TF  VL
Sbjct: 76  ESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVL 135

Query: 206 KCLAVVGNSRRVKDAHK--------------------------------LFDELSDRDVV 233
           K  A +G+  + +  H                                 LF+++ +RD+V
Sbjct: 136 KACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLV 194

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           SWN  I+    +G     LE+F+ M   G      T+V  L+ CA    +   +A+H   
Sbjct: 195 SWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCAT---IRQAQAIHFIV 251

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
            ++   + +  +  L   Y++ G L  A  VF++  ER VVSW +M+  YA+ G    A 
Sbjct: 252 RESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAA 311

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
            LF  M+ EGI P    + +    C+    L  G+ +H    E  +   + + NAL+DMY
Sbjct: 312 LLFARMLHEGISPSKVTLVNASTGCSS---LRFGRMIHGCALEKGLDRDIVLGNALLDMY 368

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMA 462
            +CGS  +A  +F ++P  + VSWNTMI           A++LF  M L+   P   T  
Sbjct: 369 TRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYL 427

Query: 463 CILPACAS----LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD- 517
            +L A AS      A+  GR++H  I+  G +++  +  A+V MY  CG +  A + F  
Sbjct: 428 NLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQR 487

Query: 518 --MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
             M    D++SW  +I+    HG G  A+  F  M   G+ P++++ ++VL AC+ +  +
Sbjct: 488 GAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAAL 547

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
            EG    + +R+   +E  L     +  +  R G+L  A    E + V  D  I+ +++
Sbjct: 548 TEGEIVHDHLRHS-GMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 208/451 (46%), Gaps = 38/451 (8%)

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           A +V +L    +   L  GR +HA  +     +E+   N LL +Y KC  L     VF +
Sbjct: 30  AHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSR 87

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           +  R   SWT++I  Y   G    AI +F  M +EG+  D     ++L ACA  G L  G
Sbjct: 88  LEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG 147

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
           + +H +I E+ ++    ++N L+ +Y  CG +A A  +F +M  +D+VSWN  I      
Sbjct: 148 RSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQS 206

Query: 443 -----ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL+LF  M L+   P  +T+   L  CA+   + + + IH  +   G+     V+
Sbjct: 207 GDLGIALELFQRMQLEGVRPARITLVIALTVCAT---IRQAQAIHFIVRESGLEQTLVVS 263

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
            A+   Y + G L  A+ +FD    +D++SW  M+  Y  HG   +A   F  M   GI 
Sbjct: 264 TALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIS 323

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA----CMVDLLSRTGNLS 612
           P +V+ ++    CS         RF  M+ + C +E  L+        ++D+ +R G+  
Sbjct: 324 PSKVTLVNASTGCS-------SLRFGRMI-HGCALEKGLDRDIVLGNALLDMYTRCGSPE 375

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE---PDNTGYYVLLAN 669
           EA    + +P   +A  W +++ G     ++K A ++ + + +LE   P    Y  LL  
Sbjct: 376 EARHLFKRIPC--NAVSWNTMIAGSSQKGQMKRAVELFQRM-QLEGMAPVRATYLNLLEA 432

Query: 670 VYA---EAEKWEEVKKLREKISRRGLKKNPG 697
           V +   EA    E +KL  +I   G    P 
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPA 463


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/772 (34%), Positives = 421/772 (54%), Gaps = 45/772 (5%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           L L  +  +L    ++ + +   GI  D   + +KL   F   G +   R++FNK+    
Sbjct: 18  LTLLNNATTLSQLLQIQAQLILHGIHYDLSSI-TKLTHKFFDLGAVAHVRQLFNKVSKPD 76

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYTFSCVLKCLAVVGNSR------ 215
           +F++N+L+  +S  G  K S++L+  + +   +  D++T++  +   + + + R      
Sbjct: 77  LFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLH 136

Query: 216 --------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                     R + A K+FD + +RD V WN MISG+  N   E
Sbjct: 137 AHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
             + VF +ML++G + D  T+ TVL+  A       G  +   A K     ++     L+
Sbjct: 197 DSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLI 256

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
            +YSKCG       +F+++ +  ++S+ +MI+GY      + A+ LFR ++  G   +  
Sbjct: 257 SLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSS 316

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            +  ++        L++ + + +   +  +     VS AL  +Y +   +  A  +F++ 
Sbjct: 317 TLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDES 376

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGRE 479
           P K + SWN MI           A+ LF  M+    P+ VT+  IL ACA L AL  G+ 
Sbjct: 377 PEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKW 436

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +HG I    + ++  V+ A+VDMY KCG +V AR LFD++  K++++W  MI GYG+HG 
Sbjct: 437 VHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGH 496

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
           G +A+  F +M Q+GI P  V+F+S+LYACSHSGLV EG   F+ M      +P  EHYA
Sbjct: 497 GKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA 556

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           CMVD+L R G L+ A  FIE MP+ P   +WG+LL  C IH   ++A   ++ +F+L+P+
Sbjct: 557 CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPE 616

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           N GYYVLL+N+Y+    + +   +R+ + +R L K PGC+ IEI  +  +F +G  SHP 
Sbjct: 617 NVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQ 676

Query: 720 AKKIESLLKRLRLEMKREGYFPKT-RYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
           A  I  +L++L  +M+  GY  +T   AL + ++ EKE+ +  HSEKLA+AFG+++   G
Sbjct: 677 ATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPG 736

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             IR+ KNLRVC DCH   KF+SK   R IV+RD+NRFHHFK+G CSC  +W
Sbjct: 737 TEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 243/503 (48%), Gaps = 51/503 (10%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI----DTKTYCSILQLCADLKSLEDGKKVHSI 121
           +N  I  F + G L K+   LY+  + K     D  TY   +   + L+    G  +H+ 
Sbjct: 80  FNVLIRGFSDNG-LPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAH 138

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
               G V  +  +GS +V ++      +  R+VF+ +      +WN ++  +S+   F++
Sbjct: 139 SIVDG-VASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFED 197

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR---------RVKDAHK---------- 222
           S+ +F  M  +G++ DS T + VL  +A +   R           K  H           
Sbjct: 198 SIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLIS 257

Query: 223 -------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                        LFD++   D++S+N MISGY  N   E  + +F+E+L  G  V+ +T
Sbjct: 258 LYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V ++        L   R +   +LK     + S +  L  +Y +  ++  A ++F++  
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           E+S+ SW +MI+GY + G+ D AI LF+ M+ + + P+   +TSIL ACA  G L IGK 
Sbjct: 378 EKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKW 436

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           VH  IK   ++S++YVS AL+DMYAKCGS+ +A  +F+ M  K++V+WN MI        
Sbjct: 437 VHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGH 496

Query: 443 ---ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI-HGYILRHGISADRNVAN 497
              AL LF  MLQ+   P GVT   IL AC+    +  G EI H     +G         
Sbjct: 497 GKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA 556

Query: 498 AIVDMYVKCGVLVLARSLFDMIP 520
            +VD+  + G L  A    + +P
Sbjct: 557 CMVDILGRAGQLTNALEFIERMP 579



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 142/316 (44%), Gaps = 42/316 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           +YNA I  +      E A+    E+L S ++  +++ T   ++ +      L+  + + +
Sbjct: 282 SYNAMISGYTFNHETESAVTLFRELLASGQR--VNSSTLVGLIPVYLPFNHLQLSRLIQN 339

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           +  + GI++   V  + L  ++    +++  R++F++     +  WN ++  Y++ G   
Sbjct: 340 LSLKIGIILQPSV-STALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTD 398

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------------NSRRVK---------- 218
            ++ LF++M    ++ +  T + +L   A +G             S R++          
Sbjct: 399 RAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALV 457

Query: 219 ----------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                     +A +LFD + D++VV+WN MI+GY  +G  ++ L++F EML  G      
Sbjct: 458 DMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGV 517

Query: 269 TMVTVLSGCANCGALMFGRAV-HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T +++L  C++ G +  G  + H+ A    F         ++D+  + G L  A+   E+
Sbjct: 518 TFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIER 577

Query: 328 MG-ERSVVSWTSMIAG 342
           M  E     W +++  
Sbjct: 578 MPLEPGPAVWGALLGA 593


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 238/577 (41%), Positives = 361/577 (62%), Gaps = 12/577 (2%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           VD     T+L  C     L  GR VH   +++ F  ++  NNTLL+MY+KCG L+ A +V
Sbjct: 49  VDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKV 108

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F+KM ER  V+WT++I+GY++      A+ LF  M+R G  P+ + ++S++ A A +   
Sbjct: 109 FDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRG 168

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
             G  +H +  +    S+++V +AL+D+Y + G M DA+ VF+ +  ++ VSWN +I   
Sbjct: 169 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 228

Query: 443 --------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                   AL+LF  ML + F P   + A +  AC+S   LE+G+ +H Y+++ G     
Sbjct: 229 ARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 288

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
              N ++DMY K G +  AR +FD +  +D++SW  ++  Y  HGFG +A+  F +MR+ 
Sbjct: 289 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRG 348

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           GI P+E+SF+SVL ACSHSGL+DEGW ++ +M+ +  I  +  HY  +VDLL R G+L+ 
Sbjct: 349 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNR 407

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A RFIE MP+ P A IW +LL  CR+H   +L    AEHVFEL+PD+ G +V+L N+YA 
Sbjct: 408 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 467

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
             +W +  ++R+K+   G+KK P CSW+EI+  +++FVA    HP  ++I    + +  +
Sbjct: 468 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAK 527

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           +K  GY P T + +++ D+ E+EV L  HSEK+A+AF +LN P G TI + KN+RVCGDC
Sbjct: 528 IKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDC 587

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H   K  SK   REI++RD+NRFHHFKDG CSC+ +W
Sbjct: 588 HSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 195/384 (50%), Gaps = 36/384 (9%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D + Y ++L+ C   K L  G+ VH  + +S I   D V+ + L+ M+  CG L+E R+
Sbjct: 49  VDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQS-IFRHDLVMNNTLLNMYAKCGSLEEARK 107

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV--- 210
           VF+K+       W  L+  YS+     ++L LF +M   G + + +T S V+K  A    
Sbjct: 108 VFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERR 167

Query: 211 ---------------------VGNSRR--------VKDAHKLFDELSDRDVVSWNCMISG 241
                                VG++          + DA  +FD L  R+ VSWN +I+G
Sbjct: 168 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 227

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           +      EK LE+F+ ML  GF     +  ++   C++ G L  G+ VHA+ +K+   K 
Sbjct: 228 HARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG-EKL 286

Query: 302 ISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++F  NTLLDMY+K G +  A ++F+++ +R VVSW S++  YA+ G  + A+  F  M 
Sbjct: 287 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMR 346

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           R GI P+  +  S+L AC+  GLL+ G   ++ +K++ +    +    ++D+  + G + 
Sbjct: 347 RGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLN 406

Query: 421 DAESVFNQMPVKDIVS-WNTMIGA 443
            A     +MP++   + W  ++ A
Sbjct: 407 RALRFIEEMPIEPTAAIWKALLNA 430



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 151/373 (40%), Gaps = 75/373 (20%)

Query: 115 GKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
           G ++H    + G   D  V +GS L+ ++   G + + + VF+ +++     WN L+  +
Sbjct: 171 GHQLHGFCVKCGF--DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 228

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------------------------KCLA 209
           ++    +++L LF+ M   G     ++++ +                         K +A
Sbjct: 229 ARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 288

Query: 210 VVGN--------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
             GN        S  + DA K+FD L+ RDVVSWN +++ Y  +G   + +  F+EM   
Sbjct: 289 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRG 348

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G   +  + ++VL+ C++ G L  G   +    K     E     T++D+  + GDL+ A
Sbjct: 349 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRA 408

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
           +R  E+M                                   IEP      ++L+AC   
Sbjct: 409 LRFIEEM----------------------------------PIEPTAAIWKALLNACRMH 434

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VS 436
              E+G    +++ E D          L ++YA  G   DA  V  +M    +      S
Sbjct: 435 KNTELGAYAAEHVFELDPDDP-GPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 493

Query: 437 WNTMIGALDLFVA 449
           W  +  A+ +FVA
Sbjct: 494 WVEIENAIHMFVA 506


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 262/684 (38%), Positives = 409/684 (59%), Gaps = 25/684 (3%)

Query: 171 HEYSKTGNF-----KESLYL----FKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
           +EY  TG F     KE++ L    F  +   G         C L  + V GN   ++ A+
Sbjct: 41  NEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGD-LESAY 99

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           K+FD + DR+VV+W  MI+ +   G +   +++F +M+  G+  D  T+  V+S CA  G
Sbjct: 100 KVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMG 159

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC---GDLDGAIRVFEKMGERSVVSWTS 338
            L  GR  H   +K+    ++    +L+DMY+KC   G +D A +VF++M   +V+SWT+
Sbjct: 160 LLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTA 219

Query: 339 MIAGYAREGVFD-GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           +I GY + G  D  AI LF  MV+  ++P+ +  +S+L ACA    + +G+ V+  + + 
Sbjct: 220 IITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKM 279

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE-- 455
            + S   V N+L+ MY++CG+M +A   F+ +  K++VS+NT++ A    +   + FE  
Sbjct: 280 RLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELF 339

Query: 456 ---------PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
                     +  T A +L   +S+ A+ +G +IH  IL+ G  ++ ++ NA++ MY +C
Sbjct: 340 NEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRC 399

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G +  A  +F+ +   ++ISWT MI G+  HGF   A+ TF+ M +AG+ P+EV++I+VL
Sbjct: 400 GNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVL 459

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            ACSH GL+ EG + F  M+ E  I P++EHYAC+VDLL R+G+L EA   +  MP   D
Sbjct: 460 SACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKAD 519

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
           A +  + L  CR+H  + L +  AE + E +P +   Y+LL+N++A A +WEEV ++R+K
Sbjct: 520 ALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKK 579

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +  R L K  GCSWIE++ KV+ F  G +SHP A++I   L +L L++K  GY P T + 
Sbjct: 580 MKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFV 639

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
           L + +E +KE  L  HSEK+A+A+G ++    + IRV KNLRVCGDCH   K+ S   R+
Sbjct: 640 LHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRK 699

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           EIVLRD+NRFHHFKDG CSC  +W
Sbjct: 700 EIVLRDANRFHHFKDGTCSCNDYW 723



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 238/458 (51%), Gaps = 21/458 (4%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           RD+VSW+ +IS Y  N  A + +  F +ML  GF  +      V   C+N   +  G+ +
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64

Query: 290 HAFALK-ACFSKEISFNNTLLDMYSKC-GDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
             F LK   F  ++     L+DM+ K  GDL+ A +VF++M +R+VV+WT MI  + + G
Sbjct: 65  FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
               A+ LF  MV  G  PD + ++ ++ ACA  GLL +G+  H  + ++ +   + V  
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184

Query: 408 ALMDMYAKC---GSMADAESVFNQMPVKDIVSWNTMIG-----------ALDLFVAMLQ- 452
           +L+DMYAKC   GS+ DA  VF++MPV +++SW  +I            A++LF+ M+Q 
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
             +P+  T + +L ACA+L+ +  G +++  +++  +++   V N+++ MY +CG +  A
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENA 304

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           R  FD++  K+L+S+  ++  Y       +A   FN++  AG   +  +F S+L   S  
Sbjct: 305 RKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSI 364

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           G + +G +  + +  +   +  L     ++ + SR GN+  A++    M    +   W S
Sbjct: 365 GAIGKGEQIHSRI-LKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDG-NVISWTS 422

Query: 633 LLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
           ++ G   H     A +    + E  + P+   Y  +L+
Sbjct: 423 MITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLS 460



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 242/517 (46%), Gaps = 55/517 (10%)

Query: 77  GNLEKAMEVL---YSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSIICESGIVIDD 131
            N EKA E +   +   +       YC   + + C++ +++  GK +   + ++G    D
Sbjct: 18  ANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFESD 77

Query: 132 GVLGSKLVFMFVTC-GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
             +G  L+ MFV   GDL+   +VF+++ +  V  W L++  + + G  ++++ LF  M 
Sbjct: 78  VCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMV 137

Query: 191 SLGIAADSYTFSCVLKCLAVVG-----------------------------------NSR 215
             G   D +T S V+   A +G                                      
Sbjct: 138 LSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADG 197

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK-GLEVFKEMLNLGFNVDLATMVTVL 274
            V DA K+FD +   +V+SW  +I+GY+ +G  ++  +E+F EM+      +  T  +VL
Sbjct: 198 SVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVL 257

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             CAN   +  G  V+A  +K   +      N+L+ MYS+CG+++ A + F+ + E+++V
Sbjct: 258 KACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLV 317

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           S+ +++  YA+    + A  LF  +   G   + +   S+L   +  G +  G+ +H  I
Sbjct: 318 SYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRI 377

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
            ++  +S+L++ NAL+ MY++CG++  A  VFN+M   +++SW +MI           AL
Sbjct: 378 LKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRAL 437

Query: 445 DLFVAMLQ-NFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANAIVDM 502
           + F  ML+    P+ VT   +L AC+ +  +  G +      + HGI         +VD+
Sbjct: 438 ETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDL 497

Query: 503 YVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
             + G L  A  L + +P K D +     +    +HG
Sbjct: 498 LGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHG 534



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 172/315 (54%), Gaps = 30/315 (9%)

Query: 330 ERSVVSWTSMIAGYA-REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
           +R +VSW+++I+ YA  E  F+ AI  F  M+  G  P+ Y  T +  AC+    + +GK
Sbjct: 4   KRDLVSWSALISCYANNEKAFE-AISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62

Query: 389 DVHDY-IKENDMQSSLYVSNALMDMYAKC-GSMADAESVFNQMPVKDIVSWNTMI----- 441
            +  + +K    +S + V  AL+DM+ K  G +  A  VF++MP +++V+W  MI     
Sbjct: 63  IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122

Query: 442 -----GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 A+DLF+ M L  + PD  T++ ++ ACA +  L  GR+ H  +++ G+  D  V
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV 182

Query: 496 ANAIVDMYVKC---GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD--AIATFNDM 550
             ++VDMY KC   G +  AR +FD +P  +++SWT +I GY   G GCD  AI  F +M
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSG-GCDREAIELFLEM 241

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC----MVDLLS 606
            Q  ++P+  +F SVL AC++   +  G + + ++     ++ +L    C    ++ + S
Sbjct: 242 VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALV-----VKMRLASINCVGNSLISMYS 296

Query: 607 RTGNLSEAYRFIEMM 621
           R GN+  A +  +++
Sbjct: 297 RCGNMENARKAFDVL 311



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 176/372 (47%), Gaps = 43/372 (11%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ S+L+ CA+L  +  G++V++++ +  +   + V G+ L+ M+  CG+++  R+ F+ 
Sbjct: 252 TFSSVLKACANLSDIWLGEQVYALVVKMRLASINCV-GNSLISMYSRCGNMENARKAFDV 310

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG----- 212
           +    +  +N +++ Y+K+ N +E+  LF +++  G   +++TF+ +L   + +G     
Sbjct: 311 LFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKG 370

Query: 213 ---NSRRVKD------------------------AHKLFDELSDRDVVSWNCMISGYIAN 245
              +SR +K                         A ++F+E+ D +V+SW  MI+G+  +
Sbjct: 371 EQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKH 430

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISF 304
           G A + LE F +ML  G + +  T + VLS C++ G +  G +   +  ++      +  
Sbjct: 431 GFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEH 490

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR-EGVFD-GAIRLFRGMVRE 362
              ++D+  + G L+ A+ +   M  ++         G  R  G  D G       + ++
Sbjct: 491 YACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQD 550

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ-----SSLYVSNALMDMYAKCG 417
             +P  Y + S LHA A  G  E   ++   +KE ++      S + V N +   Y    
Sbjct: 551 PHDPAAYILLSNLHASA--GQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDT 608

Query: 418 SMADAESVFNQM 429
           S   A+ +++++
Sbjct: 609 SHPQAQEIYDEL 620



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 128/277 (46%), Gaps = 15/277 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +YN  +  + +  N E+A E+    E   + ++  T+ S+L   + + ++  G+++HS I
Sbjct: 318 SYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRI 377

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +SG   +  +  + L+ M+  CG+++   +VFN++ +G V  W  ++  ++K G    +
Sbjct: 378 LKSGFKSNLHICNA-LISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRA 436

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVS----WNC 237
           L  F KM   G++ +  T+  VL   + VG    + +  K F  +  +  +V     + C
Sbjct: 437 LETFHKMLEAGVSPNEVTYIAVLSACSHVG---LISEGLKHFKSMKVEHGIVPRMEHYAC 493

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           ++     +G  E+ +E+   M    F  D   + T L  C   G +  G+      L+  
Sbjct: 494 VVDLLGRSGHLEEAMELVNSM---PFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQD 550

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
                ++   L ++++  G  +    + +KM ER++ 
Sbjct: 551 PHDPAAY-ILLSNLHASAGQWEEVAEIRKKMKERNLT 586


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 287/816 (35%), Positives = 421/816 (51%), Gaps = 116/816 (14%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S   ++ +  ILQ    +K    G+ VH  I + G+ +   ++ + + F +   G L+  
Sbjct: 6   SPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTF-YAKTGSLRFA 64

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
             VF+++     F WN L+  Y+K GNF+ S                             
Sbjct: 65  HHVFDEMPLKSTFSWNTLISGYAKQGNFEVS----------------------------- 95

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                     +L  E+ D D VSW  +I GY   G+ +  + +F +M++        T+ 
Sbjct: 96  ---------RRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVS 146

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD-------------- 317
            VLS CA    L  GR +H+F +K      +    +LL+MY+KCGD              
Sbjct: 147 NVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVK 206

Query: 318 -----------------LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                             + A   FEKM +R +VSW SMI+GY+++G    A+ +F  M+
Sbjct: 207 NISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKML 266

Query: 361 RE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG-- 417
            E  ++PD + + SIL ACA    L IGK +H YI   + ++S  V NAL+ MYAK G  
Sbjct: 267 NEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGV 326

Query: 418 ---------------------SMAD----------AESVFNQMPVKDIVSWNTMI----- 441
                                S+ D          A  +FN++  +D+V+W  MI     
Sbjct: 327 EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQ 386

Query: 442 -----GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 AL+LF  M+ +  EP+  T+A +L   +SL  LE G++IH   ++ G S+  +V
Sbjct: 387 NGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSV 446

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPA-KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
            NA++ MY K G + +A+ +FD+    K+++SWT MI     HG G +AI  F  M   G
Sbjct: 447 TNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG 506

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           ++PD ++++ VL AC+H GLV++G +++NMM     IEP L HYACM+DL  R G L EA
Sbjct: 507 MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEA 566

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           Y FIE MP+ PD   WGSLL  C+IH    LA+  AE +  ++P N+G Y+ LANVY+  
Sbjct: 567 YLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC 626

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            KWE   + R+ +  RG++K  G SWI IK +V+ F      HP   +I  L+  +  E+
Sbjct: 627 GKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEI 686

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           K+ G+ P T   L + +E  KE  L  HSEKLA+AFG+LN P    +R+ KNLRVC DCH
Sbjct: 687 KKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCH 746

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              KF+SK   REI++RD+ RFHHFKDG CSCR +W
Sbjct: 747 SAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 250/528 (47%), Gaps = 91/528 (17%)

Query: 61  CKTKNYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKV 118
           C   ++ A I  + + G  + A+ +     SE+      T  ++L  CA  ++L+ G+K+
Sbjct: 105 CDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKI 164

Query: 119 HSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
           HS + + G+     V  + L+ M+  CGD    + VF+++    +  WN L+  Y ++G 
Sbjct: 165 HSFVVKLGLGSCVPV-ATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQ 223

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
           F+ +   F+KM                                       DRD+VSWN M
Sbjct: 224 FELAASQFEKM--------------------------------------PDRDIVSWNSM 245

Query: 239 ISGYIANGVAEKGLEVFKEMLN-LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           ISGY   G   + L +F +MLN      D  T+ ++LS CAN   L  G+ +HA+ L+A 
Sbjct: 246 ISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAE 305

Query: 298 FSKEISFNNTLLDMYSKCGD------------------------LDG---------AIRV 324
                +  N L+ MY+K G                         LDG         A  +
Sbjct: 306 TETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREI 365

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F K+ +R VV+WT+MI GY + G+++ A+ LFR MV EG EP+ Y + ++L   +   +L
Sbjct: 366 FNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTIL 425

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP--VKDIVSWNTMIG 442
           E GK +H    +    S+  V+NAL+ MYAK G++  A+ VF+ +P   K+IVSW +MI 
Sbjct: 426 EHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIM 484

Query: 443 AL----------DLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGIS 490
           AL          +LF  ML    +PD +T   +L AC  +  +E+GR+ +  +   H I 
Sbjct: 485 ALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIE 544

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
              +    ++D+Y + G+L  A    + +P + D I+W  ++A   +H
Sbjct: 545 PTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 134/291 (46%), Gaps = 35/291 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           + A I  + + G    A+E+  L  +E  + ++ T  ++L + + L  LE GK++H+   
Sbjct: 377 WTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAI 436

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK--VFIWNLLMHEYSKTGNFKE 181
           ++G      V  + L+ M+   G++   +RVF+ + NGK  +  W  ++   ++ G  KE
Sbjct: 437 KAGESSTPSVTNA-LIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKE 494

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD--VVSWNCMI 239
           ++ LF++M S+G+  D  T+  VL     VG   + +  + +  E+ + +  +  + CMI
Sbjct: 495 AINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMI 554

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
             Y   G+ +   E +  + ++    D     ++L+ C           +H  A  A  +
Sbjct: 555 DLYGRAGLLQ---EAYLFIESMPIEPDNIAWGSLLASC----------KIHKNADLAKVA 601

Query: 300 KE----ISFNNT-----LLDMYSKCGDLDGAIRVFEKMGERSV-----VSW 336
            E    I   N+     L ++YS CG  + A +  + M +R V     +SW
Sbjct: 602 AERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISW 652


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 283/821 (34%), Positives = 449/821 (54%), Gaps = 63/821 (7%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI---DTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           I R    G+L  A+  L    +  I   D+ T+ S+L+ C   +    GK VH+ + E  
Sbjct: 33  ILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFD 92

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN-GK--VFIWNLLMHEYSKTGNFKESL 183
           I   D VL + L+ ++   GD  +   VF  +   GK  V  W+ +M  Y   G   +++
Sbjct: 93  IE-PDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLA---VVGNSR------------------------- 215
            +F +   LG+  + Y ++ V++  +    VG  R                         
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211

Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                   ++A+K+FD++S+ +VV+W  MI+  +  G   + +  F +M+  GF  D  T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC---GDLDGAIRVFE 326
           + +V S CA    L  G+ +H++A+++    ++    +L+DMY+KC   G +D   +VF+
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFD 329

Query: 327 KMGERSVVSWTSMIAGYARE-GVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLL 384
           +M + SV+SWT++I GY +   +   AI LF  M+ +G +EP+ +  +S   AC      
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL 444
            +GK V     +  + S+  V+N+++ M+ K   M DA+  F  +  K++VS+NT +   
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449

Query: 445 DLFVAMLQNFE-----------PDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
              +   Q F+               T A +L   A++ ++ +G +IH  +++ G+S ++
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            V NA++ MY KCG +  A  +F+ +  +++ISWT MI G+  HGF    + TFN M + 
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G++P+EV+++++L ACSH GLV EGWR FN M  +  I+PK+EHYACMVDLL R G L++
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A+ FI  MP   D  +W + L  CR+H   +L +  A  + EL+P+    Y+ L+N+YA 
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
           A KWEE  ++R K+  R L K  GCSWIE+  K++ F  G ++HP+A +I   L RL  E
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITE 749

Query: 734 MKREGYFPKTRYALINADEMEKEVA----LCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
           +KR GY P T   L   +E   E      L  HSEK+A+AFG+++    + +RV KNLRV
Sbjct: 750 IKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRV 809

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CGDCH   K++S  + REIVLRD NRFHHFKDG+CSC  +W
Sbjct: 810 CGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 139/583 (23%), Positives = 270/583 (46%), Gaps = 38/583 (6%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKV-----FIWNLLMHEYSKTGNFKESLYLFKK 188
           +  +L+   +  GDL+      + +    +       ++ L+    +  +F+    +  +
Sbjct: 28  VADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHAR 87

Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
           +    I  DS  ++ ++   +  G+S + +D  +       RDVVSW+ M++ Y  NG  
Sbjct: 88  LIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRE 147

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNT 307
              ++VF E L LG   +      V+  C+N   +  GR    F +K   F  ++    +
Sbjct: 148 LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS 207

Query: 308 LLDMYSKC-GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           L+DM+ K     + A +VF+KM E +VV+WT MI    + G    AIR F  MV  G E 
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC---GSMADAE 423
           D + ++S+  ACA    L +GK +H +   + +   +  S  L+DMYAKC   GS+ D  
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCR 325

Query: 424 SVFNQMPVKDIVSWNTMIG-----------ALDLFVAMLQ--NFEPDGVTMACILPACAS 470
            VF++M    ++SW  +I            A++LF  M+   + EP+  T +    AC +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           L+    G+++ G   + G++++ +VAN+++ M+VK   +  A+  F+ +  K+L+S+   
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM---MRY 587
           + G   +     A    +++ +  +     +F S+L   ++ G + +G +  +    +  
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH-HEVKLA 646
            CN +P       ++ + S+ G++  A R    M    +   W S++ G   H   +++ 
Sbjct: 506 SCN-QPVCN---ALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVL 560

Query: 647 EKVAEHVFE-LEPDNTGYYVLL---ANVYAEAEKWEEVKKLRE 685
           E   + + E ++P+   Y  +L   ++V   +E W     + E
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 249/613 (40%), Positives = 356/613 (58%), Gaps = 33/613 (5%)

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            L  +  M  L   VD   + +VL  C+       G+ +H F++K     ++   N L+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 311 MYSKCGDLDGAIRVFEKMGER----------------------SVVSWTSMIAGYAREGV 348
           MYS+CG L  A  +F+KM ER                      S+VSWT+MIAGY R   
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
            +   RLF  M+ E + P+   + S++ +C   G +++GK +H YI  N    SL ++ A
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPD 457
           L+DMY KCG +  A ++F+ M  KD+++W  MI A            LFV M  N   P+
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
            +TM  +L  CA   AL+ G+  H YI + G+  D  +  A++DMY KCG +  A+ LF 
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFS 392

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
               +D+ +W +M+AGYGMHG+G  A+  F +M   G++P++++FI  L+ACSH+GLV E
Sbjct: 393 EAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVE 452

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           G   F  M ++  + PK+EHY CMVDLL R G L EAY+ IE MPV P+  IWG++L  C
Sbjct: 453 GKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAAC 512

Query: 638 RIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPG 697
           +IH    + E  A  +  LEP N GY VL++N+YA A +W +V  +R+ +   G+KK PG
Sbjct: 513 KIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPG 572

Query: 698 CSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEV 757
            S IE+ G V+ F  G ++HP  +KI  +L  +  ++K  GY P T   L N DE EKE 
Sbjct: 573 MSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKET 632

Query: 758 ALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFH 817
           AL  HSEKLAMAFG+++   G  IRV KNLR+C DCH + K +SK  +R I++RD NRFH
Sbjct: 633 ALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFH 692

Query: 818 HFKDGRCSCRGFW 830
           HF++G CSC G+W
Sbjct: 693 HFREGSCSCGGYW 705



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 214/458 (46%), Gaps = 61/458 (13%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           ++D+    S+L+ C+ +     GK++H    ++G+V D                      
Sbjct: 106 EVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSD---------------------- 143

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
                     VF+ N LM  YS+ G+   +  LF KM                    VV 
Sbjct: 144 ----------VFVVNALMQMYSECGSLVSARLLFDKMSERD----------------VVS 177

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
            S  ++    LF   S R +VSW  MI+GYI     E+G  +F  M+      +  TM++
Sbjct: 178 WSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLS 237

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           ++  C   GA+  G+ +HA+ L+  F   ++    L+DMY KCG++  A  +F+ M  + 
Sbjct: 238 LIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKD 297

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           V++WT+MI+ YA+    D A +LF  M   G+ P+   + S+L  CA +G L++GK  H 
Sbjct: 298 VMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHA 357

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           YI +  ++  + +  AL+DMYAKCG ++ A+ +F++   +DI +WN M+           
Sbjct: 358 YIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEK 417

Query: 443 ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIV 500
           AL LF  M     +P+ +T    L AC+    +  G+ +   ++   G+         +V
Sbjct: 418 ALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMV 477

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
           D+  + G+L  A  + + +P    I+ W  M+A   +H
Sbjct: 478 DLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 106/220 (48%), Gaps = 14/220 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            + A I  + +   ++ A ++      + +  +  T  S+L LCA   +L+ GK  H+ I
Sbjct: 300 TWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYI 359

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+ +D  +L + L+ M+  CGD+   +R+F++  +  +  WN++M  Y   G  +++
Sbjct: 360 DKQGVEVD-VILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKA 418

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-----RDVVSWNC 237
           L LF +M++LG+  +  TF   L   +  G    V +   LF+++         V  + C
Sbjct: 419 LKLFTEMETLGVKPNDITFIGALHACSHAG---LVVEGKGLFEKMIHDFGLVPKVEHYGC 475

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           M+      G+ +   E +K + ++    ++A    +L+ C
Sbjct: 476 MVDLLGRAGLLD---EAYKMIESMPVTPNIAIWGAMLAAC 512


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 287/816 (35%), Positives = 421/816 (51%), Gaps = 116/816 (14%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S   ++ +  ILQ    +K    G+ VH  I + G+ +   ++ + + F +   G L+  
Sbjct: 6   SPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTF-YAKTGSLRFA 64

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
             VF+++     F WN L+  Y+K GNF+ S                             
Sbjct: 65  HHVFDEMPLKSTFSWNTLISGYAKQGNFEVS----------------------------- 95

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                     +L  E+ D D VSW  +I GY   G+ +  + +F +M++        T+ 
Sbjct: 96  ---------RRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVS 146

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD-------------- 317
            VLS CA    L  GR +H+F +K      +    +LL+MY+KCGD              
Sbjct: 147 NVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVK 206

Query: 318 -----------------LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                             + A   FEKM +R +VSW SMI+GY+++G    A+ +F  M+
Sbjct: 207 NISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKML 266

Query: 361 RE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG-- 417
            E  ++PD + + SIL ACA    L IGK +H YI   + ++S  V NAL+ MYAK G  
Sbjct: 267 NEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGV 326

Query: 418 ---------------------SMAD----------AESVFNQMPVKDIVSWNTMI----- 441
                                S+ D          A  +FN++  +D+V+W  MI     
Sbjct: 327 EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQ 386

Query: 442 -----GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 AL+LF  M+ +  EP+  T+A +L   +SL  LE G++IH   ++ G S+  +V
Sbjct: 387 NGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSV 446

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPA-KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
            NA++ MY K G + +A+ +FD+    K+++SWT MI     HG G +AI  F  M   G
Sbjct: 447 TNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG 506

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           ++PD ++++ VL AC+H GLV++G +++NMM     IEP L HYACM+DL  R G L EA
Sbjct: 507 MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEA 566

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           Y FIE MP+ PD   WGSLL  C+IH    LA+  AE +  ++P N+G Y+ LANVY+  
Sbjct: 567 YLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC 626

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            KWE   + R+ +  RG++K  G SWI IK +V+ F      HP   +I  L+  +  E+
Sbjct: 627 GKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEI 686

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           K+ G+ P T   L + +E  KE  L  HSEKLA+AFG+LN P    +R+ KNLRVC DCH
Sbjct: 687 KKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCH 746

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              KF+SK   REI++RD+ RFHHFKDG CSCR +W
Sbjct: 747 SAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 250/528 (47%), Gaps = 91/528 (17%)

Query: 61  CKTKNYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKV 118
           C   ++ A I  + + G  + A+ +     SE+      T  ++L  CA  ++L+ G+K+
Sbjct: 105 CDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKI 164

Query: 119 HSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
           HS + + G+     V  + L+ M+  CGD    + VF+++    +  WN L+  Y ++G 
Sbjct: 165 HSFVVKLGLGSCVPV-ATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQ 223

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
           F+ +   F+KM                                       DRD+VSWN M
Sbjct: 224 FELAASQFEKM--------------------------------------PDRDIVSWNSM 245

Query: 239 ISGYIANGVAEKGLEVFKEMLN-LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           ISGY   G   + L +F +MLN      D  T+ ++LS CAN   L  G+ +HA+ L+A 
Sbjct: 246 ISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAE 305

Query: 298 FSKEISFNNTLLDMYSKCGD------------------------LDG---------AIRV 324
                +  N L+ MY+K G                         LDG         A  +
Sbjct: 306 TETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREI 365

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F K+ +R VV+WT+MI GY + G+++ A+ LFR MV EG EP+ Y + ++L   +   +L
Sbjct: 366 FNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTIL 425

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP--VKDIVSWNTMIG 442
           E GK +H    +    S+  V+NAL+ MYAK G++  A+ VF+ +P   K+IVSW +MI 
Sbjct: 426 EHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIM 484

Query: 443 AL----------DLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGIS 490
           AL          +LF  ML    +PD +T   +L AC  +  +E+GR+ +  +   H I 
Sbjct: 485 ALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIE 544

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
              +    ++D+Y + G+L  A    + +P + D I+W  ++A   +H
Sbjct: 545 PTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 134/291 (46%), Gaps = 35/291 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           + A I  + + G    A+E+  L  +E  + ++ T  ++L + + L  LE GK++H+   
Sbjct: 377 WTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAI 436

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK--VFIWNLLMHEYSKTGNFKE 181
           ++G      V  + L+ M+   G++   +RVF+ + NGK  +  W  ++   ++ G  KE
Sbjct: 437 KAGESSTPSVTNA-LIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKE 494

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD--VVSWNCMI 239
           ++ LF++M S+G+  D  T+  VL     VG   + +  + +  E+ + +  +  + CMI
Sbjct: 495 AINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMI 554

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
             Y   G+ +   E +  + ++    D     ++L+ C           +H  A  A  +
Sbjct: 555 DLYGRAGLLQ---EAYLFIESMPIEPDNIAWGSLLASC----------KIHKNADLAKVA 601

Query: 300 KE----ISFNNT-----LLDMYSKCGDLDGAIRVFEKMGERSV-----VSW 336
            E    I   N+     L ++YS CG  + A +  + M +R V     +SW
Sbjct: 602 AERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISW 652


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/642 (40%), Positives = 377/642 (58%), Gaps = 41/642 (6%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           R   SW   +     +    + +  + EM   G   D      VL   +    L  G  +
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 290 HAFALKACF-SKEISFNNTLLDMYSKCGDL--------------------DGAIRVFEKM 328
           HA A+K  + S  ++  NTL++MY KCG +                    D +  +FE  
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            +R +VSW +MI+ +++   F  A+  FR MV EG+E D   I S+L AC+    L++GK
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234

Query: 389 DVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
           ++H Y+ + ND+  + +V +AL+DMY  C  +     VF+ +  + I  WN MI      
Sbjct: 235 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARN 294

Query: 443 -----ALDLFVAMLQ--NFEPDGVTMACILPACA-SLAALERGREIHGYILRHGISADRN 494
                AL LF+ M++     P+  TMA ++PAC  SLAA+ +G+EIH Y +R+ +++D  
Sbjct: 295 GLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDIT 354

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM---- 550
           V +A+VDMY KCG L L+R +F+ +P K++I+W ++I   GMHG G +A+  F +M    
Sbjct: 355 VGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEA 414

Query: 551 -RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
            R    +P+EV+FI+V  ACSHSGL+ EG   F  M+++  +EP  +HYAC+VDLL R G
Sbjct: 415 GRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAG 474

Query: 610 NLSEAYRFIEMMPVAPDAT-IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
            L EAY  +  MP   D    W SLL  CRIH  V+L E  A+++  LEP+   +YVLL+
Sbjct: 475 QLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLS 534

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           N+Y+ A  W +  ++R+ + + G+KK PGCSWIE + +V+ F+AG  SHP ++++   L+
Sbjct: 535 NIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLE 594

Query: 729 RLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLR 788
            L  +M++EGY P T   L N DE EKE  LCGHSEKLA+AFGILN P G TIRV KNLR
Sbjct: 595 TLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 654

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           VC DCH   KF+SK   REI++RD  RFHHFK+G CSC  +W
Sbjct: 655 VCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 251/549 (45%), Gaps = 91/549 (16%)

Query: 16  SPPNQSYGKKFASYKPSTLPIIVSSK----SHSSCTINPISASISKTLVCKTKNYNAEIG 71
           SPP+       +  KP+  P+   +     S S  T + + A  S+T   ++ ++   I 
Sbjct: 22  SPPSLQTQPPPSIQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRT---RSNDFREAIS 78

Query: 72  RFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDD 131
            + E+           +   ++ D   + ++L+  + L+ L+ G+++H+   + G     
Sbjct: 79  TYIEM-----------TVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSS 127

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
             + + LV M+  CG + +           K F  N LM  Y+K G              
Sbjct: 128 VTVANTLVNMYGKCGGIGD-----------KTFTNNALMAMYAKLG-------------- 162

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
                                   RV D+  LF+   DRD+VSWN MIS +  +    + 
Sbjct: 163 ------------------------RVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEA 198

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF-NNTLLD 310
           L  F+ M+  G  +D  T+ +VL  C++   L  G+ +HA+ L+     E SF  + L+D
Sbjct: 199 LAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVD 258

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVY 369
           MY  C  ++   RVF+ +  R +  W +MI+GYAR G+ + A+ LF  M++  G+ P+  
Sbjct: 259 MYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTT 318

Query: 370 AITSILHACACD-GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
            + S++ AC      +  GK++H Y   N + S + V +AL+DMYAKCG +  +  VFN+
Sbjct: 319 TMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNE 378

Query: 429 MPVKDIVSWNTMI----------GALDLFVAMLQ------NFEPDGVTMACILPACASLA 472
           MP K++++WN +I           AL+LF  M+         +P+ VT   +  AC+   
Sbjct: 379 MPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSG 438

Query: 473 ALERGREIHGYILR--HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK--DLISWT 528
            +  G  +  Y ++  HG+    +    +VD+  + G L  A  L + +PA+   + +W+
Sbjct: 439 LISEGLNLF-YRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWS 497

Query: 529 IMIAGYGMH 537
            ++    +H
Sbjct: 498 SLLGACRIH 506


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 271/674 (40%), Positives = 383/674 (56%), Gaps = 43/674 (6%)

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD-----VVSWNCMISGYIANGVAEKG 251
           + + F+ +L   A +G    V DA  LF  +   D     VV+WN M+S  + +G   + 
Sbjct: 199 ERFAFNALLSMYARLG---LVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEA 255

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF-NNTLLD 310
           +EV  +M+  G   D  T  + L  C+    L  GR +HA+ LK       SF  + L+D
Sbjct: 256 IEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVD 315

Query: 311 MYSKCGDLDGAIRVFEKM--GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPD 367
           MY+    +  A RVF+ +  G R +  W +M+ GYA+ G+ + A+ LF  M  E G+ P 
Sbjct: 316 MYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPS 375

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
              I  +L ACA        + VH Y+ +  M  + +V NALMD+YA+ G M  A  +F 
Sbjct: 376 ETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFA 435

Query: 428 QMPVKDIVSWNTMI----------GALDLFVAMLQNFE-------------------PDG 458
            +  +D+VSWNT+I           A  L   M Q                      P+ 
Sbjct: 436 AIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNN 495

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           VT+  +LP CA LAA  +G+EIHGY +RH + +D  V +A+VDMY KCG L L+R++FD 
Sbjct: 496 VTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDR 555

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDE 577
           +P +++I+W ++I  YGMHG G +AIA F+ M  +   +P+EV+FI+ L ACSHSG+VD 
Sbjct: 556 LPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDR 615

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM-PVAPDATIWGSLLCG 636
           G   F+ M+    ++P  + +AC VD+L R G L EAY  I  M P     + W S L  
Sbjct: 616 GMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGA 675

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
           CR+H  V L E  AE +F+LEPD   +YVLL N+Y+ A  WE+  ++R ++ +RG+ K P
Sbjct: 676 CRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEP 735

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
           GCSWIE+ G ++ F+AG S+HP +  + + +  L   M+ +GY P T   L + +E EK 
Sbjct: 736 GCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKA 795

Query: 757 VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
             L  HSEKLA+AFG+L  P G TIRV KNLRVC DCHE AKF+S+   REIVLRD  RF
Sbjct: 796 AILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRF 855

Query: 817 HHFKDGRCSCRGFW 830
           HHF DG CSC  +W
Sbjct: 856 HHFVDGACSCGDYW 869



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 152/601 (25%), Positives = 262/601 (43%), Gaps = 81/601 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADL-KSLEDGKKVHSI 121
            +N+ I   C       A++ L     E   + + T  S+L  C+ L + L  G++ H+ 
Sbjct: 129 TFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAF 188

Query: 122 ICESGIVIDDGVLG-SKLVFMFVTCGDLKEGRRVFNKIDN-----GKVFIWNLLMHEYSK 175
             ++G +  D     + L+ M+   G + + + +F  +D      G V  WN ++    +
Sbjct: 189 ALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQ 248

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSC--------------------VLKCLAVVGNS- 214
           +G   E++ +   M + G+  D  TF+                     VLK   +  NS 
Sbjct: 249 SGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSF 308

Query: 215 ------------RRVKDAHKLFDELS--DRDVVSWNCMISGYIANGVAEKGLEVFKEM-L 259
                        RV  A ++FD +    R +  WN M+ GY   G+ E+ LE+F  M  
Sbjct: 309 VASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEA 368

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
             G      T+  VL  CA         AVH + LK   +      N L+D+Y++ GD++
Sbjct: 369 EAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDME 428

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG---------------- 363
            A  +F  +  R VVSW ++I G   +G    A +L R M ++G                
Sbjct: 429 AARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDE 488

Query: 364 --IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
             + P+   + ++L  CA       GK++H Y   + + S + V +AL+DMYAKCG +A 
Sbjct: 489 EPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLAL 548

Query: 422 AESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFE--PDGVTMACILPACA 469
           + +VF+++P +++++WN +I           A+ LF  M+ + E  P+ VT    L AC+
Sbjct: 549 SRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACS 608

Query: 470 SLAALERGREI-HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLIS- 526
               ++RG E+ H     HG+    ++    VD+  + G L  A S+   M P +  +S 
Sbjct: 609 HSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSA 668

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS-FISVLYACSHSGLVDEGWRFFNMM 585
           W+  +    +H      +      R   +EPDE S ++ +    S +GL ++     N M
Sbjct: 669 WSSFLGACRLH--RNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRM 726

Query: 586 R 586
           R
Sbjct: 727 R 727



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 203/404 (50%), Gaps = 39/404 (9%)

Query: 282 ALMFGRAVHAFALKA----CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           +L+  R++H  AL+      F+  ++  N LL  Y++CGDL  A+ +F  M  R  V++ 
Sbjct: 74  SLIAVRSIHGAALRRDLLHGFTPAVA--NALLTAYARCGDLTAALALFNAMPSRDAVTFN 131

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA-CDGLLEIGKDVHDYIKE 396
           S+IA       +  A+   R M+ EG     + + S+L AC+     L +G++ H +  +
Sbjct: 132 SLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALK 191

Query: 397 NDM--QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD-----IVSWNTMIG------- 442
           N        +  NAL+ MYA+ G + DA+ +F  +   D     +V+WNTM+        
Sbjct: 192 NGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGR 251

Query: 443 ---ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHG-ISADRNVAN 497
              A+++   M+ +   PDG+T A  LPAC+ L  L  GRE+H Y+L+   ++A+  VA+
Sbjct: 252 CGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVAS 311

Query: 498 AIVDMYVKCGVLVLARSLFDMIPA--KDLISWTIMIAGYGMHGFGCDAIATFNDMR-QAG 554
           A+VDMY     + +AR +FDM+P   + L  W  M+ GY   G   +A+  F  M  +AG
Sbjct: 312 ALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAG 371

Query: 555 IEPDEVSFISVLYACSHSGLV--DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           + P E +   VL AC+ S      E    + + R   +  P +++   ++DL +R G++ 
Sbjct: 372 VVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMAD-NPFVQN--ALMDLYARLGDM- 427

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGC----RIHHEVKLAEKVAEH 652
           EA R+I       D   W +L+ GC     IH   +L  ++ + 
Sbjct: 428 EAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQ 471



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 150/318 (47%), Gaps = 30/318 (9%)

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFV-----------AMLQN 453
           V+NAL+  YA+CG +  A ++FN MP +D V++N++I AL LF             +L+ 
Sbjct: 98  VANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEG 157

Query: 454 FEPDGVTMACILPACASLAA-LERGREIHGYILRHG-ISADRNVA-NAIVDMYVKCGVLV 510
                 T+  +L AC+ LA  L  GRE H + L++G +  D   A NA++ MY + G++ 
Sbjct: 158 HPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVD 217

Query: 511 LARSLFDMI-----PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
            A+ LF  +     P   +++W  M++     G   +AI    DM   G+ PD ++F S 
Sbjct: 218 DAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASA 277

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA- 624
           L ACS   ++  G      +  + ++       + +VD+ +    +  A R  +M+P   
Sbjct: 278 LPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGH 337

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE------PDNTGYYVLLANVYAEAEKWE 678
               +W +++CG   + +  + E+  E    +E      P  T    +L    A +E + 
Sbjct: 338 RQLGLWNAMVCG---YAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPAC-ARSETFA 393

Query: 679 EVKKLREKISRRGLKKNP 696
             + +   + +RG+  NP
Sbjct: 394 GKEAVHGYVLKRGMADNP 411



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 98/444 (22%), Positives = 174/444 (39%), Gaps = 73/444 (16%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSK---IDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +NA +  + + G  E+A+E+    E          T   +L  CA  ++    + VH  +
Sbjct: 343 WNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYV 402

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+  D+  + + L+ ++   GD++  R +F  I+   V  WN L+      G+  ++
Sbjct: 403 LKRGMA-DNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDA 461

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
             L ++MQ  G   D+ T         + G            +E    + V+   ++ G 
Sbjct: 462 FQLVREMQQQGRFTDATTED------GIAGTD----------EEPVVPNNVTLMTLLPGC 505

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
                  KG E+    +    + D+A    ++   A CG L   RAV     K    + +
Sbjct: 506 AMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPK----RNV 561

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKM-----GERSVVSWTSMIAGYAREGVFDGAIRLFR 357
              N L+  Y   G  D AI +F++M      + + V++ + +A  +  G+ D  + LF 
Sbjct: 562 ITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFH 621

Query: 358 GMVR-EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
            M R  G++P     T  LHACA D L   G+                    L + Y+  
Sbjct: 622 SMKRNHGVQP-----TPDLHACAVDILGRAGR--------------------LDEAYSII 656

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIGALDLF---------VAMLQNFEPDGVTMACILPA 467
            SM   E        + + +W++ +GA  L             L   EPD  +   +L  
Sbjct: 657 TSMEPGE--------QQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCN 708

Query: 468 CASLAAL-ERGREIHGYILRHGIS 490
             S A L E+  E+   + + G+S
Sbjct: 709 IYSAAGLWEKSSEVRNRMRQRGVS 732



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 107/282 (37%), Gaps = 60/282 (21%)

Query: 466 PACASLAALER---GREIHGYILR----HGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           PA  S AAL      R IHG  LR    HG +    VANA++  Y +CG L  A +LF+ 
Sbjct: 64  PAAKSAAALRSLIAVRSIHGAALRRDLLHGFTP--AVANALLTAYARCGDLTAALALFNA 121

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH------- 571
           +P++D +++  +IA   +      A+    DM   G      + +SVL ACSH       
Sbjct: 122 MPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRL 181

Query: 572 -------------------------------SGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
                                           GLVD+    F  +    +    +  +  
Sbjct: 182 GREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNT 241

Query: 601 MVDLLSRTGNLSEAYRFIEMM---PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           MV LL ++G   EA   I  M    V PD   + S L  C     + L  ++  +V +  
Sbjct: 242 MVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDS 301

Query: 658 PDNTGYYV--LLANVYAEAEKWEEVKKLREKISRRGLKKNPG 697
                 +V   L ++YA  E        R  ++RR     PG
Sbjct: 302 DLAANSFVASALVDMYASHE--------RVGVARRVFDMVPG 335


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 281/815 (34%), Positives = 423/815 (51%), Gaps = 81/815 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+ ++L  C+    + +G+ +H  I  S     D ++G+ L+ M+  C  L + R V
Sbjct: 6   DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFE-RDTMVGNALISMYGKCDSLVDARSV 64

Query: 155 FNKID--NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           F  +D     V  WN ++  Y++ G+  E+L L+ +M   G+  D  TF  VL   + + 
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124

Query: 213 NSRR-----------------------------VKDAHKLFDELSDRDVVSWNCMISGYI 243
             R                              V DA ++F  L  RD  SWN +I  + 
Sbjct: 125 QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHS 184

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            +G     L +FKEM       +  T + V+SG +    L  GR +HA  +   F  ++ 
Sbjct: 185 QSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLV 243

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               L++MY KCG    A  VF+KM +R +VSW  MI  Y + G F  A+ L++ +  EG
Sbjct: 244 VATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEG 303

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
            +       SIL AC+    L  G+ VH +I E  + S + V+ AL++MYAKCGS+ +A 
Sbjct: 304 FKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEAR 363

Query: 424 SVFNQMPVKDIVSWNTMIGALD----------------------------LFVAMLQN-- 453
            VFN M  +D V+W+T+IGA                              +    +QN  
Sbjct: 364 KVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGC 423

Query: 454 ----------------FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                            +PD VT   +L ACASL  L   + +H  I    + ++  V N
Sbjct: 424 AVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTN 483

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
            +++MY +CG L  A  LF     K ++SWT M+A +  +G   +A+  F +M   G++P
Sbjct: 484 TLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKP 543

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           D+V++ S+L+ C+H G +++GWR+F  M     + P  +H+A MVDLL R+G L +A   
Sbjct: 544 DDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKEL 603

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           +E MP  PD   W + L  CRIH +++L E  AE V+EL+P +T  Y+ ++N+YA    W
Sbjct: 604 LESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMW 663

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
           E+V  +R+K+  RGLKK PG S+IE+ GK++ F +GG  HP   +I   L RL   M+  
Sbjct: 664 EKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAA 723

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL-NLPAGQTIRVTKNLRVCGDCHEM 796
           GY P T+  L +  E EKE  L  HSEK+A+AFG++ +  +G+ IRV KNLRVC DCH  
Sbjct: 724 GYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTA 783

Query: 797 AKFMSKTARREIVLRDSNRFHHF-KDGRCSCRGFW 830
            KF+++ A R+I+LRD NRFH F  DG+CSC  +W
Sbjct: 784 TKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 272/557 (48%), Gaps = 89/557 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY---SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++NA I  + + G+  +A+ VLY   + +    D  T+ S+L  C+   SL  G+++H+ 
Sbjct: 77  SWNAMIAAYAQNGHSTEAL-VLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNR 132

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +  SG+      L + LV M+   G + + +R+F  +       WN ++  +S++G++  
Sbjct: 133 VFYSGLDSFQS-LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSG 191

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLA---VVGNSRRV--------------------- 217
           +L +FK+M+   +  +S T+  V+   +   V+   R++                     
Sbjct: 192 ALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALIN 250

Query: 218 --------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                    +A ++FD++  RD+VSWN MI  Y+ NG   + LE+++++   GF    AT
Sbjct: 251 MYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKAT 310

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V++L  C++  AL  GR VH+  L+     E++    L++MY+KCG L+ A +VF  M 
Sbjct: 311 FVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK 370

Query: 330 ERSVVSWTSMIAGYAREG----------VFD------------------------GAIRL 355
            R  V+W+++I  YA  G          VFD                         A+++
Sbjct: 371 NRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKI 430

Query: 356 FRGMV-REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           FR M    G++PD     ++L ACA  G L   K +H  I E++++S++ V+N L++MYA
Sbjct: 431 FREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYA 490

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMAC 463
           +CGS+ +AE +F     K +VSW  M+           ALDLF  M L+  +PD VT   
Sbjct: 491 RCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTS 550

Query: 464 ILPACASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-A 521
           IL  C    +LE+G R        HG++   +   A+VD+  + G L  A+ L + +P  
Sbjct: 551 ILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFE 610

Query: 522 KDLISWTIMIAGYGMHG 538
            D ++W   +    +HG
Sbjct: 611 PDPVAWMTFLTACRIHG 627



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 151/303 (49%), Gaps = 25/303 (8%)

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           +PD     ++L +C+  G +  G+ +H+ I+ +  +    V NAL+ MY KC S+ DA S
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 425 VFNQMP--VKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
           VF  M    +++VSWN MI           AL L+  M LQ    D VT   +L AC+SL
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           A   +GREIH  +   G+ + +++ANA+V MY + G +  A+ +F  +  +D  SW  +I
Sbjct: 124 A---QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
             +   G    A+  F +M+   ++P+  ++I+V+   S   ++ EG R  +        
Sbjct: 181 LAHSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEG-RKIHAEIVANGF 238

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI-----HHEVKLA 646
           +  L     ++++  + G+  EA    + M    D   W +++ GC +     H  ++L 
Sbjct: 239 DSDLVVATALINMYGKCGSSHEAREVFDKMK-KRDMVSW-NVMIGCYVQNGDFHEALELY 296

Query: 647 EKV 649
           +K+
Sbjct: 297 QKL 299



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 13/278 (4%)

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
           +PD VT   +L +C+S   +  GR +H  I       D  V NA++ MY KC  LV ARS
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 515 LFDMIP--AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           +F+ +    ++++SW  MIA Y  +G   +A+  +  M   G+  D V+F+SVL ACS  
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
             + +G    N + Y   ++        +V + +R G++ +A R  + +    D T W +
Sbjct: 123 --LAQGREIHNRVFYS-GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQT-RDETSWNA 178

Query: 633 LLCGCRIHHEVKLAEKV-AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           ++       +   A ++  E   +++P++T Y  +++  ++  E   E +K+  +I   G
Sbjct: 179 VILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISG-FSTPEVLPEGRKIHAEIVANG 237

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
              +     +     +N++   GSSH   +  + + KR
Sbjct: 238 FDSD----LVVATALINMYGKCGSSHEAREVFDKMKKR 271


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/628 (41%), Positives = 386/628 (61%), Gaps = 13/628 (2%)

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTV 273
           RR  DA ++FD +  RD V+WN +++GY  NG+A   +E+   M    G   D  T+V+V
Sbjct: 108 RRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSV 167

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L  CAN  AL   R  HAFA+++   + ++    +LD Y KCGD+  A  VF+ M  ++ 
Sbjct: 168 LPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNS 227

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSW +MI GYA+ G    A+ LF  MV EG++    ++ + L AC   G L+ G  VH+ 
Sbjct: 228 VSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHEL 287

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GA 443
           +    + S++ V NAL+ MY+KC  +  A  VF+++  +  VSWN MI           A
Sbjct: 288 LVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDA 347

Query: 444 LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           + LF  M L+N +PD  T+  ++PA A ++   + R IHGY +R  +  D  V  A++DM
Sbjct: 348 VRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 407

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG + +AR LF+    + +I+W  MI GYG HGFG  A+  F +M+  GI P+E +F
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           +SVL ACSH+GLVDEG  +F  M+ +  +EP +EHY  MVDLL R G L EA+ FI+ MP
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + P  +++G++L  C++H  V+LAE+ A+ +FEL P    Y+VLLAN+YA A  W++V +
Sbjct: 528 MDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVAR 587

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R  + + GL+K PG S I++K +++ F +G ++H  AK+I S L +L  E+K  GY P 
Sbjct: 588 VRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPD 647

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           T       D+++ ++ L  HSEKLA+AFG++    G TI++ KNLRVC DCH   K +S 
Sbjct: 648 TDSIHDVEDDVKAQL-LNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISL 706

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REI++RD  RFHHFKDG+CSC  +W
Sbjct: 707 VTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 216/481 (44%), Gaps = 46/481 (9%)

Query: 85  VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT 144
           V  SS  +    +T+ S+L+LCA    L  G+ VH+ +   GI   + +  + L  M+  
Sbjct: 48  VAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGI-DSEALAATALANMYAK 106

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSC 203
           C    + RRVF+++       WN L+  Y++ G  + ++ +  +MQ   G   DS T   
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166

Query: 204 VLKCLAVVGNSRRVKDAHK--------------------------------LFDELSDRD 231
           VL   A        ++AH                                 +FD +  ++
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
            VSWN MI GY  NG + + L +F  M+  G +V   +++  L  C   G L  G  VH 
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
             ++      +S  N L+ MYSKC  +D A  VF+++  R+ VSW +MI G A+ G  + 
Sbjct: 287 LLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSED 346

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           A+RLF  M  E ++PD + + S++ A A        + +H Y     +   +YV  AL+D
Sbjct: 347 AVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALID 406

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVT 460
           MYAKCG +  A  +FN    + +++WN MI           A++LF  M      P+  T
Sbjct: 407 MYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETT 466

Query: 461 MACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
              +L AC+    ++ GRE    +   +G+         +VD+  + G L  A +    +
Sbjct: 467 FLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKM 526

Query: 520 P 520
           P
Sbjct: 527 P 527



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 168/332 (50%), Gaps = 12/332 (3%)

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            L  F  M + G    L T  ++L  CA  G L  GRAVHA         E      L +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL-FRGMVREGIEPDVY 369
           MY+KC     A RVF++M  R  V+W +++AGYAR G+   A+ +  R    EG  PD  
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            + S+L ACA    L   ++ H +   + ++  + V+ A++D Y KCG +  A  VF+ M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGR 478
           P K+ VSWN MI           AL LF  M++   +   V++   L AC  L  L+ G 
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
            +H  ++R G+ ++ +V NA++ MY KC  + LA  +FD +  +  +SW  MI G   +G
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
              DA+  F  M+   ++PD  + +SV+ A +
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALA 374



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 154/299 (51%), Gaps = 14/299 (4%)

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A+  F  M   G  P +   TS+L  CA  G L  G+ VH  +    + S    + AL 
Sbjct: 42  AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN--FEPDG 458
           +MYAKC   ADA  VF++MPV+D V+WN ++           A+++ V M +     PD 
Sbjct: 102 NMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           +T+  +LPACA+  AL   RE H + +R G+    NVA AI+D Y KCG +  AR +FD 
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +P K+ +SW  MI GY  +G   +A+A FN M + G++  +VS ++ L AC   G +DEG
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
            R   ++     ++  +     ++ + S+   +  A    + +      + W +++ GC
Sbjct: 282 MRVHELL-VRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS-WNAMILGC 338



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 196/419 (46%), Gaps = 40/419 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +NA +  +   G    AME+   +   E  + D+ T  S+L  CA+ ++L   ++ H+  
Sbjct: 128 WNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFA 187

Query: 123 CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             SG+  ++ V + + ++  +  CGD++  R VF+ +       WN ++  Y++ G+ +E
Sbjct: 188 IRSGL--EELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSRE 245

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVG----------------------------- 212
           +L LF +M   G+     +    L+    +G                             
Sbjct: 246 ALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALIT 305

Query: 213 ---NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                +RV  A  +FDEL  R  VSWN MI G   NG +E  + +F  M       D  T
Sbjct: 306 MYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFT 365

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V+V+   A+    +  R +H ++++    +++     L+DMY+KCG ++ A  +F    
Sbjct: 366 LVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSAR 425

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ER V++W +MI GY   G    A+ LF  M   GI P+     S+L AC+  GL++ G++
Sbjct: 426 ERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE 485

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALDL 446
               +KE+  ++  +     ++D+  + G + +A +   +MP+   +S +  M+GA  L
Sbjct: 486 YFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKL 544


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 287/819 (35%), Positives = 419/819 (51%), Gaps = 121/819 (14%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID----DGVLGSKLVFMFVTCGDLKE 150
           D+     +LQ C    +   G+ +H+   ++G++      + +L           G  +E
Sbjct: 22  DSDHCARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFRE 81

Query: 151 GRRVFNKIDNGK--VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
            RR+F++I   +  VF WN L+  Y+K+G                               
Sbjct: 82  ARRLFDEIPAAQRNVFTWNSLLSLYAKSG------------------------------- 110

Query: 209 AVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                  R+ DA  +F E+ +RD VSW  M+ G    G   + +++F +M+  G +    
Sbjct: 111 -------RLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQF 163

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+  VLS CA   A   GR VH+F +K   S  +   N++L+MY KCGD + A  VFE+M
Sbjct: 164 TLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERM 223

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI------------------------ 364
            ERSV SW +M++  A  G  D A+ LF  M    I                        
Sbjct: 224 PERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFS 283

Query: 365 --------EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
                    PD + ITS+L ACA  G++ IGK VH YI  + M     V+NAL+ MYAK 
Sbjct: 284 RMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKS 343

Query: 417 GSMADAESVFNQ---------------------------------MPVKDIVSWNTMI-- 441
           GS+ +A  V  Q                                 M  +D+V+W  MI  
Sbjct: 344 GSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVG 403

Query: 442 --------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    A++LF  M+++  EP+  T+A +L  CASLA LE G++IH   +R      
Sbjct: 404 YEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQS 463

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
            +V+N+IV MY + G L  AR +FD +   K+ ++WT MI     HG G DA+  F +M 
Sbjct: 464 SSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEML 523

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
           + G++PD ++F+ VL AC+H G VDEG R+F  ++ +  I P++ HYACMVDLL+R G  
Sbjct: 524 RVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLF 583

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
           SEA  FI+ MPV PDA  WGSLL  CR+H    LAE  AE +  ++P N+G Y  L+NVY
Sbjct: 584 SEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVY 643

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           +   +W +  K+ ++   + +KK  G SW  I  +V++F A    HP    +     ++ 
Sbjct: 644 SACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMW 703

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
            ++K+ G+ P  +  L + D+  KE  L  HSEKLA+AFG+++ P   T+R+ KNLRVC 
Sbjct: 704 DDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCN 763

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   KF+SK A REI+LRD+ RFHHFKDG CSC+ +W
Sbjct: 764 DCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 98/439 (22%), Positives = 166/439 (37%), Gaps = 104/439 (23%)

Query: 65  NYNAEIGRFCEVGNLEKAM---EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++NA I  + + G   KA+     + S      D  T  S+L  CA+L  +  GK+VH+ 
Sbjct: 261 SWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAY 320

Query: 122 ICESGI-------------------------VIDDGVLG-------SKLVFMFVTCGDLK 149
           I  S +                         V+   V+        + L+  +V  GD+K
Sbjct: 321 ILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMK 380

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK--- 206
             R +F+ + N  V  W  ++  Y + G+  E++ LF+ M   G   +SYT + VL    
Sbjct: 381 HAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCA 440

Query: 207 ---CL--------------------------AVVGNSRRVKDAHKLFDELSDR-DVVSWN 236
              CL                           +   S  +  A ++FD +  R + V+W 
Sbjct: 441 SLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWT 500

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALK 295
            MI     +G+ E  + +F+EML +G   D  T V VLS C + G +  G R       K
Sbjct: 501 SMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDK 560

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
                E+S    ++D+ ++ G    A    ++M                           
Sbjct: 561 HGIVPEMSHYACMVDLLARAGLFSEAQEFIQQM--------------------------- 593

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
                   +EPD  A  S+L AC      ++ +   + +   D  +S   S AL ++Y+ 
Sbjct: 594 -------PVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYS-ALSNVYSA 645

Query: 416 CGSMADAESVFNQMPVKDI 434
           CG   DA  ++ +   K +
Sbjct: 646 CGRWNDAAKIWKRRKDKSV 664


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 258/638 (40%), Positives = 378/638 (59%), Gaps = 47/638 (7%)

Query: 204  VLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
            +++  AV G     +    +FDE+  ++VV +N MI  Y+ N +    L VFK M   G 
Sbjct: 1066 LMRAYAVCGEPWSTR---HIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGI 1122

Query: 264  NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
            + D  T   VL   +    L  G  +HA  ++      +   N L+ MY KCG L  A R
Sbjct: 1123 DPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACR 1182

Query: 324  VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
            V ++M  R VVSW S++AG AR G FD A+ + + M   G++PD   + S+L A      
Sbjct: 1183 VLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA------ 1236

Query: 384  LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
                                 V+N  +D      +++  + +F ++  K +VSWN MI  
Sbjct: 1237 ---------------------VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAV 1269

Query: 443  ---------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                     A+D+F+ M  +  +PD +++A +LPAC  L+AL  GR IH Y++R  +  +
Sbjct: 1270 YMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPN 1329

Query: 493  RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
              + NA++DMY KCG L  AR +FD +  +D++SWT MI+ YGM+G G DA++ F+ M+ 
Sbjct: 1330 LLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQD 1389

Query: 553  AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
             G+ PD ++F+SVL ACSH+GL+DEG  +F +M  EC I P++EH+ CMVDLL R G + 
Sbjct: 1390 LGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVD 1449

Query: 613  EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
            EAY FI+ MP+ P+  +WG+LL  CR++  + +    A+ +F+L P+ +GYYVLL+N+YA
Sbjct: 1450 EAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYA 1509

Query: 673  EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
            +A +WE+V  +R  +  +G+KK PG S  E+  +V+ F+AG  SHP +K+I   L  L  
Sbjct: 1510 KAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVG 1569

Query: 733  EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
            +MK  GY P+T  AL + +E +KE  L  HSEKLA+AF ILN   G  IR+TKNLRVCGD
Sbjct: 1570 KMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGD 1629

Query: 793  CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            CH  AK +SK   REI +RD+NRFHHF +G CSC  +W
Sbjct: 1630 CHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 194/427 (45%), Gaps = 80/427 (18%)

Query: 96   TKTYC-SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
            T+  C  IL    D+K L   KK+HS IC    +  +  LG KL+  +  CG+    R +
Sbjct: 1026 TENLCGQILDKNPDIKYL---KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHI 1082

Query: 155  FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------- 207
            F++I    V  +N+++  Y     + ++L +FK M   GI  D YT+ CVLK        
Sbjct: 1083 FDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDL 1142

Query: 208  -------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                     +++ G    + +A ++ DZ+  RDVVSWN +++G 
Sbjct: 1143 WVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGC 1202

Query: 243  IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
              NG  +  LEV KEM  LG   D  TM ++L                            
Sbjct: 1203 ARNGQFDDALEVCKEMELLGLKPDAGTMASLLP--------------------------- 1235

Query: 303  SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
            +  NT LD  S   ++      F K+  +S+VSW  MIA Y    +   A+ +F  M   
Sbjct: 1236 AVTNTCLDNVSFVKEM------FMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDH 1289

Query: 363  GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
             ++PD  +I S+L AC     L +G+ +H+Y+    +Q +L + NAL+DMYAKCG +  A
Sbjct: 1290 AVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYA 1349

Query: 423  ESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASL 471
              VF+QM  +D+VSW +MI           A+ LF  M      PD +    +L AC+  
Sbjct: 1350 REVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHA 1409

Query: 472  AALERGR 478
              L+ GR
Sbjct: 1410 GLLDEGR 1416



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 193/361 (53%), Gaps = 8/361 (2%)

Query: 95   DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
            D  TY  +L+  +  + L  G ++H+ +   G+ ++  V G+ L+ M+  CG L E  RV
Sbjct: 1125 DHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV-GNGLISMYGKCGCLVEACRV 1183

Query: 155  FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--VVG 212
             +++    V  WN L+   ++ G F ++L + K+M+ LG+  D+ T + +L  +    + 
Sbjct: 1184 LDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLD 1243

Query: 213  NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
            N   VK+   +F +L+++ +VSWN MI+ Y+ N +  + +++F +M +   + D  ++ +
Sbjct: 1244 NVSFVKE---MFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIAS 1300

Query: 273  VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
            VL  C +  AL+ GR +H + ++      +   N L+DMY+KCG L+ A  VF++M  R 
Sbjct: 1301 VLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRD 1360

Query: 333  VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
            VVSWTSMI+ Y   G    A+ LF  M   G+ PD  A  S+L AC+  GLL+ G+    
Sbjct: 1361 VVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFK 1420

Query: 393  YIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLFVAM 450
             + E   +   +     ++D+  + G + +A     QMP++ +   W  ++ A  ++  M
Sbjct: 1421 LMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNM 1480

Query: 451  L 451
            +
Sbjct: 1481 I 1481



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 9/198 (4%)

Query: 478  REIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
            +++H  I + H + ++ ++   ++  Y  CG     R +FD IP K+++ + +MI  Y  
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 1103

Query: 537  HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
            +    DA+  F +M   GI+PD  ++  VL A S S   ++ W    +      +   L 
Sbjct: 1104 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGS---EDLWVGMQIHAAVVRVGLDLN 1160

Query: 597  HYA--CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE--H 652
             +    ++ +  + G L EA R ++ MP   D   W SL+ GC  + +   A +V +   
Sbjct: 1161 VFVGNGLISMYGKCGCLVEACRVLDZMPCR-DVVSWNSLVAGCARNGQFDDALEVCKEME 1219

Query: 653  VFELEPDNTGYYVLLANV 670
            +  L+PD      LL  V
Sbjct: 1220 LLGLKPDAGTMASLLPAV 1237


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 269/729 (36%), Positives = 424/729 (58%), Gaps = 49/729 (6%)

Query: 123 CESGIVIDDG------VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
           CES + + +G      V  + ++  +++       R+VF K+ +  +  WN+++  Y K 
Sbjct: 76  CESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKN 135

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWN 236
           GN   +  LF +M       D  +++ +L   A  G    V++A K+FD++  ++ +SWN
Sbjct: 136 GNLSAARALFNQMPE----KDVVSWNAMLSGFAQNG---FVEEARKIFDQMLVKNEISWN 188

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            ++S Y+ NG  E    +F   ++     ++ +   ++ G      L   R++     + 
Sbjct: 189 GLLSAYVQNGRIEDARRLFDSKMDW----EIVSWNCLMGGYVRKKRLDDARSLFD---RM 241

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
               +IS+N  ++  Y++ G L  A R+FE++  R V +WT+M++G+ + G+ D A R+F
Sbjct: 242 PVRDKISWN-IMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIF 300

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M     E +  +  +++        +E  +++ D +   +  S     N ++  YA+C
Sbjct: 301 EEMP----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSW----NTMVTGYAQC 352

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEPDG-----VTM 461
           G++  A+ +F++MP +D +SW  MI           AL LF+ M    + DG       +
Sbjct: 353 GNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKM----KRDGGILNRSAL 408

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
           AC L +CA +AALE G+++HG +++ G        NA++ MY KCG +  A  +F+ I  
Sbjct: 409 ACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE 468

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           KD++SW  MIAGY  HGFG +A+A F  M+   I+PD+V+ + VL ACSH+GLVD+G  +
Sbjct: 469 KDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEY 527

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           FN M     I    +HY CM+DLL R G L EA   ++ MP  PDA  WG+LL   RIH 
Sbjct: 528 FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHG 587

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
           + +L EK AE VFE+EPDN+G YVLL+N+YA + +W EV+++R K+  +G+KK PG SW+
Sbjct: 588 DTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWV 647

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCG 761
           EI+ K +IF  G  SHP A++I + L+ L LE+K++G+   T+  L + +E EKE  L  
Sbjct: 648 EIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKY 707

Query: 762 HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKD 821
           HSEKLA+AFGIL++P G+ IRV KNLRVC DCH   K +SK  +R+I++RDSNRFHHF +
Sbjct: 708 HSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSE 767

Query: 822 GRCSCRGFW 830
           G CSC  +W
Sbjct: 768 GSCSCGDYW 776



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 203/471 (43%), Gaps = 61/471 (12%)

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           D D+V WN  IS Y+  G  E  L VF  M          T   ++SG  +       R 
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRS----TVTYNAMISGYLSNNKFDCARK 112

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           V     +    +++   N +L  Y K G+L  A  +F +M E+ VVSW +M++G+A+ G 
Sbjct: 113 V----FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGF 168

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
            + A ++F  M+   ++ ++ +   +L A   +G +E  + + D    + M   +   N 
Sbjct: 169 VEEARKIFDQML---VKNEI-SWNGLLSAYVQNGRIEDARRLFD----SKMDWEIVSWNC 220

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL-------------------DLF-- 447
           LM  Y +   + DA S+F++MPV+D +SWN MI                      D+F  
Sbjct: 221 LMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAW 280

Query: 448 VAMLQNFEPDG-----------------VTMACILPACASLAALERGREIHGYILRHGIS 490
            AM+  F  +G                 V+   ++        +E+ RE+   +     S
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTS 340

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
           +     N +V  Y +CG +  A+ LFD +P +D ISW  MI+GY   G   +A+  F  M
Sbjct: 341 S----WNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKM 396

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
           ++ G   +  +    L +C+    ++ G +    +  +   +        ++ +  + G+
Sbjct: 397 KRDGGILNRSALACALSSCAEIAALELGKQLHGRL-VKAGFQTGYIAGNALLAMYGKCGS 455

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV-FELEPDN 660
           + EA+   E +    D   W +++ G   H   K A  + E +   ++PD+
Sbjct: 456 IEEAFDVFEDI-TEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDD 505



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 15/217 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSK--IDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G  E+A+ +    ++    ++       L  CA++ +LE GK++H  +
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRL 431

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G      + G+ L+ M+  CG ++E   VF  I    +  WN ++  Y++ G  KE+
Sbjct: 432 VKAGFQT-GYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWN-----C 237
           L LF+ M+ + I  D  T   VL   +  G    V    + F+ +     ++ N     C
Sbjct: 491 LALFESMK-MTIKPDDVTLVGVLSACSHTG---LVDKGMEYFNSMYQNYGITANAKHYTC 546

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           MI      G  ++ L + K M    F  D AT   +L
Sbjct: 547 MIDLLGRAGRLDEALNLMKSM---PFYPDAATWGALL 580


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/628 (41%), Positives = 386/628 (61%), Gaps = 13/628 (2%)

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTV 273
           RR  DA ++FD +  RD V+WN +++GY  NG+A   +E+   M    G   D  T+V+V
Sbjct: 108 RRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSV 167

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L  CAN  AL   R  HAFA+++   + ++    +LD Y KCGD+  A  VF+ M  ++ 
Sbjct: 168 LPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNS 227

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSW +MI GYA+ G    A+ LF  MV EG++    ++ + L AC   G L+ G  VH+ 
Sbjct: 228 VSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHEL 287

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GA 443
           +    + S++ V NAL+ MY+KC  +  A  VF+++  +  VSWN MI           A
Sbjct: 288 LVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDA 347

Query: 444 LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           + LF  M L+N +PD  T+  ++PA A ++   + R IHGY +R  +  D  V  A++DM
Sbjct: 348 VRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 407

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG + +AR LF+    + +I+W  MI GYG HGFG  A+  F +M+  GI P+E +F
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           +SVL ACSH+GLVDEG  +F  M+ +  +EP +EHY  MVDLL R G L EA+ FI+ MP
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + P  +++G++L  C++H  V+LAE+ A+ +FEL P    Y+VLLAN+YA A  W++V +
Sbjct: 528 MDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVAR 587

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R  + + GL+K PG S I++K +++ F +G ++H  AK+I S L +L  E+K  GY P 
Sbjct: 588 VRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPD 647

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           T       D+++ ++ L  HSEKLA+AFG++    G TI++ KNLRVC DCH   K +S 
Sbjct: 648 TDSIHDVEDDVKAQL-LNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISL 706

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REI++RD  RFHHFKDG+CSC  +W
Sbjct: 707 VTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 216/481 (44%), Gaps = 46/481 (9%)

Query: 85  VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT 144
           V  SS  +    +T+ S+L+LCA    L  G+ VH+ +   GI   + +  + L  M+  
Sbjct: 48  VAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGI-DSEALAATALANMYAK 106

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSC 203
           C    + RRVF+++       WN L+  Y++ G  + ++ +  +MQ   G   DS T   
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166

Query: 204 VLKCLAVVGNSRRVKDAHK--------------------------------LFDELSDRD 231
           VL   A        ++AH                                 +FD +  ++
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
            VSWN MI GY  NG + + L +F  M+  G +V   +++  L  C   G L  G  VH 
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
             ++      +S  N L+ MYSKC  +D A  VF+++  R+ VSW +MI G A+ G  + 
Sbjct: 287 LLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSED 346

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           A+RLF  M  E ++PD + + S++ A A        + +H Y     +   +YV  AL+D
Sbjct: 347 AVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALID 406

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVT 460
           MYAKCG +  A  +FN    + +++WN MI           A++LF  M      P+  T
Sbjct: 407 MYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETT 466

Query: 461 MACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
              +L AC+    ++ GRE    +   +G+         +VD+  + G L  A +    +
Sbjct: 467 FLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKM 526

Query: 520 P 520
           P
Sbjct: 527 P 527



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 168/332 (50%), Gaps = 12/332 (3%)

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            L  F  M + G    L T  ++L  CA  G L  GRAVHA         E      L +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL-FRGMVREGIEPDVY 369
           MY+KC     A RVF++M  R  V+W +++AGYAR G+   A+ +  R    EG  PD  
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            + S+L ACA    L   ++ H +   + ++  + V+ A++D Y KCG +  A  VF+ M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGR 478
           P K+ VSWN MI           AL LF  M++   +   V++   L AC  L  L+ G 
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
            +H  ++R G+ ++ +V NA++ MY KC  + LA  +FD +  +  +SW  MI G   +G
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
              DA+  F  M+   ++PD  + +SV+ A +
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALA 374



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 154/299 (51%), Gaps = 14/299 (4%)

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A+  F  M   G  P +   TS+L  CA  G L  G+ VH  +    + S    + AL 
Sbjct: 42  AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN--FEPDG 458
           +MYAKC   ADA  VF++MPV+D V+WN ++           A+++ V M +     PD 
Sbjct: 102 NMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           +T+  +LPACA+  AL   RE H + +R G+    NVA AI+D Y KCG +  AR +FD 
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +P K+ +SW  MI GY  +G   +A+A FN M + G++  +VS ++ L AC   G +DEG
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
            R   ++     ++  +     ++ + S+   +  A    + +      + W +++ GC
Sbjct: 282 MRVHELL-VRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS-WNAMILGC 338



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 196/419 (46%), Gaps = 40/419 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +NA +  +   G    AME+   +   E  + D+ T  S+L  CA+ ++L   ++ H+  
Sbjct: 128 WNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFA 187

Query: 123 CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             SG+  ++ V + + ++  +  CGD++  R VF+ +       WN ++  Y++ G+ +E
Sbjct: 188 IRSGL--EELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSRE 245

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVG----------------------------- 212
           +L LF +M   G+     +    L+    +G                             
Sbjct: 246 ALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALIT 305

Query: 213 ---NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                +RV  A  +FDEL  R  VSWN MI G   NG +E  + +F  M       D  T
Sbjct: 306 MYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFT 365

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V+V+   A+    +  R +H ++++    +++     L+DMY+KCG ++ A  +F    
Sbjct: 366 LVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSAR 425

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ER V++W +MI GY   G    A+ LF  M   GI P+     S+L AC+  GL++ G++
Sbjct: 426 ERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE 485

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALDL 446
               +KE+  ++  +     ++D+  + G + +A +   +MP+   +S +  M+GA  L
Sbjct: 486 YFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKL 544


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 278/792 (35%), Positives = 440/792 (55%), Gaps = 48/792 (6%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L S  + + D  T+  +++ C     +  GK VH +  + G+++D  V G+ ++ ++  C
Sbjct: 200 LISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFV-GNAMIALYGKC 258

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYTFSC 203
           G L E   +F+K+    +  WN L+  +S+ G + E+   F+ +     G+  D  T   
Sbjct: 259 GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVT 318

Query: 204 VLKCLAVVGNSRR--------------------------------VKDAHKLFDELSDRD 231
           +L   +  GN                                   + +A  LF ++ ++ 
Sbjct: 319 LLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKS 378

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           VVSWN MI  Y   G   +  ++ ++M        V+  T++ +L  C     L+  RA+
Sbjct: 379 VVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRAL 438

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H ++L+  F  +   NN  +  Y+KCG L  A  VF  M  +SV SW ++I G+A+ G  
Sbjct: 439 HGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDP 498

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             A+  +  M R GI PD ++I S+L AC   GLL+ GK++H ++  N ++ + +V+ +L
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSL 558

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDG 458
           + +Y  C       + F +M  K+ V WN M+           AL LF  ML +  EPD 
Sbjct: 559 LSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDE 618

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           + +A IL AC+ L+AL  G+E+H + L++ +  D  VA +++DMY K G L  ++ +F+ 
Sbjct: 619 IAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNR 678

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +  K++ SW +MI G+G+HG G  A+  F DM+++  +PD  +F+ VL AC H+GLV EG
Sbjct: 679 LNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEG 738

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
             +   M+    +EP+LEHYAC++D+L R G L+EA  FI  MP  PDA IW SLL    
Sbjct: 739 LNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSI 798

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
            + ++++ EK AE +  LE +    Y+LL+N+YA A KW+ V+ +R+K+    L+K+ GC
Sbjct: 799 TYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGC 858

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           SWIE++GKV  F+AG +S+P + +I  +  RL  ++   GY P     L   +E+EK   
Sbjct: 859 SWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKI 918

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
           L GHSEK+A+ FG LN   G T+R++KNLR+C DCH  AK++SK A+REIV+RD+ RFHH
Sbjct: 919 LKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHH 978

Query: 819 FKDGRCSCRGFW 830
           FK G CSC  +W
Sbjct: 979 FKKGICSCGDYW 990



 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 195/680 (28%), Positives = 332/680 (48%), Gaps = 68/680 (10%)

Query: 27  ASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVL 86
           ++ K S   +   ++SH S ++NP+S     +L+        EI + CE G+L  A++ L
Sbjct: 42  STPKSSYFFVSARTQSHQSRSVNPVS---QLSLL-------EEISKLCEAGDLNGALDFL 91

Query: 87  YSSEKSKID------TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF 140
             + K+          +    +LQ C   K++E G+K+  ++C S     D VL ++L+ 
Sbjct: 92  QRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLIT 151

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSY 199
           M+  CG   E R VF+++ N  +F WN L+  Y +   + E+++ F ++ S+     D++
Sbjct: 152 MYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNF 211

Query: 200 TFSCVLKC--------------------------------LAVVGNSRRVKDAHKLFDEL 227
           TF C++K                                 +A+ G    + +A +LFD++
Sbjct: 212 TFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKM 271

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMF 285
            +++++SWN +I G+  NG   +    F+ +L  G  +  D+ATMVT+L  C+  G +  
Sbjct: 272 PEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDV 331

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G  +H  A+K     E+   N L+DMYSKCG L  A  +F K+  +SVVSW SMI  Y+R
Sbjct: 332 GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR 391

Query: 346 EGVFDGAIRLFRG--MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
           EG       L R   M  E +E +   I ++L AC  +  L   + +H Y   +  Q   
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ- 452
            ++NA +  YAKCGS+  AE VF  M  K + SWN +IG          ALD +  M + 
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
              PD  ++  +L AC  L  L+ G+EIHG++LR+G+  +  VA +++ +Y  C      
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           R+ F+ +  K+ + W  M++GY  +    +A++ F  M   G+EPDE++  S+L ACS  
Sbjct: 572 RTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYAC-MVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
             +  G            +E      AC ++D+ +++G L  + R    +    +   W 
Sbjct: 632 SALGLGKEVHCFALKNSLMEDNF--VACSLMDMYAKSGFLGHSQRIFNRLN-GKEVASWN 688

Query: 632 SLLCGCRIHHEVKLAEKVAE 651
            ++ G  +H +   A ++ E
Sbjct: 689 VMITGFGVHGQGNKAVELFE 708


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 258/650 (39%), Positives = 385/650 (59%), Gaps = 14/650 (2%)

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
            G+  D+Y  + +L+C     ++   +    LF ++   ++  WN MI G ++N   +  
Sbjct: 40  FGLCHDNYLLNMILRCSFDFSDTNYTR---FLFHQIKQPNIFLWNTMIRGLVSNDCFDDA 96

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           +E +  M + GF  +  T   VL  CA    L  G  +H   +K  F  ++    +L+ +
Sbjct: 97  IEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCL 156

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+KCG L+ A +VF+ + +++VVSWT++I+GY   G F  AI +FR ++   + PD + I
Sbjct: 157 YAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTI 216

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
             +L AC   G L  G+ +H  I E  M  +++V  +L+DMYAKCG+M  A SVF+ MP 
Sbjct: 217 VRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPE 276

Query: 432 KDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREI 480
           KDIVSW  MI           A+DLF+ M  +N +PD  T+  +L ACA L ALE G  +
Sbjct: 277 KDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWV 336

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
            G + R+    +  +  A++D+Y KCG +  A  +F  +  KD + W  +I+G  M+G+ 
Sbjct: 337 SGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYV 396

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
             +   F  + + GI+PD  +FI +L  C+H+GLVDEG R+FN M    ++ P +EHY C
Sbjct: 397 KISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGC 456

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           MVDLL R G L EA++ I  MP+  +A +WG+LL  CRIH + +LAE   + + ELEP N
Sbjct: 457 MVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWN 516

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
           +G YVLL+N+Y+   KW+E  K+R  ++ + ++K PGCSWIE+ G V+ F+ G   HP +
Sbjct: 517 SGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLS 576

Query: 721 KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
           +KI + L  L  +MK  GY P T + L + +E EKE  L  HSEKLA+AFG+++      
Sbjct: 577 EKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAV 636

Query: 781 IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           IRV KNLRVCGDCH   K +S    REI +RD+NRFH F++G CSC  +W
Sbjct: 637 IRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 211/436 (48%), Gaps = 45/436 (10%)

Query: 147 DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
           D    R +F++I    +F+WN ++        F +++  +  M+S G   +++TF  VLK
Sbjct: 61  DTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLK 120

Query: 207 CLA--------------------------------VVGNSRRVKDAHKLFDELSDRDVVS 234
             A                                +      ++DAHK+FD++ D++VVS
Sbjct: 121 ACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVS 180

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           W  +ISGYI  G   + +++F+ +L +    D  T+V VLS C   G L  G  +H   +
Sbjct: 181 WTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIM 240

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           +    + +    +L+DMY+KCG+++ A  VF+ M E+ +VSW +MI GYA  G+   AI 
Sbjct: 241 EMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAID 300

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LF  M RE ++PD Y +  +L ACA  G LE+G+ V   +  N+   +  +  AL+D+YA
Sbjct: 301 LFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYA 360

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNF-----------EPDGVTMAC 463
           KCGSM+ A  VF  M  KD V WN +I  L +   +  +F           +PDG T   
Sbjct: 361 KCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIG 420

Query: 464 ILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
           +L  C     ++ GR     + R   ++        +VD+  + G+L  A  L   +P +
Sbjct: 421 LLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPME 480

Query: 523 -DLISWTIMIAGYGMH 537
            + I W  ++    +H
Sbjct: 481 ANAIVWGALLGACRIH 496



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 189/392 (48%), Gaps = 35/392 (8%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L  SE    +  T+  +L+ CA L  L+ G K+H+++ + G   D  V  + LV ++  C
Sbjct: 102 LMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFV-KTSLVCLYAKC 160

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G L++  +VF+ I +  V  W  ++  Y   G F+E++ +F+++  + +A DS+T   VL
Sbjct: 161 GYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVL 220

Query: 206 ----------------KCLAVVGNSRRV----------------KDAHKLFDELSDRDVV 233
                           KC+  +G  R V                + A  +FD + ++D+V
Sbjct: 221 SACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIV 280

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           SW  MI GY  NG+ ++ +++F +M       D  T+V VLS CA  GAL  G  V    
Sbjct: 281 SWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLV 340

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
            +  F         L+D+Y+KCG +  A  VF+ M E+  V W ++I+G A  G    + 
Sbjct: 341 DRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISF 400

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDM 412
            LF  + + GI+PD      +L  C   GL++ G+   + + +   +  S+     ++D+
Sbjct: 401 GLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDL 460

Query: 413 YAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
             + G + +A  +   MP++ + + W  ++GA
Sbjct: 461 LGRAGLLDEAHQLIRNMPMEANAIVWGALLGA 492



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 135/314 (42%), Gaps = 37/314 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  +  VG   +A+++     +  +  D+ T   +L  C  L  L  G+ +H  I
Sbjct: 180 SWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCI 239

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            E G+V  +  +G+ LV M+  CG++++ R VF+ +    +  W  ++  Y+  G  KE+
Sbjct: 240 MEMGMV-RNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEA 298

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG------------------------------ 212
           + LF +MQ   +  D YT   VL   A +G                              
Sbjct: 299 IDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDL 358

Query: 213 --NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 +  A ++F  + ++D V WN +ISG   NG  +    +F ++  LG   D  T 
Sbjct: 359 YAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTF 418

Query: 271 VTVLSGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           + +L GC + G +  GR   ++       +  I     ++D+  + G LD A ++   M 
Sbjct: 419 IGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMP 478

Query: 330 -ERSVVSWTSMIAG 342
            E + + W +++  
Sbjct: 479 MEANAIVWGALLGA 492


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 278/792 (35%), Positives = 439/792 (55%), Gaps = 48/792 (6%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L S  + + D  T+  +++ C     +  GK VH +  + G+++D  V G+ ++ ++  C
Sbjct: 200 LISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFV-GNAMIALYGKC 258

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYTFSC 203
           G L E   +F+K+    +  WN L+  +S+ G + E+   F+ +     G+  D  T   
Sbjct: 259 GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVT 318

Query: 204 VLKCLAVVGNSRR--------------------------------VKDAHKLFDELSDRD 231
           +L   +  GN                                   + +A  LF ++ ++ 
Sbjct: 319 LLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKS 378

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           VVSWN MI  Y   G   +  ++ ++M        V+  T++ +L  C     L+  RA+
Sbjct: 379 VVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRAL 438

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H ++L+  F  +   NN  +  Y+KCG L  A  VF  M  +SV SW ++I G+A+ G  
Sbjct: 439 HGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDP 498

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             A+  +  M R GI PD ++I S+L AC   GLL+ GK++H ++  N ++ + +V+ +L
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSL 558

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDG 458
           + +Y  C       + F  M  K+ V WN M+           AL LF  ML +  EPD 
Sbjct: 559 LSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDE 618

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           + +A IL AC+ L+AL  G+E+H + L++ +  D  VA +++DMY K G L  ++ +F+ 
Sbjct: 619 IAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNR 678

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +  K++ SW +MI G+G+HG G  A+  F DM+++  +PD  +F+ VL AC H+GLV EG
Sbjct: 679 LNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEG 738

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
             +   M+    +EP+LEHYAC++D+L R G L+EA  FI  MP  PDA IW SLL    
Sbjct: 739 LNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSI 798

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
            + ++++ EK AE +  LE +    Y+LL+N+YA A KW+ V+ +R+K+    L+K+ GC
Sbjct: 799 TYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGC 858

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           SWIE++GKV  F+AG +S+P + +I  +  RL  ++   GY P     L   +E+EK   
Sbjct: 859 SWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKI 918

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
           L GHSEK+A+ FG LN   G T+R++KNLR+C DCH  AK++SK A+REIV+RD+ RFHH
Sbjct: 919 LKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHH 978

Query: 819 FKDGRCSCRGFW 830
           FK G CSC  +W
Sbjct: 979 FKKGICSCGDYW 990



 Score =  292 bits (747), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 195/680 (28%), Positives = 332/680 (48%), Gaps = 68/680 (10%)

Query: 27  ASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVL 86
           ++ K S   +   ++SH S ++NP+S     +L+        EI + CE G+L  A++ L
Sbjct: 42  STPKSSYFFVSARTQSHQSRSVNPVS---QLSLL-------EEISKLCEAGDLNGALDFL 91

Query: 87  YSSEKSKID------TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF 140
             + K+          +    +LQ C   K++E G+K+  ++C S     D VL ++L+ 
Sbjct: 92  QRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLIT 151

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSY 199
           M+  CG   E R VF+++ N  +F WN L+  Y +   + E+++ F ++ S+     D++
Sbjct: 152 MYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNF 211

Query: 200 TFSCVLKC--------------------------------LAVVGNSRRVKDAHKLFDEL 227
           TF C++K                                 +A+ G    + +A +LFD++
Sbjct: 212 TFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKM 271

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMF 285
            +++++SWN +I G+  NG   +    F+ +L  G  +  D+ATMVT+L  C+  G +  
Sbjct: 272 PEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDV 331

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G  +H  A+K     E+   N L+DMYSKCG L  A  +F K+  +SVVSW SMI  Y+R
Sbjct: 332 GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR 391

Query: 346 EGVFDGAIRLFRG--MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
           EG       L R   M  E +E +   I ++L AC  +  L   + +H Y   +  Q   
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ- 452
            ++NA +  YAKCGS+  AE VF  M  K + SWN +IG          ALD +  M + 
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
              PD  ++  +L AC  L  L+ G+EIHG++LR+G+  +  VA +++ +Y  C      
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           R+ F+ +  K+ + W  M++GY  +    +A++ F  M   G+EPDE++  S+L ACS  
Sbjct: 572 RTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYAC-MVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
             +  G            +E      AC ++D+ +++G L  + R    +    +   W 
Sbjct: 632 SALGLGKEVHCFALKNSLMEDNF--VACSLMDMYAKSGFLGHSQRIFNRLN-GKEVASWN 688

Query: 632 SLLCGCRIHHEVKLAEKVAE 651
            ++ G  +H +   A ++ E
Sbjct: 689 VMITGFGVHGQGNKAVELFE 708


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 274/775 (35%), Positives = 429/775 (55%), Gaps = 51/775 (6%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y   L+ C DL+S+   +++H  I  SG    +  LG+++V  +  CG +   R  F+ I
Sbjct: 30  YRDALRQCQDLESV---RQIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARVAFDAI 84

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYTFSCV------------ 204
                + W  ++  Y++ G+++ +L L+K+M  Q   +   +   +C             
Sbjct: 85  ARKNDYSWGSMLTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLGACASIEALEEGKAIH 144

Query: 205 --------LKCLAVVGNSR--------RVKDAHKLFDELSDR-DVVSWNCMISGYIANGV 247
                   LK   ++ NS          ++DA +LF+ +S R  V SWN MI+ Y  +G 
Sbjct: 145 SRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGH 204

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
            E+ + ++++M        + T  +VLS C+N G L  GR +HA         ++S  N 
Sbjct: 205 FEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNA 261

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           LL MY++C  LD A ++F+++  R VVSW++MIA +A   +FD AI  +  M  EG+ P+
Sbjct: 262 LLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPN 321

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
            Y   S+L ACA  G L  G+ VHD I  N  + +L    AL+D+Y   GS+ +A S+F+
Sbjct: 322 YYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFD 381

Query: 428 QMPVKDIVSWNTMIGA----------LDLFVAM--LQNFEPDGVTMACILPACASLAALE 475
           Q+  +D   W  +IG           L+L+  M          +  +C++ ACASL A  
Sbjct: 382 QIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFA 441

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
             R+ H  I   G+ +D  +A ++V+MY + G L  AR +FD + ++D ++WT +IAGY 
Sbjct: 442 DARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYA 501

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
            HG    A+  + +M   G EP E++F+ VLYACSH+GL ++G + F  ++ +  + P +
Sbjct: 502 KHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNI 561

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
            HY+C++DLLSR G LS+A   I  MPV P+   W SLL   RIH +VK A   A  + +
Sbjct: 562 AHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITK 621

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           L+P +   YVLL+NV+A       +  +R  +  RG+KK  G SWIE+  +++ F  G +
Sbjct: 622 LDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDN 681

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
           SHP  ++I + L+RL  ++K  GY P++   L +  E EKE+ L  HSEKLA+AFG++  
Sbjct: 682 SHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIAT 741

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             G T+R+   LR+C DCH   KF+S  ARREI++RDS+RFH F+DG+CSC  +W
Sbjct: 742 APGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 264/536 (49%), Gaps = 55/536 (10%)

Query: 52  SASISKTLVCKTKNYN--AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADL 109
           SA ++   + +  +Y+  + +  + + G+   A++ LY     + +   Y ++L  CA +
Sbjct: 76  SARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALD-LYKRMDLQPNPVVYTTVLGACASI 134

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK-VFIWNL 168
           ++LE+GK +HS I  +  +  D +L + L+ M+  CG L++ +R+F ++   + V  WN 
Sbjct: 135 EALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNA 194

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRRV-------- 217
           ++  Y+++G+F+E++ L++ M    +     TF+ VL     L ++   R++        
Sbjct: 195 MIAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRG 251

Query: 218 ---------------------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
                                 DA K+F  L  RDVVSW+ MI+ +    + ++ +E + 
Sbjct: 252 TELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYS 311

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
           +M   G   +  T  +VL  CA+ G L  GRAVH   L   +   +     L+D+Y+  G
Sbjct: 312 KMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYG 371

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS-IL 375
            LD A  +F+++  R    WT +I GY+++G   G + L+R M      P    I S ++
Sbjct: 372 SLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVI 431

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            ACA  G     +  H  I+ + M S   ++ +L++MY++ G++  A  VF++M  +D +
Sbjct: 432 SACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTL 491

Query: 436 SWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYI 484
           +W T+I           AL L+  M L+  EP  +T   +L AC+     E+G+++   I
Sbjct: 492 AWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISI 551

Query: 485 LRHGISADRNVAN--AIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
            +   +   N+A+   I+D+  + G L  A  L + +P + + ++W+ ++    +H
Sbjct: 552 -QSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIH 606


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 283/814 (34%), Positives = 423/814 (51%), Gaps = 120/814 (14%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF---MFVTCGDLKEGRRVF 155
           Y  +LQLC    +   G+ +H+   ++G+++   +  + L +   + V+ G  +E R +F
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271

Query: 156 NKIDNGK--VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           + I   +   F WN L+  Y+K+G                                    
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSG------------------------------------ 295

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
             R+ DAH +F E+ DRD VSW  MI G   +G     ++ F +M++ GF     T+  V
Sbjct: 296 --RLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNV 353

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG---- 329
           LS CA   A   GR VH F +K   S  +   N++L MY KCGD + A  VFE+M     
Sbjct: 354 LSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSV 413

Query: 330 ---------------------------ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR- 361
                                      ERS+VSW ++IAGY + G+   A++ F  M+  
Sbjct: 414 SSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSA 473

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
             +EPD + +TS+L ACA   +L++GK +H YI    M  S  + NAL+  YAK GS+  
Sbjct: 474 SSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVET 533

Query: 422 AESVFNQMPV---------------------------------KDIVSWNTMI------- 441
           A  + +Q  V                                 +D+++W  MI       
Sbjct: 534 ARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNG 593

Query: 442 ---GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
               A++LF +M L   EP+  T+A +L ACASLA L+ G++IH   +R       +V+N
Sbjct: 594 QNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSN 653

Query: 498 AIVDMYVKCGVLVLARSLFDMI-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           AI+ +Y + G + LAR +FD I   K+ I+WT MI     HG G  A+  F +M + G++
Sbjct: 654 AIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVK 713

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           PD ++++ VL AC+H+G VD+G R++  M+ E  I P++ HYACMVDL +R G L+EA+ 
Sbjct: 714 PDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHE 773

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
           FI+ MPVAPD  +WGSLL  CR+     LAE  A  +  ++P N+G Y  LANVY+   +
Sbjct: 774 FIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGR 833

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           W +  ++ +    +G+KK  G SW  ++GKV++F A    HP    I      +  E+K+
Sbjct: 834 WNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKK 893

Query: 737 EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
            G+ P     L + D+  KE  L  HSEKLA+AFG+++ P   T+R+ KNLRVC DCH  
Sbjct: 894 AGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTA 953

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KF+SK   REI++RD+ RFHHF+DG CSC+ +W
Sbjct: 954 IKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 226/485 (46%), Gaps = 89/485 (18%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  ++L  CA +++   G+KVH  + + G+     V  S L +M+  CGD +  R VF +
Sbjct: 349 TLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVL-YMYGKCGDAETARAVFER 407

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +    V  WN+++  Y+  G                                      R+
Sbjct: 408 MQVRSVSSWNVMVSLYTHQG--------------------------------------RM 429

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSG 276
           + A  +F+ + +R +VSWN +I+GY  NG+    L+ F  ML+      D  T+ +VLS 
Sbjct: 430 ELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSA 489

Query: 277 CANCGALMFGRAVHAF--------------ALKACFSKE--------------------I 302
           CAN   L  G+ +H++              AL + ++K                     I
Sbjct: 490 CANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVI 549

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
           SF   LL+ Y K GD   A  +F+ M  R V++WT+MI GY + G  D A+ LFR M+  
Sbjct: 550 SF-TALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILI 608

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G EP+ + + ++L ACA    L+ GK +H     +  + S+ VSNA++ +YA+ GS+  A
Sbjct: 609 GPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLA 668

Query: 423 ESVFNQM-PVKDIVSWNTMIGALD----------LFVAMLQ-NFEPDGVTMACILPACAS 470
             VF+Q+   K+ ++W +MI A+           LF  M++   +PD +T   +L ACA 
Sbjct: 669 RRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAH 728

Query: 471 LAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWT 528
              +++G+  +  +   HGI    +    +VD++ + G+L  A      +P A D + W 
Sbjct: 729 AGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWG 788

Query: 529 IMIAG 533
            ++A 
Sbjct: 789 SLLAA 793



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 171/439 (38%), Gaps = 114/439 (25%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI------------------ 127
           + S+   + D  T  S+L  CA+L+ L+ GK++HS I  +G+                  
Sbjct: 470 MLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSG 529

Query: 128 -------VIDDGVLG-------SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
                  ++D  V+        + L+  +V  GD K+ R +F+ ++N  V  W  ++  Y
Sbjct: 530 SVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGY 589

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------ 209
            + G   E++ LF+ M  +G   +S+T + VL   A                        
Sbjct: 590 HQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSV 649

Query: 210 --------VVGNSRRVKDAHKLFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
                   V   S  V  A ++FD++  R + ++W  MI     +G+ E+ + +F+EM+ 
Sbjct: 650 SVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVR 709

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
           +G   D  T V VLS CA+ G                                    +D 
Sbjct: 710 VGVKPDHITYVGVLSACAHAGF-----------------------------------VDK 734

Query: 321 AIRVFEKM-GERSVVSWTS----MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
             R +E+M  E  +V   S    M+  +AR G+   A    +   R  + PD     S+L
Sbjct: 735 GKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQ---RMPVAPDTVVWGSLL 791

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI- 434
            AC      ++ +     +   D  +S   S AL ++Y+ CG   DA  ++     K + 
Sbjct: 792 AACRVRKNADLAELAAGKLLSIDPHNSGAYS-ALANVYSACGRWNDAARIWKLRKDKGVK 850

Query: 435 ----VSWNTMIGALDLFVA 449
                SW  + G + +F A
Sbjct: 851 KETGFSWTHVRGKVHVFGA 869


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 274/792 (34%), Positives = 440/792 (55%), Gaps = 50/792 (6%)

Query: 84  EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFV 143
           E++Y  ++++I    + S+L+ C+    L  G KVH  + + G    D V+ + L+ M+ 
Sbjct: 89  EMVYQ-DQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFE-SDAVVETSLLCMYG 146

Query: 144 TCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
               L +  + F+ +    V  W+ ++  + + G   E L +F +M S  +  DS T   
Sbjct: 147 EMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLS 206

Query: 204 VLKCLAVVGNSRRVKDAH--------------------------------KLFDELSDRD 231
           V +  + +G+ R  +  H                                +LF+ +  R 
Sbjct: 207 VTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRM 266

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
              W  MIS Y  +G  ++ L VF +M       +  TMV VL  CA  G +  GR+VH 
Sbjct: 267 TAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHG 326

Query: 292 FALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
           F ++     E+ F    L+++Y+  G+L    +VFE + E++++SW ++I+ + R G  +
Sbjct: 327 FVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPE 386

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNAL 409
            A+ LF  M  +G+ PD Y++ S L AC      ++G  +H YI K  +     +V NAL
Sbjct: 387 EALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND--FVQNAL 444

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDG 458
           +DMYAKCG +  A  +F ++  K +V+WN+MI           A+ LF  M  N  + D 
Sbjct: 445 IDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDK 504

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           +T   ++ AC+ L  LE+G+ +H  ++ +G+  D  +  A+ DMY KCG L +A  +FD 
Sbjct: 505 LTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDR 564

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +  + ++SW++MIAGYGMHG     I+ FN M  +GI+P++++F+ +L ACSH+G V+EG
Sbjct: 565 MSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEG 624

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
             +FN M  E  +EPK +H+ACMVDLLSR G+L+ AY+ I  +P   +++IWG+LL GCR
Sbjct: 625 KLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCR 683

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
           IH  + + + + +++ +++  +TGYY LL+N+YAE   W++  K+R  +  +GL+K PG 
Sbjct: 684 IHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGY 743

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           S IEI  K+  F  G +SH   K I   L+  R  +  + Y  +   +++   +  KE  
Sbjct: 744 STIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENN 803

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
           +  HSEKLA+AFGI+N   G T+R++KNLRVC DCH  AK  SK   REI++RD NRFH 
Sbjct: 804 VVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHC 863

Query: 819 FKDGRCSCRGFW 830
           F++G CSC  +W
Sbjct: 864 FRNGSCSCNDYW 875



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 212/433 (48%), Gaps = 18/433 (4%)

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV--TVLS 275
           + + ++FD     D   W  +I  Y+  G  E+ + ++ EM+       ++  V  +VL 
Sbjct: 50  ESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQD-QTQISNFVFPSVLK 108

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C+  G L  G  VH   +K  F  +     +LL MY +   LD A + F+ M  R VV+
Sbjct: 109 ACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVA 168

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W+S++  + + G     + +F  M+ E +EPD   + S+  AC+  G L +G+ VH Y+ 
Sbjct: 169 WSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVV 228

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
             +++S+  ++N+L+ MY K G +  AE +F  +P +    W  MI           AL+
Sbjct: 229 RREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALN 288

Query: 446 LFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN-VANAIVDMY 503
           +F  M +   EP+ VTM  +L ACA L  ++ GR +HG+++R  +  + + +  A++++Y
Sbjct: 289 VFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELY 348

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
              G L     +F+ I  K ++SW  +I+ +  +G   +A+  F  M+  G+ PD  S  
Sbjct: 349 ADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLA 408

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           S L AC        G +    +    N    +++   ++D+ ++ G +  A +  E +  
Sbjct: 409 SSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKMFEKIKE 466

Query: 624 APDATIWGSLLCG 636
               T W S++CG
Sbjct: 467 KSLVT-WNSMICG 478



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 187/361 (51%), Gaps = 19/361 (5%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +HA        +    +  L++ Y++ G  + + RVF+   +     W  +I  Y   G 
Sbjct: 20  LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGF 79

Query: 349 FDGAIRLFRGMV-REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
           F+ A+ L+  MV ++  +   +   S+L AC+  G L +G  VH  + +   +S   V  
Sbjct: 80  FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVET 139

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEP 456
           +L+ MY +   + DA   F+ MP++D+V+W++++            LD+F  M+ +  EP
Sbjct: 140 SLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEP 199

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           D VTM  +  AC+ L +L  GR +HGY++R  I ++ ++ N+++ MY K G L  A  LF
Sbjct: 200 DSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLF 259

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           + +P +    WT MI+ Y   G   +A+  F  M++  +EP++V+ + VL AC+  G V 
Sbjct: 260 ENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVK 319

Query: 577 EGWRFFNMMRYECNIEPKLEHYA-CMVDLLSRTGNLSEAYRFIEMMPVAPDATI--WGSL 633
           EG R  +       ++P+L+     +++L + TGNL + ++  E +    + TI  W +L
Sbjct: 320 EG-RSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETI---KEKTILSWNTL 375

Query: 634 L 634
           +
Sbjct: 376 I 376



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 119/271 (43%), Gaps = 20/271 (7%)

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML--QN 453
           S  L++ YA+ G    ++ VF+  P  D   W  +I           A+ L+  M+    
Sbjct: 36  STKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQ 95

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
            +        +L AC+    L  G ++HG +++ G  +D  V  +++ MY +   L  A 
Sbjct: 96  TQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDAC 155

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
             FD +P +D+++W+ ++  +  +G   + +  F+ M    +EPD V+ +SV  ACS  G
Sbjct: 156 KAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELG 215

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
            +  G R  +       IE        ++ +  + G+L  A R  E +P    A     +
Sbjct: 216 SLRLG-RSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMI 274

Query: 634 LC----GCRIHHEVKLAEKVAEHVFELEPDN 660
            C    GC     + +  K+ E  F++EP+ 
Sbjct: 275 SCYNQSGC-FQEALNVFAKMQE--FKMEPNQ 302



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 6/168 (3%)

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           CA+   L    ++H ++   G+      +  +++ Y + G+   ++ +FD  P  D   W
Sbjct: 11  CATSTTLT---QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMW 67

Query: 528 TIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
            ++I  Y   GF  +A++ +++M  Q   +     F SVL ACS  G +  G +    + 
Sbjct: 68  GVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRV- 126

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
            +C  E        ++ +      L +A +  + MP+  D   W S++
Sbjct: 127 IKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIR-DVVAWSSIV 173


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/729 (36%), Positives = 423/729 (58%), Gaps = 49/729 (6%)

Query: 123 CESGIVIDDG------VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
           CES + + +G      V  + ++  +++       R+VF K+ +  +  WN+++  Y K 
Sbjct: 76  CESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKN 135

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWN 236
           GN   +  LF +M       D  +++ +L   A  G    V++A K+FD++  ++ +SWN
Sbjct: 136 GNLSAARALFNQMPE----KDVVSWNAMLSGFAQNG---FVEEARKIFDQMLVKNEISWN 188

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            ++S Y+ NG  E    +F   ++     ++ +   ++ G      L   R++     + 
Sbjct: 189 GLLSAYVQNGRIEDARRLFDSKMDW----EIVSWNCLMGGYVRKKRLDDARSLFD---RM 241

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
               +IS+N  ++  Y++ G L  A R+FE++  R V +WT+M++G+ + G+ D A R+F
Sbjct: 242 PVRDKISWN-IMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIF 300

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M     E +  +  +++        +E  +++ D +   +  S     N ++  YA+C
Sbjct: 301 EEMP----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSW----NTMVTGYAQC 352

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEPDG-----VTM 461
           G++  A+ +F++MP +D +SW  MI           AL LF+ M    + DG       +
Sbjct: 353 GNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKM----KRDGGILNRSAL 408

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
           AC L +CA +AALE G+++HG +++ G        NA++ MY KCG +  A  +F+ I  
Sbjct: 409 ACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE 468

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           KD++SW  MIAGY  HGFG +A+A F  M+   I+PD+V+ + VL ACSH+G VD+G  +
Sbjct: 469 KDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEY 527

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           FN M     I    +HY CM+DLL R G L EA   ++ MP  PDA  WG+LL   RIH 
Sbjct: 528 FNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHG 587

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
           + +L EK AE VFE+EPDN+G YVLL+N+YA + +W EV+++R K+  +G+KK PG SW+
Sbjct: 588 DTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWV 647

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCG 761
           EI+ K +IF  G  SHP A++I + L+ L LE+K++G+   T+  L + +E EKE  L  
Sbjct: 648 EIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKY 707

Query: 762 HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKD 821
           HSEKLA+AFGIL++P G+ IRV KNLRVC DCH   K +SK  +R+I++RDSNRFHHF +
Sbjct: 708 HSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSE 767

Query: 822 GRCSCRGFW 830
           G CSC  +W
Sbjct: 768 GSCSCGDYW 776



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 203/471 (43%), Gaps = 61/471 (12%)

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           D D+V WN  IS Y+  G  E  L VF  M          T   ++SG  +       R 
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRS----TVTYNAMISGYLSNNKFDCARK 112

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           V     +    +++   N +L  Y K G+L  A  +F +M E+ VVSW +M++G+A+ G 
Sbjct: 113 V----FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGF 168

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
            + A ++F  M+   ++ ++ +   +L A   +G +E  + + D    + M   +   N 
Sbjct: 169 VEEARKIFDQML---VKNEI-SWNGLLSAYVQNGRIEDARRLFD----SKMDWEIVSWNC 220

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL-------------------DLF-- 447
           LM  Y +   + DA S+F++MPV+D +SWN MI                      D+F  
Sbjct: 221 LMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAW 280

Query: 448 VAMLQNFEPDG-----------------VTMACILPACASLAALERGREIHGYILRHGIS 490
            AM+  F  +G                 V+   ++        +E+ RE+   +     S
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTS 340

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
           +     N +V  Y +CG +  A+ LFD +P +D ISW  MI+GY   G   +A+  F  M
Sbjct: 341 S----WNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKM 396

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
           ++ G   +  +    L +C+    ++ G +    +  +   +        ++ +  + G+
Sbjct: 397 KRDGGILNRSALACALSSCAEIAALELGKQLHGRL-VKAGFQTGYIAGNALLAMYGKCGS 455

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV-FELEPDN 660
           + EA+   E +    D   W +++ G   H   K A  + E +   ++PD+
Sbjct: 456 IEEAFDVFEDI-TEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDD 505



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 15/217 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSK--IDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G  E+A+ +    ++    ++       L  CA++ +LE GK++H  +
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRL 431

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G      + G+ L+ M+  CG ++E   VF  I    +  WN ++  Y++ G  KE+
Sbjct: 432 VKAGFQT-GYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWN-----C 237
           L LF+ M+ + I  D  T   VL   +  G    V    + F+ +     ++ N     C
Sbjct: 491 LALFESMK-MTIKPDDVTLVGVLSACSHTG---FVDKGMEYFNSMYQNYGITANAKHYTC 546

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           MI      G  ++ L + K M    F  D AT   +L
Sbjct: 547 MIDLLGRAGRLDEALNLMKSM---PFYPDAATWGALL 580


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/651 (39%), Positives = 376/651 (57%), Gaps = 43/651 (6%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           LF+ +   +   WN MI G   +      ++ +  ML  G   +  T   +L  CA  GA
Sbjct: 88  LFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL------------------------ 318
              G+ +H   LK     +   + +L++MY++ G+L                        
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207

Query: 319 -------DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
                  D A R+FE++  R  VSW +MIAGYA+ G F+ A+  F+ M R  + P+   +
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            ++L ACA  G LE+G  V  +I+++ + S+L + NAL+DMY+KCG +  A  +F  +  
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           KDI+SWN MIG          AL LF  M Q N EP+ VT   ILPACA L AL+ G+ I
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387

Query: 481 HGYILRHGIS-ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           H YI +  +   + ++  +++DMY KCG +  A+ +F  +  K L SW  MI+G  MHG 
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGH 447

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
              A+  F  MR  G EPD+++F+ VL ACSH+GLV+ G + F+ M  + +I PKL+HY 
Sbjct: 448 ANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYG 507

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           CM+DLL R G   EA   ++ M + PD  IWGSLL  CR+H  V+L E  A+H+FELEP+
Sbjct: 508 CMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPE 567

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           N G YVLL+N+YA A +W++V ++R K++ +G+KK PGCS IE+   V+ F+ G   H  
Sbjct: 568 NPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQ 627

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
           ++ I  +L  +   +++ G+ P T   L + DE  KE +L  HSEKLA+AFG+++     
Sbjct: 628 SQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPET 687

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           TIR+ KNLRVCG+CH   K +SK   REI+ RD NRFHHFKDG CSC  +W
Sbjct: 688 TIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 229/460 (49%), Gaps = 57/460 (12%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T+  +L+ CA + + ++GK++H  + + G+   D  + + L+ M+   G+L     V
Sbjct: 131 NSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLE-SDPFVHTSLINMYAQNGELGYAELV 189

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+K                                 SL    D+ +F+ ++    + G  
Sbjct: 190 FSK--------------------------------SSL---RDAVSFTALITGYTLRGC- 213

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             + DA +LF+E+  RD VSWN MI+GY  +G  E+ L  F+EM       + +TMVTVL
Sbjct: 214 --LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVL 271

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S CA  G+L  G  V ++         +   N L+DMYSKCGDLD A  +FE + E+ ++
Sbjct: 272 SACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDII 331

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW  MI GY+    +  A+ LFR M +  +EP+     SIL ACA  G L++GK +H YI
Sbjct: 332 SWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYI 391

Query: 395 KENDM---QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
            +  +    +SL+ S  L+DMYAKCG++  A+ VF  M  K + SWN MI          
Sbjct: 392 DKKFLGLTNTSLWTS--LIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHAN 449

Query: 443 -ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAI 499
            AL+LF  M  + FEPD +T   +L AC+    +E GR+    ++  + IS        +
Sbjct: 450 MALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCM 509

Query: 500 VDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
           +D+  + G+   A +L   +  K D   W  ++    +HG
Sbjct: 510 IDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 218/445 (48%), Gaps = 52/445 (11%)

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM--YSKCGDLDGAIRVFEKM 328
           +T+LS C +   L   + +H+  +K          + L++    S  G+L  A+ +FE +
Sbjct: 36  LTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESI 92

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            + +   W +MI G +      GAI  +  M+  G+EP+ Y    +L +CA  G  + GK
Sbjct: 93  EQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGK 152

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMA---------------------------- 420
            +H ++ +  ++S  +V  +L++MYA+ G +                             
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212

Query: 421 ---DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILP 466
              DA  +F ++PV+D VSWN MI           AL  F  M + N  P+  TM  +L 
Sbjct: 213 CLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLS 272

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
           ACA   +LE G  +  +I  HG+ ++  + NA++DMY KCG L  AR LF+ I  KD+IS
Sbjct: 273 ACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIIS 332

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           W +MI GY       +A+A F  M+Q+ +EP++V+F+S+L AC++ G +D G      + 
Sbjct: 333 WNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYID 392

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
            +         +  ++D+ ++ GN+  A + F  M P +  +  W +++ G  +H    +
Sbjct: 393 KKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGS--WNAMISGLAMHGHANM 450

Query: 646 AEKVAEHVFE--LEPDNTGYYVLLA 668
           A ++   + +   EPD+  +  +L+
Sbjct: 451 ALELFRQMRDEGFEPDDITFVGVLS 475



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 176/401 (43%), Gaps = 72/401 (17%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + + G  E+A+      +++ +  +  T  ++L  CA   SLE G  V S I
Sbjct: 231 SWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWI 290

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+   +  L + L+ M+  CGDL + R +F  I    +  WN+++  YS   ++KE+
Sbjct: 291 EDHGLG-SNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEA 349

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG--------------------NSR------- 215
           L LF+KMQ   +  +  TF  +L   A +G                    N+        
Sbjct: 350 LALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLID 409

Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                  ++ A ++F  +  + + SWN MISG   +G A   LE+F++M + GF  D  T
Sbjct: 410 MYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDIT 469

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V VLS C++ G +  GR         CFS  +              D D + +      
Sbjct: 470 FVGVLSACSHAGLVELGR--------QCFSSMVE-------------DYDISPK------ 502

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
              +  +  MI    R G+FD A  L + M    ++PD     S+L AC   G +E+G+ 
Sbjct: 503 ---LQHYGCMIDLLGRAGLFDEAEALMKNM---EMKPDGAIWGSLLGACRVHGNVELGEF 556

Query: 390 VHDYIKENDMQSS-LYVSNALMDMYAKCGSMADAESVFNQM 429
              ++ E + ++   YV   L ++YA  G   D   +  ++
Sbjct: 557 AAKHLFELEPENPGAYV--LLSNIYATAGRWDDVARIRTKL 595



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 127/279 (45%), Gaps = 20/279 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++N  IG +  + + ++A+ +    ++S ++    T+ SIL  CA L +L+ GK +H+ I
Sbjct: 332 SWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYI 391

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +  + + +  L + L+ M+  CG+++  ++VF  +    +  WN ++   +  G+   +
Sbjct: 392 DKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMA 451

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL-SDRDVVS----WNC 237
           L LF++M+  G   D  TF  VL   +  G    V+   + F  +  D D+      + C
Sbjct: 452 LELFRQMRDEGFEPDDITFVGVLSACSHAG---LVELGRQCFSSMVEDYDISPKLQHYGC 508

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MI      G+ ++   + K   N+    D A   ++L  C   G +  G     FA K  
Sbjct: 509 MIDLLGRAGLFDEAEALMK---NMEMKPDGAIWGSLLGACRVHGNVELGE----FAAKHL 561

Query: 298 FSKEISFNNT---LLDMYSKCGDLDGAIRVFEKMGERSV 333
           F  E         L ++Y+  G  D   R+  K+ ++ +
Sbjct: 562 FELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGM 600


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 305/887 (34%), Positives = 449/887 (50%), Gaps = 122/887 (13%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLY---SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +N+ +  +C     E+ + + +    +     D  T    L+ CA L+ LE GK +H   
Sbjct: 70  WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA 129

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIW---------------- 166
            ++  +  D  +GS LV ++  CG + E  +VF +       +W                
Sbjct: 130 KKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEA 189

Query: 167 --------------------NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC--- 203
                               N L++ Y+KTG  K +  LF KM    + + S   +C   
Sbjct: 190 LALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYAN 249

Query: 204 -------------------------VLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
                                    V+  L     SR +++  K+      +DVVSW  +
Sbjct: 250 NEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVAL 309

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           +SGY  NG+A K + VF+ ML+ G   D   +V +L+  +  G       +H + +++ F
Sbjct: 310 LSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGF 369

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG-------VFDG 351
           +  +    +L+++YSKCG L  A+++F+ M  R VV W+SMIA Y   G       +FD 
Sbjct: 370 NSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQ 429

Query: 352 AIRLFRGMV---REGIEPDV---YAITSILHACACDGLLE----------IGK------- 388
            I++ +G+    +  ++P V    AITS   A      ++          +G        
Sbjct: 430 MIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPT 489

Query: 389 ---DVHDYIKENDMQSSLYVSNALMD----MYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
                 D  K N     L   + ++     MY     +  A  VF  +P      WN MI
Sbjct: 490 YPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMI 549

Query: 442 ----------GALDLFVAMLQN-FEPDG-------VTMACILPACASLAALERGREIHGY 483
                      +L+L+  M++   +PD        V++  +L AC +L AL +G   H Y
Sbjct: 550 RGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSY 609

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
           +++ G   D  VA AI+DMY KCG L LAR LFD    KDL+ W+ MIA YG+HG G  A
Sbjct: 610 VIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKA 669

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           I  F+ M +AG+ P  V+F  VL ACSHSGL++EG  +F +M  E  I  KL +YACMVD
Sbjct: 670 IDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVD 729

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY 663
           LL R G LSEA   IE MPV PDA+IWGSLL  CRIH+ + LAEK+A+H+F L+P + GY
Sbjct: 730 LLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGY 789

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
           +VLL+N+YA   +W EV+K+R+ ++RRG  K  G S +E   +V+ F  G  SHP  +K+
Sbjct: 790 HVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKL 849

Query: 724 ESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRV 783
            + L+ L   MK  GY P T + L + +E  KE AL  HSE+LA+AFG++N   G T+R+
Sbjct: 850 YAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRI 909

Query: 784 TKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           TKNLR+CGDCH   K +SK   R I++RD +RFH F+DG CSC  +W
Sbjct: 910 TKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 154/660 (23%), Positives = 285/660 (43%), Gaps = 127/660 (19%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           + Q C + +S+    ++HS + ++GI + D    +KL  ++  C  L+  R+VF++  + 
Sbjct: 10  LFQACNNGRSVS---QLHSQVFKTGI-LHDTFFATKLNSLYAKCASLQAARKVFDETPHP 65

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSCVLKCLA----------- 209
            V +WN  +  Y +   ++E+L LF  M  + G A D++T    LK  A           
Sbjct: 66  NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125

Query: 210 --------------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
                          VG++         ++ +A K+F+E    D V W  M++GY  N  
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND 185

Query: 248 AEKGLEVFKEMLNLG-FNVDLATMVTVL-----SGCANCGALMFGR-----AVHAFALKA 296
            E+ L +F +M+ +  F+ DL  + ++L     +GC    A +F +      +    + A
Sbjct: 186 PEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIA 245

Query: 297 CFSKEISFNN------------------TLLDMYSKCG---DLDGAIRVFEKMGERSVVS 335
           C++   + N                   T++     C    +L+   ++ +    + VVS
Sbjct: 246 CYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVS 305

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W ++++GYA+ G+   ++ +FR M+ +GI+PD  A+  IL A +  G+ +    +H Y+ 
Sbjct: 306 WVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVV 365

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
            +   S+++V  +L+++Y+KCGS+ DA  +F  M V+D+V W++MI           AL+
Sbjct: 366 RSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALE 425

Query: 446 LFVAMLQ---------------NFEPDGVTMACILPAC-----------ASLAALERGRE 479
           +F  M+Q                 +P     +C L              A    L    E
Sbjct: 426 IFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWE 485

Query: 480 I------------HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           I               I  +G+  D  +      MYV    +  A  +F+ IP      W
Sbjct: 486 IFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLW 545

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPD-------EVSFISVLYACSHSGLVDEGWR 580
            +MI G+   G    ++  ++ M + G++PD        VS +SVL AC + G + +G  
Sbjct: 546 NVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKG-E 604

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           +F+    +   E  +     ++D+ S+ G+L  A R +       D   W +++    IH
Sbjct: 605 WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLA-RCLFDETAGKDLVCWSAMIASYGIH 663



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 158/315 (50%), Gaps = 34/315 (10%)

Query: 269 TMVTVLSGCANCGALMFGRAV---HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
            +V +   C N      GR+V   H+   K     +  F   L  +Y+KC  L  A +VF
Sbjct: 6   VLVDLFQACNN------GRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV-REGIEPDVYAITSILHACACDGLL 384
           ++    +V  W S +  Y RE  ++  +RLF  M+   G  PD + I   L ACA   +L
Sbjct: 60  DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119

Query: 385 EIGKDVHDYIKEND-MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
           E+GK +H + K+ND + S ++V +AL+++Y+KCG M +A  VF +    D V W +M+  
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTG 179

Query: 444 LDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
                   QN +P+            +LA   +       ++      D  + N+++++Y
Sbjct: 180 YQ------QNNDPE-----------EALALFSQ------MVMMDCFDGDLPLVNSLLNLY 216

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            K G   +A +LF  +P KD+ISW+ MIA Y  +    +A+  F++M +   EP+ V+ +
Sbjct: 217 AKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVV 276

Query: 564 SVLYACSHSGLVDEG 578
           S L AC+ S  ++EG
Sbjct: 277 SALQACAVSRNLEEG 291


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 274/767 (35%), Positives = 432/767 (56%), Gaps = 56/767 (7%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI-WNLLM 170
           L  G+ +H  +    ++  D V+ + L+ ++  CG +   R VF+ +   +  + W  + 
Sbjct: 64  LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV--------LKC--------------- 207
              ++ G  +ESL L  +M   G+  ++YT   V        L C               
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183

Query: 208 -----------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
                      + ++  +  +  A K+FD L ++ VV W  +IS Y+    AE+ +E+F 
Sbjct: 184 WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFL 243

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
           + L  GF  D  TM +++S C   G++  G  +H+ AL+  F+ +   +  L+DMY+K  
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSN 303

Query: 317 ---DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR-LFRGMVREGIEPDVYAIT 372
               +D A +VFE+M +  V+SWT++I+GY + GV +  +  LF  M+ E I+P+    +
Sbjct: 304 IEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYS 363

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           SIL ACA     + G+ VH ++ +++  ++  V NAL+ MYA+ G M +A  VFNQ+  +
Sbjct: 364 SILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER 423

Query: 433 DIVSWNT---------MIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGY 483
            ++S  T          IG +D+ ++          T A ++ A AS+  L +G+++H  
Sbjct: 424 SMISCITEGRDAPLDHRIGRMDMGIS--------SSTFASLISAAASVGMLTKGQQLHAM 475

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
            L+ G  +DR V+N++V MY +CG L  A   F+ +  +++ISWT MI+G   HG+   A
Sbjct: 476 TLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERA 535

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           ++ F+DM   G++P++V++I+VL ACSH GLV EG  +F  M+ +  + P++EHYACMVD
Sbjct: 536 LSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVD 595

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY 663
           LL+R+G + EA  FI  MP+  DA +W +LL  CR H  +++ E  A++V ELEP +   
Sbjct: 596 LLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAP 655

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
           YVLL+N+YA+A  W+EV ++R  +    L K  G SW+E++   + F AG +SHP A+ I
Sbjct: 656 YVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDI 715

Query: 724 ESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRV 783
              L  L  E+K  GY P T   L +  +  KE  L  HSEK+A+AFG++   A + IR+
Sbjct: 716 YGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRI 775

Query: 784 TKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KNLRVC DCH   K+MSK  RREI+LRDSNRFH  KDG CSC  +W
Sbjct: 776 FKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 204/420 (48%), Gaps = 37/420 (8%)

Query: 55  ISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSL 112
           I KT+V     +   I R+ +    E+A+E+   +  +  + D  T  S++  C +L S+
Sbjct: 215 IEKTVVV----WTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSV 270

Query: 113 EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG---DLKEGRRVFNKIDNGKVFIWNLL 169
             G ++HS+    G    D  +   LV M+        +    +VF ++    V  W  L
Sbjct: 271 RLGLQLHSLALRMGFA-SDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTAL 329

Query: 170 MHEYSKTG-NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG--NSRRVKDAHKLFDE 226
           +  Y ++G    + + LF +M +  I  +  T+S +LK  A +   +S R   AH +   
Sbjct: 330 ISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSN 389

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEML---------------------NLGFNV 265
            +    V  N ++S Y  +G  E+   VF ++                       +   +
Sbjct: 390 QAAAHTVG-NALVSMYAESGCMEEARRVFNQLYERSMISCITEGRDAPLDHRIGRMDMGI 448

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
             +T  +++S  A+ G L  G+ +HA  LKA F  +   +N+L+ MYS+CG L+ A R F
Sbjct: 449 SSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSF 508

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
            ++ +R+V+SWTSMI+G A+ G  + A+ LF  M+  G++P+     ++L AC+  GL+ 
Sbjct: 509 NELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVR 568

Query: 386 IGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            GK+    + +++ +   +     ++D+ A+ G + +A    N+MP+K D + W T++GA
Sbjct: 569 EGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGA 628



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 178/401 (44%), Gaps = 42/401 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++ A I  + + G  E  + VL+    +E  K +  TY SIL+ CA++   + G++VH+ 
Sbjct: 325 SWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAH 384

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK---------IDNGK---------- 162
           + +S       V G+ LV M+   G ++E RRVFN+         I  G+          
Sbjct: 385 VIKSNQAAAHTV-GNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRDAPLDHRIGR 443

Query: 163 ------VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
                    +  L+   +  G   +   L       G  +D +  + ++   +  G    
Sbjct: 444 MDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCG---Y 500

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++DA + F+EL DR+V+SW  MISG   +G AE+ L +F +M+  G   +  T + VLS 
Sbjct: 501 LEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSA 560

Query: 277 CANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS-VV 334
           C++ G +  G+    +          +     ++D+ ++ G +  A+    +M  ++  +
Sbjct: 561 CSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADAL 620

Query: 335 SWTSMI-AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
            W +++ A  + + +  G I     +  E  +P  Y + S L+A A  GL +    +   
Sbjct: 621 VWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADA--GLWDEVARIRSA 678

Query: 394 IKENDMQ-----SSLYVSNALMDMYAKCGSMADAESVFNQM 429
           +++N++      S + V N   +  A   S   A+ ++ ++
Sbjct: 679 MRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKL 719



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 163/368 (44%), Gaps = 61/368 (16%)

Query: 382 GLLEIGKDVHDYIKENDM-QSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNT 439
           G L +G+ +H  +   D+      V+N+L+ +Y++CG++A A +VF+ M  ++DIVSW  
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 440 MIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           M            +L L   ML++   P+  T+  +  AC     L          L H 
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFP-HELYCLVGGVVLGLVHK 180

Query: 489 I---SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
           +     D  V +A++DM  + G L  AR +FD +  K ++ WT++I+ Y       +A+ 
Sbjct: 181 MGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM------------------MRY 587
            F D  + G EPD  +  S++ AC+  G V  G +  ++                  M  
Sbjct: 241 IFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYA 300

Query: 588 ECNIEPKLEHYACMV-------DLLSRTGNLSEAYR-----------FIEMM--PVAPDA 627
           + NIE  ++ YA  V       D++S T  +S   +           F EM+   + P+ 
Sbjct: 301 KSNIEQAMD-YANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNH 359

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVL---LANVYAEAEKWEEVKKLR 684
             + S+L  C    +     +V  HV  ++ +    + +   L ++YAE+   EE +++ 
Sbjct: 360 ITYSSILKACANISDHDSGRQVHAHV--IKSNQAAAHTVGNALVSMYAESGCMEEARRVF 417

Query: 685 EKISRRGL 692
            ++  R +
Sbjct: 418 NQLYERSM 425


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 245/625 (39%), Positives = 385/625 (61%), Gaps = 13/625 (2%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGC 277
           D+  +FD+L  +++  WN ++S Y  N + E  + +F E++++     D  T+  V+  C
Sbjct: 159 DSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC 218

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI-RVFEKMGERSVVSW 336
           A    L  G+ +H  A K     ++   N L+ MY KCG ++ A+ RVF+ M  ++V SW
Sbjct: 219 AGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSW 278

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            +++ GYA+      A+ L+  M   G++PD + I S+L AC+    L  G+++H +   
Sbjct: 279 NALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALR 338

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           N +    ++  +L+ +Y  CG    A+ +F+ M  + +VSWN MI           A++L
Sbjct: 339 NGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINL 398

Query: 447 FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  ML +  +P  + + C+  AC+ L+AL  G+E+H + L+  ++ D  V+++I+DMY K
Sbjct: 399 FRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAK 458

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
            G + L++ +FD +  KD+ SW ++IAGYG+HG G +A+  F  M + G++PD+ +F  +
Sbjct: 459 GGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGI 518

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L ACSH+GLV++G  +FN M    NIEPKLEHY C+VD+L R G + +A R IE MP  P
Sbjct: 519 LMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDP 578

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
           D+ IW SLL  CRIH  + L EKVA  + ELEP+    YVL++N++A + KW++V+++R 
Sbjct: 579 DSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRG 638

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
           ++   GL+K+ GCSWIE+ GKV+ F+ G    P  +++    +RL +++   GY P T  
Sbjct: 639 RMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGS 698

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L + +E +K   L GHSEKLA++FG+LN   G  +RV KNLR+CGDCH  AKF+SK   
Sbjct: 699 VLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVN 758

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           R+IV+RD+ RFHHF+DG CSC  +W
Sbjct: 759 RDIVVRDNKRFHHFRDGICSCGDYW 783



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 163/586 (27%), Positives = 290/586 (49%), Gaps = 53/586 (9%)

Query: 38  VSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLY-SSEKSKIDT 96
           ++S S S+ T    S S + +   +  +   EI + CE GNL++A++ L   S+   +D+
Sbjct: 42  IASLSLSAQTRQTKSLSFANSSTNRQFSSLHEIKKLCESGNLKEALDFLQRESDDVVLDS 101

Query: 97  KTYCS----ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
                    +LQ C   K +E G+++H ++  S    +D VL ++++ M+  CG   + R
Sbjct: 102 AQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSR 161

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKC---- 207
            VF+K+    +F WN ++  Y++   F++++ +F ++ S+     D++T  CV+K     
Sbjct: 162 MVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGL 221

Query: 208 ----------------------------LAVVGNSRRVKDA-HKLFDELSDRDVVSWNCM 238
                                       +A+ G    V++A  ++FD +  + V SWN +
Sbjct: 222 LDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNAL 281

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           + GY  N    K L+++ +M + G + D  T+ ++L  C+   +L +G  +H FAL+   
Sbjct: 282 LCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGL 341

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
           + +     +LL +Y  CG    A  +F+ M  RS+VSW  MIAGY++ G+ D AI LFR 
Sbjct: 342 AVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQ 401

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M+ +GI+P   AI  +  AC+    L +GK++H +  +  +   ++VS++++DMYAK G 
Sbjct: 402 MLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC 461

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPA 467
           +  ++ +F+++  KD+ SWN +I           AL+LF  ML+   +PD  T   IL A
Sbjct: 462 IGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMA 521

Query: 468 CASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA-KDLI 525
           C+    +E G E    +L  H I         +VDM  + G +  A  L + +P   D  
Sbjct: 522 CSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSR 581

Query: 526 SWTIMIAGYGMHG-FGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            W+ +++   +HG  G         +     +P+    IS L+A S
Sbjct: 582 IWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGS 627



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 216/417 (51%), Gaps = 22/417 (5%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            M  +L  C     +  GR +H     +  F  +   N  ++ MYS CG    +  VF+K
Sbjct: 107 AMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDK 166

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDGLLE- 385
           +  +++  W ++++ Y R  +F+ A+ +F  ++     +PD + +  ++ ACA  GLL+ 
Sbjct: 167 LRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLDL 224

Query: 386 -IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA-ESVFNQMPVKDIVSWNTMI-- 441
            +G+ +H    + D+ S ++V NAL+ MY KCG + +A + VF+ M  K + SWN ++  
Sbjct: 225 GLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCG 284

Query: 442 --------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    ALDL++ M  +  +PD  T+  +L AC+ + +L  G EIHG+ LR+G++ D
Sbjct: 285 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 344

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             +  +++ +Y+ CG    A+ LFD +  + L+SW +MIAGY  +G   +AI  F  M  
Sbjct: 345 PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 404

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
            GI+P E++ + V  ACS    +  G +  +    + ++   +   + ++D+ ++ G + 
Sbjct: 405 DGIQPYEIAIMCVCGACSQLSALRLG-KELHCFALKAHLTEDIFVSSSIIDMYAKGGCIG 463

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL 667
            + R  + +    D   W  ++ G  IH   K A ++ E +    L+PD+  +  +L
Sbjct: 464 LSQRIFDRLR-EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGIL 519



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 183/407 (44%), Gaps = 77/407 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  + +  +  KA+++      S +D    T  S+L  C+ +KSL  G+++H   
Sbjct: 277 SWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFA 336

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +G+ +D   +G  L+ +++ CG     + +F+ +++  +  WN+++  YS+ G   E+
Sbjct: 337 LRNGLAVDP-FIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEA 395

Query: 183 LYLFKKMQSLGIAADSYTFSCV---------------LKCLAVVGN-------SRRVKD- 219
           + LF++M S GI        CV               L C A+  +       S  + D 
Sbjct: 396 INLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDM 455

Query: 220 ---------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                    + ++FD L ++DV SWN +I+GY  +G  ++ LE+F++ML LG   D  T 
Sbjct: 456 YAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTF 515

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             +L  C++ G +  G               + + N +L++++                E
Sbjct: 516 TGILMACSHAGLVEDG---------------LEYFNQMLNLHNI---------------E 545

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
             +  +T ++    R G  D A+RL   M     +PD    +S+L +C   G L +G+ V
Sbjct: 546 PKLEHYTCVVDMLGRAGRIDDALRLIEEMPG---DPDSRIWSSLLSSCRIHGNLGLGEKV 602

Query: 391 HDYIKE---NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
            + + E      ++ + +SN    ++A  G   D   V  +M  KDI
Sbjct: 603 ANKLLELEPEKPENYVLISN----LFAGSGKWDDVRRVRGRM--KDI 643


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 256/674 (37%), Positives = 388/674 (57%), Gaps = 46/674 (6%)

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVL----KCLAVVGNSRRVKDAHKLFDELSD 229
           + +G+    L+ F   Q  G A+D +  + ++    KC  +V        A  +FD++ +
Sbjct: 101 ASSGDLGRELHGFA--QKNGFASDVFVCNALMNMYEKCGCLV-------SARLVFDQMPE 151

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           RDVVSW  M+  Y+ +    + L + +EM  +G  +    ++++++   N   +  GRAV
Sbjct: 152 RDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAV 211

Query: 290 HAFALKACFSK--EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
           H + ++    +  E+S    L+DMY K G L  A R+F+++ +RSVVSWT MIAG  R  
Sbjct: 212 HGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSC 271

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
             D   + F  M+ E + P+   + S++  C   G L++GK  H Y+  N    SL +  
Sbjct: 272 RLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVT 331

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEP 456
           AL+DMY KCG +  A ++FN +  KD+  W+ +I A           +LFV ML N  +P
Sbjct: 332 ALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKP 391

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           + VTM  +L  CA   AL+ G+  H YI RHG+  D  +  A+++MY KCG + +ARSLF
Sbjct: 392 NNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLF 451

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           +    +D+  W  M+AG+ MHG G +A+  F++M   G+EP++++F+S+ +ACSHSGL  
Sbjct: 452 NEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL-- 509

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
                             +EHY C+VDLL R G+L EA+  IE MP+ P+  IWG+LL  
Sbjct: 510 ------------------MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAA 551

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
           C++H  + L E  A  + EL+P N GY VL +N+YA A++W +V  +RE +S  G+KK P
Sbjct: 552 CKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEP 611

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
           G SWIE+ G V+ F +G  +     K+  ++  + ++++  GY P T   L+N DE EKE
Sbjct: 612 GLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKE 671

Query: 757 VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
            AL  HSEKLA AFG+++   G  IR+ KNLR+C DCH   K +SK   R I++RD NRF
Sbjct: 672 SALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRF 731

Query: 817 HHFKDGRCSCRGFW 830
           HHF +G CSC G+W
Sbjct: 732 HHFSEGYCSCMGYW 745



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 223/440 (50%), Gaps = 18/440 (4%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVL 274
           +  + H  F +       ++N +IS Y  N + +     +  M  N    +D   + ++L
Sbjct: 36  QFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLL 95

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             CA   +   GR +H FA K  F+ ++   N L++MY KCG L  A  VF++M ER VV
Sbjct: 96  KACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVV 155

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SWT+M+  Y R   F  A+RL R M   G++    A+ S++        ++ G+ VH YI
Sbjct: 156 SWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYI 215

Query: 395 KEN--DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------- 441
             N  D +  + ++ AL+DMY K G +A A+ +F+++  + +VSW  MI           
Sbjct: 216 VRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDE 275

Query: 442 GALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           GA +    + +   P+ +T+  ++  C  +  L+ G+  H Y+LR+G      +  A++D
Sbjct: 276 GAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALID 335

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KCG +  AR+LF+ +  KD+  W+++I+ Y            F +M    ++P+ V+
Sbjct: 336 MYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVT 395

Query: 562 FISVLYACSHSGLVDEG-WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
            +S+L  C+ +G +D G W    + R+   ++  LE    ++++ ++ G+++ A R +  
Sbjct: 396 MVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILE--TALINMYAKCGDVTIA-RSLFN 452

Query: 621 MPVAPDATIWGSLLCGCRIH 640
             +  D  +W +++ G  +H
Sbjct: 453 EAMQRDIRMWNTMMAGFSMH 472



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 15/163 (9%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T  S+L LCA+  +L+ GK  H+ I   G+ +D  +L + L+ M+  CGD+   R
Sbjct: 390 KPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDV-ILETALINMYAKCGDVTIAR 448

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------ 206
            +FN+     + +WN +M  +S  G  KE+L LF +M+S G+  +  TF  +        
Sbjct: 449 SLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSG 508

Query: 207 ------CLA-VVGNSRRVKDAHKLFDELSDR-DVVSWNCMISG 241
                 CL  ++G +  + +AH + + +  R + + W  +++ 
Sbjct: 509 LMEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAA 551


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 286/814 (35%), Positives = 449/814 (55%), Gaps = 52/814 (6%)

Query: 64  KNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSI 121
           K +N  +  +      ++A+ +  S   S +  D  T   +  +CA     + G++VH  
Sbjct: 59  KEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQ 118

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             + G+V D   +G+ LV M++   ++ +GRRVF+++    V  W  L+  YS  G +  
Sbjct: 119 CVKFGLV-DHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGY 177

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCL---AVVGNSRRV--------------------- 217
              LF +MQ  G+  + YT S V+  L    VVG   +V                     
Sbjct: 178 VWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLIS 237

Query: 218 --------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                   +DA  +FD++  RD V+WN MI+GY+ NG   +  E+F +M   G      T
Sbjct: 238 LYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMT 297

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
             +V+  CA+   L   + +   ALK+ F+ +      L+   SKC ++D A+ +F  M 
Sbjct: 298 FASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLME 357

Query: 330 E-RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
           E ++VVSWT+MI+G  + G  D A+ LF  M REG++P+ +  ++IL       + E+  
Sbjct: 358 EGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHA 417

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
           +V   IK N  +SS  V  AL+D Y K G+  DA  VF  +  KD+++W+ M+       
Sbjct: 418 EV---IKTNYERSS-SVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTG 473

Query: 443 ----ALDLFVAML-QNFEPDGVTMACILPACAS-LAALERGREIHGYILRHGISADRNVA 496
               A  LF  ++ +  +P+  T + ++ ACAS  AA E+G++ H Y ++  ++    V+
Sbjct: 474 ETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVS 533

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           +A+V MY K G +  A  +F     +DL+SW  MI+GY  HG    A+  F++M++  ++
Sbjct: 534 SALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMD 593

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
            D V+FI V+ AC+H+GLV++G ++FN M  + +I P ++HY+CM+DL SR G L +A  
Sbjct: 594 VDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMG 653

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
            I  MP  P AT+W +LL   R+H  V+L E  AE +  L+P+++  YVLL+N+YA A  
Sbjct: 654 IINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGN 713

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           W+E   +R+ + +R +KK PG SWIE+K K   F+AG  +HP + +I S L  L + +K 
Sbjct: 714 WQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKD 773

Query: 737 EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
            GY P T+    + ++ +KE  L  HSE+LA+AFG++  P    I++ KNLRVCGDCH  
Sbjct: 774 AGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNF 833

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            K +S   +R IV+RDSNRFHHFKDG CSC  +W
Sbjct: 834 TKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 229/444 (51%), Gaps = 20/444 (4%)

Query: 220 AHKLFDELSDRDVV--SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           AH LFD++  R       N ++  Y  +   ++ L +F  +L+     D +T+  V + C
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A       GR VH   +K      +S   +L+DMY K  +++   RVF++MGER+VVSWT
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           S++AGY+  G++     LF  M  EG+ P+ Y +++++ A   +G++ IG  VH  + ++
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLF 447
             + ++ V N+L+ +Y++ G + DA  VF++M ++D V+WN+MI             ++F
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIF 283

Query: 448 VAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M L   +P  +T A ++ +CASL  L   + +    L+ G + D+ V  A++    KC
Sbjct: 284 NKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKC 343

Query: 507 GVLVLARSLFDMI-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
             +  A SLF ++   K+++SWT MI+G   +G    A+  F+ MR+ G++P+  ++ ++
Sbjct: 344 KEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAI 403

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L    +   V E     +    + N E        ++D   + GN  +A +  E++  A 
Sbjct: 404 L-TVHYPVFVSE----MHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIE-AK 457

Query: 626 DATIWGSLLCGCRIHHEVKLAEKV 649
           D   W ++L G     E + A K+
Sbjct: 458 DLMAWSAMLAGYAQTGETEEAAKL 481


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 258/579 (44%), Positives = 361/579 (62%), Gaps = 17/579 (2%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T   ++  CA   +L  G  VH   + + F ++      L++MY + G +D A +VF++ 
Sbjct: 80  TFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDET 139

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL----L 384
            ER++  W ++    A  G     + L+  M   GI  D +  T +L AC    L    L
Sbjct: 140 RERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPL 199

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
           + GK++H +I  +  +++++V   L+D+YAK GS++ A SVF  MP K+ VSW+ MI   
Sbjct: 200 QKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACF 259

Query: 443 --------ALDLFVAML---QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                   AL+LF  M+    +  P+ VTM  +L ACA LAALE+G+ IHGYILR G+ +
Sbjct: 260 AKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDS 319

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
              V NA++ MY +CG +++ + +FD +  +D++SW  +I+ YGMHGFG  AI  F +M 
Sbjct: 320 ILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMI 379

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
             G  P  +SFI+VL ACSH+GLV+EG   F  M  +  I P +EHYACMVDLL R   L
Sbjct: 380 HQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 439

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
            EA + IE M   P  T+WGSLL  CRIH  V+LAE+ +  +FELEP N G YVLLA++Y
Sbjct: 440 DEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIY 499

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           AEA+ W E K + + +  RGL+K PGCSWIE+K KV  FV+    +P  ++I +LL +L 
Sbjct: 500 AEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLS 559

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
            EMK +GY P+T   L + DE EKE  + GHSEKLA+AFG++N   G+TIR+ KNLR+C 
Sbjct: 560 NEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCE 619

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH + KF+SK A REI++RD NRFHHFKDG CSC  +W
Sbjct: 620 DCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 186/403 (46%), Gaps = 42/403 (10%)

Query: 25  KFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAM 83
           +   + PS   +  +S   S   ++ +S + S  L+   K N N  I   C+ GNL++A+
Sbjct: 8   QIVRHAPSQSHLCYNSHVSSRVPVSFVSLNPSANLMNDIKGNNNQLIQSLCKGGNLKQAI 67

Query: 84  EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFV 143
            +L          +T+  ++  CA   SL DG  VH  +  SG    D  L +KL+ M+ 
Sbjct: 68  HLLCCEPNPT--QRTFEHLICSCAQQNSLSDGLDVHRRLVSSGF-DQDPFLATKLINMYY 124

Query: 144 TCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
             G +   R+VF++     +++WN L    +  G  KE L L+ +M  +GI +D +T++ 
Sbjct: 125 ELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTF 184

Query: 204 VLKC------------------------------------LAVVGNSRRVKDAHKLFDEL 227
           VLK                                     L V      V  A+ +F  +
Sbjct: 185 VLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAM 244

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN--VDLATMVTVLSGCANCGALMF 285
             ++ VSW+ MI+ +  N +  K LE+F+ M+    +   +  TMV VL  CA   AL  
Sbjct: 245 PTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQ 304

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ +H + L+      +   N L+ MY +CG++    RVF+ M  R VVSW S+I+ Y  
Sbjct: 305 GKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGM 364

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            G    AI++F  M+ +G  P   +  ++L AC+  GL+E GK
Sbjct: 365 HGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGK 407



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 175/360 (48%), Gaps = 20/360 (5%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           ++L+      G+LK+   +     N     +  L+   ++  +  + L + +++ S G  
Sbjct: 51  NQLIQSLCKGGNLKQAIHLLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFD 110

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
            D +  + ++     +G+  R   A K+FDE  +R +  WN +       G  ++ L+++
Sbjct: 111 QDPFLATKLINMYYELGSIDR---ARKVFDETRERTIYVWNALFRALAMVGCGKELLDLY 167

Query: 256 KEMLNLGFNVDLATMVTVLSGCA----NCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
            +M  +G   D  T   VL  C     +   L  G+ +HA  L+  +   I    TLLD+
Sbjct: 168 VQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDV 227

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVY 369
           Y+K G +  A  VF  M  ++ VSW++MIA +A+  +   A+ LF+ M+ E  +  P+  
Sbjct: 228 YAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSV 287

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            + ++L ACA    LE GK +H YI    + S L V NAL+ MY +CG +   + VF+ M
Sbjct: 288 TMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNM 347

Query: 430 PVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGR 478
             +D+VSWN++I           A+ +F  M+ Q   P  ++   +L AC+    +E G+
Sbjct: 348 KNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGK 407



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 123/287 (42%), Gaps = 41/287 (14%)

Query: 95  DTKTYCSILQLCA----DLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           D  TY  +L+ C      +  L+ GK++H+ I   G   +  V+ + L+ ++   G +  
Sbjct: 178 DRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVM-TTLLDVYAKFGSVSY 236

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYTFSCVLKCL 208
              VF  +       W+ ++  ++K     ++L LF+ M  ++     +S T   VL+  
Sbjct: 237 ANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQAC 296

Query: 209 AVVGNSRRVKDAH--------------------------------KLFDELSDRDVVSWN 236
           A +    + K  H                                ++FD + +RDVVSWN
Sbjct: 297 AGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWN 356

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL-K 295
            +IS Y  +G  +K +++F+ M++ G +    + +TVL  C++ G +  G+ +    L K
Sbjct: 357 SLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSK 416

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIA 341
                 +     ++D+  +   LD AI++ E M  E     W S++ 
Sbjct: 417 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLG 463



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 17/187 (9%)

Query: 52  SASISKTLVC--KTKNY---NAEIGRFCEVGNLEKAMEV----LYSSEKSKIDTKTYCSI 102
           S S + ++ C   TKN+   +A I  F +     KA+E+    +  +  S  ++ T  ++
Sbjct: 233 SVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNV 292

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLG--SKLVFMFVTCGDLKEGRRVFNKIDN 160
           LQ CA L +LE GK +H  I   G+   D +L   + L+ M+  CG++  G+RVF+ + N
Sbjct: 293 LQACAGLAALEQGKLIHGYILRRGL---DSILPVLNALITMYGRCGEILMGQRVFDNMKN 349

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
             V  WN L+  Y   G  K+++ +F+ M   G +    +F  VL   +  G    V++ 
Sbjct: 350 RDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAG---LVEEG 406

Query: 221 HKLFDEL 227
             LF+ +
Sbjct: 407 KILFESM 413



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 17/248 (6%)

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           P   T   ++ +CA   +L  G ++H  ++  G   D  +A  +++MY + G +  AR +
Sbjct: 76  PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL- 574
           FD    + +  W  +     M G G + +  +  M   GI  D  ++  VL AC  S L 
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195

Query: 575 ---VDEGWRFF-NMMR--YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
              + +G     +++R  YE NI         ++D+ ++ G++S A      MP   +  
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHV----MTTLLDVYAKFGSVSYANSVFCAMPTK-NFV 250

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEP-DNTGYYVLLANVY---AEAEKWEEVKKLR 684
            W +++  C   +E+ +       +  LE  D+    V + NV    A     E+ K + 
Sbjct: 251 SWSAMI-ACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIH 309

Query: 685 EKISRRGL 692
             I RRGL
Sbjct: 310 GYILRRGL 317


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 276/780 (35%), Positives = 421/780 (53%), Gaps = 52/780 (6%)

Query: 100 CSILQLCADLKSLED---GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           C+   L   LK + D   G +VH++   +G    D  + + LV M+   G + + RRVF+
Sbjct: 101 CNEFALPVVLKCVPDAQLGAQVHAMAMATGFG-SDVFVANALVAMYGGFGFMDDARRVFD 159

Query: 157 KIDNGKVFI-WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR 215
           +  + +  + WN LM  Y K     +++ +F +M   GI    + FSCV+   A  G+  
Sbjct: 160 EAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN--ACTGSRN 217

Query: 216 ----------------------------------RVKDAHKLFDELSDRDVVSWNCMISG 241
                                             RV  A  +F+++ D DVVSWN +ISG
Sbjct: 218 IDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISG 277

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
            + NG   + +E+  +M + G   ++  + ++L  CA  GA   GR +H F +KA    +
Sbjct: 278 CVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSD 337

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
                 L+DMY+K   LD A++VF+ M  R ++ W ++I+G +  G  D A  +F G+ +
Sbjct: 338 DYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRK 397

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           EG+  +   + ++L + A        + VH   ++       +V N L+D Y KC  ++D
Sbjct: 398 EGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSD 457

Query: 422 AESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVTMACILPACAS 470
           A  VF +    DI++  +MI          GA+ LF+ ML +  EPD   ++ +L ACAS
Sbjct: 458 AIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACAS 517

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           L+A E+G+++H ++++    +D    NA+V  Y KCG +  A   F  +P + ++SW+ M
Sbjct: 518 LSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAM 577

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I G   HG G  A+  F  M   GI P+ ++  SVL AC+H+GLVDE  R+FN M+    
Sbjct: 578 IGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFG 637

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           I+   EHY+CM+DLL R G L +A   +  MP   +A++WG+LL   R+H + +L +  A
Sbjct: 638 IDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAA 697

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
           E +F LEP+ +G +VLLAN YA +  W EV K+R+ +    +KK P  SW+E+K KV+ F
Sbjct: 698 EKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTF 757

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
           + G  SHP  K+I S L  L   M + GY P     L + D  EKE+ L  HSE+LA+AF
Sbjct: 758 IVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAF 817

Query: 771 GILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +L+ P G  IRV KNLR+C DCH   KF+S    REI++RD NRFHHF+DG CSC  +W
Sbjct: 818 ALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 229/484 (47%), Gaps = 46/484 (9%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           +  ++  C   ++++ G++VH+++   G    D    + LV M+V  G +     +F K+
Sbjct: 205 FSCVVNACTGSRNIDAGRQVHAMVVRMGYE-KDVFTANALVDMYVKMGRVDIASVIFEKM 263

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------ 212
            +  V  WN L+      G+   ++ L  +M+S G+  + +  S +LK  A  G      
Sbjct: 264 PDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGR 323

Query: 213 --------------------------NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                                      +  + DA K+FD +S RD++ WN +ISG    G
Sbjct: 324 QIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGG 383

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
             ++   +F  +   G  V+  T+  VL   A+  A    R VHA A K  F  +    N
Sbjct: 384 RHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVN 443

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L+D Y KC  L  AIRVFE+     +++ TSMI   ++    +GAI+LF  M+R+G+EP
Sbjct: 444 GLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEP 503

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D + ++S+L+ACA     E GK VH ++ +    S  +  NAL+  YAKCGS+ DAE  F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALE 475
           + +P + +VSW+ MIG          AL+LF  M+ +   P+ +TM  +L AC     ++
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623

Query: 476 RGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAG 533
             +     +    GI       + ++D+  + G L  A  L + +P +   S W  ++  
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 683

Query: 534 YGMH 537
             +H
Sbjct: 684 SRVH 687



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 193/382 (50%), Gaps = 19/382 (4%)

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T+   L+  A   AL+ G  +HA  LK+ F    S  N L+  YSKC     A RVF++
Sbjct: 5   GTISQQLTRYAAAQALLPGAHLHANLLKSGFLA--SLRNHLISFYSKCRRPCCARRVFDE 62

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           + +   VSW+S++  Y+  G+   AI+ F GM  EG+  + +A+  +L  C  D   ++G
Sbjct: 63  IPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL-KCVPDA--QLG 119

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM-PVKDIVSWNTMIG---- 442
             VH         S ++V+NAL+ MY   G M DA  VF++    ++ VSWN ++     
Sbjct: 120 AQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVK 179

Query: 443 ------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 A+ +F  M+    +P     +C++ AC     ++ GR++H  ++R G   D   
Sbjct: 180 NDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFT 239

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
           ANA+VDMYVK G + +A  +F+ +P  D++SW  +I+G  ++G    AI     M+ +G+
Sbjct: 240 ANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGL 299

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
            P+     S+L AC+ +G  D G +    M  + N +        +VD+ ++   L +A 
Sbjct: 300 VPNVFMLSSILKACAGAGAFDLGRQIHGFM-IKANADSDDYIGVGLVDMYAKNHFLDDAM 358

Query: 616 RFIEMMPVAPDATIWGSLLCGC 637
           +  + M    D  +W +L+ GC
Sbjct: 359 KVFDWMS-HRDLILWNALISGC 379



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 197/417 (47%), Gaps = 41/417 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSII 122
           ++NA I      G+  +A+E+L   + S +    +   SIL+ CA   + + G+++H  +
Sbjct: 270 SWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 329

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++    DD  +G  LV M+     L +  +VF+ + +  + +WN L+   S  G   E+
Sbjct: 330 IKANADSDD-YIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 388

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSRRVK----------DAH-------- 221
             +F  ++  G+  +  T + VLK    L     +R+V           DAH        
Sbjct: 389 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 448

Query: 222 -----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                      ++F+E S  D+++   MI+        E  +++F EML  G   D   +
Sbjct: 449 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++L+ CA+  A   G+ VHA  +K  F  +    N L+  Y+KCG ++ A   F  + E
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R VVSW++MI G A+ G    A+ LF  MV EGI P+   +TS+L AC   GL++  K  
Sbjct: 569 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628

Query: 391 HDYIKEN---DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +KE    D     Y  + ++D+  + G + DA  + N MP +   S W  ++GA
Sbjct: 629 FNSMKEMFGIDRTEEHY--SCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 683


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 264/677 (38%), Positives = 401/677 (59%), Gaps = 17/677 (2%)

Query: 165 IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLF 224
           I N L+  +S   + K   ++   +  LG+  D+Y  + VL+     GN+     + ++ 
Sbjct: 12  IKNRLIQGFSCLKHLK---HIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNY---SFRIL 65

Query: 225 DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALM 284
           D+  + ++  +N MI G + N   ++ +E++  M   G + D  T   VL  CA      
Sbjct: 66  DQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSE 125

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            G  +H+  +KA    +     +L+++Y+KCG +D A +VF+ + +++  SWT+ I+GY 
Sbjct: 126 LGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYV 185

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
             G    AI +FR ++  G+ PD +++  +L AC   G L  G+ + +YI EN M  +++
Sbjct: 186 GVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVF 245

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QN 453
           V+ AL+D Y KCG+M  A SVF+ M  K+IVSW++MI           ALDLF  ML + 
Sbjct: 246 VATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEG 305

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
            +PD   M  +L +CA L ALE G      I  +    +  +  A++DMY KCG +  A 
Sbjct: 306 LKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAW 365

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
            +F  +  KD + W   I+G  M G   DA+  F  M ++GI+PD  +F+ +L AC+H+G
Sbjct: 366 EVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAG 425

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
           LV+EG R+FN M     + P++EHY CMVDLL R G L EA++ I+ MP+  +A +WG+L
Sbjct: 426 LVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGAL 485

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
           L GCR+H + +L E V + +  LEP ++G YVLL+N+YA + KWEE  K+R  +S RG+K
Sbjct: 486 LGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVK 545

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           K PG SWIE+ G V+ F+ G +SHP ++KI + L  L  ++K  GY P T + L + +E 
Sbjct: 546 KIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEE 605

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
           EKE  +  HSEKLA+AFG+++      I V KNLRVCGDCHE  K +S+ A REI++RD+
Sbjct: 606 EKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDN 665

Query: 814 NRFHHFKDGRCSCRGFW 830
           NRFH F DG CSC+ +W
Sbjct: 666 NRFHCFTDGLCSCKDYW 682



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 231/491 (47%), Gaps = 46/491 (9%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S I TK+     +L      L+  K +H+ +   G+  D  +L   L F F   G+    
Sbjct: 3   SLIVTKSAGIKNRLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSF-NFGNTNYS 61

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
            R+ ++     +F++N ++        F+ES+ ++  M+  G++ DS+TF  VLK  A V
Sbjct: 62  FRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARV 121

Query: 212 GNSRR--------------------------------VKDAHKLFDELSDRDVVSWNCMI 239
            +S                                  + +A K+FD++ D++  SW   I
Sbjct: 122 LDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATI 181

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           SGY+  G   + +++F+ +L +G   D  ++V VLS C   G L  G  +  +  +    
Sbjct: 182 SGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMV 241

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
           + +     L+D Y KCG+++ A  VF+ M E+++VSW+SMI GYA  G+   A+ LF  M
Sbjct: 242 RNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKM 301

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           + EG++PD YA+  +L +CA  G LE+G    + I  N+   +  +  AL+DMYAKCG M
Sbjct: 302 LNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRM 361

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPAC 468
             A  VF  M  KD V WN  I           AL LF  M ++  +PD  T   +L AC
Sbjct: 362 DRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCAC 421

Query: 469 ASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLIS 526
                +E GR     +     ++ +      +VD+  + G L  A  L   +P + + I 
Sbjct: 422 THAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIV 481

Query: 527 WTIMIAGYGMH 537
           W  ++ G  +H
Sbjct: 482 WGALLGGCRLH 492



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 135/314 (42%), Gaps = 37/314 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  +  VG   +A+++     +  +  D+ +   +L  C     L  G+ +   I
Sbjct: 176 SWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYI 235

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            E+G+V  +  + + LV  +  CG+++  R VF+ +    +  W+ ++  Y+  G  KE+
Sbjct: 236 TENGMV-RNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEA 294

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG-------------------NS--------- 214
           L LF KM + G+  D Y    VL   A +G                   NS         
Sbjct: 295 LDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDM 354

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R+  A ++F  +  +D V WN  ISG   +G  +  L +F +M   G   D  T 
Sbjct: 355 YAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTF 414

Query: 271 VTVLSGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           V +L  C + G +  GR   ++       + EI     ++D+  + G LD A ++ + M 
Sbjct: 415 VGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMP 474

Query: 330 -ERSVVSWTSMIAG 342
            E + + W +++ G
Sbjct: 475 MEANAIVWGALLGG 488


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 254/619 (41%), Positives = 370/619 (59%), Gaps = 44/619 (7%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +FDE+  ++VV +N MI  Y+ N +    L VFK M   G + D  T   VL   +    
Sbjct: 93  IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSED 152

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G  +HA  ++      +   N L+ MY KCG L  A RV ++M  R VVSW S++AG
Sbjct: 153 LWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAG 212

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
            AR G FD A+ + + M   G++PD   + S+L A                         
Sbjct: 213 CARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA------------------------- 247

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ 452
             V+N  +D      +++  + +F ++  K +VSWN MI           A+D+F+ M  
Sbjct: 248 --VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMED 299

Query: 453 N-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
           +  +PD +++A +LPAC  L+AL  GR IH Y++R  +  +  + NA++DMY KCG L  
Sbjct: 300 HAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEY 359

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           AR +FD +  +D++SWT MI+ YGM+G G DA++ F+ M+  G+ PD ++F+SVL ACSH
Sbjct: 360 AREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSH 419

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           +GL+DEG  +F +M  EC I P++EH+ CMVDLL R G + EAY FI+ MP+ P+  +WG
Sbjct: 420 AGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWG 479

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           +LL  CR++  + +    A+ +F+L P+ +GYYVLL+N+YA+A +WE+V  +R  +  +G
Sbjct: 480 ALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKG 539

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
           +KK PG S  E+  +V+ F+AG  SHP +K+I   L     +MK  GY P+T  AL + +
Sbjct: 540 IKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVE 599

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           E +KE  L  HSEKLA+AF ILN   G  IR+TKNLRVCGDCH  AK +SK   REI +R
Sbjct: 600 EEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIR 659

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           D+NRFHHF +G CSC  +W
Sbjct: 660 DTNRFHHFYNGVCSCGDYW 678



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 199/434 (45%), Gaps = 80/434 (18%)

Query: 89  SEKSKIDTKTYC-SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           ++++ + T+  C  IL    D+K L   KK+HS IC    +  +  LG KL+  +  CG+
Sbjct: 30  TQQNVVLTENLCGQILDKNPDIKYL---KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGE 86

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
               R +F++I    V  +N+++  Y     + ++L +FK M   GI  D YT+ CVLK 
Sbjct: 87  PWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKA 146

Query: 208 --------------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSW 235
                                           +++ G    + +A ++ D++  RDVVSW
Sbjct: 147 SSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSW 206

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N +++G   NG  +  LEV KEM  LG   D  TM ++L                     
Sbjct: 207 NSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLP-------------------- 246

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
                  +  NT LD  S   ++      F K+  +S+VSW  MIA Y    +   A+ +
Sbjct: 247 -------AVTNTCLDNVSFVKEM------FMKLANKSLVSWNVMIAVYMNNSMPAEAVDI 293

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           F  M    ++PD  +I S+L AC     L +G+ +H+Y+    +Q +L + NAL+DMYAK
Sbjct: 294 FLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAK 353

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACI 464
           CG +  A  VF+QM  +D+VSW +MI           A+ LF  M      PD +    +
Sbjct: 354 CGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSV 413

Query: 465 LPACASLAALERGR 478
           L AC+    L+ GR
Sbjct: 414 LSACSHAGLLDEGR 427



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 193/361 (53%), Gaps = 8/361 (2%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  TY  +L+  +  + L  G ++H+ +   G+ ++  V G+ L+ M+  CG L E  RV
Sbjct: 136 DHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV-GNGLISMYGKCGCLVEACRV 194

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--VVG 212
            +++    V  WN L+   ++ G F ++L + K+M+ LG+  D+ T + +L  +    + 
Sbjct: 195 LDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLD 254

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           N   VK+   +F +L+++ +VSWN MI+ Y+ N +  + +++F +M +   + D  ++ +
Sbjct: 255 NVSFVKE---MFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIAS 311

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           VL  C +  AL+ GR +H + ++      +   N L+DMY+KCG L+ A  VF++M  R 
Sbjct: 312 VLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRD 371

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           VVSWTSMI+ Y   G    A+ LF  M   G+ PD  A  S+L AC+  GLL+ G+    
Sbjct: 372 VVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFK 431

Query: 393 YIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLFVAM 450
            + E   +   +     ++D+  + G + +A     QMP++ +   W  ++ A  ++  M
Sbjct: 432 LMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNM 491

Query: 451 L 451
           +
Sbjct: 492 I 492



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 9/198 (4%)

Query: 478 REIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           +++H  I + H + ++ ++   ++  Y  CG     R +FD IP K+++ + +MI  Y  
Sbjct: 55  KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 114

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           +    DA+  F +M   GI+PD  ++  VL A S S   ++ W    +      +   L 
Sbjct: 115 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGS---EDLWVGMQIHAAVVRVGLDLN 171

Query: 597 HYA--CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE--H 652
            +    ++ +  + G L EA R ++ MP   D   W SL+ GC  + +   A +V +   
Sbjct: 172 VFVGNGLISMYGKCGCLVEACRVLDQMPCR-DVVSWNSLVAGCARNGQFDDALEVCKEME 230

Query: 653 VFELEPDNTGYYVLLANV 670
           +  L+PD      LL  V
Sbjct: 231 LLGLKPDAGTMASLLPAV 248


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/622 (41%), Positives = 372/622 (59%), Gaps = 45/622 (7%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
             K+FDE+SDR+VV +N MI  Y+ N   + GL VF+EM+N GF  D  T   VL  C+ 
Sbjct: 72  TRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSC 131

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L +G  +H   LK      +   N L+ MY KCG L  A RVF++M  + VVSW SM
Sbjct: 132 SENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSM 191

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           +AGYA    FD A+ + R M   G +PD   + S++ A A                    
Sbjct: 192 VAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVA----------------NTSS 235

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVA 449
           ++ LYV                 E +F  +  K+++SWN MI           A+DL++ 
Sbjct: 236 ENVLYV-----------------EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQ 278

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M +   EPD +T A +LPAC  L+AL  GR IH Y+ +  +  +  + N+++DMY +CG 
Sbjct: 279 MEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGC 338

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  A+ +FD +  +D+ SWT +I+ YGM G GC+A+A F +M  +G  PD ++F+++L A
Sbjct: 339 LDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSA 398

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSHSGL+DEG  +F  M  +  I P++EHYAC+VDLL R G + EAY  I+ MP+ P+  
Sbjct: 399 CSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNER 458

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           +W +LL  CR+   + +    A+++ +L P+ +GYYVLL+N+YA+A +W+EV ++R  + 
Sbjct: 459 VWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMK 518

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
           R+ ++K PG S +E+  +V+ F+AG +SHP +K+I   L  L  +MK  GY P+T  AL 
Sbjct: 519 RKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALH 578

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + +E +KE  L  HSEKLA+ F +LN    Q IR+TKNLRVCGDCH  AK +SK   REI
Sbjct: 579 DVEEEDKEGHLAVHSEKLAIVFALLNTQEYQ-IRITKNLRVCGDCHIAAKLISKIVEREI 637

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           ++RD+NRFHHFKDG CSC  +W
Sbjct: 638 IVRDTNRFHHFKDGVCSCGDYW 659



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 193/363 (53%), Gaps = 10/363 (2%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  TY  +L+ C+  ++L  G  +H  + + G+  +  V G+ L+ M+  CG L E R
Sbjct: 116 RPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFV-GNGLIAMYGKCGCLFEAR 174

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           RVF+++    V  WN ++  Y+    F ++L + ++M+  G   D  T + ++  +A   
Sbjct: 175 RVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANT- 233

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           +S  V    K+F  L  ++++SWN MI  Y+ N +  + ++++ +M       D  T  +
Sbjct: 234 SSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFAS 293

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           VL  C +  AL+ GR +H +  K      +   N+L+DMY++CG LD A RVF++M  R 
Sbjct: 294 VLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRD 353

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           V SWTS+I+ Y   G    A+ LF  M+  G  PD  A  +IL AC+  GLL+ G+    
Sbjct: 354 VASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGR---I 410

Query: 393 YIKE--NDMQSSLYVSN--ALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLF 447
           Y K+  +D + +  + +   L+D+  + G + +A ++  QMP++ +   W T++ +  +F
Sbjct: 411 YFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVF 470

Query: 448 VAM 450
             M
Sbjct: 471 TNM 473



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 195/414 (47%), Gaps = 80/414 (19%)

Query: 108 DLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWN 167
           D+K+L   KK+H++I        +  LG KL+  +  CG+    R+VF+++ +  V  +N
Sbjct: 33  DIKTL---KKLHTMIFYLN-SHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYN 88

Query: 168 LLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-------------------- 207
           +++  Y     + + L +F++M + G   D+YT+ CVLK                     
Sbjct: 89  VMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKV 148

Query: 208 ------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                       +A+ G    + +A ++FDE+  +DVVSWN M++GY  N   +  LE+ 
Sbjct: 149 GLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEIC 208

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
           +EM + G   D  TM +++   AN                       S  N L       
Sbjct: 209 REMEDYGQKPDGCTMASLMPAVAN----------------------TSSENVLY------ 240

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
                  ++F  +  ++++SW  MI  Y +  +   A+ L+  M +  +EPD     S+L
Sbjct: 241 -----VEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVL 295

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            AC     L +G+ +H+Y+++  +  +L + N+L+DMYA+CG + DA+ VF++M  +D+ 
Sbjct: 296 PACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVA 355

Query: 436 SWNTMI----------GALDLFVAMLQNFE-PDGVTMACILPACASLAALERGR 478
           SW ++I           A+ LF  ML + + PD +    IL AC+    L+ GR
Sbjct: 356 SWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGR 409



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 8/162 (4%)

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           +++H  I       + ++   ++  Y  CG   L R +FD +  ++++ + +MI  Y  +
Sbjct: 38  KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNN 97

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR---YECNIEPK 594
               D +  F +M   G  PD  ++  VL ACS S    E  R+  ++     +  ++  
Sbjct: 98  HRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCS----ENLRYGLLIHGDVLKVGLDFN 153

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           L     ++ +  + G L EA R  + M +  D   W S++ G
Sbjct: 154 LFVGNGLIAMYGKCGCLFEARRVFDEM-IWKDVVSWNSMVAG 194


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 280/815 (34%), Positives = 422/815 (51%), Gaps = 81/815 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+ ++L  C+    + +G+ +H  I  S     D ++G+ L+ M+  C  L + R V
Sbjct: 6   DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFE-RDTMVGNALISMYGKCDSLVDARSV 64

Query: 155 FNKID--NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           F  +D     V  WN ++  Y++ G+  E+L L+ +M   G+  D  TF  VL   + + 
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124

Query: 213 NSRR-----------------------------VKDAHKLFDELSDRDVVSWNCMISGYI 243
             R                              V DA ++F  L  RD  SWN +I  + 
Sbjct: 125 QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHS 184

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            +G     L +FKEM       +  T + V+SG +    L  GR +HA  +   F  ++ 
Sbjct: 185 QSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLV 243

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               L++MY KCG    A  VF+KM +R +VSW  MI  Y   G F  A+ L++ +  EG
Sbjct: 244 VATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEG 303

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
            +       SIL AC+    L  G+ VH +I E  + S + V+ AL++MYAKCGS+ +A 
Sbjct: 304 FKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEAR 363

Query: 424 SVFNQMPVKDIVSWNTMIGALD----------------------------LFVAMLQN-- 453
            VFN M  +D V+W+T+IGA                              +    +QN  
Sbjct: 364 KVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGC 423

Query: 454 ----------------FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                            +PD VT   +L ACASL  L   + +H  I    + ++  V N
Sbjct: 424 AVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTN 483

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
            +++MY +CG L  A  LF     K ++SWT M+A +  +G   +A+  F +M   G++P
Sbjct: 484 TLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKP 543

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           D+V++ S+L+ C+H G +++GWR+F  M     + P  +H+A MVDLL R+G L +A   
Sbjct: 544 DDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKEL 603

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           +E MP  PD   W + L  CRIH +++L E  AE V+EL+P +T  Y+ ++N+YA    W
Sbjct: 604 LESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMW 663

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
           E+V  +R+K+  RGLKK PG S+IE+ GK++ F +GG  HP   +I   L RL   M+  
Sbjct: 664 EKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAA 723

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL-NLPAGQTIRVTKNLRVCGDCHEM 796
           GY P T+  L +  E EKE  L  HSEK+A+AFG++ +  +G+ IRV KNLRVC DCH  
Sbjct: 724 GYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTA 783

Query: 797 AKFMSKTARREIVLRDSNRFHHF-KDGRCSCRGFW 830
            KF+++ A R+I++RD NRFH F  DG+CSC  +W
Sbjct: 784 TKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 211/449 (46%), Gaps = 71/449 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSE-KSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           ++NA I    + G+   A+ +    +   K ++ TY +++   +  + L +G+K+H+ I 
Sbjct: 175 SWNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIV 234

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            +G   D  V+ + L+ M+  CG   E R VF+K+    +  WN+++  Y   G+F E+L
Sbjct: 235 ANGFDTDL-VVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEAL 293

Query: 184 YLFKKMQSLGIAADSYTFSCVL-KCLAV--VGNSRRV----------------------- 217
            L++K+   G      TF  +L  C +V  +   R V                       
Sbjct: 294 ELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMY 353

Query: 218 ------KDAHKLFDELSDRDVV----------------------------------SWNC 237
                 ++A K+F+ + +RD V                                  SWN 
Sbjct: 354 AKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNA 413

Query: 238 MISGYIANGVAEKGLEVFKEMLN-LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
           MI+ Y+ NG A   +++F+EM    G   D  T + VL  CA+ G L   +A+HA   ++
Sbjct: 414 MITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISES 473

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
                +   NTL++MY++CG L+ A R+F    E++VVSWT+M+A +++ G +  A+ LF
Sbjct: 474 ELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLF 533

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAK 415
           + M  EG++PD    TSIL  C   G LE G +   D  + + +  +     A++D+  +
Sbjct: 534 QEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGR 593

Query: 416 CGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            G + DA+ +   MP + D V+W T + A
Sbjct: 594 SGRLFDAKELLESMPFEPDPVAWMTFLTA 622



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 151/303 (49%), Gaps = 25/303 (8%)

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           +PD     ++L +C+  G +  G+ +H+ I+ +  +    V NAL+ MY KC S+ DA S
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 425 VFNQMP--VKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
           VF  M    +++VSWN MI           AL L+  M LQ    D VT   +L AC+SL
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           A   +GREIH  +   G+ + +++ANA+V MY + G +  A+ +F  +  +D  SW  +I
Sbjct: 124 A---QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
             +   G    A+  F +M+   ++P+  ++I+V+   S   ++ EG R  +        
Sbjct: 181 LAHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEG-RKIHAEIVANGF 238

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI-----HHEVKLA 646
           +  L     ++++  + G+  EA    + M    D   W +++ GC +     H  ++L 
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMK-KRDMVSW-NVMIGCYVLNGDFHEALELY 296

Query: 647 EKV 649
           +K+
Sbjct: 297 QKL 299



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 13/278 (4%)

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
           +PD VT   +L +C+S   +  GR +H  I       D  V NA++ MY KC  LV ARS
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 515 LFDMIP--AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           +F+ +    ++++SW  MIA Y  +G   +A+  +  M   G+  D V+F+SVL ACS  
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
             + +G    N + Y   ++        +V + +R G++ +A R  + +    D T W +
Sbjct: 123 --LAQGREIHNRVFYS-GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQT-RDETSWNA 178

Query: 633 LLCGCRIHHEVKLAEKV-AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           ++       +   A ++  E   +++P++T Y  +++  ++  E   E +K+  +I   G
Sbjct: 179 VILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISG-FSTPEVLPEGRKIHAEIVANG 237

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
              +     +     +N++   GSSH   +  + + KR
Sbjct: 238 FDTD----LVVATALINMYGKCGSSHEAREVFDKMKKR 271


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/584 (44%), Positives = 362/584 (61%), Gaps = 17/584 (2%)

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
           N    T   ++  CA   +L +G  VH   + + F ++      L++MY + G +D A++
Sbjct: 75  NPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALK 134

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF++  ER++  W ++    A  G     + L+  M   G   D +  T +L AC    L
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSEL 194

Query: 384 ----LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               L  GK++H +I  +  +++++V   L+D+YAK GS++ A SVF  MP K+ VSW+ 
Sbjct: 195 SVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSA 254

Query: 440 MIG----------ALDLFVAMLQ---NFEPDGVTMACILPACASLAALERGREIHGYILR 486
           MI           AL+LF  M+    N  P+ VTM  +L ACA LAALE+G+ IHGYILR
Sbjct: 255 MIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILR 314

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
             + +   V NA++ MY +CG +++ + +FD +  +D++SW  +I+ YGMHGFG  AI  
Sbjct: 315 RQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQI 374

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
           F +M   G+ P  +SFI+VL ACSH+GLV+EG   F  M  +  I P +EHYACMVDLL 
Sbjct: 375 FENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 434

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVL 666
           R   L EA + IE M   P  T+WGSLL  CRIH  V+LAE+ +  +FELEP N G YVL
Sbjct: 435 RANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVL 494

Query: 667 LANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESL 726
           LA++YAEA+ W E K + + +  RGL+K PGCSWIE+K KV  FV+    +P  ++I +L
Sbjct: 495 LADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHAL 554

Query: 727 LKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKN 786
           L +L  EMK +GY P+T   L + DE EKE  + GHSEKLA+AFG++N   G+TIR+ KN
Sbjct: 555 LVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKN 614

Query: 787 LRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LR+C DCH + KF+SK A REI++RD NRFHHF+DG CSC  +W
Sbjct: 615 LRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 212/460 (46%), Gaps = 44/460 (9%)

Query: 25  KFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCK-TKNYNAEIGRFCEVGNLEKAM 83
           +F  + PS   +  +S   S   ++ +S + S  L+     N N  I   C+ GNL++A+
Sbjct: 8   QFVRHVPSQSHLCYTSHVSSRVPVSFVSLNPSANLINDINSNNNQLIQSLCKGGNLKQAL 67

Query: 84  EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFV 143
            +L          +T+  ++  CA   SL  G  VH  + +SG    D  L +KL+ M+ 
Sbjct: 68  HLLCCEPNPT--QQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGF-DQDPFLATKLINMYY 124

Query: 144 TCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
             G +    +VF++     +++WN L    +  G+ KE L L+ +M  +G  +D +T++ 
Sbjct: 125 ELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTY 184

Query: 204 VLKCLAV----VGNSRRVKDAH--------------------------------KLFDEL 227
           VLK   V    V   R+ K+ H                                 +F  +
Sbjct: 185 VLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAM 244

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN--VDLATMVTVLSGCANCGALMF 285
             ++ VSW+ MI+ +  N +  K LE+F+ M+    N   +  TMV +L  CA   AL  
Sbjct: 245 PTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQ 304

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ +H + L+      +   N L+ MY +CG++    RVF+ M +R VVSW S+I+ Y  
Sbjct: 305 GKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGM 364

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD-YIKENDMQSSLY 404
            G    AI++F  M+ +G+ P   +  ++L AC+  GL+E GK + +  + +  +   + 
Sbjct: 365 HGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGME 424

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKD-IVSWNTMIGA 443
               ++D+  +   + +A  +   M  +     W +++G+
Sbjct: 425 HYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGS 464



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 168/350 (48%), Gaps = 20/350 (5%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G+LK+   +     N     +  L++  ++  +    L + + +   G   D +  + ++
Sbjct: 61  GNLKQALHLLCCEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLI 120

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                +G+  R   A K+FDE  +R +  WN +       G  ++ L+++ +M  +G   
Sbjct: 121 NMYYELGSIDR---ALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPS 177

Query: 266 DLATMVTVLSGCA----NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           D  T   VL  C     +   L  G+ +HA  L+  +   I    TLLD+Y+K G +  A
Sbjct: 178 DRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYA 237

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVYAITSILHACA 379
             VF  M  ++ VSW++MIA +A+  +   A+ LF+ M+ E     P+   + ++L ACA
Sbjct: 238 NSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACA 297

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               LE GK +H YI    + S L V NAL+ MY +CG +   + VF+ M  +D+VSWN+
Sbjct: 298 GLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNS 357

Query: 440 MIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGR 478
           +I           A+ +F  M+ Q   P  ++   +L AC+    +E G+
Sbjct: 358 LISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGK 407


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 275/778 (35%), Positives = 422/778 (54%), Gaps = 48/778 (6%)

Query: 100 CSILQLCADLKSLED---GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           C+   L   LK + D   G +VH++   +G    D  + + LV M+   G + + RRVF+
Sbjct: 8   CNEFALPVVLKCVPDAQLGAQVHAMAMATGFG-SDVFVANALVAMYGGFGFMDDARRVFD 66

Query: 157 KIDNGKVFI-WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-------- 207
           +  + +  + WN LM  Y K     +++ +F +M   GI    + FSCV+          
Sbjct: 67  EAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNID 126

Query: 208 --------LAVVGNSR----------------RVKDAHKLFDELSDRDVVSWNCMISGYI 243
                   +  +G  +                RV  A  +F+++ D DVVSWN +ISG +
Sbjct: 127 AGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCV 186

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            NG   + +E+  +M + G   ++  + ++L  CA  GA   GR +H F +KA    +  
Sbjct: 187 LNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY 246

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               L+DMY+K   LD A++VF+ M  R ++ W ++I+G +  G  D A  +F G+ +EG
Sbjct: 247 IGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEG 306

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           +  +   + ++L + A        + VH   ++       +V N L+D Y KC  ++DA 
Sbjct: 307 LGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAI 366

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVTMACILPACASLA 472
            VF +    DI++  +MI          GA+ LF+ ML +  EPD   ++ +L ACASL+
Sbjct: 367 RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 426

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           A E+G+++H ++++    +D    NA+V  Y KCG +  A   F  +P + ++SW+ MI 
Sbjct: 427 AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIG 486

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           G   HG G  A+  F  M   GI P+ ++  SVL AC+H+GLVDE  R+FN M+    I+
Sbjct: 487 GLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGID 546

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
              EHY+CM+DLL R G L +A   +  MP   +A++WG+LL   R+H + +L +  AE 
Sbjct: 547 RTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEK 606

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           +F LEP+ +G +VLLAN YA +  W EV K+R+ +    +KK P  SW+E+K KV+ F+ 
Sbjct: 607 LFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIV 666

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  SHP  K+I S L  L   M + GY P     L + D  EKE+ L  HSE+LA+AF +
Sbjct: 667 GDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFAL 726

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           L+ P G  IRV KNLR+C DCH   KF+S    REI++RD NRFHHF+DG CSC  +W
Sbjct: 727 LSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 229/484 (47%), Gaps = 46/484 (9%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           +  ++  C   ++++ G++VH+++   G    D    + LV M+V  G +     +F K+
Sbjct: 112 FSCVVNACTGSRNIDAGRQVHAMVVRMGYE-KDVFTANALVDMYVKMGRVDIASVIFEKM 170

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------ 212
            +  V  WN L+      G+   ++ L  +M+S G+  + +  S +LK  A  G      
Sbjct: 171 PDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGR 230

Query: 213 --------------------------NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                                      +  + DA K+FD +S RD++ WN +ISG    G
Sbjct: 231 QIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGG 290

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
             ++   +F  +   G  V+  T+  VL   A+  A    R VHA A K  F  +    N
Sbjct: 291 RHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVN 350

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L+D Y KC  L  AIRVFE+     +++ TSMI   ++    +GAI+LF  M+R+G+EP
Sbjct: 351 GLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEP 410

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D + ++S+L+ACA     E GK VH ++ +    S  +  NAL+  YAKCGS+ DAE  F
Sbjct: 411 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 470

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALE 475
           + +P + +VSW+ MIG          AL+LF  M+ +   P+ +TM  +L AC     ++
Sbjct: 471 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 530

Query: 476 RGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAG 533
             +     +    GI       + ++D+  + G L  A  L + +P +   S W  ++  
Sbjct: 531 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 590

Query: 534 YGMH 537
             +H
Sbjct: 591 SRVH 594



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 197/417 (47%), Gaps = 41/417 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSII 122
           ++NA I      G+  +A+E+L   + S +    +   SIL+ CA   + + G+++H  +
Sbjct: 177 SWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 236

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++    DD  +G  LV M+     L +  +VF+ + +  + +WN L+   S  G   E+
Sbjct: 237 IKANADSDD-YIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 295

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSRRVK----------DAH-------- 221
             +F  ++  G+  +  T + VLK    L     +R+V           DAH        
Sbjct: 296 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 355

Query: 222 -----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                      ++F+E S  D+++   MI+        E  +++F EML  G   D   +
Sbjct: 356 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 415

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++L+ CA+  A   G+ VHA  +K  F  +    N L+  Y+KCG ++ A   F  + E
Sbjct: 416 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 475

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R VVSW++MI G A+ G    A+ LF  MV EGI P+   +TS+L AC   GL++  K  
Sbjct: 476 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 535

Query: 391 HDYIKEN---DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +KE    D     Y  + ++D+  + G + DA  + N MP +   S W  ++GA
Sbjct: 536 FNSMKEMFGIDRTEEHY--SCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 590



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 145/291 (49%), Gaps = 17/291 (5%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M  EG+  + +A+  +L  C  D   ++G  VH         S ++V+NAL+ MY   G 
Sbjct: 1   MRAEGVCCNEFALPVVL-KCVPDA--QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57

Query: 419 MADAESVFNQM-PVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILP 466
           M DA  VF++    ++ VSWN ++           A+ +F  M+    +P     +C++ 
Sbjct: 58  MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
           AC     ++ GR++H  ++R G   D   ANA+VDMYVK G + +A  +F+ +P  D++S
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           W  +I+G  ++G    AI     M+ +G+ P+     S+L AC+ +G  D G +    M 
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM- 236

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
            + N +        +VD+ ++   L +A +  + M    D  +W +L+ GC
Sbjct: 237 IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS-HRDLILWNALISGC 286


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 263/653 (40%), Positives = 373/653 (57%), Gaps = 42/653 (6%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +FD +   +   WN MI GY   G     + ++ EML  G   D  T   +L     
Sbjct: 72  ARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTR 131

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             A+  GR +H   +K  FS  +   N L+ +YS  G++  A  VF++  +  VV+W  M
Sbjct: 132 DTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVM 191

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I+GY R   FD +++LF  M R  + P    + S+L AC+    L +GK VH Y+K+  +
Sbjct: 192 ISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKI 251

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFN-------------------------------Q 428
           +    + NAL+DMYA CG M  A  +F+                               +
Sbjct: 252 EPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDK 311

Query: 429 MPVKDIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERG 477
           MP +D VSW  MI            L LF  M   N +PD  TM  IL ACA L ALE G
Sbjct: 312 MPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELG 371

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
             I  YI ++ I  D  V NA++DMY  CG +  A  +F+ +P +D ISWT +I G  ++
Sbjct: 372 EWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAIN 431

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G+G +A+  F+ M +A I PDEV+ I VL AC+HSG+VD+G +FF  M  +  IEP + H
Sbjct: 432 GYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAH 491

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           Y CMVDLL R G+L EA+  I+ MPV P++ +WGSLL  CR+H + ++AE  A+ + ELE
Sbjct: 492 YGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELE 551

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           P+N   YVLL N+YA   +WE++ ++R+ +  RG+KK PGCS IE+ G V+ FVAG   H
Sbjct: 552 PENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVH 611

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
           P +K+I S L  + +++K  GY P T    ++  E EKE A+  HSEKLA+AFG+++   
Sbjct: 612 PQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGP 671

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G TIR+ KNLR+C DCH +AK +SK   RE+++RD  RFHHF+ G CSC+ +W
Sbjct: 672 GVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/512 (28%), Positives = 234/512 (45%), Gaps = 77/512 (15%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFV-TCGDLKEGRRVFNKIDNG 161
           L L    KS+   K++HS    +G++ +  V    + F      GD++  R VF+ +   
Sbjct: 23  LSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGP 82

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA---VVGNSRRVK 218
             F+WN ++  YS+ G    ++ ++ +M   G+  D YT+  +LK       V   R + 
Sbjct: 83  NHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELH 142

Query: 219 D-----------------------------AHKLFDELSDRDVVSWNCMISGYIANGVAE 249
           D                             A  +FD  S  DVV+WN MISGY  +   +
Sbjct: 143 DHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFD 202

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + +++F EM  +       T+V+VLS C+    L  G+ VH +             N L+
Sbjct: 203 ESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALI 262

Query: 310 DMYSKCGDLDGAIRV-------------------------------FEKMGERSVVSWTS 338
           DMY+ CGD+D A+ +                               F+KM ER  VSWT+
Sbjct: 263 DMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTA 322

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           MI GY +   F   + LFR M    I+PD + + SIL ACA  G LE+G+ +  YI +N+
Sbjct: 323 MIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNE 382

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFV 448
           ++   +V NAL+DMY  CG++  A  +FN MP +D +SW  +I           ALD+F 
Sbjct: 383 IKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFS 442

Query: 449 AMLQ-NFEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKC 506
            ML+ +  PD VT   +L AC     +++G++    +  +HGI  +      +VD+  + 
Sbjct: 443 QMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRA 502

Query: 507 GVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           G L  A  +   +P K + I W  ++    +H
Sbjct: 503 GHLKEAHEVIKNMPVKPNSIVWGSLLGACRVH 534



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 195/430 (45%), Gaps = 54/430 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N  I  +      +++M++    E+ ++   + T  S+L  C+ LK L  GK+VH  +
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYV 246

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +  I     VL + L+ M+  CGD+     +F+ + +  V  W  ++  ++  G     
Sbjct: 247 KDLKIE-PVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLG----- 300

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                            +V  A   FD++ +RD VSW  MI GY
Sbjct: 301 ---------------------------------QVGLARNYFDKMPERDFVSWTAMIDGY 327

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           +     ++ L +F+EM       D  TMV++L+ CA+ GAL  G  + A+  K     + 
Sbjct: 328 LQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDS 387

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              N L+DMY  CG+++ AIR+F  M  R  +SWT++I G A  G  + A+ +F  M++ 
Sbjct: 388 FVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKA 447

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMAD 421
            I PD      +L AC   G+++ GK     +  ++ ++ ++     ++D+  + G + +
Sbjct: 448 SITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKE 507

Query: 422 AESVFNQMPVK-DIVSWNTMIGA---------LDLFVAMLQNFEPDGVTMACILPACASL 471
           A  V   MPVK + + W +++GA          ++    +   EP+   +  +L  C   
Sbjct: 508 AHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLL--CNIY 565

Query: 472 AALERGREIH 481
           AA  R  ++H
Sbjct: 566 AACNRWEKLH 575



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 5/105 (4%)

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK--CGVLVLARSLFDMIPA 521
           ++  C S+A L   ++IH   +  G+ ++  V   I+    K   G +  AR +FD +P 
Sbjct: 25  LIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPG 81

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
            +   W  MI GY   G    A++ + +M + G+ PDE ++  +L
Sbjct: 82  PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 277/784 (35%), Positives = 435/784 (55%), Gaps = 51/784 (6%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           ++D   + S+L++ A L     G+++H    + G  +DD  +G+ LV  ++   + K+GR
Sbjct: 90  EMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGF-LDDVSVGTSLVDTYMKGSNFKDGR 148

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           +VF+++    V  W  L+  Y++     E L LF +MQ+ G   +S+TF+  L  LA  G
Sbjct: 149 KVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208

Query: 213 NSRR--------------------------------VKDAHKLFDELSDRDVVSWNCMIS 240
              R                                V+ A  LFD+   + VV+WN MIS
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY ANG+  + L +F  M      +  ++  +V+  CAN   L F   +H   +K  F  
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
           + +    L+  YSKC  +  A+R+F+++G   +VVSWT+MI+G+ +    + A+ LF  M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
            R+G+ P+ +  + IL A       E    VH  + + + + S  V  AL+D Y K G +
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKV 444

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPAC 468
            +A  VF+ +  KDIV+W+ M+           A+ +F  + +   +P+  T + IL  C
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504

Query: 469 ASL-AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           A+  A++ +G++ HG+ ++  + +   V++A++ MY K G +  A  +F     KDL+SW
Sbjct: 505 AATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSW 564

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
             MI+GY  HG    A+  F +M++  ++ D V+FI V  AC+H+GLV+EG ++F++M  
Sbjct: 565 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 624

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
           +C I P  EH +CMVDL SR G L +A + IE MP    +TIW ++L  CR+H + +L  
Sbjct: 625 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGR 684

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
             AE +  ++P+++  YVLL+N+YAE+  W+E  K+R+ ++ R +KK PG SWIE+K K 
Sbjct: 685 LAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKT 744

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
             F+AG  SHP   +I   L+ L   +K  GY P T Y L + D+  KE  L  HSE+LA
Sbjct: 745 YSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLA 804

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF-KDGRCSC 826
           +AFG++  P G  + + KNLRVCGDCH + K ++K   REIV+RDSNRFHHF  DG CSC
Sbjct: 805 IAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSC 864

Query: 827 RGFW 830
             FW
Sbjct: 865 GDFW 868



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 234/462 (50%), Gaps = 33/462 (7%)

Query: 207 CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
           C   V +SR + +AH LFD+   RD  S+  ++ G+  +G  ++   +F  +  LG  +D
Sbjct: 34  CFGTVSSSR-LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMD 92

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
            +   +VL   A     +FGR +H   +K  F  ++S   +L+D Y K  +     +VF+
Sbjct: 93  CSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD 152

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
           +M ER+VV+WT++I+GYAR  + D  + LF  M  EG +P+ +   + L   A +G+   
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
           G  VH  + +N +  ++ VSN+L+++Y KCG++  A  +F++  VK +V+WN+MI     
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272

Query: 443 ------ALDLFVAMLQNF-EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 AL +F +M  N+      + A ++  CA+L  L    ++H  ++++G   D+N+
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
             A++  Y KC  ++ A  LF  I    +++SWT MI+G+  +    +A+  F++M++ G
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392

Query: 555 IEPDEVSFISVLYACS-------HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
           + P+E ++  +L A         H+ +V            + N E        ++D   +
Sbjct: 393 VRPNEFTYSVILTALPVISPSEVHAQVV------------KTNYERSSTVGTALLDAYVK 440

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            G + EA +    +    D   W ++L G     E + A K+
Sbjct: 441 LGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETEAAIKM 481


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 258/632 (40%), Positives = 381/632 (60%), Gaps = 24/632 (3%)

Query: 223 LFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           +F +  D+  V SWN +I+ +  +G + + L  F  M  L  + + +T    +  C++  
Sbjct: 41  MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            L  G+ +H  A    +  +I   + L+DMYSKCG L+ A ++F+++ ER+VVSWTSMI+
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMIS 160

Query: 342 GYAREGVFDGAIRLFRGMV-----------REGIEPDVYAITSILHACACDGLLEIGKDV 390
           GY +      A+ LF+  +             G+  D   +  ++ ACA   +  + + V
Sbjct: 161 GYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECV 220

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H    +   +  L V N LMD YAKCG ++ +  VF+ M   D+ SWN++I         
Sbjct: 221 HGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLS 280

Query: 443 --ALDLFVAMLQNFEP--DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
             A  LF  M++  E   + VT++ +L ACA   AL+ G+ IH  +++  +  +  V  +
Sbjct: 281 VEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTS 340

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           IVDMY KCG + +AR  FD +  K++ SWT+M+AGYGMHG G +A+  F +M + GI+P+
Sbjct: 341 IVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPN 400

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            ++F+SVL ACSH+GL+ EGW +FN M+ E ++EP +EHY+CMVDLL R G L EAY  I
Sbjct: 401 YITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLI 460

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           + M V PD  +WGSLL  CRIH  V+L E  A  +F+L+P N GYYVLL+N+YA+A +W+
Sbjct: 461 QEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWD 520

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           +V+++R  +   GL K PG S +E KG+V++F+ G   HP  +KI   L  L ++++  G
Sbjct: 521 DVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVG 580

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
           Y P     L + D  EK + L  HSEKLA+AFGI+N   G  I++ KNLR+CGDCH   K
Sbjct: 581 YMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIK 640

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +SK   REIV+RDS RFHHFKDG CSC  +W
Sbjct: 641 LISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 214/444 (48%), Gaps = 58/444 (13%)

Query: 152 RRVFNK-IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA- 209
           R +F K +D   V+ WN ++ +++++G+  ++LY F  M+ L +  +  TF C +K  + 
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 210 ---------------VVGNSRRV----------------KDAHKLFDELSDRDVVSWNCM 238
                          V G    +                 DA KLFDE+ +R+VVSW  M
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158

Query: 239 ISGYIANGVAEKGLEVFKEML-----------NLGFNVDLATMVTVLSGCANCGALMFGR 287
           ISGY+ N  A + + +FKE L            +G  VD   +  V+S CA         
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            VH  A+K  F   ++  NTL+D Y+KCG++  + +VF+ M E  V SW S+IA YA+ G
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278

Query: 348 VFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           +   A  LF  MV+ G +  +   ++++L ACA  G L+IGK +HD + + +++ +L V 
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVG 338

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFE 455
            +++DMY KCG +  A   F+++  K++ SW  M+           A+ +F  M++   +
Sbjct: 339 TSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIK 398

Query: 456 PDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARS 514
           P+ +T   +L AC+    L+ G      +     +       + +VD+  + G L  A  
Sbjct: 399 PNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYG 458

Query: 515 LFDMIPAK-DLISWTIMIAGYGMH 537
           L   +  K D I W  ++    +H
Sbjct: 459 LIQEMKVKPDFIVWGSLLGACRIH 482



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 85/171 (49%), Gaps = 9/171 (5%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + +  T  ++L  CA   +L+ GK +H  + +  +  D+ V+G+ +V M+  CG ++  R
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELE-DNLVVGTSIVDMYCKCGRVEMAR 355

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           + F+++    V  W +++  Y   G+ KE++ +F +M   GI  +  TF  V   LA   
Sbjct: 356 KAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSV---LAACS 412

Query: 213 NSRRVKDAHKLFDELS-----DRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
           ++  +K+    F+++      +  +  ++CM+      G  ++   + +EM
Sbjct: 413 HAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEM 463


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 294/869 (33%), Positives = 458/869 (52%), Gaps = 76/869 (8%)

Query: 32  STLPIIVSSKSHSSCTINPISASISKTLVCKT----------------------KNYNAE 69
           ST PI+   +    C  NP+  S    L  +T                      K +N  
Sbjct: 14  STNPILRIRRYQLHCHANPLLQSHVVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQL 73

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           + R+      ++A+ +  S  +S +  D+ T   +L +CA   +   G++VH    + G+
Sbjct: 74  LFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGL 133

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY-LF 186
           V    V G+ LV M+   G++++GRRVF+++ +  V  WN L+  YS    F + ++ LF
Sbjct: 134 VHHLSV-GNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYS-WNRFNDQVWELF 191

Query: 187 KKMQSLGIAADSYTFSCVLKCLA--------------------------------VVGNS 214
             MQ  G   D YT S V+  LA                                ++  S
Sbjct: 192 CLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKS 251

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             ++DA  +FD + ++D VSWN MI+G++ NG   +  E F  M   G     AT  +V+
Sbjct: 252 GMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVI 311

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSV 333
             CA+   L   R +H   LK+  S   +    L+   +KC ++D A  +F  M G +SV
Sbjct: 312 KSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSV 371

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSWT+MI+GY + G  D A+ LF  M REG++P+ +  ++IL       + EI  +V   
Sbjct: 372 VSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEV--- 428

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           IK N  +SS  V  AL+D + K G+++DA  VF  +  KD+++W+ M+           A
Sbjct: 429 IKTNYEKSS-SVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEA 487

Query: 444 LDLFVAML-QNFEPDGVTMACILPAC-ASLAALERGREIHGYILRHGISADRNVANAIVD 501
             +F  +  +  +P+  T   I+ AC A  A++E+G++ H Y ++  ++    V++++V 
Sbjct: 488 AKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVT 547

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           +Y K G +  A  +F     +DL+SW  MI+GY  HG    A+  F +M++  +E D ++
Sbjct: 548 LYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAIT 607

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           FI V+ AC+H+GLV +G  +FN+M  + +I P +EHY+CM+DL SR G L +A   I  M
Sbjct: 608 FIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGM 667

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P  P AT+W  +L   R+H  ++L +  AE +  LEP ++  YVLL+N+YA A  W E  
Sbjct: 668 PFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKV 727

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
            +R+ + +R +KK PG SWIE+K K   F+AG  SHP +  I S L  L   ++  GY P
Sbjct: 728 NVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQP 787

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            T Y   + ++ +KE  L  HSE+LA+AFG++       +++ KNLRVCGDCH   K +S
Sbjct: 788 DTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVS 847

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              +R IV+RDSNRFHHFK G CSC  +W
Sbjct: 848 LVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/689 (38%), Positives = 383/689 (55%), Gaps = 81/689 (11%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           L   L    + S++ +I  +  +      L  F  +  L    D   + + +  CA+  A
Sbjct: 60  LSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRA 119

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G+ +HAFA  + F  +    ++L  MY KC  +  A ++F++M +R VV W++MIAG
Sbjct: 120 LDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAG 179

Query: 343 YAR-----------------------------------EGVFDGAIRLFRGMVREGIEPD 367
           Y+R                                    G +D A+ +FR M+ +G  PD
Sbjct: 180 YSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPD 239

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
              ++ +L A  C   + +G  VH Y+ +  + S  +V +A++DMY KCG + +   VF+
Sbjct: 240 GSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFD 299

Query: 428 QM-----------------------------PVKD------IVSWNTMIG---------- 442
           ++                               KD      +V+W ++I           
Sbjct: 300 EVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLE 359

Query: 443 ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           AL+LF  M     EP+ VT+  ++PAC +++AL  G+EIH + LR GI  D  V +A++D
Sbjct: 360 ALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALID 419

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KCG + LAR  FD + A +L+SW  ++ GY MHG   + +  F+ M Q+G +PD V+
Sbjct: 420 MYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVT 479

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           F  VL AC+ +GL +EGWR +N M  E  IEPK+EHYAC+V LLSR G L EAY  I+ M
Sbjct: 480 FTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEM 539

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P  PDA +WG+LL  CR+H+ + L E  AE +F LEP N G Y+LL+N+YA    W+E  
Sbjct: 540 PFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEEN 599

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           ++RE +  +GL+KNPG SWIE+  KV++ +AG  SHP  K I   L +L ++MK+ GY P
Sbjct: 600 RIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLP 659

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
           KT + L + +E +KE  LCGHSEKLA+  G+LN   GQ ++V KNLR+C DCH + K +S
Sbjct: 660 KTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVIS 719

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +   REI +RD+NRFHHFKDG CSC  FW
Sbjct: 720 RLEGREIYVRDTNRFHHFKDGVCSCGDFW 748



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 142/535 (26%), Positives = 242/535 (45%), Gaps = 86/535 (16%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S ++ CA L++L+ G+++H+    SG  + D ++ S L  M++ C  + + R++F+++ +
Sbjct: 109 SAIKSCASLRALDPGQQLHAFAAASGF-LTDSIVASSLTHMYLKCDRILDARKLFDRMPD 167

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
             V +W+ ++  YS+ G  +E+  LF +M+S G+                          
Sbjct: 168 RDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGV-------------------------- 201

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
                   + ++VSWN M++G+  NG  ++ + +F+ ML  GF  D +T+  VL      
Sbjct: 202 --------EPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCL 253

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC------------------------- 315
             ++ G  VH + +K     +    + +LDMY KC                         
Sbjct: 254 EDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFL 313

Query: 316 ------GDLDGAIRVFEKMGER----SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
                 G +D A+ VF K  ++    +VV+WTS+IA  ++ G    A+ LFR M   G+E
Sbjct: 314 TGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVE 373

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P+   I S++ AC     L  GK++H +     +   +YV +AL+DMYAKCG +  A   
Sbjct: 374 PNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRC 433

Query: 426 FNQMPVKDIVSWNTMIGA----------LDLFVAMLQNFE-PDGVTMACILPACASLAAL 474
           F++M   ++VSWN ++            +++F  MLQ+ + PD VT  C+L ACA     
Sbjct: 434 FDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLT 493

Query: 475 ERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIA 532
           E G R  +     HGI         +V +  + G L  A S+   +P   D   W  +++
Sbjct: 494 EEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLS 553

Query: 533 GYGMH-GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
              +H       IA           P     +S +YA    GL DE  R   +M+
Sbjct: 554 SCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYAS--KGLWDEENRIREVMK 606



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 176/394 (44%), Gaps = 55/394 (13%)

Query: 270 MVTVLSGC--ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG---AIRV 324
           M   LS C  ++  +L   R  HA  L+     +     +LL  Y+    L     ++ +
Sbjct: 1   MFHALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTL 60

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
              +   ++ S++S+I  +AR   F   +  F  +    + PD + + S + +CA    L
Sbjct: 61  SSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRAL 120

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
           + G+ +H +   +   +   V+++L  MY KC  + DA  +F++MP +D+V W+ MI   
Sbjct: 121 DPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGY 180

Query: 443 -------------------------------------------ALDLFVAML-QNFEPDG 458
                                                      A+ +F  ML Q F PDG
Sbjct: 181 SRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDG 240

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
            T++C+LPA   L  +  G ++HGY+++ G+ +D+ V +A++DMY KCG +     +FD 
Sbjct: 241 STVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDE 300

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +   ++ S    + G   +G    A+  FN  +   +E + V++ S++ +CS +G   E 
Sbjct: 301 VEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEA 360

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
              F  M+    +EP   +   +  L+   GN+S
Sbjct: 361 LELFRDMQ-AYGVEP---NAVTIPSLIPACGNIS 390



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 17/243 (6%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  S++  C ++ +L  GK++H      GI  DD  +GS L+ M+  CG ++  RR F+K
Sbjct: 378 TIPSLIPACGNISALMHGKEIHCFSLRRGI-FDDVYVGSALIDMYAKCGRIQLARRCFDK 436

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +    +  WN +M  Y+  G  KE++ +F  M   G   D  TF+CVL   A  G     
Sbjct: 437 MSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNG---LT 493

Query: 218 KDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           ++  + ++ +S+   +      + C+++     G  E+   + KEM    F  D      
Sbjct: 494 EEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEM---PFEPDACVWGA 550

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL--DMYSKCGDLDGAIRVFEKMGE 330
           +LS C     L  G      A K  F +  +  N +L  ++Y+  G  D   R+ E M  
Sbjct: 551 LLSSCRVHNNLSLGEIA---AEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKS 607

Query: 331 RSV 333
           + +
Sbjct: 608 KGL 610


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 272/817 (33%), Positives = 437/817 (53%), Gaps = 52/817 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A +  + + G   +A+E L    +E  K +  T+ +I+ +CA L+ L+ G+K+H  I
Sbjct: 126 SWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRI 185

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G+   DG+LG+ LV M+ +CG   + + VF+++    V +W  ++   S+ G ++E 
Sbjct: 186 INEGLE-PDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEG 244

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC--------------------------------LAV 210
           L +F+KM   G+ A+  T+  +++                                 +++
Sbjct: 245 LLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISL 304

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
            G    +  A  L + +  RDVV+WN M++    NG   + + + + M   GF  +  T 
Sbjct: 305 YGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTY 364

Query: 271 VTVLSGCANCGALMFGRAVHAFALK-ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           ++VL  CAN  AL  GR +HA  L      +E++  N+++ MY KCG  + A+ VFE M 
Sbjct: 365 LSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMP 424

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            +  VSW ++I        F  A+ LF GM  EG+  + + + S+L AC     L++ + 
Sbjct: 425 RKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQ 484

Query: 390 VHDYIKENDMQ-SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----- 443
           +H          +S  V N++++MYA+CGS+ DA+  F+ +  K +V+W+ ++ A     
Sbjct: 485 IHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSK 544

Query: 444 -------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHG-ISADRN 494
                     F  M  +  +P  VT    L ACA++A LE GR +H      G +     
Sbjct: 545 DGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLV 604

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           + N I++MY KCG    A+ +FD +P K LISW  +I  Y  +G   +A+++  +M   G
Sbjct: 605 LGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQG 664

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
            +PD  + +S+LY  SH+GL++ G   F     +  +EP      C+VDLL+R G L  A
Sbjct: 665 FDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAA 724

Query: 615 YRFIEMMPVAPDATI-WGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
              I   P     TI W +LL  C+ + + +   + AE VFELEP ++G +V+LAN+YA 
Sbjct: 725 EELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYAS 784

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
             +W +  ++R+ + R  +KK PGCSWIE+ G V+ F++G S HP  ++I   L++L L 
Sbjct: 785 VGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLR 844

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           M+  GY P T   + + +E +KE  L  HSE+LA+ FG+++   G+TIRV KNLRVC DC
Sbjct: 845 MREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDC 904

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H   K +S    REIV+RDS+RFHHFK G+CSC  FW
Sbjct: 905 HAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 179/676 (26%), Positives = 307/676 (45%), Gaps = 53/676 (7%)

Query: 73  FCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           + + G+  +A+E+      E ++ D   +   L  CA    L+ G+++HS +  SG+   
Sbjct: 33  YSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGLT-S 91

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           + ++ + LV M+  C D+    +VF+ +    V  W  ++  Y++ G + ++L    +M 
Sbjct: 92  NIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMD 151

Query: 191 SLGIAADSYTFSCVLKCLA------------------------VVGNS--------RRVK 218
           + G+  +  TF  ++   A                        ++GN+            
Sbjct: 152 AEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFD 211

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           D   +F  +    V+ W  MI+G   NG  E+GL VF++M   G   +  T ++++  C 
Sbjct: 212 DMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCR 271

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
           N  A+  G  + A  L++ F        +L+ +Y +CG LD A  + E M +R VV+W +
Sbjct: 272 NLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNA 331

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-N 397
           M+   A+ G    AI L R M  EG   +     S+L ACA    L  G+++H  +    
Sbjct: 332 MVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCG 391

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
            +Q  + V N+++ MY KCG    A SVF  MP KD VSWN +I           AL+LF
Sbjct: 392 LLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELF 451

Query: 448 VAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN-VANAIVDMYVK 505
             M L+    +  T+  +L AC  L  L+  R+IH      G   +   V N++V+MY +
Sbjct: 452 HGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYAR 511

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMH--GFGCDAIATFNDMRQAGIEPDEVSFI 563
           CG L+ A+  FD +  K L++W+I++A Y     G G  A   F +M   GI+P EV+F+
Sbjct: 512 CGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFV 571

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           S L AC+    ++ G            +E  L     ++++  + G+ S+A    + MP 
Sbjct: 572 SALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPE 631

Query: 624 APDATIWGSLLCG-CRIHHEVKLAEKVAEHVFE-LEPDNTGYYVLLANVYAEAEKWEEVK 681
               + W SL+       H ++    + E + +  +PD+     +L  +         V+
Sbjct: 632 KCLIS-WNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVE 690

Query: 682 KLREKISRRGLKKNPG 697
             R  I   GL+ + G
Sbjct: 691 HFRSSIQDHGLEPSSG 706



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 233/481 (48%), Gaps = 48/481 (9%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+  C  + +   VF+ I    VF W ++M  YS+ G+++E+L LF +MQ  G   D   
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 201 FSCVLKCLA------------------------VVGNS--------RRVKDAHKLFDELS 228
           F   L   A                        ++ NS        + V  A K+FD + 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            RDVVSW  M++ Y  NG   + LE    M   G   +  T VT++  CA    L  GR 
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H   +      +    N L+ MY  CG  D    VF +MG+ SV+ WT+MIAG ++ G 
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
           ++  + +FR M  EG++ +     S++  C     ++ G+ +   I E+   SS  ++ +
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPD 457
           L+ +Y +CG +  A+ +   M  +D+V+WN M+           A+ L   M ++ F  +
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 458 GVTMACILPACASLAALERGREIHGYILRHG-ISADRNVANAIVDMYVKCGVLVLARSLF 516
            VT   +L ACA+L AL +GREIH  +L  G +  +  V N+++ MY KCG    A S+F
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420

Query: 517 DMIPAKDLISWTIMI-AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           + +P KD +SW  +I A  G   F  DA+  F+ M   G+  +E + +S+L AC   GL 
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKFQ-DALELFHGMELEGLRSNEFTLLSLLEAC--GGLE 477

Query: 576 D 576
           D
Sbjct: 478 D 478



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 232/468 (49%), Gaps = 13/468 (2%)

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
           G   RV DA  +FD +S ++V SW  M++ Y  NG   + LE+F  M   G   D    V
Sbjct: 3   GKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFV 62

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
             L  CA  G L  GR +H+  + +  +  I  +N+L++MY KC D+  A +VF+ M  R
Sbjct: 63  IALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLR 122

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            VVSWT+M+A YA+ G +  A+     M  EG++P+     +I+  CA   LL++G+ +H
Sbjct: 123 DVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIH 182

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
             I    ++    + NAL+ MY  CGS  D +SVF++M    ++ W TMI          
Sbjct: 183 HRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYE 242

Query: 443 -ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             L +F  M L+  + + VT   ++  C +L A++ G  I   IL     +   +A +++
Sbjct: 243 EGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLI 302

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
            +Y +CG+L  A+ L + +  +D+++W  M+     +G   +AI     M   G   ++V
Sbjct: 303 SLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKV 362

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +++SVL AC++   + +G      +     ++ ++     ++ +  + G    A    E 
Sbjct: 363 TYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEA 422

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           MP   D + W +++     + + + A ++  H  ELE   +  + LL+
Sbjct: 423 MPRKDDVS-WNAVINASVGNSKFQDALELF-HGMELEGLRSNEFTLLS 468



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 168/338 (49%), Gaps = 13/338 (3%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MY KC  +  A+ VF+ +  ++V SWT M+A Y++ G +  A+ LF  M  EG  PD   
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
               L ACA  G L+ G+ +H  +  + + S++ +SN+L++MY KC  +  AE VF+ M 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 431 VKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGRE 479
           ++D+VSW  M+           AL+    M  +  +P+ VT   I+  CA L  L+ GR+
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           IH  I+  G+  D  + NA+V MY  CG     +S+F  +    ++ WT MIAG   +G 
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
             + +  F  M   G++ +EV+++S++  C +   V EG    +    E           
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEG-EMIDARILESPFCSSTLLAT 299

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
            ++ L  + G L  A   +E M    D   W +++  C
Sbjct: 300 SLISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVTAC 336


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/625 (40%), Positives = 373/625 (59%), Gaps = 12/625 (1%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++ A ++FD+     V +WN MI  Y   G   + L ++  M + G   D +T   VL  
Sbjct: 55  IESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKA 114

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C     L  G      A+   +  ++     +L++Y+KCG +D A+RVF+KMG R +V W
Sbjct: 115 CTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCW 174

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T+MI G A+ G    A+ ++R M ++ +E D   +  ++ AC   G  ++G  +H Y+  
Sbjct: 175 TTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIR 234

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
            D+   + V  +L+DMYAK G +  A  VF +M  K+++SW+ +I           AL L
Sbjct: 235 KDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQL 294

Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
            V M    ++PD V++  +L AC+ +  L+ G+ +HGYI+R  +  D   + A++DMY K
Sbjct: 295 VVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSK 353

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           CG L  AR++FD I  +D ISW  +IA YG+HG G +A++ F  MR+  ++PD  +F S+
Sbjct: 354 CGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASL 413

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L A SHSGLV++G  +F++M  E  I+P  +HYACMVDLLSR G + EA   IE M   P
Sbjct: 414 LSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEP 473

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
              IW +LL GC  H +  + E  A+ V EL PD+ G Y L++N +A A +W+EV ++R+
Sbjct: 474 GIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRK 533

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            + + G+KK PG S +E+ GK++ F+    SH   ++I  +L +L  EMK  GY PKT +
Sbjct: 534 IMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEF 593

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L N +E  KE  LC HSE+LA+AFG+LN   G  + +TKNLRVCGDCHE  KF+SK   
Sbjct: 594 VLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVN 653

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REIV+RD  RFHHFKDG CSC  +W
Sbjct: 654 REIVVRDVKRFHHFKDGVCSCGDYW 678



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 247/500 (49%), Gaps = 48/500 (9%)

Query: 117 KVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
           K+H+++  +GI    G   +KL+  +   G ++  R+VF+K     V  WN ++  YS+ 
Sbjct: 25  KIHALMILTGI-FGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRR 83

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKC----------------------------- 207
           G   E+L L+ +M S G+  DS T++ VLK                              
Sbjct: 84  GAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVG 143

Query: 208 ---LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
              L +     ++ +A ++FD++  RD+V W  MI+G   NG A + ++++++M      
Sbjct: 144 AAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVE 203

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D   M+ ++  C   G    G ++H + ++     ++    +L+DMY+K G L+ A  V
Sbjct: 204 GDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCV 263

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F +M  ++V+SW+++I+G+A+ G    A++L   M   G +PD  ++ S+L AC+  G L
Sbjct: 264 FRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFL 323

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
           ++GK VH YI    +      S A++DMY+KCGS++ A +VF+Q+  +D +SWN +I   
Sbjct: 324 KLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASY 382

Query: 443 --------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISAD 492
                   AL LF+ M + N +PD  T A +L A +    +E+GR     ++  + I   
Sbjct: 383 GIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPS 442

Query: 493 RNVANAIVDMYVKCGVLVLARSLFD-MIPAKDLISWTIMIAGYGMHG-FGCDAIATFNDM 550
                 +VD+  + G +  A+ L + MI    +  W  +++G   HG F    +A    +
Sbjct: 443 EKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVL 502

Query: 551 RQAGIEPDEVSFISVLYACS 570
                +P   S +S  +A +
Sbjct: 503 ELNPDDPGIYSLVSNFFATA 522



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 201/398 (50%), Gaps = 26/398 (6%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +HA  +        + N  L+  Y++ G ++ A +VF+K  +  V +W +MI  Y+R G 
Sbjct: 26  IHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGA 85

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+ L+  M  EG+ PD    T +L AC     L  G++      +      ++V  A
Sbjct: 86  MFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAA 145

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPD 457
           ++++YAKCG M +A  VF++M  +D+V W TMI           A+D++  M  +  E D
Sbjct: 146 VLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGD 205

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
           GV M  ++ AC +L   + G  IHGY++R  I  D  V  ++VDMY K G L LA  +F 
Sbjct: 206 GVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFR 265

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            +  K++ISW+ +I+G+  +GF  +A+    DM+  G +PD VS +SVL ACS  G +  
Sbjct: 266 RMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKL 325

Query: 578 GWRFFNMMRYECNIEPKLEHYAC-----MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           G      +        +  H+ C     ++D+ S+ G+LS A    + +    D+  W +
Sbjct: 326 GKSVHGYI-------VRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISF-RDSISWNA 377

Query: 633 LLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
           ++    IH   + A  +   + E  ++PD+  +  LL+
Sbjct: 378 IIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLS 415



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 148/359 (41%), Gaps = 41/359 (11%)

Query: 57  KTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLED 114
           + LVC    +   I    + G   +A+++     K ++  D      ++Q C  L   + 
Sbjct: 169 RDLVC----WTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKM 224

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           G  +H  +    I++D  ++ + LV M+   G L+    VF ++    V  W+ L+  ++
Sbjct: 225 GLSIHGYMIRKDIIMDV-IVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFA 283

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------- 221
           + G    +L L   MQS G   DS +   VL   + VG  +  K  H             
Sbjct: 284 QNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVS 343

Query: 222 ------------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
                              +FD++S RD +SWN +I+ Y  +G  E+ L +F +M     
Sbjct: 344 STAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNV 403

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNTLLDMYSKCGDLDGAI 322
             D AT  ++LS  ++ G +  GR   +  +              ++D+ S+ G ++ A 
Sbjct: 404 KPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQ 463

Query: 323 RVFEKM-GERSVVSWTSMIAGYAREGVF-DGAIRLFRGMVREGIEPDVYAITSILHACA 379
            + E M  E  +  W ++++G    G F  G +   + +     +P +Y++ S   A A
Sbjct: 464 ELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATA 522



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 127/290 (43%), Gaps = 26/290 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +++A I  F + G    A++++   +    K D+ +  S+L  C+ +  L+ GK VH  I
Sbjct: 274 SWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYI 333

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
                +  D V  + ++ M+  CG L   R VF++I       WN ++  Y   G+ +E+
Sbjct: 334 VRR--LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEA 391

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNC 237
           L LF +M+   +  D  TF+ +L   +   +S  V+     F  + +   +      + C
Sbjct: 392 LSLFLQMRETNVKPDHATFASLLSAFS---HSGLVEKGRYWFSIMVNEYKIQPSEKHYAC 448

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+      G  E+  E+ + M+       +A  V +LSGC N G  + G        +  
Sbjct: 449 MVDLLSRAGRVEEAQELIESMIT---EPGIAIWVALLSGCLNHGKFLIG--------EMA 497

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE-RSVVSWTSM--IAGYA 344
             K +  N     +YS   +     R ++++ E R ++  T M  + GY+
Sbjct: 498 AKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYS 547



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 8/191 (4%)

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           +IH  ++  GI    N    ++  Y + G +  AR +FD  P   + +W  MI  Y   G
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV---DEGWRFFNMMRYECNIEPKL 595
              +A++ ++ M   G+ PD  ++  VL AC+ S  +   +E WR      Y  ++    
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVG- 143

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
              A +++L ++ G + EA R  + M    D   W +++ G   + + + A  +   + +
Sbjct: 144 ---AAVLNLYAKCGKMDEAMRVFDKMG-RRDLVCWTTMITGLAQNGQAREAVDIYRQMHK 199

Query: 656 LEPDNTGYYVL 666
              +  G  +L
Sbjct: 200 KRVEGDGVVML 210


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 283/755 (37%), Positives = 398/755 (52%), Gaps = 94/755 (12%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL 223
           +I N L+  Y K+ +   + +LF +++   I A +     ++   +  GNS   ++    
Sbjct: 51  YILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVART----TLIAAHSSAGNSNLAREIF-F 105

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA----- 278
              L  RD V +N MI+GY  N      +E+F+++L  GF  D  T  +VL   A     
Sbjct: 106 ATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVED 165

Query: 279 -------NCGALMFGRAVHAFALKACFS------------------------------KE 301
                  +C  +  G       L A  S                               E
Sbjct: 166 EKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDE 225

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +S+  T++  Y + G+LD A +  + M E+ VV+W +MI+GY   G F  A+ +FR M  
Sbjct: 226 LSWT-TMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYL 284

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND----MQSSLYVSNALMDMYAKCG 417
            GI+ D +  TS+L ACA  G    GK VH YI   +    +  SL V+NAL  +Y KCG
Sbjct: 285 LGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCG 344

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------------------------------- 442
            + +A  VFNQMPVKD+VSWN ++                                    
Sbjct: 345 KVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQ 404

Query: 443 ------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 +L LF  M  + FEP     A  + ACA LAAL  GR++H  ++R G  +  + 
Sbjct: 405 NGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSA 464

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            NA++ MY KCGV+  A  LF  +P  D +SW  MIA  G HG G  A+  F  M +  I
Sbjct: 465 GNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDI 524

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
            PD ++F++VL  CSH+GLV+EG R+F  M     I P  +HYA M+DLL R G  SEA 
Sbjct: 525 LPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAK 584

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
             IE MPV P   IW +LL GCRIH  + L  + AE +FEL P + G YVLL+N+YA   
Sbjct: 585 DMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVG 644

Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
           +W++V K+R+ +  +G+KK PGCSWIE++ KV++F+     HP  + + + L+ L L+M+
Sbjct: 645 RWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMR 704

Query: 736 REGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHE 795
           + GY P T++ L + +  +KE  L  HSEKLA+ FG+L LP G T+RV KNLR+CGDCH 
Sbjct: 705 KLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHN 764

Query: 796 MAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             KFMSK   REIV+RD  RFHHFK+G CSC  +W
Sbjct: 765 AFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 163/438 (37%), Gaps = 104/438 (23%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII- 122
           +NA I  +   G   +A+E+        I  D  TY S+L  CA+      GK+VH+ I 
Sbjct: 259 WNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYIL 318

Query: 123 -CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFN---------------------KID 159
             E    +D  + + + L  ++  CG + E R+VFN                     +ID
Sbjct: 319 RTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRID 378

Query: 160 NGKVFI----------WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS-CVLKC- 207
             K F           W +++   ++ G  +ESL LF +M+S G     Y F+  ++ C 
Sbjct: 379 EAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACA 438

Query: 208 -LAVVGNSRR-----------------------------VKDAHKLFDELSDRDVVSWNC 237
            LA + + R+                             V+ AH LF  +   D VSWN 
Sbjct: 439 WLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNA 498

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MI+    +G   + LE+F+ ML      D  T +TVLS C++ G +  G           
Sbjct: 499 MIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGH---------- 548

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
                 +  ++  +Y  C   D   R               MI    R G F  A  +  
Sbjct: 549 -----RYFKSMSGLYGICPGEDHYAR---------------MIDLLCRAGKFSEAKDMIE 588

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKC 416
            M    +EP      ++L  C   G +++G    + + E        YV   L +MYA  
Sbjct: 589 TM---PVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYV--LLSNMYATV 643

Query: 417 GSMADAESVFNQMPVKDI 434
           G   D   V   M  K +
Sbjct: 644 GRWDDVAKVRKLMRDKGV 661



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 33/127 (25%)

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA---- 532
            R +H +++  G      + N ++D+Y K   LV A  LFD I   D+++ T +IA    
Sbjct: 34  ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93

Query: 533 -----------------------------GYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
                                        GY  +  G  AI  F D+ + G  PD  +F 
Sbjct: 94  AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFT 153

Query: 564 SVLYACS 570
           SVL A +
Sbjct: 154 SVLGALA 160


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 291/829 (35%), Positives = 415/829 (50%), Gaps = 130/829 (15%)

Query: 93  KIDTKTYCSILQLC--ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           ++    Y + L LC   +L S    + VH  +  SG  +  G + ++L+ ++    D   
Sbjct: 8   RVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLR-GHIVNRLIDIYWKSSDFVY 66

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
            R++F++I    V     L+  YS  GN K                              
Sbjct: 67  ARKLFDEIPQPDVIARTTLITAYSALGNLKM----------------------------- 97

Query: 211 VGNSRRVKDAHKLFDE--LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                    A ++F+E  L  RD V +N MI+GY         +E+F+ M    F  D  
Sbjct: 98  ---------AREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDF 148

Query: 269 TMVTVLSGCA-------NCGALM-----FGRAVHAFALKACFS----------------- 299
           T  +VLS           CG +      FG  +    L A  S                 
Sbjct: 149 TFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLM 208

Query: 300 -------KEISFNN-----TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
                   E+   N     TL+  Y + GDL GA  + + M E+  ++W +MI+GY   G
Sbjct: 209 ASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHG 268

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS----L 403
           +F+ A+ LFR M   G++ D    TS++ ACA  G   +GK VH YI +N++       L
Sbjct: 269 LFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLL 328

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------------------- 442
            V N L+ +Y K G +  A  +F +MPVKDI++WNT++                      
Sbjct: 329 SVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEK 388

Query: 443 --------------------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIH 481
                               AL LF  M L  +EP+    A  + AC+ L ALE GR++H
Sbjct: 389 NLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLH 448

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
             I+  G  +  +V NA++ MY +CG++  AR++F  +P  D +SW  MIA  G HG G 
Sbjct: 449 AQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGV 508

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
            AI  +  M + GI PD  +F++VL ACSH+GLV+EG R+FN M     I P  +HYA M
Sbjct: 509 KAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARM 568

Query: 602 VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNT 661
           +DL  R G  S+A   I+ MP    A IW +LL GCR H  + L  + AE +F+L P + 
Sbjct: 569 IDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHD 628

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK 721
           G YVLL+N+YA   +W +V + R+ +  RG+KK P CSW E++ KV++F+   + HP   
Sbjct: 629 GTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVL 688

Query: 722 KIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
            I + L++L LEMK+ GY P T+Y L + +   KE AL  HSEKLA+AFG++ LP G T+
Sbjct: 689 SIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATV 748

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           RV KNLR+CGDCH   KFMSK   REIV+RD  RFHHFK+G CSCR +W
Sbjct: 749 RVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 246/534 (46%), Gaps = 101/534 (18%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKK---VHSII 122
           YNA I  +  + +   A+E+  +   +      +     L A      D ++   +H  +
Sbjct: 115 YNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTV 174

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGD---------LKEGRRVFNKIDNGKVFIWNLLMHEY 173
            + GI I   VL + L+ ++V C           +   R++F+++     FIW  L+  Y
Sbjct: 175 VKFGIEIFPAVLNA-LLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGY 233

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVV 233
            + G+                                      +  A ++ D ++++  +
Sbjct: 234 VRNGD--------------------------------------LTGAREILDTMTEQPGI 255

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           +WN MISGY+ +G+ E  L +F++M  LG  VD +T  +V+S CA+ G  + G+ VHA+ 
Sbjct: 256 AWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYI 315

Query: 294 LKACFSKE----ISFNNTLLDMYSKCGDLDGAIRVF------------------------ 325
           LK   + +    +S  NTL+ +Y K G +DGA ++F                        
Sbjct: 316 LKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRM 375

Query: 326 -------EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
                   +M E+++++WT MI+G A+ G  + A++LF  M  +G EP+ YA    + AC
Sbjct: 376 EEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITAC 435

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
           +  G LE G+ +H  I      S+L V NA++ MYA+CG +  A ++F  MP  D VSWN
Sbjct: 436 SVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWN 495

Query: 439 TMIGAL----------DLFVAML-QNFEPDGVTMACILPACASLAALERG-REIHGYILR 486
           +MI AL          +L+  ML +   PD  T   +L AC+    +E G R  +  +  
Sbjct: 496 SMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLEN 555

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP--AKDLISWTIMIAGYGMHG 538
           +GI+   +    ++D++ + G    A+++ D +P  A+  I W  ++AG   HG
Sbjct: 556 YGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPI-WEALLAGCRTHG 608


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/655 (39%), Positives = 387/655 (59%), Gaps = 16/655 (2%)

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +M   G+  D +T S ++     +  S  ++ A  +F ++ +    + N +I G     +
Sbjct: 10  QMLRTGLFFDPFTASKIV-AFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNL 68

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
            ++ L  ++EM+  G   D  T  ++   C N      G+ +H  + K  F+ +    NT
Sbjct: 69  HQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNT 125

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF-RGMVREGIEP 366
           L++MYS CG L  A +VF+KM +++VVSW +MI  +A+    + A+RLF R M  E ++P
Sbjct: 126 LMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKP 185

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           +   + ++L ACA    L + K +H+YI E+     + ++  LMD+Y KCG +  A  +F
Sbjct: 186 NEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLF 245

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALE 475
           ++   K++ SWN MI           AL LF  M  +  + D VTMA +L AC  L ALE
Sbjct: 246 DKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALE 305

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
            G+ +H YI +  I  D  +  A+VDMY KCG +  A  +F  +P KD+++WT +I G  
Sbjct: 306 LGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLA 365

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
           M G   +A+  F++M   G++PD ++F+ VL ACSH+G VDEG   FN M     I+P +
Sbjct: 366 MCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTI 425

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           EHY  +VD+L R G ++EA   I+ MP+APD  + G LL  CRIH  ++ AE+ A+ + E
Sbjct: 426 EHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLE 485

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           ++P ++G YVLL+N+Y  ++KWEE K+ RE ++ RG++K PGCS IE+ G V+ FV G S
Sbjct: 486 IDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDS 545

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
           SH  + +I  +L+ +  ++K  GY P     L +  E EKE  L  HSEKLA+AFG+L+ 
Sbjct: 546 SHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLST 605

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             G  IRV KNLR+C DCH   K +SK   REI++RD NRFHHFKDG CSCRGFW
Sbjct: 606 SVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 214/463 (46%), Gaps = 55/463 (11%)

Query: 6   AKITTNFLFFSPPNQSYGKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKN 65
           A++    LFF P   S    F S + S       S  ++    + I    S T  C +  
Sbjct: 9   AQMLRTGLFFDPFTASKIVAFCSLQES------GSLQYARLVFSQIPNPTSYT--CNS-- 58

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSK---IDTKTYCSILQLCADLKSLEDGKKVHSII 122
               I R C   NL +   + Y     +    D  T+ S+ + C   ++  +GK++H   
Sbjct: 59  ----IIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHS 111

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G    D    + L+ M+  CG L   R+VF+K+++  V  W  ++  +++     E+
Sbjct: 112 TKLGFA-SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEA 170

Query: 183 LYLFKK-MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK------------------- 222
           + LF + M+S  +  +  T   VL   A   +   VK  H+                   
Sbjct: 171 VRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMD 230

Query: 223 -------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                        LFD+  ++++ SWN MI+G++ +   E+ L +F+EM   G   D  T
Sbjct: 231 VYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVT 290

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           M ++L  C + GAL  G+ +HA+  K     +++    L+DMY+KCG ++ AI+VF +M 
Sbjct: 291 MASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP 350

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           E+ V++WT++I G A  G  + A++ F  M  +G++PD      +L AC+  G ++ G  
Sbjct: 351 EKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGIS 410

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
             + + +   +Q ++     L+D+  + G +A+AE +   MP+
Sbjct: 411 HFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPM 453



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 146/353 (41%), Gaps = 67/353 (18%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           +  SE  K +  T  ++L  CA  + L   K++H  I E G      VL + L+ ++  C
Sbjct: 177 MMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFG-RHVVLNTVLMDVYCKC 235

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCV 204
           G ++  R +F+K     +F WN++++ + +  N++E+L LF++MQ+ GI  D  T  S +
Sbjct: 236 GCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLL 295

Query: 205 LKCL------------AVVGNSR-------------------RVKDAHKLFDELSDRDVV 233
           L C             A +   R                    ++ A ++F E+ ++DV+
Sbjct: 296 LACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVM 355

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           +W  +I G    G AE  L+ F EM   G   D  T V VL+ C++ G +  G       
Sbjct: 356 TWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEG------- 408

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
                   IS  N++ D Y       G     E  G         ++    R G    A 
Sbjct: 409 --------ISHFNSMSDTY-------GIQPTIEHYG--------GLVDILGRAGRIAEAE 445

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND-MQSSLYV 405
            L + M    + PD + +  +L AC   G LE  +     + E D   S  YV
Sbjct: 446 ELIKSM---PMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYV 495


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 266/696 (38%), Positives = 395/696 (56%), Gaps = 47/696 (6%)

Query: 181 ESLYLFKKMQS----LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWN 236
           +S+  FK++ +     G+    +  S +++  + V  S  +  A  LF+ + + ++  WN
Sbjct: 40  QSIRTFKQIHAHIIKTGLHNTLFALSKLIE-FSAVSRSGDISYAISLFNSIEEPNLFIWN 98

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MI G   +      L  F  M+  G   +  T   +L  CA   +   G+ +HA  LK 
Sbjct: 99  SMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKL 158

Query: 297 CFSKEISFNNTLLDMYSKCGDL-------------------------------DGAIRVF 325
            F  ++  + +L++MY++ G++                               D A ++F
Sbjct: 159 GFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLF 218

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++M  + VVSW +MIAGYA+ G    A+ LF  M +  + P+   I S+L ACA    L+
Sbjct: 219 DEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALD 278

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
           +G  +  +I++  + S+L + NAL+DMY+KCG +  A  +F+ M  +D++SWN MIG   
Sbjct: 279 LGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYT 338

Query: 443 -------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  AL LF  ML +  EP  +T   ILP+CA L A++ G+ IH YI ++  S   +
Sbjct: 339 HMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTS 398

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           ++ +++D+Y KCG +V AR +FD +  K L SW  MI G  MHG    A   F+ M   G
Sbjct: 399 LSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDG 458

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           IEP+E++F+ +L AC H+GLVD G +FF+ M  +  I PK +HY CM+DLL R G   EA
Sbjct: 459 IEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEA 518

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
              ++ M V PD  IWGSLL  CR H  V+L E VAE +FELEPDN G YVLL+N+YA A
Sbjct: 519 ESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGA 578

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            KW++V ++R +++ RG+KK PGC+ IE+   V+ F+ G   HP ++ I  +L+ +  ++
Sbjct: 579 GKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQL 638

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           K  G+   T   L + DE  KE AL  HSEKLA+AFG+++   G  IR+ KNLRVC +CH
Sbjct: 639 KVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCH 698

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              K +SK   REI+ RD NRFHHFKDG CSC  +W
Sbjct: 699 SATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 228/457 (49%), Gaps = 52/457 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T+  +L+ CA L S  +GK++H+ + + G V  D  + + L+ M+   G++   + V
Sbjct: 128 NSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFV-SDVFIHTSLINMYAQSGEMNNAQLV 186

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F++                    NF+                D+ +F+ ++   A+ G  
Sbjct: 187 FDQ-------------------SNFR----------------DAISFTALIAGYALWGYM 211

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
            R   A +LFDE+  +DVVSWN MI+GY   G +++ L +F++M       + +T+V+VL
Sbjct: 212 DR---ARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVL 268

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S CA   AL  G ++ ++         +   N L+DMYSKCGDL  A  +F+ M ER V+
Sbjct: 269 SACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVI 328

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW  MI GY     +  A+ LFR M+  G+EP      SIL +CA  G +++GK +H YI
Sbjct: 329 SWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYI 388

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GAL 444
            +N    S  +S +L+D+YAKCG++  A  VF+ M +K + SWN MI           A 
Sbjct: 389 NKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAF 448

Query: 445 DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDM 502
           +LF  M  +  EP+ +T   IL AC     ++ G++    +++ + IS        ++D+
Sbjct: 449 ELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDL 508

Query: 503 YVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
             + G+   A SL   +  K D   W  ++     HG
Sbjct: 509 LGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHG 545



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 206/423 (48%), Gaps = 53/423 (12%)

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDM--YSKCGDLDGAIRVFEKMGERSVVS 335
           + C ++   + +HA  +K      +   + L++    S+ GD+  AI +F  + E ++  
Sbjct: 37  SKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFI 96

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W SMI G +       A+  F  M+  G+EP+ Y    +L +CA       GK +H ++ 
Sbjct: 97  WNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVL 156

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ--------------------------- 428
           +    S +++  +L++MYA+ G M +A+ VF+Q                           
Sbjct: 157 KLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQ 216

Query: 429 ----MPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAA 473
               MPVKD+VSWN MI           AL LF  M + N  P+  T+  +L ACA   A
Sbjct: 217 LFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNA 276

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           L+ G  +  +I   G+ ++  + NA++DMY KCG L  AR LFD +  +D+ISW +MI G
Sbjct: 277 LDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGG 336

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           Y       +A+A F +M  +G+EP E++F+S+L +C+H G +D G      +    N   
Sbjct: 337 YTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSV- 395

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
                  ++DL ++ GN+  A +  + M +   A+ W +++CG  +H +       A+  
Sbjct: 396 STSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLAS-WNAMICGLAMHGQ-------ADKA 447

Query: 654 FEL 656
           FEL
Sbjct: 448 FEL 450



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 93/400 (23%), Positives = 175/400 (43%), Gaps = 71/400 (17%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + ++G  ++A+ +     K+ +  +  T  S+L  CA   +L+ G  + S I
Sbjct: 228 SWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWI 287

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+  +  ++ + L+ M+  CGDL+  R +F+ +    V  WN+++  Y+   ++KE+
Sbjct: 288 EDRGLCSNLKLVNA-LIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEA 346

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG------------------------------ 212
           L LF++M + G+     TF  +L   A +G                              
Sbjct: 347 LALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDL 406

Query: 213 --NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 +  A ++FD +  + + SWN MI G   +G A+K  E+F +M + G   +  T 
Sbjct: 407 YAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITF 466

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           V +LS C + G +  G+                F ++++  Y              K+  
Sbjct: 467 VGILSACKHAGLVDLGQ---------------QFFSSMVQDY--------------KISP 497

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +S   +  MI    R G+F+ A  L + M    ++PD     S+L AC   G +E+G+ V
Sbjct: 498 KS-QHYGCMIDLLGRAGLFEEAESLLQNM---EVKPDGAIWGSLLGACRDHGRVELGELV 553

Query: 391 HDYIKENDMQSS-LYVSNALMDMYAKCGSMADAESVFNQM 429
            + + E +  +   YV   L ++YA  G   D   +  ++
Sbjct: 554 AERLFELEPDNPGAYV--LLSNIYAGAGKWDDVARIRTRL 591


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/751 (35%), Positives = 424/751 (56%), Gaps = 44/751 (5%)

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +S +V  + V  ++ +  +V  G +K    +F  +     FIWN+++  +   G F +++
Sbjct: 52  QSFLVERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAV 111

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSRRV-- 217
             + +M+  G+  D++T+  V+K                            +GNS  +  
Sbjct: 112 DFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMY 171

Query: 218 ------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                 + A  +F E+  RD+VSWN MISGY++ G   + L  F+EM   G  +D  +++
Sbjct: 172 AKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVI 231

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
            +L  C+  G L  G+ +H   +++    ++    +L+DMY+KCG +D A R+F+++ ++
Sbjct: 232 GILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDK 291

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDV 390
           S+V+W +MI GY+       +    R M   G + PD   + ++L  CA    + +GK V
Sbjct: 292 SIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSV 351

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H +   N     L +  AL+DMY +CG +  AE +F QM  ++++SWN MI         
Sbjct: 352 HGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGEN 411

Query: 443 --ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             A+ LF  +  +  +PD  T+A ILPA A LA+L    +IHGY+ +  + ++  V+N+I
Sbjct: 412 RKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSI 471

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           V MY KCG L+ AR +FD +  KD+ISW  +I  Y +HGFG  +I  F++MR+ G EP+ 
Sbjct: 472 VFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNG 531

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            +F+S+L +CS +GLV+EGW +FN M+ + NI P +EHY C++DL+ RTGNL  A  FIE
Sbjct: 532 STFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIE 591

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP+AP A IWGSLL   R   +V+LAE  AEH+  LE DNTG YVLL+N+YAEA +WE+
Sbjct: 592 EMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWED 651

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V++++  + + GL+K+ GCS +++  K   FV    S      +  +L  +  ++  + Y
Sbjct: 652 VERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVY 711

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
                    +  E ++  +   HS +LA+ FG+++   G  + V KN+R+C  CH  AK 
Sbjct: 712 VHSLTKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRFAKR 771

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +S+T +REI++RDS  FHHF  G CSC  +W
Sbjct: 772 ISETTKREIIVRDSKIFHHFNGGHCSCGDYW 802



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 161/552 (29%), Positives = 261/552 (47%), Gaps = 30/552 (5%)

Query: 187 KKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
           K+ QS  +  +S + +  L      G    +K+A  LF+ +   D   WN MI G++ NG
Sbjct: 49  KRNQSFLVERNSVSLTRALSSYVERG---YMKNALDLFENMRQCDTFIWNVMIRGFVDNG 105

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           +    ++ +  M   G   D  T   V+  C     L  G  VH   +K+    +I   N
Sbjct: 106 LFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGN 165

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           +L+ MY+K G ++ A  VF +M  R +VSW SMI+GY   G    ++  FR M   GI+ 
Sbjct: 166 SLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKL 225

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D +++  IL AC+ +G L  GK++H  +  + ++  + V  +L+DMYAKCG M  AE +F
Sbjct: 226 DRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLF 285

Query: 427 NQMPVKDIVSWNTMIGALDLFVAMLQNF------------EPDGVTMACILPACASLAAL 474
           +Q+  K IV+WN MIG   L     ++F             PD +TM  +LP CA L A+
Sbjct: 286 DQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAI 345

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
             G+ +HG+ +R+G      +  A+VDMY +CG L  A  LF  +  ++LISW  MIA Y
Sbjct: 346 LLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASY 405

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
             +G    A+  F D+    ++PD  +  S+L A +    + E  +    +  +  ++  
Sbjct: 406 TKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVT-KLKLDSN 464

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
                 +V +  + GNL  A    + M    D   W +++    IH   +++ ++   + 
Sbjct: 465 TFVSNSIVFMYGKCGNLLRAREIFDRMTF-KDVISWNTVIMAYAIHGFGRISIELFSEMR 523

Query: 655 E--LEPDNTGYYVLLANVYAEA---EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           E   EP+ + +  LL +        E WE    +     +R    NPG   IE  G +  
Sbjct: 524 EKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSM-----KRDYNINPG---IEHYGCILD 575

Query: 710 FVAGGSSHPHAK 721
            +    +  HAK
Sbjct: 576 LIGRTGNLDHAK 587



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 252/507 (49%), Gaps = 48/507 (9%)

Query: 61  CKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKV 118
           C T  +N  I  F + G    A++  +  E   +  D  TY  +++ C  L  L +G++V
Sbjct: 89  CDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERV 148

Query: 119 HSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
           H  + +SG+ +D   +G+ L+ M+   G ++    VF ++    +  WN ++  Y   G+
Sbjct: 149 HGKVIKSGLDLDI-YIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGD 207

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH----------------- 221
              SL  F++MQ+ GI  D ++   +L   ++ G  R  K+ H                 
Sbjct: 208 GWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTS 267

Query: 222 ---------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNV 265
                          +LFD+++D+ +V+WN MI GY  N  + +     ++M   G  + 
Sbjct: 268 LVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHP 327

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  TM+ +L  CA   A++ G++VH FA++  F   +     L+DMY +CG L  A  +F
Sbjct: 328 DWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLF 387

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
            +M ER+++SW +MIA Y + G    A+ LF+ +  + ++PD   I SIL A A    L 
Sbjct: 388 GQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLR 447

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-- 443
             + +H Y+ +  + S+ +VSN+++ MY KCG++  A  +F++M  KD++SWNT+I A  
Sbjct: 448 EAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYA 507

Query: 444 --------LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADR 493
                   ++LF  M +  FEP+G T   +L +C+    +  G E    + R + I+   
Sbjct: 508 IHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGI 567

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIP 520
                I+D+  + G L  A++  + +P
Sbjct: 568 EHYGCILDLIGRTGNLDHAKNFIEEMP 594


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/638 (39%), Positives = 377/638 (59%), Gaps = 12/638 (1%)

Query: 204 VLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
           + K +    N   V  A KLFD+  D DV  WN ++  Y  +G     +E++  M     
Sbjct: 110 IAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACV 169

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
           + D  +   VL  C+   AL  GR VH    +  F  ++   N L+ +Y+KCG++  A  
Sbjct: 170 SPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANA 229

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF ++ +R++VSWTS+I+GYA+ G    A+R+F  M +  + PD  A+ S+L A      
Sbjct: 230 VFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVED 289

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           LE GK +H  + +  ++    +  +L  +YAKCG +  A   FNQ+    ++ WN MI  
Sbjct: 290 LEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISG 349

Query: 443 ---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    A++LF  M  +N  PD +T+   + ACA + +LE  R +  YI       D
Sbjct: 350 YVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRND 409

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             V  +++D Y KCG + +AR +FD IP KD++ W+ M+ GYG+HG G ++I  F+ MRQ
Sbjct: 410 VIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQ 469

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           AG+ P++V+F+ +L AC +SGLV+EGW  F+ MR +  IEP+ +HYAC+VDLL R G+L 
Sbjct: 470 AGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMR-DYGIEPRHQHYACVVDLLGRAGHLD 528

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
            AY F+  MP+ P  ++WG+LL  C+IH  V L E  AE +F L+P NTG+YV L+N+YA
Sbjct: 529 RAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYA 588

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
            +  W+ V K+R  +  +GL K+ G S IEI GK+  F AG  +HP +K+I   ++ L  
Sbjct: 589 SSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLER 648

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
            +K  G+ P T   L + +  E E  LC HSE+LA+A+G+++ P G T+R+TKNLR C +
Sbjct: 649 RLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDN 708

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CH   K +SK   REIV+RD+ RFHHFKDG CSC  +W
Sbjct: 709 CHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 220/450 (48%), Gaps = 44/450 (9%)

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
           G L +KLV      G++   R++F+K  +  VF+WN ++  YS+ G F  ++ ++ +MQ 
Sbjct: 107 GFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQV 166

Query: 192 LGIAADSYTFSCVLK---CLAVVGNSRRVKD----------------------------- 219
             ++ D ++F CVLK    L  +   RRV                               
Sbjct: 167 ACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVR 226

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A+ +F  L DR +VSW  +ISGY  NG   + L +F EM       D   +V+VL    +
Sbjct: 227 ANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTD 286

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L  G+++H   +K     E     +L  +Y+KCG +  A   F ++   S++ W +M
Sbjct: 287 VEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAM 346

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I+GY + G  + AI LFR M  + I PD   +TS + ACA  G LE+ + + +YI  ++ 
Sbjct: 347 ISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEF 406

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVA 449
           ++ + V+ +L+D YAKCGS+  A  VF+++P KD+V W+ M+           ++ LF A
Sbjct: 407 RNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHA 466

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M Q    P+ VT   +L AC +   +E G ++   +  +GI         +VD+  + G 
Sbjct: 467 MRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGH 526

Query: 509 LVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
           L  A +    +P +  +S W  +++   +H
Sbjct: 527 LDRAYNFVMNMPIEPGVSVWGALLSACKIH 556



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 137/323 (42%), Gaps = 40/323 (12%)

Query: 55  ISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSL 112
           + +T+V    ++ + I  + + G   +A+ +     K+ +  D     S+L+   D++ L
Sbjct: 235 VDRTIV----SWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDL 290

Query: 113 EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHE 172
           E GK +H  + + G+  +  +L S L  ++  CG +   R  FN+++N  +  WN ++  
Sbjct: 291 EHGKSIHGCVIKMGLECEFDLLIS-LTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISG 349

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR----------------- 215
           Y K G  +E++ LF+ M+S  I  DS T +  +   A +G+                   
Sbjct: 350 YVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRND 409

Query: 216 ---------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
                           V  A  +FD + D+DVV W+ M+ GY  +G   + + +F  M  
Sbjct: 410 VIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQ 469

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
            G + +  T V +L+ C N G +  G  +                  ++D+  + G LD 
Sbjct: 470 AGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDR 529

Query: 321 AIRVFEKMG-ERSVVSWTSMIAG 342
           A      M  E  V  W ++++ 
Sbjct: 530 AYNFVMNMPIEPGVSVWGALLSA 552



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 48/102 (47%)

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           +I+  +L  G+     +   +V+     G +  AR LFD  P  D+  W  ++  Y  HG
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
           F   AI  +  M+ A + PD  SF  VL ACS    ++ G R
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRR 194


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/805 (34%), Positives = 440/805 (54%), Gaps = 53/805 (6%)

Query: 33  TLPIIVSSK--SHSSCTINPISASISKTLVCKTKN---YNAEIGRFCEVGNLEKAMEVLY 87
           +L +I S K  S  +   +PIS+      +  T N   +N+ I      G   +A+    
Sbjct: 51  SLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYT 110

Query: 88  SSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
              + K+  D  T+ S++  CA +  LE G  VH    E G    D  +G+ L+ M+   
Sbjct: 111 EMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFE-SDLYIGNALIDMYSRF 169

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
            DL   R VF ++ N     WN L+  Y   G ++++L ++ K +  G+  D +T S VL
Sbjct: 170 VDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVL 229

Query: 206 KCLA------------------------VVGNS--------RRVKDAHKLFDELSDRDVV 233
                                       ++GN          R+++A ++F +++ +D V
Sbjct: 230 LACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSV 289

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           +WN MI GY   G  E  +++F +M++ GF  D+ ++ + +  C   G L  G+ VH + 
Sbjct: 290 TWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYL 348

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           + + F  +    N L+DMY+KCGDL  A  VF+    +  V+W S+I GY + G +   +
Sbjct: 349 IGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGL 408

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
             F+ M  E  +PD      +L   +    +  G+ +H  + +   ++ L + N+L+D+Y
Sbjct: 409 ESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVY 467

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE-----------PDGVTMA 462
           AKCG M D   VF+ M   DI+SWNT+I +   F      F+           PD  T+ 
Sbjct: 468 AKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVL 527

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            ILP C+ LA   +G+EIHGYI + G  ++  + NA+++MY KCG L     +F  +  K
Sbjct: 528 GILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK 587

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           D+++WT +I+ +GM+G G  A+  F DM  +G+ PD V+FI+ ++ACSHSG+V EG RFF
Sbjct: 588 DVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFF 647

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
           + M+ + N+EP++EHYAC+VDLL+R+G L++A  FI  MP+ PDA++WG+LL  CR    
Sbjct: 648 DRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGN 707

Query: 643 VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIE 702
             +A++V++ + EL  D+TGYYVL++N+YA   KW++VK +R  +  +GLKK PG SWIE
Sbjct: 708 TNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIE 767

Query: 703 IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGH 762
           I+ +V +F  G  S     K++ LL+ L   M +EGY    ++AL + +E +K   LCGH
Sbjct: 768 IQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGH 827

Query: 763 SEKLAMAFGILNLPAGQTIRVTKNL 787
           SE+LA+AFG+LN   G  + +   L
Sbjct: 828 SERLAIAFGLLNTKPGSPLLIFPTL 852



 Score =  262 bits (669), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 179/614 (29%), Positives = 296/614 (48%), Gaps = 53/614 (8%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID- 159
           S+L+  +  K+    + VHS+I  SG+ +   +   KL+  +    D      VF  I  
Sbjct: 24  SLLKTLSSAKNTPQLRTVHSLIITSGLSL-SVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA---------- 209
              V++WN ++   +  G F ++L  + +M+   +  D++TF  V+   A          
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142

Query: 210 --------------VVGN------SRRV--KDAHKLFDELSDRDVVSWNCMISGYIANGV 247
                          +GN      SR V   +A  +F+E+S+RD VSWN +ISGY +NG 
Sbjct: 143 VHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF 202

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
            E  L+++ +    G   D  TM +VL  C +  A+  G AVH    K   + ++   N 
Sbjct: 203 WEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           LL MY K   L  A RVF KM  +  V+W +MI GYA+ G  + +++LF  M+ +G  PD
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPD 321

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
           + +ITS + AC   G L++GK VH Y+  +  +      N L+DMYAKCG +  A+ VF+
Sbjct: 322 MLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFD 381

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERG 477
               KD V+WN++I            L+ F  M    +PD VT   +L   + LA + +G
Sbjct: 382 TTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQG 441

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           R IH  +++ G  A+  + N+++D+Y KCG +     +F  + A D+ISW  +IA   +H
Sbjct: 442 RGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIAS-SVH 500

Query: 538 GFGCD-AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
              C       N+MR  G+ PDE + + +L  CS   +  +G      + ++   E  + 
Sbjct: 501 FDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYI-FKSGFESNVP 559

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
               ++++ S+ G+L    +  + M    D   W +L+    ++ E K A K  + + EL
Sbjct: 560 IGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYGEGKKALKAFQDM-EL 617

Query: 657 E---PDNTGYYVLL 667
               PD+  +   +
Sbjct: 618 SGVLPDSVAFIAFI 631


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 243/627 (38%), Positives = 372/627 (59%), Gaps = 13/627 (2%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V+ A  +FD++ +RDVVSW+ MI     N   +  LE+ +EM  +        MV++++ 
Sbjct: 145 VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNL 204

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNT--LLDMYSKCGDLDGAIRVFEKMGERSVV 334
            A+   +  G+A+HA+ ++   ++ +    T  LLDMY+KCG L  A ++F  + +++VV
Sbjct: 205 FADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVV 264

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SWT+MIAG  R    +   +LF  M  E I P+   + S++  C   G L++GK +H YI
Sbjct: 265 SWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYI 324

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------L 444
             N    SL ++ AL+DMY KC  + +A ++F+    +D++ W  M+ A           
Sbjct: 325 LRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAF 384

Query: 445 DLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           +LF  M      P  VT+  +L  CA   AL+ G+ +H YI +  +  D  +  A+VDMY
Sbjct: 385 NLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMY 444

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +  A  LF    ++D+  W  +I G+ MHG+G +A+  F +M + G++P++++FI
Sbjct: 445 AKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFI 504

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L+ACSH+GLV EG + F  M +   + P++EHY CMVDLL R G L EA+  I+ MP+
Sbjct: 505 GLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPI 564

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            P+  +WG+L+  CR+H   +L E  A  + E+EP+N GY VL++N+YA A +W +   +
Sbjct: 565 KPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGV 624

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R+ +   G+KK PG S IE+ G V+ F+ G  SHP  ++I  +L  +R ++   GY P T
Sbjct: 625 RKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDT 684

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              L+N DE EKE AL  HSEKLAMAFG+++      IR+ KNLRVC DCH   K +SK 
Sbjct: 685 STVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKI 744

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             R I++RD NRFHHF++G CSC  +W
Sbjct: 745 YGRVIIVRDRNRFHHFREGYCSCGDYW 771



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 203/384 (52%), Gaps = 19/384 (4%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +VL  C        G+ +H F LK    +++   N L+ MY +C  ++ A  VF+KM ER
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            VVSW++MI   +R   FD A+ L R M    + P   A+ S+++  A    + +GK +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218

Query: 392 DYIKENDMQSSLYV--SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
            Y+  N     + V  + AL+DMYAKCG +  A  +FN +  K +VSW  MI        
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 278

Query: 443 ---ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
                 LF+ M  +N  P+ +TM  ++  C    AL+ G+++H YILR+G S    +A A
Sbjct: 279 LEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATA 338

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +VDMY KC  +  AR+LFD    +D++ WT M++ Y        A   F+ MR +G+ P 
Sbjct: 339 LVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPT 398

Query: 559 EVSFISVLYACSHSGLVDEG-WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR- 616
           +V+ +S+L  C+ +G +D G W    + +    ++  L     +VD+ ++ G+++ A R 
Sbjct: 399 KVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN--TALVDMYAKCGDINAAGRL 456

Query: 617 FIEMMPVAPDATIWGSLLCGCRIH 640
           FIE   ++ D  +W +++ G  +H
Sbjct: 457 FIE--AISRDICMWNAIITGFAMH 478



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 226/484 (46%), Gaps = 48/484 (9%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S+L+ C  +   + GK++H  + + G+   D  +G+ L+ M+  C  ++  R VF+K+  
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGL-DRDVFVGNALMLMYGECACVEYARLVFDKMME 157

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
             V  W+ ++   S+   F  +L L ++M  + +         ++   A   N R  K  
Sbjct: 158 RDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAM 217

Query: 221 H----------------------------------KLFDELSDRDVVSWNCMISGYIANG 246
           H                                  +LF+ L+ + VVSW  MI+G I + 
Sbjct: 218 HAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSN 277

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
             E+G ++F  M       +  TM++++  C   GAL  G+ +HA+ L+  FS  ++   
Sbjct: 278 RLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALAT 337

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L+DMY KC D+  A  +F+    R V+ WT+M++ YA+    D A  LF  M   G+ P
Sbjct: 338 ALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRP 397

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
               I S+L  CA  G L++GK VH YI +  ++    ++ AL+DMYAKCG +  A  +F
Sbjct: 398 TKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLF 457

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALE 475
            +   +DI  WN +I           ALD+F  M  Q  +P+ +T   +L AC+    + 
Sbjct: 458 IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVT 517

Query: 476 RGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
            G+++   ++   G+         +VD+  + G+L  A  +   +P K + I W  ++A 
Sbjct: 518 EGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 577

Query: 534 YGMH 537
             +H
Sbjct: 578 CRLH 581



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/390 (22%), Positives = 164/390 (42%), Gaps = 60/390 (15%)

Query: 5   MAKITTNFLFFSPPNQSYGKKFASYK-----------PSTLPIIVSSKSHSSCTINPISA 53
           +A ++   LF    N   GK   +Y            P+T  ++     ++ C    ++ 
Sbjct: 196 VAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALL---DMYAKCGHLGLAR 252

Query: 54  SISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLK 110
            +   L  KT  ++ A I        LE+  ++    ++  I  +  T  S++  C    
Sbjct: 253 QLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTG 312

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
           +L+ GK++H+ I  +G  +    L + LV M+  C D++  R +F+   N  V IW  ++
Sbjct: 313 ALQLGKQLHAYILRNGFSVSLA-LATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAML 371

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------------NSRRVK 218
             Y++     ++  LF +M++ G+     T   +L   AV G            +  RV+
Sbjct: 372 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 431

Query: 219 --------------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
                                A +LF E   RD+  WN +I+G+  +G  E+ L++F EM
Sbjct: 432 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 491

Query: 259 LNLGFNVDLATMVTVLSGCANCGAL-----MFGRAVHAFALKACFSKEISFNNTLLDMYS 313
              G   +  T + +L  C++ G +     +F + VH F L      +I     ++D+  
Sbjct: 492 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGL----VPQIEHYGCMVDLLG 547

Query: 314 KCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 342
           + G LD A  + + M  + + + W +++A 
Sbjct: 548 RAGLLDEAHEMIKSMPIKPNTIVWGALVAA 577


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/696 (37%), Positives = 382/696 (54%), Gaps = 77/696 (11%)

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
             S R+ DA  +F E+ +RD VSW  M+ G    G   + ++   +M   GF     T+ 
Sbjct: 3   AKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLT 62

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-- 329
            VLS CA   A   GR VH+F +K      +   N++L+MY KCGD + A  VFE+M   
Sbjct: 63  NVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVR 122

Query: 330 -----------------------------ERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                                        +RS+VSW +MIAGY + G+   A++LF  M+
Sbjct: 123 SVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRML 182

Query: 361 RE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
            E  + PD + ITS+L ACA  G + IGK VH YI   +M  +  V+NAL+  YAK GS+
Sbjct: 183 HESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSV 242

Query: 420 ADAESVFNQ---------------------------------MPVKDIVSWNTMI----- 441
            +A  + +Q                                 M  +D+V+W  MI     
Sbjct: 243 ENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQ 302

Query: 442 -----GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 A+DLF +M+    EP+  T+A +L  CASLA L+ G++IH   +R  +    +V
Sbjct: 303 NGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSV 362

Query: 496 ANAIVDMYVKCGVLVLARSLFDMI-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           +NAI+ MY + G    AR +FD +   K+ I+WT MI     HG G +A+  F +M +AG
Sbjct: 363 SNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAG 422

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           +EPD ++++ VL ACSH+G V+EG R+++ ++ E  I P++ HYACMVDLL+R G  SEA
Sbjct: 423 VEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEA 482

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
             FI  MPV PDA  WGSLL  CR+H   +LAE  AE +  ++P+N+G Y  +ANVY+  
Sbjct: 483 QEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSAC 542

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +W +  ++ +    + ++K  G SW  I+ K+++F A    HP    + ++  R+  E+
Sbjct: 543 GRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEI 602

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           K  G+ P  +  L + D+  KE  L  HSEKLA+AFG+++ P   T+RV KNLRVC DCH
Sbjct: 603 KGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCH 662

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              K +SK   REI++RD+ RFHHF+DG CSC+ +W
Sbjct: 663 AAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 222/492 (45%), Gaps = 95/492 (19%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESG----IVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           T  ++L  CA  ++   G+KVHS + + G    + + + VL      M+  CGD +    
Sbjct: 60  TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLN-----MYGKCGDSETATT 114

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VF ++    V  WN ++   +  G    +  LF+ M                        
Sbjct: 115 VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESM------------------------ 150

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN-LGFNVDLATMVT 272
                          DR +VSWN MI+GY  NG+  K L++F  ML+      D  T+ +
Sbjct: 151 --------------PDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITS 196

Query: 273 VLSGCANCGALMFGRAVHAF--------------ALKACFSKEISFNN------------ 306
           VLS CAN G +  G+ VHA+              AL + ++K  S  N            
Sbjct: 197 VLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD 256

Query: 307 -------TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                   LL+ Y K GD++ A  +F  M  R VV+WT+MI GY + G  D AI LFR M
Sbjct: 257 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 316

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           +  G EP+ Y + ++L  CA    L+ GK +H     + ++ S  VSNA++ MYA+ GS 
Sbjct: 317 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSF 376

Query: 420 ADAESVFNQM-PVKDIVSWNTMIGAL----------DLFVAMLQ-NFEPDGVTMACILPA 467
             A  +F+Q+   K+ ++W +MI AL           LF  ML+   EPD +T   +L A
Sbjct: 377 PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 436

Query: 468 CASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLI 525
           C+    +  G+  +  I   H I+ + +    +VD+  + G+   A+     +P + D I
Sbjct: 437 CSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 496

Query: 526 SWTIMIAGYGMH 537
           +W  +++   +H
Sbjct: 497 AWGSLLSACRVH 508



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 191/436 (43%), Gaps = 79/436 (18%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           M++K G L  A  VF +M ER  VSWT M+ G  R G F  AI+    M  +G  P  + 
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           +T++L +CA      +G+ VH ++ +  + S + V+N++++MY KCG    A +VF +MP
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 431 VKDIVSWNTMIG-----------------------------------------ALDLFVA 449
           V+ + SWN M+                                          AL LF  
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 450 MLQ--NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM----- 502
           ML   +  PD  T+  +L ACA+L  +  G+++H YILR  ++ +  V NA++       
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 503 ----------------------------YVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
                                       YVK G +  AR +F ++  +D+++WT MI GY
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
             +G   +AI  F  M   G EP+  +  +VL  C+    +D G +  +       +E  
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYG-KQIHCRAIRSLLEQS 359

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
                 ++ + +R+G+   A R  + +    +   W S++     H + + A  + E + 
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419

Query: 655 E--LEPDNTGYYVLLA 668
              +EPD   Y  +L+
Sbjct: 420 RAGVEPDRITYVGVLS 435



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 103/460 (22%), Positives = 182/460 (39%), Gaps = 111/460 (24%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV----LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++NA I  + + G   KA+++    L+ S  +  D  T  S+L  CA+L ++  GK+VH+
Sbjct: 157 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAP-DEFTITSVLSACANLGNVRIGKQVHA 215

Query: 121 IICESGIVIDDGVLG--------------------------------SKLVFMFVTCGDL 148
            I  + +  +  V                                  + L+  +V  GD+
Sbjct: 216 YILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDM 275

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-- 206
           +  R +F  ++N  V  W  ++  Y + G   E++ LF+ M + G   +SYT + VL   
Sbjct: 276 ESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVC 335

Query: 207 ----CL------------AVVGNSRRVKD--------------AHKLFDELSDR-DVVSW 235
               CL            +++  S  V +              A ++FD++  R + ++W
Sbjct: 336 ASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITW 395

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFAL 294
             MI     +G  E+ + +F+EML  G   D  T V VLS C++ G +  G R       
Sbjct: 396 TSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKN 455

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           +   + E+S    ++D+                                AR G+F  A  
Sbjct: 456 EHQIAPEMSHYACMVDL-------------------------------LARAGLFSEAQE 484

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
             R M    +EPD  A  S+L AC      E+ +   + +   D  +S   S A+ ++Y+
Sbjct: 485 FIRRM---PVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYS-AIANVYS 540

Query: 415 KCGSMADAESVFNQMPVKDI-----VSWNTMIGALDLFVA 449
            CG  +DA  ++     K +      SW  +   + +F A
Sbjct: 541 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGA 580


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/659 (39%), Positives = 380/659 (57%), Gaps = 48/659 (7%)

Query: 183 LYLFKKMQSLGIAAD-SYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
           L   + + S  I+ D  Y  S  +K +    + + V  A K+FDE+ +R+V+  N MI  
Sbjct: 56  LKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRS 115

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y+ NG   +G++VF  M +     D  T   VL  C+  G ++ G+ +H  A K   S  
Sbjct: 116 YVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSST 175

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +   N L+ MY KCG L  A  V ++M  R VVSW S++AGYA+   FD A+ + R M  
Sbjct: 176 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMES 235

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
             I  D   + S+L A            V +   EN M    YV     DM+ K G    
Sbjct: 236 VKISHDAGTMASLLPA------------VSNTTTENVM----YVK----DMFFKMGK--- 272

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACAS 470
                     K +VSWN MIG          A++L+  M  + FEPD V++  +LPAC  
Sbjct: 273 ----------KSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGD 322

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
            +AL  G++IHGYI R  +  +  + NA++DMY KCG L  AR +F+ + ++D++SWT M
Sbjct: 323 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAM 382

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I+ YG  G GCDA+A F+ M+ +G+ PD ++F++ L ACSH+GL++EG   F +M     
Sbjct: 383 ISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYK 442

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           I P+LEH ACMVDLL R G + EAY+FI+ MP+ P+  +WG+LL  CR+H    +    A
Sbjct: 443 ITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAA 502

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
           + +F+L P+ +GYYVLL+N+YA+A +WEEV  +R  +  +GLKKNPG S +E+   ++ F
Sbjct: 503 DKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 562

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
           + G  SHP + +I   L  L  +MK  GY P +  AL + +E +KE  L  HSEKLA+ F
Sbjct: 563 LVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVF 622

Query: 771 GILNLP---AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
            ++N     +   IR+TKNLR+CGDCH  AK +S+   REI++RD+NRFH F+ G CSC
Sbjct: 623 ALMNTEEEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 681



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 193/421 (45%), Gaps = 80/421 (19%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
            +L    DLK+L   + VHS I    +  +   LG KL+  + +  D+   R+VF++I  
Sbjct: 48  QVLDTYPDLKTL---RTVHSRIISEDLRYNSS-LGVKLMRAYASLKDVATARKVFDEIPE 103

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN---SRRV 217
             V I N+++  Y   G ++E + +F  M S  +  D YTF CVLK  +  GN    +++
Sbjct: 104 RNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKI 163

Query: 218 -----------------------------KDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                                         +A  + DE+S RDVVSWN +++GY  N   
Sbjct: 164 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRF 223

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           +  LEV +EM ++  + D  TM ++L   +N                           T 
Sbjct: 224 DDALEVCREMESVKISHDAGTMASLLPAVSN-------------------------TTTE 258

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
             MY K         +F KMG++S+VSW  MI  Y +  +   A+ L+ GM  +G EPD 
Sbjct: 259 NVMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDA 310

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
            +ITS+L AC     L +GK +H YI+   +  +L + NAL+DMYAKCG +  A  VF  
Sbjct: 311 VSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFEN 370

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERG 477
           M  +D+VSW  MI           A+ LF  M  +   PD +     L AC+    LE G
Sbjct: 371 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEG 430

Query: 478 R 478
           R
Sbjct: 431 R 431



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 184/355 (51%), Gaps = 8/355 (2%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T+  +L+ C+   ++  GKK+H    + G+      +G+ LV M+  CG L E R
Sbjct: 138 KPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLS-STLFVGNGLVSMYGKCGFLSEAR 196

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--V 210
            V +++    V  WN L+  Y++   F ++L + ++M+S+ I+ D+ T + +L  ++   
Sbjct: 197 LVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 256

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
             N   VKD   +F ++  + +VSWN MI  Y+ N +  + +E++  M   GF  D  ++
Sbjct: 257 TENVMYVKD---MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSI 313

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +VL  C +  AL  G+ +H +  +      +   N L+DMY+KCG LD A  VFE M  
Sbjct: 314 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKS 373

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R VVSWT+MI+ Y   G    A+ LF  M   G+ PD  A  + L AC+  GLLE G+  
Sbjct: 374 RDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 433

Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
              + ++  +   L     ++D+  + G + +A     +MP++ +   W  ++GA
Sbjct: 434 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGA 488



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 5/151 (3%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  IG + +     +A+E LYS  ++   + D  +  S+L  C D  +L  GKK+H  
Sbjct: 277 SWNVMIGVYMKNAMPVEAVE-LYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 335

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I E   +I + +L + L+ M+  CG L   R VF  + +  V  W  ++  Y  +G   +
Sbjct: 336 I-ERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCD 394

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           ++ LF KMQ  G+  DS  F   L   +  G
Sbjct: 395 AVALFSKMQDSGLVPDSIAFVTTLAACSHAG 425


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 281/809 (34%), Positives = 432/809 (53%), Gaps = 48/809 (5%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSIICES 125
           A I  F + G  E+A+ +      + I    Y   S+L  C  +K  + G+++H+++ + 
Sbjct: 183 AMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKY 242

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
           G  ++  V  + LV ++    +     +VF+K+ +     +N L+   ++ G    +L L
Sbjct: 243 GSSLETYVCNA-LVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALEL 301

Query: 186 FKKMQSLGIAADSYTFSCVLKCLAVVG--------------------------------N 213
           F KM+   +  D  T + +L   A  G                                N
Sbjct: 302 FTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVN 361

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
              +K AH++F      +VV WN M+  +       +   +F++M   G   +  T  ++
Sbjct: 362 CSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSI 421

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L  C + GAL  G  +H   +K  F   +   + L+DMY+K G LD A  +   + E  V
Sbjct: 422 LRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDV 481

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSWT++I+GYA+  +F  A++ F+ M+  GI+ D    +S + ACA    L  G+ +H  
Sbjct: 482 VSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQ 541

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
              +     L + NAL+ +YA+CG + +A   F ++  KD +SWN +I           A
Sbjct: 542 SYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDA 601

Query: 444 LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           L +F  M +   E    T    + A A++A +++G++IH  I++ G  +D  V+NA++  
Sbjct: 602 LKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITF 661

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG +  AR  F  +P K+ +SW  MI GY  HG+G +A+  F  M+Q G  P+ V+F
Sbjct: 662 YAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTF 721

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           + VL ACSH GLV +G  +F  M  E  + PK  HYAC+VDL+SR G LS A +FIE MP
Sbjct: 722 VGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMP 781

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + PDATIW +LL  C +H  V++ E  A+H+ ELEP+++  YVLL+N+YA + KW+   +
Sbjct: 782 IEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQ 841

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
            R+ +  RG+KK PG SWIE+K  V+ F  G   HP A KI   L  L  +    GYF +
Sbjct: 842 TRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYF-Q 900

Query: 743 TRYALINADEME-KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            RY+L+N  E E K+  +  HSEKLA+ FG+L+L     I V KNLRVC DCH   KF+S
Sbjct: 901 DRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVS 960

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K + R I++RD+ RFHHF+ G CSC+ +W
Sbjct: 961 KISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 173/586 (29%), Positives = 278/586 (47%), Gaps = 47/586 (8%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           + +TY  +L LC +  SL + KK+H  I + G   ++ VL +KLV ++   GDL    +V
Sbjct: 9   NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFG-NESVLCNKLVDVYFALGDLDGVVKV 67

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-------- 206
           F  + N  V  W+ ++  + +       L LF  M    ++    +F+ VL+        
Sbjct: 68  FEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIG 127

Query: 207 -----------------CLAVVGN--------SRRVKDAHKLFDELSDRDVVSWNCMISG 241
                            C  ++ N        +  +  A K+FD L  +D VSW  MISG
Sbjct: 128 IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISG 187

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           +  NG  E+ + +F EM   G         +VLSGC        G  +HA   K   S E
Sbjct: 188 FSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLE 247

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
               N L+ +YS+  +   A +VF KM  +  VS+ S+I+G A++G  DGA+ LF  M R
Sbjct: 248 TYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKR 307

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           + ++PD   + S+L ACA +G L  G+ +H Y+ +  + S + V  AL+D+Y  C  +  
Sbjct: 308 DYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKT 367

Query: 422 AESVFNQMPVKDIVSWNTMI---GALD-------LFVAM-LQNFEPDGVTMACILPACAS 470
           A  +F     +++V WN M+   G LD       +F  M ++   P+  T   IL  C S
Sbjct: 368 AHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTS 427

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           + AL+ G +IH  +++ G   +  V + ++DMY K G L  A  +   +   D++SWT +
Sbjct: 428 VGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTAL 487

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I+GY  H    +A+  F +M   GI+ D + F S + AC+    +++G R  +   Y   
Sbjct: 488 ISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQG-RQIHAQSYVSG 546

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
               L     +V L +R G + EAY   E +  A D+  W  L+ G
Sbjct: 547 YSEDLSIGNALVSLYARCGRIKEAYLEFEKID-AKDSISWNGLISG 591



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 159/559 (28%), Positives = 269/559 (48%), Gaps = 59/559 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I    + G  + A+E+    ++   K D  T  S+L  CA   +L  G+++HS +
Sbjct: 281 SFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYV 340

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++GI  D  V G+ L+ ++V C D+K    +F       V +WN+++  + K  N  ES
Sbjct: 341 IKAGISSDMIVEGA-LLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSES 399

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG------------------------------ 212
             +F++MQ  G+  + +T+  +L+    VG                              
Sbjct: 400 FRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDM 459

Query: 213 --NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                ++  AH +   L++ DVVSW  +ISGY  + +  + L+ FKEMLN G   D    
Sbjct: 460 YAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGF 519

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + +S CA   AL  GR +HA +  + +S+++S  N L+ +Y++CG +  A   FEK+  
Sbjct: 520 SSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDA 579

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +  +SW  +I+G+A+ G  + A+++F  M R  +E   +   S + A A    ++ GK +
Sbjct: 580 KDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQI 639

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I +    S + VSNAL+  YAKCGS+ DA   F +MP K+ VSWN MI         
Sbjct: 640 HAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYG 699

Query: 443 --ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYI----LRHGISADRNV 495
             A++LF  M Q  E P+ VT   +L AC+ +  + +G    GY       HG+      
Sbjct: 700 NEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGL---GYFESMSKEHGLVPKPAH 756

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
              +VD+  + G L  AR   + +P + D   W  +++   +H      +  F       
Sbjct: 757 YACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVH--KNVEVGEFAAQHLLE 814

Query: 555 IEPDEVS---FISVLYACS 570
           +EP++ +    +S +YA S
Sbjct: 815 LEPEDSATYVLLSNMYAVS 833



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 226/497 (45%), Gaps = 61/497 (12%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           M + G   +  T + +L  C N G+L+  + +H   LK  F  E    N L+D+Y   GD
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           LDG ++VFE M  RSV SW  +I+G+  + + +  + LF  M+ E + P   +  S+L A
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 378 CACDGL-LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
           C+   + +   + +H  I  + +  S  +SN L+ +YAK G +  A  VF+ +  KD VS
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180

Query: 437 WNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYIL 485
           W  MI           A+ LF  M      P     + +L  C  +   + G ++H  + 
Sbjct: 181 WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVF 240

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
           ++G S +  V NA+V +Y +    V A  +F  + +KD +S+  +I+G    GF   A+ 
Sbjct: 241 KYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALE 300

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM-------------------- 585
            F  M++  ++PD V+  S+L AC+ +G + +G +  + +                    
Sbjct: 301 LFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYV 360

Query: 586 -------RYECNIEPKLEH---YACMVDLLSRTGNLSEAYRFIEMMPVA---PDATIWGS 632
                   +E  +  + E+   +  M+    +  NLSE++R    M +    P+   + S
Sbjct: 361 NCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPS 420

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGY----YV--LLANVYAEAEKWEEVKKLREK 686
           +L  C     + L E++   V +     TG+    YV  +L ++YA+  K +        
Sbjct: 421 ILRTCTSVGALDLGEQIHTQVIK-----TGFQFNVYVCSVLIDMYAKHGKLDTA-----H 470

Query: 687 ISRRGLKKNPGCSWIEI 703
           +  R L ++   SW  +
Sbjct: 471 VILRTLTEDDVVSWTAL 487


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 229/570 (40%), Positives = 362/570 (63%), Gaps = 12/570 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++++ CA   +L   RA+HA    + F+  +  +N+L+ +Y KCG +  A RVF+ M  R
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            + SWTS+IAGYA+  + D A+ L  GM+R   +P+ +   S+L A        IG+ +H
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------- 443
               + D    +YV +AL+DMYA+CG M  A +VF+Q+  K+ VSWN +I          
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 444 --LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             L +F  M +N FE    T + +  A A + ALE+G+ +H ++++ G      V N I+
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY K G ++ AR +FD +  KD+++W  M+  +  +G G +A+  F +MR+ G+  +++
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+S+L ACSH GLV EG ++F+MM+ E N+EP+++HY  +VDLL R G L++A  FI  
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ P A +WG+LL  CR+H   K+ +  A+HVFEL+PD+TG  VLL N+YA   +W+  
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            ++R+ +   G+KK P CSW+EI+  V++FVA   +HP +++I    + + +++++ GY 
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYV 547

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T Y L++ DE E++  L  HSEK+A+AF ++N+P G TIR+ KN+R+CGDCH   +++
Sbjct: 548 PNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYI 607

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK  +REIV+RD+NRFHHF  G CSC  +W
Sbjct: 608 SKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 224/503 (44%), Gaps = 85/503 (16%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + Y S++  CA  +SL+D + +H+ +            GS+                   
Sbjct: 65  RLYHSLITACARYRSLDDARAIHAHLA-----------GSQFA----------------- 96

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
               G VF+ N L+H Y K G                                       
Sbjct: 97  ----GSVFLDNSLIHLYCKCGA-------------------------------------- 114

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V DA ++FD +  RD+ SW  +I+GY  N + ++ L +   ML   F  +  T  ++L  
Sbjct: 115 VADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKA 174

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
                +   G  +HA  +K  +  ++   + LLDMY++CG +D AI VF+++  ++ VSW
Sbjct: 175 AGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSW 234

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++IAG+AR+G  +  + +F  M R G E   +  +S+  A A  G LE GK VH ++ +
Sbjct: 235 NALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIK 294

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQN 453
           +  + S +V N ++DMYAK GSM DA  VF+++  KD+V+WN+M+ A     L    + +
Sbjct: 295 SGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTH 354

Query: 454 FEP--------DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           FE         + +T   IL AC+    ++ G++    +  + +  + +    +VD+  +
Sbjct: 355 FEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGR 414

Query: 506 CGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
            G+L  A      +P K   + W  ++    MH      I  F       ++PD+     
Sbjct: 415 AGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNA--KIGQFAADHVFELDPDDTGPPV 472

Query: 565 VLYAC-SHSGLVDEGWRFFNMMR 586
           +LY   + +G  D   R   MM+
Sbjct: 473 LLYNIYASTGQWDAAARVRKMMK 495


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/656 (38%), Positives = 377/656 (57%), Gaps = 45/656 (6%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  LF  + + + V WN MI G  ++      LE +  M++ G   +  T  ++   C  
Sbjct: 81  ALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTK 140

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL--------------------- 318
                 G+ VHA  LK         + +L++MY++ G+L                     
Sbjct: 141 IRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTAL 200

Query: 319 ----------DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
                     D A  +F+++  R VVSW +MI+GYA+ G  + A+  F  M R  + P+V
Sbjct: 201 ITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNV 260

Query: 369 YAITSILHACACDGL-LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
             + S+L ACA  G  L++G  V  +I++  + S++ + N L+DMY KCG + +A ++F 
Sbjct: 261 STMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFE 320

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALER 476
           ++  K++VSWN MIG          AL LF  M+Q N +P+ VT   ILPACA+L AL+ 
Sbjct: 321 KIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDL 380

Query: 477 GREIHGYILRHGISADRNVA--NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           G+ +H Y+ ++  S    VA   +++DMY KCG L +A+ +FD +  K L +W  MI+G+
Sbjct: 381 GKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGF 440

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
            MHG    A+  F+ M   G  PD+++F+ VL AC H+GL+  G R+F+ M  +  + PK
Sbjct: 441 AMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPK 500

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
           L HY CM+DL  R G   EA   ++ M + PD  IW SLL  CRIH  ++LAE VA+H+F
Sbjct: 501 LPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLF 560

Query: 655 ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG 714
           ELEP+N   YVLL+N+YA A +WE+V K+R +++   +KK PGCS IE+   V+ F+ G 
Sbjct: 561 ELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGD 620

Query: 715 SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
             HP + +I  +L  + + +++ G+ P T   L + DE  KE  L  HSEKLA+AFG+++
Sbjct: 621 KVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLIS 680

Query: 775 LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              G TIR+ KNLRVCG+CH   K +SK   REI+ RD NRFHHFKDG CSC+ +W
Sbjct: 681 TKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 166/581 (28%), Positives = 265/581 (45%), Gaps = 96/581 (16%)

Query: 9   TTNFLFFSPPNQSYGKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNA 68
           T   L FS P+  Y  K     PS   + + S   +  T+  I + I KT +  T    +
Sbjct: 10  TLQVLSFSDPSPPY--KLVHDHPS---LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALS 64

Query: 69  EIGRFCEV---GNLEKAMEV------------------LYSSEK---------------S 92
           ++  FC V   G+L  A+ +                  L SSE                +
Sbjct: 65  KLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGT 124

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + +  T+ SI + C  ++   +GK+VH+ + + G+   +  + + L+ M+   G+L   R
Sbjct: 125 EPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLE-HNAFVHTSLINMYAQNGELVNAR 183

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            VF+K        +  L+  Y+  G   E                               
Sbjct: 184 LVFDKSSMRDAVSFTALITGYASKGFLDE------------------------------- 212

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
                  A +LFDE+  RDVVSWN MISGY  +G  E+ +  F+EM       +++TM++
Sbjct: 213 -------ARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLS 265

Query: 273 VLSGCANCG-ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           VLS CA  G +L  G  V ++         I   N L+DMY KCGDL+ A  +FEK+ ++
Sbjct: 266 VLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK 325

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           +VVSW  MI GY     +  A+ LFR M++  I+P+     SIL ACA  G L++GK VH
Sbjct: 326 NVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVH 385

Query: 392 DYIKEN--DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
            Y+ +N   M++++ +  +L+DMYAKCG +A A+ +F+ M  K + +WN MI        
Sbjct: 386 AYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGH 445

Query: 443 ---ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVAN 497
              AL LF  M  + F PD +T   +L AC     L  GR     +++ + +S       
Sbjct: 446 TDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYG 505

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
            ++D++ + G+   A +L   +  K D   W  ++    +H
Sbjct: 506 CMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIH 546



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 127/280 (45%), Gaps = 44/280 (15%)

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYA--KCGSMADAESVFNQMPVKDIVSWNTMI 441
           L+  K +H  I +  + ++ +  + L++  A    G ++ A S+F  +   + V WN MI
Sbjct: 41  LQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMI 100

Query: 442 G----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      AL+ +V M+ +  EP+  T   I  +C  +     G+++H ++L+ G+ 
Sbjct: 101 RGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLE 160

Query: 491 ADRNVANAIVDMYVKCGVLV-------------------------------LARSLFDMI 519
            +  V  ++++MY + G LV                                AR LFD I
Sbjct: 161 HNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEI 220

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
           P +D++SW  MI+GY   G   +A+A F +MR+A + P+  + +SVL AC+ SG   +  
Sbjct: 221 PVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLG 280

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            +      +  +   +     ++D+  + G+L EA    E
Sbjct: 281 NWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFE 320


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 286/821 (34%), Positives = 434/821 (52%), Gaps = 118/821 (14%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVTCG 146
           SS+     +  Y S LQ     K    GK +H+ I ++G+ +  GV L + L+  +   G
Sbjct: 5   SSQILTSPSDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHL--GVFLMNNLMNFYAKTG 62

Query: 147 DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
            + +  RVF+++    VF WN+++  Y+K G                             
Sbjct: 63  FIYDAHRVFDEMPVKSVFSWNIILSGYAKGG----------------------------- 93

Query: 207 CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                    R+++AH++F+E+ + D VSW  MI GY   G  E  + +F+EM++      
Sbjct: 94  ---------RLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPT 144

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD--------- 317
             T+  VL+ CA    L  GR VH+F +K   S  IS  N+LL+MY+K GD         
Sbjct: 145 QFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFD 204

Query: 318 ----------------------LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
                                 +D A   FE+M ER VVSW +MI+GY + G    A+ +
Sbjct: 205 RMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDI 264

Query: 356 FRGMVREGI-EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           F  M+ +   +PD + + S L ACA    L++GK +H +I   +  +   V NAL+ MY+
Sbjct: 265 FSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYS 324

Query: 415 KCGSMADAESV---------------------------------FNQMPVKDIVSWNTMI 441
           K G +  A+ +                                 F+ + V+D+V+W  MI
Sbjct: 325 KSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMI 384

Query: 442 ----------GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      A++LF +M+ +  +P+  T+A +L   +SLA+L+ GR+IH    R G +
Sbjct: 385 VGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNA 444

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHGFGCDAIATFND 549
           +  +V+NA++ MY K G +  AR +F++I  K D I+WT MI     HG G +A+  F  
Sbjct: 445 SSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFER 504

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M + GI+PD ++++ VL AC+H GLV++G  ++N+M+    I P   HYACM+DL  R G
Sbjct: 505 MLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAG 564

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
            L EA+ FIE MP+ PD   WGSLL  C++H  V+LAE  AE +  +EP+N+G Y  LAN
Sbjct: 565 LLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALAN 624

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           VY+   +WE    +R+ +  +G+KK+ G SW++IK KV+IF      HP    I  ++ +
Sbjct: 625 VYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAK 684

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
           +  E+K+ G+ P T   L + +E  KE  L  HSEKLA+AFG++  P   T+R+ KNLRV
Sbjct: 685 IWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRV 744

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           C DCH   KF+SK   REI++RD+ RFHHFK+G CSCR +W
Sbjct: 745 CNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 243/523 (46%), Gaps = 89/523 (17%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + ++G  E A+ +     S+       T  ++L  CA ++ L  G+KVHS +
Sbjct: 112 SWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFV 171

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+     V  S L+ M+   GD    + VF+++       WN ++  + ++G     
Sbjct: 172 VKHGLSSYISVANS-LLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSG----- 225

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                             V  A   F+++ +RDVVSWN MISGY
Sbjct: 226 ---------------------------------LVDLAQVQFEQMIERDVVSWNAMISGY 252

Query: 243 IANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
             +G   + L++F +ML +     D  T+ + LS CAN   L  G+ +HA  ++  F   
Sbjct: 253 NQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTF 312

Query: 302 ISFNNTLLDMYSKCG---------------------------------DLDGAIRVFEKM 328
            +  N L+ MYSK G                                 D++ A R+F+ +
Sbjct: 313 GAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSL 372

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             R VV+WT+MI GY + G    A+ LFR M++EG +P+ Y + ++L   +    L+ G+
Sbjct: 373 RVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGR 432

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI------ 441
            +H     +   SS+ VSNAL+ MYAK GS+ DA  VFN +  K D ++W +MI      
Sbjct: 433 QIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQH 492

Query: 442 ----GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNV 495
                AL LF  ML+N  +PD +T   +L AC  +  +E+GR  +  +   H I    + 
Sbjct: 493 GLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSH 552

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
              ++D++ + G+L  A +  + +P + D+I+W  ++A   +H
Sbjct: 553 YACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVH 595



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 95/463 (20%), Positives = 170/463 (36%), Gaps = 154/463 (33%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS- 120
           ++NA I  + + G   +A+++   +     SK D  T  S L  CA+L++L+ GK++H+ 
Sbjct: 244 SWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAH 303

Query: 121 -------------------------------IICESGIVIDDGVLGSKLVFMFVTCGDLK 149
                                          II +S I   D +  + L+  +V  GD+ 
Sbjct: 304 IIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDIN 363

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK--- 206
             RR+F+ +    V  W  ++  Y + G  ++++ LF+ M   G   ++YT + +L    
Sbjct: 364 PARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSS 423

Query: 207 -----------------------------CLAVVGNSRRVKDAHKLFDELS-DRDVVSWN 236
                                         + +   S  + DA  +F+ +   RD ++W 
Sbjct: 424 SLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWT 483

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL------------- 283
            MI     +G+ E+ L +F+ ML  G   D  T V VLS C + G +             
Sbjct: 484 SMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNA 543

Query: 284 ---------------MFGRA-----VHAFA---------------LKACFSK------EI 302
                          +FGRA      HAF                L +C         E+
Sbjct: 544 HKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEV 603

Query: 303 SFNNTLL-------------DMYSKCGDLDGAIRVFEKMGERSV-----VSWTSM----- 339
           +    LL             ++YS CG  + A  + + M ++ V      SW  +     
Sbjct: 604 AAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVH 663

Query: 340 IAGY------AREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
           I G        R+ +++   ++++ + + G  PD     S+LH
Sbjct: 664 IFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDT---ESVLH 703


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/812 (34%), Positives = 438/812 (53%), Gaps = 96/812 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSK---IDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  +  + + G    AME   S  +S     +  T+   ++ C  L   E   ++  +
Sbjct: 128 SWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGL 187

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           + + G   D  V  + +V MFV CG +    + F++I+   VF  N ++  Y+K      
Sbjct: 188 LTKFGFQGDPDV-ATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAK------ 240

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
                                           S  V  A +LF+ + +RDVVSWN M+S 
Sbjct: 241 --------------------------------SYGVDHALELFESMPERDVVSWNMMVSA 268

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
              +G A + L V  +M N G  +D  T  + L+ CA   +L +G+ +HA  +++    +
Sbjct: 269 LSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCID 328

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
               + ++++Y+KCG    A RVF  + +R+ VSWT +I G+ + G F  ++ LF  M  
Sbjct: 329 PYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRA 388

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           E +  D +A+ +I+  C+    + + + +H    ++    ++ +SN+L+ MYAKCG++ +
Sbjct: 389 ELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQN 448

Query: 422 AESVFNQMPVKDIVSW-------------------------------NTMIGA------- 443
           AES+F+ M  +DIVSW                               N M+GA       
Sbjct: 449 AESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAE 508

Query: 444 ---LDLFVAML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              L ++ AML  ++  PD VT   +   CA + A + G +I G+ ++ G+  D +V NA
Sbjct: 509 EDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNA 568

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           ++ MY KCG +  AR +FD +  KDL+SW  MI GY  HG G  AI  F+DM + G +PD
Sbjct: 569 VITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPD 628

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            +S+++VL +CSHSGLV EG  +F+M++ + N+ P LEH++CMVDLL+R GNL EA   I
Sbjct: 629 YISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLI 688

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           + MP+ P A +WG+LL  C+ H   +LAE  A+H+F+L+  ++G Y+LLA +YA+A K  
Sbjct: 689 DEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSV 748

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           +  ++R+ +  +G+KKNPG SW+E+K KV++F A   SHP    I   L  L  ++ + G
Sbjct: 749 DSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLG 808

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
           Y        +  + +  E+    HSEKLA+AFGI+NLPA   I + KNLR+CGDCH + K
Sbjct: 809 Y--------VRTESLRSEIH---HSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIK 857

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +S    RE V+RD+ RFHHFK G CSC  +W
Sbjct: 858 LISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 195/386 (50%), Gaps = 44/386 (11%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T ++   IG F + G   +++E+     +E   +D     +I+  C++   +   +++HS
Sbjct: 360 TVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHS 419

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           +  +SG      V+ + L+ M+  CG+L+    +F+ ++   +  W  ++  YS+ GN  
Sbjct: 420 LSLKSGHT-RAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGN-- 476

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                         +G +R      + FD +S R+V++WN M+ 
Sbjct: 477 ------------------------------IGKAR------EFFDGMSTRNVITWNAMLG 500

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
            YI +G  E GL+++  ML     + D  T VT+  GCA+ GA   G  +    +K    
Sbjct: 501 AYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLI 560

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            + S  N ++ MYSKCG +  A ++F+ +  + +VSW +MI GY++ G+   AI +F  M
Sbjct: 561 LDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDM 620

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGS 418
           +++G +PD  +  ++L +C+  GL++ GK   D +K ++++   L   + ++D+ A+ G+
Sbjct: 621 LKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGN 680

Query: 419 MADAESVFNQMPVKDIVS-WNTMIGA 443
           + +A+++ ++MP+K     W  ++ A
Sbjct: 681 LIEAKNLIDEMPMKPTAEVWGALLSA 706



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 143/591 (24%), Positives = 253/591 (42%), Gaps = 99/591 (16%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           VF+ N L+H Y   G   ++  L +   +     +  T + ++   A +G+   + DA +
Sbjct: 63  VFLQNTLLHAYLSCGALPDARGLLRGDIT---EPNVITHNIMMNGYAKLGS---LSDAEE 116

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA--NC 280
           LF  +  RDV SWN ++SGY  +G     +E F  M   G ++  A       GCA  +C
Sbjct: 117 LFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTF----GCAMKSC 172

Query: 281 GALMFGR-AVHAFAL--KACFSKEISFNNTLLDMYSKCG--------------------- 316
           GAL +   A+    L  K  F  +      ++DM+ +CG                     
Sbjct: 173 GALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRN 232

Query: 317 ----------DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
                      +D A+ +FE M ER VVSW  M++  ++ G    A+ +   M   G+  
Sbjct: 233 SMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRL 292

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D    TS L ACA    L  GK +H  +  +      YV++A++++YAKCG   +A  VF
Sbjct: 293 DSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVF 352

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAMLQNF-EPDGVTMACILPACASLAALE 475
           + +  ++ VSW  +IG          +L+LF  M       D   +A I+  C++   + 
Sbjct: 353 SSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMC 412

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
             R++H   L+ G +    ++N+++ MY KCG L  A S+F  +  +D++SWT M+  Y 
Sbjct: 413 LARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYS 472

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
             G    A   F+ M    +    +++ ++L A    G  ++G + ++ M  E ++ P  
Sbjct: 473 QVGNIGKAREFFDGMSTRNV----ITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDW 528

Query: 596 EHYACM-----------------------------------VDLLSRTGNLSEAYRFIEM 620
             Y  +                                   + + S+ G +SEA +  + 
Sbjct: 529 VTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDF 588

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLAN 669
           +    D   W +++ G   H   K A ++ + + +   +PD   Y  +L++
Sbjct: 589 LS-RKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSS 638



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 169/356 (47%), Gaps = 52/356 (14%)

Query: 264 NVDLATMV----TVLSGCANCGALMFGRAVHAFALKACFSK-EISFNNTLLDMYSKCGDL 318
           +V LA+ V    T+L    +CGAL   R +    L+   ++  +  +N +++ Y+K G L
Sbjct: 56  SVGLASAVFLQNTLLHAYLSCGALPDARGL----LRGDITEPNVITHNIMMNGYAKLGSL 111

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE-PDVYAITSILHA 377
             A  +F +M  R V SW ++++GY + G F  A+  F  M R G   P+ +     + +
Sbjct: 112 SDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKS 171

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ--------- 428
           C   G  E+   +   + +   Q    V+  ++DM+ +CG++  A   F+Q         
Sbjct: 172 CGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCR 231

Query: 429 ----------------------MPVKDIVSWNTMIGALD--------LFVAM-LQN--FE 455
                                 MP +D+VSWN M+ AL         L VA+ + N    
Sbjct: 232 NSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVR 291

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
            D  T    L ACA L++L  G+++H  ++R     D  VA+A+V++Y KCG    AR +
Sbjct: 292 LDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRV 351

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           F  +  ++ +SWT++I G+  +G   +++  FN MR   +  D+ +  +++  CS+
Sbjct: 352 FSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSN 407



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 150/329 (45%), Gaps = 57/329 (17%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           +V  G+   V+   ++LHA    G L    D    ++ +  + ++   N +M+ YAK GS
Sbjct: 54  LVSVGLASAVFLQNTLLHAYLSCGAL---PDARGLLRGDITEPNVITHNIMMNGYAKLGS 110

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE--PDGVTMACILP 466
           ++DAE +F +MP +D+ SWNT++           A++ FV+M ++ +  P+  T  C + 
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR------------- 513
           +C +L   E   ++ G + + G   D +VA  IVDM+V+CG +  A              
Sbjct: 171 SCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFC 230

Query: 514 ------------------SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
                              LF+ +P +D++SW +M++     G   +A++   DM   G+
Sbjct: 231 RNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGV 290

Query: 556 EPDEVSFISVLYACSHSGLVDEGW---RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
             D  ++ S L AC+   L   GW       ++R    I+P +   + MV+L ++ G   
Sbjct: 291 RLDSTTYTSSLTACAK--LSSLGWGKQLHAQVIRSLPCIDPYVA--SAMVELYAKCGCFK 346

Query: 613 EAYRFIEMM----PVAPDATIWGSLLCGC 637
           EA R    +     V+    I G L  GC
Sbjct: 347 EARRVFSSLRDRNTVSWTVLIGGFLQYGC 375



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 59/301 (19%), Positives = 121/301 (40%), Gaps = 42/301 (13%)

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS------ 514
           +A  L +C +  AL   R +HG ++  G+++   + N ++  Y+ CG L  AR       
Sbjct: 31  LADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDI 90

Query: 515 --------------------------LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
                                     LF  +P +D+ SW  +++GY   G   DA+ +F 
Sbjct: 91  TEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFV 150

Query: 549 DMRQAGIE-PDEVSFISVLYACSHSGLVDEGWRFFNMM-RYECNIEPKLEHYACMVDLLS 606
            MR++G   P+  +F   + +C   G  +   +   ++ ++    +P +     +VD+  
Sbjct: 151 SMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVA--TGIVDMFV 208

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD-NTGYYV 665
           R G +  A +    +   P      S+L G    + V  A +    +FE  P+ +   + 
Sbjct: 209 RCGAVDFASKQFSQIE-RPTVFCRNSMLAGYAKSYGVDHALE----LFESMPERDVVSWN 263

Query: 666 LLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIES 725
           ++ +  +++ +  E   +   +  RG++ +       +     +   G     HA+ I S
Sbjct: 264 MMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRS 323

Query: 726 L 726
           L
Sbjct: 324 L 324


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/778 (35%), Positives = 418/778 (53%), Gaps = 48/778 (6%)

Query: 100 CSILQLCADLKSLED---GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           C+   L   LK + D   G +VH++   +G    D  + + LV M+   G + + RRVFN
Sbjct: 101 CNEFALPVVLKCVPDARLGAQVHAMAMATGFG-SDVFVANALVAMYGGFGFMDDARRVFN 159

Query: 157 KIDNGKVFI-WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR 215
           + D+ +  + WN LM  Y K     +++ +F +M   GI    + FSCV+       N  
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE 219

Query: 216 --------------------------------RVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                           RV  A  +F+++ D DVVSWN +ISG +
Sbjct: 220 AGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            NG   + +E+  +M   G   ++ T+ ++L  C+  GA   GR +H F +KA    +  
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY 339

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               L+DMY+K   LD A +VF+ M  R ++   ++I+G +  G  D A+ LF  + +EG
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG 399

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           +  +   + ++L + A        + VH    +       +V N L+D Y KC  ++DA 
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDAN 459

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVTMACILPACASLA 472
            VF +    DI++  +MI          GA+ LF+ ML +  EPD   ++ +L ACASL+
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           A E+G+++H ++++    +D    NA+V  Y KCG +  A   F  +P + ++SW+ MI 
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIG 579

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           G   HG G  A+  F  M   GI P+ ++  SVL AC+H+GLVDE  R+FN M+    I+
Sbjct: 580 GLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGID 639

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
              EHY+CM+DLL R G L +A   +  MP   +A+IWG+LL   R+H + +L +  AE 
Sbjct: 640 RTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEK 699

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           +F LEP+ +G +VLLAN YA A  W EV K+R+ +    +KK P  SWIE+K KV+ F+ 
Sbjct: 700 LFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIV 759

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  SHP  K+I + L  L   M + G+ P     L + D  EKE+ L  HSE+LA+AF +
Sbjct: 760 GDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFAL 819

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           L+ P G  IRV KNLR+C DCH   KF+SK   REI++RD NRFHHF+DG CSC  +W
Sbjct: 820 LSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 229/484 (47%), Gaps = 46/484 (9%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           +  ++  C   +++E G++VH+++   G    D    + LV M++  G +     +F K+
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMG-YDKDVFTANALVDMYMKMGRVDIASVIFEKM 263

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------ 212
            +  V  WN L+      G+   ++ L  +M+  G+  + +T S +LK  +  G      
Sbjct: 264 PDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGR 323

Query: 213 --------------------------NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                                      +  + DA K+FD +  RD++  N +ISG    G
Sbjct: 324 QIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGG 383

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
             ++ L +F E+   G  V+  T+  VL   A+  A    R VHA A+K  F  +    N
Sbjct: 384 RHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVN 443

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L+D Y KC  L  A RVFE+     +++ TSMI   ++    +GAI+LF  M+R+G+EP
Sbjct: 444 GLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEP 503

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D + ++S+L+ACA     E GK VH ++ +    S  +  NAL+  YAKCGS+ DAE  F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALE 475
           + +P + +VSW+ MIG          AL+LF  M+ +   P+ +TM  +L AC     ++
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623

Query: 476 RGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAG 533
             +     +    GI       + ++D+  + G L  A  L + +P +   S W  ++  
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683

Query: 534 YGMH 537
             +H
Sbjct: 684 SRVH 687



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 153/576 (26%), Positives = 259/576 (44%), Gaps = 71/576 (12%)

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           RR   A + FDE+ D   VSW+ +++ Y  NG+    ++ F  M   G   +   +  VL
Sbjct: 51  RRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL 110

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF-EKMGERSV 333
               +      G  VHA A+   F  ++   N L+ MY   G +D A RVF E   ER+ 
Sbjct: 111 KCVPDA---RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNA 167

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSW  +++ Y +      AI++F  MV  GI+P  +  + +++AC     +E G+ VH  
Sbjct: 168 VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAM 227

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           +        ++ +NAL+DMY K G +  A  +F +MP  D+VSWN +I           A
Sbjct: 228 VVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRA 287

Query: 444 LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           ++L + M      P+  T++ IL AC+   A + GR+IHG++++    +D  +   +VDM
Sbjct: 288 IELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 347

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y K   L  AR +FD +  +DLI    +I+G    G   +A++ F ++R+ G+  +  + 
Sbjct: 348 YAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTL 407

Query: 563 ISVLYACSH--------------------------SGLVDEGWRF-----FNMMRYECNI 591
            +VL + +                           +GL+D  W+       N +  EC+ 
Sbjct: 408 AAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSS 467

Query: 592 EPKLEHYAC--MVDLLSRTGNLSEAYR-FIEMM--PVAPDATIWGSLLCGCRIHHEVKLA 646
              +   AC  M+  LS+  +   A + F+EM+   + PD  +  SLL  C      +  
Sbjct: 468 GDII---ACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 524

Query: 647 EKVAEHVFELEPDNTGYY-VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
           ++V  H+ + +  +  +    L   YA+    E+ +     +  RG+      SW     
Sbjct: 525 KQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGV-----VSW----- 574

Query: 706 KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
             +  + G + H H K+   L  R    M  EG  P
Sbjct: 575 --SAMIGGLAQHGHGKRALELFGR----MVDEGINP 604



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 191/381 (50%), Gaps = 19/381 (4%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+   L+  A   AL+ G  +HA  LK+      SF N L+  YSKC     A R F+++
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKS--GSLASFRNHLISFYSKCRRPCCARRFFDEI 63

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            +   VSW+S++  Y+  G+   AI+ F GM  EG+  + +A+  +L  C  D  L  G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL-KCVPDARL--GA 120

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIG----- 442
            VH         S ++V+NAL+ MY   G M DA  VFN+    ++ VSWN ++      
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 443 -----ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                A+ +F  M+    +P     +C++ AC     +E GR++H  ++R G   D   A
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           NA+VDMY+K G + +A  +F+ +P  D++SW  +I+G  ++G    AI     M+ +G+ 
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           P+  +  S+L ACS +G  D G +    M  + N +        +VD+ ++   L +A +
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFM-IKANADSDDYIGVGLVDMYAKNHFLDDARK 359

Query: 617 FIEMMPVAPDATIWGSLLCGC 637
             + M    D  +  +L+ GC
Sbjct: 360 VFDWM-FHRDLILCNALISGC 379



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 200/417 (47%), Gaps = 41/417 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I      G+  +A+E+L   + S +  +  T  SIL+ C+   + + G+++H  +
Sbjct: 270 SWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++    DD  +G  LV M+     L + R+VF+ + +  + + N L+   S  G   E+
Sbjct: 330 IKANADSDD-YIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEA 388

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSRRV---------------------- 217
           L LF +++  G+  +  T + VLK    L     +R+V                      
Sbjct: 389 LSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDS 448

Query: 218 -------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                   DA+++F+E S  D+++   MI+        E  +++F EML  G   D   +
Sbjct: 449 YWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++L+ CA+  A   G+ VHA  +K  F  +    N L+  Y+KCG ++ A   F  + E
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R VVSW++MI G A+ G    A+ LF  MV EGI P+   +TS+L AC   GL++  K  
Sbjct: 569 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628

Query: 391 HDYIKEN---DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +KE    D     Y  + ++D+  + G + DA  + N MP +   S W  ++GA
Sbjct: 629 FNSMKEMFGIDRTEEHY--SCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/654 (39%), Positives = 382/654 (58%), Gaps = 45/654 (6%)

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANC 280
           K+FD++   ++ +WN +I  + ++    +GL VF +ML+      +  T   V+      
Sbjct: 85  KVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEV 144

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
            +L+ G+A+H   +KA F  ++  +N+L+  YS  GDLD A  VF K+ E+ +VSW SMI
Sbjct: 145 SSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMI 204

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
           +G+ + G  + A++LF+ M  E   P+   +  +L ACA    LE G+   DYI+ N + 
Sbjct: 205 SGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGID 264

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------------------ 442
            +L +SNA++DMY KCGS+ DA  +F++M  KDIVSW TMI                   
Sbjct: 265 INLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVM 324

Query: 443 -----------------------ALDLF--VAMLQNFEPDGVTMACILPACASLAALERG 477
                                  AL +F  + + +N +P+ VT+A  L ACA L A++ G
Sbjct: 325 PREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG 384

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
             IH YI + GI  + ++  +++DMY KCG L  A  +F  +  +D+  W+ MIAG  MH
Sbjct: 385 GWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMH 444

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G G  AI  F+ M++  ++P+ V+F ++L ACSHSGLVDEG  FFN MR    + P  +H
Sbjct: 445 GHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKH 504

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           YACMVD+L R G L EA   IE MP+ P A++WG+LL  CRI+  V+LAE     + E +
Sbjct: 505 YACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETD 564

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
            +N G YVLL+N+YA+A KW+ V +LR+ +   GL+K PGCS IE+ G ++ F+ G +SH
Sbjct: 565 SNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSH 624

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYAL-INADEMEKEVALCGHSEKLAMAFGILNLP 776
           P + +I S L  +   +K  GY     + L    +E  KE AL  HSEKLA+A+G++ + 
Sbjct: 625 PLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRME 684

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             Q IR+ KNLRVCGDCH +AK +SK   R+I+LRD  RFHHF  G CSC  +W
Sbjct: 685 PSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 187/389 (48%), Gaps = 46/389 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  F + G+ E+A+++      E ++ +  T   +L  CA    LE G+     I
Sbjct: 199 SWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYI 258

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +GI I+  +L + ++ M+V CG L++ RR+F+K++   +  W  ++  Y+K G++   
Sbjct: 259 ERNGIDIN-LILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDA- 316

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                                A ++FD +   D+ +WN +IS Y
Sbjct: 317 -------------------------------------ARRVFDVMPREDITAWNALISSY 339

Query: 243 IANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
             NG  ++ L +F+E+ LN     +  T+ + L+ CA  GA+  G  +H +  K      
Sbjct: 340 QQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLN 399

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
                +L+DMYSKCG L+ A+ VF  +  R V  W++MIAG A  G    AI LF  M  
Sbjct: 400 FHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQE 459

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE--NDMQSSLYVSNALMDMYAKCGSM 419
             ++P+    T++L AC+  GL++ G+   + ++     +  S + +  ++D+  + G +
Sbjct: 460 TKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYA-CMVDILGRAGCL 518

Query: 420 ADAESVFNQMPVKDIVS-WNTMIGALDLF 447
            +A  +  +MP+    S W  ++GA  ++
Sbjct: 519 EEAVELIEKMPIVPSASVWGALLGACRIY 547



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 195/419 (46%), Gaps = 51/419 (12%)

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM--YSKCGDLDGAIRVF 325
           +T+  ++  CAN   L   + +HA  L+     +      L      S    LD A +VF
Sbjct: 31  STVPILIDKCANKKHL---KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVF 87

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE-PDVYAITSILHACACDGLL 384
           +++   ++ +W ++I  +A        + +F  M+ E    P+ Y    ++ A      L
Sbjct: 88  DQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSL 147

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
             G+ +H  + +    S L++SN+L+  Y+  G +  A  VF+++  KDIVSWN+MI   
Sbjct: 148 LAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGF 207

Query: 443 --------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                   AL LF  M ++N  P+ VTM  +L ACA    LE GR    YI R+GI  + 
Sbjct: 208 VQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINL 267

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG------------------ 535
            ++NA++DMYVKCG L  AR LFD +  KD++SWT MI GY                   
Sbjct: 268 ILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPRE 327

Query: 536 -------------MHGFGCDAIATFNDMR-QAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
                         +G   +A+A F +++     +P+EV+  S L AC+  G +D G   
Sbjct: 328 DITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWI 387

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
              ++ +  I+        ++D+ S+ G+L +A      +    D  +W +++ G  +H
Sbjct: 388 HVYIKKQ-GIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSAMIAGLAMH 444


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/688 (38%), Positives = 400/688 (58%), Gaps = 48/688 (6%)

Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
           M   G  +D Y+ S  L  +A + +   ++ A K+FDE+   +  +WN +I  Y +    
Sbjct: 53  MIRTGTFSDPYSAS-KLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDP 111

Query: 249 EKGLEVFKEMLNLGF-NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
              +  F +M++      +  T   ++   A   +L  G+++H  A+K+    ++   N+
Sbjct: 112 VLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANS 171

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L+  Y  CGDLD A +VF  + E+ VVSW SMI G+ ++G  D A+ LF+ M  E ++  
Sbjct: 172 LIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKAS 231

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF- 426
              +  +L ACA    LE G+ V  YI+EN +  +L ++NA++DMY KCGS+ DA+ +F 
Sbjct: 232 HVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFD 291

Query: 427 ------------------------------NQMPVKDIVSWNTMIGA----------LDL 446
                                         N MP KDIV+WN +I A          L +
Sbjct: 292 AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIV 351

Query: 447 F--VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           F  + + +N + + +T+   L ACA + ALE GR IH YI +HGI  + +V +A++ MY 
Sbjct: 352 FHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYS 411

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG L  +R +F+ +  +D+  W+ MI G  MHG G +A+  F  M++A ++P+ V+F +
Sbjct: 412 KCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 471

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           V  ACSH+GLVDE    F+ M     I P+ +HYAC+VD+L R+G L +A +FIE MP+ 
Sbjct: 472 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 531

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           P  ++WG+LL  C+IH  + LAE     + ELEP N G +VLL+N+YA+  KWE V +LR
Sbjct: 532 PSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELR 591

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
           + +   GLKK PGCS IEI G ++ F++G ++HP ++K+   L  +  ++K  GY P+  
Sbjct: 592 KHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEIS 651

Query: 745 YAL--INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
             L  I  +EM KE +L  HSEKLA+ +G+++  A + IRV KNLRVCGDCH +AK +S+
Sbjct: 652 QVLQIIEEEEM-KEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQ 710

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REI++RD  RFHHF++G+CSC  FW
Sbjct: 711 LYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 237/520 (45%), Gaps = 84/520 (16%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM--FVTCGDLKEGRRVFN 156
           + S+++ C  L+ L   K+ H  +  +G    D    SKL  M    +   L+  R+VF+
Sbjct: 33  HISLIERCVSLRQL---KQTHGHMIRTG-TFSDPYSASKLFAMAALSSFASLEYARKVFD 88

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA-ADSYTFSCVLKCLAVVGNSR 215
           +I     F WN L+  Y+   +   S++ F  M S      + YTF  ++K  A V +  
Sbjct: 89  EIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLS 148

Query: 216 RVKDAH--------------------------------KLFDELSDRDVVSWNCMISGYI 243
             +  H                                K+F  + ++DVVSWN MI+G++
Sbjct: 149 LGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV 208

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
             G  +K LE+FK+M +        TMV VLS CA    L FGR V ++  +   +  ++
Sbjct: 209 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N +LDMY+KCG ++ A R+F+ M E+  V+WT+M+ GYA    ++ A  +   M ++ 
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328

Query: 364 I--------------EP------------------DVYAITSILHACACDGLLEIGKDVH 391
           I              +P                  +   + S L ACA  G LE+G+ +H
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
            YIK++ ++ + +V++AL+ MY+KCG +  +  VFN +  +D+  W+ MIG         
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448

Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI-HGYILRHGISADRNVANAI 499
            A+D+F  M + N +P+GVT   +  AC+    ++    + H     +GI  +      I
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
           VD+  + G L  A    + +P     S W  ++    +H 
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 184/414 (44%), Gaps = 71/414 (17%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+  +++  A++ SL  G+ +H +  +S  V  D  + + L+  + +CGDL    +VF  
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSA-VGSDVFVANSLIHCYFSCGDLDSACKVFTT 191

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN---S 214
           I    V  WN +++ + + G+  ++L LFKKM+S  + A   T   VL   A + N    
Sbjct: 192 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251

Query: 215 RRV-----------------------------KDAHKLFDELSD---------------- 229
           R+V                             +DA +LFD + +                
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311

Query: 230 ---------------RDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTV 273
                          +D+V+WN +IS Y  NG   + L VF E+ L     ++  T+V+ 
Sbjct: 312 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 371

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           LS CA  GAL  GR +H++  K          + L+ MYSKCGDL+ +  VF  + +R V
Sbjct: 372 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
             W++MI G A  G  + A+ +F  M    ++P+    T++  AC+  GL++  + +   
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 491

Query: 394 IKEND---MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
           ++ N     +   Y    ++D+  + G +  A      MP+    S W  ++GA
Sbjct: 492 MESNYGIVPEEKHYA--CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 12/201 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +NA I  + + G   +A+ V +     +  K++  T  S L  CA + +LE G+ +HS I
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + GI ++  V  S L+ M+  CGDL++ R VFN ++   VF+W+ ++   +  G   E+
Sbjct: 392 KKHGIRMNFHVT-SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL-SDRDVVS----WNC 237
           + +F KMQ   +  +  TF+ V    +  G    V +A  LF ++ S+  +V     + C
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTG---LVDEAESLFHQMESNYGIVPEEKHYAC 507

Query: 238 MISGYIANGVAEKGLEVFKEM 258
           ++     +G  EK ++  + M
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAM 528


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 274/757 (36%), Positives = 424/757 (56%), Gaps = 53/757 (7%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           +A +   C  G L +A+ +L SS +   D   Y ++ +LC   ++++ G +     C   
Sbjct: 68  SAALRALCSHGQLAQALWLLESSPEPP-DEGAYVALFRLCEWRRAVDAGMRA----CARA 122

Query: 127 IVIDDGV---LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
                     LG+ ++ M V  G++    RVF K+    VF WN+++  Y K G  +E+L
Sbjct: 123 DAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEAL 182

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH---------------------- 221
            L+ +M   G+  D YTF CVL+    + + R  ++ H                      
Sbjct: 183 DLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMY 242

Query: 222 ----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                     K+FD ++  D +SWN MI+G+  N   E GLE+F  ML      +L T+ 
Sbjct: 243 AKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTIT 302

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +V         + F + +H FA+K  F+ +++F N+L+ MY+  G +  A ++F +M  +
Sbjct: 303 SVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK 362

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             +SWT+MI+GY + G  D A+ ++  M    + PD   I S L ACAC G L++G  +H
Sbjct: 363 DAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLH 422

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
           +  +       + V+NAL++MYAK   +  A  VF  M  KD+VSW++MI          
Sbjct: 423 ELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSF 482

Query: 443 -ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
            AL  F  ML + +P+ VT    L ACA+  AL  G+EIH Y+LR GI ++  V NA++D
Sbjct: 483 EALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLD 542

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           +YVKCG    A + F +   KD++SW IM++G+  HG G  A++ FN M + G  PDEV+
Sbjct: 543 LYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVT 602

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           F+++L ACS +G+V +GW  F+MM  + +I P L+HYACMVDLLSR G L+EAY  I  M
Sbjct: 603 FVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRM 662

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P+ PDA +WG+LL GCRIH  V+L E  A+ + ELEP++  Y+VLL ++Y +A KW +V 
Sbjct: 663 PIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVA 722

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           ++R+ +  +GL+++ GCSW+E+KG  + F+    SHP  K+I  +L  +   MK  G+ P
Sbjct: 723 RVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAP 782

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
                 +   E+ ++  LCGHSE+LA+AFG++N   G
Sbjct: 783 VES---LEDKEVSEDDILCGHSERLAVAFGLINTTPG 816



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 247/520 (47%), Gaps = 49/520 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +G + +VG LE+A+++ Y       + D  T+  +L+ C  +     G++VH+ +
Sbjct: 164 SWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHV 223

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G   +  VL + LV M+  CGD+   R+VF+ +       WN ++  + +    +  
Sbjct: 224 LRFGFGDEVDVLNA-LVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAG 282

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSR------------------------ 215
           L LF  M    +  +  T + V      L+ VG ++                        
Sbjct: 283 LELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQM 342

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R+ DA K+F  +  +D +SW  MISGY  NG  +K LEV+  M     + D  T+
Sbjct: 343 YTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTI 402

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + L+ CA  G L  G  +H  A    F + +   N LL+MY+K   +D AI VF+ M E
Sbjct: 403 ASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAE 462

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVSW+SMIAG+        A+  FR M+   ++P+     + L ACA  G L  GK++
Sbjct: 463 KDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEI 521

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H Y+    + S  YV NAL+D+Y KCG  + A + F+    KD+VSWN M+         
Sbjct: 522 HAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLG 581

Query: 443 --ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREI-HGYILRHGISADRNVANA 498
             AL LF  M++  E PD VT   +L AC+    + +G E+ H    +  I  +      
Sbjct: 582 DIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYAC 641

Query: 499 IVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           +VD+  + G L  A +L + +P K D   W  ++ G  +H
Sbjct: 642 MVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIH 681


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 268/783 (34%), Positives = 422/783 (53%), Gaps = 54/783 (6%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           I   TY    +    +  L    + H+ I   G   D  +L +KL       G +   R 
Sbjct: 18  ISKNTYLDFFKRSTSISHL---AQTHAQIILHGFRNDISLL-TKLTQRLSDLGAIYYARD 73

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYTFSCVLKCLAVVG 212
           +F  +    VF++N+LM  +S   +   SL +F  + +S  +  +S T++  +   +   
Sbjct: 74  IFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFR 133

Query: 213 NSR--------------------------------RVKDAHKLFDELSDRDVVSWNCMIS 240
           + R                                RV+DA K+FD + ++D + WN MIS
Sbjct: 134 DDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMIS 193

Query: 241 GYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFALKA-CF 298
           GY  N +  + ++VF++++N     +D  T++ +L   A    L  G  +H+ A K  C+
Sbjct: 194 GYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY 253

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
           S +       + +YSKCG +     +F +  +  +V++ +MI GY   G  + ++ LF+ 
Sbjct: 254 SHDYVLTG-FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           ++  G       + S++      G L +   +H Y  +++  S   VS AL  +Y+K   
Sbjct: 313 LMLSGARLRSSTLVSLV---PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNE 369

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPA 467
           +  A  +F++ P K + SWN MI           A+ LF  M ++ F P+ VT+ CIL A
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           CA L AL  G+ +H  +      +   V+ A++ MY KCG +  AR LFD++  K+ ++W
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
             MI+GYG+HG G +A+  F +M  +GI P  V+F+ VLYACSH+GLV EG   FN M +
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
               EP ++HYACMVD+L R G+L  A +FIE M + P +++W +LL  CRIH +  LA 
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLAR 609

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
            V+E +FEL+PDN GY+VLL+N+++    + +   +R+   +R L K PG + IEI    
Sbjct: 610 TVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETP 669

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
           ++F +G  SHP  K+I   L++L  +M+  GY P+T  AL + +E E+E+ +  HSE+LA
Sbjct: 670 HVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLA 729

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
           +AFG++    G  IR+ KNLRVC DCH + K +SK   R IV+RD+NRFHHFKDG CSC 
Sbjct: 730 IAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCG 789

Query: 828 GFW 830
            +W
Sbjct: 790 DYW 792



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/539 (28%), Positives = 259/539 (48%), Gaps = 63/539 (11%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG-----VLGSKLVF 140
           L  S   K ++ TY   +   +  +    G+ +H      G  + DG     +LGS +V 
Sbjct: 109 LRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIH------GQAVVDGCDSELLLGSNIVK 162

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK------------- 187
           M+     +++ R+VF+++      +WN ++  Y K   + ES+ +F+             
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222

Query: 188 -------------------KMQSLGIAADSYTFSCVLK-CLAVVGNSRRVKDAHKLFDEL 227
                              ++ SL      Y+   VL   +++     ++K    LF E 
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF 282

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
              D+V++N MI GY +NG  E  L +FKE++  G  +  +T+V+++      G LM   
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV---PVSGHLMLIY 339

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
           A+H + LK+ F    S +  L  +YSK  +++ A ++F++  E+S+ SW +MI+GY + G
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
           + + AI LFR M +    P+   IT IL ACA  G L +GK VHD ++  D +SS+YVS 
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEP 456
           AL+ MYAKCGS+A+A  +F+ M  K+ V+WNTMI           AL++F  ML +   P
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP 519

Query: 457 DGVTMACILPACASLAALERGREI-HGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
             VT  C+L AC+    ++ G EI +  I R+G          +VD+  + G L  A   
Sbjct: 520 TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQF 579

Query: 516 FDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
            + +  +   S W  ++    +H     A      + +  ++PD V +  VL +  HS 
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGY-HVLLSNIHSA 635



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/319 (20%), Positives = 137/319 (42%), Gaps = 52/319 (16%)

Query: 66  YNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           YNA I  +   G  E ++    E++ S   +++ + T  S++ +   L  +     +H  
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSG--ARLRSSTLVSLVPVSGHLMLI---YAIHGY 344

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             +S   +    + + L  ++    +++  R++F++     +  WN ++  Y++ G  ++
Sbjct: 345 CLKSNF-LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVG----------------------------- 212
           ++ LF++MQ    + +  T +C+L   A +G                             
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463

Query: 213 ---NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                  + +A +LFD ++ ++ V+WN MISGY  +G  ++ L +F EMLN G      T
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523

Query: 270 MVTVLSGCANCGAL-----MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            + VL  C++ G +     +F   +H +     F   +     ++D+  + G L  A++ 
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYG----FEPSVKHYACMVDILGRAGHLQRALQF 579

Query: 325 FEKMG-ERSVVSWTSMIAG 342
            E M  E     W +++  
Sbjct: 580 IEAMSIEPGSSVWETLLGA 598



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 19/205 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + + G  E A+ +    +KS+      T   IL  CA L +L  GK VH ++
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446

Query: 123 ----CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
                ES I +   ++G     M+  CG + E RR+F+ +       WN ++  Y   G 
Sbjct: 447 RSTDFESSIYVSTALIG-----MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVV 233
            +E+L +F +M + GI     TF CVL   +  G    VK+  ++F+ +  R      V 
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAG---LVKEGDEIFNSMIHRYGFEPSVK 558

Query: 234 SWNCMISGYIANGVAEKGLEVFKEM 258
            + CM+      G  ++ L+  + M
Sbjct: 559 HYACMVDILGRAGHLQRALQFIEAM 583


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/775 (35%), Positives = 418/775 (53%), Gaps = 44/775 (5%)

Query: 99   YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
            + S+L  C  ++  + G+++H ++ + G  ++  V  + LV ++   G+     +VFN +
Sbjct: 274  FSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNA-LVTLYSRLGNFIPAEQVFNAM 332

Query: 159  DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------ 212
                   +N L+   S+ G   ++L LFKKM    +  D  T + +L   + VG      
Sbjct: 333  LQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGK 392

Query: 213  --------------------------NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                                          +K AH+ F      +VV WN M+  Y    
Sbjct: 393  QFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLD 452

Query: 247  VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
               +  ++F +M   G   +  T  ++L  C++  A+  G  +H   LK  F   +  ++
Sbjct: 453  NLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSS 512

Query: 307  TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
             L+DMY+K G LD A+++F ++ E+ VVSWT+MIAGYA+   F  A+ LF+ M  +GI  
Sbjct: 513  VLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHS 572

Query: 367  DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
            D     S + ACA    L  G+ +H     +     L V NAL+ +YA+CG + DA   F
Sbjct: 573  DNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAF 632

Query: 427  NQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALE 475
            +++  KD +SWN++I           AL LF  M +   E +  T    + A A++A ++
Sbjct: 633  DKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVK 692

Query: 476  RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
             G++IH  I++ G  ++  V+N ++ +Y KCG +  A   F  +P K+ ISW  M+ GY 
Sbjct: 693  LGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYS 752

Query: 536  MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
             HG G  A++ F DM+Q G+ P+ V+F+ VL ACSH GLVDEG ++F  MR    + PK 
Sbjct: 753  QHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKP 812

Query: 596  EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
            EHYAC+VDLL R+G LS A RF+E MP+ PDA +  +LL  C +H  + + E  A H+ E
Sbjct: 813  EHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLE 872

Query: 656  LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
            LEP ++  YVLL+N+YA   KW    + R+ +  RG+KK PG SWIE+   V+ F AG  
Sbjct: 873  LEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQ 932

Query: 716  SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
             HP+  KI   L+ L       GY P+T   L +A+  +K      HSEKLA+AFG+L+L
Sbjct: 933  KHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSL 992

Query: 776  PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             +   I V KNLRVCGDCH   K++SK + R IV+RDS RFHHFK G CSC+ +W
Sbjct: 993  SSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/596 (29%), Positives = 291/596 (48%), Gaps = 47/596 (7%)

Query: 89  SEKSKIDTKTYCSILQLCADLK-SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
            EK K D +TY  +L+ C          +K+H+     G   +   + + L+ ++   G 
Sbjct: 162 QEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYE-NSLFVCNPLIDLYFKNGF 220

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK- 206
           L   ++VF+ +       W  ++   S++G  +E++ LF +M + G+    Y FS VL  
Sbjct: 221 LNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSA 280

Query: 207 ----------------------------CLAVVGNSRRVKD---AHKLFDELSDRDVVSW 235
                                       C A+V    R+ +   A ++F+ +  RD VS+
Sbjct: 281 CTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSY 340

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N +ISG    G ++K LE+FK+M       D  T+ ++LS C++ GAL+ G+  H++A+K
Sbjct: 341 NSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIK 400

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
           A  S +I     LLD+Y KC D+  A   F      +VV W  M+  Y      + + ++
Sbjct: 401 AGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKI 460

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           F  M  EGIEP+ +   SIL  C+    +++G+ +H  + +   Q ++YVS+ L+DMYAK
Sbjct: 461 FTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAK 520

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACI 464
            G +  A  +F ++  KD+VSW  MI           AL+LF  M  Q    D +  A  
Sbjct: 521 LGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASA 580

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           + ACA + AL +G++IH      G S D +V NA+V +Y +CG +  A   FD I +KD 
Sbjct: 581 ISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDN 640

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           ISW  +I+G+   G   +A++ F+ M +AG E +  +F   + A ++   V  G +   M
Sbjct: 641 ISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAM 700

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           +  +   + + E    ++ L ++ GN+ +A R    MP   + + W ++L G   H
Sbjct: 701 I-IKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEIS-WNAMLTGYSQH 754



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 257/519 (49%), Gaps = 23/519 (4%)

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
           N + ++W  L+     +G F +   L  K+  +G  A+      ++      G+   +  
Sbjct: 67  NSQTYLW--LLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGD---LDG 121

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +FDE+  R +  WN ++  ++A  +A + L +F+ ML      D  T   VL GC  
Sbjct: 122 AVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGG 181

Query: 280 CGALMFG--RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
            G + F     +HA  +   +   +   N L+D+Y K G L+ A +VF+ + +R  VSW 
Sbjct: 182 -GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWV 240

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           +M++G ++ G  + A+ LF  M   G+ P  Y  +S+L AC      ++G+ +H  + + 
Sbjct: 241 AMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQ 300

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
                 YV NAL+ +Y++ G+   AE VFN M  +D VS+N++I           AL+LF
Sbjct: 301 GFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELF 360

Query: 448 VAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M L   +PD VT+A +L AC+S+ AL  G++ H Y ++ G+S+D  +  A++D+YVKC
Sbjct: 361 KKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKC 420

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             +  A   F     ++++ W +M+  YG+     ++   F  M+  GIEP++ ++ S+L
Sbjct: 421 SDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSIL 480

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
             CS    VD G +    +  +   +  +   + ++D+ ++ G L  A +    +    D
Sbjct: 481 RTCSSLRAVDLGEQIHTQV-LKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK-EKD 538

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGY 663
              W +++ G   H +   A  + + + +  +  DN G+
Sbjct: 539 VVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGF 577



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 246/510 (48%), Gaps = 59/510 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +YN+ I    + G  +KA+E+      +  K D  T  S+L  C+ + +L  GK+ HS  
Sbjct: 339 SYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYA 398

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G+   D +L   L+ ++V C D+K     F   +   V +WN+++  Y    N  ES
Sbjct: 399 IKAGMS-SDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNES 457

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC--------------------------------LAV 210
             +F +MQ  GI  + +T+  +L+                                 + +
Sbjct: 458 FKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDM 517

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                ++  A K+F  L ++DVVSW  MI+GY  +    + L +FKEM + G + D    
Sbjct: 518 YAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGF 577

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + +S CA   AL  G+ +HA A  + +S ++S  N L+ +Y++CG +  A   F+K+  
Sbjct: 578 ASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFS 637

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +  +SW S+I+G+A+ G  + A+ LF  M + G E + +     + A A    +++GK +
Sbjct: 638 KDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQI 697

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I +    S   VSN L+ +YAKCG++ DAE  F +MP K+ +SWN M+         
Sbjct: 698 HAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHG 757

Query: 443 --ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG-------REIHGYILRHGISAD 492
             AL LF  M Q    P+ VT   +L AC+ +  ++ G       RE+HG + +    A 
Sbjct: 758 FKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYA- 816

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
                 +VD+  + G+L  AR   + +P +
Sbjct: 817 -----CVVDLLGRSGLLSRARRFVEEMPIQ 841



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 150/599 (25%), Positives = 257/599 (42%), Gaps = 89/599 (14%)

Query: 236 NCMISGYIANGVAE-KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           N  +S   +N   E  G+     M   G   +  T + +L GC + G    G  +H   L
Sbjct: 36  NTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKIL 95

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           K  F  E+     L+D+Y   GDLDGA+ VF++M  R +  W  ++  +    +    + 
Sbjct: 96  KMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLG 155

Query: 355 LFRGMVREGIEPDVYAITSILHAC-ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
           LFR M++E ++PD      +L  C   D      + +H     +  ++SL+V N L+D+Y
Sbjct: 156 LFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLY 215

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGALD----------LFVAM-LQNFEPDGVTMA 462
            K G +  A+ VF+ +  +D VSW  M+  L           LF  M      P     +
Sbjct: 216 FKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFS 275

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            +L AC  +   + G ++HG +L+ G S +  V NA+V +Y + G  + A  +F+ +  +
Sbjct: 276 SVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQR 335

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           D +S+  +I+G    G+   A+  F  M    ++PD V+  S+L ACS  G +  G +F 
Sbjct: 336 DEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFH 395

Query: 583 NM---------------------------MRYECNIEPKLEHYACMVDLLSRTG---NLS 612
           +                              +E  +  + E+      +L   G   NL+
Sbjct: 396 SYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLN 455

Query: 613 EAYRF---IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY----YV 665
           E+++    ++M  + P+   + S+L  C     V L E++   V +     TG+    YV
Sbjct: 456 ESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLK-----TGFQFNVYV 510

Query: 666 --LLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
             +L ++YA+  K +       KI RR LK+    SW  +       +AG + H    + 
Sbjct: 511 SSVLIDMYAKLGKLDHAL----KIFRR-LKEKDVVSWTAM-------IAGYAQHEKFAEA 558

Query: 724 ESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIR 782
            +L K    EM+ +G         I++D +       G +  ++   GI  L  GQ I 
Sbjct: 559 LNLFK----EMQDQG---------IHSDNI-------GFASAISACAGIQALNQGQQIH 597



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 168/397 (42%), Gaps = 101/397 (25%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           A+  +F E  NL K M+     +    D   + S +  CA +++L  G+++H+  C SG 
Sbjct: 550 AQHEKFAEALNLFKEMQ----DQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGY 605

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
             DD  +G+ LV ++  CG +++    F+KI +     WN L+  ++++G+ +E+L LF 
Sbjct: 606 S-DDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFS 664

Query: 188 KMQSLGIAADSYTF-----------------------------------SCVLKCLAVVG 212
           +M   G   +S+TF                                   + ++   A  G
Sbjct: 665 QMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCG 724

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           N   + DA + F E+ +++ +SWN M++GY  +G   K L +F++M  LG   +  T V 
Sbjct: 725 N---IDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVG 781

Query: 273 VLSGCANCGALMFG-------RAVHAFALK----ACFSKEISFNNTLLDMYSKCGDLDGA 321
           VLS C++ G +  G       R VH    K    AC          ++D+  + G L  A
Sbjct: 782 VLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYAC----------VVDLLGRSGLLSRA 831

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            R  E+M                                   I+PD     ++L AC   
Sbjct: 832 RRFVEEM----------------------------------PIQPDAMVCRTLLSACIVH 857

Query: 382 GLLEIGKDVHDYIKENDMQ-SSLYVSNALMDMYAKCG 417
             ++IG+    ++ E + + S+ YV   L +MYA  G
Sbjct: 858 KNIDIGEFAASHLLELEPKDSATYV--LLSNMYAVTG 892


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/631 (41%), Positives = 391/631 (61%), Gaps = 32/631 (5%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG----LEVFKEMLNLGFNVDLATMVT 272
           + DA  +F  +  RD+V+WN M++GY  +G+        L +  +M  L  N   +T+V 
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNA--STLVA 118

Query: 273 VLSGCANCGALMFGRAVHAFALKACF----------SKEISFNNTLLDMYSKCGDLDGAI 322
           +L   A  GAL  G +VHA+ ++AC           +  +     LLDMY+KCG L  A 
Sbjct: 119 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 178

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI---EPDVYAITSILHACA 379
           RVF+ M  R+ V+W+++I G+        A  LF+ M+ +G+    P   +I S L ACA
Sbjct: 179 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACA 236

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               L +G+ +H  + ++ + + L   N+L+ MYAK G +  A ++F++M VKD VS++ 
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296

Query: 440 MIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           ++           A  +F  M   N EPD  TM  ++PAC+ LAAL+ GR  HG ++  G
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
           ++++ ++ NA++DMY KCG + L+R +F+M+P++D++SW  MIAGYG+HG G +A A F 
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
           +M   G  PD V+FI +L ACSHSGLV EG  +F++M +   + P++EHY CMVDLLSR 
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 476

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           G L EAY FI+ MP+  D  +W +LL  CR++  + L +KV+  + EL P+ TG +VLL+
Sbjct: 477 GFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLS 536

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           N+Y+ A +++E  ++R     +G KK+PGCSWIEI G ++ FV G  SHP + +I   L 
Sbjct: 537 NIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELD 596

Query: 729 RLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLR 788
            + + +K+ GY P T + L + +E EKE AL  HSEKLA+A+GIL+L   +TI VTKNLR
Sbjct: 597 NILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLR 656

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
           VCGDCH + K +S   RR I++RD+NRFHHF
Sbjct: 657 VCGDCHTVIKHISLVKRRAIIVRDANRFHHF 687



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 210/450 (46%), Gaps = 47/450 (10%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T    L  C+       GRA+H  A+ A    ++  +  LLDMY KC  L  A  +F  M
Sbjct: 12  TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 71

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIR--LFRGMVREGIEPDVYAITSILHACACDGLLEI 386
             R +V+W +M+AGYA  G++  A+   L   M    + P+   + ++L   A  G L  
Sbjct: 72  PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 131

Query: 387 GKDVHDYI----------KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
           G  VH Y            ++ +   + +  AL+DMYAKCGS+  A  VF+ MP ++ V+
Sbjct: 132 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 191

Query: 437 WNTMIG----------ALDLFVAMLQN----FEPDGVTMACILPACASLAALERGREIHG 482
           W+ +IG          A  LF AML        P   ++A  L ACASL  L  G ++H 
Sbjct: 192 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLHA 249

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
            + + G+ AD    N+++ MY K G++  A +LFD +  KD +S++ +++GY  +G   +
Sbjct: 250 LLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEE 309

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSH-----SGLVDEGWRFFNMMRYECNIEPKLEH 597
           A   F  M+   +EPD  + +S++ ACSH      G    G      +  E +I   L  
Sbjct: 310 AFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNAL-- 367

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL- 656
               +D+ ++ G +  + +   MMP + D   W +++ G  IH   K A  +   +  L 
Sbjct: 368 ----IDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422

Query: 657 -EPDNTGYYVLL-----ANVYAEAEKWEEV 680
             PD   +  LL     + +  E + W  V
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHV 452



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 210/476 (44%), Gaps = 66/476 (13%)

Query: 46  CTINPISASISKTLVCK-TKNYNAEIGRFCEVGNLEKAMEVLYSSE----KSKIDTKTYC 100
           C   P +A I  T+  +    +NA +  +   G    A+  L S +    + + +  T  
Sbjct: 58  CACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLV 117

Query: 101 SILQLCADLKSLEDGKKVHSIICESGI--------VIDDGVL-GSKLVFMFVTCGDLKEG 151
           ++L L A   +L  G  VH+    + +         + DGVL G+ L+ M+  CG L   
Sbjct: 118 ALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 177

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT-FSCVLKCLAV 210
           RRVF+ +       W+ L+  +       ++  LFK M + G+   S T  +  L+  A 
Sbjct: 178 RRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACAS 237

Query: 211 VGNSRRVKDAH--------------------------------KLFDELSDRDVVSWNCM 238
           + + R  +  H                                 LFDE++ +D VS++ +
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 297

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           +SGY+ NG AE+   VFK+M       D ATMV+++  C++  AL  GR  H   +    
Sbjct: 298 VSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL 357

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
           + E S  N L+DMY+KCG +D + +VF  M  R +VSW +MIAGY   G+   A  LF  
Sbjct: 358 ASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLE 417

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDV-----HDYIKENDMQSSLYVSNALMDMY 413
           M   G  PD      +L AC+  GL+  GK       H Y     M+  +     ++D+ 
Sbjct: 418 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI----CMVDLL 473

Query: 414 AKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLF---------VAMLQNFEPDGV 459
           ++ G + +A      MP++ D+  W  ++GA  ++           M+Q   P+G 
Sbjct: 474 SRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGT 529



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 188/448 (41%), Gaps = 88/448 (19%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M+R  + P+ Y     L AC+       G+ +H +     +Q+ L+VS AL+DMY KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM---LQNFEPDGVTMACIL 465
           + DA  +F  MP +D+V+WN M+           A+   ++M   +    P+  T+  +L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 466 PACASLAALERGREIHGYILRHGISADRN----------VANAIVDMYVKCGVLVLARSL 515
           P  A   AL +G  +H Y +R  +  +RN          +  A++DMY KCG L+ AR +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 516 FDMIPAKDLISWTIMIAGYGM-----HGF---------------------GCDAIATFND 549
           FD +PA++ ++W+ +I G+ +       F                        A A+ + 
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 550 MR----------QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
           +R          ++G+  D  +  S+L   + +GL+D+    F+ M  +  +      Y+
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS-----YS 295

Query: 600 CMVDLLSRTGNLSEAYRFIEMMP---VAPDATIWGSLLCGCRIHHEVKLAEKVAEH---V 653
            +V    + G   EA+   + M    V PDA    SL+  C   H   L      H   +
Sbjct: 296 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACS--HLAALQHGRCSHGSVI 353

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
                  T     L ++YA+  + +  +++   +  R +      SW       N  +AG
Sbjct: 354 IRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDI-----VSW-------NTMIAG 401

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFP 741
              H   K+  +L     LEM   G+ P
Sbjct: 402 YGIHGLGKEATALF----LEMNNLGFPP 425



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 15/274 (5%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
           T +Y+A +  + + G  E+A  V    +   +  D  T  S++  C+ L +L+ G+  H 
Sbjct: 291 TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 350

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            +   G+  +  +  + L+ M+  CG +   R+VFN + +  +  WN ++  Y   G  K
Sbjct: 351 SVIIRGLASETSICNA-LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGK 409

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE---LSDRDVVSWNC 237
           E+  LF +M +LG   D  TF C+L   +  G     K    +      L+ R +  + C
Sbjct: 410 EATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPR-MEHYIC 468

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+      G  ++  E  + M       D+   V +L  C     +  G+ V     +  
Sbjct: 469 MVDLLSRGGFLDEAYEFIQSM---PLRADVRVWVALLGACRVYKNIDLGKKVSRMIQE-- 523

Query: 298 FSKEISFNNTLL-DMYSKCGDLDGA--IRVFEKM 328
              E + N  LL ++YS  G  D A  +R+ +K+
Sbjct: 524 LGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKV 557


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/778 (35%), Positives = 418/778 (53%), Gaps = 48/778 (6%)

Query: 100 CSILQLCADLKSLED---GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           C+   L   LK + D   G +VH++   +G    D  + + LV M+   G + + RRVFN
Sbjct: 101 CNEFALPVVLKCVPDARLGAQVHAMAMATGFG-SDVFVANALVAMYGGFGFMDDARRVFN 159

Query: 157 KIDNGKVFI-WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR 215
           + D+ +  + WN LM  Y K     +++ +F +M   GI    + FSCV+       N  
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE 219

Query: 216 --------------------------------RVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                           RV  A  +F+++ D DVVSWN +ISG +
Sbjct: 220 AGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            NG   + +E+  +M   G   ++ T+ ++L  C+  GA   GR +H F +KA    +  
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY 339

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               L+DMY+K   LD A +VF+ M  R ++   ++I+G +  G  D A+ LF  + +EG
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG 399

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           +  +   + ++L + A        + VH    +       +V N L+D Y KC  ++DA 
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDAN 459

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVTMACILPACASLA 472
            VF +    DI++  +MI          GA+ LF+ ML +  EPD   ++ +L ACASL+
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           A E+G+++H ++++    +D    NA+V  Y KCG +  A   F  +P + ++SW+ MI 
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIG 579

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           G   HG G  A+  F  M   GI P+ ++  SVL AC+H+GLVDE  R+FN M+    I+
Sbjct: 580 GLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGID 639

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
              EHY+CM+DLL R G L +A   +  MP   +A+IWG+LL   R+H + +L +  AE 
Sbjct: 640 RTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEK 699

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           +F LEP+ +G +VLLAN YA A  W EV K+R+ +    +KK P  SWIE+K KV+ F+ 
Sbjct: 700 LFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIV 759

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  SHP  K+I + L  L   M + G+ P     L + D  EKE+ L  HSE+LA+AF +
Sbjct: 760 GDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFAL 819

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           L+ P G  IRV KNLR+C DCH   KF+SK   REI++RD NRFHHF+DG CSC  +W
Sbjct: 820 LSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 192/381 (50%), Gaps = 19/381 (4%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+   L+  A   AL+ G  +HA  LK+      SF N L+  YSKC     A RVF+++
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKS--GSLASFRNHLISFYSKCRRPCCARRVFDEI 63

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            +   VSW+S++  Y+  G+   AI+ F GM  EG+  + +A+  +L  C  D  L  G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL-KCVPDARL--GA 120

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIG----- 442
            VH         S ++V+NAL+ MY   G M DA  VFN+    ++ VSWN ++      
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 443 -----ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                A+ +F  M+    +P     +C++ AC     +E GR++H  ++R G   D   A
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           NA+VDMY+K G + +A  +F+ +P  D++SW  +I+G  ++G    AI     M+ +G+ 
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           P+  +  S+L ACS +G  D G +    M  + N +        +VD+ ++   L +A +
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFM-IKANADSDDYIGVGLVDMYAKNHFLDDARK 359

Query: 617 FIEMMPVAPDATIWGSLLCGC 637
             + M    D  +  +L+ GC
Sbjct: 360 VFDWM-FHRDLILCNALISGC 379



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 200/417 (47%), Gaps = 41/417 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I      G+  +A+E+L   + S +  +  T  SIL+ C+   + + G+++H  +
Sbjct: 270 SWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++    DD  +G  LV M+     L + R+VF+ + +  + + N L+   S  G   E+
Sbjct: 330 IKANADSDD-YIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEA 388

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSRRV---------------------- 217
           L LF +++  G+  +  T + VLK    L     +R+V                      
Sbjct: 389 LSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDS 448

Query: 218 -------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                   DA+++F+E S  D+++   MI+        E  +++F EML  G   D   +
Sbjct: 449 YWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++L+ CA+  A   G+ VHA  +K  F  +    N L+  Y+KCG ++ A   F  + E
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R VVSW++MI G A+ G    A+ LF  MV EGI P+   +TS+L AC   GL++  K  
Sbjct: 569 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628

Query: 391 HDYIKEN---DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +KE    D     Y  + ++D+  + G + DA  + N MP +   S W  ++GA
Sbjct: 629 FNSMKEMFGIDRTEEHY--SCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/809 (34%), Positives = 431/809 (53%), Gaps = 48/809 (5%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSIICES 125
           A I    + G  ++A+ +     KS +    Y   S+L  C  ++  + G+++H  I + 
Sbjct: 183 AMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKW 242

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
           G+  +  V  + LV ++   G+L    ++F+K+       +N L+   ++ G    +L L
Sbjct: 243 GLSSETFVCNA-LVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQL 301

Query: 186 FKKMQSLGIAADSYTFSCVLKCLAVVGNSRR----------------------------- 216
           F+KMQ   +  D  T + +L   A VG   +                             
Sbjct: 302 FEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVK 361

Query: 217 ---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
              ++ AH+ F      +VV WN M+  Y   G   +   +F +M   G   +  T  ++
Sbjct: 362 CFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSI 421

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L  C + GAL  G  +H   +K+ F   +   + L+DMY+K G+LD A  + +++ E  V
Sbjct: 422 LRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDV 481

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSWT+MIAGY +  +F  A++LF+ M  +GI  D    +S + ACA    L  G+ +H  
Sbjct: 482 VSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQ 541

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
              +     L + NAL+ +YA+CG   DA   F ++  KD +SWN +I           A
Sbjct: 542 SYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEA 601

Query: 444 LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           L +F  M Q   E +  T    + A A+ A +++G++IH  +++ G  ++   +N ++ +
Sbjct: 602 LQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITL 661

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG +  A+  F  +P K+++SW  MI GY  HG+G +A++ F +M+Q G+ P+ V+F
Sbjct: 662 YSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTF 721

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           + VL ACSH GLV+EG  +F  M  E  + PK EHY C+VDLL R   L  A  FIE MP
Sbjct: 722 VGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMP 781

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + PDA IW +LL  C +H  +++ E  A H+ ELEP+++  YVLL+N+YA + KW+   +
Sbjct: 782 IEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDR 841

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
            R+ +  RG+KK PG SWIE+K  ++ F  G   HP A++I   +  L       GY  +
Sbjct: 842 TRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYV-Q 900

Query: 743 TRYALINADEME-KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            RY L+N  E E K+     HSEKLA+AFG+L+L     IRV KNLRVC DCH   KF+S
Sbjct: 901 DRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVS 960

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K + R IV+RD+ RFHHF+ G CSC+ +W
Sbjct: 961 KISNRAIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 167/588 (28%), Positives = 275/588 (46%), Gaps = 47/588 (7%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + + +TY  + + C +  SL D KK+H+ I +SG   +D VLGS+L+ +++  G++    
Sbjct: 7   RANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGED-VLGSRLIDIYLAHGEVDNAI 65

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----- 207
           ++F+ I +  V  WN ++          + L LF  M +  +  D  TF+ VL+      
Sbjct: 66  KLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGK 125

Query: 208 ----------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMI 239
                                       + +   +  V  A  +F+ L  +D VSW  MI
Sbjct: 126 APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMI 185

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           SG   NG  ++ + +F +M             +VLS C        G  +H F +K   S
Sbjct: 186 SGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLS 245

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            E    N L+ +YS+ G+L  A ++F KM  R  +S+ S+I+G A+ G  D A++LF  M
Sbjct: 246 SETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM 305

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             + ++PD   + S+L ACA  G    GK +H Y+ +  M S L +  +L+D+Y KC  +
Sbjct: 306 QLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDI 365

Query: 420 ADAESVFNQMPVKDIVSWNTMIGALD----------LFVAM-LQNFEPDGVTMACILPAC 468
             A   F     +++V WN M+ A            +F+ M ++   P+  T   IL  C
Sbjct: 366 ETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTC 425

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
            SL AL+ G +IH  +++ G   +  V + ++DMY K G L  AR +   +  +D++SWT
Sbjct: 426 TSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWT 485

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MIAGY  H    +A+  F +M   GI  D + F S + AC+    +++G +  +   Y 
Sbjct: 486 AMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQ-IHAQSYI 544

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
                 L     +V L +R G   +AY   E +  A D   W +L+ G
Sbjct: 545 SGYSEDLSIGNALVSLYARCGRAQDAYLAFEKID-AKDNISWNALISG 591



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 148/556 (26%), Positives = 271/556 (48%), Gaps = 53/556 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +YN+ I    + G  ++A+++    +    K D  T  S+L  CA + +   GK++HS +
Sbjct: 281 SYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYV 340

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+  D  + GS L+ ++V C D++     F   +   V +WN+++  Y + GN  ES
Sbjct: 341 IKMGMSSDLIIEGS-LLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSES 399

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG--------NSRRVKD--------------- 219
            ++F +MQ  G+  + YT+  +L+    +G        +++ +K                
Sbjct: 400 YWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDM 459

Query: 220 ---------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                    A  +   L + DVVSW  MI+GY  + +  + L++F+EM N G   D    
Sbjct: 460 YAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGF 519

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + +S CA   AL  G+ +HA +  + +S+++S  N L+ +Y++CG    A   FEK+  
Sbjct: 520 SSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDA 579

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +  +SW ++I+G+A+ G  + A+++F  M + G+E +++   S + A A    ++ GK +
Sbjct: 580 KDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQI 639

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  + +    S    SN L+ +Y+KCGS+ DA+  F +MP K++VSWN MI         
Sbjct: 640 HAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYG 699

Query: 443 --ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANA 498
             A+ LF  M Q    P+ VT   +L AC+ +  +  G      + + HG+         
Sbjct: 700 SEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVC 759

Query: 499 IVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           +VD+  +  +L  AR   + +P + D + W  +++   +H      I  F       +EP
Sbjct: 760 VVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVH--KNIEIGEFAARHLLELEP 817

Query: 558 DEVS---FISVLYACS 570
           ++ +    +S +YA S
Sbjct: 818 EDSATYVLLSNMYAVS 833



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 245/467 (52%), Gaps = 26/467 (5%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
            V +A KLFD++   +V  WN +ISG +A  +A + L +F  M+      D +T  +VL 
Sbjct: 60  EVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLR 119

Query: 276 GCANCGA-LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            C+   A       +HA  +   F       N L+D+YSK G +D A  VFE++  +  V
Sbjct: 120 ACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSV 179

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW +MI+G ++ G  D AI LF  M +  + P  Y  +S+L AC    L ++G+ +H +I
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
            +  + S  +V NAL+ +Y++ G++  AE +F++M  +D +S+N++I           AL
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRAL 299

Query: 445 DLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            LF  M L   +PD VT+A +L ACAS+ A  +G+++H Y+++ G+S+D  +  +++D+Y
Sbjct: 300 QLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLY 359

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
           VKC  +  A   F     ++++ W +M+  YG  G   ++   F  M+  G+ P++ ++ 
Sbjct: 360 VKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYP 419

Query: 564 SVLYACSHSGLVDEGWRFFNMM---RYECNIEPKLEHYAC--MVDLLSRTGNLSEAYRFI 618
           S+L  C+  G +D G +    +    ++ N+      Y C  ++D+ ++ G L  A   +
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNV------YVCSVLIDMYAKHGELDTARGIL 473

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGY 663
           + +    D   W +++ G   H     A K+ + +    +  DN G+
Sbjct: 474 QRLR-EEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGF 519



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 210/424 (49%), Gaps = 40/424 (9%)

Query: 59  LVCKTKN---YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLE 113
           L  +T+N   +N  +  + ++GNL ++  +    +   +  +  TY SIL+ C  L +L+
Sbjct: 373 LTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALD 432

Query: 114 DGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
            G+++H+ + +SG   +  V  S L+ M+   G+L   R +  ++    V  W  ++  Y
Sbjct: 433 LGEQIHTQVIKSGFQFNVYVC-SVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGY 491

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------ 209
           ++   F E+L LF++M++ GI +D+  FS  +   A                        
Sbjct: 492 TQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDL 551

Query: 210 VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
            +GN+         R +DA+  F+++  +D +SWN +ISG+  +G  E+ L+VF +M   
Sbjct: 552 SIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQA 611

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G   +L T  + +S  AN   +  G+ +HA  +K  +  E   +N L+ +YSKCG ++ A
Sbjct: 612 GVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDA 671

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            R F +M E++VVSW +MI GY++ G    A+ LF  M + G+ P+      +L AC+  
Sbjct: 672 KREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHV 731

Query: 382 GLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNT 439
           GL+  G      + KE+ +         ++D+  +   +  A     +MP++ D + W T
Sbjct: 732 GLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRT 791

Query: 440 MIGA 443
           ++ A
Sbjct: 792 LLSA 795



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 144/576 (25%), Positives = 260/576 (45%), Gaps = 78/576 (13%)

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G   ++ T + +  GC N G+L+  + +HA   K+ F  E    + L+D+Y   G++D A
Sbjct: 5   GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA-C 380
           I++F+ +   +V  W  +I+G   + +    + LF  M+ E + PD     S+L AC+  
Sbjct: 65  IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGG 124

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
               ++ + +H  I  +   SS  V N L+D+Y+K G +  A+ VF ++ +KD VSW  M
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAM 184

Query: 441 IGALD----------LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
           I  L           LF  M ++   P     + +L AC  +   + G ++HG+I++ G+
Sbjct: 185 ISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
           S++  V NA+V +Y + G L+ A  +F  +  +D IS+  +I+G    GF   A+  F  
Sbjct: 245 SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEK 304

Query: 550 MRQAGIEPDEVSFISVLYACSHSG--------------------LVDEGWRFFNMMRYEC 589
           M+   ++PD V+  S+L AC+  G                    L+ EG    ++     
Sbjct: 305 MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEG-SLLDLYVKCF 363

Query: 590 NIEPKLEHYAC-----------MVDLLSRTGNLSEAYRFIEMMPVA---PDATIWGSLLC 635
           +IE   E++             M+    + GNLSE+Y     M +    P+   + S+L 
Sbjct: 364 DIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILR 423

Query: 636 GCRIHHEVKLAEKVAEHVFELEPDNTGY----YV--LLANVYAEAEKWEEVKKLREKISR 689
            C     + L E++   V +     +G+    YV  +L ++YA   K  E+   R  + R
Sbjct: 424 TCTSLGALDLGEQIHTQVIK-----SGFQFNVYVCSVLIDMYA---KHGELDTARGILQR 475

Query: 690 RGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE---GYFPKTR-- 744
             L++    SW  +       +AG + H    +   L + +  +  R    G+       
Sbjct: 476 --LREEDVVSWTAM-------IAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISAC 526

Query: 745 ---YALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
               AL    ++  +  + G+SE L++   +++L A
Sbjct: 527 AGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYA 562



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 131/292 (44%), Gaps = 18/292 (6%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M   GI  +V     +   C   G L   K +H  I ++       + + L+D+Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 419 MADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNFEPDGVTMACILPA 467
           + +A  +F+ +P  ++  WN +I            L LF  M+ +N  PD  T A +L A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 468 CA-SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
           C+   A  +   +IH  I+ HG  +   V N ++D+Y K G + LA+ +F+ +  KD +S
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           W  MI+G   +G   +AI  F  M ++ + P    F SVL AC+   L   G +    + 
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI- 239

Query: 587 YECNIEPKLEHYAC--MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
                    E + C  +V L SR GNL  A +    M    D   + SL+ G
Sbjct: 240 --VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH-RRDRISYNSLISG 288


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 268/785 (34%), Positives = 439/785 (55%), Gaps = 49/785 (6%)

Query: 92  SKIDTKTYCSILQLCADLKSLED---GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           S +D+ +Y  +LQ    +++  D   GK +H  I + G  +D       L F +V    L
Sbjct: 30  SALDSHSYAHMLQQI--IRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNF-YVQSNSL 86

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           ++  ++F+++       +  L   YS+   F ++L+   ++   G   + + F+ +LK L
Sbjct: 87  QDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLL 146

Query: 209 ------------------------AVVGNSR--------RVKDAHKLFDELSDRDVVSWN 236
                                   A VG +          V  A  +FD++  +D+VSW 
Sbjct: 147 VSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWT 206

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            M++ Y  N   E+ L++F +M  +G+  +  T+   L  C    A   G++VH  ALK 
Sbjct: 207 GMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKG 266

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
           C+  ++     LL++Y+K G++  A R+FE+M +  ++ W+ MIA YA+      A+ LF
Sbjct: 267 CYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLF 326

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M +  + P+ +   S+L ACA    L++GK +H  + +  + S+++VSNA+MD+YAKC
Sbjct: 327 LRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKC 386

Query: 417 GSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACIL 465
           G + ++  +F ++P ++ V+WNT+I           A++LF  ML+ + +P  VT + +L
Sbjct: 387 GEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVL 446

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
            A ASLAALE G +IH   ++   + D  VAN+++DMY KCG +  AR  FD +  +D +
Sbjct: 447 RASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEV 506

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           SW  MI GY MHG   +A+  F+ M+    +P++++F+ VL ACS++GL+ +G   F  M
Sbjct: 507 SWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESM 566

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
             + +I+P +EHY CMV LL R G   EA + I  +   P   +W +LL  C IH +V L
Sbjct: 567 SKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDL 626

Query: 646 AEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
               A+HV E+EP +   +VLL+N+YA A +W+ V  +R+ + ++ ++K PG SW+E +G
Sbjct: 627 GRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQG 686

Query: 706 KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEK 765
            V+ F  G +SHP  K I ++L+ L  + +  GY P     L++  + EKE  L  HSE+
Sbjct: 687 VVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSER 746

Query: 766 LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCS 825
           LA+A+G++  P   +IR+ KNLR+C DCH + K +SK  +REIV+RD NRFHHF+ G CS
Sbjct: 747 LALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCS 806

Query: 826 CRGFW 830
           C  +W
Sbjct: 807 CGDYW 811



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/458 (23%), Positives = 191/458 (41%), Gaps = 89/458 (19%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I R+ +    ++A+++     ++ +  +  T+ S+LQ CA   SL+ GK++HS + + G+
Sbjct: 310 IARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGL 369

Query: 128 VIDDGVLGSKLVF-MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
             +  V  S  +  ++  CG+++   ++F ++ +     WN ++  Y + G+ + ++ LF
Sbjct: 370 --NSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLF 427

Query: 187 KKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR------- 215
             M    +     T+S VL+  A                        VV NS        
Sbjct: 428 THMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKC 487

Query: 216 -RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
            R+ DA   FD+++ RD VSWN MI GY  +G++ + L +F  M +     +  T V VL
Sbjct: 488 GRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVL 547

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S C+N G L  G+A                     +  SK  D+   I            
Sbjct: 548 SACSNAGLLYKGQA-------------------HFESMSKDYDIKPCIE----------- 577

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
            +T M+    R G FD A++L   +     +P V    ++L AC     +++G+    ++
Sbjct: 578 HYTCMVWLLGRLGRFDEAMKLIGEI---AYQPSVMVWRALLGACVIHKKVDLGRVCAQHV 634

Query: 395 KE---NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VSWNTMIGALDL 446
            E   +D  + + +SN    MYA  G   +   V   M  K +     +SW    G +  
Sbjct: 635 LEMEPHDDATHVLLSN----MYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHY 690

Query: 447 FVAMLQNFEPDGVTMACILPACASLAALERGREIHGYI 484
           F ++     PD      I   CA L  L +     GY+
Sbjct: 691 F-SVGDTSHPD------IKLICAMLEWLNKKTRDAGYV 721



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 138/325 (42%), Gaps = 36/325 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
            +N  I  + ++G+ E+AM +     +  +     TY S+L+  A L +LE G ++HS+ 
Sbjct: 406 TWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLT 465

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++ +   D V+ + L+ M+  CG + + R  F+K++      WN ++  YS  G   E+
Sbjct: 466 IKT-MYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEA 524

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVS----WNC 237
           L LF  MQ      +  TF  V   L+   N+  +      F+ +S D D+      + C
Sbjct: 525 LNLFDMMQHTDCKPNKLTFVGV---LSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTC 581

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR--AVHAFALK 295
           M+      G  ++ +++  E   + +   +     +L  C     +  GR  A H   ++
Sbjct: 582 MVWLLGRLGRFDEAMKLIGE---IAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEME 638

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV-----VSWTSMIAGYAREGVFD 350
                + + +  L +MY+  G  D    V + M ++ V     +SW              
Sbjct: 639 P---HDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVEN----------Q 685

Query: 351 GAIRLFRGMVREGIEPDVYAITSIL 375
           G +  F   V +   PD+  I ++L
Sbjct: 686 GVVHYFS--VGDTSHPDIKLICAML 708


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 272/782 (34%), Positives = 430/782 (54%), Gaps = 50/782 (6%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D  T    L++C  L     G++VH    +SG  ++D  +G+ LV M++   D ++GR 
Sbjct: 102 VDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGF-LEDVSVGTSLVDMYMKTEDFEDGRG 160

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA---- 209
           +F+++    V  W  L+  Y++ G   E ++L  +MQ  G+  + +TF+ VL  LA    
Sbjct: 161 IFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESI 220

Query: 210 ----------VVGN------------------SRRVKDAHKLFDELSDRDVVSWNCMISG 241
                     +V N                  S  V DA  +FD +  RD V+WN MI G
Sbjct: 221 IEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGG 280

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y A G   +G ++F  M   G  +      T L  C+    L F + +H   +K  +   
Sbjct: 281 YAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFA 340

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                 L+  YSKC  +D A ++F       +VV+WT+MI G+ +    + A+ LF  M 
Sbjct: 341 QDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMS 400

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           REG+ P+ +  +++L A     LL     +H  I +   +    V+ AL+D Y K G++ 
Sbjct: 401 REGVRPNHFTYSTVL-AGKPSSLL---SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVV 456

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACA 469
           ++  VF  +P KDIV+W+ M+           A+++F+ ++ +  +P+  T + ++ AC+
Sbjct: 457 ESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACS 516

Query: 470 SLAA-LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           S AA +E G++IH   ++ G S    V++A++ MY K G +  A  +F     +D++SW 
Sbjct: 517 SSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWN 576

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI GYG HG    A+  F  M+  G+  D+V+FI VL AC+H+GLV+EG ++FN+M  +
Sbjct: 577 SMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKD 636

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
            +I+ K+EHY+CMVDL SR G   +A   I  MP     TIW +LL  CR+H  ++L + 
Sbjct: 637 YHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKL 696

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            AE +  L+P++   YVLL+N++A A  WEE   +R+ +  R +KK  GCSWIEIK ++ 
Sbjct: 697 AAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIF 756

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            F+AG  SHP +  + + L+ L +++K  GY P T Y   + +E  KE  L  HSE+LA+
Sbjct: 757 SFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAI 816

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           A+G++ LP G  I++ KNLR+CGDCH + + +S    R +++RDSNRFHHFK G CSC G
Sbjct: 817 AYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGG 876

Query: 829 FW 830
           +W
Sbjct: 877 YW 878



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 255/511 (49%), Gaps = 29/511 (5%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           + L  +    R + AH+LFDE   +D+  +N ++  +  N    + L +FK++ + G  V
Sbjct: 43  QSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGV 102

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T+   L  C      + GR VH  +LK+ F +++S   +L+DMY K  D +    +F
Sbjct: 103 DGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIF 162

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++MG ++VVSWTS+++GYAR G+ D  I L   M  EG+ P+ +   ++L A A + ++E
Sbjct: 163 DEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIE 222

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
            G  VH  I +N  + + +V NAL+ MY K   + DAE+VF+ M V+D V+WN MIG   
Sbjct: 223 GGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYA 282

Query: 443 ALDLFVAMLQNFEP---DGVTMA-----CILPACASLAALERGREIHGYILRHGISADRN 494
           A+  ++   Q F      GV ++       L  C+    L   +++H  ++++G    ++
Sbjct: 283 AIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD 342

Query: 495 VANAIVDMYVKCGVLVLARSLFDMI-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
           +  A++  Y KC  +  A  LF M   A ++++WT MI G+  +     A+  F  M + 
Sbjct: 343 IRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSRE 402

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA-CMVDLLSRTGNLS 612
           G+ P+  ++ +VL A   S L+ +         YE     K+   A  ++D   +TGN+ 
Sbjct: 403 GVRPNHFTYSTVL-AGKPSSLLSQLHAQIIKAYYE-----KVPSVATALLDAYVKTGNVV 456

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL-----EPDNTGYYVLL 667
           E+ R    +P A D   W ++L G     + + +EK  E   +L     +P+   +  ++
Sbjct: 457 ESARVFYSIP-AKDIVAWSAMLTGLA---QTRDSEKAMEVFIQLVKEGVKPNEYTFSSVI 512

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
               + A   E  K++     + G K N  C
Sbjct: 513 NACSSSAATVEHGKQIHATAVKSG-KSNALC 542



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 144/545 (26%), Positives = 245/545 (44%), Gaps = 49/545 (8%)

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           +   ++F++     +  +N L+ ++S+  + +E+L+LFK + S G+  D  T SC LK  
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 209 AV------------------------VGNS--------RRVKDAHKLFDELSDRDVVSWN 236
            V                        VG S           +D   +FDE+  ++VVSW 
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            ++SGY  NG+ ++ + +  +M   G N +  T  TVL   A+   +  G  VHA  +K 
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            F       N L+ MY K   +  A  VF+ M  R  V+W  MI GYA  G +    ++F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M   G++       + L  C+    L   K +H  + +N  + +  +  ALM  Y+KC
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKC 354

Query: 417 GSMADAESVFNQM-PVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACI 464
            S+ +A  +F+      ++V+W  MIG          A+DLF  M  +   P+  T + +
Sbjct: 355 SSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTV 414

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           L    S        ++H  I++       +VA A++D YVK G +V +  +F  IPAKD+
Sbjct: 415 LAGKPSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDI 470

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           ++W+ M+ G         A+  F  + + G++P+E +F SV+ ACS S    E  +  + 
Sbjct: 471 VAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVK 644
              +      L   + ++ + S+ GN+  A +         D   W S++ G   H + K
Sbjct: 531 TAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQHGDAK 589

Query: 645 LAEKV 649
            A +V
Sbjct: 590 KALEV 594



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 202/425 (47%), Gaps = 35/425 (8%)

Query: 53  ASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLK 110
           A     +V  +  +N  IG +  +G   +  ++ +    +  K+    +C+ L+LC+  +
Sbjct: 261 AVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQR 320

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG-KVFIWNLL 169
            L   K++H  + ++G      +  + L+  +  C  + E  ++F+  D    V  W  +
Sbjct: 321 ELNFTKQLHCGVVKNGYEFAQDIR-TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAM 379

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------------------------ 205
           +  + +  N ++++ LF +M   G+  + +T+S VL                        
Sbjct: 380 IGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVP 439

Query: 206 ----KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                 L     +  V ++ ++F  +  +D+V+W+ M++G      +EK +EVF +++  
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499

Query: 262 GFNVDLATMVTVLSGCANCGALM-FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
           G   +  T  +V++ C++  A +  G+ +HA A+K+  S  +  ++ LL MYSK G+++ 
Sbjct: 500 GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIES 559

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A +VF +  ER +VSW SMI GY + G    A+ +F+ M  +G+  D      +L AC  
Sbjct: 560 AEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTH 619

Query: 381 DGLLEIGKDVHD-YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WN 438
            GL+E G+   +  IK+  +   +   + ++D+Y++ G    A  + N MP     + W 
Sbjct: 620 AGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWR 679

Query: 439 TMIGA 443
           T++ A
Sbjct: 680 TLLAA 684


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/777 (33%), Positives = 430/777 (55%), Gaps = 49/777 (6%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L+ C    +LE GK +H  + +SG+ +D  +L S L+ ++  CGD +    +F  + + 
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNS-LITLYSKCGDWENALSIFRNMGHH 103

Query: 162 K--VFIWNLLMHEYSKTGNFKESLYLFKKMQSLG---IAADSYTFSCVLKC--------- 207
           K  +  W+ ++  ++       +L  F  M       I  + Y F+ +L+          
Sbjct: 104 KRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163

Query: 208 -LAVVG------------------------NSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
            LA+                              ++ A  +FD++  +++V+W  MI+ Y
Sbjct: 164 GLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRY 223

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
              G+ +  +++F  +L   +  D  T+ ++LS C        G+ +H++ +++  + ++
Sbjct: 224 SQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDV 283

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
               TL+DMY+K   ++ + ++F  M   +V+SWT++I+GY +      AI+LF  M+  
Sbjct: 284 FVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHG 343

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
            + P+ +  +S+L ACA      IGK +H    +  + +   V N+L++MYA+ G+M  A
Sbjct: 344 HVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECA 403

Query: 423 ESVFNQMPVKDIVSWNTMIGA----LDLFVAMLQNFEPDGV-----TMACILPACASLAA 473
              FN +  K+++S+NT   A    LD   +     E  GV     T AC+L   A +  
Sbjct: 404 RKAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGT 463

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           + +G +IH  I++ G   +  + NA++ MY KCG    A  +F+ +  +++I+WT +I+G
Sbjct: 464 IVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISG 523

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           +  HGF   A+  F +M + G++P+EV++I+VL ACSH GL+DE W+ FN M Y  +I P
Sbjct: 524 FAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISP 583

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
           ++EHYACMVDLL R+G L EA  FI  MP   DA +W + L  CR+H   KL E  A+ +
Sbjct: 584 RMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKI 643

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
            E EP +   Y+LL+N+YA   +W++V  LR+ + ++ L K  G SWIE+  +V+ F  G
Sbjct: 644 LEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVG 703

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
            +SHP A+KI   L  L L++K  GY P T + L + ++ +KE  L  HSEK+A+A+ ++
Sbjct: 704 DTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALI 763

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           + P  + IRV KNLRVCGDCH   K++S    REIV+RD+NRFHH KDG+CSC  +W
Sbjct: 764 STPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 263/557 (47%), Gaps = 40/557 (7%)

Query: 141 MFVTCGDLK--EGRRVFNKID---NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           +++   DLK    R+  +++D      +   +LL+    ++GN +    L  K+   G+ 
Sbjct: 12  IYLQAKDLKFESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLP 71

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS--DRDVVSWNCMISGYIANGVAEKGLE 253
            DS   + ++   +  G+    ++A  +F  +    RD+VSW+ +IS +  N +  + L 
Sbjct: 72  LDSVLLNSLITLYSKCGD---WENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALL 128

Query: 254 VFKEMLNLGFNVDLAT---MVTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLL 309
            F  ML    N+          +L  C+N      G A+ AF LK   F   +     L+
Sbjct: 129 TFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALI 188

Query: 310 DMYSKCG-DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           DM++K G D+  A  VF+KM  +++V+WT MI  Y++ G+ D A+ LF  ++     PD 
Sbjct: 189 DMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDK 248

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           + +TS+L AC       +GK +H ++  + + S ++V   L+DMYAK  ++ ++  +FN 
Sbjct: 249 FTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNT 308

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG 477
           M   +++SW  +I           A+ LF  ML  +  P+  T + +L ACASL     G
Sbjct: 309 MLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIG 368

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           +++HG  ++ G+S    V N++++MY + G +  AR  F+++  K+LIS+         +
Sbjct: 369 KQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYN---TAADAN 425

Query: 538 GFGCDAIATFN-DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
               D+  +FN ++   G+     ++  +L   +  G + +G +   ++  +      L 
Sbjct: 426 AKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALI-VKSGFGTNLC 484

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
               ++ + S+ GN   A +    M    +   W S++ G   H     A K  E  +E+
Sbjct: 485 INNALISMYSKCGNKEAALQVFNDMGYR-NVITWTSIISGFAKH---GFATKALELFYEM 540

Query: 657 -----EPDNTGYYVLLA 668
                +P+   Y  +L+
Sbjct: 541 LEIGVKPNEVTYIAVLS 557



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 202/412 (49%), Gaps = 43/412 (10%)

Query: 70  IGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           I R+ ++G L+ A+++   L  SE +  D  T  S+L  C +L+    GK++HS +  SG
Sbjct: 220 ITRYSQLGLLDDAVDLFCRLLVSEYTP-DKFTLTSLLSACVELEFFSLGKQLHSWVIRSG 278

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
           +   D  +G  LV M+     ++  R++FN + +  V  W  L+  Y ++   +E++ LF
Sbjct: 279 LA-SDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLF 337

Query: 187 KKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR------- 215
             M    +  + +TFS VLK  A                         VGNS        
Sbjct: 338 CNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARS 397

Query: 216 -RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK-EMLNLGFNVDLATMVTV 273
             ++ A K F+ L +++++S+N   +   AN  A    E F  E+ + G      T   +
Sbjct: 398 GTMECARKAFNILFEKNLISYN---TAADANAKALDSDESFNHEVEHTGVGASPFTYACL 454

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           LSG A  G ++ G  +HA  +K+ F   +  NN L+ MYSKCG+ + A++VF  MG R+V
Sbjct: 455 LSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNV 514

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL-EIGKDVHD 392
           ++WTS+I+G+A+ G    A+ LF  M+  G++P+     ++L AC+  GL+ E  K  + 
Sbjct: 515 ITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNS 574

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
               + +   +     ++D+  + G + +A    N MP   D + W T +G+
Sbjct: 575 MHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGS 626



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 222/487 (45%), Gaps = 50/487 (10%)

Query: 99  YC--SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG-DLKEGRRVF 155
           YC  ++L+ C++      G  + + + ++G       +G  L+ MF   G D++  R VF
Sbjct: 146 YCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVF 205

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK--------- 206
           +K+ +  +  W L++  YS+ G   +++ LF ++       D +T + +L          
Sbjct: 206 DKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFS 265

Query: 207 ---------------------CLAV--VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                C  V     S  V+++ K+F+ +   +V+SW  +ISGY+
Sbjct: 266 LGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYV 325

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            +   ++ +++F  ML+     +  T  +VL  CA+      G+ +H   +K   S    
Sbjct: 326 QSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINC 385

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N+L++MY++ G ++ A + F  + E++++S+ +  A  A     D        +   G
Sbjct: 386 VGNSLINMYARSGTMECARKAFNILFEKNLISYNT--AADANAKALDSDESFNHEVEHTG 443

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           +    +    +L   AC G +  G+ +H  I ++   ++L ++NAL+ MY+KCG+   A 
Sbjct: 444 VGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAAL 503

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLA 472
            VFN M  +++++W ++I           AL+LF  ML+   +P+ VT   +L AC+ + 
Sbjct: 504 QVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVG 563

Query: 473 ALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIM 530
            ++   +  +     H IS        +VD+  + G+L+ A    + +P   D + W   
Sbjct: 564 LIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTF 623

Query: 531 IAGYGMH 537
           +    +H
Sbjct: 624 LGSCRVH 630



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 12/185 (6%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           TY  +L   A + ++  G+++H++I +SG   +   + + L+ M+  CG+ +   +VFN 
Sbjct: 450 TYACLLSGAACIGTIVKGEQIHALIVKSGFGTN-LCINNALISMYSKCGNKEAALQVFND 508

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +    V  W  ++  ++K G   ++L LF +M  +G+  +  T+  VL   + VG    +
Sbjct: 509 MGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVG---LI 565

Query: 218 KDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
            +A K F+ +     +S     + CM+     +G+  + +E    M    F+ D     T
Sbjct: 566 DEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSM---PFDADALVWRT 622

Query: 273 VLSGC 277
            L  C
Sbjct: 623 FLGSC 627


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/759 (36%), Positives = 418/759 (55%), Gaps = 65/759 (8%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +  +T+ ++L+ C   + L  GK +H++  +S ++     L +    ++  CG L   + 
Sbjct: 7   LQLQTFRNLLKACIAQRDLITGKILHALYFKS-LIPPSTYLSNHFTLLYSKCGSLHNAQT 65

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
            F+      VF +N L++ Y+K               SL                     
Sbjct: 66  SFHLTQYPNVFSYNTLINAYAK--------------HSL--------------------- 90

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
              +  A ++FDE+   D+VS+N +I+ Y   G     L +F+E+  L   +D  T+  V
Sbjct: 91  ---IHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGV 147

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE--- 330
           ++ C +   L+  R +H F +        S NN +L  YS+ G L  A RVF +MGE   
Sbjct: 148 ITACGDDVGLV--RQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGG 205

Query: 331 RSVVSWTSMIA--GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
           R  VSW +MI   G  REG+   A+ LFR MVR G++ D++ + S+L A  C   L  G+
Sbjct: 206 RDEVSWNAMIVACGQHREGM--EAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGR 263

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKC-GSMADAESVFNQMPVKDIVSWNTMIGALDL- 446
             H  + ++    + +V + L+D+Y+KC GSM +   VF ++   D+V WNTMI    L 
Sbjct: 264 QFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLY 323

Query: 447 ----------FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADR-N 494
                     F  M +N F PD  +  C+  AC++L++   G+++H   ++  +  +R +
Sbjct: 324 EDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVS 383

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V NA+V MY KCG +  AR +FD +P  + +S   MIAGY  HG   +++  F  M +  
Sbjct: 384 VNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKD 443

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           I P+ ++FI+VL AC H+G V+EG ++FNMM+    IEP+ EHY+CM+DLL R G L EA
Sbjct: 444 IAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEA 503

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
            R IE MP  P +  W +LL  CR H  V+LA K A     LEP N   YV+L+N+YA A
Sbjct: 504 ERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASA 563

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +WEE   ++  +  RG+KK PGCSWIEI  KV++FVA  +SHP  K+I   + ++  +M
Sbjct: 564 ARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKM 623

Query: 735 KREGYFPKTRYALINADEM---EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
           K+ GY P  R+AL+  +E+   E+E  L  HSEKLA+AFG+++   G  I V KNLR+CG
Sbjct: 624 KQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICG 683

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   K +S    REI +RD++RFH FK+G CSCR +W
Sbjct: 684 DCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 188/408 (46%), Gaps = 51/408 (12%)

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
           + + L T   +L  C     L+ G+ +HA   K+        +N    +YSKCG L  A 
Sbjct: 5   YPLQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQ 64

Query: 323 -------------------------------RVFEKMGERSVVSWTSMIAGYAREGVFDG 351
                                          RVF+++ +  +VS+ ++IA YA  G    
Sbjct: 65  TSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGP 124

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACD-GLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            +RLF  +    +  D + ++ ++ AC  D GL+   + +H ++          V+NA++
Sbjct: 125 TLRLFEEVRELRLGLDGFTLSGVITACGDDVGLV---RQLHCFVVVCGHDCYASVNNAVL 181

Query: 411 DMYAKCGSMADAESVFNQMPV---KDIVSWNTMI----------GALDLFVAMLQN-FEP 456
             Y++ G +++A  VF +M     +D VSWN MI           A+ LF  M++   + 
Sbjct: 182 ACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKV 241

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC-GVLVLARSL 515
           D  TMA +L A   +  L  GR+ HG +++ G   + +V + ++D+Y KC G +V  R +
Sbjct: 242 DMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKV 301

Query: 516 FDMIPAKDLISWTIMIAGYGMH-GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           F+ I A DL+ W  MI+G+ ++     D +  F +M++ G  PD+ SF+ V  ACS+   
Sbjct: 302 FEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSS 361

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
              G +   +         ++     +V + S+ GN+ +A R  + MP
Sbjct: 362 PSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP 409



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 141/325 (43%), Gaps = 39/325 (12%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC-GDLKEG 151
           K+D  T  S+L     +K L  G++ H ++ +SG   +  V GS L+ ++  C G + E 
Sbjct: 240 KVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHV-GSGLIDLYSKCAGSMVEC 298

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKES-LYLFKKMQSLGIAADSYTFSCVLKC--- 207
           R+VF +I    + +WN ++  +S   +  E  L+ F++MQ  G   D  +F CV      
Sbjct: 299 RKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSN 358

Query: 208 ------------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNC 237
                                         +A+      V DA ++FD + + + VS N 
Sbjct: 359 LSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNS 418

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA-VHAFALKA 296
           MI+GY  +GV  + L +F+ ML      +  T + VLS C + G +  G+   +    + 
Sbjct: 419 MIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERF 478

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRL 355
           C   E    + ++D+  + G L  A R+ E M      + W +++    + G  + A++ 
Sbjct: 479 CIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKA 538

Query: 356 FRGMVR-EGIEPDVYAITSILHACA 379
               +R E      Y + S ++A A
Sbjct: 539 ANEFLRLEPYNAAPYVMLSNMYASA 563


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 278/808 (34%), Positives = 439/808 (54%), Gaps = 55/808 (6%)

Query: 73   FCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
            + + GN  + + V     +  +  +  T+ ++   C  L+    G +V   I + G   +
Sbjct: 922  YSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGF--E 979

Query: 131  DGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
            D V + + L+ MF +   ++E   VF+ ++   +  WN ++  Y+  G  +ESL  F  M
Sbjct: 980  DSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM 1039

Query: 190  QSLGIAADSYTF-----------------------------SCVLKC---LAVVGNSRRV 217
            + L    +S T                              S V  C   L +   + R 
Sbjct: 1040 RHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRS 1099

Query: 218  KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
            +DA  +F  +++RD++SWN M++ Y+ +G    GL++  E+L +G  ++  T  + L+ C
Sbjct: 1100 EDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAAC 1159

Query: 278  ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
            +N   L+  + VHA  + A F   +   N L+ MY K G +  A +V + M +   V+W 
Sbjct: 1160 SNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWN 1219

Query: 338  SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC-ACDGLLEIGKDVHDYIKE 396
            ++I G+A     + A++ ++ +  +GI  +   + S+L AC A D LL+ G  +H +I  
Sbjct: 1220 ALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVL 1279

Query: 397  NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDL 446
               +S  YV N+L+ MYAKCG +  +  +F+ +  K  ++WN M+ A          L +
Sbjct: 1280 TGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKI 1339

Query: 447  FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
            F  M       D  + +  L A A+LA LE G+++HG +++ G  +D +V NA +DMY K
Sbjct: 1340 FGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGK 1399

Query: 506  CGVLVLARSLFDMIPA---KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
            CG +     +  M+P    +  +SW I+I+ +  HG    A  TF++M + G +PD V+F
Sbjct: 1400 CGEM---HDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTF 1456

Query: 563  ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
            +S+L AC+H GLVDEG  +++ M  E  + P +EH  C++DLL R+G LS A  FI+ MP
Sbjct: 1457 VSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMP 1516

Query: 623  VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
            V P+   W SLL  CRIH  ++LA K AEH+ EL+P +   YVL +NV A + KWE+V+ 
Sbjct: 1517 VPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVEN 1576

Query: 683  LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
            LR+++    +KK P CSW+++K KV+ F  G   HP A +I + L  L    K  GY P 
Sbjct: 1577 LRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPD 1636

Query: 743  TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
            T +AL + DE +KE  L  HSE+LA+AFG++N P   T+R+ KNLRVCGDCH + KF+S 
Sbjct: 1637 TSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSG 1696

Query: 803  TARREIVLRDSNRFHHFKDGRCSCRGFW 830
               R+IVLRD  RFHHF  G+CSC  +W
Sbjct: 1697 IVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724



 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 184/499 (36%), Positives = 284/499 (56%), Gaps = 12/499 (2%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +FD + +R VVSW  M+SGY  NG  EK   +F +M + G   +  T  + L  C +
Sbjct: 84  ARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTS 143

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L  G  V     K  F + +   + L+D +SKCG ++ A  +F  M ER VVSW +M
Sbjct: 144 LRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAM 203

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I GYA +G  D +  +FR M+R G+ PD Y + S+L A A  G L I   +H  I +   
Sbjct: 204 IGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGY 263

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-----------GALDLFV 448
            S   V+  L++ YAK GS+  A+ +   M  KD+ S   +I            ALDLF 
Sbjct: 264 GSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFK 323

Query: 449 AMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            M Q N   D V +  +L  CA+LA+   G +IH + L++  S D  + NA++DMY K G
Sbjct: 324 EMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSG 383

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            +  A+  FD +  K++ISWT +I+GY  HG+G  A++ +  M   G +P++V+F+S+L+
Sbjct: 384 EIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLF 443

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSH+GL  EG   FN M  + NI+P+ EHY+CMVDL +R G L EAY  +  + +  +A
Sbjct: 444 ACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNA 503

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
           ++WG++L    I+  + L ++ A ++F ++P+N+  YV+LA++Y+ A  W++  K+R+ +
Sbjct: 504 SLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLM 563

Query: 688 SRRGLKKNPGCSWIEIKGK 706
             R  KKN G S+ +   K
Sbjct: 564 EERSTKKNAGYSFFQATKK 582



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 164/602 (27%), Positives = 287/602 (47%), Gaps = 49/602 (8%)

Query: 113  EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHE 172
            ++G +VH  + ++GI + D  +G+ LV  + + G +   +++F ++ +  V  W  LM  
Sbjct: 863  DEGFQVHGFVVKTGI-LGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVG 921

Query: 173  YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV---------------------- 210
            YS +GN  E L ++++M+  G++ +  TF+ V     +                      
Sbjct: 922  YSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDS 981

Query: 211  --VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
              V NS          V++A  +FD +++ D++SWN MIS Y  +G+  + L  F  M +
Sbjct: 982  VSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRH 1041

Query: 261  LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
            L    +  T+ ++LS C++   L +GR +H   +K      +   NTLL +YS+ G  + 
Sbjct: 1042 LHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSED 1101

Query: 321  AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
            A  VF+ M ER ++SW SM+A Y ++G     +++   +++ G   +     S L AC+ 
Sbjct: 1102 AELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSN 1161

Query: 381  DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
               L   K VH  I        L V NAL+ MY K G M +A+ V   MP  D V+WN +
Sbjct: 1162 PECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNAL 1221

Query: 441  IG----------ALDLFVAMLQNFEP-DGVTMACILPAC-ASLAALERGREIHGYILRHG 488
            IG          A+  +  + +   P + +TM  +L AC A    L+ G  IH +I+  G
Sbjct: 1222 IGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTG 1281

Query: 489  ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
              +D  V N+++ MY KCG L  +  +FD +  K  I+W  M+A    HG G +A+  F 
Sbjct: 1282 FESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFG 1341

Query: 549  DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            +MR  G+  D+ SF   L A ++  +++EG +   ++  +   E  L      +D+  + 
Sbjct: 1342 EMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLV-IKLGFESDLHVTNAAMDMYGKC 1400

Query: 609  GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDNTGYYVL 666
            G + +  + +   P+      W  L+     H   + A +    + +L  +PD+  +  L
Sbjct: 1401 GEMHDVLKMLP-QPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSL 1459

Query: 667  LA 668
            L+
Sbjct: 1460 LS 1461



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 270/568 (47%), Gaps = 55/568 (9%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           ++I   C +G L +A+++L SS  +++D   Y  ILQLC D K+ + G  +H+ +  +G 
Sbjct: 3   SKIQSACNLGRLAEALKLL-SSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGF 61

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              D  L +KL+  +V  GD+   R VF+ +    V  W  ++  YS+ G F+++  LF 
Sbjct: 62  G-SDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFS 120

Query: 188 KMQSLGIAADSYTFSCVLK------CL-------AVVGNSR------------------- 215
            M+  G+ A+ +T+   L+      CL         +   R                   
Sbjct: 121 DMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCG 180

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           +++DA  LF  + +RDVVSWN MI GY   G A+    +F+ ML  G   D  T+ +VL 
Sbjct: 181 KMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLR 240

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
             A  G L+    +H    +  +         L++ Y+K G L  A  + + M ++ + S
Sbjct: 241 ASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFS 300

Query: 336 WTSMIAGYAREGVFD-GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
            T++I GYA EG++   A+ LF+ M +  I  D   + S+L+ CA      +G  +H + 
Sbjct: 301 STALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFA 360

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
            +      + + NAL+DMYAK G + DA+  F++M  K+++SW ++I           A+
Sbjct: 361 LKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAV 420

Query: 445 DLFVAM-LQNFEPDGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVDM 502
            L+  M  + F+P+ VT   +L AC+       G E  +  + ++ I       + +VD+
Sbjct: 421 SLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDL 480

Query: 503 YVKCGVLVLARSLFDMIPAKDLIS-WTIMIAG---YGMHGFGCDAIATFNDMRQAGIEPD 558
           + + G+L  A +L   I  K   S W  ++     YG    G +A +   +M+      +
Sbjct: 481 FARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQ----PEN 536

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMR 586
            V+++ +    S +GL D+ W+   +M 
Sbjct: 537 SVNYVVLASIYSAAGLWDDAWKIRKLME 564



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 206/420 (49%), Gaps = 22/420 (5%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           +D +  + +L  C +  A   G  +H   +   F  ++  N  L+  Y K GD+  A  V
Sbjct: 28  LDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNV 87

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F+ M ERSVVSWT+M++GY++ G F+ A  LF  M   G++ + +   S L AC     L
Sbjct: 88  FDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCL 147

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL 444
           ++G  V   I++     +L+V +AL+D ++KCG M DA  +F  M  +D+VSWN MIG  
Sbjct: 148 DMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGY 207

Query: 445 D----------LFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                      +F +ML+    PD  T+  +L A A    L    +IHG I + G  +  
Sbjct: 208 AVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYD 267

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG-FGCDAIATFNDMRQ 552
            V   +++ Y K G L  A+ L   +  KDL S T +I GY   G +  DA+  F +M Q
Sbjct: 268 IVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQ 327

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNM-MRYECNIEPKLEHYACMVDLLSRTGNL 611
             I  D+V   S+L  C++      G +     ++Y+ + +  + +   ++D+ +++G +
Sbjct: 328 MNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGN--ALIDMYAKSGEI 385

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRI----HHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            +A R  + M    +   W SL+ G       H  V L +K+    F  +P++  +  LL
Sbjct: 386 EDAKRAFDEME-EKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGF--KPNDVTFLSLL 442



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 223/450 (49%), Gaps = 50/450 (11%)

Query: 217  VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
            ++ A  +FDE+  R+  SW+ M+SGY+  G+ E+ + +F +M  LG   +   + ++++ 
Sbjct: 795  IEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITA 854

Query: 277  CANCGALM-FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C+  G +   G  VH F +K     ++     L+  Y   G +  A ++FE+M + +VVS
Sbjct: 855  CSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVS 914

Query: 336  WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE---IGKDVHD 392
            WTS++ GY+  G     + +++ M +EG+  +     ++  +C   GLLE   +G  V  
Sbjct: 915  WTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLG 971

Query: 393  YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA--------- 443
            +I +   + S+ V+N+L+ M++   S+ +A  VF+ M   DI+SWN MI A         
Sbjct: 972  HIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRE 1031

Query: 444  -LDLFVAM--LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             L  F  M  L N E +  T++ +L  C+S+  L+ GR IHG +++ G+ ++  + N ++
Sbjct: 1032 SLRCFHWMRHLHN-ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLL 1090

Query: 501  DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
             +Y + G    A  +F  +  +DLISW  M+A Y   G   D +    ++ Q G   + V
Sbjct: 1091 TLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHV 1150

Query: 561  SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY--------------ACMVDLLS 606
            +F S L ACS+                EC IE K+ H                 +V +  
Sbjct: 1151 TFASALAACSNP---------------ECLIESKIVHALIIVAGFHDFLIVGNALVTMYG 1195

Query: 607  RTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            + G + EA + ++ MP  PD   W +L+ G
Sbjct: 1196 KLGMMMEAKKVLQTMP-QPDRVTWNALIGG 1224



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 192/377 (50%), Gaps = 29/377 (7%)

Query: 200  TFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS--WNCMISGYIANGVAEKGLEVFKE 257
            T S ++    V   + +VKD     D+L   +  S  W C+  G IA        +VF +
Sbjct: 688  TASALINETPVENFAEQVKD-----DDLKTSNAGSRRWGCL-DGDIA--------KVFLQ 733

Query: 258  MLNLGFNVDLATMVTV-LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
              +  + +     V   L G +   + M G+A+HAF +    +  I   NTL++MYSK G
Sbjct: 734  QQHTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFG 793

Query: 317  DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
            +++ A  VF++M  R+  SW++M++GY R G+++ A+ LF  M   G+EP+ + + S++ 
Sbjct: 794  NIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLIT 853

Query: 377  ACACDGLL-EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            AC+  G + + G  VH ++ +  +   +YV  AL+  Y   G + +A+ +F +MP  ++V
Sbjct: 854  ACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVV 913

Query: 436  SWNT-MIGALDL-----FVAMLQNFEPDGV-----TMACILPACASLAALERGREIHGYI 484
            SW + M+G  D       + + Q    +GV     T A +  +C  L     G ++ G+I
Sbjct: 914  SWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHI 973

Query: 485  LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
            +++G     +VAN+++ M+     +  A  +FD +   D+ISW  MI+ Y  HG   +++
Sbjct: 974  IQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESL 1033

Query: 545  ATFNDMRQAGIEPDEVS 561
              F+ MR    E +  +
Sbjct: 1034 RCFHWMRHLHNETNSTT 1050


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 270/710 (38%), Positives = 400/710 (56%), Gaps = 46/710 (6%)

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---CL--AVVGN-------- 213
           N L+ E+S+    KE+L LF  ++  G   D  + SCVLK   CL   +VG         
Sbjct: 61  NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIK 120

Query: 214 -------------------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                              +  V+D  ++FDE+  ++VVSW  +++GY  NG+ E+ L++
Sbjct: 121 CGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKL 180

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
           F +M   G   +  T   VL G A  GA+  G  VH   +K+     I   N++++MYSK
Sbjct: 181 FSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK 240

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
              +  A  VF+ M  R+ VSW SMIAG+   G+   A  LF  M  EG++       ++
Sbjct: 241 SLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATV 300

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKD 433
           +  CA    +   K +H  + +N     L +  ALM  Y+KC  + DA  +F  M  V++
Sbjct: 301 IKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQN 360

Query: 434 IVSWNTMIG----------ALDLFVAML--QNFEPDGVTMACILPACAS-LAALERGREI 480
           +VSW  +I           A++LF  M   +  EP+  T + +L ACA+  A++E+G++ 
Sbjct: 361 VVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQF 420

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           H   ++ G S    V++A+V MY K G +  A  +F     +DL+SW  MI+GY  HG G
Sbjct: 421 HSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCG 480

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
             ++  F +MR   +E D ++FI V+ AC+H+GLV+EG R+F++M  + +I P +EHY+C
Sbjct: 481 KKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSC 540

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           MVDL SR G L +A   I  MP    ATIW +LL  CR+H  V+L E  AE +  L+P +
Sbjct: 541 MVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQD 600

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
           +  YVLL+N+YA A  W+E  K+R+ +  + +KK  G SWIE+K K   F+AG  SHP +
Sbjct: 601 SAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQS 660

Query: 721 KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
            +I   L+ L + +K  GY+P T+Y L + +E  KEV L  HSE+LA+AFG++  P G  
Sbjct: 661 DRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTP 720

Query: 781 IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           I++ KNLRVCGDCH + K +SK   R+IV+RDSNRFHHFK G CSC  +W
Sbjct: 721 IQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 150/494 (30%), Positives = 248/494 (50%), Gaps = 49/494 (9%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S  D  +   +L++C  L     GK+VH    + G V +D  +G+ LV M++    +++G
Sbjct: 88  SPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFV-EDVSVGTSLVDMYMKTESVEDG 146

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV- 210
            RVF+++    V  W  L+  Y + G  +++L LF +MQ  GI  + +TF+ VL  LA  
Sbjct: 147 ERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAAD 206

Query: 211 -----------------------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMI 239
                                  VGNS          V DA  +FD + +R+ VSWN MI
Sbjct: 207 GAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMI 266

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           +G++ NG+  +  E+F  M   G  +      TV+  CAN   + F + +H   +K    
Sbjct: 267 AGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSD 326

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
            +++    L+  YSKC ++D A ++F  M G ++VVSWT++I+GY + G  D A+ LF  
Sbjct: 327 FDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQ 386

Query: 359 MVR-EGIEPDVYAITSILHACAC-DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
           M R EG+EP+ +  +S+L+ACA     +E GK  H    ++   ++L VS+AL+ MYAK 
Sbjct: 387 MRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKR 446

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACIL 465
           G++  A  VF +   +D+VSWN+MI           +L +F  M  +N E DG+T   ++
Sbjct: 447 GNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVI 506

Query: 466 PACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKD 523
            AC     +  G+     +++ + I       + +VD+Y + G+L  A  L + +P    
Sbjct: 507 SACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAG 566

Query: 524 LISWTIMIAGYGMH 537
              W  ++A   +H
Sbjct: 567 ATIWRTLLAACRVH 580



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 165/336 (49%), Gaps = 34/336 (10%)

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
           ++F++  ++ +     ++  ++R      A+ LF G+ R G   D  +++ +L  C C  
Sbjct: 47  QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
              +GK VH    +      + V  +L+DMY K  S+ D E VF++M VK++VSW +++ 
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166

Query: 443 ----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                     AL LF  M L+  +P+  T A +L   A+  A+E+G ++H  +++ G+ +
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
              V N++V+MY K  ++  A+++FD +  ++ +SW  MIAG+  +G   +A   F  MR
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286

Query: 552 QAGIEPDEVSFISVLYACS-----------HSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
             G++  +  F +V+  C+           H  ++  G  F      + NI+  L     
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDF------DLNIKTAL----- 335

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           MV   S+   + +A++   MM    +   W +++ G
Sbjct: 336 MV-AYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISG 370


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 233/562 (41%), Positives = 354/562 (62%), Gaps = 12/562 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           T+L  C     L+ GR VHA  L++ F  +I   NTLL+MY+KCG L+ A +VFEKM +R
Sbjct: 65  TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             V+WT++I+GY++      A+  F  M+R G  P+ + ++S++ A A +     G  +H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
            +  +    S+++V +AL+D+Y + G M DA+ VF+ +  ++ VSWN +I          
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244

Query: 443 -ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            AL+LF  ML++ F P   + A +  AC+S   LE+G+ +H Y+++ G        N ++
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY K G +  AR +FD +  +D++SW  ++  Y  HGFG +A+  F +MR+ GI P+E+
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           SF+SVL ACSHSGL+DEGW ++ +M+ +  I P+  HY  +VDLL R G+L+ A RFIE 
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ P A IW +LL  CR+H   +L    AEHVFEL+PD+ G +V+L N+YA   +W + 
Sbjct: 424 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDA 483

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            ++R+K+   G+KK P CSW+EI+  +++FVA    HP  ++I    + +  ++K  GY 
Sbjct: 484 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 543

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T + +++ D+ E+EV L  HSEK+A+AF +LN P G TI + KN+RVCGDCH   K  
Sbjct: 544 PDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLA 603

Query: 801 SKTARREIVLRDSNRFHHFKDG 822
           SK   REI++RD+NRFHHFKD 
Sbjct: 604 SKVVGREIIVRDTNRFHHFKDA 625



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 193/383 (50%), Gaps = 36/383 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D + Y ++L+ C   K L  G+ VH+ I +S I   D V+G+ L+ M+  CG L+E R+V
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQS-IFRHDIVMGNTLLNMYAKCGSLEEARKV 117

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV---- 210
           F K+       W  L+  YS+     ++L  F +M   G + + +T S V+K  A     
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177

Query: 211 --------------------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGY 242
                               VG++          + DA  +FD L  R+ VSWN +I+G+
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
                 EK LE+F+ ML  GF     +  ++   C++ G L  G+ VHA+ +K+   K +
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG-EKLV 296

Query: 303 SF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +F  NTLLDMY+K G +  A ++F+++ +R VVSW S++  YA+ G    A+  F  M R
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
            GI P+  +  S+L AC+  GLL+ G   ++ +K++ +    +    ++D+  + G +  
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416

Query: 422 AESVFNQMPVKDIVS-WNTMIGA 443
           A     +MP++   + W  ++ A
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNA 439



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 186/369 (50%), Gaps = 14/369 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           +++A K+F+++  RD V+W  +ISGY  +      L  F +ML  G++ +  T+ +V+  
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
            A       G  +H F +K  F   +   + LLD+Y++ G +D A  VF+ +  R+ VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++IAG+AR    + A+ LF+GM+R+G  P  ++  S+  AC+  G LE GK VH Y+ +
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD----------L 446
           +  +   +  N L+DMYAK GS+ DA  +F+++  +D+VSWN+++ A             
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350

Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M +    P+ ++   +L AC+    L+ G   +  + + GI  +      +VD+  +
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410

Query: 506 CGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
            G L  A    + +P +   + W  ++    MH      +  +       ++PD+     
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMH--KNTELGAYAAEHVFELDPDDPGPHV 468

Query: 565 VLYACSHSG 573
           +LY    SG
Sbjct: 469 ILYNIYASG 477



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 75/373 (20%)

Query: 115 GKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
           G ++H    + G   D  V +GS L+ ++   G + + + VF+ +++     WN L+  +
Sbjct: 180 GHQLHGFCVKCGF--DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------------------------KCLA 209
           ++    +++L LF+ M   G     ++++ +                         K +A
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297

Query: 210 VVGN--------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
             GN        S  + DA K+FD L+ RDVVSWN +++ Y  +G  ++ +  F+EM  +
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G   +  + ++VL+ C++ G L  G   +    K     E     T++D+  + GDL+ A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
           +R  E+M                                   IEP      ++L+AC   
Sbjct: 418 LRFIEEM----------------------------------PIEPTAAIWKALLNACRMH 443

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VS 436
              E+G    +++ E D          L ++YA  G   DA  V  +M    +      S
Sbjct: 444 KNTELGAYAAEHVFELDPDDP-GPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 502

Query: 437 WNTMIGALDLFVA 449
           W  +  A+ +FVA
Sbjct: 503 WVEIENAIHMFVA 515


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 265/805 (32%), Positives = 444/805 (55%), Gaps = 62/805 (7%)

Query: 73  FCEVGNLEKAMEV----LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIV 128
           + ++GN E+A+E+    L S E    +  T  + L+ C+ L+    G +  +++ +SG  
Sbjct: 91  YGKIGNHEEALELFDSMLISGEYP--NEFTLSTALRSCSALREFNHGTRFQALVTKSGFD 148

Query: 129 IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
             + VLGS L+  +  CG  +E  RVF  ++NG +  W +++  + + G++ ++L L+ +
Sbjct: 149 -SNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHR 207

Query: 189 MQSLGIAADSYTFSCVLKCLAVVG-------------------------------NSRRV 217
           M   G+A + +TF  +L   + +G                                 + +
Sbjct: 208 MIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSI 267

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           +DA K+     + DV  W  +ISG+  +    + +  F EM   G   +  T   +L+ C
Sbjct: 268 EDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNAC 327

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL-DGAIRVFEKMGERSVVSW 336
           ++  AL  G+ +H+  + A    ++S  N+L+DMY KC ++ + A+R F  +   +V+SW
Sbjct: 328 SSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISW 387

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           TS+IAG++  G+ + +I++F  M   G+ P+ + +++IL AC     L   + +H YI +
Sbjct: 388 TSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIK 447

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           N+  + + V NAL+D YA  G + DA  V + M  +D++++ ++            AL++
Sbjct: 448 NNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNI 507

Query: 447 FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
              M ++    DG ++A  L A A +  +E G+++H Y ++ G+ +  +V+N +VD+Y K
Sbjct: 508 ITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGK 567

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           CG +  A   F  I   D +SW  +I G   +G    A++ F DMR AG+EPD+++ + V
Sbjct: 568 CGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLV 627

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           LYACSH GLVD G  +F  MR +  I P+L+HY C+VDLL R G L EA   IE MP  P
Sbjct: 628 LYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKP 687

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
           DA I+ +LL  C++H  + L E +A    EL+P +  +YVLLAN+Y ++ + E  +K R 
Sbjct: 688 DALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRR 747

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +  RG++KNPG SW+E +  V++F AG +SHP   KI   ++ L  + + +G +     
Sbjct: 748 MMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQFRNQGIW----- 802

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
                   ++  AL  HSEKLA+AFG+++ P    IR+ KN+R+C DCH+    +++   
Sbjct: 803 -------YQENRALAHHSEKLAVAFGLISTPPKAPIRIIKNIRICRDCHDFIMNVTRLVD 855

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REI++RD NRFH FK G CSCRG+W
Sbjct: 856 REIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 162/616 (26%), Positives = 297/616 (48%), Gaps = 53/616 (8%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           SKI+      I+  C + +S+ DG  +HS I + G   +D  L + L+ ++  C  + E 
Sbjct: 12  SKIEYSLLKDIVSFC-NSRSVRDGICIHSPIIKMGFQ-EDMFLSNNLLSLYGKCFGVAEA 69

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CLA- 209
           R++F+++    V  W +LM  Y K GN +E+L LF  M   G   + +T S  L+ C A 
Sbjct: 70  RQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSAL 129

Query: 210 ----------------------VVGNSRR--------VKDAHKLFDELSDRDVVSWNCMI 239
                                 V+G++           ++A+++F+ +++ D+VSW  M+
Sbjct: 130 REFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMV 189

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           S ++  G   + L+++  M+  G   +  T V +L+  +  G L +G+ VHA  +     
Sbjct: 190 SSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIE 248

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
             +     L+DMY KC  ++ A++V +   E  V  WT++I+G+ +   F  AI  F  M
Sbjct: 249 LNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEM 308

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
              G+ P+ +  + IL+AC+    L++GK +H  +    +++ + V N+L+DMY KC +M
Sbjct: 309 ETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNM 368

Query: 420 -ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPA 467
             DA   F  +   +++SW ++I           ++ +F AM      P+  T++ IL A
Sbjct: 369 IEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGA 428

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C ++ +L + R++HGYI+++    D  V NA+VD Y   G++  A  +  M+  +D+I++
Sbjct: 429 CGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITY 488

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
           T +       G    A+     M +  +  D  S  S L A +   +++ G +  +    
Sbjct: 489 TSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETG-KQLHCYSV 547

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
           +  +   +     +VDL  + G + +A+R F+E+    PDA  W  L+ G   +  V  A
Sbjct: 548 KSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEI--TEPDAVSWNGLIFGLASNGHVSSA 605

Query: 647 EKVAE--HVFELEPDN 660
               E   +  +EPD 
Sbjct: 606 LSAFEDMRLAGVEPDQ 621



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 200/418 (47%), Gaps = 38/418 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           + A I  F +     +A+   +  E S +  +  TY  IL  C+ + +L+ GK++HS + 
Sbjct: 285 WTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVV 344

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDL-KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +G+  +D  +G+ LV M++ C ++ ++  R F  I +  V  W  L+  +S+ G  +ES
Sbjct: 345 MAGLE-NDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEES 403

Query: 183 LYLFKKMQSLGIAADSYTFSCVL------KCLA------------------VVGNSR--- 215
           + +F  MQ +G+  +S+T S +L      K L                   VVGN+    
Sbjct: 404 IKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDA 463

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 V DA  +   +  RDV+++  + +     G  E  L +   M      +D  ++
Sbjct: 464 YAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSL 523

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + LS  A    +  G+ +H +++K+     IS +N L+D+Y KCG +  A R F ++ E
Sbjct: 524 ASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITE 583

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
              VSW  +I G A  G    A+  F  M   G+EPD      +L+AC+  GL+++G D 
Sbjct: 584 PDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDY 643

Query: 391 HDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
              ++E + ++  L     L+D+  + G + +A +V   MP K D + + T++GA  L
Sbjct: 644 FQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKL 701



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 115/282 (40%), Gaps = 27/282 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            Y +   R  + GN E A+ ++    K   ++D  +  S L   A +  +E GK++H   
Sbjct: 487 TYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYS 546

Query: 123 CESG----IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
            +SG    I + +G     LV ++  CG + +  R F +I       WN L+   +  G+
Sbjct: 547 VKSGLGSWISVSNG-----LVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGH 601

Query: 179 FKESLYLFKKMQSLGIAADSYT-----FSCVLKCLAVVGNS--RRVKDAHKLFDELSDRD 231
              +L  F+ M+  G+  D  T     ++C    L  +G    + +++ H +  +L    
Sbjct: 602 VSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLD--- 658

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
              + C++      G  E+ + V + M    F  D     T+L  C   G +  G  +  
Sbjct: 659 --HYVCLVDLLGRAGRLEEAMNVIETM---PFKPDALIYKTLLGACKLHGNIPLGEHMAR 713

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
             L+   S + +F   L ++Y   G  +   +    M ER V
Sbjct: 714 QGLELDPS-DPAFYVLLANLYDDSGRSELGEKTRRMMRERGV 754


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 258/658 (39%), Positives = 369/658 (56%), Gaps = 79/658 (12%)

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           + VF  ML  G   D   + TV+  CA   AL  G+ +H FAL +    +    ++LL M
Sbjct: 59  IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118

Query: 312 YSKCGDLDGAIRVFEKMGERSVV-----------------------------------SW 336
           Y +   L  A  VF+K+ +  VV                                   SW
Sbjct: 119 YVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSW 178

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
             MI+G+ R G +  A+ +F+ M  EG++PD  +++S+L A     +  +G  +H Y+ +
Sbjct: 179 NGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIK 238

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI---------------------- 434
             +    +V +AL+DMY KC   ++   VFN+M   D+                      
Sbjct: 239 QGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEV 298

Query: 435 -----------VSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLA 472
                      VSW +MI           AL+LF  M ++  +P+ VT+ C+LPAC ++A
Sbjct: 299 FKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIA 358

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           AL  G+  H + LR+GI  D  V +A++DMY KCG ++ +R  FDM+P ++L+SW  ++A
Sbjct: 359 ALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMA 418

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           GY MHG   +AI  F  M++ G +PD VSF  VL AC+  GL +EGW +F+ M     +E
Sbjct: 419 GYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVE 478

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
            ++EHY+CMV LL R+G L EAY  I+ MP  PD+ +WG+LL  CR+H+ V L E  A+ 
Sbjct: 479 ARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKR 538

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           VFELEP N G Y+LL+N+YA    W EV  +R+ +  RGLKKNPG SWIEIK KV++ +A
Sbjct: 539 VFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLA 598

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G SSHP   +I   L +L +EMK+ GY P T + L + +E +KE  LCGHSEKLA+  G+
Sbjct: 599 GDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGL 658

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LN   G  ++V KNLR+C DCH + KF+S   +REI +RD+NRFH FK G CSC  +W
Sbjct: 659 LNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 242/545 (44%), Gaps = 84/545 (15%)

Query: 42  SHSSCTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKT 98
           SH  C+    S S +   + KT  +    I  F ++ +    + V        I  D++ 
Sbjct: 17  SHCLCSATKASLSQAHAHILKTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRV 76

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
             ++++ CA L +L+ GK++H     SG+ +D  VL S L+ M+V    LK+ R VF+K+
Sbjct: 77  LPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVL-SSLLHMYVQFDHLKDARNVFDKL 135

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
               V   + L+  +++ G  KE+  LF + + LG+                        
Sbjct: 136 PQPGVVTSSALISRFARKGRVKETKELFYQTRDLGV------------------------ 171

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
                     + ++VSWN MISG+  +G     + +F+ M   G   D  ++ +VL    
Sbjct: 172 ----------ELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVG 221

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC----------------------- 315
           +    + G  +H + +K     +    + L+DMY KC                       
Sbjct: 222 DLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNA 281

Query: 316 --------GDLDGAIRVFEKMG--ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
                   G +D A+ VF++    + +VVSWTSMIA  ++ G    A+ LFR M  EG++
Sbjct: 282 LVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVK 341

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P+   I  +L AC     L  GK  H +   N + + +YV +AL+DMYAKCG M  +   
Sbjct: 342 PNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLC 401

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAAL 474
           F+ MP +++VSWN+++           A+++F  M +   +PD V+  C+L AC      
Sbjct: 402 FDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLT 461

Query: 475 ERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIA 532
           E G      + R HG+ A     + +V +  + G L  A ++   +P   D   W  +++
Sbjct: 462 EEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLS 521

Query: 533 GYGMH 537
              +H
Sbjct: 522 SCRVH 526


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 268/787 (34%), Positives = 429/787 (54%), Gaps = 45/787 (5%)

Query: 85  VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT 144
           ++  +   K+   T  S++   +    L    + H+    +G   D   L +KL      
Sbjct: 1   MILGNSSGKLSRNTLFSLINKASTFPHL---AQTHAQFILNGYRFDLATL-TKLTQKLFD 56

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSC 203
               +  R +F  +    +F++N+L+  +S   +   S+ L+  ++ +  ++ D++T++ 
Sbjct: 57  FSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAF 116

Query: 204 VLKCLA---------------------VVGNS--------RRVKDAHKLFDELSDRDVVS 234
            +   +                      VG++         RV  A K+FD + +RD V 
Sbjct: 117 AVAACSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVL 176

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           WN MI+G + N   +  +++F+EM+  G  VD +T+  VL   A    L  G  +   AL
Sbjct: 177 WNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLAL 236

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           K  F         L+ +YSKCGD++ A  +F ++    ++++ +MI+G+   G  + +++
Sbjct: 237 KIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVK 296

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LFR ++  G       I  ++   +  G L +   +H +  ++ +  +  VS A   +Y 
Sbjct: 297 LFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYN 356

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMAC 463
           K   +  A  +F++ P K +V+WN MI           A+ LF  M++  F P+ VT+  
Sbjct: 357 KLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITT 416

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           IL ACA L +L  G+ +H  I    +  +  V+ A+VDMY KCG +  A  LFD +  K+
Sbjct: 417 ILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKN 476

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
            ++W  MI GYG+HG+G +A+  +N+M   G  P  V+F+SVLYACSH+GLV EG   F+
Sbjct: 477 TVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFH 536

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
            M  +  IEP +EHYACMVD+L R+G L +A  FI+ MPV P   +WG+LL  C IH + 
Sbjct: 537 NMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDT 596

Query: 644 KLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
            +A   +E +FEL+P + GYYVLL+N+Y+    + +   +R+ + +R L K+PGC+ IE+
Sbjct: 597 DIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEV 656

Query: 704 KGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHS 763
            G  ++FV+G  SH HA  I + L++L  +M+  GY  +T  AL + +E EKE+A+  HS
Sbjct: 657 NGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHS 716

Query: 764 EKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGR 823
           EKLA+AFG++    G  IR+ KNLRVC DCH   KF+SK   R IV+RD+NRFHHFKDG 
Sbjct: 717 EKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGI 776

Query: 824 CSCRGFW 830
           CSC  +W
Sbjct: 777 CSCGDYW 783


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 280/814 (34%), Positives = 420/814 (51%), Gaps = 120/814 (14%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF---VTCGDLKEGRRVF 155
           +  +LQL     +   G+ +H+   ++G+++   +  + L +     V  G   E RR+F
Sbjct: 28  FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87

Query: 156 NKIDNGK--VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           + I   +   F WN L+  Y+K+G                                    
Sbjct: 88  DDIPYARRNAFTWNSLLSMYAKSG------------------------------------ 111

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
             R+ DA  +F ++ +RD VSW  M+ G    G     ++ F +M+  G       +  V
Sbjct: 112 --RLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNV 169

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD---------------- 317
           LS CA   A   GR VH+F +K   S  +   N++L MY KCGD                
Sbjct: 170 LSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSE 229

Query: 318 ---------------LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF-RGMVR 361
                          +D A+ +FE M ERS+VSW ++IAGY + G+ D A++ F R +  
Sbjct: 230 SSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTA 289

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM-- 419
             +EPD + +TS+L ACA   +L++GK +H YI    M  S  + NAL+  YAK GS+  
Sbjct: 290 SSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVET 349

Query: 420 ----------AD---------------------AESVFNQMPVKDIVSWNTMI------- 441
                     AD                     A  VF+ M  +D+++W  MI       
Sbjct: 350 ARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNG 409

Query: 442 ---GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
               A++LF +M+++  EP+  T+A +L ACASLA L  G++IH   +R       +V+N
Sbjct: 410 QNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSN 469

Query: 498 AIVDMYVKCGVLVLARSLFDMI-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           AI+ +Y + G + LAR +FD I   K+ ++WT MI     HG G  AI  F +M + G++
Sbjct: 470 AIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVK 529

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           PD V++I V  AC+H+G +D+G R++  M  E  I P++ HYACMVDLL+R G L+EA+ 
Sbjct: 530 PDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHE 589

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
           FI+ MPVAPD  +WGSLL  CR+     LAE  AE +  ++PDN+G Y  LANVY+   +
Sbjct: 590 FIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGR 649

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           W +  ++ +    + +KK  G SW  ++ KV++F A    HP    I      +  E+K+
Sbjct: 650 WNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKK 709

Query: 737 EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
            G+ P     L + D+  KE  L  HSEKLA+AFG+++ P   T+R+ KNLRVC DCH  
Sbjct: 710 AGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTA 769

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KF+SK   REI++RD+ RFHHF+DG CSC+ +W
Sbjct: 770 IKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 148/348 (42%), Gaps = 70/348 (20%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++NA I  + + G  + A++    + ++   + D  T  S+L  CA+L+ L+ GK++HS 
Sbjct: 262 SWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSY 321

Query: 122 ICESGI-------------------------VIDDGVLG-------SKLVFMFVTCGDLK 149
           I  +G+                         ++D  V+        + L+  +V  GD K
Sbjct: 322 ILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTK 381

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
           + R VF+ ++N  V  W  ++  Y + G   E++ LF+ M   G   +S+T + VL   A
Sbjct: 382 QAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACA 441

Query: 210 --------------------------------VVGNSRRVKDAHKLFDELSDR-DVVSWN 236
                                           V   S  V  A ++FD++  R + V+W 
Sbjct: 442 SLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWT 501

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL-K 295
            MI     +G+ E+ + +F+EML +G   D  T + V S C + G +  G+  +   L +
Sbjct: 502 SMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNE 561

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 342
                E+S    ++D+ ++ G L  A    ++M      V W S++A 
Sbjct: 562 HGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 609


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/710 (37%), Positives = 398/710 (56%), Gaps = 39/710 (5%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG-NFKESLYLFKKMQSLGI 194
           S   F  + CG L         + N K     L +H +  TG   + + YL  K+ +   
Sbjct: 16  STSTFDSLQCGTL------LQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAA--- 66

Query: 195 AADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                       C AV G+   +  A  +FD++  ++   WN MI GY  N    + L +
Sbjct: 67  ------------CYAVCGH---MPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFL 111

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
           + +ML+ G   D  T   VL  C +      GR VHA  +     +++   N++L MY K
Sbjct: 112 YLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFK 171

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
            GD++ A  VF++M  R + SW +M++G+ + G   GA  +F  M R+G   D   + ++
Sbjct: 172 FGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLAL 231

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSL---YVSNALMDMYAKCGSMADAESVFNQMPV 431
           L AC     L++GK++H Y+  N     +   ++ N+++DMY  C S++ A  +F  + V
Sbjct: 232 LSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRV 291

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           KD+VSWN++I           AL+LF  M+     PD VT+  +L AC  ++AL  G  +
Sbjct: 292 KDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATV 351

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
             Y+++ G   +  V  A++ MY  CG LV A  +FD +P K+L + T+M+ G+G+HG G
Sbjct: 352 QSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRG 411

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
            +AI+ F +M   G+ PDE  F +VL ACSHSGLVDEG   F  M  + ++EP+  HY+C
Sbjct: 412 REAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSC 471

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           +VDLL R G L EAY  IE M + P+  +W +LL  CR+H  VKLA   A+ +FEL PD 
Sbjct: 472 LVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDG 531

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
              YV L+N+YA   +WE+V+ +R  +++R L+K P  S++E+   V+ F  G +SH  +
Sbjct: 532 VSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQS 591

Query: 721 KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
             I + LK L  ++K+ GY P T   L + +E  KE  L  HSE+LA+AF ++N   G T
Sbjct: 592 DDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTT 651

Query: 781 IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           IR+TKNLRVCGDCH + K +SK   REI++RD  RFHHF+DG CSC G+W
Sbjct: 652 IRITKNLRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 235/499 (47%), Gaps = 52/499 (10%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           S  S  D+    ++LQ   + KSL    ++H+ +   G +  +  L +KL   +  CG +
Sbjct: 15  SSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHM 74

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-- 206
              + +F++I     F+WN ++  Y+   +   +L+L+ KM   G   D++T+  VLK  
Sbjct: 75  PYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKAC 134

Query: 207 -------------CLAVVGNSRR-----------------VKDAHKLFDELSDRDVVSWN 236
                         L VVG                     V+ A  +FD +  RD+ SWN
Sbjct: 135 GDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWN 194

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            M+SG++ NG A    EVF +M   GF  D  T++ +LS C +   L  G+ +H + ++ 
Sbjct: 195 TMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRN 254

Query: 297 CFSKEIS---FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
             S  +      N+++DMY  C  +  A ++FE +  + VVSW S+I+GY + G    A+
Sbjct: 255 GESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQAL 314

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
            LF  MV  G  PD   + S+L AC     L +G  V  Y+ +     ++ V  AL+ MY
Sbjct: 315 ELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMY 374

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMA 462
           A CGS+  A  VF++MP K++ +   M+           A+ +F  ML +   PD     
Sbjct: 375 ANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFT 434

Query: 463 CILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFD---M 518
            +L AC+    ++ G+EI   + R + +       + +VD+  + G L  A ++ +   +
Sbjct: 435 AVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKL 494

Query: 519 IPAKDLISWTIMIAGYGMH 537
            P +D+  WT +++   +H
Sbjct: 495 KPNEDV--WTALLSACRLH 511


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 280/759 (36%), Positives = 416/759 (54%), Gaps = 65/759 (8%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +  +T+ ++L+ C   + L  GK +H++  +S ++     L +    ++  CG L   + 
Sbjct: 7   LQLQTFRNLLKACIAQRDLITGKTLHALYFKS-LIPPSTYLSNHFTLLYSKCGSLHNAQT 65

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
            F+      VF +N L++ Y+K               SL                     
Sbjct: 66  SFDLTQYPNVFSYNTLINAYAK--------------HSL--------------------- 90

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
              +  A ++FDE+   D+VS+N +I+ Y   G     L +F E+  L F +D  T+  V
Sbjct: 91  ---IHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGV 147

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE--- 330
           +  C +   L+  R +H F +   +    S NN +L  YS+ G L+ A RVF +MGE   
Sbjct: 148 IIACGDDVGLV--RQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGG 205

Query: 331 RSVVSWTSMIA--GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
           R  VSW +MI   G  REG+   A+ LFR MVR G++ D++ + S+L A  C   L  G 
Sbjct: 206 RDEVSWNAMIVACGQHREGL--EAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGM 263

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKC-GSMADAESVFNQMPVKDIVSWNTMIGAL--- 444
             H  + ++    + +V + L+D+Y+KC G M +   VF ++   D+V WNTMI      
Sbjct: 264 QFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQY 323

Query: 445 -DL-------FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADR-N 494
            DL       F  M  N F PD  +  C+  AC++L++   G+++H   ++  I  +R +
Sbjct: 324 EDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVS 383

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V NA+V MY KCG +  AR +FD +P  +++S   MIAGY  HG   +++  F  M Q  
Sbjct: 384 VNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKD 443

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           I P+ ++FI+VL AC H+G V+EG ++FNMM+    IEP+ EHY+CM+DLL R G L EA
Sbjct: 444 IAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEA 503

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
            R IE MP  P +  W +LL  CR H  V+LA K A    +LEP N   YV+L+N+YA A
Sbjct: 504 ERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASA 563

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +WEE   ++  +  RG+KK PGCSWIEI  KV++FVA  +SHP  K+I   +  +  +M
Sbjct: 564 ARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKM 623

Query: 735 KREGYFPKTRYALINADEM---EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
           K+ GY P  R+AL+  +E+   EKE  L  HSEKLA+AFG+++      I V KNLR+CG
Sbjct: 624 KQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICG 683

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   K +S    REI +RD++RFH FK+G CSC  +W
Sbjct: 684 DCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 127/529 (24%), Positives = 226/529 (42%), Gaps = 95/529 (17%)

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
           F + L T   +L  C     L+ G+ +HA   K+        +N    +YSKCG L  A 
Sbjct: 5   FPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQ 64

Query: 323 -------------------------------RVFEKMGERSVVSWTSMIAGYAREGVFDG 351
                                          +VF+++ +  +VS+ ++IA YA  G    
Sbjct: 65  TSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRP 124

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACD-GLLEIGKDVHDYIKENDMQSSLYVSNALM 410
           A+RLF  +       D + ++ ++ AC  D GL+   + +H ++          V+NA++
Sbjct: 125 ALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLV---RQLHCFVVVCGYDCYASVNNAVL 181

Query: 411 DMYAKCGSMADAESVFNQMPV---KDIVSWNTMI----------GALDLFVAMLQN-FEP 456
             Y++ G + +A  VF +M     +D VSWN MI           A++LF  M++   + 
Sbjct: 182 ACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKV 241

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC-GVLVLARSL 515
           D  TMA +L A   +  L  G + HG +++ G   + +V + ++D+Y KC G +V  R +
Sbjct: 242 DMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKV 301

Query: 516 FDMIPAKDLISWTIMIAGYGMH-GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           F+ I A DL+ W  MI+G+  +     D I  F +M+  G  PD+ SF+ V  ACS+   
Sbjct: 302 FEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSS 361

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP------------ 622
              G +   +         ++     +V + S+ GN+ +A R  + MP            
Sbjct: 362 PSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIA 421

Query: 623 ----------------------VAPDATIWGSLLCGCRIHHEVKLAEK---VAEHVFELE 657
                                 +AP+   + ++L  C    +V+  +K   + +  F +E
Sbjct: 422 GYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIE 481

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC-SWIEIKG 705
           P+   +Y  + ++   A K +E +++ E      +  NPG   W  + G
Sbjct: 482 PE-AEHYSCMIDLLGRAGKLKEAERIIET-----MPFNPGSIEWATLLG 524



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 40/300 (13%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC-GDLKEG 151
           K+D  T  S+L     +K L  G + H ++ +SG   +  V GS L+ ++  C G + E 
Sbjct: 240 KVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHV-GSGLIDLYSKCAGGMVEC 298

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKES-LYLFKKMQSLGIAADSYTFSCVLKC--- 207
           R+VF +I    + +WN ++  +S+  +  E  ++ F++MQ  G   D  +F CV      
Sbjct: 299 RKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSN 358

Query: 208 ------------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNC 237
                                         +A+      V DA ++FD + + ++VS N 
Sbjct: 359 LSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNS 418

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MI+GY  +GV  + L +F+ ML      +  T + VLS C + G +  G+      +K  
Sbjct: 419 MIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNM-MKER 477

Query: 298 F--SKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIR 354
           F    E    + ++D+  + G L  A R+ E M      + W +++    + G  + A++
Sbjct: 478 FRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVK 537


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 272/782 (34%), Positives = 428/782 (54%), Gaps = 50/782 (6%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D  T    L++C  L     G++VH    +SG  ++D  +G+ LV M++   D ++GR 
Sbjct: 102 VDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGF-LEDVSVGTSLVDMYMKTEDFEDGRG 160

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA---- 209
           +F+++    V  W  L+  Y++ G   E ++L  +MQ  G+  + +TF+ VL  LA    
Sbjct: 161 IFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESI 220

Query: 210 ----------VVGN------------------SRRVKDAHKLFDELSDRDVVSWNCMISG 241
                     +V N                  S  V DA  +FD +  RD V+WN MI G
Sbjct: 221 IEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGG 280

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y A G   +G ++F  M   G  +      T L  C+    L F + +H   +K  +   
Sbjct: 281 YAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFA 340

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                 L+  YSKC  +D A ++F       +VV+WT+MI G+ +      A+ LF  M 
Sbjct: 341 QDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMS 400

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           REG+ P+ +  +++L A     LL     +H  I +   +    V+ AL+D Y K G++ 
Sbjct: 401 REGVRPNHFTYSTVL-AGKPSSLL---SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVV 456

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACA 469
           ++  VF  +P KDIV+W+ M+           A+++F+ ++ +  +P+  T + ++ AC+
Sbjct: 457 ESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACS 516

Query: 470 SLAA-LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           S AA +E G++IH   ++ G S    V++A++ MY K G +  A  +F     +D++SW 
Sbjct: 517 SSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWN 576

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI GYG HG    A+  F  M+  G+  D+V+FI VL AC+H+GLV+EG ++FN+M  +
Sbjct: 577 SMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKD 636

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
            +I+ K EHY+CMVDL SR G   +A   I  MP     TIW +LL  CR+H  ++L + 
Sbjct: 637 YHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKL 696

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            AE +  L+P++   YVLL+N++A A  WEE   +R+ +  R +KK  GCSWIEIK ++ 
Sbjct: 697 AAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIF 756

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            F+AG  SHP +  + + L+ L +++K  GY P T Y   + +E  KE  L  HSE+LA+
Sbjct: 757 SFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAI 816

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           A+G++ LP G  I++ KNLR+CGDCH + + +S    R +++RDSNRFHHFK G CSC G
Sbjct: 817 AYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGG 876

Query: 829 FW 830
           +W
Sbjct: 877 YW 878



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 255/511 (49%), Gaps = 29/511 (5%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           + L  +    R + AH+LFDE   +D+  +N ++  +  N    + L +FK++ + G  V
Sbjct: 43  QSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGV 102

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T+   L  C      + GR VH  +LK+ F +++S   +L+DMY K  D +    +F
Sbjct: 103 DGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIF 162

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++MG ++VVSWTS+++GYAR G+ D  I L   M  EG+ P+ +   ++L A A + ++E
Sbjct: 163 DEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIE 222

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
            G  VH  I +N  + + +V NAL+ MY K   + DAE+VF+ M V+D V+WN MIG   
Sbjct: 223 GGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYA 282

Query: 443 ALDLFVAMLQNFEP---DGVTMA-----CILPACASLAALERGREIHGYILRHGISADRN 494
           A+  ++   Q F      GV ++       L  C+    L   +++H  ++++G    ++
Sbjct: 283 AIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD 342

Query: 495 VANAIVDMYVKCGVLVLARSLFDMI-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
           +  A++  Y KC  +  A  LF M   A ++++WT MI G+  +     A+  F  M + 
Sbjct: 343 IRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSRE 402

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA-CMVDLLSRTGNLS 612
           G+ P+  ++ +VL A   S L+ +         YE     K+   A  ++D   +TGN+ 
Sbjct: 403 GVRPNHFTYSTVL-AGKPSSLLSQLHAQIIKAYYE-----KVPSVATALLDAYVKTGNVV 456

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL-----EPDNTGYYVLL 667
           E+ R    +P A D   W ++L G     + + +EK  E   +L     +P+   +  ++
Sbjct: 457 ESARVFYSIP-AKDIVAWSAMLTGLA---QTRDSEKAMEVFIQLVKEGVKPNEYTFSSVI 512

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
               + A   E  K++     + G K N  C
Sbjct: 513 NACSSSAATVEHGKQIHATAVKSG-KSNALC 542



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 144/545 (26%), Positives = 245/545 (44%), Gaps = 49/545 (8%)

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           +   ++F++     +  +N L+ ++S+  + +E+L+LFK + S G+  D  T SC LK  
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 209 AV------------------------VGNS--------RRVKDAHKLFDELSDRDVVSWN 236
            V                        VG S           +D   +FDE+  ++VVSW 
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            ++SGY  NG+ ++ + +  +M   G N +  T  TVL   A+   +  G  VHA  +K 
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            F       N L+ MY K   +  A  VF+ M  R  V+W  MI GYA  G +    ++F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M   G++       + L  C+    L   K +H  + +N  + +  +  ALM  Y+KC
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKC 354

Query: 417 GSMADAESVFNQM-PVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACI 464
            S+ +A  +F+      ++V+W  MIG          A+DLF  M  +   P+  T + +
Sbjct: 355 SSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTV 414

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           L    S        ++H  I++       +VA A++D YVK G +V +  +F  IPAKD+
Sbjct: 415 LAGKPSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDI 470

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           ++W+ M+ G         A+  F  + + G++P+E +F SV+ ACS S    E  +  + 
Sbjct: 471 VAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVK 644
              +      L   + ++ + S+ GN+  A +         D   W S++ G   H + K
Sbjct: 531 TAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQHGDAK 589

Query: 645 LAEKV 649
            A +V
Sbjct: 590 KALEV 594



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 201/425 (47%), Gaps = 35/425 (8%)

Query: 53  ASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLK 110
           A     +V  +  +N  IG +  +G   +  ++ +    +  K+    +C+ L+LC+  +
Sbjct: 261 AVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQR 320

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG-KVFIWNLL 169
            L   K++H  + ++G      +  + L+  +  C  + E  ++F+  D    V  W  +
Sbjct: 321 ELNFTKQLHCGVVKNGYEFAQDIR-TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAM 379

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------------------------ 205
           +  + +  N K+++ LF +M   G+  + +T+S VL                        
Sbjct: 380 IGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVP 439

Query: 206 ----KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                 L     +  V ++ ++F  +  +D+V+W+ M++G      +EK +EVF +++  
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499

Query: 262 GFNVDLATMVTVLSGCANCGALM-FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
           G   +  T  +V++ C++  A +  G+ +HA A+K+  S  +  ++ LL MYSK G+++ 
Sbjct: 500 GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIES 559

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A +VF +  ER +VSW SMI GY + G    A+ +F+ M  +G+  D      +L AC  
Sbjct: 560 AEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTH 619

Query: 381 DGLLEIGKDVHD-YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WN 438
            GL+E G+   +  IK+  +       + ++D+Y++ G    A  + N MP     + W 
Sbjct: 620 AGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWR 679

Query: 439 TMIGA 443
           T++ A
Sbjct: 680 TLLAA 684


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 275/784 (35%), Positives = 432/784 (55%), Gaps = 51/784 (6%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           ++D   + S+L++ A L     G+++H    + G  +DD  +G+ LV  ++   + K+GR
Sbjct: 94  EMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGF-LDDVSVGTSLVDTYMKGSNFKDGR 152

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            VF+++    V  W  L+  Y++    +E L LF +MQ  G   +S+TF+  L  LA  G
Sbjct: 153 NVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEG 212

Query: 213 NSRR--------------------------------VKDAHKLFDELSDRDVVSWNCMIS 240
              R                                V+ A  LFD+   + VV+WN MIS
Sbjct: 213 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 272

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY ANG+  + L +F  M      +  ++  +++  CAN   L F   +H   +K  F  
Sbjct: 273 GYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVF 332

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
           + +    L+  YSKC  +  A+R+F++ G   +VVSWT+MI+G+ +    + A+ LF  M
Sbjct: 333 DQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEM 392

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
            R+G+ P+ +  + IL A       E    VH  + + + + S  V  AL+D Y K G +
Sbjct: 393 KRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKV 448

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPAC 468
            +A  VF+ +  KDIV+W+ M+           A+ +F  + +   +P+  T + IL  C
Sbjct: 449 DEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVC 508

Query: 469 A-SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           A + A++ +G++ HG+ ++  + +   V++A++ MY K G +  A  +F     KDL+SW
Sbjct: 509 AATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSW 568

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
             MI+GY  HG    A+  F +M++  ++ D V+FI V  AC+H+GLV+EG ++F++M  
Sbjct: 569 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVR 628

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
           +C I P  EH +CMVDL SR G L +A + I+ MP    +TIW ++L  CR+H + +L  
Sbjct: 629 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGR 688

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
             AE +  + P+++  YVLL+N+YAE+  W+E  K+R+ ++ R +KK PG SWIE+K K 
Sbjct: 689 LAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKT 748

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
             F+AG  SHP   +I   L+ L   +K  GY P T Y L + D+  KE  L  HSE+LA
Sbjct: 749 YAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLA 808

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF-KDGRCSC 826
           +AFG++  P G  + + KNLRVCGDCH + K ++K   REIV+RDSNRFHHF  DG CSC
Sbjct: 809 IAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSC 868

Query: 827 RGFW 830
             FW
Sbjct: 869 GDFW 872



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 231/457 (50%), Gaps = 32/457 (7%)

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
            +S R+  AH LFD+  DRD  S+  ++ G+  +G  ++   +F  + +LG  +D +   
Sbjct: 42  ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +VL   A     +FGR +H   +K  F  ++S   +L+D Y K  +      VF++M ER
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER 161

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           +VV+WT++I+GYAR  + +  + LF  M  EG +P+ +   + L   A +G+   G  VH
Sbjct: 162 NVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 221

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
             + +N +  ++ VSN+L+++Y KCG++  A  +F++  VK +V+WN+MI          
Sbjct: 222 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 281

Query: 443 -ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            AL +F +M L +      + A I+  CA+L  L    ++H  ++++G   D+N+  A++
Sbjct: 282 EALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALM 341

Query: 501 DMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
             Y KC  ++ A  LF       +++SWT MI+G+  +    +A+  F++M++ G+ P+E
Sbjct: 342 VAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNE 401

Query: 560 VSFISVLYACS-------HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
            ++  +L A         H+ +V            + N E        ++D   + G + 
Sbjct: 402 FTYSVILTALPVISPSEVHAQVV------------KTNYERSSTVGTALLDAYVKLGKVD 449

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
           EA +    +    D   W ++L G     E + A K+
Sbjct: 450 EAAKVFSGID-NKDIVAWSAMLAGYAQAGETEAAIKI 485



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 242/492 (49%), Gaps = 55/492 (11%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDL 148
           E ++ ++ T+ + L + A+      G +VH+++ ++G+  D  + + + L+ +++ CG++
Sbjct: 192 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL--DKTIPVSNSLINLYLKCGNV 249

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           ++ R +F+K +   V  WN ++  Y+  G   E+L +F  M+   +     +F+ ++K  
Sbjct: 250 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLC 309

Query: 209 AVVGNSRRVK--------------------------------DAHKLFDELSDR-DVVSW 235
           A +   R  +                                DA +LF E     +VVSW
Sbjct: 310 ANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSW 369

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
             MISG++ N   E+ + +F EM   G   +  T   +L+       ++    VHA  +K
Sbjct: 370 TAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVK 425

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
             + +  +    LLD Y K G +D A +VF  +  + +V+W++M+AGYA+ G  + AI++
Sbjct: 426 TNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKI 485

Query: 356 FRGMVREGIEPDVYAITSILHACAC-DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           F  + + G++P+ +  +SIL+ CA     +  GK  H +  ++ + SSL VS+AL+ MYA
Sbjct: 486 FSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYA 545

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMAC 463
           K G +  AE VF +   KD+VSWN+MI           ALD+F  M +   + D VT   
Sbjct: 546 KKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIG 605

Query: 464 ILPACASLAALERGREIHGYILRH-GISADRNVANAIVDMYVKCGVLVLARSLFDMIP-- 520
           +  AC     +E G +    ++R   I+  +   + +VD+Y + G L  A  + D +P  
Sbjct: 606 VFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNL 665

Query: 521 AKDLISWTIMIA 532
           A   I  TI+ A
Sbjct: 666 AGSTIWRTILAA 677


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 243/561 (43%), Positives = 349/561 (62%), Gaps = 10/561 (1%)

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
           C  +   R VHA  +     +++   N LL  Y++   +D A  +F+ +  R   +W+ M
Sbjct: 13  CRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVM 72

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           + G+A+ G   G    FR ++R G+ PD Y +  ++  C     L+IG+ +HD + ++ +
Sbjct: 73  VGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGL 132

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA---------LDLFVAM 450
            S  +V  +L+DMYAKC  + DA+ +F +M  KD+V+W  MIGA         L LF  M
Sbjct: 133 LSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLVLFDRM 192

Query: 451 LQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
            +    PD V M  ++ ACA L A+ R R  + YI+R+G S D  +  A++DMY KCG +
Sbjct: 193 REEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSV 252

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             AR +FD +  K++ISW+ MIA YG HG G DAI  F+ M    I P+ V+F+S+LYAC
Sbjct: 253 ESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYAC 312

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           SH+GL++EG RFFN M  E  + P ++HY CMVDLL R G L EA R IE M V  D  +
Sbjct: 313 SHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERL 372

Query: 630 WGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISR 689
           W +LL  CRIH +++LAEK A  + EL+P N G+YVLL+N+YA+A KWE+V K R+ +++
Sbjct: 373 WSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQ 432

Query: 690 RGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALIN 749
           R LKK PG +WIE+  K   F  G  SHP +K+I  +L  L  +++  GY P T + L +
Sbjct: 433 RKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQD 492

Query: 750 ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIV 809
            +E  K+  L  HSEKLA+AFG++ +P G+ IR++KNLRVCGDCH  +K +S   RR I+
Sbjct: 493 VEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSII 552

Query: 810 LRDSNRFHHFKDGRCSCRGFW 830
           +RD+NRFHHF DG CSC  +W
Sbjct: 553 VRDANRFHHFNDGTCSCGDYW 573



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 171/345 (49%), Gaps = 14/345 (4%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K L      + + DA+ LFD L+ RD  +W+ M+ G+   G        F+E+L  G   
Sbjct: 40  KLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTP 99

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T+  V+  C +   L  GR +H   LK     +     +L+DMY+KC  ++ A R+F
Sbjct: 100 DNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLF 159

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           E+M  + +V+WT MI  YA    ++  + LF  M  EG+ PD  A+ ++++ACA  G + 
Sbjct: 160 ERMLSKDLVTWTVMIGAYADCNAYESLV-LFDRMREEGVVPDKVAMVTVVNACAKLGAMH 218

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
             +  +DYI  N     + +  A++DMYAKCGS+  A  VF++M  K+++SW+ MI    
Sbjct: 219 RARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYG 278

Query: 443 -------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADR 493
                  A+DLF  ML     P+ VT   +L AC+    +E G R  +     H +  D 
Sbjct: 279 YHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDV 338

Query: 494 NVANAIVDMYVKCGVLVLARSLFD-MIPAKDLISWTIMIAGYGMH 537
                +VD+  + G L  A  L + M   KD   W+ ++    +H
Sbjct: 339 KHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIH 383



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 180/362 (49%), Gaps = 36/362 (9%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           ++VH+ +  +G  + D V+ +KL++ +     + +   +F+ +       W++++  ++K
Sbjct: 20  RQVHAHVVANG-TLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAK 78

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLK----------------------------- 206
            G+       F+++   G+  D+YT   V++                             
Sbjct: 79  AGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFV 138

Query: 207 CLAVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
           C ++V    +   V+DA +LF+ +  +D+V+W  MI  Y A+  A + L +F  M   G 
Sbjct: 139 CASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAY-ADCNAYESLVLFDRMREEGV 197

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             D   MVTV++ CA  GA+   R  + + ++  FS ++     ++DMY+KCG ++ A  
Sbjct: 198 VPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESARE 257

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF++M E++V+SW++MIA Y   G    AI LF  M+   I P+     S+L+AC+  GL
Sbjct: 258 VFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGL 317

Query: 384 LEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMI 441
           +E G +  +   +E+ ++  +     ++D+  + G + +A  +   M V KD   W+ ++
Sbjct: 318 IEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377

Query: 442 GA 443
           GA
Sbjct: 378 GA 379



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/316 (21%), Positives = 143/316 (45%), Gaps = 38/316 (12%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
           +K ++  +G F + G+            +  +  D  T   +++ C D   L+ G+ +H 
Sbjct: 66  SKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHD 125

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           ++ + G++ D  V  S LV M+  C  +++ +R+F ++ +  +  W +++  Y+   N  
Sbjct: 126 VVLKHGLLSDHFVCAS-LVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADC-NAY 183

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------------------------ 216
           ESL LF +M+  G+  D      V+   A +G   R                        
Sbjct: 184 ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMI 243

Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   V+ A ++FD + +++V+SW+ MI+ Y  +G  +  +++F  ML+     +  
Sbjct: 244 DMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRV 303

Query: 269 TMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T V++L  C++ G +  G R  ++   +     ++     ++D+  + G LD A+R+ E 
Sbjct: 304 TFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEA 363

Query: 328 MG-ERSVVSWTSMIAG 342
           M  E+    W++++  
Sbjct: 364 MTVEKDERLWSALLGA 379


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 280/818 (34%), Positives = 428/818 (52%), Gaps = 37/818 (4%)

Query: 26  FASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEV 85
            +S  PS LPI +    HS    N   +   K    + K     I +   + NL +  ++
Sbjct: 8   LSSAPPSPLPISI----HSFQNTNQYHSPTLKFTQSQPKPNVPHIQQELHI-NLNETQQL 62

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
                   I T + CS     A L+S      +HS +  S I  +     +K ++ ++  
Sbjct: 63  ----HGHFIKTSSNCSYRVPLAALESYSSNAAIHSFLITSYIKNNCPADAAK-IYAYMRG 117

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
            D +    V   +      I + L+ +       K            G   D +  + ++
Sbjct: 118 TDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKN-----------GFHGDVFVCNALI 166

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
              + VG+   +  A  LFD++ ++DVVSW+ MI  Y  +G+ ++ L++ ++M  +    
Sbjct: 167 MMYSEVGS---LALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKP 223

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALK--ACFSKEISFNNTLLDMYSKCGDLDGAIR 323
               M+++    A    L  G+A+HA+ ++   C    +     L+DMY KC +L  A R
Sbjct: 224 SEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARR 283

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF+ + + S++SWT+MIA Y      +  +RLF  M+ EG+ P+   + S++  C   G 
Sbjct: 284 VFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGA 343

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           LE+GK +H +   N    SL ++ A +DMY KCG +  A SVF+    KD++ W+ MI  
Sbjct: 344 LELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISS 403

Query: 443 ---------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    A D+FV M      P+  TM  +L  CA   +LE G+ IH YI + GI  D
Sbjct: 404 YAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGD 463

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             +  + VDMY  CG +  A  LF     +D+  W  MI+G+ MHG G  A+  F +M  
Sbjct: 464 MILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEA 523

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
            G+ P++++FI  L+ACSHSGL+ EG R F+ M +E    PK+EHY CMVDLL R G L 
Sbjct: 524 LGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLD 583

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           EA+  I+ MP+ P+  ++GS L  C++H  +KL E  A+    LEP  +GY VL++N+YA
Sbjct: 584 EAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYA 643

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
            A +W +V  +R  +   G+ K PG S IE+ G ++ F+ G   HP AKK+  ++  +R 
Sbjct: 644 SANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMRE 703

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
           +++  GY P     L N D+ +K  AL  HSEKLAMA+G+++   G  IR+ KNLRVC D
Sbjct: 704 KLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDD 763

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CH   K +SK   REI++RD NRFHHFK+G CSC  +W
Sbjct: 764 CHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/559 (43%), Positives = 353/559 (63%), Gaps = 17/559 (3%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VH   +   F ++      L++M+S+   +D A +VF+K  +R++  W ++    A  G 
Sbjct: 91  VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACD----GLLEIGKDVHDYIKENDMQSSLY 404
            +  + L+  M   G+  D +  T +L AC         L+ GK++H +I  +   + ++
Sbjct: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVH 210

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNF 454
           V   LMDMYA+ G ++ A +VF++MPVK++VSW+ MI           AL+LF  M+ N 
Sbjct: 211 VMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNT 270

Query: 455 E---PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
               P+ VTM  +L ACA+ AALE+G+ IH YILR G+ +   V +A++ MY +CG L  
Sbjct: 271 HDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLES 330

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
            + +FD +  KD++ W  +I+ YG+HG+G  AI  F +M   G  P  +SFISVL ACSH
Sbjct: 331 GQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSH 390

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           +GLV+EG + F  M  E  I+P +EHYACMVDLL R   L EA + IE + + P   +WG
Sbjct: 391 TGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWG 450

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           SLL  CRIH  V+LAE+ ++ +F+LEP N G YVLLA++YAEAE W+EVK++++ +  R 
Sbjct: 451 SLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRE 510

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
           L+K PG SWIE++ K+  F +    +P  +++ +LL  L  EMK+ GY P+T+  L + D
Sbjct: 511 LQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLD 570

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           + EKE  + GHSEKLA+AFG++N   G TIR+TKNLR+C DCH + KF+SK A REI++R
Sbjct: 571 QEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVR 630

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           D NRFHHFKDG CSC  +W
Sbjct: 631 DLNRFHHFKDGVCSCGDYW 649



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 231/460 (50%), Gaps = 54/460 (11%)

Query: 26  FASYKPSTLPIIVSSK-SHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAME 84
           ++++ P + P   +SK S SS + NP +   S        N N  I   C+ GNL++A+ 
Sbjct: 8   YSTHYPPSSPRYSTSKLSVSSFSFNPSTPPNS--------NNNHLIQSLCKQGNLKQALY 59

Query: 85  VLYSSEKSKIDTKTYCSILQLCADLK-SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFV 143
           +L S E +   T+  C +L L A  + SL D   VH ++ + G    D  L +KL+ MF 
Sbjct: 60  LL-SHESNP--TQQTCELLILSAARRNSLSDALDVHQLLVDGGF-DQDPFLATKLINMFS 115

Query: 144 TCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
               +   R+VF+K     +++WN L    +  G   + L L+ +M  +G+++D +T++ 
Sbjct: 116 ELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTY 175

Query: 204 VLK-CLA---VVGNSRRVKDAHK--------------------------------LFDEL 227
           +LK C+A   +V   ++ K+ H                                 +FDE+
Sbjct: 176 LLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEM 235

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNV-DLATMVTVLSGCANCGALMF 285
             ++VVSW+ MI+ Y  NG   + LE+F+EM LN   +V +  TMV+VL  CA   AL  
Sbjct: 236 PVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQ 295

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ +HA+ L+      +   + L+ MY++CG L+    +F++M ++ VV W S+I+ Y  
Sbjct: 296 GKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGL 355

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD-YIKENDMQSSLY 404
            G    AI++F  M+  G  P   +  S+L AC+  GL+E GK + +  +KE+ +Q S+ 
Sbjct: 356 HGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVE 415

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
               ++D+  +   + +A  +   + ++     W +++GA
Sbjct: 416 HYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGA 455



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 184/375 (49%), Gaps = 21/375 (5%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G+LK+   + +   N       LL+   ++  +  ++L + + +   G   D +  +   
Sbjct: 52  GNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLAT--- 108

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K + +      V +A K+FD+   R +  WN +       G     LE++  M  +G + 
Sbjct: 109 KLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSS 168

Query: 266 DLATMVTVLSGC--ANC--GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           D  T   +L  C  + C    L  G+ +HA  L+  +   +    TL+DMY++ G +  A
Sbjct: 169 DRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYA 228

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVYAITSILHACA 379
             VF++M  ++VVSW++MIA YA+ G    A+ LFR M+    +  P+   + S+L ACA
Sbjct: 229 SAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACA 288

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               LE GK +H YI    + S L V +AL+ MYA+CG +   + +F++M  KD+V WN+
Sbjct: 289 AFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNS 348

Query: 440 MIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-H 487
           +I           A+ +F  M+ + F P  ++   +L AC+    +E G+++   +++ H
Sbjct: 349 LISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEH 408

Query: 488 GISADRNVANAIVDM 502
           GI         +VD+
Sbjct: 409 GIQPSVEHYACMVDL 423



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 35/184 (19%), Positives = 78/184 (42%), Gaps = 8/184 (4%)

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           P   T   ++ + A   +L    ++H  ++  G   D  +A  +++M+ +   +  AR +
Sbjct: 67  PTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKV 126

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS--- 572
           FD    + +  W  +     + G G D +  +  M   G+  D  ++  +L AC  S   
Sbjct: 127 FDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECL 186

Query: 573 -GLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
              + +G     +++R+       +     ++D+ +R G +S A    + MPV  +   W
Sbjct: 187 VSFLQKGKEIHAHILRHGYGAHVHV--MTTLMDMYARFGCVSYASAVFDEMPVK-NVVSW 243

Query: 631 GSLL 634
            +++
Sbjct: 244 SAMI 247


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 257/622 (41%), Positives = 362/622 (58%), Gaps = 49/622 (7%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A +LFDE+ +  V+ WN +I  Y  NG  +  ++++  ML+LG   +  T   VL  C+ 
Sbjct: 62  ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSG 121

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             A+  G  +H+ A       ++     L+D Y+KCG L  A R+F  M  R VV+W +M
Sbjct: 122 LLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAM 181

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           IAG +  G+ D A++L   M  EGI P+   I  +L  C C                   
Sbjct: 182 IAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQC------------------- 222

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
              LY                 A  +F+ M V++ VSW+ MIG          ALD+F  
Sbjct: 223 --LLY-----------------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRM 263

Query: 450 M-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M L   +PD  TM  +LPAC+ LAAL+ G   HGY++  G + D  + NA++DMY KCG 
Sbjct: 264 MQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGK 323

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +  AR +F+ +   D++SW  MI GYG+HG G +A+  F+D+   G++PD+++FI +L +
Sbjct: 324 ISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSS 383

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSHSGLV EG  +F+ M  + +I P++EH  CMVD+L R G + EA+ FI  MP  PD  
Sbjct: 384 CSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVR 443

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           IW +LL  CRIH  ++L E+V++ +  L P++TG +VLL+N+Y+ A +W++   +R    
Sbjct: 444 IWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQK 503

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
             GLKK PGCSWIEI G V+ FV G  SH    +I   L+ L +EMKR GY  +  +   
Sbjct: 504 DWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQ 563

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + +E EKE  L  HSEKLA+AFGILNL AG+ I VTKNLRVCGDCH   KFM+   +REI
Sbjct: 564 DVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREI 623

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
            +RD+NRFHHFK+G C+C  FW
Sbjct: 624 TVRDANRFHHFKNGTCNCGDFW 645



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 217/486 (44%), Gaps = 84/486 (17%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
             Y  +L+ C   KSL + KK+H    ++    D  VL  KL  ++++C  +   RR+F+
Sbjct: 9   NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVL-HKLTRLYLSCNQVVLARRLFD 67

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---------- 206
           +I N  V +WN ++  Y+  G F  ++ L+  M  LG+  + YT+  VLK          
Sbjct: 68  EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 207 -------------------CLAVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGYIA 244
                              C A+V    +   + +A +LF  +S RDVV+WN MI+G   
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G+ +  +++  +M   G   + +T+V VL     C  L++ R                 
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVL---PTCQCLLYAR----------------- 227

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
                             ++F+ MG R+ VSW++MI GY        A+ +FR M   GI
Sbjct: 228 ------------------KIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGI 269

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           +PD+  +  +L AC+    L+ G   H Y+      +   + NAL+DMY+KCG ++ A  
Sbjct: 270 DPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFARE 329

Query: 425 VFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAA 473
           VFN+M   DIVSWN MI           AL LF  +L    +PD +T  C+L +C+    
Sbjct: 330 VFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGL 389

Query: 474 LERGREIHGYILRH-GISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMI 531
           +  GR     + R   I         +VD+  + G++  A      +P   D+  W+ ++
Sbjct: 390 VMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALL 449

Query: 532 AGYGMH 537
           +   +H
Sbjct: 450 SACRIH 455



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 2/177 (1%)

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           +L AC    +L   ++IH + L++  +AD +V + +  +Y+ C  +VLAR LFD IP   
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           +I W  +I  Y  +G    AI  ++ M   G+ P++ ++  VL ACS    +++G    +
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
             +    +E  +     +VD  ++ G L EA R    M    D   W +++ GC ++
Sbjct: 134 HAKM-FGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGCSLY 188


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 235/624 (37%), Positives = 379/624 (60%), Gaps = 14/624 (2%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A ++FD+L    V  WN +I GY  N   +  L ++ +M     + D  T   +L  C  
Sbjct: 72  ARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGG 131

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE--KMGERSVVSWT 337
              L  GR VHA   +  F  ++   N L+ +Y+KC  L  A  VFE   + ER++VSWT
Sbjct: 132 LSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWT 191

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           ++++ YA+ G    A+ +F  M +  ++PD  A+ S+L+A  C   LE G+ +H  + + 
Sbjct: 192 AIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKM 251

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
            +++   +  +L  MYAKCG +A A+ +F++M   +++ WN MI           A+DLF
Sbjct: 252 GLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLF 311

Query: 448 VAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M+ ++  PD +++   + ACA + +LE+ R +  Y+ R     D  +++A++DM+ KC
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKC 371

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G +  ARS+FD    +D++ W+ MI GYG+HG   +AI+ +  M + G+ P++V+F+ +L
Sbjct: 372 GSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLL 431

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            AC+HSG+V EGW FFN M  +  I P+ +HYAC++DLL R G+L +AY  I+ MPV P 
Sbjct: 432 IACNHSGMVREGWWFFNRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPG 490

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
            T+WG+LL  C+ H  V+L +  A+ +F ++P NTG+YV L+N+YA A  W+ V ++R +
Sbjct: 491 VTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +  +GL K+ GCSW+E++G++  F  G  SHP  ++IE  ++ +   +K  G+      +
Sbjct: 551 MKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
           L + ++ E E  LC HSE++ +A+G+++ P G T+R+TKNLR C +CH   K +SK   R
Sbjct: 611 LHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGR 670

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           EIV+RD+NRFHHFKDG CSC  +W
Sbjct: 671 EIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 233/468 (49%), Gaps = 47/468 (10%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           +++H+ +   G+    G L +KL+    + GD+   R+VF+ +   +VF WN ++  YS+
Sbjct: 38  RQIHARLLVLGLQFS-GFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSR 96

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---------------------------- 207
             +F+++L ++ KMQ   ++ DS+TF  +LK                             
Sbjct: 97  NNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFV 156

Query: 208 ----LAVVGNSRRVKDAHKLFD--ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
               +A+    RR+  A  +F+   L +R +VSW  ++S Y  NG   + LE+F +M  +
Sbjct: 157 QNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKM 216

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               D   +V+VL+       L  GR++HA  +K     E     +L  MY+KCG +  A
Sbjct: 217 DVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATA 276

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F+KM   +++ W +MI+GYA+ G    AI LF  M+ + + PD  +ITS + ACA  
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQV 336

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
           G LE  + + +Y+  +D +  +++S+AL+DM+AKCGS+  A SVF++   +D+V W+ MI
Sbjct: 337 GSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMI 396

Query: 442 ----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      A+ L+ AM ++   P+ VT   +L AC     +  G      +  H I+
Sbjct: 397 VGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKIN 456

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
             +     I+D+  + G L  A  +   +P +  ++ W  +++    H
Sbjct: 457 PQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 187/373 (50%), Gaps = 15/373 (4%)

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           R +HA  L             L+   S  GD+  A +VF+ +    V  W ++I GY+R 
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
             F  A+ ++  M    + PD +    +L AC     L++G+ VH  +     ++ ++V 
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157

Query: 407 NALMDMYAKCGSMADAESVFNQMPV--KDIVSWNTMIG----------ALDLFVAMLQ-N 453
           N L+ +YAKC  +  A +VF  +P+  + IVSW  ++           AL++F  M + +
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
            +PD V +  +L A   L  LE+GR IH  +++ G+  + ++  ++  MY KCG +  A+
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAK 277

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
            LFD + + +LI W  MI+GY  +GF  DAI  F++M    + PD +S  S + AC+  G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVG 337

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
            +++  R+ +      +    +   + ++D+ ++ G++ E  R +    +  D  +W ++
Sbjct: 338 SLEQA-RWMDEYVSRSDYRDDVFISSALIDMFAKCGSV-ECARSVFDRTLDRDVVVWSAM 395

Query: 634 LCGCRIHHEVKLA 646
           + G  +H + + A
Sbjct: 396 IVGYGLHGQAREA 408



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 193/415 (46%), Gaps = 38/415 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  +    + + A+ +    + +++  D+ T+  +L+ C  L  L+ G+ VH+ + 
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVF 146

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN--KIDNGKVFIWNLLMHEYSKTGNFKE 181
             G   D  V  + L+ ++  C  L   R VF    +    +  W  ++  Y++ G   E
Sbjct: 147 RLGFEADVFV-QNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVE 205

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSR----------------------- 215
           +L +F +M+ + +  D      VL    CL  +   R                       
Sbjct: 206 ALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNT 265

Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                 +V  A  LFD++   +++ WN MISGY  NG A+  +++F EM+N     D  +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTIS 325

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           + + +S CA  G+L   R +  +  ++ +  ++  ++ L+DM++KCG ++ A  VF++  
Sbjct: 326 ITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTL 385

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           +R VV W++MI GY   G    AI L+R M R+G+ P+      +L AC   G++  G  
Sbjct: 386 DRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWW 445

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
             + + ++ +         ++D+  + G +  A  V   MPV+  V+ W  ++ A
Sbjct: 446 FFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 141/315 (44%), Gaps = 40/315 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC----SILQLCADLKSLEDGKKVHS 120
           ++ A +  + + G   +A+E+   S+  K+D K  C    S+L     L+ LE G+ +H+
Sbjct: 189 SWTAIVSAYAQNGEPVEALEIF--SQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHA 246

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            + + G+  +  +L S L  M+  CG +   + +F+K+ +  + +WN ++  Y+K G  K
Sbjct: 247 SVMKMGLETEPDLLIS-LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAK 305

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------------------------ 216
           +++ LF +M +  +  D+ + +  +   A VG+  +                        
Sbjct: 306 DAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALI 365

Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   V+ A  +FD   DRDVV W+ MI GY  +G A + + +++ M   G + +  
Sbjct: 366 DMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDV 425

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T + +L  C + G +  G            + +      ++D+  + G LD A  V + M
Sbjct: 426 TFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCM 485

Query: 329 G-ERSVVSWTSMIAG 342
             +  V  W ++++ 
Sbjct: 486 PVQPGVTVWGALLSA 500



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  + + G  + A+++ +   ++  + DT +  S +  CA + SLE  + +   + 
Sbjct: 291 WNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVS 350

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            S    DD  + S L+ MF  CG ++  R VF++  +  V +W+ ++  Y   G  +E++
Sbjct: 351 RSDYR-DDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAI 409

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDV----VSWNCMI 239
            L++ M+  G+  +  TF   L  L    +S  V++    F+ ++D  +      + C+I
Sbjct: 410 SLYRAMERDGVHPNDVTF---LGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACII 466

Query: 240 SGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
                 G  ++  EV K M +  G  V  A    +LS C     +  G+    +A +  F
Sbjct: 467 DLLGRAGHLDQAYEVIKCMPVQPGVTVWGA----LLSACKKHRHVELGK----YAAQQLF 518

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           S  I  +NT    Y +  +L  A R+++++ E  V
Sbjct: 519 S--IDPSNT--GHYVQLSNLYAAARLWDRVAEVRV 549



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 97/223 (43%), Gaps = 7/223 (3%)

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           R+IH  +L  G+     +   ++      G +  AR +FD +P   +  W  +I GY  +
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
               DA+  ++ M+ A + PD  +F  +L AC     +  G RF +   +    E  +  
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMG-RFVHAQVFRLGFEADVFV 156

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATI--WGSLLCGCRIHHEVKLAEKVAEHV-- 653
              ++ L ++   L  A    E +P+ P+ TI  W +++     + E   A ++   +  
Sbjct: 157 QNGLIALYAKCRRLGCARTVFEGLPL-PERTIVSWTAIVSAYAQNGEPVEALEIFSQMRK 215

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
            +++PD      +L N +   +  E+ + +   + + GL+  P
Sbjct: 216 MDVKPDCVALVSVL-NAFTCLQDLEQGRSIHASVMKMGLETEP 257


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 257/642 (40%), Positives = 371/642 (57%), Gaps = 49/642 (7%)

Query: 205 LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
           +K +    + + V  A K+FDE+ +R+V+  N MI  Y+ NG   +G++VF  M      
Sbjct: 78  VKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVR 137

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D  T   VL  C+  G ++ GR +H  A K   S  +   N L+ MY KCG L  A  V
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
            ++M  R VVSW S++ GYA+   FD A+ + R M    I  D   + S+L A       
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA------- 250

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
                V +   EN M    YV     DM+ K G              K +VSWN MIG  
Sbjct: 251 -----VSNTTTENVM----YVK----DMFFKMGK-------------KSLVSWNVMIGVY 284

Query: 443 --------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                   A++L+  M    FEPD V++  +LPAC   +AL  G++IHGYI R  +  + 
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            + NA++DMY KCG L  AR +F+ + ++D++SWT MI+ YG  G GCDA+A F+ ++ +
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G+ PD ++F++ L ACSH+GL++EG   F +M     I P+LEH ACMVDLL R G + E
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           AYRFI+ M + P+  +WG+LL  CR+H +  +    A+ +F+L P+ +GYYVLL+N+YA+
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
           A +WEEV  +R  +  +GLKKNPG S +E+   ++ F+ G  SHP + +I   L  L  +
Sbjct: 525 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKK 584

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP-----AGQTIRVTKNLR 788
           MK  GY P +  AL + +E +KE  L  HSEKLA+ F ++N       +  TIR+TKNLR
Sbjct: 585 MKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLR 644

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +CGDCH  AK +S+   REI++RD+NRFH F+ G CSC  +W
Sbjct: 645 ICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 189/430 (43%), Gaps = 80/430 (18%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
            +L    D+++L   + VHS I    +  +   LG KL+  + +  D+   R+VF++I  
Sbjct: 47  QVLDTYPDIRTL---RTVHSRIILEDLRCNSS-LGVKLMRAYASLKDVASARKVFDEIPE 102

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSRRV 217
             V I N+++  Y   G + E + +F  M    +  D YTF CVLK   C   +   R++
Sbjct: 103 RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162

Query: 218 -----------------------------KDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                                         +A  + DE+S RDVVSWN ++ GY  N   
Sbjct: 163 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF 222

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           +  LEV +EM ++  + D  TM ++L   +N                           T 
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSN-------------------------TTTE 257

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
             MY K         +F KMG++S+VSW  MI  Y +  +   A+ L+  M  +G EPD 
Sbjct: 258 NVMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDA 309

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
            +ITS+L AC     L +GK +H YI+   +  +L + NAL+DMYAKCG +  A  VF  
Sbjct: 310 VSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN 369

Query: 429 MPVKDIVSWNTMIGALDL------FVAMLQNFE-----PDGVTMACILPACASLAALERG 477
           M  +D+VSW  MI A          VA+    +     PD +     L AC+    LE G
Sbjct: 370 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429

Query: 478 REIHGYILRH 487
           R     +  H
Sbjct: 430 RSCFKLMTDH 439



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 182/355 (51%), Gaps = 8/355 (2%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T+  +L+ C+   ++  G+K+H    + G+      +G+ LV M+  CG L E R
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS-STLFVGNGLVSMYGKCGFLSEAR 195

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--V 210
            V +++    V  WN L+  Y++   F ++L + ++M+S+ I+ D+ T + +L  ++   
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
             N   VKD   +F ++  + +VSWN MI  Y+ N +  + +E++  M   GF  D  ++
Sbjct: 256 TENVMYVKD---MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +VL  C +  AL  G+ +H +  +      +   N L+DMY+KCG L+ A  VFE M  
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS 372

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R VVSWT+MI+ Y   G    A+ LF  +   G+ PD  A  + L AC+  GLLE G+  
Sbjct: 373 RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 432

Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
              + ++  +   L     ++D+  + G + +A      M ++ +   W  ++GA
Sbjct: 433 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 162/348 (46%), Gaps = 24/348 (6%)

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           R VH+  +        S    L+  Y+   D+  A +VF+++ ER+V+    MI  Y   
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G +   +++F  M    + PD Y    +L AC+C G + IG+ +H    +  + S+L+V 
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILP 466
           N L+ MY KCG +++A  V ++M  +D+VSWN+++      V   QN   D         
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLV------VGYAQNQRFDD-------- 224

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
                 ALE  RE+    + H      ++  A+ +   +  + V  + +F  +  K L+S
Sbjct: 225 ------ALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYV--KDMFFKMGKKSLVS 276

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           W +MI  Y  +    +A+  ++ M   G EPD VS  SVL AC  +  +  G +    + 
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
            +  + P L     ++D+ ++ G L +A    E M  + D   W +++
Sbjct: 337 RK-KLIPNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMI 382



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 5/151 (3%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  IG + +     +A+E LYS  ++   + D  +  S+L  C D  +L  GKK+H  
Sbjct: 276 SWNVMIGVYMKNAMPVEAVE-LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I E   +I + +L + L+ M+  CG L++ R VF  + +  V  W  ++  Y  +G   +
Sbjct: 335 I-ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD 393

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           ++ LF K+Q  G+  DS  F   L   +  G
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAG 424


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 281/791 (35%), Positives = 437/791 (55%), Gaps = 47/791 (5%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L +  +   D  T+  +++ C        G+ +H ++ + G+++D  V G+ L+ M+   
Sbjct: 21  LITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFV-GNALIAMYGKF 79

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS--LGIAADSYTFSC 203
           G +    +VF+ +    +  WN ++  +S+ G  K+   +  +M +   G+  D  T   
Sbjct: 80  GFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVT 139

Query: 204 VLKC---------------LAV-VGNSRRVK----------------DAHKLFDELSDRD 231
           VL                 LAV +G S  V+                +A  LFD+ + ++
Sbjct: 140 VLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKN 199

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
            VSWN MI G    G   +   +F+EM +     V+  T++ +L  C     L   + +H
Sbjct: 200 AVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELH 259

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
            ++++  F  +    N  +  Y+KCG L  A RVF  M  ++V SW ++I G A+ G   
Sbjct: 260 GYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPR 319

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A+ L+  M   G+ PD + I S+L A A    L  GK+VH ++  + ++   ++  +L+
Sbjct: 320 KALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLL 379

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGV 459
            +Y  CG  + A  +F+ M  K  VSWN MI           AL LF  ++ + F+P  +
Sbjct: 380 SLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDI 439

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
            +  +L AC+  +AL  G+E H Y L+  +  D  VA + +DMY K G +  +RS+FD +
Sbjct: 440 AVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGL 499

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
             KDL SW  +IA YG+HG G ++I  F  MR+ G  PD  +FI +L  CSH+GLV+EG 
Sbjct: 500 KNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGL 559

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
           ++FN M+    IEPKLEHYAC++D+L R G L +A R +  MP  PD+ +W SLL  CR 
Sbjct: 560 KYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRN 619

Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
             E+++ + VAE + ELEP N   YV L+N+YA + +W++V+++R+ I   GL+K+ GCS
Sbjct: 620 FGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCS 679

Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
           WIE+ GKV+ FVAG +  P +K++    ++L  +M + GY P T   L + DE +K   L
Sbjct: 680 WIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKL 739

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
            GHSEKLA+ FG+LN   G T+R+ KNLR+C DCH  +KFMS+   REI++RD+ RFHHF
Sbjct: 740 RGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHF 799

Query: 820 KDGRCSCRGFW 830
           KDG CSC  +W
Sbjct: 800 KDGLCSCGDYW 810



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 196/414 (47%), Gaps = 38/414 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  IG  C  G + +A  +   +   E  +++  T  +IL  C ++  L   K++H  
Sbjct: 202 SWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGY 261

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
               G   D+ ++ +  V  +  CG L    RVF  ++   V  WN L+   ++ G+ ++
Sbjct: 262 SIRHGFQYDE-LVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRK 320

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK------------------- 222
           +L L+ +M   G+  D +T   +L   A + + R  K+ H                    
Sbjct: 321 ALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLS 380

Query: 223 -------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                        LFD + ++  VSWN MISGY  NG+ E  L +F+++++ GF      
Sbjct: 381 LYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIA 440

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V+VL  C+   AL  G+  H +ALKA   +++    + +DMY+K G +  +  VF+ + 
Sbjct: 441 VVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLK 500

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            + + SW ++IA Y   G  + +I LF  M + G  PD +    IL  C+  GL+E G  
Sbjct: 501 NKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLK 560

Query: 390 VHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
             + ++  + ++  L     +MDM  + G + DA  + ++MP + D   W++++
Sbjct: 561 YFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLL 614



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 201/465 (43%), Gaps = 84/465 (18%)

Query: 42  SHSSCTINPISASISKTLVCKTKN-YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKT 98
           +++ C +   +  +  ++  KT N +NA IG   + G+  KA+ +      S +  D  T
Sbjct: 280 AYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFT 339

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
             S+L   A LKSL  GK+VH  +   G+ ID   +G  L+ +++ CG+    R +F+ +
Sbjct: 340 IGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDS-FIGISLLSLYIHCGESSSARLLFDGM 398

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-----IAADSYTFSCVLKCLAVVGN 213
           +      WN ++  YS+ G  +++L LF+K+ S G     IA  S   +C  +    +G 
Sbjct: 399 EEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGK 458

Query: 214 SRR---------------------------VKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                                         +K++  +FD L ++D+ SWN +I+ Y  +G
Sbjct: 459 ETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHG 518

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFN 305
             E+ +E+F+ M  +G   D  T + +L+ C++ G +  G +  +          ++   
Sbjct: 519 DGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHY 578

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
             ++DM  + G LD A+R+  +M E                                  +
Sbjct: 579 ACVMDMLGRAGRLDDALRLVHEMPE----------------------------------Q 604

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS-SLYVSNALMDMYAKCGSMADAES 424
           PD    +S+L  C   G LEIG+ V + + E + ++   YVS  L ++YA  G   D   
Sbjct: 605 PDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVS--LSNLYAGSGRWDDVRR 662

Query: 425 VFNQMPVKDI-------VSWNTMIGALDLFVAMLQNFEPDGVTMA 462
           V  QM +KDI        SW  + G +  FVA   N  P    M+
Sbjct: 663 V-RQM-IKDIGLQKDAGCSWIELGGKVHSFVAG-DNLLPQSKEMS 704



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 6/198 (3%)

Query: 443 ALDLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
           A+D+FV ++ +  F  D  T  C++ AC        G  IHG +++ G+  D  V NA++
Sbjct: 14  AIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALI 73

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR--QAGIEPD 558
            MY K G +  A  +F  +P ++L+SW  +I+G+  +GF  D      +M   + G+ PD
Sbjct: 74  AMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPD 133

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
             + ++VL  C+    V  G R   +   +  +   +     +VD+ S+ G L+EA    
Sbjct: 134 IATLVTVLPVCAREVDVQMGIRIHGLA-VKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLF 192

Query: 619 EMMPVAPDATIWGSLLCG 636
           +      +A  W +++ G
Sbjct: 193 DKNN-RKNAVSWNTMIGG 209


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 228/566 (40%), Positives = 360/566 (63%), Gaps = 12/566 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++++ CA   +L   RA+HA    + F+  +  +N+L+ +Y KCG +  A RVF+ M  R
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            + SWTS+IAGYA+  + D A+ L  GM+R   +P+ +   S+L A        IG+ +H
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------- 443
               + D    +YV +AL+DMYA+CG M  A +VF+Q+  K+ VSWN +I          
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 444 --LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             L +F  M +N FE    T + +  A A + ALE+G+ +H ++++ G      V N I+
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY K G ++ AR +FD +  KD+++W  M+  +  +G G +A+  F +MR+ G+  +++
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+S+L ACSH GLV EG ++F+MM+ E N+EP+++HY  +VDLL R G L++A  FI  
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ P A +WG+LL  CR+H   K+ +  A+HVFEL+PD+TG  VLL N+YA   +W+  
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            ++R+ +   G+KK P CSW+EI+  V++FVA   +HP +++I    + + +++++ GY 
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYV 547

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T Y L++ DE E++  L  HSEK+A+AF ++N+P G TIR+ KN+R+CGDCH   +++
Sbjct: 548 PNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYI 607

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSC 826
           SK  +REIV+RD+NRFHHF  G CSC
Sbjct: 608 SKVFKREIVVRDTNRFHHFSSGSCSC 633



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 224/503 (44%), Gaps = 85/503 (16%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + Y S++  CA  +SL+D + +H+ +            GS+                   
Sbjct: 65  RLYHSLITACARYRSLDDARAIHAHLA-----------GSQFA----------------- 96

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
               G VF+ N L+H Y K G                                       
Sbjct: 97  ----GSVFLDNSLIHLYCKCGA-------------------------------------- 114

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V DA ++FD +  RD+ SW  +I+GY  N + ++ L +   ML   F  +  T  ++L  
Sbjct: 115 VADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKA 174

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
                +   G  +HA  +K  +  ++   + LLDMY++CG +D AI VF+++  ++ VSW
Sbjct: 175 AGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSW 234

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++IAG+AR+G  +  + +F  M R G E   +  +S+  A A  G LE GK VH ++ +
Sbjct: 235 NALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIK 294

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQN 453
           +  + S +V N ++DMYAK GSM DA  VF+++  KD+V+WN+M+ A     L    + +
Sbjct: 295 SGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTH 354

Query: 454 FEP--------DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           FE         + +T   IL AC+    ++ G++    +  + +  + +    +VD+  +
Sbjct: 355 FEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGR 414

Query: 506 CGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
            G+L  A      +P K   + W  ++    MH      I  F       ++PD+     
Sbjct: 415 AGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNA--KIGQFAADHVFELDPDDTGPPV 472

Query: 565 VLYAC-SHSGLVDEGWRFFNMMR 586
           +LY   + +G  D   R   MM+
Sbjct: 473 LLYNIYASTGQWDAAARVRKMMK 495


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/676 (38%), Positives = 395/676 (58%), Gaps = 47/676 (6%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +DT    S+L+ C D K L+ GK +H  I   G+  ++  L   L+ ++ +C   +  + 
Sbjct: 1   MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQ-NNITLCKSLINLYFSCHLFQSAKL 59

Query: 154 VFNKIDNG-KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKC---L 208
           VF  I+N   + +WN LM   +K   F E L +F ++     +  D++T+  VLK    L
Sbjct: 60  VFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGL 119

Query: 209 AVVGNSRRV-----------------------------KDAHKLFDELSDRDVVSWNCMI 239
             VG  + V                             +DA KLFDE+ +RDV SWN +I
Sbjct: 120 GRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVI 179

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           S Y  +G  EK LE+F+EM   GF  D  T+ TV+S CA    L  G+ +H   +++ F+
Sbjct: 180 SCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFA 239

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +   ++ L+DMY KCG L+ A  VFE++  ++VVSW SMIAGY+ +G     I LFR M
Sbjct: 240 LDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM 299

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             EGI P +  ++SIL AC+    L++GK +H YI  N +++ ++V+++L+D+Y KCG++
Sbjct: 300 DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 359

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPAC 468
             AE+VF  MP  ++VSWN MI           AL +F  M +   +PD +T   +LPAC
Sbjct: 360 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPAC 419

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           + LA LE+G+EIH +I+   +  +  V  A++DMY KCG +  A  +F+ +P +D +SWT
Sbjct: 420 SQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWT 479

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MIA YG HG   +A+  F  M+Q+  +PD+V+F+++L ACSH+GLVDEG  +FN M  E
Sbjct: 480 SMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAE 539

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP-VAPDATIWGSLLCGCRIHHEVKLAE 647
              +P +EHY+C++DLL R G L EAY  ++  P +  D  +  +L   C +H ++ L E
Sbjct: 540 YGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGE 599

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
           ++   + E +PD+   Y++L+N+YA  +KW+EV+K+R KI   GLKKNPGCSWIE+  ++
Sbjct: 600 QIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRI 659

Query: 708 NIFVAGGSSHPHAKKI 723
           + FV    SHP A  I
Sbjct: 660 HPFVVEDKSHPQADMI 675



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 246/472 (52%), Gaps = 45/472 (9%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  TY S+L+ C+ L  +  GK VH+ + +SG  +D  V+ S  V M+  C   ++  
Sbjct: 103 KPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSA-VGMYAKCNVFEDAI 161

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           ++F+++    V  WN ++  Y + G  +++L LF++M+  G   DS T + V+   A + 
Sbjct: 162 KLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLL 221

Query: 213 NSRRVKDAH--------------------------------KLFDELSDRDVVSWNCMIS 240
           +  R K+ H                                ++F+++  ++VVSWN MI+
Sbjct: 222 DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIA 281

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY   G ++  +E+F+ M   G    L T+ ++L  C+    L  G+ +H + ++     
Sbjct: 282 GYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEA 341

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           +I  N++L+D+Y KCG++  A  VF+ M + +VVSW  MI+GY + G +  A+ +F  M 
Sbjct: 342 DIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMR 401

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           + G++PD    TS+L AC+   +LE GK++H++I E+ ++ +  V  AL+DMYAKCG++ 
Sbjct: 402 KAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVD 461

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACA 469
           +A  +FNQ+P +D VSW +MI           AL LF  M Q + +PD VT   IL AC+
Sbjct: 462 EALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACS 521

Query: 470 SLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
               ++ G    +  I  +G        + ++D+  + G L  A  +    P
Sbjct: 522 HAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTP 573



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 3/150 (2%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  + +VG+  +A+ +     K+  K D  T+ S+L  C+ L  LE GK++H+ I
Sbjct: 376 SWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFI 435

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ES + I++ V+G+ L+ M+  CG + E   +FN++       W  ++  Y   G   E+
Sbjct: 436 IESKLEINEVVMGA-LLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEA 494

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           L LF+KMQ      D  TF  +L   +  G
Sbjct: 495 LKLFEKMQQSDAKPDKVTFLAILSACSHAG 524


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/622 (39%), Positives = 372/622 (59%), Gaps = 11/622 (1%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +F+ +   +  ++N MI G       +  L +FK+M       D  T  +VL  C+ 
Sbjct: 74  ALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSR 133

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             AL  G  VHA  LK+ F       NTL+ MY+ CG +  A  VF+ M ERS+V+W SM
Sbjct: 134 MKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSM 193

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           ++GY + G++D  ++LFR ++   IE D   + S+L AC     LEIG+ + +YI    +
Sbjct: 194 LSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGL 253

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
           + +  ++ +L+DMYAKCG +  A  +F++M  +D+V+W+ MI           AL+LF  
Sbjct: 254 RRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHE 313

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M + N  P+ VTM  +L +CA L A E G+ +H YI +  +     +   ++D Y KCG 
Sbjct: 314 MQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGY 373

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +  +  +F  +  K++ +WT +I G   +G G  A+  F+ M +  ++P++V+FI VL A
Sbjct: 374 IDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSA 433

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSH+ LVD+G   FN MR + +IEP++EHY CMVD+L R G L EAY+FI+ MP  P+A 
Sbjct: 434 CSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAV 493

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           +W +LL  CR H  +++AEK  EH+  LEP ++G Y+LL+N YA   + E+  ++R  I 
Sbjct: 494 VWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIK 553

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
            + +KK PGCS IE+ G V+ F +    H H+K+I   L ++  ++KR GY P T  A +
Sbjct: 554 EKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARL 613

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
            A+E  KE ++  HSEKLA+A+G++      TIR++KNLR+C DCH   KF+S+   R I
Sbjct: 614 EAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMI 673

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           ++RD NRFHHFKDG CSC  +W
Sbjct: 674 IVRDRNRFHHFKDGLCSCNDYW 695



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 239/485 (49%), Gaps = 55/485 (11%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVID----DGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           ILQ C   K+ +D ++VH+ + ++  ++D    + VL S  + +  T   +     +FN 
Sbjct: 27  ILQQC---KTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDT---IDYALSIFNH 80

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           ID  +   +N+++   +   +   +L LFKKM    +  D +TFS VLK  + +   R  
Sbjct: 81  IDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREG 140

Query: 218 KDAHKL--------------------------------FDELSDRDVVSWNCMISGYIAN 245
           +  H L                                FD + +R +V+WN M+SGY  N
Sbjct: 141 EQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKN 200

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
           G+ ++ +++F+++L L    D  TM++VL  C     L  G  +  + +     +  +  
Sbjct: 201 GLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLT 260

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
            +L+DMY+KCG +D A ++F++M +R VV+W++MI+GYA+      A+ LF  M +  + 
Sbjct: 261 TSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVY 320

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P+   + S+L++CA  G  E GK VH YIK+  M+ ++ +   L+D YAKCG +  +  V
Sbjct: 321 PNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEV 380

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAAL 474
           F +M  K++ +W  +I           AL+ F +ML+N  +P+ VT   +L AC+    +
Sbjct: 381 FKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLV 440

Query: 475 ERGREIHGYILRH-GISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIA 532
           ++GR +   + R   I         +VD+  + G L  A    D +P   + + W  ++A
Sbjct: 441 DQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLA 500

Query: 533 GYGMH 537
               H
Sbjct: 501 SCRAH 505



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 189/383 (49%), Gaps = 35/383 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+ S+L+ C+ +K+L +G++VH++I +SG   ++ V  + L+ M+  CG +   R V
Sbjct: 120 DKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENT-LIQMYANCGQIGVARHV 178

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+ +    +  WN ++  Y+K G + E + LF+K+  L I  D  T   VL     + N 
Sbjct: 179 FDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANL 238

Query: 215 R--------------------------------RVKDAHKLFDELSDRDVVSWNCMISGY 242
                                            +V  A KLFDE+  RDVV+W+ MISGY
Sbjct: 239 EIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGY 298

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
                 ++ L +F EM       +  TMV+VL  CA  GA   G+ VH +  K      +
Sbjct: 299 AQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTV 358

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
           +    L+D Y+KCG +D ++ VF++M  ++V +WT++I G A  G    A+  F  M+  
Sbjct: 359 TLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLEN 418

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMAD 421
            ++P+      +L AC+   L++ G+ + + ++ + D++  +     ++D+  + G + +
Sbjct: 419 DVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEE 478

Query: 422 AESVFNQMPV-KDIVSWNTMIGA 443
           A    + MP   + V W T++ +
Sbjct: 479 AYQFIDNMPFPPNAVVWRTLLAS 501



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 193/365 (52%), Gaps = 17/365 (4%)

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           +D A+ +F  + +    ++  MI G A +   D A+ LF+ M  + ++ D +  +S+L A
Sbjct: 71  IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           C+    L  G+ VH  I ++  +S+ +V N L+ MYA CG +  A  VF+ MP + IV+W
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190

Query: 438 NTMIGA----------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR 486
           N+M+            + LF  +L+   E D VTM  +L AC  LA LE G  I  YI+ 
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
            G+  +  +  +++DMY KCG +  AR LFD +  +D+++W+ MI+GY       +A+  
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNL 310

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEG-WRFFNMMRYECNIEPKLEHYACMVDLL 605
           F++M++  + P+EV+ +SVLY+C+  G  + G W  F + + +  +   L     ++D  
Sbjct: 311 FHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLG--TQLIDFY 368

Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGY 663
           ++ G +  +    + M    +   W +L+ G   + E K+A +    + E  ++P++  +
Sbjct: 369 AKCGYIDRSVEVFKEMSFK-NVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTF 427

Query: 664 YVLLA 668
             +L+
Sbjct: 428 IGVLS 432



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 39/286 (13%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T  S+L  C  L +LE G+ +   I   G+   +  L + L+ M+  CG +   R
Sbjct: 219 EFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLR-RNNTLTTSLIDMYAKCGQVDTAR 277

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           ++F+++D   V  W+ ++  Y++    KE+L LF +MQ   +  +  T   VL   A++G
Sbjct: 278 KLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLG 337

Query: 213 NSRRVKDAH--------------------------------KLFDELSDRDVVSWNCMIS 240
                K  H                                ++F E+S ++V +W  +I 
Sbjct: 338 AYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQ 397

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF-ALKACFS 299
           G   NG  +  LE F  ML      +  T + VLS C++   +  GR  H F +++  F 
Sbjct: 398 GLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGR--HLFNSMRRDFD 455

Query: 300 KE--ISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 342
            E  I     ++D+  + G L+ A +  + M    + V W +++A 
Sbjct: 456 IEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLAS 501


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/643 (39%), Positives = 375/643 (58%), Gaps = 13/643 (2%)

Query: 201 FSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
           FS  L     + +S  +  A KLF ++ + D    N MI GY  +    + + ++  M+ 
Sbjct: 45  FSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVE 104

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
            G  VD  T   VL+ CA  GA+  GR  H   LK  F  ++   N L+  Y  CG    
Sbjct: 105 RGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGC 164

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACA 379
           A  VF++   R VV+W  MI  +  +G+ + A  L   M + + + PD   + S++ ACA
Sbjct: 165 ACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACA 224

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
             G LE GK +H Y KE  +  +L V+NA++DMY KC  +  A+ VFN++  KD++SW +
Sbjct: 225 QLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTS 284

Query: 440 MIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           M+           AL LF  M L   E D +T+  +L ACA   AL++G+ IH  I +  
Sbjct: 285 MLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFE 344

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
           I+ D  +  A+VDMY KCG + LA  +F  +  +++ +W  +I G  MHG G DAI+ F+
Sbjct: 345 INCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFD 404

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            M    + PD+V+FI++L ACSH+GLVDEG   F  M+ +  IEP++EHY C+VDLL R 
Sbjct: 405 QMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRA 464

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
             + +A  FIE MP+  ++ +W +LL  CR      LAEK+   V ELEPD+ G YV+L+
Sbjct: 465 RKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLS 524

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           N+YA   +W+   KLR+++  +G++K PGCSWIE+ G ++ FVAG  SH   ++I ++++
Sbjct: 525 NLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIE 584

Query: 729 RLRLEMKRE-GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNL 787
            +   +  + G+ P T   L + +E EKE +L  HSEKLA+A G+++ P+G  IR+ KNL
Sbjct: 585 EMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNL 644

Query: 788 RVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           RVC DCH   K  SK   REIV RD +RFHHFK+G CSC  FW
Sbjct: 645 RVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 186/385 (48%), Gaps = 36/385 (9%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D  TY  +L  CA L +++ G++ H  + ++G   D  V+ + L+  +  CG       
Sbjct: 109 VDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINA-LIQFYHNCGSFGCACD 167

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL-GIAADSYTFSCVLKCLAVVG 212
           VF++     V  WN++++ +   G  +++  L  +M  L  +  D  T   ++   A +G
Sbjct: 168 VFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLG 227

Query: 213 NSRR--------------------------------VKDAHKLFDELSDRDVVSWNCMIS 240
           N  R                                ++ A ++F+ + ++DV+SW  M+S
Sbjct: 228 NLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLS 287

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G   +G  ++ L +F++M      +D  T+V VLS CA  GAL  G+ +H    K   + 
Sbjct: 288 GLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINC 347

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++     L+DMY+KCG +D A++VF +M  R+V +W ++I G A  G  + AI LF  M 
Sbjct: 348 DLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQME 407

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSM 419
            + + PD     ++L AC+  GL++ G  +   +K    ++  +     ++D+  +   +
Sbjct: 408 HDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKV 467

Query: 420 ADAESVFNQMPVK-DIVSWNTMIGA 443
            DA +    MP+K + V W T++GA
Sbjct: 468 DDALAFIENMPIKANSVLWATLLGA 492



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 159/357 (44%), Gaps = 51/357 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDT-----KTYCSILQLCADLKSLEDGKKVH 119
            +N  I      G  EKA ++L   E +K+D       T  S++  CA L +LE GK +H
Sbjct: 179 TWNIMINAHLNKGLSEKAFDLL--DEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLH 236

Query: 120 SIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
           S   E G+  D+ + + + ++ M+  C D++  + VFN+I    V  W  ++   +K+G 
Sbjct: 237 SYSKELGL--DENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGY 294

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE------------ 226
           F+E+L LF+KMQ   I  D  T   VL   A  G   + K  H L D+            
Sbjct: 295 FQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETA 354

Query: 227 --------------------LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                               +  R+V +WN +I G   +G  E  + +F +M +     D
Sbjct: 355 LVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPD 414

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN--TLLDMYSKCGDLDGAIRV 324
             T + +L  C++ G +  G A+   A+K  F  E    +   ++D+  +   +D A+  
Sbjct: 415 DVTFIALLCACSHAGLVDEGLAMFQ-AMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAF 473

Query: 325 FEKMGERS-VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV---YAITSILHA 377
            E M  ++  V W +++      G FD A ++ R ++   +EPD    Y + S L+A
Sbjct: 474 IENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIE--LEPDSCGRYVMLSNLYA 528


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 277/804 (34%), Positives = 437/804 (54%), Gaps = 55/804 (6%)

Query: 73   FCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
            + + GN  + + V     +  +  +  T+ ++   C  L+    G +V   I + G   +
Sbjct: 272  YSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGF--E 329

Query: 131  DGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
            D V + + L+ MF +   ++E   VF+ ++   +  WN ++  Y+  G  +ESL  F  M
Sbjct: 330  DSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM 389

Query: 190  QSLGIAADSYTF-----------------------------SCVLKC---LAVVGNSRRV 217
            + L    +S T                              S V  C   L +   + R 
Sbjct: 390  RHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRS 449

Query: 218  KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
            +DA  +F  +++RD++SWN M++ Y+ +G    GL++  E+L +G  ++  T  + L+ C
Sbjct: 450  EDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAAC 509

Query: 278  ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
            +N   L+  + VHA  + A F   +   N L+ MY K G +  A +V + M +   V+W 
Sbjct: 510  SNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWN 569

Query: 338  SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC-ACDGLLEIGKDVHDYIKE 396
            ++I G+A     + A++ ++ +  +GI  +   + S+L AC A D LL+ G  +H +I  
Sbjct: 570  ALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVL 629

Query: 397  NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDL 446
               +S  YV N+L+ MYAKCG +  +  +F+ +  K  ++WN M+ A          L +
Sbjct: 630  TGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKI 689

Query: 447  FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
            F  M       D  + +  L A A+LA LE G+++HG +++ G  +D +V NA +DMY K
Sbjct: 690  FGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGK 749

Query: 506  CGVLVLARSLFDMIPA---KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
            CG +     +  M+P    +  +SW I+I+ +  HG    A  TF++M + G +PD V+F
Sbjct: 750  CGEM---HDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTF 806

Query: 563  ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
            +S+L AC+H GLVDEG  +++ M  E  + P +EH  C++DLL R+G LS A  FI+ MP
Sbjct: 807  VSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMP 866

Query: 623  VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
            V P+   W SLL  CRIH  ++LA K AEH+ EL+P +   YVL +NV A + KWE+V+ 
Sbjct: 867  VPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVEN 926

Query: 683  LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
            LR+++    +KK P CSW+++K KV+ F  G   HP A +I + L  L    K  GY P 
Sbjct: 927  LRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPD 986

Query: 743  TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
            T +AL + DE +KE  L  HSE+LA+AFG++N P   T+R+ KNLRVCGDCH + KF+S 
Sbjct: 987  TSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSG 1046

Query: 803  TARREIVLRDSNRFHHFKDGRCSC 826
               R+IVLRD  RFHHF  G+CSC
Sbjct: 1047 IVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 164/602 (27%), Positives = 287/602 (47%), Gaps = 49/602 (8%)

Query: 113 EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHE 172
           ++G +VH  + ++GI + D  +G+ LV  + + G +   +++F ++ +  V  W  LM  
Sbjct: 213 DEGFQVHGFVVKTGI-LGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVG 271

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV---------------------- 210
           YS +GN  E L ++++M+  G++ +  TF+ V     +                      
Sbjct: 272 YSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDS 331

Query: 211 --VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
             V NS          V++A  +FD +++ D++SWN MIS Y  +G+  + L  F  M +
Sbjct: 332 VSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRH 391

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
           L    +  T+ ++LS C++   L +GR +H   +K      +   NTLL +YS+ G  + 
Sbjct: 392 LHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSED 451

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A  VF+ M ER ++SW SM+A Y ++G     +++   +++ G   +     S L AC+ 
Sbjct: 452 AELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSN 511

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              L   K VH  I        L V NAL+ MY K G M +A+ V   MP  D V+WN +
Sbjct: 512 PECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNAL 571

Query: 441 IG----------ALDLFVAMLQNFEP-DGVTMACILPAC-ASLAALERGREIHGYILRHG 488
           IG          A+  +  + +   P + +TM  +L AC A    L+ G  IH +I+  G
Sbjct: 572 IGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTG 631

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
             +D  V N+++ MY KCG L  +  +FD +  K  I+W  M+A    HG G +A+  F 
Sbjct: 632 FESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFG 691

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
           +MR  G+  D+ SF   L A ++  +++EG +   ++  +   E  L      +D+  + 
Sbjct: 692 EMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLV-IKLGFESDLHVTNAAMDMYGKC 750

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDNTGYYVL 666
           G + +  + +   P+      W  L+     H   + A +    + +L  +PD+  +  L
Sbjct: 751 GEMHDVLKMLP-QPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSL 809

Query: 667 LA 668
           L+
Sbjct: 810 LS 811



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 223/450 (49%), Gaps = 50/450 (11%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++ A  +FDE+  R+  SW+ M+SGY+  G+ E+ + +F +M  LG   +   + ++++ 
Sbjct: 145 IEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITA 204

Query: 277 CANCGALM-FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
           C+  G +   G  VH F +K     ++     L+  Y   G +  A ++FE+M + +VVS
Sbjct: 205 CSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVS 264

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE---IGKDVHD 392
           WTS++ GY+  G     + +++ M +EG+  +     ++  +C   GLLE   +G  V  
Sbjct: 265 WTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLG 321

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA--------- 443
           +I +   + S+ V+N+L+ M++   S+ +A  VF+ M   DI+SWN MI A         
Sbjct: 322 HIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRE 381

Query: 444 -LDLFVAM--LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            L  F  M  L N E +  T++ +L  C+S+  L+ GR IHG +++ G+ ++  + N ++
Sbjct: 382 SLRCFHWMRHLHN-ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLL 440

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
            +Y + G    A  +F  +  +DLISW  M+A Y   G   D +    ++ Q G   + V
Sbjct: 441 TLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHV 500

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY--------------ACMVDLLS 606
           +F S L ACS+                EC IE K+ H                 +V +  
Sbjct: 501 TFASALAACSNP---------------ECLIESKIVHALIIVAGFHDFLIVGNALVTMYG 545

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           + G + EA + ++ MP  PD   W +L+ G
Sbjct: 546 KLGMMMEAKKVLQTMP-QPDRVTWNALIGG 574



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 192/377 (50%), Gaps = 29/377 (7%)

Query: 200 TFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS--WNCMISGYIANGVAEKGLEVFKE 257
           T S ++    V   + +VKD     D+L   +  S  W C+  G IA        +VF +
Sbjct: 38  TASALINETPVENFAEQVKD-----DDLKTSNAGSRRWGCL-DGDIA--------KVFLQ 83

Query: 258 MLNLGFNVDLATMVTV-LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
             +  + +     V   L G +   + M G+A+HAF +    +  I   NTL++MYSK G
Sbjct: 84  QQHTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFG 143

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
           +++ A  VF++M  R+  SW++M++GY R G+++ A+ LF  M   G+EP+ + + S++ 
Sbjct: 144 NIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLIT 203

Query: 377 ACACDGLL-EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
           AC+  G + + G  VH ++ +  +   +YV  AL+  Y   G + +A+ +F +MP  ++V
Sbjct: 204 ACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVV 263

Query: 436 SWNT-MIGALDL-----FVAMLQNFEPDGV-----TMACILPACASLAALERGREIHGYI 484
           SW + M+G  D       + + Q    +GV     T A +  +C  L     G ++ G+I
Sbjct: 264 SWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHI 323

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
           +++G     +VAN+++ M+     +  A  +FD +   D+ISW  MI+ Y  HG   +++
Sbjct: 324 IQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESL 383

Query: 545 ATFNDMRQAGIEPDEVS 561
             F+ MR    E +  +
Sbjct: 384 RCFHWMRHLHNETNSTT 400


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 232/624 (37%), Positives = 379/624 (60%), Gaps = 14/624 (2%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A ++FD+L    +  WN +I GY  N   +  L ++  M     + D  T   +L  C+ 
Sbjct: 72  ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE--KMGERSVVSWT 337
              L  GR VHA   +  F  ++   N L+ +Y+KC  L  A  VFE   + ER++VSWT
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           ++++ YA+ G    A+ +F  M +  ++PD  A+ S+L+A  C   L+ G+ +H  + + 
Sbjct: 192 AIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
            ++    +  +L  MYAKCG +A A+ +F++M   +++ WN MI           A+D+F
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311

Query: 448 VAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M+ ++  PD +++   + ACA + +LE+ R ++ Y+ R     D  +++A++DM+ KC
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G +  AR +FD    +D++ W+ MI GYG+HG   +AI+ +  M + G+ P++V+F+ +L
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            AC+HSG+V EGW FFN+M  +  I P+ +HYAC++DLL R G+L +AY  I+ MPV P 
Sbjct: 432 MACNHSGMVREGWWFFNLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
            T+WG+LL  C+ H  V+L E  A+ +F ++P NTG+YV L+N+YA A  W+ V ++R +
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +  +GL K+ GCSW+E++G++  F  G  SHP  ++IE  ++ +   +K  G+      +
Sbjct: 551 MKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
           L + ++ E E  LC HSE++A+A+G+++ P G  +R+TKNLR C +CH   K +SK   R
Sbjct: 611 LHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDR 670

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           EIV+RD+NRFHHFKDG CSC  +W
Sbjct: 671 EIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 230/468 (49%), Gaps = 47/468 (10%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           K++H+ +   G+    G L +KL+    + GD+   R+VF+ +   ++F WN ++  YS+
Sbjct: 38  KQIHARLLVLGLQFS-GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---------------------------- 207
             +F+++L ++  MQ   ++ DS+TF  +LK                             
Sbjct: 97  NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156

Query: 208 ----LAVVGNSRRVKDAHKLFD--ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
               +A+    RR+  A  +F+   L +R +VSW  ++S Y  NG   + LE+F  M  +
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKM 216

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               D   +V+VL+       L  GR++HA  +K     E     +L  MY+KCG +  A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F+KM   +++ W +MI+GYA+ G    AI +F  M+ + + PD  +ITS + ACA  
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
           G LE  + +++Y+  +D +  +++S+AL+DM+AKCGS+  A  VF++   +D+V W+ MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 442 ----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      A+ L+ AM +    P+ VT   +L AC     +  G      +  H I+
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKIN 456

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
             +     ++D+  + G L  A  +   +P +  ++ W  +++    H
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 180/352 (51%), Gaps = 15/352 (4%)

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L+   S  GD+  A +VF+ +    +  W ++I GY+R   F  A+ ++  M    + PD
Sbjct: 59  LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
            +    +L AC+    L++G+ VH  +      + ++V N L+ +YAKC  +  A +VF 
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178

Query: 428 QMPV--KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAAL 474
            +P+  + IVSW  ++           AL++F  M + + +PD V +  +L A   L  L
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDL 238

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           ++GR IH  +++ G+  + ++  ++  MY KCG +  A+ LFD + + +LI W  MI+GY
Sbjct: 239 KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
             +G+  +AI  F++M    + PD +S  S + AC+  G +++    +  +    +    
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG-RSDYRDD 357

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
           +   + ++D+ ++ G++ E  R +    +  D  +W +++ G  +H   + A
Sbjct: 358 VFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 196/415 (47%), Gaps = 38/415 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  +    + + A+ +  + + +++  D+ T+  +L+ C+ L  L+ G+ VH+ + 
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN--KIDNGKVFIWNLLMHEYSKTGNFKE 181
             G   D  V  + L+ ++  C  L   R VF    +    +  W  ++  Y++ G   E
Sbjct: 147 RLGFDADVFV-QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSR----------------------- 215
           +L +F  M+ + +  D      VL    CL  +   R                       
Sbjct: 206 ALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265

Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                 +V  A  LFD++   +++ WN MISGY  NG A + +++F EM+N     D  +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           + + +S CA  G+L   R+++ +  ++ +  ++  ++ L+DM++KCG ++GA  VF++  
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           +R VV W++MI GY   G    AI L+R M R G+ P+      +L AC   G++  G  
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
             + + ++ +         ++D+  + G +  A  V   MPV+  V+ W  ++ A
Sbjct: 446 FFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 17/263 (6%)

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
           K +H  +    +Q S ++   L+   +  G +  A  VF+ +P   I  WN +I      
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 442 ----GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL ++  M L    PD  T   +L AC+ L+ L+ GR +H  + R G  AD  V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 497 NAIVDMYVKCGVLVLARSLFD--MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           N ++ +Y KC  L  AR++F+   +P + ++SWT +++ Y  +G   +A+  F+ MR+  
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           ++PD V+ +SVL A +    + +G     ++++    IEP L     +  + ++ G ++ 
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQVAT 275

Query: 614 AYRFIEMMPVAPDATIWGSLLCG 636
           A    + M  +P+  +W +++ G
Sbjct: 276 AKILFDKMK-SPNLILWNAMISG 297



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 140/315 (44%), Gaps = 40/315 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK----TYCSILQLCADLKSLEDGKKVHS 120
           ++ A +  + + G   +A+E+   S   K+D K       S+L     L+ L+ G+ +H+
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIF--SHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            + + G+ I+  +L S L  M+  CG +   + +F+K+ +  + +WN ++  Y+K G  +
Sbjct: 247 SVVKMGLEIEPDLLIS-LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------------------------ 216
           E++ +F +M +  +  D+ + +  +   A VG+  +                        
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365

Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   V+ A  +FD   DRDVV W+ MI GY  +G A + + +++ M   G + +  
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T + +L  C + G +  G            + +      ++D+  + G LD A  V + M
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485

Query: 329 G-ERSVVSWTSMIAG 342
             +  V  W ++++ 
Sbjct: 486 PVQPGVTVWGALLSA 500



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 100/223 (44%), Gaps = 7/223 (3%)

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           ++IH  +L  G+     +   ++      G +  AR +FD +P   +  W  +I GY  +
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
               DA+  +++M+ A + PD  +F  +L ACS    +  G RF +   +    +  +  
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG-RFVHAQVFRLGFDADVFV 156

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATI--WGSLLCGCRIHHEVKLAEKVAEHV-- 653
              ++ L ++   L  A    E +P+ P+ TI  W +++     + E   A ++  H+  
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPL-PERTIVSWTAIVSAYAQNGEPMEALEIFSHMRK 215

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
            +++PD      +L N +   +  ++ + +   + + GL+  P
Sbjct: 216 MDVKPDWVALVSVL-NAFTCLQDLKQGRSIHASVVKMGLEIEP 257


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/689 (37%), Positives = 400/689 (58%), Gaps = 49/689 (7%)

Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
           M   G+ +D Y+ S  L  +A + +   ++ A K+FDE+   +  +WN +I  Y +    
Sbjct: 54  MIRTGMFSDPYSAS-KLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDP 112

Query: 249 EKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
              +  F +M++       +  T   ++   A   +L  G+++H  A+K+    ++   N
Sbjct: 113 VCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVAN 172

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           +L+  Y  CGDLD A +VF  + E+ VVSW SMI G+ ++G  D A+ LF+ M  E ++ 
Sbjct: 173 SLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKA 232

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
               +  +L ACA    LE G+ V  YI+EN +  +L ++NA++DMY KCGS+ DA+ +F
Sbjct: 233 SHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLF 292

Query: 427 -------------------------------NQMPVKDIVSWNTMIGALD--------LF 447
                                          N MP KDIV+WN +I A +        L 
Sbjct: 293 DAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALL 352

Query: 448 V----AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           V     + +N + + +T+   L ACA + ALE GR IH YI ++GI  +  V +A++ MY
Sbjct: 353 VFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMY 412

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG L  AR +F+ +  +D+  W+ MI G  MHG G +A+  F  M++A ++P+ V+F 
Sbjct: 413 SKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFT 472

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           +V  ACSH+GLVDE    F  M     I P+ +HYAC+VD+L R+G L +A +FIE MP+
Sbjct: 473 NVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPI 532

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            P  ++WG+LL  C+IH  + LAE     + ELEP N G +VLL+N+YA++ KW+ V +L
Sbjct: 533 PPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSEL 592

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R+ +   GLKK PGCS IEI G ++ F++G ++HP ++K+   L  +  ++K  GY P+ 
Sbjct: 593 RKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEM 652

Query: 744 RYAL--INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            + L  I  +EM KE +L  HSEKLA+ +G+++  A + IRV KNLR+CGDCH +AK +S
Sbjct: 653 SHVLQIIEEEEM-KEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLIS 711

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +   REI++RD  RFHHF++G+CSC  FW
Sbjct: 712 QLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 238/519 (45%), Gaps = 85/519 (16%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL--VFMFVTCGDLKEGRRVFNKI 158
           S++  C+ L+ L   K+ H+ +  +G+   D    SKL  +    +   L+  R+VF++I
Sbjct: 36  SLIDRCSSLRQL---KQTHAHMIRTGM-FSDPYSASKLFAIAALSSFASLEYARKVFDEI 91

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA--ADSYTFSCVLKCLAVVGNSRR 216
                F WN L+  Y+   +   S++ F  M S       + YTF  ++K  A V +   
Sbjct: 92  PQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSL 151

Query: 217 VKDAH--------------------------------KLFDELSDRDVVSWNCMISGYIA 244
            +  H                                K+F  + ++DVVSWN MI+G++ 
Sbjct: 152 GQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 211

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G  +K LE+FK+M +        TMV VLS CA    L FGR V ++  +   +  ++ 
Sbjct: 212 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTL 271

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM----- 359
            N +LDMY+KCG ++ A R+F+ M E+  V+WT+M+ GYA    ++ A  +   M     
Sbjct: 272 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDI 331

Query: 360 ---------------------------VREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
                                      +++ I+ +   + S L ACA  G LE+G+ +H 
Sbjct: 332 VAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHS 391

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           YIK+N ++ + YV++AL+ MY+KCG +  A  VFN +  +D+  W+ MIG          
Sbjct: 392 YIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSE 451

Query: 443 ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI-HGYILRHGISADRNVANAIV 500
           A+D+F  M + N +P+GVT   +  AC+    ++    + +     +GI  +      IV
Sbjct: 452 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIV 511

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
           D+  + G L  A    + +P     S W  ++    +H 
Sbjct: 512 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 550



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 192/432 (44%), Gaps = 77/432 (17%)

Query: 83  MEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
           ++++ S  +   +  T+  +++  A++ SL  G+ +H +  +S  V  D  + + L+  +
Sbjct: 120 LDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSA-VGSDVFVANSLIHCY 178

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
            +CGDL    +VF  I    V  WN +++ + + G+  ++L LFKKM+S  + A   T  
Sbjct: 179 FSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMV 238

Query: 203 CVLKCLAVVGN---SRRV-----------------------------KDAHKLFDELSD- 229
            VL   A + +    RRV                             +DA +LFD + + 
Sbjct: 239 GVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 298

Query: 230 ------------------------------RDVVSWNCMISGYIANGVAEKGLEVFKEM- 258
                                         +D+V+WN +IS Y  NG   + L VF E+ 
Sbjct: 299 DNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQ 358

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
           L     ++  T+V+ LS CA  GAL  GR +H++  K          + L+ MYSKCGDL
Sbjct: 359 LQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDL 418

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
           + A  VF  + +R V  W++MI G A  G    A+ +F  M    ++P+    T++  AC
Sbjct: 419 EKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCAC 478

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNA------LMDMYAKCGSMADAESVFNQMPVK 432
           +  GL++  + +  + K   M+SS  +         ++D+  + G +  A      MP+ 
Sbjct: 479 SHTGLVDEAESL--FYK---MESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIP 533

Query: 433 DIVS-WNTMIGA 443
              S W  ++GA
Sbjct: 534 PSTSVWGALLGA 545



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 12/201 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +NA I  + + G   +A+ V +     +  K++  T  S L  CA + +LE G+ +HS I
Sbjct: 334 WNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYI 393

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++GI ++  V  S L+ M+  CGDL++ R VFN ++   VF+W+ ++   +  G   E+
Sbjct: 394 KKNGIKMNFYVT-SALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEA 452

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL-SDRDVVS----WNC 237
           + +F KMQ   +  +  TF+ V    +  G    V +A  LF ++ S   +V     + C
Sbjct: 453 VDMFYKMQEANVKPNGVTFTNVFCACSHTG---LVDEAESLFYKMESSYGIVPEDKHYAC 509

Query: 238 MISGYIANGVAEKGLEVFKEM 258
           ++     +G  EK ++  + M
Sbjct: 510 IVDVLGRSGYLEKAVKFIEAM 530


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 272/745 (36%), Positives = 401/745 (53%), Gaps = 84/745 (11%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           V++ N LM+ YSKTG    +  LF +M        +++++ VL   A  G+   +  + +
Sbjct: 49  VYLMNNLMNVYSKTGYALHARKLFDEMP----LRTAFSWNTVLSAYAKRGD---MDSSCE 101

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
            FD L  RD VSW  MI GY   G   K + +  EM+  G      T+  VL+  A    
Sbjct: 102 FFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRC 161

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD------------------------- 317
           L  G+ VH+F +K      +S +N+LL+MY+KCGD                         
Sbjct: 162 LETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIAL 221

Query: 318 ------LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYA 370
                 +D A+  FE+M ER +V+W SMI+GY + G    A+ +F  M+R+  + PD + 
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFT 281

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG------------- 417
           + S+L ACA    L IG+ +H +I       S  V NAL+ MY++CG             
Sbjct: 282 LASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341

Query: 418 --------------------SMADAESVFNQMPVKDIVSWNTMI----------GALDLF 447
                                M +A+++F+ +  +D+V+W  MI           A++LF
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLF 401

Query: 448 VAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
            +M+ +   P+  T+A +L   +SLA+L  G++IHG  ++ G     +V+NA++ MY K 
Sbjct: 402 RSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461

Query: 507 GVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           G +  A   FD+I   +D +SWT MI     HG   +A+  F  M   G+ PD ++++ V
Sbjct: 462 GSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
             AC+H+GLV++G ++F+MM+    I P L HYACMVDL  R G L EA  FIE MP+ P
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
           D   WGSLL  CR++  + L +  AE +  LEP+N+G Y  LAN+Y+   KWEE  K+R+
Sbjct: 582 DVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +    +KK  G SWIE+K KV+ F      HP   +I   +K++  E+K+ GY P T  
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTAS 701

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L + +E  KE  L  HSEKLA+AFG+++ P   T+R+ KNLRVC DCH   KF+SK   
Sbjct: 702 VLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVG 761

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REI++RD+ RFHHFKDG CSCR +W
Sbjct: 762 REIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 233/515 (45%), Gaps = 97/515 (18%)

Query: 73  FCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           +  +G   KA+ ++    +  I+    T  ++L   A  + LE GKKVHS I + G+  +
Sbjct: 121 YKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGN 180

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
             V  S L+ M+  CGD    + VF+++    +  WN ++  + + G             
Sbjct: 181 VSVSNS-LLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQM----------- 228

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
            L +A                            F+++++RD+V+WN MISGY   G   +
Sbjct: 229 DLAMAQ---------------------------FEQMAERDIVTWNSMISGYNQRGYDLR 261

Query: 251 GLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
            L++F +ML +   + D  T+ +VLS CAN   L  G  +H+  +   F       N L+
Sbjct: 262 ALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALI 321

Query: 310 DMYSKCGD------------------------LDGAIR---------VFEKMGERSVVSW 336
            MYS+CG                         LDG I+         +F+ + +R VV+W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAW 381

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T+MI GY + G++  AI LFR MV E   P+ Y + ++L   +    L  GK +H    +
Sbjct: 382 TAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVK 441

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMI----------GALD 445
           +    S+ VSNAL+ MYAK GS+  A   F+ +   +D VSW +MI           AL+
Sbjct: 442 SGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501

Query: 446 LFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN-----AI 499
           LF  ML +   PD +T   +  AC     + +GR+    +       D+ +        +
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK----DVDKIIPTLSHYACM 557

Query: 500 VDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
           VD++ + G+L  A+   + +P + D+++W  +++ 
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 207/487 (42%), Gaps = 110/487 (22%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKC------------------------------ 315
            + VH   +K+     +   N L+++YSK                               
Sbjct: 33  AQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAK 92

Query: 316 -GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
            GD+D +   F+++ +R  VSWT+MI GY   G +  AIR+   M+REGIEP  + +T++
Sbjct: 93  RGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNV 152

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L + A    LE GK VH +I +  ++ ++ VSN+L++MYAKCG    A+ VF++M VKDI
Sbjct: 153 LASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDI 212

Query: 435 VSWNTMIG-----------------------------------------ALDLFVAMLQN 453
            SWN MI                                          ALD+F  ML++
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRD 272

Query: 454 --FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
               PD  T+A +L ACA+L  L  G +IH +I+  G      V NA++ MY +CG +  
Sbjct: 273 SMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332

Query: 512 ARSL---------------------------------FDMIPAKDLISWTIMIAGYGMHG 538
           AR L                                 FD +  +D+++WT MI GY  HG
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHG 392

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
              +AI  F  M      P+  +  ++L   S    +  G +          I   +   
Sbjct: 393 LYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYS-VSVS 451

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF--EL 656
             ++ + ++ G+++ A R  +++    D   W S++     H   + A ++ E +    L
Sbjct: 452 NALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511

Query: 657 EPDNTGY 663
            PD+  Y
Sbjct: 512 RPDHITY 518



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 158/404 (39%), Gaps = 107/404 (26%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG-------- 146
           D  T  S+L  CA+L+ L  G+++HS I  +G  I  G++ + L+ M+  CG        
Sbjct: 278 DRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDIS-GIVLNALISMYSRCGGVETARRL 336

Query: 147 -------------------------DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
                                    D+ E + +F+ + +  V  W  ++  Y + G + E
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGE 396

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRR---------------------- 216
           ++ LF+ M       +SYT + +L     LA +G+ ++                      
Sbjct: 397 AINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALIT 456

Query: 217 -------VKDAHKLFDELS-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                  +  A + FD +  +RD VSW  MI     +G AE+ LE+F+ ML  G   D  
Sbjct: 457 MYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSK---EISFNNTLLDMYSKCGDLDGAIRVF 325
           T V V S C + G +  GR    F +     K    +S    ++D++ + G L  A    
Sbjct: 517 TYVGVFSACTHAGLVNQGR--QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           EKM                                   IEPDV    S+L AC     ++
Sbjct: 575 EKM----------------------------------PIEPDVVTWGSLLSACRVYKNID 600

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           +GK   + +   + ++S   S AL ++Y+ CG   +A  +   M
Sbjct: 601 LGKVAAERLLLLEPENSGAYS-ALANLYSACGKWEEAAKIRKSM 643


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 235/589 (39%), Positives = 361/589 (61%), Gaps = 25/589 (4%)

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY-------SKCGDLD 319
           L ++   L  CA  G    G ++HA AL++    +    N LL++Y       S   ++D
Sbjct: 58  LTSLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMD 117

Query: 320 GAI-------RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           G+        +VF++M E+ VVSW +++ G A  G    A+ L R M R+G +PD + ++
Sbjct: 118 GSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLS 177

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           S+L   A    +  G ++H +   N     ++V ++L+DMYA C     +  VF+ +PV+
Sbjct: 178 SVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR 237

Query: 433 DIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIH 481
           D + WN+M+           AL LF  ML +  +P  VT + ++PAC +LA+L  G+++H
Sbjct: 238 DAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLH 297

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
            Y++R G   +  ++++++DMY KCG + +AR +FD I + D++SWT MI G+ +HG   
Sbjct: 298 AYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAR 357

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
           +A+  F+ M    ++P+ ++F++VL ACSH+GLVD+GW++FN M     I P LEH+A +
Sbjct: 358 EALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAAL 417

Query: 602 VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNT 661
            D L R G L EAY FI  M + P A++W +LL  C++H    LAE+VA+ +F+LEP + 
Sbjct: 418 ADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSM 477

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK 721
           G +++L+N Y+ + +W E   LR+ + ++G++K P CSWIE+K K ++FVA   SHP  +
Sbjct: 478 GSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYE 537

Query: 722 KIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
           +I   L     +M R+GY P T     + +E +K   LCGHSEKLA+ FGI++ P G TI
Sbjct: 538 RIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTI 597

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           RV KNLRVC DCH + KF+SK   REIV+RD+NRFHHFKDG CSC  FW
Sbjct: 598 RVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 176/339 (51%), Gaps = 13/339 (3%)

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
           G++  ++   K+FDE+ ++DVVSWN ++ G   +G   + L + +EM   G   D  T+ 
Sbjct: 118 GSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLS 177

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +VL   A    +  G  +H FA +  F  ++   ++L+DMY+ C   D +++VF+ +  R
Sbjct: 178 SVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR 237

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             + W SM+AG A+ G  D A+ LFR M+  GI+P     +S++ AC     L +GK +H
Sbjct: 238 DAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLH 297

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---------- 441
            Y+       ++++S++L+DMY KCG+++ A  +F+++   DIVSW  MI          
Sbjct: 298 AYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAR 357

Query: 442 GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAI 499
            AL LF  M L N +P+ +T   +L AC+    +++G +    +  H GI        A+
Sbjct: 358 EALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAAL 417

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
            D   + G L  A +    +  K   S W+ ++    +H
Sbjct: 418 ADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVH 456



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 163/330 (49%), Gaps = 34/330 (10%)

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           L+  R+VF+++    V  WN L+   +++G   E+L L ++M   G   DS+T S VL  
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPI 182

Query: 208 LAVVGNSRRVKDAH--------------------------------KLFDELSDRDVVSW 235
            A   + RR  + H                                K+FD L  RD + W
Sbjct: 183 FAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILW 242

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N M++G   NG  ++ L +F+ ML+ G      T  +++  C N  +L+ G+ +HA+ ++
Sbjct: 243 NSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIR 302

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
             F   +  +++L+DMY KCG++  A R+F+++    +VSWT+MI G+A  G    A+ L
Sbjct: 303 GGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVL 362

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYA 414
           F  M    ++P+     ++L AC+  GL++ G    + + ++  +  SL    AL D   
Sbjct: 363 FDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLG 422

Query: 415 KCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
           + G + +A +  + M +K   S W+T++ A
Sbjct: 423 RPGKLEEAYNFISGMKIKPTASVWSTLLRA 452



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 162/423 (38%), Gaps = 84/423 (19%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           AE GR  E   L + M      +  K D+ T  S+L + A+   +  G ++H     +G 
Sbjct: 149 AESGRHGEALGLVREMW----RDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGF 204

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
             DD  +GS L+ M+  C       +VF+ +      +WN ++   ++ G+  E+L LF+
Sbjct: 205 H-DDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFR 263

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------------- 221
           +M   GI     TFS ++     + +    K  H                          
Sbjct: 264 RMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCG 323

Query: 222 ------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
                 ++FD +   D+VSW  MI G+  +G A + L +F  M       +  T + VL+
Sbjct: 324 NVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLT 383

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C++ G +                K   + N++ D Y     L+    + + +G      
Sbjct: 384 ACSHAGLV---------------DKGWKYFNSMSDHYGIVPSLEHHAALADTLG------ 422

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC--DGLL--EIGKDVH 391
                    R G  + A     GM    I+P     +++L AC    + +L  E+ K + 
Sbjct: 423 ---------RPGKLEEAYNFISGM---KIKPTASVWSTLLRACKVHKNTVLAEEVAKKIF 470

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VSWNTMIGALDL 446
           D ++   M S + +SN     Y+  G   +A  +   M  K +      SW  +     +
Sbjct: 471 D-LEPRSMGSHIILSNT----YSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHV 525

Query: 447 FVA 449
           FVA
Sbjct: 526 FVA 528



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 93/192 (48%), Gaps = 11/192 (5%)

Query: 43  HSSCTINPISASISKTLVCKTKN-YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TY 99
           +++CT    S  +   L  +    +N+ +    + G++++A+ +      S I     T+
Sbjct: 218 YANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTF 277

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDG--VLGSKLVFMFVTCGDLKEGRRVFNK 157
            S++  C +L SL  GK++H+ +   G    DG   + S L+ M+  CG++   RR+F++
Sbjct: 278 SSLIPACGNLASLLLGKQLHAYVIRGGF---DGNVFISSSLIDMYCKCGNVSIARRIFDR 334

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           I +  +  W  ++  ++  G  +E+L LF +M+   +  +  TF  VL   +  G    V
Sbjct: 335 IQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAG---LV 391

Query: 218 KDAHKLFDELSD 229
               K F+ +SD
Sbjct: 392 DKGWKYFNSMSD 403


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/759 (35%), Positives = 427/759 (56%), Gaps = 27/759 (3%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T+ S+L+ C+ +K L  GK+VH ++  SG    D  + + LV M+  C +  + +
Sbjct: 154 KCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE-GDVFVANTLVVMYAKCDEFLDSK 212

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           R+F++I    V  WN L   Y +     E++ LF +M   GI  + ++ S ++     + 
Sbjct: 213 RLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLR 272

Query: 213 NSRRVKDAHKLFDELS-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
           +S R K  H    +L  D D  S N ++  Y   G     + VF+++       D+ +  
Sbjct: 273 DSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ----PDIVSWN 328

Query: 272 TVLSGCA----NCGAL----MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
            V++GC     +  AL       R +H+  +K     ++  +  L+DMYSKC  L+ A  
Sbjct: 329 AVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARM 388

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
            F  + E+ +++W ++I+GY++      A+ LF  M +EGI  +   +++IL + A   +
Sbjct: 389 AFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQV 448

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
           + + + VH    ++   S +YV N+L+D Y KC  + DAE +F +  + D+VS+ +MI A
Sbjct: 449 VHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITA 508

Query: 444 ----------LDLFVAMLQNFE--PDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                     L LF+ M Q+ E  PD    + +L ACA+L+A E+G+++H +IL++G   
Sbjct: 509 YAQYGQGEEALKLFLEM-QDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVL 567

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D    N++V+MY KCG +  A   F  +  + ++SW+ MI G   HG G  A+  FN M 
Sbjct: 568 DIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQML 627

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
           + G+ P+ ++ +SVL AC+H+GLV E   +F  M      +P  EHYACM+DLL R G +
Sbjct: 628 KEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKI 687

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
           +EA   +  MP   +A++WG+LL   RIH +V+L  + AE +F LEP+ +G +VLLAN+Y
Sbjct: 688 NEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIY 747

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           A A KWE V ++R  +    +KK PG SWIE+K KV  F+ G  SH  +++I + L  L 
Sbjct: 748 ASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELS 807

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
             M + GY P     L + ++ EKE+ L  HSEKLA+AFG++  P G  IRV KNLRVC 
Sbjct: 808 DLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCV 867

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   K++ K   REI++RD NRFHHFKDG CSC  +W
Sbjct: 868 DCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 171/669 (25%), Positives = 305/669 (45%), Gaps = 108/669 (16%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           +Y  +L  C   KSL  G ++H+ I +SG+  DD  + + L+ ++  C      R++ ++
Sbjct: 58  SYSKLLSQCCTTKSLRPGLQIHAHITKSGLS-DDPSIRNHLINLYSKCRXFGYARKLVDE 116

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
                +  W+ L+  Y++ G    +L  F +M  LG+  + +TFS VLK  ++V + R  
Sbjct: 117 SSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIG 176

Query: 218 KDAH--------------------------------KLFDELSDRDVVSWNCMISGYIAN 245
           K  H                                +LFDE+ +R+VVSWN + S Y+  
Sbjct: 177 KQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQX 236

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
               + + +F EM+  G   +  ++ ++++ C        G+ +H + +K  +  +    
Sbjct: 237 DFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSA 296

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N L+DMY+K GDL  AI VFEK+ +  +VSW ++IAG       + A+ L   M R+   
Sbjct: 297 NALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ--- 353

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
                                   +H  + + DM+S L+VS  L+DMY+KC  + DA   
Sbjct: 354 ------------------------LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMA 389

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAAL 474
           FN +P KD+++WN +I           AL LFV M  +    +  T++ IL + A L  +
Sbjct: 390 FNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVV 449

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
              R++HG  ++ G  +D  V N+++D Y KC  +  A  +F+     DL+S+T MI  Y
Sbjct: 450 HVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAY 509

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF-FNMMRY------ 587
             +G G +A+  F +M+   ++PD     S+L AC++    ++G +   ++++Y      
Sbjct: 510 AQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDI 569

Query: 588 -----------ECN------------IEPKLEHYACMVDLLSRTGNLSEAYRFIEMM--- 621
                      +C              E  +  ++ M+  L++ G+  +A +    M   
Sbjct: 570 FAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKE 629

Query: 622 PVAPDATIWGSLLCGCR---IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
            V+P+     S+L  C    +  E KL  +  E +F  +P    +Y  + ++   A K  
Sbjct: 630 GVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQE-HYACMIDLLGRAGKIN 688

Query: 679 EVKKLREKI 687
           E  +L  K+
Sbjct: 689 EAVELVNKM 697



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 171/639 (26%), Positives = 292/639 (45%), Gaps = 99/639 (15%)

Query: 154 VFNKIDNGKV----FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
           + N ID G        ++ L+ +   T + +  L +   +   G++ D    S     + 
Sbjct: 43  ILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDP---SIRNHLIN 99

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           +    R    A KL DE S+ D+VSW+ +ISGY  NG+    L  F EM  LG   +  T
Sbjct: 100 LYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFT 159

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
             +VL  C+    L  G+ VH   + + F  ++   NTL+ MY+KC +   + R+F+++ 
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ER+VVSW ++ + Y +      A+ LF  MV  GI+P+ ++++S+++AC        GK 
Sbjct: 220 ERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKI 279

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVA 449
           +H Y+ +       + +NAL+DMYAK G +ADA SVF ++   DIVSWN +I    L   
Sbjct: 280 IHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEH 339

Query: 450 MLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
             Q  E  G                +  R++H  +++  + +D  V+  +VDMY KC +L
Sbjct: 340 HEQALELLG----------------QMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 383

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA- 568
             AR  F+++P KDLI+W  +I+GY  +    +A++ F +M + GI  ++ +  ++L + 
Sbjct: 384 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 443

Query: 569 -------------------------------------CSHSGLVDEGWRFFNMMRYECNI 591
                                                CSH   V++  R F     EC I
Sbjct: 444 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH---VEDAERIFE----ECTI 496

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYR-FIEM--MPVAPDATIWGSLLCGCRIHHEVKLAEK 648
              L  +  M+   ++ G   EA + F+EM  M + PD  +  SLL  C      +  ++
Sbjct: 497 -GDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ 555

Query: 649 VAEH------VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIE 702
           +  H      V ++   N+     L N+YA+    ++  +   +++ RG+      SW  
Sbjct: 556 LHVHILKYGFVLDIFAGNS-----LVNMYAKCGSIDDAGRAFSELTERGI-----VSW-- 603

Query: 703 IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
                +  + G + H H ++   L      +M +EG  P
Sbjct: 604 -----SAMIGGLAQHGHGRQALQLFN----QMLKEGVSP 633


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 255/672 (37%), Positives = 382/672 (56%), Gaps = 46/672 (6%)

Query: 205 LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
           L+ + V  N      A +LFD +   D  + + +IS    +G++ + ++++  +   G  
Sbjct: 102 LRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIK 161

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D+   +     CA  G  +  + VH  A +     ++   N L+  Y KC  ++GA RV
Sbjct: 162 PDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRV 221

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F+ +  R VVSWTS+ + Y + G     + +FR M   G++P+   ++SIL ACA    L
Sbjct: 222 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 281

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA- 443
           + GK++H +   + M  +L+V +AL+ +YAKC S+ +A  VF+ MP +D+VSWN ++ A 
Sbjct: 282 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 341

Query: 444 ---------LDLFVAMLQN------------------------------------FEPDG 458
                      LF+ M ++                                    F+P+ 
Sbjct: 342 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 401

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           +T++ ILPAC+    L  G+EIH Y+ RH    D     A++ MY KCG L L+R++FDM
Sbjct: 402 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 461

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +  KD+++W  MI    MHG G +A+  F+ M  + ++P+ V+F  VL  CSHS LV+EG
Sbjct: 462 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 521

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
            + FN M  +  +EP   HY+C+VD+ SR G L+EAY+FI+ MP+ P A+ WG+LL  CR
Sbjct: 522 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACR 581

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
           ++  V+LA+  A+ +FE+EP+N G YV L N+   A+ W E  ++R  +  RG+ K PGC
Sbjct: 582 VYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGC 641

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           SW+++  KV+ FV G  S+  + KI + L  L  +MK  GY P T Y L + D+ EK  +
Sbjct: 642 SWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAES 701

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
           LC HSEKLA+AFGILNL    TIRV KNLR+CGDCH   K+MSK     IV+RDS RFHH
Sbjct: 702 LCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHH 761

Query: 819 FKDGRCSCRGFW 830
           FK+G CSC+  W
Sbjct: 762 FKNGNCSCKDLW 773



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 188/419 (44%), Gaps = 86/419 (20%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           VF+ N L+H Y K                              KC         V+ A +
Sbjct: 199 VFVGNALIHAYGKC-----------------------------KC---------VEGARR 220

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +FD+L  RDVVSW  + S Y+  G   KG++VF+EM   G   +  T+ ++L  CA    
Sbjct: 221 VFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKD 280

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G+ +H FA++      +   + L+ +Y+KC  +  A  VF+ M  R VVSW  ++  
Sbjct: 281 LKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTA 340

Query: 343 Y----------------AREGV-------------------FDGAIRLFRGMVREGIEPD 367
           Y                +R+GV                    + A+ +FR M + G +P+
Sbjct: 341 YFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPN 400

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
              I+SIL AC+    L +GK++H Y+  +     L  + AL+ MYAKCG +  + +VF+
Sbjct: 401 EITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFD 460

Query: 428 QMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALER 476
            M  KD+V+WNTMI           AL LF  M L   +P+ VT   +L  C+    +E 
Sbjct: 461 MMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEE 520

Query: 477 GREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAG 533
           G +I   + R H +  D N  + +VD+Y + G L  A      +P +   S W  ++A 
Sbjct: 521 GVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 579



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 179/383 (46%), Gaps = 47/383 (12%)

Query: 73  FCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           + + G   K M+V      S  K +  T  SIL  CA+LK L+ GK++H      G+V++
Sbjct: 240 YVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVN 299

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
             V  S LV ++  C  ++E R VF+ + +  V  WN ++  Y K   +++   LF KM 
Sbjct: 300 LFVC-SALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMS 358

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
             G+ AD  T                                  WN +I G + NG +E+
Sbjct: 359 RDGVRADEAT----------------------------------WNAVIGGCMENGRSEE 384

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            +E+F++M  +GF  +  T+ ++L  C+    L  G+ +H +  +     +++    LL 
Sbjct: 385 AVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLY 444

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MY+KCGDL+ +  VF+ M  + VV+W +MI   A  G    A+ LF  M+   ++P+   
Sbjct: 445 MYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVT 504

Query: 371 ITSILHACACDGLLEIGKDV-----HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
            T +L  C+   L+E G  +      D++ E D        + ++D+Y++ G + +A   
Sbjct: 505 FTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANH----YSCVVDIYSRAGRLNEAYKF 560

Query: 426 FNQMPVKDIVS-WNTMIGALDLF 447
              MP++   S W  ++ A  ++
Sbjct: 561 IQGMPMEPTASAWGALLAACRVY 583



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 11/200 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA IG   E G  E+A+E+    +K   K +  T  SIL  C+  ++L  GK++H  + 
Sbjct: 369 WNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVF 428

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
               V  D    + L++M+  CGDL   R VF+ +    V  WN ++   +  GN KE+L
Sbjct: 429 RHWKV-GDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEAL 487

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLF-----DELSDRDVVSWNCM 238
           +LF KM    +  +S TF+ VL   +   +SR V++  ++F     D L + D   ++C+
Sbjct: 488 FLFDKMLLSRVQPNSVTFTGVLSGCS---HSRLVEEGVQIFNSMGRDHLVEPDANHYSCV 544

Query: 239 ISGYIANGVAEKGLEVFKEM 258
           +  Y   G   +  +  + M
Sbjct: 545 VDIYSRAGRLNEAYKFIQGM 564


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 275/741 (37%), Positives = 410/741 (55%), Gaps = 67/741 (9%)

Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
           +  +K +   +  G + +  R+F  +       +N ++  YS  G    +  LF+ +   
Sbjct: 39  IRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR- 97

Query: 193 GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL 252
               D+Y+++ +L  LAV   S  + DA  LFDE+  RD V++N MIS +  +G+    +
Sbjct: 98  ---PDNYSYNTLLHALAV---SSSLADARGLFDEMPVRDSVTYNVMISSHANHGL----V 147

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN----NTL 308
            + +   +L    D  +   +L+     G +   R +        F+    ++    N L
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGL--------FNSRTEWDVISWNAL 199

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGIEPD 367
           +  Y + G +  A  +F++M  R VVSW  M++GYAR G    A RLF    VR     D
Sbjct: 200 MSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR-----D 254

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQS-----SLYVSNALMDM---------- 412
           V+  T+++   A +G+LE  + V D + E +  S     + Y+   +MD           
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPC 314

Query: 413 ------------YAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM 450
                       YA+ G + +A++VF+ MP KD VSW  M+ A          L LF+ M
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374

Query: 451 LQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
            +  E  +    AC+L  CA +AALE G ++HG ++R G      V NA++ MY KCG +
Sbjct: 375 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNM 434

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             AR+ F+ +  +D++SW  MIAGY  HGFG +A+  F+ MR    +PD+++ + VL AC
Sbjct: 435 EDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAAC 494

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           SHSGLV++G  +F  M ++  +  K EHY CM+DLL R G L+EA+  ++ MP  PD+T+
Sbjct: 495 SHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM 554

Query: 630 WGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISR 689
           WG+LL   RIH   +L    AE +FELEP+N G YVLL+N+YA + KW + +K+R  +  
Sbjct: 555 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 614

Query: 690 RGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALIN 749
           RG+KK PG SWIE++ KV+ F AG   HP  +KI + L+ L + MK+ GY   T   L +
Sbjct: 615 RGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHD 674

Query: 750 ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIV 809
            +E EKE  L  HSEKLA+A+GILN+P G+ IRV KNLRVCGDCH   K++S    R I+
Sbjct: 675 VEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLIL 734

Query: 810 LRDSNRFHHFKDGRCSCRGFW 830
           LRDSNRFHHF+ G CSC  +W
Sbjct: 735 LRDSNRFHHFRGGSCSCGDYW 755


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/638 (40%), Positives = 370/638 (57%), Gaps = 49/638 (7%)

Query: 205 LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
           +K +    + + V  A K+FDE+ +R+V+  N MI  Y+ NG   +G++VF  M      
Sbjct: 78  VKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVR 137

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D  T   VL  C+  G ++ GR +H  A K   S  +   N L+ MY KCG L  A  V
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
            ++M  R VVSW S++ GYA+   FD A+ + R M    I  D   + S+L A       
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA------- 250

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
                V +   EN M    YV     DM+ K G              K +VSWN MIG  
Sbjct: 251 -----VSNTTTENVM----YVK----DMFFKMGK-------------KSLVSWNVMIGVY 284

Query: 443 --------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                   A++L+  M  + FEPD V++  +LPAC   +AL  G++IHGYI R  +  + 
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            + NA++DMY KCG L  AR +F+ + ++D++SWT MI+ YG  G GCDA+A F+ ++ +
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G+ PD ++F++ L ACSH+GL++EG   F +M     I P+LEH ACMVDLL R G + E
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           AYRFI+ M + P+  +WG+LL  CR+H +  +    A+ +F+L P+ +GYYVLL+N+YA+
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
           A +WEEV  +R  +  +GLKKNPG S +E+   ++ F+ G  SHP + +I   L  L  +
Sbjct: 525 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKK 584

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP-----AGQTIRVTKNLR 788
           MK  GY P +  AL + +E +KE  L  HSEKLA+ F ++N       +  TIR+TKNLR
Sbjct: 585 MKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLR 644

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           +CGDCH  AK +S+   REI++RD+NRFH F+ G CSC
Sbjct: 645 ICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 682



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 189/424 (44%), Gaps = 88/424 (20%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDD----GVLGSKLVFMFVTCGDLKEGRRVFNK 157
           +L    D+++L   + VHS      I+++D      LG KL+  + +  D+   R+VF++
Sbjct: 48  VLDTYPDIRTL---RTVHS-----RIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNS 214
           I    V I N+++  Y   G + E + +F  M    +  D YTF CVLK   C   +   
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159

Query: 215 RRV-----------------------------KDAHKLFDELSDRDVVSWNCMISGYIAN 245
           R++                              +A  + DE+S RDVVSWN ++ GY  N
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
              +  LEV +EM ++  + D  TM ++L   +N                          
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSN-------------------------T 254

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
            T   MY K         +F KMG++S+VSW  MI  Y +  +   A+ L+  M  +G E
Sbjct: 255 TTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFE 306

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           PD  +ITS+L AC     L +GK +H YI+   +  +L + NAL+DMYAKCG +  A  V
Sbjct: 307 PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDV 366

Query: 426 FNQMPVKDIVSWNTMIGALDL------FVAMLQNFE-----PDGVTMACILPACASLAAL 474
           F  M  +D+VSW  MI A          VA+    +     PD +     L AC+    L
Sbjct: 367 FENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLL 426

Query: 475 ERGR 478
           E GR
Sbjct: 427 EEGR 430



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 182/355 (51%), Gaps = 8/355 (2%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T+  +L+ C+   ++  G+K+H    + G+      +G+ LV M+  CG L E R
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS-STLFVGNGLVSMYGKCGFLSEAR 195

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--V 210
            V +++    V  WN L+  Y++   F ++L + ++M+S+ I+ D+ T + +L  ++   
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
             N   VKD   +F ++  + +VSWN MI  Y+ N +  + +E++  M   GF  D  ++
Sbjct: 256 TENVMYVKD---MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +VL  C +  AL  G+ +H +  +      +   N L+DMY+KCG L+ A  VFE M  
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS 372

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R VVSWT+MI+ Y   G    A+ LF  +   G+ PD  A  + L AC+  GLLE G+  
Sbjct: 373 RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 432

Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
              + ++  +   L     ++D+  + G + +A      M ++ +   W  ++GA
Sbjct: 433 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 162/350 (46%), Gaps = 24/350 (6%)

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           R VH+  +        S    L+  Y+   D+  A +VF+++ ER+V+    MI  Y   
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G +   +++F  M    + PD Y    +L AC+C G + IG+ +H    +  + S+L+V 
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILP 466
           N L+ MY KCG +++A  V ++M  +D+VSWN+++      V   QN   D         
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLV------VGYAQNQRFDD-------- 224

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
                 ALE  RE+    + H      ++  A+ +   +  + V  + +F  +  K L+S
Sbjct: 225 ------ALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYV--KDMFFKMGKKSLVS 276

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           W +MI  Y  +    +A+  ++ M   G EPD VS  SVL AC  +  +  G +    + 
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            +  I P L     ++D+ ++ G L +A    E M  + D   W +++  
Sbjct: 337 RKKLI-PNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMISA 384



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 5/151 (3%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  IG + +     +A+E LYS  ++   + D  +  S+L  C D  +L  GKK+H  
Sbjct: 276 SWNVMIGVYMKNAMPVEAVE-LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I E   +I + +L + L+ M+  CG L++ R VF  + +  V  W  ++  Y  +G   +
Sbjct: 335 I-ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD 393

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           ++ LF K+Q  G+  DS  F   L   +  G
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAG 424


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 275/741 (37%), Positives = 410/741 (55%), Gaps = 67/741 (9%)

Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
           +  +K +   +  G + +  R+F  +       +N ++  YS  G    +  LF+ +   
Sbjct: 39  IRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR- 97

Query: 193 GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL 252
               D+Y+++ +L  LAV   S  + DA  LFDE+  RD V++N MIS +  +G+    +
Sbjct: 98  ---PDNYSYNTLLHALAV---SSSLADARGLFDEMPVRDSVTYNVMISSHANHGL----V 147

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN----NTL 308
            + +   +L    D  +   +L+     G +   R +        F+    ++    N L
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGL--------FNSRTEWDAISWNAL 199

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGIEPD 367
           +  Y + G +  A  +F++M  R VVSW  M++GYAR G    A RLF    VR     D
Sbjct: 200 MSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR-----D 254

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQS-----SLYVSNALMDM---------- 412
           V+  T+++   A +G+LE  + V D + E +  S     + Y+   +MD           
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPC 314

Query: 413 ------------YAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM 450
                       YA+ G + +A++VF+ MP KD VSW  M+ A          L LF+ M
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374

Query: 451 LQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
            +  E  +    AC+L  CA +AALE G ++HG ++R G      V NA++ MY KCG +
Sbjct: 375 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNM 434

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             AR+ F+ +  +D++SW  MIAGY  HGFG +A+  F+ MR    +PD+++ + VL AC
Sbjct: 435 EDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAAC 494

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           SHSGLV++G  +F  M ++  +  K EHY CM+DLL R G L+EA+  ++ MP  PD+T+
Sbjct: 495 SHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM 554

Query: 630 WGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISR 689
           WG+LL   RIH   +L    AE +FELEP+N G YVLL+N+YA + KW + +K+R  +  
Sbjct: 555 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 614

Query: 690 RGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALIN 749
           RG+KK PG SWIE++ KV+ F AG   HP  +KI + L+ L + MK+ GY   T   L +
Sbjct: 615 RGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHD 674

Query: 750 ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIV 809
            +E EKE  L  HSEKLA+A+GILN+P G+ IRV KNLRVCGDCH   K++S    R I+
Sbjct: 675 VEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLIL 734

Query: 810 LRDSNRFHHFKDGRCSCRGFW 830
           LRDSNRFHHF+ G CSC  +W
Sbjct: 735 LRDSNRFHHFRGGSCSCGDYW 755


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/744 (35%), Positives = 402/744 (54%), Gaps = 92/744 (12%)

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
           DD  + + LV MFV CG +    R+F +I    +F  N ++  Y KT     +L      
Sbjct: 171 DDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHAL------ 224

Query: 190 QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                           +LFD + +RDVVSWN M+S    +G   
Sbjct: 225 --------------------------------ELFDSMPERDVVSWNMMVSALSQSGRVR 252

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L++  +M + G  +D  T  + L+ CA   +L +G+ +HA  ++     +    + L+
Sbjct: 253 EALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALV 312

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           ++Y+KCG    A  VF  + +R+ V+WT +IAG+ + G F  ++ LF  M  E +  D +
Sbjct: 313 ELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQF 372

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           A+ +++  C     L +G+ +H    ++    ++ VSN+L+ MYAKC ++  AES+F  M
Sbjct: 373 ALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFM 432

Query: 430 PVKDIVSWNTMIGA-----------------------------------------LDLFV 448
             KDIVSW +MI A                                         L ++ 
Sbjct: 433 NEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYN 492

Query: 449 AML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
            ML  ++  PD VT   +   CA L A + G +I G  ++ G+  D +VANA++ MY KC
Sbjct: 493 VMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKC 552

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G ++ AR +FD +  KD++SW  MI GY  HG G  AI  F+D+ + G +PD +S+++VL
Sbjct: 553 GRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVL 612

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
             CSHSGLV EG  +F+MM+   NI P LEH++CMVDLL R G+L+EA   I+ MP+ P 
Sbjct: 613 SGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPT 672

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
           A +WG+LL  C+IH   +LAE  A+HVFEL+  ++G Y+L+A +YA+A K ++  ++R+ 
Sbjct: 673 AEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKL 732

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +  +G+KKNPG SW+E+  KV++F A   SHP    I   L  L  ++ R GY       
Sbjct: 733 MRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGY------- 785

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
            +  D    E+    HSEKLA+AFG+++LPA   I + KNLR+CGDCH + K +S    R
Sbjct: 786 -VRTDSPRSEIH---HSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGR 841

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           E V+RD+ RFHHF  G CSC  +W
Sbjct: 842 EFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 211/447 (47%), Gaps = 69/447 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +    + G + +A++++    S+  ++D+ TY S L  CA L SL  GK++H+ +
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 296

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +   ID  V  S LV ++  CG  KE + VFN + +     W +L+  + + G F ES
Sbjct: 297 IRNLPCIDPYV-ASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTES 355

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK--------CLA----------------VVGNS---- 214
           + LF +M++  +  D +  + ++         CL                 VV NS    
Sbjct: 356 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 415

Query: 215 ----RRVKDAHKLFDELSDRDVVS-------------------------------WNCMI 239
                 ++ A  +F  ++++D+VS                               WN M+
Sbjct: 416 YAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAML 475

Query: 240 SGYIANGVAEKGLEVFKEMLN-LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
             YI +G  E GL ++  ML+      D  T VT+  GCA+ GA   G  +    +K   
Sbjct: 476 GAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 535

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             + S  N ++ MYSKCG +  A +VF+ +  + +VSW +MI GY++ G+   AI +F  
Sbjct: 536 ILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 595

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCG 417
           +++ G +PD  +  ++L  C+  GL++ GK   D +K  +++   L   + ++D+  + G
Sbjct: 596 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAG 655

Query: 418 SMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +A+ + ++MP+K     W  ++ A
Sbjct: 656 HLTEAKDLIDEMPMKPTAEVWGALLSA 682



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 150/591 (25%), Positives = 250/591 (42%), Gaps = 101/591 (17%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA-ADSYTFSCVLKCLAVVGNSRRVKDAH 221
           VF+ N L+H Y   G   ++    +++    IA  +  T + +L     +G   R+ DA 
Sbjct: 39  VFLQNTLLHAYLSCGALPDA----RRLLLTDIAHPNVITHNVMLNGYVKLG---RLSDAV 91

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           +LF  +  RDV SWN ++SGY  +      LE F  M   G +   A   T      +CG
Sbjct: 92  ELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNA--FTFAYAMKSCG 149

Query: 282 ALMFGRAVHAFALKACFSKEISFNNT-----LLDMYSKCGDLDGAIRVF----------- 325
           AL  G    A  L     K  S +++     L+DM+ +CG +D A R+F           
Sbjct: 150 AL--GERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCR 207

Query: 326 --------------------EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
                               + M ER VVSW  M++  ++ G    A+ +   M  +G+ 
Sbjct: 208 NSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
            D    TS L ACA    L  GK +H  +  N      YV++AL+++YAKCG   +A+ V
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGV 327

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAAL 474
           FN +  ++ V+W  +I           +++LF  M       D   +A ++  C S   L
Sbjct: 328 FNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 387

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
             GR++H   L+ G      V+N+++ MY KC  L  A S+F  +  KD++SWT MI  +
Sbjct: 388 CLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAH 447

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
              G    A   F+ M    +    +++ ++L A    G  ++G R +N+M  E ++ P 
Sbjct: 448 SQVGNIAKAREFFDGMSTKNV----ITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPD 503

Query: 595 LEHYACM-----------------------------------VDLLSRTGNLSEAYRFIE 619
              Y  +                                   + + S+ G + EA +  +
Sbjct: 504 WVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFD 563

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
            + V  D   W +++ G   H   K A ++ + + +   +PD   Y  +L+
Sbjct: 564 FLNV-KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 269/762 (35%), Positives = 427/762 (56%), Gaps = 46/762 (6%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI-WNLLM 170
           L  G+ +H  +    ++  D V+ + L+ ++  CG +   R VF+ +   +  + W  + 
Sbjct: 64  LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTF----------------------------- 201
              ++ G  + SL L  +M   G+  ++YT                              
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183

Query: 202 --------SCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
                   S ++  LA  G+   +  A K+FD L ++ VV W  +IS Y+    AE+ +E
Sbjct: 184 WGTDVAVGSALIDMLARNGD---LASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           +F + L  GF  D  TM +++S C   G++  G  +H+ AL+   + +   +  L+DMY+
Sbjct: 241 LFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYA 300

Query: 314 KCG---DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI-RLFRGMVREGIEPDVY 369
           K      +D A +VFE+M +  V+SWT++I+GY + GV +  +  LF  M+ E I+P+  
Sbjct: 301 KSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHI 360

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
             +SIL +CA     + G+ VH ++ +++  S+  V NAL+ MYA+ G M +A  VFNQ+
Sbjct: 361 TYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQL 420

Query: 430 PVKDIVSWNTMIGALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
             + ++   T      L   +++ +      T A ++ A AS+  L +G+++H   L+ G
Sbjct: 421 YERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAG 480

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
             +DR V+N++V MY +CG L  A   F+ +  +++ISWT MI+G   HG+   A++ F+
Sbjct: 481 FGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFH 540

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
           DM   G++P++V++I+VL ACSH GLV EG  +F  M+ +  + P++EHYACMVDLL+R+
Sbjct: 541 DMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARS 600

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           G + EA  FI  MP+  DA +W +LL  CR H  +++ E  A++V ELEP +   YVLL+
Sbjct: 601 GIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLS 660

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           N+YA+A  W+EV ++R  +    L K  G SW+E++   + F AG +SHP A+ I   L 
Sbjct: 661 NLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLD 720

Query: 729 RLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLR 788
            L  ++K  GY P T   L +  +  KE  L  HSEK+A+AFG++   A + IR+ KNLR
Sbjct: 721 TLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLR 780

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           VC DCH   K+MSK  RREI+LRDSNRFH  KDG CSC  +W
Sbjct: 781 VCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 207/420 (49%), Gaps = 37/420 (8%)

Query: 55  ISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSL 112
           I KT+V     +   I R+ +    E+A+E+   +  +  + D  T  S++  C +L S+
Sbjct: 215 IEKTVVV----WTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSV 270

Query: 113 EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG---DLKEGRRVFNKIDNGKVFIWNLL 169
             G ++HS+    G+   D  +   LV M+        +    +VF ++    V  W  L
Sbjct: 271 RLGLQLHSLALRMGLA-SDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTAL 329

Query: 170 MHEYSKTG-NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG--NSRRVKDAHKLFDE 226
           +  Y ++G    + + LF +M +  I  +  T+S +LK  A +   +S R   AH +   
Sbjct: 330 ISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSN 389

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEM---------------------LNLGFNV 265
            +    V  N ++S Y  +G  E+   VF ++                     + +   +
Sbjct: 390 QASAHTVG-NALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVRMDVGI 448

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
             +T  +++S  A+ G L  G+ +HA +LKA F  +   +N+L+ MYS+CG L+ A R F
Sbjct: 449 SSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSF 508

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
            ++ +R+V+SWTSMI+G A+ G  + A+ LF  M+  G++P+     ++L AC+  GL+ 
Sbjct: 509 NELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVR 568

Query: 386 IGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            GK+    + +++ +   +     ++D+ A+ G + +A    N+MP+K D + W T++GA
Sbjct: 569 EGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGA 628



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 177/401 (44%), Gaps = 42/401 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++ A I  + + G  E  +  L+    +E  K +  TY SIL+ CA +   + G++VH+ 
Sbjct: 325 SWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAH 384

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK---------IDNGKVF-------- 164
           + +S       V G+ LV M+   G ++E RRVFN+         I  G+ F        
Sbjct: 385 VIKSNQASAHTV-GNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVR 443

Query: 165 --------IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
                    +  L+   +  G   +   L       G  +D +  + ++   +  G    
Sbjct: 444 MDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCG---Y 500

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++DA + F+EL DR+V+SW  MISG   +G AE+ L +F +M+  G   +  T + VLS 
Sbjct: 501 LEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSA 560

Query: 277 CANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS-VV 334
           C++ G +  G+    +          +     ++D+ ++ G +  A+    +M  ++  +
Sbjct: 561 CSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADAL 620

Query: 335 SWTSMI-AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
            W +++ A  + + +  G I     +  E  +P  Y + S L+A A  GL +    +   
Sbjct: 621 VWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADA--GLWDEVARIRSA 678

Query: 394 IKENDMQ-----SSLYVSNALMDMYAKCGSMADAESVFNQM 429
           +++N++      S + V N   +  A   S   A+ ++ ++
Sbjct: 679 MRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKL 719



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 32/279 (11%)

Query: 382 GLLEIGKDVHDYIKENDM-QSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNT 439
           G L +G+ +H  +   D+      V+N+L+ +Y++CG++A A +VF+ M  ++DIVSW  
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 440 MI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           M           G+L L   ML++   P+  T+     AC     L          L H 
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFP-HELYCLVGGVVLGLVHK 180

Query: 489 I---SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
           +     D  V +A++DM  + G L  AR +FD +  K ++ WT++I+ Y       +A+ 
Sbjct: 181 MGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC----M 601
            F D  + G EPD  +  S++ AC+  G V  G +  ++      +   L   AC    +
Sbjct: 241 LFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLA-----LRMGLASDACVSCGL 295

Query: 602 VDLLSRTGNLSEAYRF----IEMMPVAPDATIWGSLLCG 636
           VD+ +++ N+ +A  +     E MP   D   W +L+ G
Sbjct: 296 VDMYAKS-NIGQAMDYANKVFERMP-KNDVISWTALISG 332


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 232/624 (37%), Positives = 378/624 (60%), Gaps = 14/624 (2%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A ++FD+L    +  WN +I GY  N   +  L ++  M     + D  T   +L  C+ 
Sbjct: 72  ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE--KMGERSVVSWT 337
              L  GR VHA   +  F  ++   N L+ +Y+KC  L  A  VFE   + ER++VSWT
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           ++++ YA+ G    A+ +F  M +  ++PD  A+ S+L+A  C   L+ G+ +H  + + 
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
            ++    +  +L  MYAKCG +A A+ +F++M   +++ WN MI           A+D+F
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311

Query: 448 VAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M+ ++  PD +++   + ACA + +LE+ R ++ Y+ R     D  +++A++DM+ KC
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G +  AR +FD    +D++ W+ MI GYG+HG   +AI+ +  M + G+ P++V+F+ +L
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            AC+HSG+V EGW FFN M  +  I P+ +HYAC++DLL R G+L +AY  I+ MPV P 
Sbjct: 432 MACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
            T+WG+LL  C+ H  V+L E  A+ +F ++P NTG+YV L+N+YA A  W+ V ++R +
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +  +GL K+ GCSW+E++G++  F  G  SHP  ++IE  ++ +   +K  G+      +
Sbjct: 551 MKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
           L + ++ E E  LC HSE++A+A+G+++ P G  +R+TKNLR C +CH   K +SK   R
Sbjct: 611 LHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDR 670

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           EIV+RD+NRFHHFKDG CSC  +W
Sbjct: 671 EIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 231/468 (49%), Gaps = 47/468 (10%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           K++H+ +   G+    G L +KL+    + GD+   R+VF+ +   ++F WN ++  YS+
Sbjct: 38  KQIHARLLVLGLQFS-GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---------------------------- 207
             +F+++L ++  MQ   ++ DS+TF  +LK                             
Sbjct: 97  NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156

Query: 208 ----LAVVGNSRRVKDAHKLFD--ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
               +A+    RR+  A  +F+   L +R +VSW  ++S Y  NG   + LE+F +M  +
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               D   +V+VL+       L  GR++HA  +K     E     +L  MY+KCG +  A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F+KM   +++ W +MI+GYA+ G    AI +F  M+ + + PD  +ITS + ACA  
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
           G LE  + +++Y+  +D +  +++S+AL+DM+AKCGS+  A  VF++   +D+V W+ MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 442 ----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      A+ L+ AM +    P+ VT   +L AC     +  G      +  H I+
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKIN 456

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
             +     ++D+  + G L  A  +   +P +  ++ W  +++    H
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 180/352 (51%), Gaps = 15/352 (4%)

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L+   S  GD+  A +VF+ +    +  W ++I GY+R   F  A+ ++  M    + PD
Sbjct: 59  LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
            +    +L AC+    L++G+ VH  +      + ++V N L+ +YAKC  +  A +VF 
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178

Query: 428 QMPV--KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAAL 474
            +P+  + IVSW  ++           AL++F  M + + +PD V +  +L A   L  L
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           ++GR IH  +++ G+  + ++  ++  MY KCG +  A+ LFD + + +LI W  MI+GY
Sbjct: 239 KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
             +G+  +AI  F++M    + PD +S  S + AC+  G +++    +  +    +    
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG-RSDYRDD 357

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
           +   + ++D+ ++ G++ E  R +    +  D  +W +++ G  +H   + A
Sbjct: 358 VFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 197/415 (47%), Gaps = 38/415 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  +    + + A+ +  + + +++  D+ T+  +L+ C+ L  L+ G+ VH+ + 
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN--KIDNGKVFIWNLLMHEYSKTGNFKE 181
             G   D  V  + L+ ++  C  L   R VF    +    +  W  ++  Y++ G   E
Sbjct: 147 RLGFDADVFV-QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSR----------------------- 215
           +L +F +M+ + +  D      VL    CL  +   R                       
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265

Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                 +V  A  LFD++   +++ WN MISGY  NG A + +++F EM+N     D  +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           + + +S CA  G+L   R+++ +  ++ +  ++  ++ L+DM++KCG ++GA  VF++  
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           +R VV W++MI GY   G    AI L+R M R G+ P+      +L AC   G++  G  
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
             + + ++ +         ++D+  + G +  A  V   MPV+  V+ W  ++ A
Sbjct: 446 FFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 17/263 (6%)

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
           K +H  +    +Q S ++   L+   +  G +  A  VF+ +P   I  WN +I      
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 442 ----GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL ++  M L    PD  T   +L AC+ L+ L+ GR +H  + R G  AD  V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 497 NAIVDMYVKCGVLVLARSLFD--MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           N ++ +Y KC  L  AR++F+   +P + ++SWT +++ Y  +G   +A+  F+ MR+  
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           ++PD V+ +SVL A +    + +G     ++++    IEP L     +  + ++ G ++ 
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQVAT 275

Query: 614 AYRFIEMMPVAPDATIWGSLLCG 636
           A    + M  +P+  +W +++ G
Sbjct: 276 AKILFDKMK-SPNLILWNAMISG 297



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 141/315 (44%), Gaps = 40/315 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK----TYCSILQLCADLKSLEDGKKVHS 120
           ++ A +  + + G   +A+E+   S+  K+D K       S+L     L+ L+ G+ +H+
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIF--SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            + + G+ I+  +L S L  M+  CG +   + +F+K+ +  + +WN ++  Y+K G  +
Sbjct: 247 SVVKMGLEIEPDLLIS-LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------------------------ 216
           E++ +F +M +  +  D+ + +  +   A VG+  +                        
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365

Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   V+ A  +FD   DRDVV W+ MI GY  +G A + + +++ M   G + +  
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T + +L  C + G +  G            + +      ++D+  + G LD A  V + M
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485

Query: 329 G-ERSVVSWTSMIAG 342
             +  V  W ++++ 
Sbjct: 486 PVQPGVTVWGALLSA 500



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/223 (20%), Positives = 99/223 (44%), Gaps = 7/223 (3%)

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           ++IH  +L  G+     +   ++      G +  AR +FD +P   +  W  +I GY  +
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
               DA+  +++M+ A + PD  +F  +L ACS    +  G RF +   +    +  +  
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG-RFVHAQVFRLGFDADVFV 156

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATI--WGSLLCGCRIHHEVKLAEKVAEHV-- 653
              ++ L ++   L  A    E +P+ P+ TI  W +++     + E   A ++   +  
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPL-PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
            +++PD      +L N +   +  ++ + +   + + GL+  P
Sbjct: 216 MDVKPDWVALVSVL-NAFTCLQDLKQGRSIHASVVKMGLEIEP 257


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 269/774 (34%), Positives = 427/774 (55%), Gaps = 49/774 (6%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L++C  +     GK++H +    G    D  +G+ LV M++    + +GR+VF  +   
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKR 168

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN---SRRV- 217
            V  W  L+  Y + G   + + LF +M++ G+  +S TF+ VL  +A  G     RRV 
Sbjct: 169 NVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVH 228

Query: 218 ----------------------------KDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                       ++A  +F  +  RD+VSWN +++G + NG   
Sbjct: 229 AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDL 288

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L++F +  +    +  +T  TV+  CAN   L   R +H+  LK  F    +    L+
Sbjct: 289 EALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALM 348

Query: 310 DMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           D YSK G L  A+ +F  M G ++VVSWT+MI G  + G    A  LF  M  +G+ P+ 
Sbjct: 349 DAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPND 408

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           +  ++IL A     +  +   +H  + + + + +  V  AL+  Y+K  +  +A S+F  
Sbjct: 409 FTYSTILTA----SVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKM 464

Query: 429 MPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACAS-LAALER 476
           +  KD+VSW+ M+          GA ++F+ M +   +P+  T++ ++ ACAS  A ++ 
Sbjct: 465 IDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDL 524

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           GR+ H   ++H       V++A+V MY + G +  A+ +F+    +DL+SW  M++GY  
Sbjct: 525 GRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQ 584

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG+   A+  F  M   GIE D V+F+SV+  C+H+GLV+EG R+F+ M  +  I P +E
Sbjct: 585 HGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTME 644

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HYACMVDL SR G L EA   IE M       +W +LL  C++H  V+L +  AE +  L
Sbjct: 645 HYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSL 704

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           EP ++  YVLL+N+Y+ A KW+E  ++R+ +  + +KK  GCSWI+IK KV+ F+A   S
Sbjct: 705 EPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKS 764

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP +++I + L+ +  ++K+EGY P T +AL    E +KE  L  HSE+LA+AFG++  P
Sbjct: 765 HPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATP 824

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            G  + + KNLRVCGDCH + K +SK   REIV+RD +RFHHF  G CSC  FW
Sbjct: 825 PGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 202/402 (50%), Gaps = 37/402 (9%)

Query: 77  GNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G+  +A+++ + S  S   +   TY ++++LCA++K L   +++HS + + G      V+
Sbjct: 285 GHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVM 344

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGK-VFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
            + L+  +   G L     +F  +   + V  W  +++   + G+   +  LF +M+  G
Sbjct: 345 -TALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDG 403

Query: 194 IAADSYTFSCVL--------------------KCLAVVGNSR--------RVKDAHKLFD 225
           +A + +T+S +L                    +C ++VG +           ++A  +F 
Sbjct: 404 VAPNDFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFK 463

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA-LM 284
            +  +DVVSW+ M++ Y   G ++    +F +M   G   +  T+ +V+  CA+  A + 
Sbjct: 464 MIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVD 523

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            GR  HA ++K      +  ++ L+ MY++ G ++ A  +FE+  +R +VSW SM++GYA
Sbjct: 524 LGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYA 583

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSL 403
           + G    A+ +FR M  EGIE D     S++  CA  GL+E G+   D + ++  +  ++
Sbjct: 584 QHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTM 643

Query: 404 YVSNALMDMYAKCGSMADAESVFNQM--PVKDIVSWNTMIGA 443
                ++D+Y++ G + +A S+   M  P   +V W T++GA
Sbjct: 644 EHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMV-WRTLLGA 684



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 114/240 (47%), Gaps = 10/240 (4%)

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGIS-ADRNVANAIVDMYVKCGVLVLARSLF 516
           G  +  +L  C S+     G+++HG  +R G    D  V  ++VDMY+K   +V  R +F
Sbjct: 103 GGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVF 162

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           + +P +++++WT ++ GY   G   D +  F  MR  G+ P+ V+F SVL   +  G+VD
Sbjct: 163 EAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVD 222

Query: 577 EGWRFF-NMMRYECNIEPKLEHYAC--MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
            G R     +++ C        + C  ++++ ++ G + EA R +       D   W +L
Sbjct: 223 LGRRVHAQSVKFGCCSTV----FVCNSLMNMYAKCGLVEEA-RVVFCGMETRDMVSWNTL 277

Query: 634 LCGCRIH-HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           + G  ++ H+++  +   +    +       Y  +  + A  ++    ++L   + +RG 
Sbjct: 278 MAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGF 337


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 263/745 (35%), Positives = 405/745 (54%), Gaps = 84/745 (11%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           V++ N LM+ Y+KTG   ++  LF +M        +++++ +L   A  G   +++ AH+
Sbjct: 10  VYLMNNLMNLYAKTGFHLDAHDLFNEMP----VKTTFSWNTILSGYAKQG---KLEKAHQ 62

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +FD +  RD VSW  +I GY   G  E  +++F +M+         T+  VL+ CA  G+
Sbjct: 63  VFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGS 122

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL------------------------ 318
              G+ VH+F +K      +   N+LL+MY+K GDL                        
Sbjct: 123 RGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISL 182

Query: 319 -------DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYA 370
                  D A+  FE + ER +VSW SMIAG  + G  + A++ F  ++++  ++PD ++
Sbjct: 183 HMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFS 242

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG------------- 417
           + S L ACA    L  GK +H YI      +S  V NAL+ MYAK G             
Sbjct: 243 LASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSG 302

Query: 418 --------------------SMADAESVFNQMPVKDIVSWNTMI----------GALDLF 447
                                +  A  +FN +   D+V+W  MI           A+++F
Sbjct: 303 ISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVF 362

Query: 448 VAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M+ +   P+  T+A +L A +S+ +L  G++IH   +R G +   +V NA+  MY K 
Sbjct: 363 KTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKA 422

Query: 507 GVLVLARSLFDMI-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           G +  AR +F+++   +D +SWT MI     HG G +AI  F  M   GI+PD ++++ V
Sbjct: 423 GSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGV 482

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L AC+H GLV++G  +F++M+    I+P L HYACMVDL  R G L EAY+F+E MP+ P
Sbjct: 483 LSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEP 542

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
           D   WGSLL  C+++  V LA+  AE +  +EP+N+G Y  LANVY+   KW++  K+R+
Sbjct: 543 DVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRK 602

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +  RG+KK  G SW++I+ K ++F      HP   +I  ++ ++  E+K+ G+ P T  
Sbjct: 603 LMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTES 662

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L + +   K+  L  HSEKLA+AFGI++ P   T+R+ KNLRVC DCH   KF+SK   
Sbjct: 663 VLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVD 722

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REI++RD+ RFHHFKDG CSC+ +W
Sbjct: 723 REIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 74/244 (30%)

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------------------- 442
           S+Y+ N LM++YAK G   DA  +FN+MPVK   SWNT++                    
Sbjct: 9   SVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIP 68

Query: 443 ----------------------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGRE 479
                                 A+ +FV M+++   P   T+  +L +CA+  +   G++
Sbjct: 69  VRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKK 128

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD---------------------- 517
           +H ++++ G+ A   VAN++++MY K G L +A+ +FD                      
Sbjct: 129 VHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGR 188

Query: 518 ---------MIPAKDLISWTIMIAGYGMHGFGCDAIATFND-MRQAGIEPDEVSFISVLY 567
                    ++  +D++SW  MIAG   HGF  +A+  F+  ++   ++PD  S  S L 
Sbjct: 189 VDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALS 248

Query: 568 ACSH 571
           AC++
Sbjct: 249 ACAN 252



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 136/318 (42%), Gaps = 71/318 (22%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHS-------------------------------- 120
           K D  +  S L  CA+L+ L  GK++H                                 
Sbjct: 237 KPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARR 296

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           II +SGI   D +  + L+  +V  GD+   R++FN + +  V  W  ++  Y + G   
Sbjct: 297 IIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNN 356

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR- 215
           +++ +FK M S G   +S+T + +L   +                         VGN+  
Sbjct: 357 DAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALT 416

Query: 216 -------RVKDAHKLFDEL-SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                   +  A K+F+ L  +RD VSW  MI     +G+ E+ +E+F++ML LG   D 
Sbjct: 417 TMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDH 476

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSK---EISFNNTLLDMYSKCGDLDGAIRV 324
            T V VLS C + G +  GR+   F L     K    +S    ++D++ + G L  A + 
Sbjct: 477 ITYVGVLSACTHGGLVEQGRSY--FDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKF 534

Query: 325 FEKMG-ERSVVSWTSMIA 341
            E M  E  V++W S+++
Sbjct: 535 VENMPMEPDVIAWGSLLS 552



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 148/346 (42%), Gaps = 36/346 (10%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           + A I  + + G    A+EV  +  SE  + ++ T  ++L   + + SL  GK++H+   
Sbjct: 342 WTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAI 401

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFIWNLLMHEYSKTGNFKES 182
            SG  +   V G+ L  M+   G +   R+VFN +  N     W  ++   ++ G  +E+
Sbjct: 402 RSGEALSPSV-GNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEA 460

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCL---AVVGNSRR----VKDAHKLFDELSDRDVVSW 235
           + LF++M +LGI  D  T+  VL       +V   R     +K+ HK+   LS      +
Sbjct: 461 IELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLS-----HY 515

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
            CM+  +   G+ +   E +K + N+    D+    ++LS C     +   + V A  L 
Sbjct: 516 ACMVDLFGRAGLLQ---EAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAK-VAAERLL 571

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV-----VSWTSMIAGYAREGVFD 350
                     + L ++YS CG  D A ++ + M  R V     +SW  +       GV D
Sbjct: 572 LIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVED 631

Query: 351 G-----------AIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           G             ++++ + + G  PD  ++   L     D +L 
Sbjct: 632 GLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILR 677


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 277/775 (35%), Positives = 414/775 (53%), Gaps = 82/775 (10%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y S+L+LC + ++    KK+H +I ++ I   +  L + L+  +   G+L     VF+ I
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKT-IKQPETFLSNNLITAYYKLGNLAYAHHVFDHI 66

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
               +F WN ++  YSK G       L  +MQ                            
Sbjct: 67  PQPNLFSWNTILSVYSKLG-------LLSQMQ---------------------------- 91

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGC 277
              ++F+ +  RD VSWN  ISGY   G     + V+K ML +   N++  T  T+L  C
Sbjct: 92  ---QIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILC 148

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV--- 334
           +    +  GR ++   LK  F  ++   + L+DMY+K G +  A R F++M ER+VV   
Sbjct: 149 SKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCN 208

Query: 335 ----------------------------SWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
                                       SWT MI G  + G+   A+ +FR M   G   
Sbjct: 209 TMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAM 268

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D +   S+L AC     L  GK +H Y+   D + +++V +AL+DMY+KC S+  AE+VF
Sbjct: 269 DQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVF 328

Query: 427 NQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALE 475
            +MP K+++SW  M+           A+ +F  M +N  EPD  T+  ++ +CA+LA+LE
Sbjct: 329 KRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLE 388

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
            G + H   L  G+ +   V+NA++ +Y KCG    +  LF  +  +D +SWT ++AGY 
Sbjct: 389 EGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYA 448

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
             G   + I  F  M   G++PD V+FI VL ACS +GLV++G ++F  M  E  I P +
Sbjct: 449 QFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIV 508

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           +H  C++DLL R G L EA  FI  MP  PD   W +LL  CR+H ++++ +  A+ +  
Sbjct: 509 DHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIA 568

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           LEP N   YVLL+++YA   KW++V +LR  +  + ++K PG SWI+ KGKV++F A   
Sbjct: 569 LEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQ 628

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
           S P   +I + L++L  +M  EGY P     L + +E EK   L  HSEKLA+AFG++ +
Sbjct: 629 SSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFV 688

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           P G  IRV KNLRVCGDCH   KF+SK  +REI++RD+ RFH FKDG CSC  FW
Sbjct: 689 PPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 148/367 (40%), Gaps = 84/367 (22%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D  T+ S+L  C  L +L +GK++H+ +  +    D+  +GS LV M+  C  +K    
Sbjct: 268 MDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHK-DNVFVGSALVDMYSKCRSIKSAET 326

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------- 206
           VF ++    V  W  ++  Y + G  +E++ +F +MQ  G+  D +T   V+        
Sbjct: 327 VFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLAS 386

Query: 207 --------CLAVV-----------------GNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
                   C A+V                 G     +++H+LF E++ RD VSW  +++G
Sbjct: 387 LEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAG 446

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y   G A + + +F+ ML  G   D  T + VLS C                        
Sbjct: 447 YAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSAC------------------------ 482

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKM----GERSVVSW-TSMIAGYAREGVFDGAIRLF 356
                      S+ G ++  ++ FE M    G   +V   T +I    R G  + A    
Sbjct: 483 -----------SRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFI 531

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ--------SSLYVSNA 408
             M      PDV    ++L +C   G +EIGK   D +   + Q        SSLY S  
Sbjct: 532 NNM---PCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKG 588

Query: 409 LMDMYAK 415
             D  A+
Sbjct: 589 KWDKVAQ 595



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 145/335 (43%), Gaps = 34/335 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A +  + + G  E+A+++ +  +++ +  D  T  S++  CA+L SLE+G + H   
Sbjct: 338 SWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRA 397

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG+ I    + + L+ ++  CG  +   R+F +++      W  L+  Y++ G   E+
Sbjct: 398 LVSGL-ISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANET 456

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD-----VVSWNC 237
           + LF++M + G+  D  TF  VL   +  G    V+   + F+ +         V    C
Sbjct: 457 IGLFERMLAHGLKPDGVTFIGVLSACSRAG---LVEKGLQYFESMIKEHGIMPIVDHCTC 513

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I      G  E+         N+  + D+    T+LS C   G +  G+   A +L A 
Sbjct: 514 IIDLLGRAGRLEEARNFIN---NMPCHPDVVGWATLLSSCRVHGDMEIGKWA-ADSLIAL 569

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV-----VSW------TSMIAGYARE 346
             +  +    L  +Y+  G  D   ++   M ++ V      SW        + +   + 
Sbjct: 570 EPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQS 629

Query: 347 GVFDGAI-----RLFRGMVREGIEPDVYAITSILH 376
             F G I     +L   M+ EG  PD   ++S+LH
Sbjct: 630 SPFLGQIYAELEKLNYKMIEEGYVPD---MSSVLH 661


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 255/672 (37%), Positives = 382/672 (56%), Gaps = 46/672 (6%)

Query: 205 LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
           L+ + V  N      A +LFD +   D  + + +IS    +G++ + ++++  +   G  
Sbjct: 16  LRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIK 75

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D+   +     CA  G  +  + VH  A +     ++   N L+  Y KC  ++GA RV
Sbjct: 76  PDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRV 135

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F+ +  R VVSWTS+ + Y + G     + +FR M   G++P+   ++SIL ACA    L
Sbjct: 136 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 195

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA- 443
           + GK++H +   + M  +L+V +AL+ +YAKC S+ +A  VF+ MP +D+VSWN ++ A 
Sbjct: 196 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 255

Query: 444 ---------LDLFVAMLQN------------------------------------FEPDG 458
                      LF+ M ++                                    F+P+ 
Sbjct: 256 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 315

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           +T++ ILPAC+    L  G+EIH Y+ RH    D     A++ MY KCG L L+R++FDM
Sbjct: 316 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 375

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +  KD+++W  MI    MHG G +A+  F+ M  + ++P+ V+F  VL  CSHS LV+EG
Sbjct: 376 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 435

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
            + FN M  +  +EP   HY+C+VD+ SR G L+EAY+FI+ MP+ P A+ WG+LL  CR
Sbjct: 436 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACR 495

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
           ++  V+LA+  A+ +FE+EP+N G YV L N+   A+ W E  ++R  +  RG+ K PGC
Sbjct: 496 VYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGC 555

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           SW+++  KV+ FV G  S+  + KI + L  L  +MK  GY P T Y L + D+ EK  +
Sbjct: 556 SWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAES 615

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
           LC HSEKLA+AFGILNL    TIRV KNLR+CGDCH   K+MSK     IV+RDS RFHH
Sbjct: 616 LCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHH 675

Query: 819 FKDGRCSCRGFW 830
           FK+G CSC+  W
Sbjct: 676 FKNGNCSCKDLW 687



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 188/419 (44%), Gaps = 86/419 (20%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           VF+ N L+H Y K                              KC         V+ A +
Sbjct: 113 VFVGNALIHAYGKC-----------------------------KC---------VEGARR 134

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +FD+L  RDVVSW  + S Y+  G   KG++VF+EM   G   +  T+ ++L  CA    
Sbjct: 135 VFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKD 194

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G+ +H FA++      +   + L+ +Y+KC  +  A  VF+ M  R VVSW  ++  
Sbjct: 195 LKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTA 254

Query: 343 Y----------------AREGV-------------------FDGAIRLFRGMVREGIEPD 367
           Y                +R+GV                    + A+ +FR M + G +P+
Sbjct: 255 YFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPN 314

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
              I+SIL AC+    L +GK++H Y+  +     L  + AL+ MYAKCG +  + +VF+
Sbjct: 315 EITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFD 374

Query: 428 QMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALER 476
            M  KD+V+WNTMI           AL LF  M L   +P+ VT   +L  C+    +E 
Sbjct: 375 MMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEE 434

Query: 477 GREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAG 533
           G +I   + R H +  D N  + +VD+Y + G L  A      +P +   S W  ++A 
Sbjct: 435 GVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 493



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 179/383 (46%), Gaps = 47/383 (12%)

Query: 73  FCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           + + G   K M+V      S  K +  T  SIL  CA+LK L+ GK++H      G+V++
Sbjct: 154 YVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVN 213

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
             V  S LV ++  C  ++E R VF+ + +  V  WN ++  Y K   +++   LF KM 
Sbjct: 214 LFVC-SALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMS 272

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
             G+ AD  T                                  WN +I G + NG +E+
Sbjct: 273 RDGVRADEAT----------------------------------WNAVIGGCMENGRSEE 298

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            +E+F++M  +GF  +  T+ ++L  C+    L  G+ +H +  +     +++    LL 
Sbjct: 299 AVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLY 358

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MY+KCGDL+ +  VF+ M  + VV+W +MI   A  G    A+ LF  M+   ++P+   
Sbjct: 359 MYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVT 418

Query: 371 ITSILHACACDGLLEIGKDV-----HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
            T +L  C+   L+E G  +      D++ E D        + ++D+Y++ G + +A   
Sbjct: 419 FTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANH----YSCVVDIYSRAGRLNEAYKF 474

Query: 426 FNQMPVKDIVS-WNTMIGALDLF 447
              MP++   S W  ++ A  ++
Sbjct: 475 IQGMPMEPTASAWGALLAACRVY 497



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 11/200 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA IG   E G  E+A+E+    +K   K +  T  SIL  C+  ++L  GK++H  + 
Sbjct: 283 WNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVF 342

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
               V  D    + L++M+  CGDL   R VF+ +    V  WN ++   +  GN KE+L
Sbjct: 343 RHWKV-GDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEAL 401

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLF-----DELSDRDVVSWNCM 238
           +LF KM    +  +S TF+ VL   +   +SR V++  ++F     D L + D   ++C+
Sbjct: 402 FLFDKMLLSRVQPNSVTFTGVLSGCS---HSRLVEEGVQIFNSMGRDHLVEPDANHYSCV 458

Query: 239 ISGYIANGVAEKGLEVFKEM 258
           +  Y   G   +  +  + M
Sbjct: 459 VDIYSRAGRLNEAYKFIQGM 478


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/781 (33%), Positives = 426/781 (54%), Gaps = 44/781 (5%)

Query: 94   IDTKTYCSILQLCADLKSLEDGKKVHSIICESG-IVIDDGVLGSKLVFMFVTCGDLKEGR 152
            +D+  Y  +LQ C        G+ VH  +  SG +   D    + L+ M+   G      
Sbjct: 426  VDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAH 485

Query: 153  RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------ 206
            RVF+ +    +  +  L+  ++  G F+E+  LF++++  G   + +  + VLK      
Sbjct: 486  RVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMD 545

Query: 207  ----------CLAVVGNSRR----------------VKDAHKLFDELSDRDVVSWNCMIS 240
                      C   +G+ R                 V DA ++FD +  +D V+W  M+S
Sbjct: 546  TLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVS 605

Query: 241  GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
             Y  N   E  L++F +M      ++   + +VL       +++ G+ +HA ++K  +  
Sbjct: 606  CYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDT 665

Query: 301  EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            E      LLDMY+KCG+++ A   FE +    V+ W+ MI+ YA+    + A  LF  M+
Sbjct: 666  ERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMM 725

Query: 361  REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
            R  + P+ ++++S+L ACA   LL++GK +H++  +   +S L+V NAL+D+YAKC  M 
Sbjct: 726  RSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDME 785

Query: 421  DAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFEPDG-VTMACILPACA 469
             +  +F+ +   + VSWNT+I           AL +F  M     P   VT + +L ACA
Sbjct: 786  SSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACA 845

Query: 470  SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            S A++    ++H  I +   ++D  V+N+++D Y KCG +  AR +F+ +   DL+SW  
Sbjct: 846  STASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNA 905

Query: 530  MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
            +I+GY +HG    A   F+ M +  I+ ++++F+++L  C  +GLV +G   F+ MR + 
Sbjct: 906  IISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDH 965

Query: 590  NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
             IEP +EHY C+V LL R G L++A  FI  +P AP A +W +LL  C +H  V+L    
Sbjct: 966  GIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFS 1025

Query: 650  AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
            AE V E+EP +   YVLL+N+Y+ A   ++V   R+ +   G++K PG SW+EIKG+V+ 
Sbjct: 1026 AEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHA 1085

Query: 710  FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
            F  G   HP  + I ++L+ L L+  REGY P T   L + +E +K   L  HSE+LA+A
Sbjct: 1086 FSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALA 1145

Query: 770  FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
            +G++  P G  IR+ KNLR C DCH + K +SK  ++EI++RD NRFHHF++G CSC  +
Sbjct: 1146 YGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDY 1205

Query: 830  W 830
            W
Sbjct: 1206 W 1206


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/789 (33%), Positives = 422/789 (53%), Gaps = 44/789 (5%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID-DGVLGSKLVFMFVT 144
           L S    K+D+      LQ C        G+ VH+ + + G V   D    + L+  +  
Sbjct: 35  LASLALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAK 94

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
            G L   RR+F+ +       +  LM  Y+  G F+E+L LF+++Q  G   + +  + +
Sbjct: 95  LGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTI 154

Query: 205 LK----------------CLAVVGNSRR------VKDAHKL----------FDELSDRDV 232
           LK                C   +G+ R       + DA+ L          FD +  +D 
Sbjct: 155 LKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDA 214

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           V+W  M+S Y  N + E  L  F +M   GF  +   + + L       + + G+ +H  
Sbjct: 215 VTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGC 274

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
           ++K  +  E      LLDMY+KCGD++ A  +FE +    V+ W+ +I+ YA+    + A
Sbjct: 275 SVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQA 334

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
             +F  M+R  + P+ ++++ +L ACA    LE+G+ +H+   +   +S L+V NALMDM
Sbjct: 335 FEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDM 394

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTM 461
           YAKC +M ++  +F+ +   + VSWNT+I           AL +F  M   +     VT 
Sbjct: 395 YAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTF 454

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
           + +L ACA+ ++++   +IH  I +   + D  V N+++D Y KCG +  A  +F+ I  
Sbjct: 455 SSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVE 514

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
            D++SW  +I+ Y +HG   +A+  F+ M ++ I+ ++V+F+S+L  C  +GLV++G   
Sbjct: 515 CDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWL 574

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           FN M  +  I+P +EHY C+V LL R G L++A +FI  +P  P   +W +LL  C +H 
Sbjct: 575 FNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHK 634

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
            V L    AE V ++EP +   YVLL+N+YA A   +EV   R+ +   G+KK  G SW+
Sbjct: 635 NVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWV 694

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCG 761
           EIKG+V+ F  G + HP  + I ++L+ L L+  REGY P     L + DE EK   L  
Sbjct: 695 EIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWV 754

Query: 762 HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKD 821
           HSE+LA+A+G+   P G  IR+ KNLR C DCH M K +SK  +REI++RD NRFHHF++
Sbjct: 755 HSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEE 814

Query: 822 GRCSCRGFW 830
           G CSC  +W
Sbjct: 815 GICSCGDYW 823


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 294/822 (35%), Positives = 416/822 (50%), Gaps = 128/822 (15%)

Query: 99  YCSILQLCA--DLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           Y   LQLC+  D  S    + VH+ +  SG     G   ++L+ M+    +L   R++F 
Sbjct: 14  YAEKLQLCSPQDPASFSLARAVHAHMIASGFK-PRGHFLNRLLEMYCKSSNLVYARQLFE 72

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           +I N        L+  Y   GN +           LG                     R 
Sbjct: 73  EIPNPDAIARTTLITAYCALGNLE-----------LG---------------------RE 100

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS- 275
           + +   L+     RD V +N MI+GY  NG     LE+F+ M    F  D  T  +VLS 
Sbjct: 101 IFNGTPLYM----RDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA 156

Query: 276 -----------GCANCGALMFGRA-VHAFALKACFS------------------------ 299
                      G  +C  +  G   V +  L A  S                        
Sbjct: 157 LVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFD 216

Query: 300 -----KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
                 E+++  T++  Y +  DL+GA  VFE M E    +W +MI+GY   G F  A+ 
Sbjct: 217 EMPKRDELTWT-TMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALT 275

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS----LYVSNALM 410
           L R M   GI+ D    T+I+ ACA  G  ++GK VH YI +N++  +    L VSNAL+
Sbjct: 276 LCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALI 335

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA--------------------------- 443
            +Y K   + +A  +F  MPV++I++WN ++                             
Sbjct: 336 TLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTV 395

Query: 444 --------------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
                         L LF  M L  FEP     A  L AC+ L ALE GR++H  ++  G
Sbjct: 396 MISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLG 455

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
             +  +V NA++ MY KCGV+  A S+F  +P+ DL+SW  MIA  G HG G  AI  F+
Sbjct: 456 YESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFD 515

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            M + G+ PD ++F++VL ACSH+GLV++G  +FN M     I P  +HYA MVDL  R 
Sbjct: 516 QMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRA 575

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           G  S A   I+ MP  P A +W +LL GCRIH  + L  + AE +F+L P N G YVLL+
Sbjct: 576 GMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLS 635

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           N+YA+  +W EV K+R+ +  + ++K P CSWIE++ KV++F+     HP    +   L+
Sbjct: 636 NIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLE 695

Query: 729 RLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLR 788
           +L LEMK+ GY P T++ L + +  +KE AL  HSEKLA+ FGI+ LP G T+RV KN+R
Sbjct: 696 QLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIR 755

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +CGDCH   KFMSK ARREI++RD  RFHHFK+G CSCR +W
Sbjct: 756 ICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 171/373 (45%), Gaps = 44/373 (11%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSE--KSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  +   G  ++A+ +         + D  TY +I+  CA++ S + GK+VH+ I 
Sbjct: 257 WNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYIL 316

Query: 124 ESGIVIDDGV---LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           ++ +  +      + + L+ ++     + E R++F  +    +  WN ++  Y   G   
Sbjct: 317 KNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAG--- 373

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                              R+++A   F+E+  +++++   MIS
Sbjct: 374 -----------------------------------RMEEAKSFFEEMPVKNLLTLTVMIS 398

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G   NG  ++GL++FK+M   GF          L+ C+  GAL  GR +HA  +   +  
Sbjct: 399 GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYES 458

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            +S  N ++ MY+KCG ++ A  VF  M    +VSW SMIA   + G    AI LF  M+
Sbjct: 459 SLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQML 518

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM-DMYAKCGSM 419
           +EG+ PD     ++L AC+  GL+E G+   + + E+   +      A M D++ + G  
Sbjct: 519 KEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMF 578

Query: 420 ADAESVFNQMPVK 432
           + A  V + MP K
Sbjct: 579 SYARIVIDSMPSK 591


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 287/806 (35%), Positives = 438/806 (54%), Gaps = 52/806 (6%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
            ++NA I    E    E  +E+  +  ++++     T  S+      L  +   K++H   
Sbjct: 265  SWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFA 324

Query: 123  CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             + G  ID     S L+ M+ + G + +  ++F++++      W  ++  Y K G   ++
Sbjct: 325  VKRGFAIDVAFCNS-LIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKA 383

Query: 183  LYLFKKMQSLGIAADSYTFSCV---------------LKCLA---------VVGN----- 213
            L ++  M+   +  D  T +                 L  LA         VV N     
Sbjct: 384  LEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEM 443

Query: 214  ---SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
               S+ +  A ++F  ++++DVVSW+ MI+G+  N  +   L  F+ ML      +  T 
Sbjct: 444  YAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLG-HVKPNSVTF 502

Query: 271  VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +  LS CA  GAL  G+ +HA+ L+     E    N LLD+Y KCG    A   F    E
Sbjct: 503  IAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSE 562

Query: 331  RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
            + VVSW  M++G+   G+ D A+ LF  M+   +        S L ACAC G L++G  +
Sbjct: 563  KDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALAACACLGRLDVGIKL 620

Query: 391  HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
            H+  +       + V+NAL++MYAK   +  A  VF  M  KD+VSW++MI         
Sbjct: 621  HELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRS 680

Query: 443  --ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
              AL  F  ML + +P+ VT    L ACA+  AL  G+EIH Y+LR GI ++  V NA++
Sbjct: 681  FDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALL 740

Query: 501  DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
            D+YVKCG    A + F +   KD++SW IM++G+  HG G  A++ FN M + G  PDEV
Sbjct: 741  DLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEV 800

Query: 561  SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
            +F+ ++ ACS +G+V +GW  F+    + +I P L+HYACMVDLLSR G L+EAY  I  
Sbjct: 801  TFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINR 859

Query: 621  MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
            MP+ PDA +WG+LL GCRIH  V+L E  A+ + ELEP++  Y+VLL ++Y +A KW +V
Sbjct: 860  MPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQV 919

Query: 681  KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
             ++R+ +  +GL+++ GCSW+E+KG  + F+    SHP  K+I  +L  +   MK  G+ 
Sbjct: 920  ARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFA 979

Query: 741  PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
            P      +   E+ ++  LCGHSE+LA+AFG++N   G TI VTKN   C  CH + K +
Sbjct: 980  PVES---LEDKEVSEDDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAI 1036

Query: 801  SKTARREIVLRDSNRFHHFKDGRCSC 826
            S+  RREI +RD+ + H FKDG CSC
Sbjct: 1037 SEIVRREITVRDTKQLHCFKDGDCSC 1062



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 191/627 (30%), Positives = 307/627 (48%), Gaps = 66/627 (10%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           +A +   C  G L +A+ +L SS +   D   Y ++ +LC   ++++ G +     C   
Sbjct: 68  SAALRALCSHGQLAQALWLLESSPEPP-DEGAYVALFRLCEWRRAVDAGMRA----CARA 122

Query: 127 IVIDDGV---LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
                     LG+ ++ M V  G++    RVF K+    VF WN+++  Y K G  +E+L
Sbjct: 123 DAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEAL 182

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH---------------------- 221
            L+ +M   G+  D YTF CVL+    + + R  ++ H                      
Sbjct: 183 DLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMY 242

Query: 222 ----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                     K+FD ++  D +SWN MI+G+  N   E GLE+F  ML      +L T+ 
Sbjct: 243 AKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTIT 302

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +V         + F + +H FA+K  F+ +++F N+L+ MY+  G +  A ++F +M  +
Sbjct: 303 SVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK 362

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             +SWT+MI+GY + G  D A+ ++  M    + PD   I S L ACAC G L++G  +H
Sbjct: 363 DAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLH 422

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
           +  +       + V+NAL++MYAK   +  A  VF  M  KD+VSW++MI          
Sbjct: 423 ELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSF 482

Query: 443 -ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
            AL  F  ML + +P+ VT    L ACA+  AL  G+EIH Y+LR GI ++  V NA++D
Sbjct: 483 DALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLD 542

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           +YVKCG    A + F +   KD++SW IM++G+  HG G  A++ FN M    +    + 
Sbjct: 543 LYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMG 600

Query: 562 FISVLYACSHSGLVDEGWRFFNM------MRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
             S L AC+  G +D G +   +      +RY       LE YA       ++ ++ +A 
Sbjct: 601 ACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYA-------KSKHIDKAI 653

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHE 642
              + M    D   W S++ G   +H 
Sbjct: 654 EVFKFM-AEKDVVSWSSMIAGFCFNHR 679



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 194/672 (28%), Positives = 310/672 (46%), Gaps = 54/672 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +G + +VG LE+A+++ Y       + D  T+  +L+ C  +     G++VH+ +
Sbjct: 164 SWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHV 223

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G   +  VL + LV M+  CGD+   R+VF+ +       WN ++  + +    +  
Sbjct: 224 LRFGFGDEVDVLNA-LVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAG 282

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSR------------------------ 215
           L LF  M    +  +  T + V      L+ VG ++                        
Sbjct: 283 LELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQM 342

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R+ DA K+F  +  +D +SW  MISGY  NG  +K LEV+  M     N D  T+
Sbjct: 343 YTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTI 402

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + L+ CA  G L  G  +H  A    F + +   N LL+MY+K   +D AI VF+ M E
Sbjct: 403 ASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAE 462

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVSW+SMIAG+        A+  FR M+   ++P+     + L ACA  G L  GK++
Sbjct: 463 KDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEI 521

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H Y+    + S  YV NAL+D+Y KCG  + A + F+    KD+VSWN M+         
Sbjct: 522 HAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLG 581

Query: 443 --ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             AL LF  M+       +     L ACA L  L+ G ++H      G      VANA++
Sbjct: 582 DIALSLFNQMMYT-SLGRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALL 640

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           +MY K   +  A  +F  +  KD++SW+ MIAG+  +    DA+  F  M    ++P+ V
Sbjct: 641 EMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSV 699

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +FI+ L AC+ +G +  G +  +     C I  +      ++DL  + G  S A+    +
Sbjct: 700 TFIAALSACAATGALRSG-KEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSV 758

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDNTGYYVLLANVYAEA--EK 676
                D   W  +L G   H    +A  +   + E+   PD   + ++ A   A    + 
Sbjct: 759 HS-EKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVLMCACSRAGMVIQG 817

Query: 677 WEEVKKLREKIS 688
           WE   +  EK S
Sbjct: 818 WELFHRRTEKFS 829


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 239/595 (40%), Positives = 368/595 (61%), Gaps = 14/595 (2%)

Query: 248 AEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           ++ GL V  ++++ G    D     T+L  C   G L  G+ VH   L + F  ++   N
Sbjct: 55  SKTGLHVL-DLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQN 113

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           +LL MY++CG L+GA R+F++M  R +VSWTSMI GYA+      A+ LF  M+ +G EP
Sbjct: 114 SLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEP 173

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           + + ++S++  C        G+ +H    +    S+++V ++L+DMYA+CG + +A  VF
Sbjct: 174 NEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVF 233

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALE 475
           +++  K+ VSWN +I           AL LFV M  + + P   T + +L +C+S+  LE
Sbjct: 234 DKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLE 293

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
           +G+ +H ++++        V N ++ MY K G +  A  +FD +   D++S   M+ GY 
Sbjct: 294 QGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYA 353

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
            HG G +A   F++M + GIEP++++F+SVL ACSH+ L+DEG  +F +MR + NIEPK+
Sbjct: 354 QHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMR-KYNIEPKV 412

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
            HYA +VDLL R G L +A  FIE MP+ P   IWG+LL   ++H   ++    A+ VFE
Sbjct: 413 SHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFE 472

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           L+P   G + LLAN+YA A +WE+V K+R+ +   G+KK P CSW+E++  V++FVA   
Sbjct: 473 LDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDV 532

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
           +HP  +KI  + ++L  ++K  GY P T + L+  D+ EKE+ L  HSEKLA++F +LN 
Sbjct: 533 AHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNT 592

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           P G TIR+ KN+RVCGDCH   K++S   +REI++RD+NRFHHF DG CSC  +W
Sbjct: 593 PPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 212/405 (52%), Gaps = 19/405 (4%)

Query: 149 KEGRRVFNKIDNGKV----FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
           K G  V + ID G +     ++N L+   ++ G  KE   +   + +     D    + +
Sbjct: 56  KTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSL 115

Query: 205 LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
           L   A  G+   ++ A +LFDE+  RD+VSW  MI+GY  N  A   L +F  ML+ G  
Sbjct: 116 LFMYARCGS---LEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAE 172

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            +  T+ +++  C    +   GR +HA   K      +   ++L+DMY++CG L  A+ V
Sbjct: 173 PNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLV 232

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F+K+G ++ VSW ++IAGYAR+G  + A+ LF  M REG  P  +  +++L +C+  G L
Sbjct: 233 FDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCL 292

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--- 441
           E GK +H ++ ++  +   YV N L+ MYAK GS+ DAE VF+++   D+VS N+M+   
Sbjct: 293 EQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGY 352

Query: 442 -------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                   A   F  M++   EP+ +T   +L AC+    L+ G+   G + ++ I    
Sbjct: 353 AQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKV 412

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
           +    IVD+  + G+L  A+S  + +P +  ++ W  ++    MH
Sbjct: 413 SHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMH 457



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 192/382 (50%), Gaps = 34/382 (8%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D   Y ++L+ C  L  L++GK VH  +  S     D V+ + L+FM+  CG L+  RR+
Sbjct: 73  DRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFK-HDLVIQNSLLFMYARCGSLEGARRL 131

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVV 211
           F+++ +  +  W  ++  Y++     ++L LF +M S G   + +T S ++KC   +A  
Sbjct: 132 FDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASY 191

Query: 212 GNSRRVK-----------------------------DAHKLFDELSDRDVVSWNCMISGY 242
              R++                              +A  +FD+L  ++ VSWN +I+GY
Sbjct: 192 NCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGY 251

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
              G  E+ L +F  M   G+     T   +LS C++ G L  G+ +HA  +K+      
Sbjct: 252 ARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVG 311

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              NTLL MY+K G +  A +VF+K+ +  VVS  SM+ GYA+ G+   A + F  M+R 
Sbjct: 312 YVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRF 371

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           GIEP+     S+L AC+   LL+ GK     +++ +++  +     ++D+  + G +  A
Sbjct: 372 GIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQA 431

Query: 423 ESVFNQMPVKDIVS-WNTMIGA 443
           +S   +MP++  V+ W  ++GA
Sbjct: 432 KSFIEEMPIEPTVAIWGALLGA 453



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 42/291 (14%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII----CESGIVIDDGVLGSKLVFMFVT 144
           S+ ++ +  T  S+++ C  + S   G+++H+      C S + +     GS LV M+  
Sbjct: 168 SDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFV-----GSSLVDMYAR 222

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
           CG L E   VF+K+       WN L+  Y++ G  +E+L LF +MQ  G     +T+S +
Sbjct: 223 CGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSAL 282

Query: 205 L------------------------KCLAVVGN--------SRRVKDAHKLFDELSDRDV 232
           L                        K +  VGN        S  ++DA K+FD+L   DV
Sbjct: 283 LSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDV 342

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           VS N M+ GY  +G+ ++  + F EM+  G   +  T ++VL+ C++   L  G+     
Sbjct: 343 VSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGL 402

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 342
             K     ++S   T++D+  + G LD A    E+M  E +V  W +++  
Sbjct: 403 MRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGA 453



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 26/228 (11%)

Query: 422 AESVFNQMPVKDIV--SWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGRE 479
           +ES F  +  ++++  S N+  G   L +    + EPD      +L  C  L  L+ G+ 
Sbjct: 36  SESTFCVIDDRNLLRPSLNSKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKL 95

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +H ++L      D  + N+++ MY +CG L  AR LFD +P +D++SWT MI GY  +  
Sbjct: 96  VHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDR 155

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC--NIEPKLEH 597
             DA+  F  M   G EP+E +  S++  C +            M  Y C   I      
Sbjct: 156 ASDALLLFPRMLSDGAEPNEFTLSSLVKCCGY------------MASYNCGRQIHACCWK 203

Query: 598 YAC---------MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           Y C         +VD+ +R G L EA    + +    + + W +L+ G
Sbjct: 204 YGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVS-WNALIAG 250


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 266/750 (35%), Positives = 418/750 (55%), Gaps = 62/750 (8%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
             L+ C   + L  GK +H++  +S  V     L +  + ++  C  L   RRVF+   +
Sbjct: 13  QFLKTCIAHRDLRTGKSLHALYIKS-FVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHD 71

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
             VF +N L+  Y+K                     +SY                 V+ A
Sbjct: 72  CNVFSFNTLISAYAK---------------------ESY-----------------VEVA 93

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA-N 279
           H+LFDE+   D VS+N +I+ Y   G  +   ++F EM     ++D  T+  +++ C  N
Sbjct: 94  HQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGIN 153

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE-RSVVSWTS 338
            G +   R +HA ++       +S  N L+  YSK G L  A R+F  + E R  VSW S
Sbjct: 154 VGLI---RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNS 210

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           M+  Y +      A+ L+  M   G+  D++ + S+L A      L  G   H  + ++ 
Sbjct: 211 MVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSG 270

Query: 399 MQSSLYVSNALMDMYAKCGS-MADAESVFNQMPVKDIVSWNTMIGALDLFVAM----LQN 453
              + +V + L+D+Y+KCG  M D   VF+++   D+V WNTMI    L+  +    L+ 
Sbjct: 271 YHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALEC 330

Query: 454 FE--------PDGVTMACILPACASLAALERGREIHGYILRHGISADR-NVANAIVDMYV 504
           F         PD  ++ C++ AC+++++  +GR++HG  L+  I ++R +V NA++ MY 
Sbjct: 331 FRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYS 390

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG L  A++LFD +P  + +S+  MIAGY  HG G  ++  F  M + G  P  ++FIS
Sbjct: 391 KCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFIS 450

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           VL AC+H+G V++G  +FNMM+ +  IEP+  H++CM+DLL R G LSEA R IE +P  
Sbjct: 451 VLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFD 510

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           P    W +LL  CRIH  V+LA K A  + +L+P N   YV+LAN+Y++  + ++   +R
Sbjct: 511 PGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVR 570

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
           + +  RG+KK PGCSWIE+  +++IFVA  + HP  KKI+  L+ +  ++K+ GY P+ R
Sbjct: 571 KLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVR 630

Query: 745 YALINAD----EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
            AL+  D    + E+E+ L  HSEKLA++FG+++   G+ I V KNLR+C DCH   K++
Sbjct: 631 SALVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYI 690

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           S+  +REI +RDS+RFH FKDG+CSC G+W
Sbjct: 691 SEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/406 (22%), Positives = 176/406 (43%), Gaps = 82/406 (20%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD-LKEGR 152
           +D  T  S+L    +++ L  G + H+ + +SG   +  V GS L+ ++  CG  + + R
Sbjct: 238 VDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHV-GSGLIDLYSKCGGCMLDCR 296

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFK-ESLYLFKKMQSLGIAADSYTFSCVLKC---- 207
           +VF++I N  + +WN ++  YS   +   E+L  F+++Q +G   D  +  CV+      
Sbjct: 297 KVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNM 356

Query: 208 -----------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
                                        +A+      ++DA  LFD + + + VS+N M
Sbjct: 357 SSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSM 416

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I+GY  +G+  + L +F+ ML +GF     T ++VL+ CA+ G +  G+ ++   +K  F
Sbjct: 417 IAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKF 475

Query: 299 --SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
               E    + ++D+  + G L  A R+ E +                            
Sbjct: 476 GIEPEAGHFSCMIDLLGRAGKLSEAERLIETI---------------------------- 507

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAK 415
                   +P  +  +++L AC   G +E+  K  +  ++ + + ++ YV   L ++Y+ 
Sbjct: 508 ------PFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYV--MLANIYSD 559

Query: 416 CGSMADAESVFNQMPVKDI-----VSWNTMIGALDLFVAMLQNFEP 456
            G + DA SV   M  + +      SW  +   + +FVA    F P
Sbjct: 560 NGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAE-DTFHP 604


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/706 (38%), Positives = 393/706 (55%), Gaps = 49/706 (6%)

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDV 232
           + +  +FK+   +  +M       D Y  S +    A    S  +  A K+FD++   ++
Sbjct: 146 FQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSA-LDYARKVFDQIPQPNL 204

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
            SWN +I     +    + + VF  ML +  F  +  T   ++   A     + G+AVH 
Sbjct: 205 YSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHG 264

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM--GERSVVSWTSMIAGYAREGVF 349
            A+K  F  ++   N+L+  Y+ CG LD A  VFE +    + +VSW SM+ G+ + G  
Sbjct: 265 MAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYP 324

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
           D A+ LF  M  EG+ P+   + S++ ACA    L +G+ V DYI  N+M  +L V NA 
Sbjct: 325 DKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNAT 384

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM--------- 450
           +DM+ KCG +  A  +F+ M  +D+VSW T+I           A D+F +M         
Sbjct: 385 IDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWN 444

Query: 451 --LQNFE-----------------------PDGVTMACILPACASLAALERGREIHGYIL 485
             +  +E                       PD VT+   L ACA L A++ G  IHGYI 
Sbjct: 445 VLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIK 504

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
           +  I  +RN+A +++DMY K G +  A  +F  I  KD+  W+ MIAG  MHG G  AI 
Sbjct: 505 KERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIE 564

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLL 605
            F DM++  ++P+ V+F ++L ACSHSGLVDEG R F+ M     + PK +HY+CMVD+L
Sbjct: 565 LFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVL 624

Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV 665
            R G+L EA +FIE MP+AP A++WG+LL  C IH  ++LAEK    + E+EP N G YV
Sbjct: 625 GRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYV 684

Query: 666 LLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIES 725
           LL+N+YA+   WE V +LR+++   GLKK  GCS IEI G V+ F+ G ++HP ++ I +
Sbjct: 685 LLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYA 744

Query: 726 LLKRLRLEMKREGYFPKTRYALINADEME-KEVALCGHSEKLAMAFGILNLPAGQTIRVT 784
            L  +   ++  GY   T   L   +E E KE AL  HSEK+A+AFG++   + Q IR+ 
Sbjct: 745 KLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIV 804

Query: 785 KNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KNLRVC DCH +AK +SK   R+IVLRD  RFHHF  G CSC+ +W
Sbjct: 805 KNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 35/281 (12%)

Query: 66  YNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           +N  I  + + G  ++A+    E+  +   ++ D  T  S L  CA L +++ G+ +H  
Sbjct: 443 WNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGY 502

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I +  I ++   L + L+ M+   GD+++   VF+ I N  VF+W+ ++   +  G  + 
Sbjct: 503 IKKERIQLNRN-LATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEA 561

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-----RDVVSWN 236
           ++ LF  MQ   +  +S TF+     L    +S  V +  +LFDE+            ++
Sbjct: 562 AIELFLDMQETQVKPNSVTFT---NLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYS 618

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA---FA 293
           CM+      G  E+ L+  + M        LA   +V       GAL+    +H     A
Sbjct: 619 CMVDVLGRAGHLEEALKFIEGM-------PLAPSASVW------GALLGACCIHGNLELA 665

Query: 294 LKACFS-KEISFNN-----TLLDMYSKCGDLDGAIRVFEKM 328
            KAC    EI   N      L ++Y+K GD +G   + ++M
Sbjct: 666 EKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQM 706


>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
 gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
          Length = 650

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/591 (42%), Positives = 370/591 (62%), Gaps = 17/591 (2%)

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
           E+L+L  N    T   ++  C +  +L+  + VH   L+  F ++      L++MYS   
Sbjct: 60  ELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFD 119

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
            +D A +VF+K   R++  + ++    +  G  +  + ++R M   GI  D +  T +L 
Sbjct: 120 SIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLK 179

Query: 377 ACACD----GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           AC        LL  G+++H +I  +     +++   L+DMYAK G +++A  VFNQMPVK
Sbjct: 180 ACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVK 239

Query: 433 DIVSWNTMIG----------ALDLFVAML---QNFEPDGVTMACILPACASLAALERGRE 479
           ++VSW+ MI           AL+LF  ++   Q+  P+ VTM  +L ACA+LAALE+GR 
Sbjct: 240 NVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRL 299

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           IHGYILR G+ +   V +A+V MY +CG L L + +FD +  +D++SW  +I+ YG+HGF
Sbjct: 300 IHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGF 359

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
           G  AI  F +M   G+EP  +SF+SVL ACSH+GLVDEG   FN M     I P +EHYA
Sbjct: 360 GKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYA 419

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           CMVDLL R   L EA + IE M + P   +WGSLL  CRIH  V+LAE+ +  +F+LEP 
Sbjct: 420 CMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPT 479

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           N G YVLLA++YAEA  W+ VK++++ +  RGL+K PG SWIE+K K+  FV+    +P 
Sbjct: 480 NAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPR 539

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
            +++ +LL +L +E+K EGY P+T+  L +    EKE  + GHSEKLA+AFG++N   G+
Sbjct: 540 MEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGE 599

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            IR+TK+LR+C DCH   KF+SK A +EI++RD NRFHHF+DG CSC  +W
Sbjct: 600 VIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 221/458 (48%), Gaps = 45/458 (9%)

Query: 26  FASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEV 85
           F S K + LP   +     S  + P   SI+      T + N  I   C+ GNL +A+E+
Sbjct: 4   FQSPKTTLLPSNATFLPRPS--LKPPICSITLNPTASTADNNKLIQSLCKQGNLTQALEL 61

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L  S +      TY  ++  C    SL D ++VH  + E+G    D  L +KL+ M+   
Sbjct: 62  L--SLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGF-DQDPFLATKLINMYSFF 118

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
             +   R+VF+K  N  ++++N L    S  G+ +E L ++++M S+GI +D +T++ VL
Sbjct: 119 DSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVL 178

Query: 206 K------CLAVVGNSRRVKDAHKL------------------------------FDELSD 229
           K      C   + N  R   AH L                              F+++  
Sbjct: 179 KACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPV 238

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSGCANCGALMFGR 287
           ++VVSW+ MI+ Y  NG A + LE+F+E++        +  TMV+VL  CA   AL  GR
Sbjct: 239 KNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGR 298

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            +H + L+      +   + L+ MY++CG L+   RVF++M +R VVSW S+I+ Y   G
Sbjct: 299 LIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHG 358

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVS 406
               AI +F  M   G+EP   +  S+L AC+  GL++ GK + + +   + +  S+   
Sbjct: 359 FGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHY 418

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
             ++D+  +   + +A  +   M ++     W +++G+
Sbjct: 419 ACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGS 456


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/627 (39%), Positives = 378/627 (60%), Gaps = 11/627 (1%)

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           R+ K ++ LF      ++  +N +I+G++ N +  + L++F  +   G  +   T   VL
Sbjct: 59  RQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVL 118

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             C    +   G  +H+  +K  F+ +++   +LL +YS  G L+ A ++F+++ +RSVV
Sbjct: 119 KACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVV 178

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           +WT++ +GY   G    AI LF+ MV  G++PD Y I  +L AC   G L+ G+ +  Y+
Sbjct: 179 TWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------L 444
           +E +MQ + +V   L+++YAKCG M  A SVF+ M  KDIV+W+TMI            +
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298

Query: 445 DLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           +LF+ MLQ N +PD  ++   L +CASL AL+ G      I RH    +  +ANA++DMY
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMY 358

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +     +F  +  KD++     I+G   +G    + A F    + GI PD  +F+
Sbjct: 359 AKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFL 418

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L  C H+GL+ +G RFFN +     ++  +EHY CMVDL  R G L +AYR I  MP+
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPM 478

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            P+A +WG+LL GCR+  + +LAE V + +  LEP N G YV L+N+Y+   +W+E  ++
Sbjct: 479 RPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEV 538

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R+ ++++G+KK PG SWIE++GKV+ F+A   SHP + KI + L+ L  EM+  G+ P T
Sbjct: 539 RDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTT 598

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
            +   + +E EKE  L  HSEKLA+A G+++   GQ IRV KNLRVCGDCHE+ K +SK 
Sbjct: 599 EFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKI 658

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
            RREIV+RD+NRFH F +G CSC  +W
Sbjct: 659 TRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 209/425 (49%), Gaps = 45/425 (10%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------ 207
           +F+      +F++N L++ +     F E+L LF  ++  G+    +TF  VLK       
Sbjct: 67  LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126

Query: 208 --------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
                                     L++   S R+ DAHKLFDE+ DR VV+W  + SG
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y  +G   + +++FK+M+ +G   D   +V VLS C + G L  G  +  +  +    K 
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
                TL+++Y+KCG ++ A  VF+ M E+ +V+W++MI GYA        I LF  M++
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           E ++PD ++I   L +CA  G L++G+     I  ++  ++L+++NAL+DMYAKCG+MA 
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366

Query: 422 AESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNFE-----PDGVTMACILPACAS 470
              VF +M  KDIV  N  I      G + L  A+    E     PDG T   +L  C  
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426

Query: 471 LAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWT 528
              ++ G R  +     + +         +VD++ + G+L  A R + DM    + I W 
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486

Query: 529 IMIAG 533
            +++G
Sbjct: 487 ALLSG 491



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 191/417 (45%), Gaps = 37/417 (8%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIIC 123
           YN+ I  F       + +++  S  K  +     T+  +L+ C    S + G  +HS++ 
Sbjct: 79  YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G   D   + S L+ ++   G L +  ++F++I +  V  W  L   Y+ +G  +E++
Sbjct: 139 KCGFNHDVAAMTS-LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR---------------------------- 215
            LFKKM  +G+  DSY    VL     VG+                              
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLY 257

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
               +++ A  +FD + ++D+V+W+ MI GY +N   ++G+E+F +ML      D  ++V
Sbjct: 258 AKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIV 317

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
             LS CA+ GAL  G    +   +  F   +   N L+DMY+KCG +     VF++M E+
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            +V   + I+G A+ G    +  +F    + GI PD      +L  C   GL++ G    
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF 437

Query: 392 DYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
           + I     ++ ++     ++D++ + G + DA  +   MP++ + + W  ++    L
Sbjct: 438 NAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRL 494


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/627 (39%), Positives = 375/627 (59%), Gaps = 11/627 (1%)

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           R+   +  LF      ++  +N +I+G++ N +  + L++F  +   G N+   T   VL
Sbjct: 59  RQTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVL 118

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             C        G  +H+  +K  F+ +++   +LL +YS  G L+ A +VFE++ ERSVV
Sbjct: 119 KACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVV 178

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           +WT++ +GY   G    AI LF+ MV  G+ PD Y I  +L AC   G L+ G+ +  ++
Sbjct: 179 TWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHM 238

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------L 444
           +E +MQ + +V   L+++YAKCG M  A SVF+ M  KDIV+W+TMI            +
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGI 298

Query: 445 DLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           + F+ MLQ N +PD  ++   L +CASL AL+ G      I RH    +  +ANA++DMY
Sbjct: 299 EFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMY 358

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +     +F  +  KD++     I+G   +G    + A F    + GI PD  +F+
Sbjct: 359 AKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFL 418

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L  C H+GL+ +G RFFN +     ++  +EHY CMVDL  R G L +AYR I  MP+
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPM 478

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            P+A +WG+LL GCR+  + +LAE V + +  LEP N G YV L+N+Y+ + +W+E  ++
Sbjct: 479 RPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEV 538

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R+ ++R+G+KK PG SWIE++G V+ F+A   SHP + KI + L+ L  EM+  G+ P T
Sbjct: 539 RDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTT 598

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
            +   + ++ EKE  L  HSEKLA+AFG+++   GQ IRV KNLRVCGDCHE+ K +SK 
Sbjct: 599 EFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKI 658

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
            RREIV+RD+NRFH F +G CSC  +W
Sbjct: 659 TRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 207/425 (48%), Gaps = 45/425 (10%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------ 207
           +F+      +F++N L++ +     F E+L LF  ++  G+    +TF  VLK       
Sbjct: 67  LFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASN 126

Query: 208 --------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
                                     L++   S R+ DAHK+F+E+ +R VV+W  + SG
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSG 186

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y   G   + +++FK+M+ +G   D   +V VLS C + G L  G  +     +    K 
Sbjct: 187 YTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKN 246

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
                TL+++Y+KCG ++ A  VF+ MGE+ +V+W++MI GYA        I  F  M++
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQ 306

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           E ++PD ++I   L +CA  G L++G+     I  ++  ++L+++NAL+DMYAKCG+MA 
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366

Query: 422 AESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNFE-----PDGVTMACILPACAS 470
              VF +M  KDIV  N  I      G + L  A+    E     PDG T   +L  C  
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426

Query: 471 LAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWT 528
              ++ G R  +     + +         +VD++ + G+L  A R + DM    + I W 
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486

Query: 529 IMIAG 533
            +++G
Sbjct: 487 ALLSG 491



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 187/417 (44%), Gaps = 37/417 (8%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIIC 123
           YN  I  F       + +++  S  K  ++    T+  +L+ C    + + G  +HS++ 
Sbjct: 79  YNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVV 138

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G   D   + S L+ ++   G L +  +VF +I    V  W  L   Y+  G  +E++
Sbjct: 139 KCGFNHDVAAMTS-LLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAI 197

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR---------------------------- 215
            LFKKM  +G+  DSY    VL     VG+                              
Sbjct: 198 DLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLY 257

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
               +++ A  +FD + ++D+V+W+ MI GY +N   ++G+E F +ML      D  ++V
Sbjct: 258 AKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIV 317

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
             LS CA+ GAL  G    +   +  F   +   N L+DMY+KCG +     VF++M E+
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            +V   + I+G A+ G    +  +F    + GI PD      +L  C   GL++ G    
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF 437

Query: 392 DYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
           + I     ++ ++     ++D++ + G + DA  +   MP++ + + W  ++    L
Sbjct: 438 NAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRL 494


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/696 (37%), Positives = 388/696 (55%), Gaps = 47/696 (6%)

Query: 181 ESLYLFKKMQS----LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWN 236
           +S+Y  K++ S    +G+++D   F   +        S ++  A ++FD +    +  WN
Sbjct: 18  KSMYQLKQIHSHTIKMGLSSDP-LFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWN 76

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MI GY      + G+ ++  ML      D  T   +L G     AL +G+ +   A+K 
Sbjct: 77  TMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKH 136

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            F   +      + M+S C  +D A +VF+      VV+W  M++GY R   F  +  LF
Sbjct: 137 GFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLF 196

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M + G+ P+   +  +L AC+    LE GK ++ YI    ++ +L + N L+DM+A C
Sbjct: 197 IEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAAC 256

Query: 417 GSMADAESVFNQMPVKDIVSW--------------------------------------- 437
           G M +A+SVF+ M  +D++SW                                       
Sbjct: 257 GEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYL 316

Query: 438 --NTMIGALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
             N  I AL LF  M + N +PD  TM  IL ACA L ALE G  +  YI ++ I  D  
Sbjct: 317 RMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTF 376

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V NA++DMY KCG +  A+ +F  +  KD  +WT MI G  ++G G +A+A F++M +A 
Sbjct: 377 VGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEAS 436

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           I PDE+++I VL AC+H+G+V++G  FF  M  +  I+P + HY CMVDLL R G L EA
Sbjct: 437 ITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEA 496

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           +  I  MPV P++ +WGSLL  CR+H  V+LAE  A+ + ELEP+N   YVLL N+YA  
Sbjct: 497 HEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAAC 556

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
           ++WE ++++R+ +  RG+KK PGCS +E+ G V  FVAG  SHP +K+I + L+ +  ++
Sbjct: 557 KRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDL 616

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
            + GY P T    ++  E +KE AL  HSEKLA+A+ +++   G TIR+ KNLR+C DCH
Sbjct: 617 IKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCH 676

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            MAK +S+   RE+++RD  RFHHF+ G CSC  FW
Sbjct: 677 HMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 237/516 (45%), Gaps = 84/516 (16%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFV---TCGDLKEGRRVFNK 157
           S+L+ C   KS+   K++HS   + G+  D   L  K V  F      G +   R+VF+ 
Sbjct: 12  SLLEKC---KSMYQLKQIHSHTIKMGLSSDP--LFQKRVIAFCCAHESGKMIYARQVFDA 66

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------- 209
           I    +FIWN ++  YS+  + +  + ++  M +  I  D +TF  +LK           
Sbjct: 67  IPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYG 126

Query: 210 -VVGNS-----------------------RRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
            V+ N                        R V  A K+FD     +VV+WN M+SGY   
Sbjct: 127 KVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRV 186

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
              +K   +F EM   G + +  T+V +LS C+    L  G+ ++ +       + +   
Sbjct: 187 KQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILE 246

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG------------------ 347
           N L+DM++ CG++D A  VF+ M  R V+SWTS++ G+A  G                  
Sbjct: 247 NVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYV 306

Query: 348 ----VFDGAIR---------LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
               + DG +R         LFR M    ++PD + + SIL ACA  G LE+G+ V  YI
Sbjct: 307 SWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYI 366

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GAL 444
            +N +++  +V NAL+DMY KCG++  A+ VF +M  KD  +W  MI           AL
Sbjct: 367 DKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEAL 426

Query: 445 DLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIH-GYILRHGISADRNVANAIVDM 502
            +F  M++ +  PD +T   +L AC     +E+G+       ++HGI  +      +VD+
Sbjct: 427 AMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDL 486

Query: 503 YVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
             + G L  A  +   +P K + I W  ++    +H
Sbjct: 487 LGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVH 522



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 207/486 (42%), Gaps = 82/486 (16%)

Query: 82  AMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK-LVF 140
           +M +L  +   K D  T+  +L+      +L+ GK + +   + G   D  +   K  + 
Sbjct: 93  SMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGF--DSNLFVQKAFIH 150

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           MF  C  +   R+VF+  D  +V  WN+++  Y++   FK+S  LF +M+  G++ +S T
Sbjct: 151 MFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVT 210

Query: 201 FSCVLKCLAVVGNSR--------------------------------RVKDAHKLFDELS 228
              +L   + + +                                   + +A  +FD + 
Sbjct: 211 LVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMK 270

Query: 229 DRDV-------------------------------VSWNCMISGYIANGVAEKGLEVFKE 257
           +RDV                               VSW  MI GY+      + L +F+E
Sbjct: 271 NRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFRE 330

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           M       D  TMV++L+ CA+ GAL  G  V  +  K     +    N L+DMY KCG+
Sbjct: 331 MQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGN 390

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           +  A +VF++M  +   +WT+MI G A  G  + A+ +F  M+   I PD      +L A
Sbjct: 391 VGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCA 450

Query: 378 CACDGLLEIGKDVH-DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIV 435
           C   G++E G+        ++ ++ ++     ++D+  + G + +A  V   MPVK + +
Sbjct: 451 CTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSI 510

Query: 436 SWNTMIGA---------LDLFVAMLQNFEPDGVTMACILPACASLAALERG---REIHGY 483
            W +++GA          ++    +   EP+   +  +L  C   AA +R    R++   
Sbjct: 511 VWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLL--CNIYAACKRWENLRQVRKL 568

Query: 484 ILRHGI 489
           ++  GI
Sbjct: 569 MMERGI 574



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/344 (22%), Positives = 135/344 (39%), Gaps = 68/344 (19%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQL--CADLKSLEDGKKVHSIIC 123
           +N  +  +  V   +K+  +    EK  +   +   +L L  C+ LK LE GK ++  I 
Sbjct: 176 WNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYI- 234

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN----- 178
             GIV  + +L + L+ MF  CG++ E + VF+ + N  V  W  ++  ++  G      
Sbjct: 235 NGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLAR 294

Query: 179 --------------------------FKESLYLFKKMQSLGIAADSYTFSCVLKCLA--- 209
                                     F E+L LF++MQ   +  D +T   +L   A   
Sbjct: 295 KYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLG 354

Query: 210 ---------------------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMIS 240
                                 VGN+          V  A K+F E+  +D  +W  MI 
Sbjct: 355 ALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIV 414

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH-AFALKACFS 299
           G   NG  E+ L +F  M+      D  T + VL  C + G +  G++   +  ++    
Sbjct: 415 GLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIK 474

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAG 342
             ++    ++D+  + G L+ A  V   M  + + + W S++  
Sbjct: 475 PNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGA 518


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/651 (37%), Positives = 386/651 (59%), Gaps = 15/651 (2%)

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
           LG+  D+Y  + +L+       ++    A  +F +    ++  +N +I G ++N      
Sbjct: 29  LGLHQDTYLINLLLRSSLHFAATQY---ATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDA 85

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGA-LMFGRAVHAFALKACFSKEISFNNTLLD 310
           + V+  M   GF  D  T   VL  C         G ++H+  +K  F  ++     L+ 
Sbjct: 86  VSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVC 145

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           +YSK G L  A +VF+++ E++VVSWT++I GY   G F  A+ LFRG++  G+ PD + 
Sbjct: 146 LYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFT 205

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           +  IL+AC+  G L  G+ +  Y++E+    +++V+ +L+DMYAKCGSM +A  VF+ M 
Sbjct: 206 LVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMV 265

Query: 431 VKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGRE 479
            KD+V W+ +I           ALD+F  M  +N  PD   M  +  AC+ L ALE G  
Sbjct: 266 EKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNW 325

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
             G +      ++  +  A++D Y KCG +  A+ +F  +  KD + +  +I+G  M G 
Sbjct: 326 ARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGH 385

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
              A   F  M + G++PD  +F+ +L  C+H+GLVD+G R+F+ M    ++ P +EHY 
Sbjct: 386 VGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYG 445

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           CMVDL +R G L EA   I  MP+  ++ +WG+LL GCR+H + +LAE V + + ELEP 
Sbjct: 446 CMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPW 505

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           N+G+YVLL+N+Y+ + +W+E +K+R  ++++G++K PGCSW+E+ G V+ F+ G +SHP 
Sbjct: 506 NSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPL 565

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
           + KI   L+ L  +++  GY P T + L + +E EKE  L  HSEKLA+AF +++  A  
Sbjct: 566 SHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKD 625

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            IRV KNLRVCGDCHE  K +SK   REI++RD+NRFHHF +G CSCR +W
Sbjct: 626 VIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 228/475 (48%), Gaps = 47/475 (9%)

Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNL 168
           LKSL   K+ H ++   G+   D  L + L+   +     +    VF +  +  +F++N 
Sbjct: 13  LKSLHQAKQCHCLLLRLGL-HQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNT 71

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--------------------- 207
           L+        F++++ ++  M+  G A D++TF  VLK                      
Sbjct: 72  LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKT 131

Query: 208 ------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                       + +   +  + DA K+FDE+ +++VVSW  +I GYI +G   + L +F
Sbjct: 132 GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLF 191

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
           + +L +G   D  T+V +L  C+  G L  GR +  +  ++     +    +L+DMY+KC
Sbjct: 192 RGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKC 251

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G ++ A RVF+ M E+ VV W+++I GYA  G+   A+ +F  M RE + PD YA+  + 
Sbjct: 252 GSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVF 311

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            AC+  G LE+G      +  ++  S+  +  AL+D YAKCGS+A A+ VF  M  KD V
Sbjct: 312 SACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCV 371

Query: 436 SWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG-REIHGY 483
            +N +I           A  +F  M++   +PDG T   +L  C     ++ G R   G 
Sbjct: 372 VFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGM 431

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
                ++        +VD+  + G+LV A+ L   +P + + I W  ++ G  +H
Sbjct: 432 SSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLH 486



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 182/392 (46%), Gaps = 46/392 (11%)

Query: 95  DTKTYCSILQLCADLKS-LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           D  T+  +L+ C  L      G  +HS++ ++G   D  V  + LV ++   G L + R+
Sbjct: 100 DNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFV-KTGLVCLYSKNGFLTDARK 158

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VF++I    V  W  ++  Y ++G F E+L LF+ +  +G+  DS+T   +L   + VG+
Sbjct: 159 VFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGD 218

Query: 214 --SRR------------------------------VKDAHKLFDELSDRDVVSWNCMISG 241
             S R                              +++A ++FD + ++DVV W+ +I G
Sbjct: 219 LASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQG 278

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y +NG+ ++ L+VF EM       D   MV V S C+  GAL  G           F   
Sbjct: 279 YASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSN 338

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
                 L+D Y+KCG +  A  VF+ M  +  V + ++I+G A  G    A  +F  MV+
Sbjct: 339 PVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVK 398

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS------NALMDMYAK 415
            G++PD      +L  C   GL++   D H Y   + M S   V+        ++D+ A+
Sbjct: 399 VGMQPDGNTFVGLLCGCTHAGLVD---DGHRYF--SGMSSVFSVTPTIEHYGCMVDLQAR 453

Query: 416 CGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
            G + +A+ +   MP++ + + W  ++G   L
Sbjct: 454 AGLLVEAQDLIRSMPMEANSIVWGALLGGCRL 485



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 138/303 (45%), Gaps = 19/303 (6%)

Query: 373 SILHACACDGL--LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           S L  C   GL  L   K  H  +    +    Y+ N L+       +   A  VF Q P
Sbjct: 3   SELKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTP 62

Query: 431 VKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAA-LERGR 478
             +I  +NT+I           A+ ++ +M Q+ F PD  T   +L AC  L      G 
Sbjct: 63  HPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGL 122

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
            +H  +++ G   D  V   +V +Y K G L  AR +FD IP K+++SWT +I GY   G
Sbjct: 123 SLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESG 182

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
              +A+  F  + + G+ PD  + + +LYACS  G +  G R+ +    E      +   
Sbjct: 183 CFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASG-RWIDGYMRESGSVGNVFVA 241

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
             +VD+ ++ G++ EA R  + M V  D   W +L+ G   +    + ++  +  FE++ 
Sbjct: 242 TSLVDMYAKCGSMEEARRVFDGM-VEKDVVCWSALIQG---YASNGMPKEALDVFFEMQR 297

Query: 659 DNT 661
           +N 
Sbjct: 298 ENV 300


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 276/784 (35%), Positives = 431/784 (54%), Gaps = 51/784 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T   +++ C  +  +  G+ VH    ++  V+ D  +G+ L+ M+   G ++   +V
Sbjct: 195 DNFTLPCVIKACVGVYDVRLGEAVHGFALKTK-VLSDVFVGNALIAMYGKFGFVESAVKV 253

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS--LGIAADSYTFSCVLKCLAVVG 212
           F+K+    +  WN +M+   + G F+ES  LFK + +   G+  D  T   V+   A  G
Sbjct: 254 FDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQG 313

Query: 213 NSR--------------------------------RVKDAHKLFDELSDRDVVSWNCMIS 240
             R                                 + +A  LFD  ++++V+SWN MI 
Sbjct: 314 EVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIG 372

Query: 241 GYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF- 298
           GY  +       E+ ++M +     V+  T++ VL  C      +  + +H +AL+  F 
Sbjct: 373 GYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFI 432

Query: 299 -SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
            S E+   N  +  Y+KCG L  A  VF  M  + V SW ++I G+ + G    A+ L+ 
Sbjct: 433 QSDEL-VANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYL 491

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M   G+EPD++ I S+L ACA    L  GK++H  +  N  +   ++  +L+ +Y +CG
Sbjct: 492 LMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCG 551

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILP 466
            +  A+  F+ M  K++V WNTMI           ALD+F  ML +   PD +++   L 
Sbjct: 552 KILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALG 611

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
           AC+ ++AL  G+E+H + ++  ++    V  +++DMY KCG +  ++++FD +  K  ++
Sbjct: 612 ACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVT 671

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           W ++I GYG+HG G  AI  F  M+ AG  PD V+FI++L AC+H+GLV EG  +   M+
Sbjct: 672 WNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQ 731

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
               I+PKLEHYAC+VD+L R G L+EA   +  +P  PD+ IW SLL  CR + ++ + 
Sbjct: 732 SLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIG 791

Query: 647 EKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGK 706
           EKVA  + EL PD    YVL++N YA   KW+EV+K+R+++   GL+K+ GCSWIEI GK
Sbjct: 792 EKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGK 851

Query: 707 VNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKL 766
           V+ F+ G  S   + KI+     L  ++ + GY P T   L   +E EK   L  HSEKL
Sbjct: 852 VSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKL 911

Query: 767 AMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           A++FG+LN   G T+RV KNLR+C DCH   K +SK  +REI++RD+ RFHHFK+G CSC
Sbjct: 912 AISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSC 971

Query: 827 RGFW 830
             +W
Sbjct: 972 GDYW 975



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 204/804 (25%), Positives = 345/804 (42%), Gaps = 164/804 (20%)

Query: 15  FSPPNQSYGKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVC---KTKNYNAEIG 71
            +PP  S+   F  +   TL  I +     S T  P S+ +   ++    K +N +    
Sbjct: 6   LTPPPLSFS--FHHHHNLTLQNINNKIPFHSFT-PPKSSHLFSPIISSHKKQQNASKHFH 62

Query: 72  RFCEVGNLEKAMEVLYS------SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICES 125
             C  GNL +A   L S      S  +    +    +LQLC + K++E G+K+H+ I   
Sbjct: 63  NLCNTGNLNQAFNFLQSNLNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFI--- 119

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
                                                           S + +F+  + L
Sbjct: 120 ------------------------------------------------STSPHFQNDVVL 131

Query: 186 FKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
             ++ ++    DS   SC+     V   SRR             +++  WN ++SGY+ N
Sbjct: 132 ITRLVTMYSICDSPYDSCL-----VFNASRR-------------KNLFLWNALLSGYLRN 173

Query: 246 GVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            +    + VF EM++L  F  D  T+  V+  C     +  G AVH FALK     ++  
Sbjct: 174 SLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFV 233

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR--E 362
            N L+ MY K G ++ A++VF+KM +R++VSW S++      GVF+ +  LF+G++   E
Sbjct: 234 GNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDE 293

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G+ PDV  + +++  CA  G + +G   H    +  +   L V+++L+DMY+KCG + +A
Sbjct: 294 GLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEA 353

Query: 423 ESVFNQMPVKDIVSWNTMI----------GALDLF--VAMLQNFEPDGVTMACILPACAS 470
             +F+    K+++SWN+MI          GA +L   + M    + + VT+  +LP C  
Sbjct: 354 RVLFDTNE-KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEE 412

Query: 471 LAALERGREIHGYILRHG-ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
                + +EIHGY LRHG I +D  VANA V  Y KCG L  A  +F  + +K + SW  
Sbjct: 413 EIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNA 472

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS-----------HSGLVDEG 578
           +I G+  +GF   A+  +  MR +G+EPD  +  S+L AC+           H  ++  G
Sbjct: 473 LIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNG 532

Query: 579 WR------------------------FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           +                         FF+ M      E  L  +  M++  S+     +A
Sbjct: 533 FELDEFICISLVSLYVQCGKILLAKLFFDNME-----EKNLVCWNTMINGFSQNEFPFDA 587

Query: 615 YRFIEMM---PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVL---LA 668
                 M    + PD       L  C     ++L +++  H F ++   T +  +   L 
Sbjct: 588 LDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKEL--HCFAVKSHLTEHSFVTCSLI 645

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           ++YA+    E+ + + +++  +G       +W       N+ + G   H H +K   L K
Sbjct: 646 DMYAKCGCMEQSQNIFDRVHLKG-----EVTW-------NVLITGYGIHGHGRKAIELFK 693

Query: 729 RLRLEMKREGYFPK--TRYALINA 750
                M+  G+ P   T  AL+ A
Sbjct: 694 ----SMQNAGFRPDSVTFIALLTA 713



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 111/484 (22%), Positives = 211/484 (43%), Gaps = 70/484 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N+ IG + +  +   A E+L      +K K++  T  ++L +C +       K++H  
Sbjct: 366 SWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGY 425

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
               G +  D ++ +  V  +  CG L     VF  +++  V  WN L+  + + G  ++
Sbjct: 426 ALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRK 485

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLK-----------------------------CLAVVG 212
           +L L+  M+  G+  D +T + +L                              C+++V 
Sbjct: 486 ALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVS 545

Query: 213 ---NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                 ++  A   FD + ++++V WN MI+G+  N      L++F +ML+     D  +
Sbjct: 546 LYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEIS 605

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           ++  L  C+   AL  G+ +H FA+K+  ++      +L+DMY+KCG ++ +  +F+++ 
Sbjct: 606 IIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVH 665

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            +  V+W  +I GY   G    AI LF+ M   G  PD     ++L AC   GL+  G  
Sbjct: 666 LKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGL- 724

Query: 390 VHDYIKENDMQSSLYVSNAL------MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
             +Y+ +  MQS   +   L      +DM  + G + +A  + N++P K           
Sbjct: 725 --EYLGQ--MQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDK----------- 769

Query: 444 LDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
                       PD    + +L +C +   L+ G ++   +L  G     N    I + Y
Sbjct: 770 ------------PDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYV-LISNFY 816

Query: 504 VKCG 507
            + G
Sbjct: 817 ARLG 820


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 263/720 (36%), Positives = 408/720 (56%), Gaps = 50/720 (6%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           +   + N + F++N L++ YSK GN   + ++F KM       +S++++ +L   +  G+
Sbjct: 31  IIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQ----PNSFSWNTMLSAYSKSGD 86

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVT 272
              +    ++F  + +RD VSWN +ISGY+  G   + ++ +  M+  G  N++  T  T
Sbjct: 87  ---LSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFST 143

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L   ++ G +  GR +H   +K  F   +   ++L+DMY+K G +  A +VF+++ ER+
Sbjct: 144 MLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERN 203

Query: 333 VV-------------------------------SWTSMIAGYAREGVFDGAIRLFRGMVR 361
           VV                               SWT+MI G  + G+   A+ LFR M +
Sbjct: 204 VVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQ 263

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           EG+  D Y   S+L AC     L+ GK++H  I  +    +++V +AL+DMY KC S+  
Sbjct: 264 EGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRY 323

Query: 422 AESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACAS 470
           AE+VF +M  K++VSW  M+           A+ +F  M +N  EPD  T+  ++ +CA+
Sbjct: 324 AEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCAN 383

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           LA+LE G + H   L  G+ +   V+NA++ +Y KCG +  +  LFD +  +D +SWT +
Sbjct: 384 LASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTAL 443

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           ++GY   G   + I  F  M   G++PD V+FI+VL ACS +GLV+ G ++F  M  +  
Sbjct: 444 VSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHG 503

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           I P  +HY CM+DL  R G L EA  FI  MP +PD+  W +LL  CR++   ++ +  A
Sbjct: 504 IIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAA 563

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
           E + EL+P N   Y+LL+++YA   KW  V +LR  +  +G +K PG SWI+ K KV IF
Sbjct: 564 ESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIF 623

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
            A   S P + +I + L++L  +M  EGY P     L + ++ EK   L  HSEKLA+AF
Sbjct: 624 SADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAF 683

Query: 771 GILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G+L +P G  IRV KNLRVCGDCH   K++SK ++REI++RD+ RFH FKDG CSC  FW
Sbjct: 684 GLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 220/461 (47%), Gaps = 82/461 (17%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
            + +H   +K+  + E    N L++ YSK G++  A  VF+KM + +  SW +M++ Y++
Sbjct: 24  AKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSK 83

Query: 346 EG-------VF------DG------------------AIRLFRGMVREGI-EPDVYAITS 373
            G       +F      DG                  A++ +  M+++G+   +    ++
Sbjct: 84  SGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFST 143

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ----- 428
           +L   +  G +++G+ +H  I +    + ++V ++L+DMYAK G ++ A  VF++     
Sbjct: 144 MLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERN 203

Query: 429 --------------------------MPVKDIVSWNTMIG----------ALDLFVAMLQ 452
                                     M  +D +SW TMI           A+DLF  M Q
Sbjct: 204 VVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQ 263

Query: 453 N-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
                D  T   +L AC  L AL+ G+EIH  I+R G + +  V +A+VDMY KC  +  
Sbjct: 264 EGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRY 323

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A ++F  +  K+++SWT M+ GYG +GF  +A+  F DM++ GIEPD+ +  SV+ +C++
Sbjct: 324 AEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCAN 383

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
              ++EG + F+       +   +     ++ L  + G++ ++ +  + M    D   W 
Sbjct: 384 LASLEEGAQ-FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFR-DEVSWT 441

Query: 632 SLLCGC----RIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           +L+ G     + +  + L E++   V  L+PD   +  +L+
Sbjct: 442 ALVSGYAQFGKANETIDLFERML--VQGLKPDAVTFIAVLS 480



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 216/451 (47%), Gaps = 69/451 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N+ I  +   G++ +A++   S  K     ++  T+ ++L L +    ++ G+++H  
Sbjct: 104 SWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQ 163

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK- 180
           I + G      V GS LV M+   G +    +VF+++    V ++N ++    ++G  K 
Sbjct: 164 IVKFGFGAYVFV-GSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKD 222

Query: 181 ------------------------------ESLYLFKKMQSLGIAADSYTFSCVLKCLA- 209
                                         E++ LF+ M+  G+A D YTF  VL     
Sbjct: 223 SKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGG 282

Query: 210 -----------------------VVGNS--------RRVKDAHKLFDELSDRDVVSWNCM 238
                                   VG++        R V+ A  +F  +++++VVSW  M
Sbjct: 283 LRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAM 342

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           + GY  NG +E+ + VF +M   G   D  T+ +V+S CAN  +L  G   H  AL +  
Sbjct: 343 LVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGL 402

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
              I+ +N L+ +Y KCG ++ + ++F++M  R  VSWT++++GYA+ G  +  I LF  
Sbjct: 403 ISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFER 462

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHD-YIKENDMQSSLYVSNALMDMYAKCG 417
           M+ +G++PD     ++L AC+  GL+E G+   +  +K++ +         ++D++ + G
Sbjct: 463 MLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAG 522

Query: 418 SMADAESVFNQMPVK-DIVSWNTMIGALDLF 447
            + +A++  N+MP   D + W T++ +  L+
Sbjct: 523 RLEEAKNFINKMPFSPDSIGWATLLSSCRLY 553



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 32/143 (22%)

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C       + +++H  I++   + +  + N +++ Y K G +  AR +FD +P  +  SW
Sbjct: 15  CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 528 TIM-------------------------------IAGYGMHGFGCDAIATFNDMRQAGI- 555
             M                               I+GY  +G   +A+ T+N M + G+ 
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 556 EPDEVSFISVLYACSHSGLVDEG 578
             + ++F ++L   S  G VD G
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLG 157


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/774 (34%), Positives = 431/774 (55%), Gaps = 49/774 (6%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L++C  +     G+++H +  + G    +  +G+ LV M++ CG +++GR VF  +   
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN---SRRV- 217
            V  W  L+  Y +     + + LF +M++ G+  + +TF+ VL  +A  G     RRV 
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224

Query: 218 ----------------------------KDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                       ++A  +F ++  RD+VSWN +++G + N    
Sbjct: 225 AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQL 284

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L++F +       +  +T  TV+  CAN   L   R +H+  LK  F  + +    ++
Sbjct: 285 EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIM 344

Query: 310 DMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           D YSKCG+LD A  +F  M G ++VVSWT+MI G  +      A  LF  M  + ++P+ 
Sbjct: 345 DAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNE 404

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           +  +++L A     +  +   +H  I + + Q +  V  AL+  Y+K G+  +A S+F  
Sbjct: 405 FTYSTVLTA----SIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKM 460

Query: 429 MPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACAS-LAALER 476
           +  KD+V+W+ M+          GA ++F+ M +Q  +P+  T++  + ACAS  A +++
Sbjct: 461 IDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQ 520

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           GR+ H   +++       V +A+V MY + G +  AR +F+    +DL+SW  MI+GY  
Sbjct: 521 GRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQ 580

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG+  +A+ TF  M   GIE D  +F++V+  C+H+GLV EG ++F+ M  + NI P +E
Sbjct: 581 HGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTME 640

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HY+CMVDL SR G L E    IE MP    A +W +LL  CR+H  V+L +  A+ +  L
Sbjct: 641 HYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLL 700

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           EPD++  YVLL+N+YA A +W+E  ++R+ +  + +KK  GCSWI+IK KV+ F+A   S
Sbjct: 701 EPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKS 760

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP +++I + LK +   +K+EGY P T   L +  E +KE  L  HSE+LA+AFG++  P
Sbjct: 761 HPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATP 820

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               +++ KNLRVCGDCH + K +S    REI++RD +RFHHF  G CSC  FW
Sbjct: 821 PRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 191/397 (48%), Gaps = 35/397 (8%)

Query: 81  KAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           +A+++ + S  S  K+   TY ++++LCA+LK L   +++HS + + G   D  V+ + +
Sbjct: 285 EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVM-TAI 343

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGK-VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           +  +  CG+L +   +F  +   + V  W  ++    +  +   +  LF +M+   +  +
Sbjct: 344 MDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPN 403

Query: 198 SYTFSCVLKC----------------------------LAVVGNSRRVKDAHKLFDELSD 229
            +T+S VL                              LA        ++A  +F  +  
Sbjct: 404 EFTYSTVLTASIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDH 463

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA-LMFGRA 288
           +DVV+W+ M+S Y   G  +    VF +M   G   +  T+ + +  CA+  A +  GR 
Sbjct: 464 KDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQ 523

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
            HA ++K  +   I   + L+ MY++ G +D A  VFE+  +R +VSW SMI+GYA+ G 
Sbjct: 524 FHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGY 583

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD-YIKENDMQSSLYVSN 407
              A+  FR M   GIE D     +++  C   GL++ G+   D  + ++++  ++   +
Sbjct: 584 SKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYS 643

Query: 408 ALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            ++D+Y++ G + +  ++   MP     + W T++GA
Sbjct: 644 CMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGA 680



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 11/199 (5%)

Query: 443 ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS-ADRNVANAIVD 501
           ALD FV + +     G  ++ +L  C  +     G ++H   ++ G   A+  V  A+VD
Sbjct: 84  ALDHFVDVHRCGRVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVD 143

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC-DAIATFNDMRQAGIEPDEV 560
           MY+KCG +   R +F+ +P +++++WT ++ GY + G  C D +A F  MR  G+ P+  
Sbjct: 144 MYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGY-VQGRACSDVMALFFRMRAEGVWPNPF 202

Query: 561 SFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYAC--MVDLLSRTGNLSEAYRF 617
           +F SVL A +  G VD G R     +++ C    +   + C  ++++ S+ G + EA   
Sbjct: 203 TFTSVLSAVASQGAVDLGRRVHAQSVKFGC----RSTVFVCNSLINMYSKCGLVEEAKAV 258

Query: 618 IEMMPVAPDATIWGSLLCG 636
              M    D   W +L+ G
Sbjct: 259 FRQMETR-DMVSWNTLMAG 276


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/594 (42%), Positives = 347/594 (58%), Gaps = 46/594 (7%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G  VHA  L           + ++  Y+  GD+D ++ VF  +GE S + + SMI  
Sbjct: 86  LKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRA 145

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           YAR G  +  +  +  M   G   D +    +L +      + +GK VH  I    +Q  
Sbjct: 146 YARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFD 205

Query: 403 LYVSNALMDMYAKCGSMADAESVFN-------------------------------QMPV 431
           LYV+ +L+ +Y KCG + DA  VF+                               +MP 
Sbjct: 206 LYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPW 265

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ---NFEPDGVTMACILPACASLAALERGR 478
           ++IVSW TMI           AL LF  M++      P+ VT+  +LPACA L+ LERGR
Sbjct: 266 RNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGR 325

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP--AKDLISWTIMIAGYGM 536
           +IH    R G++++ +V  A+  MY KCG LV AR+ FD +    K+LI+W  MI  Y  
Sbjct: 326 QIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYAS 385

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           +G G  A++TF +M QAGI+PD+++F  +L  CSHSGLVD G ++FN M    +I P++E
Sbjct: 386 YGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVE 445

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HYAC+ DLL R G L+EA + +  MP+    +IWGSLL  CR H  +++AE  A  +F L
Sbjct: 446 HYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVL 505

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           EP+NTG YVLL+N+YAEA +W+EV KLR  +  +G KK+PGCSWIEI GK ++F+ G +S
Sbjct: 506 EPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTS 565

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP  K+I   L+ L  +MK  GYFP T Y L +  E EKE  L  HSEKLA+AFGILN P
Sbjct: 566 HPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTP 625

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           A   +RVTKNLR+CGDCH    F+S+   RE+++RD NRFHHFK G CSC  +W
Sbjct: 626 AETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 199/467 (42%), Gaps = 84/467 (17%)

Query: 52  SASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKS 111
           SA I       +  +   I        L+  ++ L +     I   +Y  + Q    L  
Sbjct: 28  SAHIDTVPPPSSPPFKCSISPLTISATLQNLLQPLSAPGPPPI--LSYAPVFQFLTGLNM 85

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           L+ G +VH+ +   G+     ++GSK+V  + + GD+     VFN I      ++N ++ 
Sbjct: 86  LKLGHQVHAHMLLRGLQ-PTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIR 144

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------------------------ 207
            Y++ G  + ++  +  M S G   D +TF  VLK                         
Sbjct: 145 AYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQF 204

Query: 208 --------LAVVGNSRRVKDAHKLFDELSDRDVVSWNC---------------------- 237
                   + + G    + DA K+FD ++ RDV SWN                       
Sbjct: 205 DLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMP 264

Query: 238 ---------MISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSGCANCGALMFG 286
                    MISGY  +G+A++ L +F EM+  + G   +  T+++VL  CA    L  G
Sbjct: 265 WRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERG 324

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM--GERSVVSWTSMIAGYA 344
           R +H  A +   +   S    L  MY+KCG L  A   F+K+   E+++++W +MI  YA
Sbjct: 325 RQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYA 384

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
             G    A+  FR M++ GI+PD    T +L  C+  GL+++G      +K  +  S+ Y
Sbjct: 385 SYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG------LKYFNHMSTTY 438

Query: 405 VSNALMDMYA-------KCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
             N  ++ YA       + G +A+A  +  +MP+    S W +++ A
Sbjct: 439 SINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 485



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 163/362 (45%), Gaps = 47/362 (12%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K +A   +S  +  +  +F+ + +   + +N MI  Y   G AE+ +  +  M + GF  
Sbjct: 110 KMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTG 169

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T   VL       ++  G+ VH   L+     ++    +L+ +Y KCG+++ A +VF
Sbjct: 170 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 229

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDG-------------------------------AIR 354
           + M  R V SW +++AGY + G  D                                A+ 
Sbjct: 230 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 289

Query: 355 LFRGMVRE--GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
           LF  MV+E  G+ P+   I S+L ACA    LE G+ +H+      + S+  V  AL  M
Sbjct: 290 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 349

Query: 413 YAKCGSMADAESVFNQMPV--KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGV 459
           YAKCGS+ DA + F+++    K++++WNTMI           A+  F  M+Q   +PD +
Sbjct: 350 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 409

Query: 460 TMACILPACASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           T   +L  C+    ++ G +   ++   + I+        + D+  + G L  A  L   
Sbjct: 410 TFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGE 469

Query: 519 IP 520
           +P
Sbjct: 470 MP 471



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 32/207 (15%)

Query: 449 AMLQNF--------EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
           A LQN          P  ++ A +      L  L+ G ++H ++L  G+     V + +V
Sbjct: 53  ATLQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMV 112

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
             Y   G +  + S+F+ I     + +  MI  Y  +GF    +AT+  M   G   D  
Sbjct: 113 AFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYF 172

Query: 561 SFISVLYA-----------CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           +F  VL +           C H  ++  G +F             L     ++ L  + G
Sbjct: 173 TFPFVLKSSVELLSVWMGKCVHGLILRIGLQF------------DLYVATSLIILYGKCG 220

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCG 636
            +++A +  + M +  D + W +LL G
Sbjct: 221 EINDAGKVFDNMTIR-DVSSWNALLAG 246


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/735 (35%), Positives = 398/735 (54%), Gaps = 40/735 (5%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           +KL       G  +  R +F  +    +F++N+L+  +S + +     +    +++  ++
Sbjct: 44  TKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLS 103

Query: 196 ADSYTFSCVLK---------CL---AVVG-----------------NSRRVKDAHKLFDE 226
            D++T++  +          CL   AVV                     RV  A K+FD+
Sbjct: 104 PDNFTYAFAISASPDDNLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDK 163

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           + DRD V WN MI+G + N   +  ++VFK+M+  G  +D  T+ TVL   A    +  G
Sbjct: 164 MPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVG 223

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
             +   ALK  F  +      L+ ++SKC D+D A  +F  + +  +VS+ ++I+G++  
Sbjct: 224 MGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCN 283

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G  + A++ FR ++  G       +  ++   +  G L +   +  +  ++       VS
Sbjct: 284 GETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVS 343

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FE 455
            AL  +Y++   +  A  +F++   K + +WN MI           A+ LF  M+   F 
Sbjct: 344 TALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFT 403

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           P+ VT+  IL ACA L AL  G+ +H  I    +  +  V+ A++DMY KCG +  A  L
Sbjct: 404 PNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQL 463

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           FD+   K+ ++W  MI GYG+HG+G +A+  FN+M   G +P  V+F+SVLYACSH+GLV
Sbjct: 464 FDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLV 523

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
            EG   F+ M  +  IEP  EHYACMVD+L R G L +A  FI  MPV P   +WG+LL 
Sbjct: 524 REGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLG 583

Query: 636 GCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
            C IH +  LA   +E +FEL+P N GYYVLL+N+Y+    + +   +RE + +R L K 
Sbjct: 584 ACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKT 643

Query: 696 PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEK 755
           PGC+ IE+ G  ++FV G  SH     I + L+ L  +M+  GY  +T  AL + +E EK
Sbjct: 644 PGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEK 703

Query: 756 EVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNR 815
           E+    HSEKLA+AFG++    G  IR+ KNLRVC DCH   KF+SK   R IV+RD+NR
Sbjct: 704 ELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANR 763

Query: 816 FHHFKDGRCSCRGFW 830
           FHHFKDG CSC  +W
Sbjct: 764 FHHFKDGICSCGDYW 778



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 215/433 (49%), Gaps = 44/433 (10%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           + S LV ++     +   R+VF+K+ +    +WN ++    +   + +S+ +FK M + G
Sbjct: 140 VASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQG 199

Query: 194 IAADSYTFSCVL---------------KCLA-----------------VVGNSRRVKDAH 221
           +  DS T + VL               +CLA                 V      V  A 
Sbjct: 200 VRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTAR 259

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
            LF  +   D+VS+N +ISG+  NG  E  ++ F+E+L  G  V  +TMV ++   +  G
Sbjct: 260 LLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFG 319

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            L     +  F +K+    + S +  L  +YS+  ++D A ++F++  E++V +W +MI+
Sbjct: 320 HLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMIS 379

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           GYA+ G+ + AI LF+ M+     P+   ITSIL ACA  G L  GK VH  IK  +++ 
Sbjct: 380 GYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQ 439

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML 451
           ++YVS AL+DMYAKCG++++A  +F+    K+ V+WNTMI           AL LF  ML
Sbjct: 440 NIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEML 499

Query: 452 Q-NFEPDGVTMACILPACASLAALERGREI-HGYILRHGISADRNVANAIVDMYVKCGVL 509
              F+P  VT   +L AC+    +  G EI H  + ++ I         +VD+  + G L
Sbjct: 500 HLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQL 559

Query: 510 VLARSLFDMIPAK 522
             A      +P +
Sbjct: 560 EKALEFIRKMPVE 572



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/486 (24%), Positives = 219/486 (45%), Gaps = 21/486 (4%)

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE 226
           N L+   SK   F        ++   G   D  T + + + L  VG +R    A  LF  
Sbjct: 9   NTLLALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRH---ARALFFS 65

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMF 285
           +   D+  +N +I G+  +  A   +  +  +L N   + D  T    +S   +      
Sbjct: 66  VPKPDIFLFNVLIKGFSFSPDA-SSISFYTHLLKNTTLSPDNFTYAFAISASPDDN---L 121

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G  +HA A+   F   +   + L+D+Y K   +  A +VF+KM +R  V W +MI G  R
Sbjct: 122 GMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVR 181

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
              +D ++++F+ MV +G+  D   + ++L A A    +++G  +     +       YV
Sbjct: 182 NCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV 241

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE 455
              L+ +++KC  +  A  +F  +   D+VS+N +I           A+  F  +L + +
Sbjct: 242 LTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQ 301

Query: 456 P-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
                TM  ++P  +    L     I G+ ++ G     +V+ A+  +Y +   + LAR 
Sbjct: 302 RVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQ 361

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           LFD    K + +W  MI+GY   G    AI+ F +M      P+ V+  S+L AC+  G 
Sbjct: 362 LFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGA 421

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           +  G     +++ + N+E  +     ++D+ ++ GN+SEA +  ++     +   W +++
Sbjct: 422 LSFGKSVHQLIKSK-NLEQNIYVSTALIDMYAKCGNISEASQLFDLTS-EKNTVTWNTMI 479

Query: 635 CGCRIH 640
            G  +H
Sbjct: 480 FGYGLH 485



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 11/200 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  + + G  E A+ +      ++   +  T  SIL  CA L +L  GK VH +I 
Sbjct: 374 WNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLI- 432

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +S  +  +  + + L+ M+  CG++ E  ++F+         WN ++  Y   G   E+L
Sbjct: 433 KSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEAL 492

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCM 238
            LF +M  LG    S TF  VL   +  G    V++  ++F  + ++  +      + CM
Sbjct: 493 KLFNEMLHLGFQPSSVTFLSVLYACSHAG---LVREGDEIFHAMVNKYRIEPLAEHYACM 549

Query: 239 ISGYIANGVAEKGLEVFKEM 258
           +      G  EK LE  ++M
Sbjct: 550 VDILGRAGQLEKALEFIRKM 569


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 263/720 (36%), Positives = 396/720 (55%), Gaps = 52/720 (7%)

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV-------- 210
           D+  V +WN  +  Y + G   E++  F+ M    +  DS T+  +L  +A         
Sbjct: 258 DDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGK 317

Query: 211 ----------------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                           V NS          V  A ++F ++ + D++SWN +ISG   +G
Sbjct: 318 QIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSG 377

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG-ALMFGRAVHAFALKACFSKEISFN 305
           + E  L +F ++L  G   D  T+ +VL  C++   +   GR VH  ALKA    +   +
Sbjct: 378 LEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVS 437

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
             L+D+YSK G ++ A  +F       + SW +M+ G+     +  A+RLF  M   G +
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
            D     +   A  C   L+ GK +H  + +      L+V + ++DMY KCG M  A  V
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAAL 474
           FNQ+P  D V+W T+I           AL  +  M L   +PD  T A ++ AC+ L AL
Sbjct: 558 FNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTAL 617

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           E+G++IH  I++   + D  V  ++VDMY KCG +  A  LF  +  + +  W  MI G 
Sbjct: 618 EQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGL 677

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
             HG   +A+  FN+M+  G+ PD V+FI VL ACSHSGL  + ++ F+ M+    +EP+
Sbjct: 678 AQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPE 737

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
           +EHY+C+VD LSR G++ EA + +  MP    AT++ +LL  CR+  + +  E+VAE +F
Sbjct: 738 IEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLF 797

Query: 655 ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG 714
            ++P ++  YVLL+N+YA A +WE     R  + R  +KK PG SWI++K KV++FVAG 
Sbjct: 798 TMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGD 857

Query: 715 SSHPHA----KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
            SH        K+E ++KR+    K EGY P T +AL++ +E +KE AL  HSEKLA+A+
Sbjct: 858 RSHEETDLIYNKVEYVMKRI----KEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAY 913

Query: 771 GILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G++  P   T+RV KNLRVCGDCH   K++S   +REIVLRD+NRFHHF+ G CSC  +W
Sbjct: 914 GLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 212/473 (44%), Gaps = 53/473 (11%)

Query: 48  INPISASISKTLVCKTKN----YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCS 101
           +  + A  +K  VC   +    +N  +  + + G   +A++      KS++  D+ TY  
Sbjct: 243 LEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           IL + A L  LE GK++H  +   G   D  V + +  + M+V  G +   RR+F ++  
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGW--DQFVSVANSAINMYVKAGSVNYARRMFGQMKE 360

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------------- 207
             +  WN ++   +++G  + SL LF  +   G+  D +T + VL+              
Sbjct: 361 VDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQ 420

Query: 208 --------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
                               + V     ++++A  LF      D+ SWN M+ G+  +  
Sbjct: 421 VHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDN 480

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
             + L +F  M   G   D  T             L  G+ +HA  +K  F  ++   + 
Sbjct: 481 YREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISG 540

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           +LDMY KCG++  A +VF ++     V+WT++I+G    G  + A+  +  M   G++PD
Sbjct: 541 ILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
            Y   +++ AC+    LE GK +H  I + +     +V  +L+DMYAKCG++ DA  +F 
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFR 660

Query: 428 QMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACA 469
           +M  + +  WN MI           AL+ F  M  +   PD VT   +L AC+
Sbjct: 661 RMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACS 713



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 185/397 (46%), Gaps = 49/397 (12%)

Query: 193 GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD--ELSDRDVVSWNCMISGYIANGV--- 247
           G+  D Y  + ++   A  G+   +  A KLFD    SDRD+V++N +++ Y   G    
Sbjct: 43  GLNPDRYVTNNLITMYAKCGS---LFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHD 99

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTV---LSGCANCGALMFGRAVHAFALKACFSKEISF 304
            EK  E F     L  +V L T  T+      C   G+     A+  +A+K     ++  
Sbjct: 100 VEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFV 159

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
              L+++Y+K   +  A  +F++M  R VV W  M+  Y   G  D  + LF    R G+
Sbjct: 160 AGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGL 219

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
            PD  ++ +IL        + +GK     + E +++         +  YA    + D +S
Sbjct: 220 RPDCVSVRTIL--------MGVGKKT---VFERELEQ--------VRAYATKLFVCDDDS 260

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAA 473
                   D+  WN  +           A+D F  M+++  P D +T   IL   ASL  
Sbjct: 261 --------DVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNH 312

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           LE G++IHG ++R G     +VAN+ ++MYVK G +  AR +F  +   DLISW  +I+G
Sbjct: 313 LELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISG 372

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
               G    ++  F D+ ++G+ PD+ +  SVL ACS
Sbjct: 373 CARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACS 409



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/385 (22%), Positives = 158/385 (41%), Gaps = 70/385 (18%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE--KMGERSVVSWTSMI 340
           L+ G+  HA  + +  + +    N L+ MY+KCG L  A ++F+     +R +V++ +++
Sbjct: 29  LILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAIL 88

Query: 341 AGYAREGVFDG------AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           A YA  G          A  +FR + +  +    + ++ +   C   G     + +  Y 
Sbjct: 89  AAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYA 148

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------L 444
            +  +Q  ++V+ AL+++YAK   + +A  +F++MPV+D+V WN M+ A          L
Sbjct: 149 VKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVL 208

Query: 445 DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            LF A  ++   PD V++  IL         ER  E                        
Sbjct: 209 GLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELE------------------------ 244

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
               V   A  LF      D+  W   ++ Y   G G +A+  F DM ++ +  D +++I
Sbjct: 245 ---QVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYI 301

Query: 564 SVLYACS-----------HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
            +L   +           H  +V  GW  F            +      +++  + G+++
Sbjct: 302 VILSVVASLNHLELGKQIHGAVVRFGWDQF------------VSVANSAINMYVKAGSVN 349

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGC 637
            A R    M    D   W +++ GC
Sbjct: 350 YARRMFGQMKEV-DLISWNTVISGC 373



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 19/213 (8%)

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV- 431
           SIL     D  L +GK  H  I  + +    YV+N L+ MYAKCGS+  A  +F+  P  
Sbjct: 18  SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77

Query: 432 -KDIVSWNTMIG----------------ALDLFVAMLQN-FEPDGVTMACILPACASLAA 473
            +D+V++N ++                 A  +F  + Q+       T++ +   C    +
Sbjct: 78  DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGS 137

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
                 + GY ++ G+  D  VA A+V++Y K   +  AR LFD +P +D++ W +M+  
Sbjct: 138 PSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKA 197

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           Y   G G + +  F+   ++G+ PD VS  ++L
Sbjct: 198 YVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 28/226 (12%)

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA--KDLISWTIMIAGY 534
           G+  H  I+  G++ DR V N ++ MY KCG L  AR LFD+ P   +DL+++  ++A Y
Sbjct: 32  GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91

Query: 535 GMHGFGCD------AIATFNDMRQAGIEPDEVSF-----ISVLYACSHSGLVDEGWRFFN 583
              G   D      A   F  +RQ+ +     +      + +LY    +    +G+    
Sbjct: 92  AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKI 151

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
            ++++  +         +V++ ++   + EA    + MPV  D  +W  ++   + + E+
Sbjct: 152 GLQWDVFVA------GALVNIYAKFQRIREARVLFDRMPVR-DVVLWNVMM---KAYVEM 201

Query: 644 KLAEKV-----AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
              ++V     A H   L PD      +L  V  +     E++++R
Sbjct: 202 GAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVR 247


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/688 (38%), Positives = 393/688 (57%), Gaps = 45/688 (6%)

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +M   G+   +Y  S +L+   V  +   +  A  +F+   + +++ WN M+ G  ++  
Sbjct: 4   QMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSD 63

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
               LE++  M++ G   +  T   +L  CA       GR +HA  +K     +   + +
Sbjct: 64  LVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTS 123

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG-------VFDG--------- 351
           L+ MY++ G L+ A +VF+   +R VVS T++I GYA  G       VFD          
Sbjct: 124 LISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSW 183

Query: 352 ---------------AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
                          A+ LF+ M+R  + PD   + S+L ACA  G +E+G+++H  + +
Sbjct: 184 NAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDD 243

Query: 397 ND-MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           +    SSL + NA + +Y+KCG +  A  +F  +  KD+VSWNT+IG          AL 
Sbjct: 244 HHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALL 303

Query: 446 LFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRH--GISADRNVANAIVDM 502
           LF  ML++ E P+ VTM  +LPACA L A++ GR IH YI +   G++    +  +++DM
Sbjct: 304 LFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDM 363

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG +  A  +F+ +  K L SW  MI G+ MHG    A   F+ MR+ GIEPD+++ 
Sbjct: 364 YAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITL 423

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           + +L ACSHSGL+D G   F  +  + NI PKLEHY CM+DLL   G   EA   I MMP
Sbjct: 424 VGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMP 483

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + PD  IW SLL  C++H  ++LAE  A+ + E+EP+N+G YVLL+N+YA A +WE+V +
Sbjct: 484 MEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVAR 543

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +RE ++ +G+KK PGCS IEI   V+ F+ G   HP +++I  +L+ + + ++  G+ P 
Sbjct: 544 IREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPD 603

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           T   L   +E  KE AL  HSEKLA+AFG+++   G  + V KNLRVC +CHE  K +SK
Sbjct: 604 TSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISK 663

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
             +REIV RD  RFHHF+DG CSC  +W
Sbjct: 664 IYKREIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 227/457 (49%), Gaps = 55/457 (12%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+  +L+ CA  K+ E+G+++H+ + + G  +D     + L+ M+   G L++ R+VF+ 
Sbjct: 85  TFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDR-YAHTSLISMYARNGRLEDARKVFDX 143

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
                V     L+  Y+  G+                                      V
Sbjct: 144 SSQRDVVSCTALITGYASRGD--------------------------------------V 165

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           + A K+FD +++RDVVSWN MI+GY+ N   E+ LE+FKEM+      D  T+V+VLS C
Sbjct: 166 RSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSAC 225

Query: 278 ANCGALMFGRAVHAFA-LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           A  G++  GR +H        F   +   N  + +YSKCGD++ A  +FE +  + VVSW
Sbjct: 226 AQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSW 285

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++I GY    ++  A+ LF+ M+R G  P+   + S+L ACA  G ++IG+ +H YI +
Sbjct: 286 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDK 345

Query: 397 --NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GAL 444
               + +   +  +L+DMYAKCG +  A  VFN M  K + SWN MI           A 
Sbjct: 346 RLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAF 405

Query: 445 DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDM 502
           DLF  M +N  EPD +T+  +L AC+    L+ GR I   + + + I+        ++D+
Sbjct: 406 DLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDL 465

Query: 503 YVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
               G+   A  +  M+P + D + W  ++    MHG
Sbjct: 466 LGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHG 502


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 233/562 (41%), Positives = 350/562 (62%), Gaps = 13/562 (2%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACF-SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +L  C   G +  GR VHA  + + F    +   N +++MY+KCG LD A R+F++M  +
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            +V+WT++IAG+++      A+ LF  M+R G +P+ + ++S+L A   +  L+ G  +H
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
            +  +   QSS+YV +AL+DMYA+CG M  A+  F+ MP K  VSWN +I          
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272

Query: 443 -ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            AL L   M  +NF+P   T + +L ACAS+ ALE+G+ +H ++++ G+     + N ++
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY K G +  A+ +FD +   D++SW  M+ G   HG G + +  F  M + GIEP+E+
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEI 392

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           SF+ VL ACSHSGL+DEG  +F +M+ +  +EP + HY   VDLL R G L  A RFI  
Sbjct: 393 SFLCVLTACSHSGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIRE 451

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ P A +WG+LL  CR+H  ++L    AE  FEL+P ++G  +LL+N+YA A +W +V
Sbjct: 452 MPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDV 511

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            K+R+ +   G+KK P CSW+EI+  V++FVA   +HP  K+I    + +  ++K  GY 
Sbjct: 512 AKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYV 571

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T + L+  D+ E+E  L  HSEKLA+AF +LN P G  IR+ KN+RVCGDCH   KF+
Sbjct: 572 PDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFV 631

Query: 801 SKTARREIVLRDSNRFHHFKDG 822
           SK   REI++RD+NRFH F+DG
Sbjct: 632 SKVVDREIIVRDTNRFHRFRDG 653



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 180/333 (54%), Gaps = 12/333 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + DA ++FDE+  +D+V+W  +I+G+  N      L +F +ML LGF  +  T+ ++L  
Sbjct: 139 LDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKA 198

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
             +   L  G  +HAF LK  +   +   + L+DMY++CG +D A   F+ M  +S VSW
Sbjct: 199 SGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSW 258

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++I+G+AR+G  + A+ L   M R+  +P  +  +S+L ACA  G LE GK VH ++ +
Sbjct: 259 NALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIK 318

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           + ++   ++ N L+DMYAK GS+ DA+ VF+++   D+VSWNTM+            LD 
Sbjct: 319 SGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDR 378

Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  ML+   EP+ ++  C+L AC+    L+ G      + ++ +  D       VD+  +
Sbjct: 379 FEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGR 438

Query: 506 CGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
            G+L  A      +P +   + W  ++    MH
Sbjct: 439 VGLLDRAERFIREMPIEPTAAVWGALLGACRMH 471



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 193/383 (50%), Gaps = 35/383 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D   Y  +L+ C  L  +E G+ VH+ + +S  + +  VL + +V M+  CG L + RR+
Sbjct: 86  DYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRM 145

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-------- 206
           F+++    +  W  L+  +S+    +++L LF +M  LG   + +T S +LK        
Sbjct: 146 FDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGL 205

Query: 207 ---------CL------------AVVGNSRRVK--DAHKL-FDELSDRDVVSWNCMISGY 242
                    CL            A+V    R    DA +L FD +  +  VSWN +ISG+
Sbjct: 206 DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGH 265

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
              G  E  L +  +M    F     T  +VLS CA+ GAL  G+ VHA  +K+   K I
Sbjct: 266 ARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGL-KLI 324

Query: 303 SF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +F  NTLLDMY+K G +D A RVF+++ +  VVSW +M+ G A+ G+    +  F  M+R
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
            GIEP+  +   +L AC+  GLL+ G    + +K+  ++  +      +D+  + G +  
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDR 444

Query: 422 AESVFNQMPVKDIVS-WNTMIGA 443
           AE    +MP++   + W  ++GA
Sbjct: 445 AERFIREMPIEPTAAVWGALLGA 467



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 160/385 (41%), Gaps = 65/385 (16%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  S+L+       L+ G ++H+   + G       +GS LV M+  CG +   +  F+ 
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQ-SSVYVGSALVDMYARCGHMDAAQLAFDG 249

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------------ 205
           +       WN L+  +++ G  + +L+L  KMQ        +T+S VL            
Sbjct: 250 MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQG 309

Query: 206 ------------KCLAVVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                       K +A +GN+          + DA ++FD L   DVVSWN M++G   +
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
           G+ ++ L+ F++ML +G   +  + + VL+ C++ G L  G        K     ++   
Sbjct: 370 GLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHY 429

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            T +D+  + G LD A R   +M  E +   W +++          GA R+ + M     
Sbjct: 430 VTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL----------GACRMHKNM----- 474

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           E  VY         A +   E+  D HD      + S++Y S       AK   M   ES
Sbjct: 475 ELGVY---------AAERAFEL--DPHDS-GPRMLLSNIYASAGRWRDVAKVRKMM-KES 521

Query: 425 VFNQMPVKDIVSWNTMIGALDLFVA 449
              + P     SW  +  A+ LFVA
Sbjct: 522 GVKKQPA---CSWVEIENAVHLFVA 543



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 7/200 (3%)

Query: 439 TMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVAN 497
           T + ALDL      +  PD    + +L  C  L  +E+GR +H +++  H +     + N
Sbjct: 70  TGLYALDLI--QRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQN 127

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
            IV+MY KCG L  AR +FD +P KD+++WT +IAG+  +    DA+  F  M + G +P
Sbjct: 128 IIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQP 187

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNM-MRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           +  +  S+L A      +D G +     ++Y    +  +   + +VD+ +R G++  A  
Sbjct: 188 NHFTLSSLLKASGSEHGLDPGTQLHAFCLKY--GYQSSVYVGSALVDMYARCGHMDAAQL 245

Query: 617 FIEMMPVAPDATIWGSLLCG 636
             + MP   + + W +L+ G
Sbjct: 246 AFDGMPTKSEVS-WNALISG 264


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/763 (35%), Positives = 406/763 (53%), Gaps = 47/763 (6%)

Query: 99  YCSI-LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           +C I L  C  ++  E GK++H ++ + G   +  V  + LV ++   G+L    ++F+ 
Sbjct: 253 FCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNA-LVTLYSRSGNLSSAEQIFHC 311

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +       +N L+   ++ G    +L LFKKM       D  T + +L   A VG     
Sbjct: 312 MSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG 371

Query: 218 KDAHK-------------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
           K  H                    L+ + SD        +  G + N    K  ++F +M
Sbjct: 372 KQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDN--LNKSFQIFTQM 429

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
              G   +  T  ++L  C   GA   G  +H   LK  F   +  ++ L+DMY+K G L
Sbjct: 430 QIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKL 489

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
           D A+++F ++ E  VVSWT+MIAGY +   F  A+ LF+ M  +GI+ D     S + AC
Sbjct: 490 DHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISAC 549

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
           A    L+ G+ +H     +     L + NAL+ +YA+CG + +A + F+Q+  KD VSWN
Sbjct: 550 AGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWN 609

Query: 439 TMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH 487
           +++           AL++F  M +   E +  T    + A A++A +  G++IHG I + 
Sbjct: 610 SLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKT 669

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           G  ++  V+NA++ +Y KCG +             D ISW  MI GY  HG G +A+  F
Sbjct: 670 GYDSETEVSNALITLYAKCGTI-------------DDISWNSMITGYSQHGCGFEALKLF 716

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
            DM+Q  + P+ V+F+ VL ACSH GLVDEG  +F  M    N+ PK EHYAC+VDLL R
Sbjct: 717 EDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGR 776

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
           +G LS A RF+E MP+ PDA +W +LL  C +H  + + E  A H+ ELEP ++  YVL+
Sbjct: 777 SGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLV 836

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLL 727
           +N+YA + KW+   + R+ +  RG+KK PG SW+E+   V+ F AG  +HP A  I   L
Sbjct: 837 SNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYL 896

Query: 728 KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNL 787
           + L       GY P+    L +A+  +K+     HSE+LA+AFG+L+L +   + V KNL
Sbjct: 897 RGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNL 956

Query: 788 RVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           RVC DCH   K +SK   R I++RDS RFHHFK G CSC+ +W
Sbjct: 957 RVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 154/536 (28%), Positives = 243/536 (45%), Gaps = 55/536 (10%)

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
           G KL+  ++  GDL     VF+++    +  WN + + +           LF++M +  +
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNV 159

Query: 195 AADSYTFSCVLK-CLAVVGNSRRVKDAH-------------------------------- 221
             D   F+ VL+ C     + R V+  H                                
Sbjct: 160 EFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAK 219

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           K+F+ L  RD VSW  MISG   NG  E+ + +F ++              VLS C    
Sbjct: 220 KVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVE 265

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
              FG+ +H   LK  FS E    N L+ +YS+ G+L  A ++F  M +R  VS+ S+I+
Sbjct: 266 FFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLIS 325

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           G A++G  + A+ LF+ M  +  +PD   + S+L ACA  G L  GK  H Y  +  M S
Sbjct: 326 GLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTS 385

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAM-LQNFEPDGVT 460
            + V  +L+D+Y KC  +  A   F      D      +  +  +F  M ++   P+  T
Sbjct: 386 DIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLD-----NLNKSFQIFTQMQIEGIVPNQFT 440

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
              IL  C +L A + G +IH  +L+ G   +  V++ ++DMY K G L  A  +F  + 
Sbjct: 441 YPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK 500

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
             D++SWT MIAGY  H    +A+  F +M+  GI+ D + F S + AC+    +D+G R
Sbjct: 501 ENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQG-R 559

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
             +           L     +V L +R G + EAY   + +  A D   W SL+ G
Sbjct: 560 QIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQI-YAKDNVSWNSLVSG 614



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 241/520 (46%), Gaps = 76/520 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +YN+ I    + G + +A+ +    + +  K D  T  S+L  CA + +L +GK+ HS  
Sbjct: 319 SYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYA 378

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G+  D  V GS L+ ++V C D+K     F                 Y +  N  +S
Sbjct: 379 IKAGMTSDIVVEGS-LLDLYVKCSDIKTAHEFFLC---------------YGQLDNLNKS 422

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR--------------------------- 215
             +F +MQ  GI  + +T+  +LK    +G +                            
Sbjct: 423 FQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDM 482

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                ++  A K+F  L + DVVSW  MI+GY  +    + L +FKEM + G   D    
Sbjct: 483 YAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGF 542

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + +S CA   AL  GR +HA +  + +S ++S  N L+ +Y++CG +  A   F+++  
Sbjct: 543 ASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYA 602

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +  VSW S+++G+A+ G F+ A+ +F  M + G+E + +   S + A A    + IGK +
Sbjct: 603 KDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQI 662

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I++    S   VSNAL+ +YAKCG++ D             +SWN+MI         
Sbjct: 663 HGMIRKTGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCG 709

Query: 443 --ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANA 498
             AL LF  M Q +  P+ VT   +L AC+ +  ++ G      +   H +         
Sbjct: 710 FEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYAC 769

Query: 499 IVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           +VD+  + G+L  A+   + +P + D + W  +++   +H
Sbjct: 770 VVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVH 809



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 235/506 (46%), Gaps = 66/506 (13%)

Query: 189 MQSLGIAADSYTFSCVLK-CLAVVGNSRRVKDAHKL----------------FDELSDRD 231
           M+  G+ A+S TF  +L+ CL    NSR   D  KL                FDE+  R 
Sbjct: 72  MEQHGVRANSQTFLWLLEGCL----NSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRS 127

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA-NCGALMFGRAVH 290
           +  WN + + +IA  +  +   +F+ ML      D      VL GC+ N  +  F   +H
Sbjct: 128 LSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIH 187

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
           A  + + F       N L+D+Y K G L  A +VFE +  R  VSW +MI+G ++ G  +
Sbjct: 188 AKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEE 247

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A+ LF  +V              L AC      E GK +H  + +    S  YV NAL+
Sbjct: 248 EAMLLFCQIV--------------LSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALV 293

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGV 459
            +Y++ G+++ AE +F+ M  +D VS+N++I           AL LF  M L   +PD V
Sbjct: 294 TLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCV 353

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           T+A +L ACAS+ AL  G++ H Y ++ G+++D  V  +++D+YVKC  +  A   F   
Sbjct: 354 TVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCY 413

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
              D ++ +  I               F  M+  GI P++ ++ S+L  C+  G  D G 
Sbjct: 414 GQLDNLNKSFQI---------------FTQMQIEGIVPNQFTYPSILKTCTTLGATDLGE 458

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
           +    +  +   +  +   + ++D+ ++ G L  A +    +    D   W +++ G   
Sbjct: 459 QIHTQV-LKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK-ENDVVSWTAMIAGYTQ 516

Query: 640 HHEVKLAEKVAEHVFE--LEPDNTGY 663
           H +   A  + + + +  ++ DN G+
Sbjct: 517 HDKFTEALNLFKEMQDQGIKSDNIGF 542


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/593 (40%), Positives = 356/593 (60%), Gaps = 30/593 (5%)

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK--CGDLDG---AI 322
           A++   L  CA  G    G ++HA A+++    +    N LL++Y K  C  LD    AI
Sbjct: 51  ASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAI 110

Query: 323 --------------RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
                         +VF++M ER VVSW +++ G A EG    A+   R M REG  PD 
Sbjct: 111 VDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDS 170

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           + ++++L   A    ++ G +VH +   N   S ++V ++L+DMYA C     +  VF+ 
Sbjct: 171 FTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDN 230

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG 477
           +PV+D + WN+++           AL +F  MLQ    P  VT + ++P C +LA+L  G
Sbjct: 231 LPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFG 290

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           +++H Y++  G   +  ++++++DMY KCG + +A  +FD + + D++SWT MI GY +H
Sbjct: 291 KQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALH 350

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G   +A+  F  M     +P+ ++F++VL ACSH+GLVD+GW++F  M     I P LEH
Sbjct: 351 GPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEH 410

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           +A + D L R G L EAY FI  M + P A++W +LL  CR+H    LAE+VA+ + ELE
Sbjct: 411 FAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELE 470

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           P + G +V+L+N+Y+ + +W E   LRE + ++G+KK+P CSWIE+K K+++FVA   SH
Sbjct: 471 PRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSH 530

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
           P   +I   L     +M REG+ P T     + +E  K   LCGHSEKLA+ FGI++ PA
Sbjct: 531 PWYDRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPA 590

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G  IRV KNLRVC DCH + KF+SK A REIV+RD+NRFHHFKDG CSC  FW
Sbjct: 591 GTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 179/353 (50%), Gaps = 13/353 (3%)

Query: 198 SYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
           SY  S  +  + V G+S   +   K+FDE+ +RDVVSWN ++ G    G   + L   ++
Sbjct: 101 SYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRK 160

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           M   GF  D  T+ TVL   A C  +  G  VH FA +  F  ++   ++L+DMY+ C  
Sbjct: 161 MCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTR 220

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
            D +++VF+ +  R  + W S++AG A+ G  + A+ +FR M++ G+ P     +S++  
Sbjct: 221 TDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPV 280

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           C     L  GK +H Y+     + ++++S++L+DMY KCG ++ A  +F++M   D+VSW
Sbjct: 281 CGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSW 340

Query: 438 NTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR 486
             MI           AL LF  M L N +P+ +T   +L AC+    +++G +    +  
Sbjct: 341 TAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSN 400

Query: 487 H-GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
           H GI        A+ D   + G L  A +    +  K   S W+ ++    +H
Sbjct: 401 HYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVH 453



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 187/425 (44%), Gaps = 54/425 (12%)

Query: 71  GRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           G FC+  +L   M    ++ +S +   +  + L+ CA L     G  +H++   SG   D
Sbjct: 27  GHFCDAVSLFLRMRA-SAAPRSSVPA-SLPAALKSCAALGLSALGASLHALAIRSGAFAD 84

Query: 131 DGVLGSKL-VFMFVTCGDLKEG-----------------RRVFNKIDNGKVFIWNLLMHE 172
                + L ++  V C  L                    R+VF+++    V  WN L+  
Sbjct: 85  RFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLG 144

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH----------- 221
            ++ G   E+L   +KM   G   DS+T S VL   A   + +R  + H           
Sbjct: 145 CAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSD 204

Query: 222 ---------------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
                                K+FD L  RD + WN +++G   NG  E+ L +F+ ML 
Sbjct: 205 VFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQ 264

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
            G      T  +++  C N  +L FG+ +HA+ +   F   +  +++L+DMY KCG++  
Sbjct: 265 AGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISI 324

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A  +F+KM    VVSWT+MI GYA  G    A+ LF  M     +P+     ++L AC+ 
Sbjct: 325 AHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSH 384

Query: 381 DGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WN 438
            GL++ G K          +  +L    AL D   + G + +A +  ++M +K   S W+
Sbjct: 385 AGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWS 444

Query: 439 TMIGA 443
           T++ A
Sbjct: 445 TLLRA 449



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 128/307 (41%), Gaps = 39/307 (12%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           AE GR  E     + M      E  + D+ T  ++L + A+   ++ G +VH     +G 
Sbjct: 146 AEEGRHHEALGFVRKM----CREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGF 201

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              D  +GS L+ M+  C       +VF+ +      +WN L+   ++ G+ +E+L +F+
Sbjct: 202 -DSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFR 260

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSR-------------------------------- 215
           +M   G+     TFS ++     + + R                                
Sbjct: 261 RMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCG 320

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
            +  AH +FD++S  DVVSW  MI GY  +G A + L +F+ M       +  T + VL+
Sbjct: 321 EISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLT 380

Query: 276 GCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            C++ G +  G +   + +        +     L D   + G+LD A     KM  +   
Sbjct: 381 ACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTA 440

Query: 335 S-WTSMI 340
           S W++++
Sbjct: 441 SVWSTLL 447



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 129/295 (43%), Gaps = 12/295 (4%)

Query: 43  HSSCTINPISASISKTLVCKTKN-YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TY 99
           +++CT    S  +   L  +    +N+ +    + G++E+A+ +     ++ +     T+
Sbjct: 215 YANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTF 274

Query: 100 CSILQLCADLKSLEDGKKVHS-IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
            S++ +C +L SL  GK++H+ +IC  G   D+  + S L+ M+  CG++     +F+K+
Sbjct: 275 SSLIPVCGNLASLRFGKQLHAYVIC--GGFEDNVFISSSLIDMYCKCGEISIAHCIFDKM 332

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
            +  V  W  ++  Y+  G  +E+L LF++M+      +  TF  VL   +  G    V 
Sbjct: 333 SSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAG---LVD 389

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL--EVFKEMLNLGFNVDLATMVTVLSG 276
              K F  +S+   +         +A+ +   G   E +  +  +      +   T+L  
Sbjct: 390 KGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRA 449

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           C      M    V A  +     + I  +  L +MYS  G  + A  + E M ++
Sbjct: 450 CRVHKNTMLAEEV-AKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKK 503


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/609 (40%), Positives = 361/609 (59%), Gaps = 13/609 (2%)

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGF--NVDLATMVTVLSGCANCGALMFGRAVHAF 292
           +N ++  ++  G  E  L +F EML+       D  T    L  C+   AL  GR V A+
Sbjct: 86  YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
           A+K     +    ++L+ MY+ CGD+  A  VF+   E  VV W +++A Y + G +   
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
           + +F+GM+  G+  D   + S++ AC   G  ++GK V  ++ E  +  +  +  ALMDM
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTM 461
           YAKCG +  A  +F+ M  +D+V+W+ MI           AL LF  M L   EP+ VTM
Sbjct: 266 YAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTM 325

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
             +L ACA L ALE G+ +H Y+ R  +S    +  A+VD Y KCG +  A   F+ +P 
Sbjct: 326 VSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPV 385

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           K+  +WT +I G   +G G +A+  F+ MR+AGIEP +V+FI VL ACSHS LV+EG R 
Sbjct: 386 KNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRH 445

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           F+ M  +  I+P++EHY CMVDLL R G + EAY+FI  MP+ P+A IW +LL  C +H 
Sbjct: 446 FDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHR 505

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
            V + E+  + +  L P ++G YVLL+N+YA A +W++   +R+++  RG++K PGCS I
Sbjct: 506 NVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLI 565

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCG 761
           E+ G V  F A  S HP  ++I   ++ +   +K  GY P T    +  +E EKEV++  
Sbjct: 566 ELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSH 625

Query: 762 HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKD 821
           HSEKLA+AFG++ L  G TIR++KNLRVC DCH   K +SK   REIV+RD N FHHFKD
Sbjct: 626 HSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKD 685

Query: 822 GRCSCRGFW 830
           G CSC  +W
Sbjct: 686 GTCSCNDYW 694



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 199/419 (47%), Gaps = 39/419 (9%)

Query: 63  TKNYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKV 118
           T  YN  +  F   G+ E A+    E+L+++     D  T    L+ C+ + +L+ G+ V
Sbjct: 83  TPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGV 142

Query: 119 HSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
            +   + G+V D  VL S L+ M+ +CGD+   R VF+  +   V +WN ++  Y K G+
Sbjct: 143 QAYAVKRGLVADRFVL-SSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGD 201

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR----------------------- 215
           + E + +FK M  +G+A D  T   V+     +G+++                       
Sbjct: 202 WMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTA 261

Query: 216 ---------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                     +  A +LFD +  RDVV+W+ MISGY       + L +F EM       +
Sbjct: 262 LMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPN 321

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             TMV+VLS CA  GAL  G+ VH++  +   S        L+D Y+KCG +D A+  FE
Sbjct: 322 DVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFE 381

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
            M  ++  +WT++I G A  G    A+ LF  M   GIEP       +L AC+   L+E 
Sbjct: 382 SMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEE 441

Query: 387 GKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           G+   D + ++  ++  +     ++D+  + G + +A      MP++ + V W  ++ +
Sbjct: 442 GRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSS 500



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 205/429 (47%), Gaps = 50/429 (11%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIA--ADSYTFSCVLK-----CLAVVGNSRR-- 216
           +N+LM  +   G+ +++L+LF +M     A  AD +T +C LK     C   VG   +  
Sbjct: 86  YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145

Query: 217 -------------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
                                    V  A  +FD   +  VV WN +++ Y+ NG   + 
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           +E+FK ML +G   D  T+V+V++ C   G    G+ V     +   ++       L+DM
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+KCG++  A R+F+ M  R VV+W++MI+GY +      A+ LF  M    +EP+   +
Sbjct: 266 YAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTM 325

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            S+L ACA  G LE GK VH Y++   +  +  +  AL+D YAKCG + DA   F  MPV
Sbjct: 326 VSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPV 385

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           K+  +W  +I           AL+LF +M +   EP  VT   +L AC+    +E GR  
Sbjct: 386 KNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRH 445

Query: 481 HGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH- 537
              + R +GI         +VD+  + G++  A      +P + + + W  +++   +H 
Sbjct: 446 FDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHR 505

Query: 538 --GFGCDAI 544
             G G +A+
Sbjct: 506 NVGIGEEAL 514


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/625 (39%), Positives = 369/625 (59%), Gaps = 12/625 (1%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V  AHK F E+S+ D++ WN +I GY    + +  + ++ +M     + +  T + VL  
Sbjct: 35  VNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKA 94

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C        G+ +H    K  F   +   N+L+ MY+K G +  A  VF+K+ +R+VVSW
Sbjct: 95  CGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSW 154

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           TS+I+GY + G    A+ +F+ M +  ++PD  A+ S++ A      L  GK +H  + +
Sbjct: 155 TSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTK 214

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
             ++    +  +L  MYAK G +  A   FN+M   +++ WN MI           A+ L
Sbjct: 215 LGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKL 274

Query: 447 FVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M+ +N   D +TM   + A A + +LE  R + GYI +     D  V   ++DMY K
Sbjct: 275 FREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAK 334

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           CG + LAR +FD +  KD++ W++MI GYG+HG G +AI  +N+M+QAG+ P++ +FI +
Sbjct: 335 CGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGL 394

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L AC +SGLV EGW  F++M  +  IEP  +HY+C+VDLL R G L++AY FI  MP+ P
Sbjct: 395 LTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKP 453

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
             ++WG+LL  C+IH +V+L E  AE +F L+P NTG+YV L+N+YA A  W  V  +R 
Sbjct: 454 GVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRL 513

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            ++++GL K+ G S IEI G +  F  G  SHP +K+I   L RL   +K  GY P    
Sbjct: 514 MMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMES 573

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L + +  E E  LC HSE+LA+A+GI++   G T+R+TKNLR C +CH   K +SK   
Sbjct: 574 VLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVD 633

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REI++RD+ RFHHFKDG CSC  FW
Sbjct: 634 REIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 203/436 (46%), Gaps = 44/436 (10%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           GD+    + F ++    + +WN ++  Y++       + ++  MQ   +  + +TF  VL
Sbjct: 33  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92

Query: 206 KCLA------------------------VVGNSR--------RVKDAHKLFDELSDRDVV 233
           K                            V NS         ++  A  +FD+L DR VV
Sbjct: 93  KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           SW  +ISGY+ NG   + L VFKEM       D   +V+V++   N   L  G+++H   
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
            K     E     +L  MY+K G ++ A   F +M + +++ W +MI+GYA  G  + AI
Sbjct: 213 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 272

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
           +LFR M+ + I  D   + S + A A  G LE+ + +  YI +++ +   +V+  L+DMY
Sbjct: 273 KLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMY 332

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMA 462
           AKCGS+  A  VF+++  KD+V W+ MI           A+ L+  M Q    P+  T  
Sbjct: 333 AKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFI 392

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            +L AC +   ++ G E+   +  HGI       + +VD+  + G L  A      +P K
Sbjct: 393 GLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 452

Query: 523 DLIS-WTIMIAGYGMH 537
             +S W  +++   +H
Sbjct: 453 PGVSVWGALLSACKIH 468



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/313 (20%), Positives = 135/313 (43%), Gaps = 36/313 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ + I  + + G+  +A+ V     +  +  D     S++    +++ L  GK +H ++
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+  +  ++ S L  M+   G ++  R  FN+++   + +WN ++  Y+  G  +E+
Sbjct: 213 TKLGLEFEPDIVIS-LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 271

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG------------NSRRVKD----------- 219
           + LF++M +  I  DS T    +   A VG            +    +D           
Sbjct: 272 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 331

Query: 220 ---------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                    A  +FD ++D+DVV W+ MI GY  +G  ++ + ++ EM   G   +  T 
Sbjct: 332 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF 391

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           + +L+ C N G +  G  +                + ++D+  + G L+ A      M  
Sbjct: 392 IGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 451

Query: 331 RSVVS-WTSMIAG 342
           +  VS W ++++ 
Sbjct: 452 KPGVSVWGALLSA 464


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/782 (34%), Positives = 427/782 (54%), Gaps = 49/782 (6%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D+ T   +L+ C  +     G+++H +  + G    +   G+ LV M++ CG + EG  
Sbjct: 97  VDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIE 156

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG- 212
           VF  +    V  W  L+   +      E + LF +M++ GI  + +TF+ VL  +A  G 
Sbjct: 157 VFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGA 216

Query: 213 -------NSRRVK------------------------DAHKLFDELSDRDVVSWNCMISG 241
                  +++ VK                        DA  +F+ +  RD+VSWN +++G
Sbjct: 217 LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG 276

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
              N    + L++F E       +  +T  TV+  CAN   L   R +H+  LK  F   
Sbjct: 277 LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLT 336

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFE-KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            +    L D YSKCG+L  A+ +F    G R+VVSWT++I+G  + G    A+ LF  M 
Sbjct: 337 GNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMR 396

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
            + + P+ +  +++L A     L  +   +H  + + + Q   +V  AL+  Y+K GS  
Sbjct: 397 EDRVMPNEFTYSAMLKA----SLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTE 452

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACA 469
           DA S+F  +  KD+V+W+ M+          GA  LF  M +Q  +P+  T++ ++ ACA
Sbjct: 453 DALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACA 512

Query: 470 SLAA-LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
             +A +++GR+ H   +++       V++A+V MY + G +  A+ +F+    +DL+SW 
Sbjct: 513 CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWN 572

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI+GY  HG+   AI TF  M  +GI+ D V+F++V+  C+H+GLV EG ++F+ M  +
Sbjct: 573 SMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRD 632

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             I P +EHYACMVDL SR G L E    I  MP    A +W +LL  CR+H  V+L + 
Sbjct: 633 HKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKF 692

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            A+ +  LEP ++  YVLL+N+YA A KW+E  ++R+ +  R +KK  GCSWI+IK KV+
Sbjct: 693 SADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVH 752

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            F+A   SHP + +I   LK +   +K++GY P T + L +  E +KE  L  HSE+LA+
Sbjct: 753 SFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLAL 812

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           AFG++  P G  +++ KNLRVCGDCH + K +S    REI++RD +RFHHF  G CSC  
Sbjct: 813 AFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGD 872

Query: 829 FW 830
           FW
Sbjct: 873 FW 874



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 235/520 (45%), Gaps = 52/520 (10%)

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---------------CLAV- 210
           N ++ +Y++ G   E L  F   +  G+  DS T SCVLK               CL V 
Sbjct: 68  NRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127

Query: 211 VGNSR-----------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
            G+ R                  V +  ++F+ +  ++VV+W  +++G     +  + + 
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           +F  M   G   +  T  +VLS  A+ GAL  G+ VHA ++K      +   N+L++MY+
Sbjct: 188 LFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYA 247

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
           KCG ++ A  VF  M  R +VSW +++AG         A++LF        +       +
Sbjct: 248 KCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYAT 307

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VK 432
           ++  CA    L + + +H  + ++    +  V  AL D Y+KCG +ADA ++F+     +
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR 367

Query: 433 DIVSWNTMI------GALDLFVAMLQNFEPDGV-----TMACILPACASLAALERGREIH 481
           ++VSW  +I      G + L V +      D V     T + +L A  S+       +IH
Sbjct: 368 NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQIH 423

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
             +++        V  A++  Y K G    A S+F MI  KD+++W+ M++ +   G   
Sbjct: 424 AQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCE 483

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACS-HSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
            A   FN M   GI+P+E +  SV+ AC+  S  VD+G R F+ +  +      +   + 
Sbjct: 484 GATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQG-RQFHAISIKYRYHDAICVSSA 542

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           +V + SR GN+  A    E      D   W S++ G   H
Sbjct: 543 LVSMYSRKGNIDSAQIVFERQ-TDRDLVSWNSMISGYAQH 581



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 194/397 (48%), Gaps = 35/397 (8%)

Query: 81  KAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           +A+++ + S  +  K+   TY ++++LCA+LK L   +++HS + + G  +   V+ + L
Sbjct: 285 EALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM-TAL 343

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGK-VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
              +  CG+L +   +F+     + V  W  ++    + G+   ++ LF +M+   +  +
Sbjct: 344 ADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403

Query: 198 SYTFSCVLKC----------------------------LAVVGNSRRVKDAHKLFDELSD 229
            +T+S +LK                             LA        +DA  +F  +  
Sbjct: 404 EFTYSAMLKASLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQ 463

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA-LMFGRA 288
           +DVV+W+ M+S +   G  E    +F +M   G   +  T+ +V+  CA   A +  GR 
Sbjct: 464 KDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQ 523

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
            HA ++K  +   I  ++ L+ MYS+ G++D A  VFE+  +R +VSW SMI+GYA+ G 
Sbjct: 524 FHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGY 583

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD-YIKENDMQSSLYVSN 407
              AI  FR M   GI+ D     +++  C  +GL+  G+   D  ++++ +  ++    
Sbjct: 584 SMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYA 643

Query: 408 ALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            ++D+Y++ G + +  S+   MP     + W T++GA
Sbjct: 644 CMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA 680



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 167/355 (47%), Gaps = 38/355 (10%)

Query: 317 DLDGAIRVFEKMGER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           D  GA    +++  R + V    ++  YAR G+    +  F    R G+  D   ++ +L
Sbjct: 47  DPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVL 106

Query: 376 HACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
            AC       +G+ +H   +K    +  +    +L+DMY KCGS+ +   VF  MP K++
Sbjct: 107 KACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNV 166

Query: 435 VSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGY 483
           V+W +++            + LF  M  +   P+  T A +L A AS  AL+ G+ +H  
Sbjct: 167 VTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQ 226

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
            ++ G  +   V N++++MY KCG++  A+S+F+ +  +D++SW  ++AG  ++    +A
Sbjct: 227 SVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEA 286

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACS-----------HSGLVDEGWRFF-NMMRYECNI 591
           +  F++ R    +  + ++ +V+  C+           HS ++  G+    N+M      
Sbjct: 287 LQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM------ 340

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
                    + D  S+ G L++A     M   + +   W +++ GC  + ++ LA
Sbjct: 341 -------TALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/625 (39%), Positives = 369/625 (59%), Gaps = 12/625 (1%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V  AHK F E+S+ D++ WN +I GY    + +  + ++ +M     + +  T + VL  
Sbjct: 50  VNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKA 109

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C        G+ +H    K  F   +   N+L+ MY+K G +  A  VF+K+ +R+VVSW
Sbjct: 110 CGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSW 169

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           TS+I+GY + G    A+ +F+ M +  ++PD  A+ S++ A      L  GK +H  + +
Sbjct: 170 TSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTK 229

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
             ++    +  +L  MYAK G +  A   FN+M   +++ WN MI           A+ L
Sbjct: 230 LGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKL 289

Query: 447 FVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M+ +N   D +TM   + A A + +LE  R + GYI +     D  V   ++DMY K
Sbjct: 290 FREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAK 349

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           CG + LAR +FD +  KD++ W++MI GYG+HG G +AI  +N+M+QAG+ P++ +FI +
Sbjct: 350 CGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGL 409

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L AC +SGLV EGW  F++M  +  IEP  +HY+C+VDLL R G L++AY FI  MP+ P
Sbjct: 410 LTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKP 468

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
             ++WG+LL  C+IH +V+L E  AE +F L+P NTG+YV L+N+YA A  W  V  +R 
Sbjct: 469 GVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRL 528

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            ++++GL K+ G S IEI G +  F  G  SHP +K+I   L RL   +K  GY P    
Sbjct: 529 MMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMES 588

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L + +  E E  LC HSE+LA+A+GI++   G T+R+TKNLR C +CH   K +SK   
Sbjct: 589 VLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVD 648

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REI++RD+ RFHHFKDG CSC  FW
Sbjct: 649 REIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 203/436 (46%), Gaps = 44/436 (10%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           GD+    + F ++    + +WN ++  Y++       + ++  MQ   +  + +TF  VL
Sbjct: 48  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107

Query: 206 KCLA------------------------VVGNSR--------RVKDAHKLFDELSDRDVV 233
           K                            V NS         ++  A  +FD+L DR VV
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 167

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           SW  +ISGY+ NG   + L VFKEM       D   +V+V++   N   L  G+++H   
Sbjct: 168 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 227

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
            K     E     +L  MY+K G ++ A   F +M + +++ W +MI+GYA  G  + AI
Sbjct: 228 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 287

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
           +LFR M+ + I  D   + S + A A  G LE+ + +  YI +++ +   +V+  L+DMY
Sbjct: 288 KLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMY 347

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMA 462
           AKCGS+  A  VF+++  KD+V W+ MI           A+ L+  M Q    P+  T  
Sbjct: 348 AKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFI 407

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            +L AC +   ++ G E+   +  HGI       + +VD+  + G L  A      +P K
Sbjct: 408 GLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 467

Query: 523 DLIS-WTIMIAGYGMH 537
             +S W  +++   +H
Sbjct: 468 PGVSVWGALLSACKIH 483



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/313 (20%), Positives = 135/313 (43%), Gaps = 36/313 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ + I  + + G+  +A+ V     +  +  D     S++    +++ L  GK +H ++
Sbjct: 168 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 227

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+  +  ++ S L  M+   G ++  R  FN+++   + +WN ++  Y+  G  +E+
Sbjct: 228 TKLGLEFEPDIVIS-LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 286

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG------------NSRRVKD----------- 219
           + LF++M +  I  DS T    +   A VG            +    +D           
Sbjct: 287 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 346

Query: 220 ---------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                    A  +FD ++D+DVV W+ MI GY  +G  ++ + ++ EM   G   +  T 
Sbjct: 347 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF 406

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           + +L+ C N G +  G  +                + ++D+  + G L+ A      M  
Sbjct: 407 IGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 466

Query: 331 RSVVS-WTSMIAG 342
           +  VS W ++++ 
Sbjct: 467 KPGVSVWGALLSA 479


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/611 (40%), Positives = 366/611 (59%), Gaps = 14/611 (2%)

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           +VV+W  +I+    +    + L  F  M   G   +  T   +L  CA+   L  G+ +H
Sbjct: 164 NVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIH 223

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
           A   K CF  +      LLDMY+KCG +  A  VF++M  R++VSW SMI G+ +  ++ 
Sbjct: 224 ALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYG 283

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            AI +FR ++  G  PD  +I+S+L ACA    L+ GK VH  I +  +   +YV N+L+
Sbjct: 284 RAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLV 341

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGV 459
           DMY KCG   DA  +F     +D+V+WN MI           A   F AM+ +  EPD  
Sbjct: 342 DMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEA 401

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           + + +  A AS+AAL +G  IH ++L+ G   +  +++++V MY KCG ++ A  +F   
Sbjct: 402 SYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRET 461

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
              +++ WT MI  +  HG   +AI  F +M   G+ P+ ++F+SVL ACSH+G +D+G+
Sbjct: 462 KEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGF 521

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
           ++FN M    NI+P LEHYACMVDLL R G L EA RFIE MP  PD+ +WG+LL  C  
Sbjct: 522 KYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGK 581

Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
           H  V++  +VAE +F+LEPDN G Y+LL+N+Y      EE  ++R  +   G++K  GCS
Sbjct: 582 HANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCS 641

Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
           WI++K +  +F A   SH   ++I  +L++L+  +KR GY  +T++A  N+ E  +E +L
Sbjct: 642 WIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFA-TNSVEGSEEQSL 700

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
             HSEKLA+AFG+L LP G  +R+ KNLR CGDCH + KF S+  +REI++RD NRFH F
Sbjct: 701 WCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRF 760

Query: 820 KDGRCSCRGFW 830
            +G CSC  +W
Sbjct: 761 TNGSCSCMDYW 771



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 224/484 (46%), Gaps = 50/484 (10%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN- 160
           +L   A LKSL+   ++HS +  +        + + L+ ++  CG +     +FN   + 
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINT-LLLLYAKCGSIHHTLLLFNTYPHP 161

Query: 161 -GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
              V  W  L+++ S++    ++L  F +M++ GI  + +TFS +L   A        + 
Sbjct: 162 STNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQ 221

Query: 220 AHKL--------------------------------FDELSDRDVVSWNCMISGYIANGV 247
            H L                                FDE+  R++VSWN MI G++ N +
Sbjct: 222 IHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKL 281

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
             + + VF+E+L+LG   D  ++ +VLS CA    L FG+ VH   +K      +   N+
Sbjct: 282 YGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNS 339

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L+DMY KCG  + A ++F   G+R VV+W  MI G  R   F+ A   F+ M+REG+EPD
Sbjct: 340 LVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPD 399

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
             + +S+ HA A    L  G  +H ++ +     +  +S++L+ MY KCGSM DA  VF 
Sbjct: 400 EASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFR 459

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALER 476
           +    ++V W  MI           A+ LF  ML +   P+ +T   +L AC+    ++ 
Sbjct: 460 ETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDD 519

Query: 477 GREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGY 534
           G +    +   H I         +VD+  + G L  A    + +P   D + W  ++   
Sbjct: 520 GFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGAC 579

Query: 535 GMHG 538
           G H 
Sbjct: 580 GKHA 583



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 203/447 (45%), Gaps = 64/447 (14%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ +IL  CA    L +G+++H++I      ++D  + + L+ M+  CG +     VF++
Sbjct: 202 TFSAILPACAHAALLSEGQQIHALI-HKHCFLNDPFVATALLDMYAKCGSMLLAENVFDE 260

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---------- 207
           + +  +  WN ++  + K   +  ++ +F+++ SLG   D  + S VL            
Sbjct: 261 MPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFG 318

Query: 208 --------------LAVVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                         L  V NS           +DA KLF    DRDVV+WN MI G    
Sbjct: 319 KQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRC 378

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
              E+    F+ M+  G   D A+  ++    A+  AL  G  +H+  LK    K    +
Sbjct: 379 RNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRIS 438

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           ++L+ MY KCG +  A +VF +  E +VV WT+MI  + + G  + AI+LF  M+ EG+ 
Sbjct: 439 SSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVV 498

Query: 366 PDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           P+     S+L AC+  G ++ G K  +     ++++  L     ++D+  + G + +A  
Sbjct: 499 PEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACR 558

Query: 425 VFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYI 484
               MP                       FEPD +    +L AC   A +E GRE+   +
Sbjct: 559 FIESMP-----------------------FEPDSLVWGALLGACGKHANVEMGREVAERL 595

Query: 485 LRHGISADRNVANAIV--DMYVKCGVL 509
            +  +  D N  N ++  ++Y++ G+L
Sbjct: 596 FK--LEPD-NPGNYMLLSNIYIRHGML 619



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 151/346 (43%), Gaps = 62/346 (17%)

Query: 62  KTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           K K Y   IG F EV +L               D  +  S+L  CA L  L+ GK+VH  
Sbjct: 278 KNKLYGRAIGVFREVLSLGP-------------DQVSISSVLSACAGLVELDFGKQVHGS 324

Query: 122 ICESGIVIDDGVLGSK--LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
           I + G+V   G++  K  LV M+  CG  ++  ++F    +  V  WN+++    +  NF
Sbjct: 325 IVKRGLV---GLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNF 381

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG-------------------NSR----- 215
           +++   F+ M   G+  D  ++S +    A +                    NSR     
Sbjct: 382 EQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSL 441

Query: 216 --------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                    + DA+++F E  + +VV W  MI+ +  +G A + +++F+EMLN G   + 
Sbjct: 442 VTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEY 501

Query: 268 ATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
            T V+VLS C++ G +  G +  ++ A        +     ++D+  + G L+ A R  E
Sbjct: 502 ITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIE 561

Query: 327 KMG-ERSVVSWTSMIAGYAREGVFDG----AIRLFRGMVREGIEPD 367
            M  E   + W +++    +    +     A RLF+      +EPD
Sbjct: 562 SMPFEPDSLVWGALLGACGKHANVEMGREVAERLFK------LEPD 601



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 10/265 (3%)

Query: 432 KDIVSWNTMIGALDLFVAMLQNFE--PDGVTMACILPACASLAALERGREIHGYILRHGI 489
           +++  W  +  +    V     F   PD   +  +L   A L +L+   +IH  ++    
Sbjct: 72  REVAFWLQLFTSYQSGVPKFHQFSSVPD---LKHLLNNAAKLKSLKHATQIHSQLVTTNN 128

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIP--AKDLISWTIMIAGYGMHGFGCDAIATF 547
            A     N ++ +Y KCG +     LF+  P  + ++++WT +I           A+  F
Sbjct: 129 HASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFF 188

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
           N MR  GI P+  +F ++L AC+H+ L+ EG +   ++   C +       A ++D+ ++
Sbjct: 189 NRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATA-LLDMYAK 247

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            G++  A    + MP   +   W S++ G   +     A  V   V  L PD      +L
Sbjct: 248 CGSMLLAENVFDEMP-HRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVL 306

Query: 668 ANVYAEAEKWEEVKKLREKISRRGL 692
           +      E  +  K++   I +RGL
Sbjct: 307 SACAGLVE-LDFGKQVHGSIVKRGL 330



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 104/246 (42%), Gaps = 15/246 (6%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E  + D  +Y S+    A + +L  G  +HS + ++G V  +  + S LV M+  CG + 
Sbjct: 394 EGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHV-KNSRISSSLVTMYGKCGSML 452

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
           +  +VF +     V  W  ++  + + G   E++ LF++M + G+  +  TF  VL   +
Sbjct: 453 DAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACS 512

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
             G   ++ D  K F+ +++   +      + CM+      G  E+     + M    F 
Sbjct: 513 HTG---KIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESM---PFE 566

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL-DMYSKCGDLDGAIR 323
            D      +L  C     +  GR V     K     +   N  LL ++Y + G L+ A  
Sbjct: 567 PDSLVWGALLGACGKHANVEMGREVAERLFK--LEPDNPGNYMLLSNIYIRHGMLEEADE 624

Query: 324 VFEKMG 329
           V   MG
Sbjct: 625 VRRLMG 630


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 276/738 (37%), Positives = 405/738 (54%), Gaps = 57/738 (7%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D V  +K +   +  G      RVFN +       +N ++  Y +   F  +  LF KM 
Sbjct: 45  DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
              +      FS  +     V N RR+ +AHKLFD +  +DVVSWN M+SGY  NG  ++
Sbjct: 105 ERDL------FSWNVMLTGYVRN-RRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDE 157

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
             EVF +M +     +  +   +L+   + G L   R +     ++  + E+   N L+ 
Sbjct: 158 AREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRL----FESQSNWELISWNCLMG 209

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
            Y K   L  A ++F++M  R V+SW +MI+GYA+ G    A RLF     E    DV+ 
Sbjct: 210 GYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFN----ESPIRDVFT 265

Query: 371 ITSILHACACDGLLEIGKDVHD----------------YIKENDM--QSSLYVS------ 406
            T+++     +G+++  +   D                Y++   M     L+ +      
Sbjct: 266 WTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNI 325

Query: 407 ---NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN 453
              N ++  Y + G +A A  +F+ MP +D VSW  +I           AL++FV M ++
Sbjct: 326 SSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRD 385

Query: 454 FEPDG-VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
            E     T +C L  CA +AALE G+++HG +++ G      V NA++ MY KCG    A
Sbjct: 386 GESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEA 445

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +F+ I  KD++SW  MIAGY  HGFG  A+  F  M++AG++PDE++ + VL ACSHS
Sbjct: 446 NDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHS 505

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           GL+D G  +F  M  + N++P  +HY CM+DLL R G L EA   +  MP  P A  WG+
Sbjct: 506 GLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGA 565

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           LL   RIH   +L EK AE VF++EP N+G YVLL+N+YA + +W +V K+R K+   G+
Sbjct: 566 LLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGV 625

Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 752
           +K  G SW+E++ K++ F  G   HP   +I + L+ L L+M+REGY   T+  L + +E
Sbjct: 626 QKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEE 685

Query: 753 MEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRD 812
            EKE  L  HSEKLA+AFGIL +PAG+ IRV KNLRVC DCH   K +SK   R I+LRD
Sbjct: 686 EEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRD 745

Query: 813 SNRFHHFKDGRCSCRGFW 830
           S+RFHHF +G CSC  +W
Sbjct: 746 SHRFHHFSEGICSCGDYW 763



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 165/341 (48%), Gaps = 26/341 (7%)

Query: 129 IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
           + D +  + ++  +   GDL + +R+FN+     VF W  ++  Y + G   E+   F +
Sbjct: 229 VRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDE 288

Query: 189 M------------------QSLGIAADSY------TFSCVLKCLAVVGNSRRVKDAHKLF 224
           M                  + + IA + +        S     +   G +  +  A KLF
Sbjct: 289 MPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLF 348

Query: 225 DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALM 284
           D +  RD VSW  +ISGY  NG  E+ L +F EM   G + + +T    LS CA+  AL 
Sbjct: 349 DMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALE 408

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            G+ VH   +KA F       N LL MY KCG  D A  VFE + E+ VVSW +MIAGYA
Sbjct: 409 LGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYA 468

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD-VHDYIKENDMQSSL 403
           R G    A+ LF  M + G++PD   +  +L AC+  GL++ G +  +   ++ +++ + 
Sbjct: 469 RHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTS 528

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKD-IVSWNTMIGA 443
                ++D+  + G + +AE++   MP      SW  ++GA
Sbjct: 529 KHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGA 569



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 135/557 (24%), Positives = 230/557 (41%), Gaps = 97/557 (17%)

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
           +  D D+V+WN  IS ++ NG  +  L VF  M     +V    M+   SG         
Sbjct: 40  KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRS-SVSYNAMI---SGYLRNAKFSL 95

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
            R +          +++   N +L  Y +   L  A ++F+ M ++ VVSW +M++GYA+
Sbjct: 96  ARDL----FDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQ 151

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G  D A  +F  M       +  +   +L A   +G L+  + +     E+     L  
Sbjct: 152 NGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLF----ESQSNWELIS 203

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL----DLFVA-MLQNFEP--DG 458
            N LM  Y K   + DA  +F++MPV+D++SWNTMI       DL  A  L N  P  D 
Sbjct: 204 WNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDV 263

Query: 459 VTMACILPACASLAALERGRE----------------IHGYIL--RHGISAD-------R 493
            T   ++        ++  R+                + GY+   +  I+ +       R
Sbjct: 264 FTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCR 323

Query: 494 NVA--NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           N++  N ++  Y + G +  AR LFDM+P +D +SW  +I+GY  +G   +A+  F +M+
Sbjct: 324 NISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMK 383

Query: 552 QAGIEPDEVSFISVLYACS-----------HSGLVDEGWR---FFNM----MRYEC---- 589
           + G   +  +F   L  C+           H  +V  G+    F       M ++C    
Sbjct: 384 RDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTD 443

Query: 590 -------NIEPK-LEHYACMVDLLSRTGNLSEAYRFIEMMP---VAPDATIWGSLLCGCR 638
                   IE K +  +  M+   +R G   +A    E M    V PD      +L  C 
Sbjct: 444 EANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSAC- 502

Query: 639 IHHEVKLAEKVAEHVFELEPD-----NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
                 L ++  E+ + ++ D      + +Y  + ++   A + EE + L      R + 
Sbjct: 503 --SHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENL-----MRNMP 555

Query: 694 KNPG-CSWIEIKGKVNI 709
            +PG  SW  + G   I
Sbjct: 556 FDPGAASWGALLGASRI 572



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 20/232 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G+ E+A+ +    ++     +  T+   L  CAD+ +LE GK+VH  +
Sbjct: 358 SWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQV 417

Query: 123 CESGIVIDDG-VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            ++G   + G  +G+ L+ M+  CG   E   VF  I+   V  WN ++  Y++ G  ++
Sbjct: 418 VKAG--FETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQ 475

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS--WNCMI 239
           +L LF+ M+  G+  D  T   VL   +  G   R  +     D   +    S  + CMI
Sbjct: 476 ALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMI 535

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
                 G A +  E    M N+ F+           G A+ GAL+    +H 
Sbjct: 536 DLL---GRAGRLEEAENLMRNMPFD----------PGAASWGALLGASRIHG 574


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/789 (33%), Positives = 423/789 (53%), Gaps = 44/789 (5%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID-DGVLGSKLVFMFVT 144
           L S    K+D+     +LQ C        G+ VH+ + + G V   D    + L+ ++  
Sbjct: 37  LASLALPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAK 96

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
            G L   RR+F+ +    +  +  L+  Y+  G F+E+  LF+++Q  G   + +  + +
Sbjct: 97  LGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTI 156

Query: 205 LKCL------------------------AVVGNSR--------RVKDAHKLFDELSDRDV 232
           LK L                        A VG+S          V  A  +FD +  +D 
Sbjct: 157 LKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDA 216

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           V+W  M+S Y  N + E  L  F +M   G   +   + +VL       + + G+ +H  
Sbjct: 217 VTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGC 276

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
           A+K     E      LLDMY+KCG ++ A  VFE +    V+ W+ +I+ YA+    + A
Sbjct: 277 AVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQA 336

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
             +F  M+R  + P+ ++++ +L ACA    L++G+ +H+ + +   +S L+V NALMD+
Sbjct: 337 FEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDV 396

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTM 461
           YAKC +M ++  +F  +   + VSWNT+I           AL +F  M   +     VT 
Sbjct: 397 YAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTF 456

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
           + +L ACA+ A+++   +IH  I +   + D  V N+++D Y KCG +  A  +F+ I  
Sbjct: 457 SSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQ 516

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
            D++SW  +I+GY +HG   DA+  FN M ++  +P++V+F+++L  C  +GLV++G   
Sbjct: 517 CDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSL 576

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           FN M  +  I+P ++HY C+V LL R G L++A +FI  +P  P   +W +LL  C +H 
Sbjct: 577 FNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHK 636

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
            V L +  AE V E+EP +   YVLL+N+YA A   ++V  LR+ +   G+KK  G SW+
Sbjct: 637 NVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWV 696

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCG 761
           EIKG+V+ F  G + HP  + I ++L+ L L+  REGY P     L + DE EK   L  
Sbjct: 697 EIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWV 756

Query: 762 HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKD 821
           HSE+LA+A+G+   P G  IR+ KNLR C DCH + K +SK  +REIV+RD NRFHHF +
Sbjct: 757 HSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDE 816

Query: 822 GRCSCRGFW 830
           G CSC  +W
Sbjct: 817 GICSCGDYW 825


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 270/781 (34%), Positives = 443/781 (56%), Gaps = 45/781 (5%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D+ +Y ++LQ     +    GK +H  I + G  +D     + L+  +V  G L++  +
Sbjct: 1   MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLD-LFAQNILLNTYVHFGFLEDASK 59

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------- 206
           +F+++       +  L   +S++  F+ +  L  ++   G   + + F+ +LK       
Sbjct: 60  LFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDL 119

Query: 207 ---CLAV--------------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISG 241
              CL+V              VG +          V  A ++FD +  +D+VSW  M++ 
Sbjct: 120 ADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVAC 179

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y  N   E  L +F +M  +G+  +  T+   L  C    A   G++VH  ALK C+ ++
Sbjct: 180 YAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRD 239

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +     LL++Y+K G++  A + FE+M +  ++ W+ MI+ YA+      A+ LF  M +
Sbjct: 240 LYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQ 299

Query: 362 EGIE-PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
             +  P+ +   S+L ACA   LL +G  +H  + +  + S+++VSNALMD+YAKCG + 
Sbjct: 300 SSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIE 359

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACA 469
           ++  +F     K+ V+WNT+I           AL+LF  ML  + +P  VT + +L A A
Sbjct: 360 NSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASA 419

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           SL ALE GR+IH   ++   + D  VAN+++DMY KCG +  AR  FD +  +D +SW  
Sbjct: 420 SLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNA 479

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           +I GY +HG G +A+  F+ M+Q+  +P++++F+ VL ACS++GL+D+G   F  M  + 
Sbjct: 480 LICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDY 539

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            IEP +EHY CMV LL R+G   EA + I  +P  P   +W +LL  C IH  + L +  
Sbjct: 540 GIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVC 599

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           A+ V E+EP +   +VLL+N+YA A++W+ V  +R+ + ++ +KK PG SW+E +G V+ 
Sbjct: 600 AQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHY 659

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F  G +SHP+ K I ++L+ L  + +  GY P     L++ ++ EKE  L  HSE+LA+A
Sbjct: 660 FTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALA 719

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           FG++ +P+G +IR+ KNLR+C DCH + K +SK  +REIV+RD NRFHHF+ G CSC  +
Sbjct: 720 FGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDY 779

Query: 830 W 830
           W
Sbjct: 780 W 780



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 213/433 (49%), Gaps = 45/433 (10%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E  +++   + ++L+L   +   +    VH+ + + G   D   +G+ L+  +  CG++ 
Sbjct: 98  EGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQAD-AFVGTALIDAYSVCGNVD 156

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-- 207
             R+VF+ I    +  W  ++  Y++    ++SL LF +M+ +G   +++T S  LK   
Sbjct: 157 AARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCN 216

Query: 208 ------------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNC 237
                                         L +   S  + +A + F+E+   D++ W+ 
Sbjct: 217 GLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSL 276

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGRAVHAFALKA 296
           MIS Y  +  +++ LE+F  M      V +  T  +VL  CA+   L  G  +H+  LK 
Sbjct: 277 MISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKV 336

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
                +  +N L+D+Y+KCG+++ ++++F    E++ V+W ++I GY + G  + A+ LF
Sbjct: 337 GLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLF 396

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M+   I+P     +S+L A A    LE G+ +H    +        V+N+L+DMYAKC
Sbjct: 397 SNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKC 456

Query: 417 GSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACIL 465
           G + DA   F++M  +D VSWN +I           AL+LF  M Q N +P+ +T   +L
Sbjct: 457 GRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVL 516

Query: 466 PACASLAALERGR 478
            AC++   L++GR
Sbjct: 517 SACSNAGLLDKGR 529



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 148/355 (41%), Gaps = 71/355 (20%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI---DTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           I R+ +    ++A+E+     +S +   +  T+ S+LQ CA L  L  G ++HS + + G
Sbjct: 278 ISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVG 337

Query: 127 IVIDDGVLGSK-LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
           +  D  V  S  L+ ++  CG+++   ++F          WN ++  Y + G+ +++L L
Sbjct: 338 L--DSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNL 395

Query: 186 FKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR------ 215
           F  M  L I     T+S VL+  A                        VV NS       
Sbjct: 396 FSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAK 455

Query: 216 --RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
             R+ DA   FD++  +D VSWN +I GY  +G+  + L +F  M       +  T V V
Sbjct: 456 CGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGV 515

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           LS C+N G L  GRA               F + L D                   E  +
Sbjct: 516 LSACSNAGLLDKGRA--------------HFKSMLQDYGI----------------EPCI 545

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             +T M+    R G FD A++L   +     +P V    ++L AC     L++GK
Sbjct: 546 EHYTCMVWLLGRSGQFDEAVKLIGEI---PFQPSVMVWRALLGACVIHKNLDLGK 597



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 3/149 (2%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  I  + ++G+ EKA+ +  +     I     TY S+L+  A L +LE G+++HS+  
Sbjct: 376 WNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTI 435

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           ++ +   D V+ + L+ M+  CG + + R  F+K+D      WN L+  YS  G   E+L
Sbjct: 436 KT-MYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEAL 494

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            LF  MQ      +  TF  VL   +  G
Sbjct: 495 NLFDMMQQSNSKPNKLTFVGVLSACSNAG 523


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/629 (38%), Positives = 382/629 (60%), Gaps = 21/629 (3%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A+K+FD++ +R++V+W  MI+ +   G A   +++F +M   G+  D  T  +VLS C  
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC---GDLDGAIRVFEKMGERSVVSW 336
            G L  G+ +H+  ++   + ++    +L+DMY+KC   G +D + +VFE+M E +V+SW
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 337 TSMIAGYAREGVFDG-AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           T++I  YA+ G  D  AI LF  M+   I P+ ++ +S+L AC        G+ V+ Y  
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE 455
           +  + S   V N+L+ MYA+ G M DA   F+ +  K++VS+N ++   D +   L++ E
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIV---DGYAKNLKSEE 245

Query: 456 P--------------DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
                             T A +L   AS+ A+ +G +IHG +L+ G  +++ + NA++ 
Sbjct: 246 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS 305

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY +CG +  A  +F+ +  +++ISWT MI G+  HGF   A+  F+ M + G +P+E++
Sbjct: 306 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 365

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           +++VL ACSH G++ EG + FN M  E  I P++EHYACMVDLL R+G L EA  FI  M
Sbjct: 366 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 425

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P+  DA +W +LL  CR+H   +L    AE + E EPD+   Y+LL+N++A A +W++V 
Sbjct: 426 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 485

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           K+R+ +  R L K  GCSWIE++ +V+ F  G +SHP A +I   L +L  ++K  GY P
Sbjct: 486 KIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIP 545

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            T + L + +E +KE  L  HSEK+A+AFG+++    + IR+ KNLRVCGDCH   K++S
Sbjct: 546 DTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYIS 605

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               REIV+RDSNRFHH K+G CSC  +W
Sbjct: 606 MATGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 212/414 (51%), Gaps = 41/414 (9%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I RF ++G    A+++    E S    D  TY S+L  C +L  L  GK++HS +   G+
Sbjct: 28  ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 87

Query: 128 VIDDGVLGSKLVFMFVTC---GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF-KESL 183
            +D  V G  LV M+  C   G + + R+VF ++    V  W  ++  Y+++G   KE++
Sbjct: 88  ALDVCV-GCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAI 146

Query: 184 YLFKKMQSLGIAADSYTFSCVLKC------------------------LAVVGNSR---- 215
            LF KM S  I  + ++FS VLK                         +  VGNS     
Sbjct: 147 ELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMY 206

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
               R++DA K FD L ++++VS+N ++ GY  N  +E+   +F E+ + G  +   T  
Sbjct: 207 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 266

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++LSG A+ GA+  G  +H   LK  +       N L+ MYS+CG+++ A +VF +M +R
Sbjct: 267 SLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 326

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KDV 390
           +V+SWTSMI G+A+ G    A+ +F  M+  G +P+     ++L AC+  G++  G K  
Sbjct: 327 NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHF 386

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
           +   KE+ +   +     ++D+  + G + +A    N MP+  D + W T++GA
Sbjct: 387 NSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 440



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 213/435 (48%), Gaps = 49/435 (11%)

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           +VF+K+    +  W L++  +++ G  ++++ LF  M+  G   D +T+S VL     +G
Sbjct: 11  KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 70

Query: 213 --------NSR---------------------------RVKDAHKLFDELSDRDVVSWNC 237
                   +SR                            V D+ K+F+++ + +V+SW  
Sbjct: 71  LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 130

Query: 238 MISGYIANGVAEK-GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
           +I+ Y  +G  +K  +E+F +M++     +  +  +VL  C N      G  V+++A+K 
Sbjct: 131 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 190

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
             +      N+L+ MY++ G ++ A + F+ + E+++VS+ +++ GYA+    + A  LF
Sbjct: 191 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 250

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             +   GI    +   S+L   A  G +  G+ +H  + +   +S+  + NAL+ MY++C
Sbjct: 251 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 310

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACIL 465
           G++  A  VFN+M  ++++SW +MI           AL++F  ML+   +P+ +T   +L
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370

Query: 466 PACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKD 523
            AC+ +  +  G++    + + HGI         +VD+  + G+LV A    + +P   D
Sbjct: 371 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 430

Query: 524 LISWTIMIAGYGMHG 538
            + W  ++    +HG
Sbjct: 431 ALVWRTLLGACRVHG 445



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 17/166 (10%)

Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPAC 468
           A A  VF++MP +++V+W  MI           A+DLF+ M L  + PD  T + +L AC
Sbjct: 7   APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 66

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC---GVLVLARSLFDMIPAKDLI 525
             L  L  G+++H  ++R G++ D  V  ++VDMY KC   G +  +R +F+ +P  +++
Sbjct: 67  TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 126

Query: 526 SWTIMIAGYGMHGFGCD--AIATFNDMRQAGIEPDEVSFISVLYAC 569
           SWT +I  Y   G  CD  AI  F  M    I P+  SF SVL AC
Sbjct: 127 SWTAIITAYAQSG-ECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 171


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/656 (38%), Positives = 385/656 (58%), Gaps = 48/656 (7%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +F+ + + +++ WN M+ G+ ++      LE++  M++LG   +  +   +L  CA   A
Sbjct: 20  VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSK---------------------C------ 315
              GR +HA  LK     +   + +L+ MY++                     C      
Sbjct: 80  FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG 139

Query: 316 ----GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
               GD   A +VF+++ ER VVSW +MI GY   G ++ A+ LF+ M+R  + PD   +
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199

Query: 372 TSILHACACDGLLEIGKDVHDYIKE----NDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
            S++ ACA  G +E+G+ VH ++ +    +   SSL + NAL+D+Y+KCG +  A  +F 
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFE 259

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALER 476
            +  KD+VSWNT+IG          AL LF  ML++ E P+ VT+  +LPACA L A++ 
Sbjct: 260 GLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDI 319

Query: 477 GREIHGYILRH--GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           GR IH YI +   G++ + ++  +++DMY KCG +  A  +F+ +  + L SW  MI G+
Sbjct: 320 GRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGF 379

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
            MHG    A   F+ MR   +EPD+++F+ +L ACSHSGL+D G + F  M  + N+ PK
Sbjct: 380 AMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPK 439

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
           LEHY CM+DLL  +G   EA   I  MP+ PD  IW SLL  C+ H  ++LAE  A+ + 
Sbjct: 440 LEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLI 499

Query: 655 ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG 714
           ++EP+N+G YVLL+N+YA A +WE+V ++R  ++ +G+KK PGCS IE+   V+ F+ G 
Sbjct: 500 KIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGD 559

Query: 715 SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
             HP  ++I  +L+ + ++++  G+ P T   L   +E  KE AL  HSEKLA+AFG+++
Sbjct: 560 KLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 619

Query: 775 LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              G  + + KNLRVC +CHE  K +SK  +REIV RD  RFHHF+DG CSC  +W
Sbjct: 620 TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 235/463 (50%), Gaps = 58/463 (12%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ ++  +L+ CA  K+ E+G+++H+ + + G  +D  V  S L+ M+   G L++ R+V
Sbjct: 63  NSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTS-LISMYARNGGLEDARKV 121

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+   +  V     L+  Y+  G+F+                                  
Sbjct: 122 FDASSHRDVVSCTALITGYASRGDFR---------------------------------- 147

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                A K+FDE+++RDVVSWN MI+GY+ NG  E+ LE+FKEM+      D  T+V+V+
Sbjct: 148 ----SARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVV 203

Query: 275 SGCANCGALMFGRAVHAFALKAC----FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           S CA  G++  GR VH++         FS  +   N L+D+YSKCGD++ A  +FE +  
Sbjct: 204 SACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSC 263

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVSW ++I GY    ++  A+ LF+ M+R G  P+   + S+L ACA  G ++IG+ +
Sbjct: 264 KDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWI 323

Query: 391 HDYI--KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------- 441
           H YI  K   + +   +  +L+DMYAKCG +  A  VFN M  + + SWN MI       
Sbjct: 324 HVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHG 383

Query: 442 ---GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVA 496
               A DLF  M  N  EPD +T   +L AC+    L+ GR+I   + + + ++      
Sbjct: 384 RANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHY 443

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
             ++D+    G+   A  +   +P + D + W  ++     HG
Sbjct: 444 GCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHG 486



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 86/190 (45%), Gaps = 7/190 (3%)

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  A S+F+ I   +L+ W  M+ G+        A+  +  M   G  P+  SF  +L +
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73

Query: 569 CSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           C+ S   +EG +    +++  C ++  +  +  ++ + +R G L +A +  +      D 
Sbjct: 74  CAKSKAFEEGRQIHAQVLKLGCGLDRYV--HTSLISMYARNGGLEDARKVFD-ASSHRDV 130

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
               +L+ G     + + A KV + +   E D   +  ++   Y E  ++EE  +L +++
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEI--TERDVVSWNAMITG-YVENGRYEEALELFKEM 187

Query: 688 SRRGLKKNPG 697
            R  ++ + G
Sbjct: 188 MRTNVRPDEG 197


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 230/572 (40%), Positives = 362/572 (63%), Gaps = 14/572 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           T+L  C +   L  G+ +HA  L + F  ++   NTLL++Y+KCGDL  A ++F++M  R
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI--GKD 389
            VV+WT++I GY++      A+ L   M+R G++P+ + + S+L A +  G  ++  G+ 
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H         S++YVS A++DMYA+C  + +A+ +F+ M  K+ VSWN +I        
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199

Query: 443 ---ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              A  LF  ML +N +P   T + +L ACAS+ +LE+G+ +H  +++ G      V N 
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           ++DMY K G +  A+ +FD +  +D++SW  M+ GY  HG G  A+  F +M +  I P+
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
           +++F+ VL ACSH+GL+DEG  +F+MM+ + N+EP++ HY  MVDLL R G+L  A +FI
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFDMMK-KYNVEPQISHYVTMVDLLGRAGHLDRAIQFI 378

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
             MP+ P A +WG+LL  CR+H  ++L    AE +FEL+    G +VLL N+YA A +W 
Sbjct: 379 SEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWN 438

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           +  K+R+ +   G+KK P CSW+E++ +V++FVA   +HP  ++I ++ +++  ++K  G
Sbjct: 439 DAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIG 498

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
           Y P + + L+  D+ E+E  L  HSEKLA+AF +LN P G TIR+ KN+R+CGDCH   K
Sbjct: 499 YVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFK 558

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           F+SK   REI++RD+NRFHHF DG CSC  +W
Sbjct: 559 FVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 180/332 (54%), Gaps = 14/332 (4%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A KLFDE+S RDVV+W  +I+GY  +   +  L +  EML +G   +  T+ ++L   + 
Sbjct: 69  ARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASG 128

Query: 280 CGA--LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
            G+  ++ GR +H   L+  +   +  +  +LDMY++C  L+ A  +F+ M  ++ VSW 
Sbjct: 129 VGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWN 188

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           ++IAGYAR+G  D A  LF  M+RE ++P  +  +S+L ACA  G LE GK VH  + + 
Sbjct: 189 ALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKW 248

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
             +   +V N L+DMYAK GS+ DA+ VF+++  +D+VSWN+M+           AL  F
Sbjct: 249 GEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRF 308

Query: 448 VAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             ML+    P+ +T  C+L AC+    L+ GR     + ++ +    +    +VD+  + 
Sbjct: 309 EEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRA 368

Query: 507 GVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
           G L  A      +P K   + W  ++    MH
Sbjct: 369 GHLDRAIQFISEMPIKPTAAVWGALLGACRMH 400



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 211/420 (50%), Gaps = 43/420 (10%)

Query: 83  MEVLYSSEKSKIDTKTYC-SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM 141
           ME++    K+    +  C ++L+ C  L  L +GK +H+++  S    DD V+ + L+ +
Sbjct: 1   MELIRQQCKNNAGAREICHTLLKRCTHLNKLNEGKIIHALLLNSRFR-DDLVMQNTLLNL 59

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           +  CGDL   R++F+++ +  V  W  L+  YS+    +++L L  +M  +G+  + +T 
Sbjct: 60  YAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTL 119

Query: 202 SCVLKCLAVVGNS----------------------------------RRVKDAHKLFDEL 227
           + +LK  + VG++                                    +++A  +FD +
Sbjct: 120 ASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVM 179

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
             ++ VSWN +I+GY   G  +K   +F  ML         T  +VL  CA+ G+L  G+
Sbjct: 180 VSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGK 239

Query: 288 AVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
            VHA  +K    K ++F  NTLLDMY+K G ++ A +VF+++ +R VVSW SM+ GY++ 
Sbjct: 240 WVHALMIKWG-EKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQH 298

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G+   A++ F  M+R  I P+      +L AC+  GLL+ G+   D +K+ +++  +   
Sbjct: 299 GLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHY 358

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALDLFVAMLQNFEPDGVTMACIL 465
             ++D+  + G +  A    ++MP+K   + W  ++GA      M +N E  G    CI 
Sbjct: 359 VTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGA----CRMHKNMELGGYAAECIF 414



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 139/305 (45%), Gaps = 49/305 (16%)

Query: 93  KIDTKTYCSILQLCADLKSLE--DGKKVHSIICESGIVIDDGVLGS-KLVFMFVTCGDLK 149
           K +  T  S+L+  + + S +   G+++H +    G   D  V  S  ++ M+  C  L+
Sbjct: 113 KPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGY--DSNVYVSCAILDMYARCHHLE 170

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL---- 205
           E + +F+ + +     WN L+  Y++ G   ++  LF  M    +    +T+S VL    
Sbjct: 171 EAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACA 230

Query: 206 --------------------KCLAVVGN--------SRRVKDAHKLFDELSDRDVVSWNC 237
                               K +A VGN        S  ++DA K+FD L+ RDVVSWN 
Sbjct: 231 SMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNS 290

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M++GY  +G+ +  L+ F+EML      +  T + VL+ C++ G L  GR       K  
Sbjct: 291 MLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYN 350

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSM-----------IAGYAR 345
              +IS   T++D+  + G LD AI+   +M  +   + W ++           + GYA 
Sbjct: 351 VEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAA 410

Query: 346 EGVFD 350
           E +F+
Sbjct: 411 ECIFE 415


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 260/736 (35%), Positives = 413/736 (56%), Gaps = 64/736 (8%)

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           +++  ++F++++    F+WN+++  ++  G + E++  + +M   G+ AD++T+  V+K 
Sbjct: 80  MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139

Query: 208 LAVVGNSRRVK--------------------------------DAHKLFDELSDRDVVSW 235
           +A + +    K                                DA K+F+E+ +RD+VSW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N MISGY+A G     L +FKEML  GF  D  + ++ L  C++  +   G+ +H  A++
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259

Query: 296 ACF-SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           +   + ++    ++LDMYSK G++  A R+F  M +R++V+W  MI  YAR G    A  
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319

Query: 355 LFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
            F+ M  + G++PDV    ++L A A   +LE G+ +H Y         + +  AL+DMY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASA---ILE-GRTIHGYAMRRGFLPHMVLETALIDMY 375

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNFEPDGVTMA 462
            +CG +  AE +F++M  K+++SWN++I A          L+LF  +   +  PD  T+A
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            ILPA A   +L  GREIH YI++    ++  + N++V MY  CG L  AR  F+ I  K
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           D++SW  +I  Y +HGFG  ++  F++M  + + P++ +F S+L ACS SG+VDEGW +F
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
             M+ E  I+P +EHY CM+DL+ RTGN S A RF+E MP  P A IWGSLL   R H +
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKD 615

Query: 643 VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIE 702
           + +AE  AE +F++E DNTG YVLL N+YAEA +WE+V +++  +  +G+ +    S +E
Sbjct: 616 ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVE 675

Query: 703 IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF--------PKTRYALINADEME 754
            KGK ++F  G  SH    KI  +L  +   +  E  +        P+T   L+ +    
Sbjct: 676 AKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPET---LVKSRSNS 732

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
                  HS +LA  FG+++   G+ + V  N R+C  CHE  +  S+  RREIV+ DS 
Sbjct: 733 PR----RHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSK 788

Query: 815 RFHHFKDGRCSCRGFW 830
            FHHF +GRCSC  +W
Sbjct: 789 IFHHFSNGRCSCGNYW 804



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 60/582 (10%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           + L    +SR ++DA +LFDE++  D   WN MI G+ + G+  + ++ +  M+  G   
Sbjct: 69  RALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKA 128

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T   V+   A   +L  G+ +HA  +K  F  ++   N+L+ +Y K G    A +VF
Sbjct: 129 DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           E+M ER +VSW SMI+GY   G    ++ LF+ M++ G +PD ++  S L AC+     +
Sbjct: 189 EEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPK 248

Query: 386 IGKDVHDYIKENDMQS-SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
           +GK++H +   + +++  + V  +++DMY+K G ++ AE +FN M  ++IV+WN MIG  
Sbjct: 249 MGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCY 308

Query: 443 -----ALDLFVAML----QN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                  D F+       QN  +PD +T   +LPA A L     GR IHGY +R G    
Sbjct: 309 ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPH 364

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             +  A++DMY +CG L  A  +FD +  K++ISW  +IA Y  +G    A+  F ++  
Sbjct: 365 MVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWD 424

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM---RYECN--IEPKLEHYACMVDLLSR 607
           + + PD  +  S+L A + S  + EG      +   RY  N  I   L H   M      
Sbjct: 425 SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMC----- 479

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL-----AEKVAEHVFELEPDNTG 662
            G+L +A +    + +  D   W S++    +H   ++     +E +A  V    P+ + 
Sbjct: 480 -GDLEDARKCFNHI-LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV---NPNKST 534

Query: 663 YYVLLANVYAEA---EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           +  LLA         E WE  + ++ +       ++ GC  +++ G+   F A       
Sbjct: 535 FASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCM-LDLIGRTGNFSAA------ 587

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRY--ALINADEMEKEVAL 759
                   KR   EM    + P  R   +L+NA    K++ +
Sbjct: 588 --------KRFLEEMP---FVPTARIWGSLLNASRNHKDITI 618



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 184/382 (48%), Gaps = 31/382 (8%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  +  S L  C+ + S + GK++H     S I   D ++ + ++ M+   G++    
Sbjct: 228 KPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAE 287

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYTFSCVLKCLAVV 211
           R+FN +    +  WN+++  Y++ G   ++   F+KM +  G+  D  T   +L   A++
Sbjct: 288 RIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL 347

Query: 212 ----------------------------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                       G   ++K A  +FD +++++V+SWN +I+ Y+
Sbjct: 348 EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            NG     LE+F+E+ +     D  T+ ++L   A   +L  GR +HA+ +K+ +     
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI 467

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N+L+ MY+ CGDL+ A + F  +  + VVSW S+I  YA  G    ++ LF  M+   
Sbjct: 468 ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASR 527

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADA 422
           + P+     S+L AC+  G+++ G +  + +K E  +   +     ++D+  + G+ + A
Sbjct: 528 VNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAA 587

Query: 423 ESVFNQMP-VKDIVSWNTMIGA 443
           +    +MP V     W +++ A
Sbjct: 588 KRFLEEMPFVPTARIWGSLLNA 609


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/629 (38%), Positives = 382/629 (60%), Gaps = 21/629 (3%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A+K+FD++ +R++V+W  MI+ +   G A   +++F +M   G+  D  T  +VLS C  
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC---GDLDGAIRVFEKMGERSVVSW 336
            G L  G+ +H+  ++   + ++    +L+DMY+KC   G +D + +VFE+M E +V+SW
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 337 TSMIAGYAREGVFDG-AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           T++I  YA+ G  D  AI LF  M+   I P+ ++ +S+L AC        G+ V+ Y  
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE 455
           +  + S   V N+L+ MYA+ G M DA   F+ +  K++VS+N ++   D +   L++ E
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIV---DGYAKNLKSEE 240

Query: 456 P--------------DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
                             T A +L   AS+ A+ +G +IHG +L+ G  +++ + NA++ 
Sbjct: 241 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS 300

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY +CG +  A  +F+ +  +++ISWT MI G+  HGF   A+  F+ M + G +P+E++
Sbjct: 301 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 360

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           +++VL ACSH G++ EG + FN M  E  I P++EHYACMVDLL R+G L EA  FI  M
Sbjct: 361 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 420

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P+  DA +W +LL  CR+H   +L    AE + E EPD+   Y+LL+N++A A +W++V 
Sbjct: 421 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 480

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           K+R+ +  R L K  GCSWIE++ +V+ F  G +SHP A +I   L +L  ++K  GY P
Sbjct: 481 KIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIP 540

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            T + L + +E +KE  L  HSEK+A+AFG+++    + IR+ KNLRVCGDCH   K++S
Sbjct: 541 DTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYIS 600

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               REIV+RDSNRFHH K+G CSC  +W
Sbjct: 601 MATGREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 212/414 (51%), Gaps = 41/414 (9%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I RF ++G    A+++    E S    D  TY S+L  C +L  L  GK++HS +   G+
Sbjct: 23  ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 82

Query: 128 VIDDGVLGSKLVFMFVTC---GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF-KESL 183
            +D  V G  LV M+  C   G + + R+VF ++    V  W  ++  Y+++G   KE++
Sbjct: 83  ALDVCV-GCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAI 141

Query: 184 YLFKKMQSLGIAADSYTFSCVLKC------------------------LAVVGNSR---- 215
            LF KM S  I  + ++FS VLK                         +  VGNS     
Sbjct: 142 ELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMY 201

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
               R++DA K FD L ++++VS+N ++ GY  N  +E+   +F E+ + G  +   T  
Sbjct: 202 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 261

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++LSG A+ GA+  G  +H   LK  +       N L+ MYS+CG+++ A +VF +M +R
Sbjct: 262 SLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 321

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KDV 390
           +V+SWTSMI G+A+ G    A+ +F  M+  G +P+     ++L AC+  G++  G K  
Sbjct: 322 NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHF 381

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
           +   KE+ +   +     ++D+  + G + +A    N MP+  D + W T++GA
Sbjct: 382 NSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 435



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 213/435 (48%), Gaps = 49/435 (11%)

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           +VF+K+    +  W L++  +++ G  ++++ LF  M+  G   D +T+S VL     +G
Sbjct: 6   KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 65

Query: 213 --------NSR---------------------------RVKDAHKLFDELSDRDVVSWNC 237
                   +SR                            V D+ K+F+++ + +V+SW  
Sbjct: 66  LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 125

Query: 238 MISGYIANGVAEK-GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
           +I+ Y  +G  +K  +E+F +M++     +  +  +VL  C N      G  V+++A+K 
Sbjct: 126 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 185

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
             +      N+L+ MY++ G ++ A + F+ + E+++VS+ +++ GYA+    + A  LF
Sbjct: 186 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 245

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             +   GI    +   S+L   A  G +  G+ +H  + +   +S+  + NAL+ MY++C
Sbjct: 246 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 305

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACIL 465
           G++  A  VFN+M  ++++SW +MI           AL++F  ML+   +P+ +T   +L
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365

Query: 466 PACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKD 523
            AC+ +  +  G++    + + HGI         +VD+  + G+LV A    + +P   D
Sbjct: 366 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 425

Query: 524 LISWTIMIAGYGMHG 538
            + W  ++    +HG
Sbjct: 426 ALVWRTLLGACRVHG 440



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 17/166 (10%)

Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPAC 468
           A A  VF++MP +++V+W  MI           A+DLF+ M L  + PD  T + +L AC
Sbjct: 2   APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 61

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC---GVLVLARSLFDMIPAKDLI 525
             L  L  G+++H  ++R G++ D  V  ++VDMY KC   G +  +R +F+ +P  +++
Sbjct: 62  TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 121

Query: 526 SWTIMIAGYGMHGFGCD--AIATFNDMRQAGIEPDEVSFISVLYAC 569
           SWT +I  Y   G  CD  AI  F  M    I P+  SF SVL AC
Sbjct: 122 SWTAIITAYAQSG-ECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 166


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 260/773 (33%), Positives = 417/773 (53%), Gaps = 44/773 (5%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S+L  C      E G+ VH+ + + G    + V+G+ L+ +++  G L    RVF+++  
Sbjct: 148 SVLSACTKAALFEQGRLVHAQVYKQG-SCSETVVGNALIALYLRFGSLSLAERVFSEMPY 206

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
                +N L+  +++ GN + +L +F++M+  G   D  T + +L   A +G+  + K  
Sbjct: 207 CDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQL 266

Query: 221 H--------------------------------KLFDELSDRDVVSWNCMISGYIANGVA 248
           H                                ++F      +VV WN M+  Y      
Sbjct: 267 HSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDL 326

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
            K  ++F +M+  G   +  T   +L  C   G +  G  +H  ++K  F  ++  +  L
Sbjct: 327 AKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVL 386

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           +DMYSK G LD A R+ E +  + VVSWTSMIAGY +      A+  F+ M   GI PD 
Sbjct: 387 IDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDN 446

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
             + S + ACA    +  G+ +H  +  +   + + + NAL+++YA+CG   +A S+F  
Sbjct: 447 IGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEA 506

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG 477
           +  KD ++WN M+           AL++F+ M Q   + +  T    + A A+LA +++G
Sbjct: 507 IEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQG 566

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           ++IH  +++ G +++  VANA++ +Y KCG +  A+  F  +  ++ +SW  +I     H
Sbjct: 567 KQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQH 626

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G+G +A+  F+ M+Q G++P++V+FI VL ACSH GLV+EG  +F  M  E  I P+ +H
Sbjct: 627 GWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDH 686

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           YAC+VD+L R G L  A +F+E MPV+ +A +W +LL  CR+H  +++ E  A+++ ELE
Sbjct: 687 YACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELE 746

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           P ++  YVLL+N YA   KW     +R+ +  RG++K PG SWIE+K  V+ F  G   H
Sbjct: 747 PHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLH 806

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
           P A +I   L  L   + + GY     +     ++ +K+     HSEKLA+AFG+++LP 
Sbjct: 807 PLAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPP 866

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              +RV KNLRVC DCH   KF S+   REIVLRD  RFHHF +G CSC  FW
Sbjct: 867 SMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 259/532 (48%), Gaps = 54/532 (10%)

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLE 113
           S+   C    +N  I R  + GN E A+E+      S    D  T  S+L  CA +  L 
Sbjct: 202 SEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLN 261

Query: 114 DGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
            GK++HS + ++G+  D  + GS L+ ++V CG + E   +F   D   V +WNL++  Y
Sbjct: 262 KGKQLHSYLLKAGMSPDYIIEGS-LLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAY 320

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------ 221
            +  +  +S  LF +M + G+  + +T+ C+L+     G     +  H            
Sbjct: 321 GQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDM 380

Query: 222 --------------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                               ++ + L  +DVVSW  MI+GY+ +   ++ LE FK+M   
Sbjct: 381 YVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLF 440

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G   D   + + +S CA   A+  G+ +H+    + +S ++S  N L+++Y++CG    A
Sbjct: 441 GIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEA 500

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +FE +  +  ++W  M++G+A+ G+++ A+ +F  M + G++ +V+   S + A A  
Sbjct: 501 FSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANL 560

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             ++ GK +H  + +    S   V+NAL+ +Y KCGS+ DA+  F +M  ++ VSWNT+I
Sbjct: 561 ADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTII 620

Query: 442 G----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYI----LR 486
                      ALDLF  M Q   +P+ VT   +L AC+ +  +E G    GY       
Sbjct: 621 TSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGL---GYFKSMSSE 677

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
           HGI    +    +VD+  + G L  AR   + +P + + + W  +++   +H
Sbjct: 678 HGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVH 729



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 142/453 (31%), Positives = 245/453 (54%), Gaps = 22/453 (4%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVF----KEMLNLGFNVDLATMVTVLSGCANCGA 282
           ++ R   S N  ++G++A+   EK L +F    ++   LG +VD A  +    G      
Sbjct: 1   MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLG-SVDFACALRECRGSVKHWP 59

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L+    +HA A+     ++    N L+D+Y+K G +  A RVFE++  R  VSW +M++G
Sbjct: 60  LV--PVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSG 117

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           YAR G+ + A+ L+  M   G+ P  Y ++S+L AC    L E G+ VH  + +    S 
Sbjct: 118 YARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSE 177

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-L 451
             V NAL+ +Y + GS++ AE VF++MP  D V++NT+I           AL++F  M L
Sbjct: 178 TVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRL 237

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
             + PD VT+A +L ACAS+  L +G+++H Y+L+ G+S D  +  +++D+YVKCGV+V 
Sbjct: 238 SGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVE 297

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A  +F      +++ W +M+  YG       +   F  M  AG+ P+E ++  +L  C++
Sbjct: 298 ALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTY 357

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           +G ++ G +  +++  +   E  +     ++D+ S+ G L +A R +E++  A D   W 
Sbjct: 358 AGEINLGEQ-IHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLE-AKDVVSWT 415

Query: 632 SLLCGCRIHHEVKLAEKVAE--HVFELEPDNTG 662
           S++ G   H   K A +  +   +F + PDN G
Sbjct: 416 SMIAGYVQHEFCKEALETFKDMQLFGIWPDNIG 448



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/431 (31%), Positives = 215/431 (49%), Gaps = 13/431 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V+ A ++F++LS RD VSW  M+SGY  NG+ E+ + ++ +M   G       + +VLS 
Sbjct: 93  VQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSA 152

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C        GR VHA   K     E    N L+ +Y + G L  A RVF +M     V++
Sbjct: 153 CTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTF 212

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++I+ +A+ G  + A+ +F  M   G  PD   I S+L ACA  G L  GK +H Y+ +
Sbjct: 213 NTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLK 272

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDL 446
             M     +  +L+D+Y KCG + +A  +F      ++V WN M+ A           DL
Sbjct: 273 AGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDL 332

Query: 447 FVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M+     P+  T  C+L  C     +  G +IH   ++ G  +D  V+  ++DMY K
Sbjct: 333 FCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSK 392

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
            G L  AR + +++ AKD++SWT MIAGY  H F  +A+ TF DM+  GI PD +   S 
Sbjct: 393 YGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASA 452

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           + AC+    + +G +  + + Y       +  +  +V+L +R G   EA+   E +    
Sbjct: 453 ISACAGIKAMRQGQQIHSRV-YVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIE-HK 510

Query: 626 DATIWGSLLCG 636
           D   W  ++ G
Sbjct: 511 DKITWNGMVSG 521


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 271/782 (34%), Positives = 426/782 (54%), Gaps = 49/782 (6%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D+ T   +L+ C  +     G+++H +  + G    +   G+ LV M++ CG + EG  
Sbjct: 97  VDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIE 156

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG- 212
           VF  +    V  W  L+   +      E + LF +M++ GI  + +TF+ VL  +A  G 
Sbjct: 157 VFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGA 216

Query: 213 -------NSRRVK------------------------DAHKLFDELSDRDVVSWNCMISG 241
                  +++ VK                        DA  +F+ +  RD+VSWN +++G
Sbjct: 217 LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG 276

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
              N    + L++F E       +  +T  TV+  CAN   L   R +H+  LK  F   
Sbjct: 277 LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLT 336

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFE-KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            +    L D YSKCG+L  A+ +F    G R+VVSWT++I+G  + G    A+ LF  M 
Sbjct: 337 GNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMR 396

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
            + + P+ +  +++L A     L  +   +H  + + + Q    V  AL+  Y+K GS  
Sbjct: 397 EDRVMPNEFTYSAMLKA----SLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTE 452

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACA 469
           DA S+F  +  KD+V+W+ M+          GA  LF  M +Q  +P+  T++ ++ ACA
Sbjct: 453 DALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACA 512

Query: 470 SLAA-LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
             +A +++GR+ H   +++       V++A+V MY + G +  A+ +F+    +DL+SW 
Sbjct: 513 CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWN 572

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI+GY  HG+   AI TF  M  +GI+ D V+F++V+  C+H+GLV EG ++F+ M  +
Sbjct: 573 SMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRD 632

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             I P +EHYACMVDL SR G L E    I  MP    A +W +LL  CR+H  V+L + 
Sbjct: 633 HKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKF 692

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            A+ +  LEP ++  YVLL+N+YA A KW+E  ++R+ +  R +KK  GCSWI+IK KV+
Sbjct: 693 SADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVH 752

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            F+A   SHP + +I   LK +   +K++GY P T + L +  E +KE  L  HSE+LA+
Sbjct: 753 SFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLAL 812

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           AFG++  P G  +++ KNLRVCGDCH + K +S    REI++RD +RFHHF  G CSC  
Sbjct: 813 AFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGD 872

Query: 829 FW 830
           FW
Sbjct: 873 FW 874



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 236/520 (45%), Gaps = 52/520 (10%)

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---------------CLAV- 210
           N ++ +Y++ G   E L  F   +  G+  DS T SCVLK               CL V 
Sbjct: 68  NRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127

Query: 211 VGNSR-----------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
            G+ R                  V +  ++F+ +  ++VV+W  +++G     +  + + 
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           +F  M   G   +  T  +VLS  A+ GAL  G+ VHA ++K      +   N+L++MY+
Sbjct: 188 LFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYA 247

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
           KCG ++ A  VF  M  R +VSW +++AG         A++LF        +       +
Sbjct: 248 KCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYAT 307

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VK 432
           ++  CA    L + + +H  + ++    +  V  AL D Y+KCG +ADA ++F+     +
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR 367

Query: 433 DIVSWNTMI------GALDLFVAMLQNFEPDGV-----TMACILPACASLAALERGREIH 481
           ++VSW  +I      G + L V +      D V     T + +L A  S+       +IH
Sbjct: 368 NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQIH 423

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
             +++       +V  A++  Y K G    A S+F MI  KD+++W+ M++ +   G   
Sbjct: 424 AQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCE 483

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACS-HSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
            A   FN M   GI+P+E +  SV+ AC+  S  VD+G R F+ +  +      +   + 
Sbjct: 484 GATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQG-RQFHAISIKYRYHDAICVSSA 542

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           +V + SR GN+  A    E      D   W S++ G   H
Sbjct: 543 LVSMYSRKGNIDSAQIVFERQ-TDRDLVSWNSMISGYAQH 581



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 194/397 (48%), Gaps = 35/397 (8%)

Query: 81  KAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           +A+++ + S  +  K+   TY ++++LCA+LK L   +++HS + + G  +   V+ + L
Sbjct: 285 EALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM-TAL 343

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGK-VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
              +  CG+L +   +F+     + V  W  ++    + G+   ++ LF +M+   +  +
Sbjct: 344 ADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403

Query: 198 SYTFSCVLKC----------------------------LAVVGNSRRVKDAHKLFDELSD 229
            +T+S +LK                             LA        +DA  +F  +  
Sbjct: 404 EFTYSAMLKASLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQ 463

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA-LMFGRA 288
           +DVV+W+ M+S +   G  E    +F +M   G   +  T+ +V+  CA   A +  GR 
Sbjct: 464 KDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQ 523

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
            HA ++K  +   I  ++ L+ MYS+ G++D A  VFE+  +R +VSW SMI+GYA+ G 
Sbjct: 524 FHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGY 583

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD-YIKENDMQSSLYVSN 407
              AI  FR M   GI+ D     +++  C  +GL+  G+   D  ++++ +  ++    
Sbjct: 584 SMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYA 643

Query: 408 ALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            ++D+Y++ G + +  S+   MP     + W T++GA
Sbjct: 644 CMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA 680



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 167/355 (47%), Gaps = 38/355 (10%)

Query: 317 DLDGAIRVFEKMGER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           D  GA    +++  R + V    ++  YAR G+    +  F    R G+  D   ++ +L
Sbjct: 47  DPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVL 106

Query: 376 HACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
            AC       +G+ +H   +K    +  +    +L+DMY KCGS+ +   VF  MP K++
Sbjct: 107 KACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNV 166

Query: 435 VSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGY 483
           V+W +++            + LF  M  +   P+  T A +L A AS  AL+ G+ +H  
Sbjct: 167 VTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQ 226

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
            ++ G  +   V N++++MY KCG++  A+S+F+ +  +D++SW  ++AG  ++    +A
Sbjct: 227 SVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEA 286

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACS-----------HSGLVDEGWRFF-NMMRYECNI 591
           +  F++ R    +  + ++ +V+  C+           HS ++  G+    N+M      
Sbjct: 287 LQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM------ 340

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
                    + D  S+ G L++A     M   + +   W +++ GC  + ++ LA
Sbjct: 341 -------TALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/687 (37%), Positives = 390/687 (56%), Gaps = 44/687 (6%)

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +M   G+   +Y  S +L+   +  +   +  A  +F+ + + +++ WN M  G+  +  
Sbjct: 55  QMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSD 114

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
               L+++  M++LG   +  T   +L  CA   A   G+ +H   LK  +  ++  + +
Sbjct: 115 PVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTS 174

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVS-------------------------------W 336
           L+ +Y + G L+ A +VF++   R VVS                               W
Sbjct: 175 LISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSW 234

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            +MI+GYA  G +  A+ LF+ M++  I PD   + +++ ACA  G +E+G+ VH +I +
Sbjct: 235 NAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDD 294

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           +   S+L + N+LMD+Y+KCG +  A  +F  +  KD++SWNT+IG          AL L
Sbjct: 295 HGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLL 354

Query: 447 FVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADR--NVANAIVDMY 503
           F  ML++ E P+ VTM  ILPACA L A++ GR IH YI +   SA    ++  +++DMY
Sbjct: 355 FQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMY 414

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +  A  +F+ I  K L SW  MI G+ MHG    A   F+ MR+ GIEPD+++F+
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFV 474

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L ACS SG++D G   F  M  +  I PKLEHY CM+DLL  +G   EA   I  M +
Sbjct: 475 GLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEM 534

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            PD  IW SLL  C+I   V+L E  A+++ ++EP+N G YVLL+N+YA A +W EV K+
Sbjct: 535 EPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKI 594

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R  ++ +G+KK PGCS IEI   V+ F+ G   HP  ++I  +L+ + + +++ G+ P T
Sbjct: 595 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDT 654

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              L   +E  KE AL  HSEKLA+AFG+++   G  + + KNLRVC +CHE  K +SK 
Sbjct: 655 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 714

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +REI+ RD  RFHHF+DG CSC  +W
Sbjct: 715 YKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 201/449 (44%), Gaps = 90/449 (20%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T+  +L+ CA  K+ ++G+++H  + + G  +D  V  S L+ ++V  G L++ R+V
Sbjct: 133 NSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTS-LISVYVQNGRLEDARKV 191

Query: 155 FNK-------------------------------IDNGKVFIWNLLMHEYSKTGNFKESL 183
           F++                               I    V  WN ++  Y++TGN+KE+L
Sbjct: 192 FDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK--------------------- 222
            LFK+M    I  D  T   V+   A  G+    +  H                      
Sbjct: 252 ELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLY 311

Query: 223 -----------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                      LF+ L  +DV+SWN +I GY    + ++ L +F+EML  G   +  TM+
Sbjct: 312 SKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTML 371

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFS--KEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           ++L  CA+ GA+  GR +H +  K   S     S   +L+DMY+KCGD++ A +VF  + 
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            +S+ SW +MI G+A  G  D A  +F  M + GIEPD      +L AC+  G+L++G+ 
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRH 491

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFV 448
           +   + ++  +   L     ++D+    G   +AE + N M                   
Sbjct: 492 IFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNM------------------- 532

Query: 449 AMLQNFEPDGVTMACILPACASLAALERG 477
                 EPDGV    +L AC     +E G
Sbjct: 533 ----EMEPDGVIWCSLLKACKIRGNVELG 557



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 162/390 (41%), Gaps = 73/390 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + E GN ++A+E+     K+ I  D  T  +++  CA   S+E G++VHS I
Sbjct: 233 SWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWI 292

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   +  ++ S L+ ++  CG+L+    +F  +    V  WN L+  Y+    +KE+
Sbjct: 293 DDHGFGSNLKIVNS-LMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEA 351

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----------SRRVKD------------ 219
           L LF++M   G   +  T   +L   A +G             +R+K             
Sbjct: 352 LLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLI 411

Query: 220 -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      AH++F+ +  + + SWN MI G+  +G A+   ++F  M  +G   D  
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDI 471

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V +LS C+  G L  GR  H F              T+   Y     L+         
Sbjct: 472 TFVGLLSACSRSGMLDLGR--HIF-------------RTMTQDYKITPKLE--------- 507

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                  +  MI      G+F  A  +   M    +EPD     S+L AC   G +E+G+
Sbjct: 508 ------HYGCMIDLLGHSGLFKEAEEMINNM---EMEPDGVIWCSLLKACKIRGNVELGE 558

Query: 389 D-VHDYIKENDMQSSLYVSNALMDMYAKCG 417
               + IK        YV   L ++YA  G
Sbjct: 559 SFAQNLIKIEPENPGCYV--LLSNIYATAG 586


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 271/760 (35%), Positives = 415/760 (54%), Gaps = 45/760 (5%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI-WNLLMHEY 173
           G ++H++   +G+   D  + + LV M+   G + E R VF++    +  + WN LM  Y
Sbjct: 119 GTQLHALAMATGLG-GDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAY 177

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-------------KCLAVVGNSRRVKD- 219
            K      ++ +F +M   G+  + + FSCV+             K  A+V  +   KD 
Sbjct: 178 VKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDV 237

Query: 220 ------------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                             A  +F ++ + DVVSWN  ISG + +G  +  LE+  +M + 
Sbjct: 238 FTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSS 297

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G   ++ T+ ++L  CA  GA   GR +H F +KA    +      L+DMY+K G LD A
Sbjct: 298 GLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDA 357

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            +VF+ + +R +V W ++I+G +       A+ LF  M +EG + +   + ++L + A  
Sbjct: 358 KKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASL 417

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             +   + VH   ++    S  +V N L+D Y KC  +  A  VF +    DI+++ +MI
Sbjct: 418 EAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMI 477

Query: 442 GALD----------LFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
            AL           LF+ ML +  +PD   ++ +L ACASL+A E+G+++H ++++    
Sbjct: 478 TALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM 537

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
           +D    NA+V  Y KCG +  A   F  +P K ++SW+ MI G   HG G  A+  F+ M
Sbjct: 538 SDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRM 597

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
               I P+ ++  SVL AC+H+GLVDE  R+FN M+    IE   EHYACM+DLL R G 
Sbjct: 598 VDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGK 657

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
           L +A   +  MP   +A +WG+LL   R+H + +L    AE +F LEP+ +G +VLLAN 
Sbjct: 658 LDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANT 717

Query: 671 YAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL 730
           YA A  W++V K+R+ +    +KK P  SW+E+K KV+ F+ G  SHP A+ I + L  L
Sbjct: 718 YASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDEL 777

Query: 731 RLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVC 790
              M + GY P     L + D+ EKE+ L  HSE+LA+AF +++ PAG  IRV KNLR+C
Sbjct: 778 GDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRIC 837

Query: 791 GDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            DCH   KF+S    REI++RD NRFHHF+DG CSCR +W
Sbjct: 838 RDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877



 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 158/523 (30%), Positives = 258/523 (49%), Gaps = 44/523 (8%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           +T   +L   A  +SL  G  +H+ + +SG+     V  + L+  +  C      RRVF+
Sbjct: 5   ETIGPLLTRYAATQSLLQGAHIHAHLLKSGLF---AVFRNHLLSFYSKCRLPGSARRVFD 61

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--------- 207
           +I +     W+ L+  YS     +++L  F+ M+S  +  + +    VLKC         
Sbjct: 62  EIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQ 121

Query: 208 --------------------LAVVGNSRRVKDAHKLFDELS-DRDVVSWNCMISGYIANG 246
                               +A+ G    V +A  +FDE   +R+ VSWN ++S Y+ N 
Sbjct: 122 LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKND 181

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
                ++VF EM+  G   +      V++ C     L  GR VHA  ++  + K++   N
Sbjct: 182 RCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTAN 241

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L+DMYSK GD+  A  VF K+ E  VVSW + I+G    G    A+ L   M   G+ P
Sbjct: 242 ALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           +V+ ++SIL ACA  G   +G+ +H ++ + +  S  Y++  L+DMYAK G + DA+ VF
Sbjct: 302 NVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVF 361

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALE 475
           + +P +D+V WN +I           AL LF  M  + F+ +  T+A +L + ASL A+ 
Sbjct: 362 DWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAIS 421

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
             R++H    + G  +D +V N ++D Y KC  L  A  +F+   + D+I++T MI    
Sbjct: 422 DTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALS 481

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
               G DAI  F +M + G++PD     S+L AC+     ++G
Sbjct: 482 QCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQG 524



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 235/484 (48%), Gaps = 46/484 (9%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           +  ++  C   + LE G+KVH+++  +G    D    + LV M+   GD++    VF K+
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVIRTGY-DKDVFTANALVDMYSKLGDIRMAAVVFGKV 263

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN---SR 215
               V  WN  +      G+ + +L L  +M+S G+  + +T S +LK  A  G     R
Sbjct: 264 PETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGR 323

Query: 216 RVK-----------------------------DAHKLFDELSDRDVVSWNCMISGYIANG 246
           ++                              DA K+FD +  RD+V WN +ISG     
Sbjct: 324 QIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGA 383

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
              + L +F  M   GF+V+  T+  VL   A+  A+   R VHA A K  F  +    N
Sbjct: 384 QHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVN 443

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L+D Y KC  L+ A RVFEK G   ++++TSMI   ++    + AI+LF  M+R+G++P
Sbjct: 444 GLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDP 503

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D + ++S+L+ACA     E GK VH ++ +    S ++  NAL+  YAKCGS+ DA+  F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAF 563

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALE 475
           + +P K +VSW+ MIG          ALD+F  M+ ++  P+ +TM  +L AC     ++
Sbjct: 564 SGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVD 623

Query: 476 RGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
             +     +    GI         ++D+  + G L  A  L + +P + +   W  ++A 
Sbjct: 624 EAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA 683

Query: 534 YGMH 537
             +H
Sbjct: 684 SRVH 687



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 160/611 (26%), Positives = 282/611 (46%), Gaps = 72/611 (11%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAA--DSYTFSCVLKCLAVVGNSRRVKDAHKLFDE 226
           L+  Y+ T +  +  ++   +   G+ A   ++  S   KC  + G++RRV      FDE
Sbjct: 10  LLTRYAATQSLLQGAHIHAHLLKSGLFAVFRNHLLSFYSKC-RLPGSARRV------FDE 62

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           + D   VSW+ +++ Y  N +    L  F+ M +     +   +  VL    + G   FG
Sbjct: 63  IPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FG 119

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAR 345
             +HA A+      +I   N L+ MY   G +D A  VF++ G ER+ VSW  +++ Y +
Sbjct: 120 TQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVK 179

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
                 A+++F  MV  G++P+ +  + +++AC     LE G+ VH  +        ++ 
Sbjct: 180 NDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFT 239

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-F 454
           +NAL+DMY+K G +  A  VF ++P  D+VSWN  I           AL+L + M  +  
Sbjct: 240 ANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGL 299

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            P+  T++ IL ACA   A   GR+IHG++++    +D  +A  +VDMY K G+L  A+ 
Sbjct: 300 VPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKK 359

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC----- 569
           +FD IP +DL+ W  +I+G        +A++ F  MR+ G + +  +  +VL +      
Sbjct: 360 VFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEA 419

Query: 570 -------------------SH--SGLVDEGWRFFNMMRYECNIEPKLEHY-----ACMVD 603
                              SH  +GL+D  W+  + + Y   +  K   Y       M+ 
Sbjct: 420 ISDTRQVHALAEKLGFLSDSHVVNGLIDSYWK-CDCLNYAYRVFEKHGSYDIIAFTSMIT 478

Query: 604 LLSRTGNLSEAYR-FIEMM--PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
            LS+  +  +A + F+EM+   + PD  +  SLL  C      +  ++V  H+ + +  +
Sbjct: 479 ALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS 538

Query: 661 TGYY-VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
             +    L   YA+    E+       ++  GL +    SW       +  + G + H H
Sbjct: 539 DVFAGNALVYTYAKCGSIEDA-----DLAFSGLPEKGVVSW-------SAMIGGLAQHGH 586

Query: 720 AKKIESLLKRL 730
            K+   +  R+
Sbjct: 587 GKRALDVFHRM 597



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 195/396 (49%), Gaps = 21/396 (5%)

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
           L T+  +L+  A   +L+ G  +HA  LK+       F N LL  YSKC     A RVF+
Sbjct: 4   LETIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFD 61

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
           ++ +   VSW+S++  Y+   +   A+  FR M    +  + + +  +L  CA D     
Sbjct: 62  EIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVL-KCAPDA--GF 118

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA-- 443
           G  +H       +   ++V+NAL+ MY   G + +A  VF++    ++ VSWN ++ A  
Sbjct: 119 GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYV 178

Query: 444 --------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                   + +F  M+    +P+    +C++ AC     LE GR++H  ++R G   D  
Sbjct: 179 KNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVF 238

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
            ANA+VDMY K G + +A  +F  +P  D++SW   I+G  +HG    A+     M+ +G
Sbjct: 239 TANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           + P+  +  S+L AC+ SG  + G +    M  + N +        +VD+ ++ G L +A
Sbjct: 299 LVPNVFTLSSILKACAGSGAFNLGRQIHGFM-VKANADSDNYIAFGLVDMYAKHGLLDDA 357

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
            +  + +P   D  +W +L+ GC   H  + AE ++
Sbjct: 358 KKVFDWIP-QRDLVLWNALISGCS--HGAQHAEALS 390



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 198/415 (47%), Gaps = 37/415 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I      G+ + A+E+L   + S +  +  T  SIL+ CA   +   G+++H  +
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFM 329

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++     D  +   LV M+   G L + ++VF+ I    + +WN L+   S      E+
Sbjct: 330 VKAN-ADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEA 388

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSRRV----------KDAH-------- 221
           L LF +M+  G   +  T + VLK    L  + ++R+V           D+H        
Sbjct: 389 LSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDS 448

Query: 222 -----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                      ++F++    D++++  MI+        E  +++F EML  G + D   +
Sbjct: 449 YWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVL 508

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++L+ CA+  A   G+ VHA  +K  F  ++   N L+  Y+KCG ++ A   F  + E
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPE 568

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVSW++MI G A+ G    A+ +F  MV E I P+   +TS+L AC   GL++  K  
Sbjct: 569 KGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRY 628

Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            + +KE   ++ +      ++D+  + G + DA  + N MP + +   W  ++ A
Sbjct: 629 FNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA 683


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 263/727 (36%), Positives = 402/727 (55%), Gaps = 56/727 (7%)

Query: 157 KIDNGK-VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD------SYTFSCVLKCLA 209
           +ID+ + + I+  ++  +    +  +S  ++K++ S  +A        S+    +LK   
Sbjct: 18  EIDHSRELIIFGFVLPPFFSITHSTQSSSIWKQLTSTKVAPSVPTNIPSHLGLRLLKAAL 77

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
            VG+ RR   A +LFD +   D  + + +IS +   G+  + + ++  +   G     + 
Sbjct: 78  NVGDFRR---AQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSV 134

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            +TV   C   G     + VH  A++     +    N L+  Y KC  ++GA RVF+ + 
Sbjct: 135 FLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLV 194

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            + VVSWTSM + Y   G+    + +F  M   G++P+   ++SIL AC+    L+ G+ 
Sbjct: 195 VKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRA 254

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA------ 443
           +H +   + M  +++V +AL+ +YA+C S+  A  VF+ MP +D+VSWN ++ A      
Sbjct: 255 IHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNRE 314

Query: 444 ----LDLFVAM----------------------------------LQN--FEPDGVTMAC 463
               L LF  M                                  +QN  F+P+ +T++ 
Sbjct: 315 YDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISS 374

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
            LPAC+ L +L  G+E+H Y+ RH +  D     A+V MY KCG L L+R++FDMI  KD
Sbjct: 375 FLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKD 434

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           +++W  MI    MHG G + +  F  M Q+GI+P+ V+F  VL  CSHS LV+EG + FN
Sbjct: 435 VVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFN 494

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
            M  +  +EP   HYACMVD+ SR G L EAY FI+ MP+ P A+ WG+LL  CR++  V
Sbjct: 495 SMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNV 554

Query: 644 KLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
           +LA+  A  +FE+EP+N G YV L N+   A+ W E  + R  +  RG+ K PGCSW+++
Sbjct: 555 ELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQV 614

Query: 704 KGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHS 763
             +V+ FV G  ++  + KI + L  L  +MK  GY P T Y L + D+ EK  +LC HS
Sbjct: 615 GDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHS 674

Query: 764 EKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGR 823
           EKLA+AFGILNL    +IRV KNLR+CGDCH   K++SK     I++RDS RFHHF++G 
Sbjct: 675 EKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGN 734

Query: 824 CSCRGFW 830
           CSC+  W
Sbjct: 735 CSCQDLW 741



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 175/361 (48%), Gaps = 45/361 (12%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K ++ T  SIL  C++LK L+ G+ +H      G+ I++  + S LV ++  C  +K+ R
Sbjct: 230 KPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGM-IENVFVCSALVSLYARCLSVKQAR 288

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            VF+ + +  V  WN ++  Y     + + L LF +M S G+ AD  T            
Sbjct: 289 LVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEAT------------ 336

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
                                 WN +I G + NG  EK +E+ ++M NLGF  +  T+ +
Sbjct: 337 ----------------------WNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISS 374

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
            L  C+   +L  G+ VH +  +     +++    L+ MY+KCGDL+ +  VF+ +  + 
Sbjct: 375 FLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKD 434

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV-- 390
           VV+W +MI   A  G     + LF  M++ GI+P+    T +L  C+   L+E G  +  
Sbjct: 435 VVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFN 494

Query: 391 ---HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALDL 446
               D++ E D  ++ Y    ++D++++ G + +A     +MP++   S W  ++GA  +
Sbjct: 495 SMGRDHLVEPD--ANHYA--CMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRV 550

Query: 447 F 447
           +
Sbjct: 551 Y 551



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 11/210 (5%)

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLE 113
           SK +      +NA IG   E G  EKA+E+L   +    K +  T  S L  C+ L+SL 
Sbjct: 327 SKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLR 386

Query: 114 DGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
            GK+VH  +    ++ D   + + LV+M+  CGDL   R VF+ I    V  WN ++   
Sbjct: 387 MGKEVHCYVFRHWLIGDLTTM-TALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIAN 445

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLF-----DELS 228
           +  GN +E L LF+ M   GI  +S TF+ VL   +   +SR V++  ++F     D L 
Sbjct: 446 AMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCS---HSRLVEEGLQIFNSMGRDHLV 502

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
           + D   + CM+  +   G   +  E  + M
Sbjct: 503 EPDANHYACMVDVFSRAGRLHEAYEFIQRM 532


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 289/819 (35%), Positives = 431/819 (52%), Gaps = 118/819 (14%)

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK---IDNGKVFIW 166
           K+L   K +H     +G +++     + L++ +++   +     +  K     +  V+ W
Sbjct: 35  KTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWW 94

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-------------------- 206
           N L+       +   +L LF++M++L    D YTF  V K                    
Sbjct: 95  NQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIR 154

Query: 207 ---------CLAVV---GNSRRVKDAHKLFDELSDR---DVVSWNCMISGYIANGVAEKG 251
                    C AV+   G  + V  A K+FDEL  R   D V+WN ++S Y    V    
Sbjct: 155 LGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVA 214

Query: 252 LEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
           + +F+EM +  G   D   +V +L  C   G  + GR VH F +++   +++   N L+D
Sbjct: 215 VSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVD 274

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE----- 365
           MY+KCG ++ A +VFE+M  + VV+W +M+ GY++ G F+ A+ LF  M  E IE     
Sbjct: 275 MYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVT 334

Query: 366 ------------------------------PDVYAITSILHACACDGLLEIGKDVHDYI- 394
                                         P+V  + S+L ACA  G L  GK+ H Y  
Sbjct: 335 WSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSV 394

Query: 395 ------KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD--IVSWNTMIG---- 442
                 + ND    L V NAL+DMYAKC S+  A ++F+++  KD  +V+W  MIG    
Sbjct: 395 KFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQ 454

Query: 443 ------ALDLFVAMLQ---NFEPDGVTMACILPACASLAALERGREIHGYILRHG-ISAD 492
                 AL LF  M +      P+  T++C+L ACA LAAL+ G++IH Y+LR   I +D
Sbjct: 455 HGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSD 514

Query: 493 -RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
              VAN ++DMY K G +  A+ +FD +  ++ +SWT ++ GYGMHG   DA   F++MR
Sbjct: 515 VLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMR 574

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
           +  +  D ++F+ VLYACSHSG+             +  ++P +EHYACMVDLL R G L
Sbjct: 575 KEALVLDGITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVDLLGRAGRL 621

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
            EA R I  MP+ P   +W +LL  CRIH   +LAE  A+ + EL+ DN G Y LL+N+Y
Sbjct: 622 GEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIY 681

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           A A +W++V ++   + R G+KK PG SW++ +  +  F  G  +H  ++KI   L  L 
Sbjct: 682 ANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADL- 740

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
             +KR     K  ++L + D+ EK   L  HSEKLA+A+ IL LP G  IR+TKNLR+CG
Sbjct: 741 --IKR----IKANFSLHDVDDEEKGDQLSEHSEKLALAYAILTLPPGAPIRITKNLRICG 794

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           D H    ++S     EI+LRDS+RFH FK+G CSC+G+W
Sbjct: 795 DFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 205/399 (51%), Gaps = 59/399 (14%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           DT    +IL +C  L     G++VH     SG+V +D  +G+ LV M+  CG +++  +V
Sbjct: 230 DTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLV-EDVFVGNALVDMYAKCGKMEDANKV 288

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F ++    V  WN ++  YS+ G F+++L LF KM+                        
Sbjct: 289 FERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMR------------------------ 324

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                     +E  + DVV+W+ +ISGY   G   + ++VF++M       ++ T++++L
Sbjct: 325 ----------EEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLL 374

Query: 275 SGCANCGALMFGRAVHAFALKACFSKE-------ISFNNTLLDMYSKCGDLDGAIRVFEK 327
           S CA+ GAL+ G+  H +++K     E       ++  N L+DMY+KC  L+ A  +F++
Sbjct: 375 SACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDE 434

Query: 328 M--GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR--EGIEPDVYAITSILHACACDGL 383
           +   +R VV+WT MI GYA+ G  + A++LF  M +    I P+ + I+ +L ACA    
Sbjct: 435 ICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAA 494

Query: 384 LEIGKDVHDYIKENDMQSS--LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
           L+ GK +H Y+       S  L+V+N L+DMY+K G +  A+ VF+ M  ++ VSW +++
Sbjct: 495 LKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLL 554

Query: 442 ----------GALDLFVAMLQN-FEPDGVTMACILPACA 469
                      A  +F  M +     DG+T   +L AC+
Sbjct: 555 TGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACS 593


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 286/823 (34%), Positives = 443/823 (53%), Gaps = 61/823 (7%)

Query: 67   NAEIGRFCEVGNLEKAMEVLYSSEKS------KIDTKTYCSILQLCADLKS--LEDGKKV 118
            N+ I  +C+ G+   A ++  + +K       K +  T+ S++     L +  L   +++
Sbjct: 247  NSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQL 306

Query: 119  HSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
             + + +SG  + D  +GS LV  F   G +   + +F K+    V   N L+    +   
Sbjct: 307  LTRVEKSGF-LHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKR 365

Query: 179  FKESLYLFKKMQ-SLGIAADSYTF---------------------------SCVLKCLAV 210
             +E++ LF +M+ S+ +  +SY                             S +L     
Sbjct: 366  GEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIA 425

Query: 211  VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
            +GN           + DA  +F  + ++D V+WN MI+G   N    + ++ F+EM    
Sbjct: 426  IGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTE 485

Query: 263  FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
                  TM++ LS CA+ G +  G  +H   LK     ++S +N LL +Y +CG +    
Sbjct: 486  LYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQ 545

Query: 323  RVFEKMGERSVVSWTSMIAGYA-REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            + F  M +   VSW S+I   A  E     A+  F  M+R G +P+     +IL A +  
Sbjct: 546  KAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSL 605

Query: 382  GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTM 440
             L E+GK +H  + + ++ +   + NAL+  Y KCG M   E++F++M   +D VSWN+M
Sbjct: 606  SLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSM 665

Query: 441  IG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGI 489
            I           A+D+   M+Q  +  DG T A +L ACA++A LERG E+HG  +R  +
Sbjct: 666  ISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACL 725

Query: 490  SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             +D  + +A+VDMY KCG +  A   F+M+PA++L SW  MI+GY  HG G  ++  F  
Sbjct: 726  ESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQ 785

Query: 550  MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
            M+  G  PD V+F+ VL ACSH+GLV+EG+  F+ M     + P++EH++CMVDLL R G
Sbjct: 786  MKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVG 845

Query: 610  NLSEAYRFIEMMPVAPDATIWGSLLCG-CRIH-HEVKLAEKVAEHVFELEPDNTGYYVLL 667
             L++   F+  MPV P+  IW ++L   CR +     L  + AE + E+EP N   Y+LL
Sbjct: 846  ELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILL 905

Query: 668  ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLL 727
            +N+YA   KW++V K R  + +  +KK  GCSW+ +K  V++FVAG  SHP    I   L
Sbjct: 906  SNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKL 965

Query: 728  KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNL 787
            K L  +M+  GY P+TR+AL + +   KE  L  HSEK+A+AF +L  P+   IR+ KNL
Sbjct: 966  KELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRILKNL 1024

Query: 788  RVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            RVCGDCH   K++S+   R+IVLRDSNRFHHF++G+CSC  FW
Sbjct: 1025 RVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 270/543 (49%), Gaps = 47/543 (8%)

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
           L LFK     G   D +  + ++   A VG+   +    K+FDE+  R++VSW+C+ISGY
Sbjct: 97  LQLFKN----GFVNDLFLCNTLINIYARVGD---LGSGRKVFDEMPLRNLVSWSCLISGY 149

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG--ALMFGRAVHAFALKACFSK 300
             N +  +  E+F++M++ GF  +     +V+  C  CG   L FG  +H    K  +  
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVN 209

Query: 301 EISFNNTLLDMYSKC-GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
           +++ +N L+ MY    G +D A R F+ +  R++VS  SMI+ Y + G    A  +F  M
Sbjct: 210 DVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM 269

Query: 360 VRE----GIEPDVYAITSILHAC---ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
            +E    G++P+ Y   S++ A    A  GL+ + + +   ++++     LYV +AL+  
Sbjct: 270 QKEVMGDGLKPNEYTFGSLISATCSLANSGLVLL-EQLLTRVEKSGFLHDLYVGSALVSG 328

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFEPDGVTMA 462
           +AK GS+  A+++F +M  +++VS N +I           A++LF+ M  + E +  +  
Sbjct: 329 FAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYM 388

Query: 463 CILPACASLAALERGR----EIHGYILRHG-ISADRNVANAIVDMYVKCGVLVLARSLFD 517
            IL A      LE G+    E+H +++R G ++A   + N +++MY KCG +  A  +F 
Sbjct: 389 IILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFR 448

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
           ++  KD ++W  MI G   +    +A+ TF +MR+  + P   + IS L +C+  G +  
Sbjct: 449 LMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISV 508

Query: 578 GWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           G +     ++   +++  + +   ++ L    G + E  +   +M +  D   W SL+ G
Sbjct: 509 GEQLHCEGLKLGLDLDVSVSN--ALLALYGECGYVKECQKAFSLM-LDYDHVSWNSLI-G 564

Query: 637 CRIHHEVKLAEKVAEHVFEL----EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
                E  + E V   +  +    +P+   +  +LA V + +     + +L ++I    L
Sbjct: 565 ALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLS-----LHELGKQIHALVL 619

Query: 693 KKN 695
           K+N
Sbjct: 620 KRN 622



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 158/592 (26%), Positives = 284/592 (47%), Gaps = 68/592 (11%)

Query: 113 EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHE 172
           +D +++H  + ++G V +D  L + L+ ++   GDL  GR+VF+++    +  W+ L+  
Sbjct: 90  KDAEELHLQLFKNGFV-NDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISG 148

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------------------------- 207
           Y++     E+  LF+KM S G   + Y F  V++                          
Sbjct: 149 YTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYV 208

Query: 208 ---------LAVVGNSRRVKD-AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF-- 255
                    +++ GN+  + D A + FD +  R++VS N MIS Y   G A    ++F  
Sbjct: 209 NDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFST 268

Query: 256 --KEMLNLGFNVDLATMVTVLSGC---ANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
             KE++  G   +  T  +++S     AN G ++  + +     K+ F  ++   + L+ 
Sbjct: 269 MQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVE-KSGFLHDLYVGSALVS 327

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDV 368
            ++K G +  A  +F+KM  R+VVS   +I G  R+   + A+ LF  M ++ +E  P+ 
Sbjct: 328 GFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNS 386

Query: 369 YAITSILHACACDGLLEIGK----DVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           Y I  IL A     +LE GK    +VH + I+   + + + + N L++MYAKCG++ DA 
Sbjct: 387 YMI--ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDAC 444

Query: 424 SVFNQMPVKDIVSWNTMIGALD---LFVAMLQNFE--------PDGVTMACILPACASLA 472
            VF  M  KD V+WN+MI  LD    F+  ++ F+        P   TM   L +CASL 
Sbjct: 445 VVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLG 504

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
            +  G ++H   L+ G+  D +V+NA++ +Y +CG +   +  F ++   D +SW  +I 
Sbjct: 505 WISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIG 564

Query: 533 GYG-MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
                     +A+ +F  M +AG +P+ V+FI++L A S   L + G +  + +  + N+
Sbjct: 565 ALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELG-KQIHALVLKRNV 623

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
                    ++    + G++         M    D   W S++ G  IH+E+
Sbjct: 624 AADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISG-YIHNEL 674



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 190/398 (47%), Gaps = 28/398 (7%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H    K  F  ++   NTL+++Y++ GDL    +VF++M  R++VSW+ +I+GY R  +
Sbjct: 95  LHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRM 154

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGL--LEIGKDVHDYIKENDMQSSLYVS 406
            + A  LFR MV +G  P+ YA  S++ AC   G   L+ G  +H  + +    + +  S
Sbjct: 155 PNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTAS 214

Query: 407 NALMDMYAKCGSMAD-AESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFE 455
           N L+ MY     M D A   F+ +  +++VS N+MI           A D+F  M +   
Sbjct: 215 NVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVM 274

Query: 456 PDGV-----TMACILPACASLA--ALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
            DG+     T   ++ A  SLA   L    ++   + + G   D  V +A+V  + K G 
Sbjct: 275 GDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGS 334

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +  A+++F  +  ++++S   +I G      G +A+  F +M+ + +E +  S++ +L A
Sbjct: 335 IGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDS-VELNPNSYMIILTA 393

Query: 569 CSHSGLVDEGWR----FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
                +++ G R        +     +  ++     ++++ ++ G +++A     +M   
Sbjct: 394 FPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMD-N 452

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHV--FELEPDN 660
            D+  W S++ G   + +   A K  + +   EL P N
Sbjct: 453 KDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSN 490



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 24/293 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  +     L KAM++++    +  ++D  T+ ++L  CA + +LE G +VH   
Sbjct: 661 SWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHG-- 718

Query: 123 CESGIVID-DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           C     ++ D V+GS LV M+  CG +    R F  +    ++ WN ++  Y++ G+  +
Sbjct: 719 CSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTK 778

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-----RDVVSWN 236
           SL LF +M+  G   D  TF  VL   +  G    V +    FD +S+       +  ++
Sbjct: 779 SLDLFAQMKLQGPLPDHVTFVGVLSACSHAG---LVNEGFSHFDSMSEIYGLAPRMEHFS 835

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC--ANCGALMFGRAVHAFAL 294
           CM+      G   K +E F   + +  NV +    TVL  C  AN      GR      L
Sbjct: 836 CMVDLLGRVGELNK-MEDFLNQMPVKPNVLIWR--TVLGACCRANGRNTALGRRAAEMLL 892

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV-----VSWTSMIAG 342
           +   +  +++   L +MY+  G  D   +    M +  V      SW +M  G
Sbjct: 893 EMEPTNAVNY-ILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDG 944


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 223/569 (39%), Positives = 359/569 (63%), Gaps = 12/569 (2%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L+ C     L  GRA+HA    + F  ++   N +L+MY+KCG L+ A  +F+KM  + 
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           +VSWT +I+GY++ G    A+ LF  M+  G +P+ + ++S+L A         G+ +H 
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA--------- 443
           +  +     +++V ++L+DMYA+   M +A+ +FN +  K++VSWN +I           
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290

Query: 444 -LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
            + LF+ ML Q FEP   T + +  ACAS  +LE+G+ +H ++++ G      + N ++D
Sbjct: 291 VMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 350

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY K G +  A+ +F  +  +D++SW  +I+GY  HG G +A+  F  M +A ++P+E++
Sbjct: 351 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 410

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           F+SVL ACSHSGL+DEG  +F +M+ +  IE ++ H+  +VDLL R G L+EA +FIE M
Sbjct: 411 FLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEM 469

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P+ P A +WG+LL  CR+H  + L    AE +FEL+P ++G +VLL+N+YA A +  +  
Sbjct: 470 PIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAA 529

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           K+R+ +   G+KK P CSW+EI+ +V++FVA   SHP  ++I+ + +++  ++K  GY P
Sbjct: 530 KVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVP 589

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            T + L   ++ ++E+ L  HSEKLA+AF +L  P G TIR+ KN+R+CGDCH   KF S
Sbjct: 590 DTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFAS 649

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +   REI++RD+NRFHHF  G CSCR +W
Sbjct: 650 RVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 216/411 (52%), Gaps = 26/411 (6%)

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS 198
           V   + CG L+  R +++K+ N   ++  L           K+   +   +QS     D 
Sbjct: 92  VLDLINCGSLEPERTLYSKMLNKCTYLRKL-----------KQGRAIHAHIQSSTFEDDL 140

Query: 199 YTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
              + +L   A  G+   +++A  LFD++  +D+VSW  +ISGY  +G A + L +F +M
Sbjct: 141 VLLNFILNMYAKCGS---LEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKM 197

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
           L+LGF  +  T+ ++L       +   GR +HAF+LK  +   +   ++LLDMY++   +
Sbjct: 198 LHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHM 257

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
             A  +F  +  ++VVSW ++IAG+AR+G  +  +RLF  M+R+G EP  +  +S+  AC
Sbjct: 258 REAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTAC 317

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
           A  G LE GK VH ++ ++  Q   Y+ N L+DMYAK GS+ DA+ VF ++  +DIVSWN
Sbjct: 318 ASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWN 377

Query: 439 TMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH 487
           ++I           AL LF  ML+   +P+ +T   +L AC+    L+ G+     + +H
Sbjct: 378 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH 437

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
            I A       +VD+  + G L  A    + +P K   + W  ++    MH
Sbjct: 438 KIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMH 488



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 210/399 (52%), Gaps = 41/399 (10%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y  +L  C  L+ L+ G+ +H+ I +S    DD VL + ++ M+  CG L+E + +F+K+
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHI-QSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKM 166

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV-------- 210
               +  W +L+  YS++G   E+L LF KM  LG   + +T S +LK            
Sbjct: 167 PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGR 226

Query: 211 ----------------VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                           VG+S          +++A  +F+ L+ ++VVSWN +I+G+   G
Sbjct: 227 QLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKG 286

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
             E  + +F +ML  GF     T  +V + CA+ G+L  G+ VHA  +K+         N
Sbjct: 287 EGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGN 346

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           TL+DMY+K G +  A +VF ++ ++ +VSW S+I+GYA+ G+   A++LF  M++  ++P
Sbjct: 347 TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQP 406

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           +     S+L AC+  GLL+ G+   + +K++ +++ +     ++D+  + G + +A    
Sbjct: 407 NEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFI 466

Query: 427 NQMPVKDIVS-WNTMIGA------LDLFV-AMLQNFEPD 457
            +MP+K   + W  ++G+      +DL V A  Q FE D
Sbjct: 467 EEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELD 505



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 168/390 (43%), Gaps = 75/390 (19%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  S+L+      S   G+++H+   + G  ++  V GS L+ M+     ++E + +FN 
Sbjct: 208 TLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHV-GSSLLDMYARWAHMREAKVIFNS 266

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------------ 205
           +    V  WN L+  +++ G  +  + LF +M   G     +T+S V             
Sbjct: 267 LAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQG 326

Query: 206 ------------KCLAVVGN--------SRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                       + +A +GN        S  +KDA K+F  L  +D+VSWN +ISGY  +
Sbjct: 327 KWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQH 386

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
           G+  + L++F++ML      +  T ++VL+ C++ G L  G+       K     +++ +
Sbjct: 387 GLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHH 446

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            T++D+  + G L+ A +  E+M  +   + W +++          G+ R+ + M     
Sbjct: 447 VTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL----------GSCRMHKNM----- 491

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           +  VYA   I              D HD        S  +V   L ++YA  G ++DA  
Sbjct: 492 DLGVYAAEQIFEL-----------DPHD--------SGPHV--LLSNIYASAGRLSDAAK 530

Query: 425 VFNQMPVKDI-----VSWNTMIGALDLFVA 449
           V   M    +      SW  +   + +FVA
Sbjct: 531 VRKMMKESGVKKEPACSWVEIENEVHVFVA 560



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I      G  E  M +     +   +    TY S+   CA   SLE GK VH+ +
Sbjct: 274 SWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHV 333

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +SG       +G+ L+ M+   G +K+ ++VF ++    +  WN ++  Y++ G   E+
Sbjct: 334 IKSG-GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEA 392

Query: 183 LYLFKKMQSLGIAADSYTFSCVL 205
           L LF++M    +  +  TF  VL
Sbjct: 393 LQLFEQMLKAKVQPNEITFLSVL 415


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 274/783 (34%), Positives = 420/783 (53%), Gaps = 53/783 (6%)

Query: 100 CSILQLCADLKSLED---GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           C+   L   LK   D   G +VH++   + +V  D  + + LV ++   G + E RR+F+
Sbjct: 101 CNEFALPVVLKCAPDVRFGAQVHALAVATRLV-HDVFVANALVAVYGGFGMVDEARRMFD 159

Query: 157 KI----DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL---- 208
           +            WN ++  Y K     +++ +F++M   G   + + FSCV+       
Sbjct: 160 EYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSR 219

Query: 209 ----------AVV--GNSRRVKDAHKL----------------FDELSDRDVVSWNCMIS 240
                     AVV  G  + V  A+ L                F+++   DVVSWN  IS
Sbjct: 220 DLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFIS 279

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G + +G   + LE+  +M + G   ++ T+ +VL  CA  GA   GR +H F +KA    
Sbjct: 280 GCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADF 339

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           +      L+DMY+K G LD A +VF+ M  R ++ W ++I+G + +G     + LF  M 
Sbjct: 340 DEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMR 399

Query: 361 REGIEPDVYAIT--SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           +EG++ DV   T  S+L + A    +   + VH   ++  + S  +V N L+D Y KCG 
Sbjct: 400 KEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQ 459

Query: 419 MADAESVFNQMPVKDIVSWNTMIGALD----------LFVAML-QNFEPDGVTMACILPA 467
           +  A  VF +    DI+S  TM+ AL           LFV ML +  EPD   ++ +L A
Sbjct: 460 LDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNA 519

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C SL+A E+G+++H ++++   ++D    NA+V  Y KCG +  A   F  +P + ++SW
Sbjct: 520 CTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSW 579

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
           + MI G   HG G  A+  F+ M   G+ P+ ++  SVL AC+H+GLVD+  ++F  M+ 
Sbjct: 580 SAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKE 639

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
              I+   EHYACM+D+L R G L +A   +  MP   +A +WG+LL   R+H + +L  
Sbjct: 640 TFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGR 699

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
             AE +F LEP+ +G +VLLAN YA A  W+E+ K+R+ +    +KK P  SW+EIK KV
Sbjct: 700 MAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKV 759

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
           + F+ G  SHP  + I   L  L   M + GY P     L + D  EKE+ L  HSE+LA
Sbjct: 760 HTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLA 819

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
           +AF +++ P+G  IRV KNLR+C DCH   K++SK   REI++RD NRFHHF +G CSC 
Sbjct: 820 VAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCG 879

Query: 828 GFW 830
            +W
Sbjct: 880 DYW 882



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 158/528 (29%), Positives = 254/528 (48%), Gaps = 49/528 (9%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           +T  S L      +SL  G  +HS + +SG++       + L+ ++  C      R VF+
Sbjct: 5   ETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAG---FSNHLLTLYSRCRLPSAARAVFD 61

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--------- 207
           +I +     W+ L+  YS  G  +++L  F+ M+  G+  + +    VLKC         
Sbjct: 62  EIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRFGAQ 121

Query: 208 --------------------LAVVGNSRRVKDAHKLFDEL----SDRDVVSWNCMISGYI 243
                               +AV G    V +A ++FDE      +R+ VSWN MIS Y+
Sbjct: 122 VHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYV 181

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            N  +   + VF+EM+  G   +      V++ C     L  GR VH   ++  + K++ 
Sbjct: 182 KNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVF 241

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N L+DMYSK GD++ A  VFEKM    VVSW + I+G    G    A+ L   M   G
Sbjct: 242 TANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSG 301

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           + P+V+ ++S+L ACA  G   +G+ +H ++ +       +V+  L+DMYAK G + DA 
Sbjct: 302 LVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDAR 361

Query: 424 SVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQ---NFEPDGVTMACILPACAS 470
            VF+ MP +D++ WN +I            L LF  M +   + + +  T+A +L + AS
Sbjct: 362 KVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTAS 421

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
             A+   R++H    + G+ +D +V N ++D Y KCG L  A  +F    + D+IS T M
Sbjct: 422 SEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTM 481

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +        G DAI  F  M + G+EPD     S+L AC+     ++G
Sbjct: 482 MTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 214/430 (49%), Gaps = 48/430 (11%)

Query: 84  EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFV 143
           E+++S E+   +   +  ++  C   + LE G++VH  +  +G    D    + LV M+ 
Sbjct: 195 EMVWSGERP--NEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYE-KDVFTANALVDMYS 251

Query: 144 TCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
             GD++    VF K+    V  WN  +      G+   +L L  +M+S G+  + +T S 
Sbjct: 252 KLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSS 311

Query: 204 VLKCLAVVGN---SRRVK-----------------------------DAHKLFDELSDRD 231
           VLK  A  G     R++                              DA K+FD +  RD
Sbjct: 312 VLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRD 371

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL--ATMVTVLSGCANCGALMFGRAV 289
           ++ WN +ISG   +G   + L +F  M   G ++D+   T+ +VL   A+  A+   R V
Sbjct: 372 LILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQV 431

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           HA A K     +    N L+D Y KCG LD AI+VF++     ++S T+M+   ++    
Sbjct: 432 HALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHG 491

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
           + AI+LF  M+R+G+EPD + ++S+L+AC      E GK VH ++ +    S ++  NAL
Sbjct: 492 EDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNAL 551

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDG 458
           +  YAKCGS+ DA+  F+ +P + IVSW+ MIG          ALDLF  ML +   P+ 
Sbjct: 552 VYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNH 611

Query: 459 VTMACILPAC 468
           +T+  +L AC
Sbjct: 612 ITLTSVLSAC 621



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 195/386 (50%), Gaps = 26/386 (6%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+ + L+      +L  G  +H+  LK+       F+N LL +YS+C     A  VF+++
Sbjct: 6   TIGSALARFGTSRSLFAGAHLHSHLLKSGLLA--GFSNHLLTLYSRCRLPSAARAVFDEI 63

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            +   VSW+S++  Y+  G+   A+  FR M   G+  + +A+  +L  CA D  +  G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVL-KCAPD--VRFGA 120

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM----PVKDIVSWNTMIGA- 443
            VH       +   ++V+NAL+ +Y   G + +A  +F++       ++ VSWNTMI A 
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180

Query: 444 ---------LDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                    + +F  M+ + E P+    +C++ AC     LE GR++HG ++R G   D 
Sbjct: 181 VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDV 240

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
             ANA+VDMY K G + +A ++F+ +PA D++SW   I+G   HG    A+     M+ +
Sbjct: 241 FTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSS 300

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC--MVDLLSRTGNL 611
           G+ P+  +  SVL AC+ +G  + G +    M          + +    +VD+ ++ G L
Sbjct: 301 GLVPNVFTLSSVLKACAGAGAFNLGRQIHGFM---VKAVADFDEFVAVGLVDMYAKHGFL 357

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGC 637
            +A +  + MP   D  +W +L+ GC
Sbjct: 358 DDARKVFDFMP-RRDLILWNALISGC 382


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 262/745 (35%), Positives = 407/745 (54%), Gaps = 84/745 (11%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           VF+ N L++ Y KTG+  ++  LF +M        +++++ +L   A  GN   +  A +
Sbjct: 48  VFLTNNLLNLYVKTGSSSDAHRLFDEMP----LKTTFSWNTILSAHAKAGN---LDSARR 100

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +FDE+   D VSW  MI GY   G+ +  +  F  M++ G +    T   VL+ CA   A
Sbjct: 101 VFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQA 160

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD------------------------- 317
           L  G+ VH+F +K   S  +   N+LL+MY+KCGD                         
Sbjct: 161 LDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISM 220

Query: 318 ------LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYA 370
                  D A+ +F++M +  +VSW S+I GY  +G    A+  F  M++   ++PD + 
Sbjct: 221 HMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFT 280

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG------------- 417
           + S+L ACA    L++GK +H +I   D+  +  V NAL+ MYAK G             
Sbjct: 281 LGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITG 340

Query: 418 ----------SMAD----------AESVFNQMPVKDIVSWNTMI----------GALDLF 447
                     S+ D          A ++F+ +  +D+V+W  MI           AL LF
Sbjct: 341 TPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLF 400

Query: 448 VAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M+ +  +P+  T+A +L   +SLA+L+ G+++H   +R    +  +V NA++ MY + 
Sbjct: 401 RLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRS 460

Query: 507 GVLVLARSLFDMIPA-KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           G +  AR +F+ I + +D ++WT MI     HG G +AI  F  M +  ++PD ++++ V
Sbjct: 461 GSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGV 520

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L AC+H GLV++G  +FN+M+   NIEP   HYACM+DLL R G L EAY FI  MP+ P
Sbjct: 521 LSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEP 580

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
           D   WGSLL  CR+H  V LA+  AE +  ++P+N+G Y+ LAN  +   KWE+  K+R+
Sbjct: 581 DVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRK 640

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +  + +KK  G SW++IK KV+IF    + HP    I  ++ ++  E+K+ G+ P T  
Sbjct: 641 SMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNS 700

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L + ++  KE  L  HSEKLA+AF ++N P   T+R+ KNLRVC DCH   +++S    
Sbjct: 701 VLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVE 760

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REI++RD+ RFHHFKDG CSC+ +W
Sbjct: 761 REIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 236/494 (47%), Gaps = 95/494 (19%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIIC---ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           T+ ++L  CA  ++L+ GKKVHS +    +SG+V     + + L+ M+  CGD    + V
Sbjct: 147 TFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVV----PVANSLLNMYAKCGDSVMAKVV 202

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+++       WN ++  + +   F  +L                               
Sbjct: 203 FDRMRLKDTSTWNTMISMHMQFCQFDLAL------------------------------- 231

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTV 273
                   LFD+++D D+VSWN +I+GY   G   + LE F  ML +     D  T+ +V
Sbjct: 232 -------ALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSV 284

Query: 274 LSGCANCGALMFGRAVHAF--------------ALKACFSKE------------------ 301
           LS CAN  +L  G+ +HA               AL + ++K                   
Sbjct: 285 LSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSL 344

Query: 302 --ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
             I+F  +LLD Y K GD+D A  +F+ +  R VV+WT+MI GYA+ G+   A+ LFR M
Sbjct: 345 NVIAFT-SLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLM 403

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           +REG +P+ Y + ++L   +    L+ GK +H      +  SS+ V NAL+ MY++ GS+
Sbjct: 404 IREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSI 463

Query: 420 ADAESVFNQM-PVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPA 467
            DA  +FN +   +D ++W +MI           A++LF  ML+ N +PD +T   +L A
Sbjct: 464 KDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSA 523

Query: 468 CASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLI 525
           C  +  +E+G+     +   H I    +    ++D+  + G+L  A +    +P + D++
Sbjct: 524 CTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVV 583

Query: 526 SWTIMIAGYGMHGF 539
           +W  +++   +H +
Sbjct: 584 AWGSLLSSCRVHKY 597



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 141/534 (26%), Positives = 238/534 (44%), Gaps = 114/534 (21%)

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
           H L   +  RD     C+ +  I +G+   G+ +   +LNL           V +G ++ 
Sbjct: 17  HLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNL----------YVKTGSSSD 66

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
              +F        LK  FS      NT+L  ++K G+LD A RVF+++ +   VSWT+MI
Sbjct: 67  AHRLFDE----MPLKTTFSW-----NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMI 117

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
            GY   G+F  A+  F  MV  GI P  +  T++L +CA    L++GK VH ++ +    
Sbjct: 118 VGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQS 177

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------------------ 442
             + V+N+L++MYAKCG    A+ VF++M +KD  +WNTMI                   
Sbjct: 178 GVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQM 237

Query: 443 -----------------------ALDLFVAMLQ--NFEPDGVTMACILPACASLAALERG 477
                                  AL+ F  ML+  + +PD  T+  +L ACA+  +L+ G
Sbjct: 238 TDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLG 297

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVL-------------------------- 511
           ++IH +I+R  +     V NA++ MY K G + +                          
Sbjct: 298 KQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYF 357

Query: 512 -------ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
                  AR++FD +  +D+++WT MI GY  +G   DA+  F  M + G +P+  +  +
Sbjct: 358 KIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAA 417

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA------CMVDLLSRTGNLSEAYRFI 618
           VL   S    +D G +          +  +LE  +       ++ + SR+G++ +A +  
Sbjct: 418 VLSVISSLASLDHGKQLH-------AVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIF 470

Query: 619 EMMPVAPDATIWGSLLCGCRIH----HEVKLAEKVAEHVFELEPDNTGYYVLLA 668
             +    D   W S++     H      ++L EK+      L+PD+  Y  +L+
Sbjct: 471 NHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLR--INLKPDHITYVGVLS 522



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 179/442 (40%), Gaps = 110/442 (24%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N+ I  +C  G   +A+E    +  S   K D  T  S+L  CA+ +SL+ GK++H+ 
Sbjct: 244 SWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAH 303

Query: 122 ICESGIVIDDGVLGSKLVFMFVTC---------------------------------GDL 148
           I  + + I  G +G+ L+ M+                                    GD+
Sbjct: 304 IVRADVDI-AGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDI 362

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
              R +F+ + +  V  W  ++  Y++ G   ++L LF+ M   G   ++YT + VL  +
Sbjct: 363 DPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVI 422

Query: 209 A------------------------VVGN--------SRRVKDAHKLFDEL-SDRDVVSW 235
           +                         VGN        S  +KDA K+F+ + S RD ++W
Sbjct: 423 SSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTW 482

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
             MI     +G+  + +E+F++ML +    D  T V VLS C + G +  G+        
Sbjct: 483 TSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGK-------- 534

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
                  S+ N + ++++                E +   +  MI    R G+ + A   
Sbjct: 535 -------SYFNLMKNVHNI---------------EPTSSHYACMIDLLGRAGLLEEAYNF 572

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD---YIKENDMQSSLYVSNALMDM 412
            R M    IEPDV A  S+L +C     +++ K   +    I  N+  + L ++N L   
Sbjct: 573 IRNM---PIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTL--- 626

Query: 413 YAKCGSMADAESVFNQMPVKDI 434
            + CG   DA  V   M  K +
Sbjct: 627 -SACGKWEDAAKVRKSMKDKAV 647


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/753 (35%), Positives = 418/753 (55%), Gaps = 62/753 (8%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           ++   L+ C   + L  GK +H++  +S  V     L +  + ++  C  L   RRVF+ 
Sbjct: 10  SFRQFLKTCIAHRDLRTGKSLHALYIKS-FVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
             +  VF +N L+  Y+K                     +SY                 V
Sbjct: 69  THDCNVFSFNTLISAYAK---------------------ESY-----------------V 90

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           + AH+LFDE+   D VS+N +I+ Y   G  +   ++F EM     ++D  T+  +++ C
Sbjct: 91  EVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITAC 150

Query: 278 A-NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE-RSVVS 335
             N G +   R +HA ++       +S  N L+  YSK G L  A R+F  + E R  VS
Sbjct: 151 GINVGLI---RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVS 207

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W SM+  Y +      A+ L+  M   G+  D++ + S+L A      L  G   H  + 
Sbjct: 208 WNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLI 267

Query: 396 ENDMQSSLYVSNALMDMYAKCGS-MADAESVFNQMPVKDIVSWNTMIGALDLFVAM---- 450
           ++    + +V + L+D+Y+KCG  M D   VF+++   D+V WNTMI    L+  +    
Sbjct: 268 KSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEA 327

Query: 451 LQNFE--------PDGVTMACILPACASLAALERGREIHGYILRHGISADR-NVANAIVD 501
           L+ F         PD  ++ C++ AC+++++  +GR++HG  L+  I ++R +V NA++ 
Sbjct: 328 LECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIA 387

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KCG L  A++LFD +P  + +S+  MIAGY  HG G  ++  F  M +    P  ++
Sbjct: 388 MYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNIT 447

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           FISVL AC+H+G V++G  +FNMM+ +  IEP+  H++CM+DLL R G LSEA R IE +
Sbjct: 448 FISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETI 507

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P  P    W +LL  CRIH  V+LA K A  + +L+P N   YV+LAN+Y++  + ++  
Sbjct: 508 PFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAA 567

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
            +R+ +  RG+KK PGCSWIE+  +++IFVA  + HP  KKI+  L+ +  ++K+ GY P
Sbjct: 568 SVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTP 627

Query: 742 KTRYALINAD----EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           + R A +  D    + E+E+ L  HSEKLA++FG+++   G+ I V KNLR+C DCH   
Sbjct: 628 EVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAI 687

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K++S+  +REI +RDS+RFH FKDG+CSC G+W
Sbjct: 688 KYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/406 (22%), Positives = 175/406 (43%), Gaps = 82/406 (20%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD-LKEGR 152
           +D  T  S+L    +++ L  G + H+ + +SG   +  V GS L+ ++  CG  + + R
Sbjct: 238 VDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHV-GSGLIDLYSKCGGCMLDCR 296

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFK-ESLYLFKKMQSLGIAADSYTFSCVLKC---- 207
           +VF++I N  + +WN ++  YS   +   E+L  F+++Q +G   D  +  CV+      
Sbjct: 297 KVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNM 356

Query: 208 -----------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
                                        +A+      ++DA  LFD + + + VS+N M
Sbjct: 357 SSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSM 416

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I+GY  +G+  + L +F+ ML + F     T ++VL+ CA+ G +  G+ ++   +K  F
Sbjct: 417 IAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKF 475

Query: 299 --SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
               E    + ++D+  + G L  A R+ E +                            
Sbjct: 476 GIEPEAGHFSCMIDLLGRAGKLSEAERLIETI---------------------------- 507

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAK 415
                   +P  +  +++L AC   G +E+  K  +  ++ + + ++ YV   L ++Y+ 
Sbjct: 508 ------PFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYV--MLANIYSD 559

Query: 416 CGSMADAESVFNQMPVKDI-----VSWNTMIGALDLFVAMLQNFEP 456
            G + DA SV   M  + +      SW  +   + +FVA    F P
Sbjct: 560 NGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAE-DTFHP 604



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 46/319 (14%)

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV-- 425
           +++    L  C     L  GK +H    ++ + +S Y+SN  + +Y+KC  ++ A  V  
Sbjct: 8   LHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD 67

Query: 426 -----------------------------FNQMPVKDIVSWNTMIG----------ALDL 446
                                        F++MP  D VS+NT+I           A  L
Sbjct: 68  HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQL 127

Query: 447 FVAMLQNF-EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F+ M + F + DG T++ I+ AC     L   R++H   +  G+ +  +V NA++  Y K
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACGINVGLI--RQLHALSVVTGLDSYVSVGNALITSYSK 185

Query: 506 CGVLVLARSLFDMIPA-KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
            G L  AR +F  +   +D +SW  M+  Y  H  G  A+  + +M   G+  D  +  S
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           VL A ++   +  G +F   +  +          + ++DL S+ G      R +      
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKL-IKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN 304

Query: 625 PDATIWGSLLCGCRIHHEV 643
           PD  +W +++ G  ++ ++
Sbjct: 305 PDLVLWNTMISGYSLYEDL 323


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/622 (40%), Positives = 367/622 (59%), Gaps = 45/622 (7%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +FDE++D++VV +N MI  Y+ N + +  L V+K M   GF  D+ T   VL   + 
Sbjct: 73  ARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSR 132

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             +L  G  +H   LK      +   N L+ MY KC  L  A +V +++  R VVSW SM
Sbjct: 133 SDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSM 192

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           ++ YA+ G F+ A+ L R M    ++P+   + S+L A                +     
Sbjct: 193 VSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPA----------------VTNTTS 236

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
            + LYV                 + +F ++  K ++SWN MI           A+ L+  
Sbjct: 237 DNVLYV-----------------KEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQ 279

Query: 450 MLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M  N  EPD V++  +LPA   L+AL  GR +H +  R  +  +  + NA++DMY KCG 
Sbjct: 280 MEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGC 339

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  AR++F+ +  +D++SWT +I+ YG  G G DA+A F +MR +G+ PD ++F+SVL A
Sbjct: 340 LRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAA 399

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSH+GL+D+G  +FN+M  EC I PKLEH+AC+VDLL R G + EAY FI  MP+ PD  
Sbjct: 400 CSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDER 458

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           +WG LL  CR++  + +    A+ +  L P+++GYYVLL+N+YA+A +W +V  +R  + 
Sbjct: 459 VWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIME 518

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
           R+G+KK PG S +E+   V+ F+AG  SHP +KKI   L  L  +MK  GY P+T  AL 
Sbjct: 519 RKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALH 578

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + +E +KE  L  HSEKLA+AF I+N   G  IRVTKNLRVCGDCH  AK +SK A REI
Sbjct: 579 DVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREI 638

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           ++RD++RFHHF++G CSC  +W
Sbjct: 639 IIRDTHRFHHFQEGCCSCGDYW 660



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 213/469 (45%), Gaps = 80/469 (17%)

Query: 96  TKTYCS-ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           T+  C+ IL    D+ +L   KK+H  +     +  +  +G KL+ ++  CG+    R +
Sbjct: 20  TEDLCNRILDQYPDINTL---KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHI 76

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------- 207
           F++I +  V  +N+++  Y     +K++L ++K M + G   D YT+ CVLK        
Sbjct: 77  FDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSL 136

Query: 208 -------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                    +A+ G  + +K+A ++ DE+  RDVVSWN M+S Y
Sbjct: 137 WVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVY 196

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             NG     LE+ +EM  L    +  TM ++L    N  +                    
Sbjct: 197 AQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTS-------------------- 236

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
             +N L   Y K         +F K+ ++SV+SW  MIA Y    +   A+ L+  M   
Sbjct: 237 --DNVL---YVK--------EMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEAN 283

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G+EPDV +I S+L A      L +G+ VH + +   +  +L + NAL+DMYAKCG + DA
Sbjct: 284 GVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDA 343

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASL 471
            +VFNQM  +D+VSW ++I           A+ +F  M  +   PD +    +L AC+  
Sbjct: 344 RAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHA 403

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
             L+ GR     +   GI+        +VD+  + G +  A      +P
Sbjct: 404 GLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMP 452



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 189/357 (52%), Gaps = 3/357 (0%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  TY  +L+  +   SL  G ++H  + + G+ ++  V G+ L+ M+  C  LKE ++V
Sbjct: 119 DMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYV-GNGLIAMYGKCKSLKEAQQV 177

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
            ++I    V  WN ++  Y++ G F ++L L ++M++L +  +  T + +L  +     S
Sbjct: 178 LDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNT-TS 236

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             V    ++F +L+ + V+SWN MI+ Y+ N + ++ + ++ +M   G   D+ ++V+VL
Sbjct: 237 DNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVL 296

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
               +  AL  GR VH FA +      +   N L+DMY+KCG L  A  VF +M  R VV
Sbjct: 297 PAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVV 356

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SWTS+I+ Y + G    A+ +F  M   G+ PD  A  S+L AC+  GLL+ G+   + +
Sbjct: 357 SWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLM 416

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLFVAM 450
            E  +   L     ++D+  + G + +A     QMP++ D   W  ++ A  ++  M
Sbjct: 417 AECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNM 473



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 159/338 (47%), Gaps = 46/338 (13%)

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L+ +Y+ CG+   A  +F+++ +++VV +  MI  Y    ++  A+ +++ M  +G  PD
Sbjct: 60  LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPD 119

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
           +Y    +L A +    L +G  +H  + +  +  +LYV N L+ MY KC S+ +A+ V +
Sbjct: 120 MYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLD 179

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALER 476
           ++P +D+VSWN+M+           AL+L   M   N +P+  TMA +LPA  +      
Sbjct: 180 EIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTN------ 233

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
                        +   NV      +YVK         +F  +  K +ISW +MIA Y  
Sbjct: 234 -------------TTSDNV------LYVK--------EMFLKLTKKSVISWNVMIAMYVN 266

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           +    +A+  ++ M   G+EPD VS +SVL A      +  G R       +  + P L 
Sbjct: 267 NSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERK-KLLPNLL 325

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
               ++D+ ++ G L +A      M    D   W S++
Sbjct: 326 LENALIDMYAKCGCLRDARAVFNQMQFR-DVVSWTSII 362



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 7/160 (4%)

Query: 478 REIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           +++HG +L    +  + +V   ++ +Y  CG   LAR +FD I  K+++ + +MI  Y  
Sbjct: 38  KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVN 97

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           +    DA+  +  M   G  PD  ++  VL A S S   D  W    +      I   L 
Sbjct: 98  NHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRS---DSLWVGLQIHGAVLKIGLDLN 154

Query: 597 HYA--CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
            Y    ++ +  +  +L EA + ++ +P   D   W S++
Sbjct: 155 LYVGNGLIAMYGKCKSLKEAQQVLDEIPCR-DVVSWNSMV 193


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 260/665 (39%), Positives = 376/665 (56%), Gaps = 48/665 (7%)

Query: 214 SRRVKDAHKLFDELSDR--DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
           SR +  A  LF  +  +  ++  WN +I  +         L +F +ML+ G   +  T  
Sbjct: 72  SRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFP 131

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++   CA   A    + +HA ALK         + +L+ MYS+ G+L  A  VF+K   R
Sbjct: 132 SLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLR 191

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLF---------------RGMVREG------------- 363
             VS+T++I GY  EG  D A RLF                G V+ G             
Sbjct: 192 DAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQ 251

Query: 364 ---IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
              + P+   + S+L AC     LE+GK +  ++++     +L + NAL+DMY+KCG + 
Sbjct: 252 EADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIG 311

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACA 469
            A  +F+ M  KD++ WNTMIG          AL LF  ML +N  P+ VT   +LPACA
Sbjct: 312 TARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACA 371

Query: 470 SLAALERGREIHGYILRH--GISADRNVA--NAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
           SL AL+ G+ +H YI ++  G     NV+   +I+ MY KCG + +A  +F  + ++ L 
Sbjct: 372 SLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLA 431

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           SW  MI+G  M+G    A+  F +M   G +PD+++F+ VL AC+ +G V+ G R+F+ M
Sbjct: 432 SWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSM 491

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
             +  I PKL+HY CM+DLL+R+G   EA   +  M + PD  IWGSLL  CRIH +V+ 
Sbjct: 492 NKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEF 551

Query: 646 AEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
            E VAE +FELEP+N+G YVLL+N+YA A +W++V K+R K++ +G+KK PGC+ IEI G
Sbjct: 552 GEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDG 611

Query: 706 KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEK 765
            V+ F+ G   HP ++ I  +L  +   ++  G+ P T   L + DE  KE AL  HSEK
Sbjct: 612 VVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEK 671

Query: 766 LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCS 825
           LA+AFG+++   G TIR+ KNLRVC +CH   K +SK   REI+ RD NRFHHFKDG CS
Sbjct: 672 LAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCS 731

Query: 826 CRGFW 830
           C   W
Sbjct: 732 CNDRW 736



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 204/388 (52%), Gaps = 26/388 (6%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+H YS+ G  + +  +F K        D+ +F+ ++      G+   V DA +LFDE+ 
Sbjct: 168 LIHMYSQVGELRHARLVFDK----STLRDAVSFTALITGYVSEGH---VDDARRLFDEIP 220

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            +DVVSWN MI+GY+ +G  E+ L  F  M     + + +TMV+VLS C +  +L  G+ 
Sbjct: 221 AKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKW 280

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           + ++     F K +   N L+DMYSKCG++  A ++F+ M ++ V+ W +MI GY    +
Sbjct: 281 IGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSL 340

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN- 407
           ++ A+ LF  M+RE + P+     ++L ACA  G L++GK VH YI +N ++ +  V+N 
Sbjct: 341 YEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKN-LKGTGNVNNV 399

Query: 408 ----ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-Q 452
               +++ MYAKCG +  AE VF  M  + + SWN MI           AL LF  M+ +
Sbjct: 400 SLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINE 459

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVL 511
            F+PD +T   +L AC     +E G      + + +GIS        ++D+  + G    
Sbjct: 460 GFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDE 519

Query: 512 ARSLF-DMIPAKDLISWTIMIAGYGMHG 538
           A+ L  +M    D   W  ++    +HG
Sbjct: 520 AKVLMGNMEMEPDGAIWGSLLNACRIHG 547



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 181/406 (44%), Gaps = 66/406 (16%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           G+  H+ +      + D V  + L+  +V+ G + + RR+F++I    V  WN ++  Y 
Sbjct: 176 GELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYV 235

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVL-------------------------KCLA 209
           ++G F+E+L  F +MQ   ++ +  T   VL                         K L 
Sbjct: 236 QSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQ 295

Query: 210 VV-------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
           +V            +  A KLFD + D+DV+ WN MI GY    + E+ L +F+ ML   
Sbjct: 296 LVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLREN 355

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFA---LKACFS-KEISFNNTLLDMYSKCGDL 318
              +  T + VL  CA+ GAL  G+ VHA+    LK   +   +S   +++ MY+KCG +
Sbjct: 356 VTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCV 415

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
           + A +VF  MG RS+ SW +MI+G A  G  + A+ LF  M+ EG +PD      +L AC
Sbjct: 416 EVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSAC 475

Query: 379 ACDGLLEIGKDVHDYI----KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
              G +E+G   H Y     K+  +   L     ++D+ A+ G   +A+ +   M     
Sbjct: 476 TQAGFVELG---HRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNM----- 527

Query: 435 VSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREI 480
                               EPDG     +L AC     +E G  +
Sbjct: 528 ------------------EMEPDGAIWGSLLNACRIHGQVEFGEYV 555



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 173/409 (42%), Gaps = 85/409 (20%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + + G  E+A+      +++ +  +  T  S+L  C  L+SLE GK + S +
Sbjct: 226 SWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWV 285

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   +  ++ + LV M+  CG++   R++F+ +++  V +WN ++  Y     ++E+
Sbjct: 286 RDRGFGKNLQLVNA-LVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEA 344

Query: 183 LYLFKKMQSLGIAADSYTFSCVL--------------------KCLAVVGNSRR------ 216
           L LF+ M    +  +  TF  VL                    K L   GN         
Sbjct: 345 LVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTS 404

Query: 217 ----------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                     V+ A ++F  +  R + SWN MISG   NG AE+ L +F+EM+N GF  D
Sbjct: 405 IIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPD 464

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             T V VLS C   G +  G                                    R F 
Sbjct: 465 DITFVGVLSACTQAGFVELGH-----------------------------------RYFS 489

Query: 327 KMGERSVVS-----WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            M +   +S     +  MI   AR G FD A  L   M    +EPD     S+L+AC   
Sbjct: 490 SMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNM---EMEPDGAIWGSLLNACRIH 546

Query: 382 GLLEIGKDVHDYIKENDMQSS-LYVSNALMDMYAKCGSMADAESVFNQM 429
           G +E G+ V + + E + ++S  YV   L ++YA  G   D   +  ++
Sbjct: 547 GQVEFGEYVAERLFELEPENSGAYV--LLSNIYAGAGRWDDVAKIRTKL 593


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 290/822 (35%), Positives = 415/822 (50%), Gaps = 128/822 (15%)

Query: 99  YCSILQLCA--DLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           Y   LQLC+  D  S    + VH+ +  SG     G   ++L+ M+    ++   R++F 
Sbjct: 14  YAEKLQLCSPQDPASFSLARAVHAHMIASGFK-PRGHFLNRLLEMYCKSSNVVYARQLFE 72

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           +I N        L+  Y   GN +           LG                     R 
Sbjct: 73  EIPNPDAIARTTLITAYCALGNLE-----------LG---------------------RE 100

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS- 275
           + +   L+     RD V +N MI+GY  NG     LE+F+ M    F  D  T  +VLS 
Sbjct: 101 IFNGTPLYM----RDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA 156

Query: 276 -----------GCANCGALMFGRA-VHAFALKACFS------------------------ 299
                      G  +C  +  G   V +  L A  S                        
Sbjct: 157 LVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFD 216

Query: 300 -----KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
                 E+++  T++  Y +  DL+GA  VFE M E    +W +MI+GY   G F  A+ 
Sbjct: 217 EMPKRDELTWT-TMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALT 275

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS----LYVSNALM 410
           L R M   GI+ D    T+I+ ACA  G  ++GK +H YI +N++  +    L VSNAL+
Sbjct: 276 LCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALI 335

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA--------------------------- 443
            +Y K   + +A  +F  MPV++I++WN ++                             
Sbjct: 336 TLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTV 395

Query: 444 --------------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
                         L LF  M L  FEP     A  L AC+ L ALE GR++H  ++  G
Sbjct: 396 MISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLG 455

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
             +  +V NA++ MY KCGV+  A S+F  +P+ DL+SW  MIA  G HG G  AI  F+
Sbjct: 456 YESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFD 515

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            M + G+ PD ++F++VL ACSH+GLV++G  +FN M     I P  +HYA MVDL  R 
Sbjct: 516 QMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRA 575

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           G  S A   I+ MP  P A +W +LL GCRIH  + L  + AE +F+L P N G YVLL+
Sbjct: 576 GMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLS 635

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           N+YA+  +W +V K+R+ +  + ++K P CSWIE++ KV++F+     HP    +   L+
Sbjct: 636 NIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLE 695

Query: 729 RLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLR 788
           +L LEMK+ GY P T++ L + +  +KE AL  HSEKLA+ FGI+ LP   T+RV KN+R
Sbjct: 696 QLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDATVRVFKNIR 755

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +CGDCH   KFMSK ARREI++RD  RFHHFK+G CSCR +W
Sbjct: 756 ICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 171/373 (45%), Gaps = 44/373 (11%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSE--KSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  +   G  ++A+ +         + D  TY +I+  CA++ S + GK++H+ I 
Sbjct: 257 WNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYIL 316

Query: 124 ESGIVIDDGV---LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           ++ +  +      + + L+ ++     + E R++F  +    +  WN ++  Y   G   
Sbjct: 317 KNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAG--- 373

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                              R+++A   F+E+  +++++   MIS
Sbjct: 374 -----------------------------------RMEEAKSFFEEMPVKNLLTLTVMIS 398

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G   NG  ++GL++FK+M   GF          L+ C+  GAL  GR +HA  +   +  
Sbjct: 399 GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYES 458

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            +S  N ++ MY+KCG ++ A  VF  M    +VSW SMIA   + G    AI LF  M+
Sbjct: 459 SLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQML 518

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM-DMYAKCGSM 419
           +EG+ PD     ++L AC+  GL+E G+   + + E+   +      A M D++ + G  
Sbjct: 519 KEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMF 578

Query: 420 ADAESVFNQMPVK 432
           + A  V + MP K
Sbjct: 579 SYARIVIDSMPSK 591


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/756 (35%), Positives = 396/756 (52%), Gaps = 98/756 (12%)

Query: 165 IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLF 224
           I N L+  YSK+     + YLF ++    I A +         +A    +  +K + K+F
Sbjct: 50  ILNRLIDIYSKSSKLNYARYLFDEIPQPDIVART-------TLIAAYSAAGDLKLSRKIF 102

Query: 225 DE--LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA---- 278
            +  L  RD V +N MI+ Y  N      +E+F +M    F  D  T  +VL   A    
Sbjct: 103 SDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAE 162

Query: 279 --------NCGALMFGRAVHAFALKACFSK------------------------------ 300
                   +C  +  G       L A  S                               
Sbjct: 163 KEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRD 222

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           E+S+  T++  Y K  DLD A        ++  V+W +MI+GYA  G++  A  +FR M+
Sbjct: 223 ELSWT-TIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMI 281

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDY----IKENDMQSSLYVSNALMDMYAKC 416
              I+ D +  TS++  CA  G   +GK++H Y    +       ++ V+NAL+  Y KC
Sbjct: 282 MSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKC 341

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIG---------------------------------- 442
           G +  A+ +FN+MP +D+VSWN ++                                   
Sbjct: 342 GKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLA 401

Query: 443 -------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  AL  F  M LQ FEP     A  + +C+ L +L+ GR++H  ++R+G  +  +
Sbjct: 402 QIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLS 461

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
             NA++ MY +CGV+  A  LF  +P  D ISW  MIA  G HG G  AI  F +M + G
Sbjct: 462 AGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEG 521

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           I PD +SF++V+ ACSH+GLV EG ++F+ M     + P  EHYA ++DLL R G  SEA
Sbjct: 522 ILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEA 581

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
              +E MP  P A IW +LL GCRIH  + L  + AE +FEL+P + G YVLL+N+YA A
Sbjct: 582 KEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVA 641

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +W ++ K+R+ +  RG+KK PGCSWIE++ KV+ F+ G ++HP  ++I + L++L LEM
Sbjct: 642 GQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEM 701

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           ++ GY P T+  L + +   KE  L  HSEKLA+A+G + LP G T+RV KNLR+CGDCH
Sbjct: 702 RKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCH 761

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              KFMSK   REIV+RD  RFHHF+DG+CSC  +W
Sbjct: 762 NAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 172/380 (45%), Gaps = 58/380 (15%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  +   G   +A E+      SKI  D  T+ S++ +CA+      GK++H+   
Sbjct: 257 WNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFL 316

Query: 124 ESGIVIDDGV---LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           ++       V   + + L+  +  CG +   + +FNK+    +  WN+++  Y       
Sbjct: 317 KTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYV------ 370

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                           N R + +A   F+E+ +++++SW  MIS
Sbjct: 371 --------------------------------NVRCMDEAKSFFNEMPEKNILSWIIMIS 398

Query: 241 GYIANGVAEKGLEVFKEMLNLGFN-VDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           G    G AE+ L+ F  M   GF   D A    ++S C+  G+L  GR +HA  ++  + 
Sbjct: 399 GLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIIS-CSVLGSLKHGRQLHAQVVRYGYE 457

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
             +S  N L+ MY++CG +D A  +F  M     +SW +MIA   + G    AI LF  M
Sbjct: 458 SSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEM 517

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA-------LMDM 412
           ++EGI PD  +  +++ AC+  GL++ G+      K  D   ++Y  N        ++D+
Sbjct: 518 LKEGILPDRISFLTVISACSHAGLVKEGR------KYFDSMHNVYGVNPDEEHYARIIDL 571

Query: 413 YAKCGSMADAESVFNQMPVK 432
             + G  ++A+ V   MP +
Sbjct: 572 LCRAGKFSEAKEVMESMPFE 591



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 33/125 (26%)

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
            R +H +++  G     ++ N ++D+Y K   L  AR LFD IP  D+++ T +IA Y  
Sbjct: 32  ARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSA 91

Query: 537 HG---------------------------------FGCDAIATFNDMRQAGIEPDEVSFI 563
            G                                  G  AI  F DM++    PD  +F 
Sbjct: 92  AGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFT 151

Query: 564 SVLYA 568
           SVL A
Sbjct: 152 SVLGA 156


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 262/775 (33%), Positives = 406/775 (52%), Gaps = 44/775 (5%)

Query: 99   YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
            + S+L  C  ++SLE G+++H ++ + G   D  V  + LV ++   G L     +F+ +
Sbjct: 274  FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA-LVSLYFHLGSLISAEHIFSNM 332

Query: 159  DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKC---------- 207
                   +N L++  S+ G  ++++ LFK+MQ  G+  DS T  S V+ C          
Sbjct: 333  SQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQ 392

Query: 208  --------LAVVGNSR-------------RVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                    L    N +              ++ A   F E    +VV WN M+  Y    
Sbjct: 393  QLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLD 452

Query: 247  VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
                   +F++M       +  T  ++L  C   G L  G  +H+  +K  F       +
Sbjct: 453  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCS 512

Query: 307  TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
             L+DMY+K G LD A  +  +   + VVSWT+MIAGY +    D A+  FR M+  GI  
Sbjct: 513  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 572

Query: 367  DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
            D   +T+ + ACA    L+ G+ +H     +   S L   NAL+ +Y+KCG++ +A   F
Sbjct: 573  DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAF 632

Query: 427  NQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALE 475
             Q    D ++WN ++           AL +F  M  +  + +  T    + A +  A ++
Sbjct: 633  EQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMK 692

Query: 476  RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
            +G+++H  I + G  ++  V NAI+ MY KCG +  A+  F  +  K+ +SW  MI  Y 
Sbjct: 693  QGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYS 752

Query: 536  MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
             HGFG +A+ +F+ M  + + P+ V+ + VL ACSH GLVD+G  +F  M  E  + PK 
Sbjct: 753  KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKP 812

Query: 596  EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
            EHY C+VD+L+R G LS A  FI  MP+ PDA +W +LL  C +H  +++ E  A H+ E
Sbjct: 813  EHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 872

Query: 656  LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
            LEP+++  YVLL+N+YA   KW+     R+K+  +G+KK PG SWIE+K  ++ F  G  
Sbjct: 873  LEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 932

Query: 716  SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
            +HP A +I    K L       GY       L    + +K+  +  HSEKLA++FG+L+L
Sbjct: 933  NHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSL 992

Query: 776  PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            PA   I V KNLRVC DCH+  KF+SK + REI++RD+ RFHHF+ G CSC+ +W
Sbjct: 993  PATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 164/570 (28%), Positives = 261/570 (45%), Gaps = 47/570 (8%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
           SL++G+K+HS I + G   ++  L  KL+  ++  GDL    +VF+++    +F WN ++
Sbjct: 83  SLDEGRKLHSQILKLGF-DNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMI 141

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------------------------ 206
            E +      +   LF +M +  +  +  TFS VL+                        
Sbjct: 142 KELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGL 201

Query: 207 ------CLAVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                 C  ++    R   V  A ++FD L  +D  SW  MISG   N    + + +F +
Sbjct: 202 GKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCD 261

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           M  LG         +VLS C    +L  G  +H   LK  FS +    N L+ +Y   G 
Sbjct: 262 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGS 321

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           L  A  +F  M +R  V++ ++I G ++ G  + A+ LF+ M  +G+EPD   + S++ A
Sbjct: 322 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVA 381

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           C+ DG L  G+ +H Y  +    S+  +  AL+++YAKC  +  A + F +  V+++V W
Sbjct: 382 CSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLW 441

Query: 438 NTMIGALDLFVAMLQNFE-----------PDGVTMACILPACASLAALERGREIHGYILR 486
           N M+ A  L   +  +F            P+  T   IL  C  L  LE G +IH  I++
Sbjct: 442 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 501

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
                +  V + ++DMY K G L  A  +      KD++SWT MIAGY  + F   A+ T
Sbjct: 502 TSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 561

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
           F  M   GI  DEV   + + AC+    + EG +  +           L     +V L S
Sbjct: 562 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYS 620

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           + GN+ EAY   E    A D   W +L+ G
Sbjct: 621 KCGNIEEAYLAFEQTE-AGDNIAWNALVSG 649



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 157/568 (27%), Positives = 267/568 (47%), Gaps = 47/568 (8%)

Query: 98  TYCSILQLC-ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           T+  +L+ C     + +  +++H+ I   G+     ++ + L+ ++   G +   RRVF+
Sbjct: 171 TFSGVLEACRGGSVAFDVVEQIHARIIYQGLG-KSTIVCNPLIDLYSRNGFVDRARRVFD 229

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---------- 206
            +       W  ++   SK     E++ LF  M  LGI    Y FS VL           
Sbjct: 230 GLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 289

Query: 207 -------------------CLAVVG---NSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
                              C A+V    +   +  A  +F  +S RD V++N +I+G   
Sbjct: 290 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQ 349

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G  EK +E+FK M   G   D  T+ +++  C++ G L  G+ +HA+  K  F+     
Sbjct: 350 CGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKI 409

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
              LL++Y+KC D++ A+  F +    +VV W  M+  Y        + R+FR M  E I
Sbjct: 410 EGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI 469

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
            P+ Y   SIL  C   G LE+G+ +H  I +   Q + YV + L+DMYAK G +  A  
Sbjct: 470 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWD 529

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAA 473
           +  +   KD+VSW TMI           AL  F  ML +    D V +   + ACA L A
Sbjct: 530 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 589

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           L+ G++IH      G S+D    NA+V +Y KCG +  A   F+   A D I+W  +++G
Sbjct: 590 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSG 649

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           +   G   +A+  F  M + GI+ +  +F S + A S +  + +G +   ++  +   + 
Sbjct: 650 FQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVIT-KTGYDS 708

Query: 594 KLEHYACMVDLLSRTGNLSEAYR-FIEM 620
           + E    ++ + ++ G++S+A + F+E+
Sbjct: 709 ETEVCNAIISMYAKCGSISDAKKQFLEL 736



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 228/510 (44%), Gaps = 54/510 (10%)

Query: 221 HKLFDELSDRDVVSWNCMI--SGYIANGVAEKGLEVFKE-----MLNLGFNVDLATMVTV 273
           H +  +L  R V+   C I  + + A  V+    E F+E     + N G   +  T+  +
Sbjct: 14  HGVPRKLKTRTVLRTLCQIRRASFTAISVSISEDESFQENGIDSVENCGIRPNHQTLKWL 73

Query: 274 LSGCANC-GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           L GC    G+L  GR +H+  LK  F      +  LLD Y   GDLDGA++VF++M ER+
Sbjct: 74  LEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERT 133

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL-LEIGKDVH 391
           + +W  MI   A   +      LF  MV E + P+    + +L AC    +  ++ + +H
Sbjct: 134 IFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIH 193

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
             I    +  S  V N L+D+Y++ G +  A  VF+ + +KD  SW  MI          
Sbjct: 194 ARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEV 253

Query: 443 -ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            A+ LF  M +    P     + +L AC  + +LE G ++HG +L+ G S+D  V NA+V
Sbjct: 254 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 313

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
            +Y   G L+ A  +F  +  +D +++  +I G    G+G  A+  F  M+  G+EPD  
Sbjct: 314 SLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSN 373

Query: 561 SFISVLYACSHSGLVDEGWR-------------------FFNMMRYECNIEPKLEHY--- 598
           +  S++ ACS  G +  G +                     N+     +IE  L ++   
Sbjct: 374 TLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLET 433

Query: 599 -----------ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
                           LL    N    +R +++  + P+   + S+L  C    +++L E
Sbjct: 434 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 493

Query: 648 KVAEHVFELEPDNTGYYV-LLANVYAEAEK 676
           ++   + +       Y   +L ++YA+  K
Sbjct: 494 QIHSQIIKTSFQLNAYVCSVLIDMYAKLGK 523


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/778 (34%), Positives = 419/778 (53%), Gaps = 91/778 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  ++ S+++ C  L       ++H+++ + G  ++  +  S +V M+V CGD+     V
Sbjct: 145 DPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNS-VVGMYVKCGDVDLAETV 203

Query: 155 FNKIDNGKVFIWNLLMHEYSKT-GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           F  I+   +F WN +++ YS+  G +K                                 
Sbjct: 204 FFDIERPSLFCWNSMIYGYSQMYGPYK--------------------------------- 230

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
                 A ++F+ + +RD VSWN +IS +  +G   + L +F EM N GF+ +  T  +V
Sbjct: 231 ------ALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSV 284

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           LS CA+   L +G  +HA  L+   S ++ F N L+DMY+KCG LD A RVF+ + E   
Sbjct: 285 LSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDH 344

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           +SW S+I G    G+ + A+ LF  M R  +  D + + +IL  C+       G+ +H Y
Sbjct: 345 ISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGY 404

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA---------- 443
             ++ M SS  V NA++ MYAKCG    A+ VF  MP+++ +SW  MI A          
Sbjct: 405 TIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKA 464

Query: 444 -------------------------------LDLFVAMLQN-FEPDGVTMACILPACASL 471
                                          L L+V+M  N  +PD +T    + ACA L
Sbjct: 465 RGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADL 524

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           A ++ G ++  +  + G+S + +VAN+IV MY +CG++  A++ FD I  KDLISW  M+
Sbjct: 525 AIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAML 584

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           A +  +G G   I TF DM +   +P+ +S++SVL  CSH GLV EG  +F+ M     I
Sbjct: 585 AAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGI 644

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P  EH++CMVDLL R G L +A   IE MP  P+AT+W +LL  CR+HH+++LAE  A+
Sbjct: 645 SPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAK 704

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            + EL+ + +  YVLL+N+Y+E+ + + V  +R+ +  +G++ + GCSWIE+  +V++F 
Sbjct: 705 KLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFT 764

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFG 771
              +SHP  K++   L+ +   ++  G +     ++  + +         HSEKLA AFG
Sbjct: 765 VDETSHPQIKEVYLKLEEMMKMIEDTGKYITVESSVHRSKKY--------HSEKLAFAFG 816

Query: 772 ILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           +LNLP+   I V KNLRVC DCH + K +S    RE+++RD  RFHHFKDG CSC+ +
Sbjct: 817 LLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 219/487 (44%), Gaps = 86/487 (17%)

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR 230
           H YS  G   ++  +F++     I    +T++ +++ L    +S R+ DA KLFDE+  R
Sbjct: 51  HMYSNCGLTHDAFQVFQETHHRNI----FTWNTMIRALV---SSSRMSDAEKLFDEMPVR 103

Query: 231 --DVVSWNCMISGYIANGVAEKGLEVFKEML----NLGFNVDLATMVTVLSGCANCGALM 284
             D VSW  MISGY  NG   +  E F  M+    + G N D  +  +V+  C + G   
Sbjct: 104 VKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSR 163

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD------------------------- 319
               +HA   K  F  E    N+++ MY KCGD+D                         
Sbjct: 164 LAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYS 223

Query: 320 ------GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
                  A+++F +M ER  VSW ++I+ +++ G     + +F  M  +G  P+     S
Sbjct: 224 QMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGS 283

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD 433
           +L ACA    L+ G  +H  I   +    L   N L+DMYAKCG +  A+ VF  +   D
Sbjct: 284 VLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHD 343

Query: 434 IVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHG 482
            +SWN++I           AL LF  M + +   D   +  IL  C+       G  +HG
Sbjct: 344 HISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHG 403

Query: 483 YILRHGISADRNVANAIVDMYVKCG-------VLVL------------------------ 511
           Y ++ G+ +   V NAI+ MY KCG       V  L                        
Sbjct: 404 YTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGK 463

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           AR  FDM+P +++++W  M++ Y  +GF  + +  +  MR  G++PD ++F + + AC+ 
Sbjct: 464 ARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACAD 523

Query: 572 SGLVDEG 578
             +V  G
Sbjct: 524 LAIVKLG 530



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 190/458 (41%), Gaps = 110/458 (24%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV------------ 333
            R +HA  + +     +   N LL MYS CG    A +VF++   R++            
Sbjct: 27  ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86

Query: 334 ---------------------VSWTSMIAGYAREGVFDGAIRLFRGMVRE----GIEPDV 368
                                VSWT+MI+GY++ G    +   F  M+R+    G   D 
Sbjct: 87  SSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP 146

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV--- 425
           ++ TS++ AC   G   +   +H  + +        + N+++ MY KCG +  AE+V   
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206

Query: 426 ----------------------------FNQMPVKDIVSWNTMIG----------ALDLF 447
                                       FN+MP +D VSWNT+I            L +F
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMF 266

Query: 448 VAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
           V M  Q F P+ +T   +L ACAS + L+ G  +H  ILR   S D    N ++DMY KC
Sbjct: 267 VEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKC 326

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G L LA+ +F  +   D ISW  +I G    G G DA+  FN MR++ +  DE    ++L
Sbjct: 327 GCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTIL 386

Query: 567 YACS-----HSGLVDEGWRFFN-------------MMRYECNIEPKLE------------ 596
             CS      +G +  G+   +              M  +C    K +            
Sbjct: 387 GVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTI 446

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
            +  M+   SR+G++ +A  + +MMP   +   W S+L
Sbjct: 447 SWTAMITAFSRSGDIGKARGYFDMMP-ERNIVTWNSML 483



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 123/307 (40%), Gaps = 87/307 (28%)

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL--------------------------- 444
           MY+ CG   DA  VF +   ++I +WNTMI AL                           
Sbjct: 52  MYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWT 111

Query: 445 ----------------DLFVAML-------QNFEPDGVTMACILPACASLAALERGREIH 481
                           + F  M+       +N++P   +   ++ AC SL       ++H
Sbjct: 112 TMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP--FSFTSVMKACGSLGDSRLAIQLH 169

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARS--------------------------- 514
             + + G   +  + N++V MYVKCG + LA +                           
Sbjct: 170 ALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPY 229

Query: 515 ----LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
               +F+ +P +D +SW  +I+ +  HGFG   +A F +M   G  P+ +++ SVL AC+
Sbjct: 230 KALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACA 289

Query: 571 HSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
            +  +  G      ++R E +++  L     ++D+ ++ G L  A R  + +    D   
Sbjct: 290 STSDLKWGAHLHARILRMEHSLD--LVFGNGLIDMYAKCGCLDLAKRVFKSLR-EHDHIS 346

Query: 630 WGSLLCG 636
           W SL+ G
Sbjct: 347 WNSLITG 353


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 263/748 (35%), Positives = 405/748 (54%), Gaps = 64/748 (8%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+  C    + +  F+ ++   ++ W  L+  ++ +G  KE+L   ++M+  G+  D+ T
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 201 FSCVLKCLAVVGNSRRVKDAHKLFDELSD------------------------------- 229
           F   +  L   G+   ++D  ++   + D                               
Sbjct: 61  F---ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFA 117

Query: 230 -----RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALM 284
                R+V+SW+ M   +  +G   + L  F+ ML LG     + MVT+LS C++   + 
Sbjct: 118 KMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 177

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE--RSVVSWTSMIAG 342
            GR +H+    + F  E+   N ++ MY +CG ++ A +VF+ M E  R VVSW  M++ 
Sbjct: 178 DGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLST 237

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           Y        AI+L++ M    + PD     S+L AC+    + +G+ +H  I  ++++ +
Sbjct: 238 YVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKN 294

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL----------DLFVAML- 451
           + V NAL+ MYAKCGS  +A +VF++M  + I+SW T+I A            LF  ML 
Sbjct: 295 VIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLE 354

Query: 452 -------QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
                  Q  +PD +    IL ACA ++ALE+G+ +       G+S+D+ V  A+V++Y 
Sbjct: 355 LEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYG 414

Query: 505 KCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
           KCG +  AR +FD + ++ D+  W  MIA Y   G   +A+  F  M   G+ PD  SF+
Sbjct: 415 KCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFV 474

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYEC-NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           S+L ACSH+GL D+G  +F  M  E  N+   ++H+ C+ DLL R G L EA  F+E +P
Sbjct: 475 SILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLP 534

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           V PDA  W SLL  CR H ++K A++VA  +  LEP     YV L+N+YAE +KW  V K
Sbjct: 535 VKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAK 594

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R+ ++ +G+KK  G S IEI   ++ F  G  +HP  ++I   L +L  +MK  GY P 
Sbjct: 595 VRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPD 654

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           T+  L   DE EKE  L  HSE+LA+A G+++ P G  +RVTKNLRVC DCH   K +SK
Sbjct: 655 TKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISK 714

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
            A R+IV+RD  RFH FKDG+CSC+ +W
Sbjct: 715 IAGRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 239/502 (47%), Gaps = 61/502 (12%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T+ + L  C D +SL DG ++H ++ +S + ID  V  + L+ M+  CG L   +
Sbjct: 55  RPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKV-SNALLNMYKKCGSLSHAK 113

Query: 153 RVFNKIDNGK-VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------ 205
           RVF K++  + V  W+++   ++  GN  E+L  F+ M  LGI A       +L      
Sbjct: 114 RVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSP 173

Query: 206 ----------KCLAVVGNSRR----------------VKDAHKLFDELSD--RDVVSWNC 237
                      C+A+ G                    V++A K+FD + +  RDVVSWN 
Sbjct: 174 ALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNI 233

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+S Y+ N   +  +++++ M       D  T V++LS C++   +  GR +H   +   
Sbjct: 234 MLSTYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDE 290

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
             K +   N L+ MY+KCG    A  VF+KM +RS++SWT++I+ Y R  +   A  LF+
Sbjct: 291 LEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQ 350

Query: 358 GMVR-------EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            M+        + ++PD  A  +IL+ACA    LE GK V +      + S   V  A++
Sbjct: 351 QMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVV 410

Query: 411 DMYAKCGSMADAESVFNQMPVK-DIVSWNTMIG----------ALDLFVAM-LQNFEPDG 458
           ++Y KCG + +A  +F+ +  + D+  WN MI           AL LF  M ++   PD 
Sbjct: 411 NLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDS 470

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVAN--AIVDMYVKCGVLVLARSLF 516
            +   IL AC+     ++G+     +     +  R + +   + D+  + G L  A    
Sbjct: 471 FSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFL 530

Query: 517 DMIPAK-DLISWTIMIAGYGMH 537
           + +P K D ++WT ++A    H
Sbjct: 531 EKLPVKPDAVAWTSLLAACRNH 552



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/414 (21%), Positives = 167/414 (40%), Gaps = 75/414 (18%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           LY   + + D  TY S+L  C+  + +  G+ +H  I    +   + ++G+ LV M+  C
Sbjct: 250 LYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELE-KNVIVGNALVSMYAKC 308

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-------QSLGIAADS 198
           G   E R VF+K++   +  W  ++  Y +     E+ +LF++M        S  +  D+
Sbjct: 309 GSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDA 368

Query: 199 YTFSCVLKCLAVV--------------------------------GNSRRVKDAHKLFDE 226
             F  +L   A V                                G    +++A ++FD 
Sbjct: 369 LAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDA 428

Query: 227 LSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
           +  R DV  WN MI+ Y   G + + L++F  M   G   D  + V++L  C++ G    
Sbjct: 429 VCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQ 488

Query: 286 GRAVHAFALKAC--FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAG 342
           G++            ++ I     + D+  + G L  A    EK+  +   V+WTS++A 
Sbjct: 489 GKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAA 548

Query: 343 YAREGVFDGAIRLFRGMVREGIEP----------DVYAITSILHACAC-------DGL-- 383
                    A  +   ++R  +EP          ++YA     HA A         G+  
Sbjct: 549 CRNHRDLKRAKEVANKLLR--LEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKK 606

Query: 384 ------LEIGKDVHDYIKENDMQS-SLYVSNALMDMYAK---CGSMADAESVFN 427
                 +EIGK +HD+   +D    +  +   L  ++++   CG + D + V +
Sbjct: 607 ERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLH 660


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 282/838 (33%), Positives = 439/838 (52%), Gaps = 130/838 (15%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           I+ L     ++ +   +H+ +  + ++ D  +    L F+ ++  +L    ++ +     
Sbjct: 38  IIDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFL-LSVNNLDCAHQILSYSHEP 96

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-----SC------------- 203
           +  IWN L+    K G  +E L  +  M + G+  D  TF     +C             
Sbjct: 97  ESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVH 156

Query: 204 --VLKC------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
             +LKC            + +     ++K+  +LF++++ RDV+SWN MIS Y+  G+  
Sbjct: 157 GRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYR 216

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L++F EML  G   D  TMV+++S CA    L  G+ +H + +        S  N L+
Sbjct: 217 EALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLV 276

Query: 310 DMYSKCGDLD---------------------------------GAIRVFEKMGERSVVSW 336
           DMYSKCG +D                                  A ++F+KM ERS+VSW
Sbjct: 277 DMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSW 336

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T+M++GY + G +  ++ LF+ M  E + PD  A+ ++L AC      ++G+ VH +I  
Sbjct: 337 TTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVT 396

Query: 397 NDMQSSLYVSNALMDMYAKCG---------------------SMAD----------AESV 425
             M    ++ NAL+D+YAKCG                     SM D          A   
Sbjct: 397 YGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDF 456

Query: 426 FNQMPVKDIVSWNTMIGAL---DLFVAMLQ--------NFEPDGVTMACILPACASLAAL 474
           FN++P KDIVSWNTM+ A    DLF    +        N +PD  T+  +L +CA + AL
Sbjct: 457 FNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGAL 516

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
             G  ++ YI ++ I  D  +  A++DMY KCG + +A  +F  I  K++  WT M+A Y
Sbjct: 517 NHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAY 576

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
            M G   +AI  + +M + G++PD V+FI++L ACSH GLVDEG+++FN +R   NI P 
Sbjct: 577 AMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPT 636

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
           + HY CMVDLL R G+L E  +FIE MP+ PD +IW SL+  CR HH V+LAE+  + + 
Sbjct: 637 IHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLI 696

Query: 655 ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG 714
           E++P N G +VLL+N+YA+A +W++V K+R K+   G+ K PG + IE  G V+ FVA  
Sbjct: 697 EIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVA-- 754

Query: 715 SSHPHAKKIESLLKRL--RLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
            S+  +  I  +L+ +  RL +K+E     ++                 HSE+LA+AFG+
Sbjct: 755 -SNLVSADILCMLQDIERRLLVKQELSDTTSQ-----------------HSERLAVAFGL 796

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +N      IRV  ++R+C DCH + K +S+   REIV+RD+ RFH F DG CSC+ +W
Sbjct: 797 INNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYRFHRFTDGHCSCKDYW 854


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 287/832 (34%), Positives = 434/832 (52%), Gaps = 89/832 (10%)

Query: 77  GNLEKAMEVLYS----SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIV-IDD 131
           GN   A+  L S    S + ++D       ++  A L+     + +H+     G++    
Sbjct: 34  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 93

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
             + + L+  +  CG L     VF  I +          H+     +   +L LF++   
Sbjct: 94  PAVANALLTAYARCGRLAAALEVFGSISDSA--------HDAVSFNSLISALCLFRRWDH 145

Query: 192 L----------GIAADSYTFSCVLKCLAVV------------------------GNSR-- 215
                      G    S+T   VL+ ++ +                        G+ R  
Sbjct: 146 ALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFA 205

Query: 216 ------------RVKDAHKLFDELSDR--DVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                        V DA +LF   +    DVV+WN M+S  + +G+ ++ ++   +M+ L
Sbjct: 206 FNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVAL 265

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN----TLLDMYSKCGD 317
           G   D  T  + L  C+    L  GR +HA+ +K     E++ N+     L+DMY+    
Sbjct: 266 GVRPDGVTFASALPACSRLELLDVGREMHAYVIK---DDELAANSFVASALVDMYATHEQ 322

Query: 318 LDGAIRVFEKMGE--RSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAITSI 374
           +  A +VF+ + +  + +  W +MI GYA+ G+ + A+RLF  M  E G  P    + S+
Sbjct: 323 VGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASV 382

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L ACA        + VH Y+ +  M  + +V NALMDMYA+ G    A  +F  + + D+
Sbjct: 383 LPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDV 442

Query: 435 VSWNTMI----------GALDLFVAMLQNFE----PDGVTMACILPACASLAALERGREI 480
           VSWNT+I           A  L   M Q  E    P+ +T+  +LP CA LAA  RG+EI
Sbjct: 443 VSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 502

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           HGY +RH +  D  V +A+VDMY KCG L L+R++FD +P ++ I+W ++I  YGMHG G
Sbjct: 503 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLG 562

Query: 541 CDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
            +A   F+ M  +G   P+EV+F++ L ACSHSG+VD G + F+ M  +  +EP  +  A
Sbjct: 563 GEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILA 622

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVA-PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
           C+VD+L R G L EAY  +  M       + W ++L  CR+H  V L E   E + ELEP
Sbjct: 623 CVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEP 682

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
           +   +YVLL N+Y+ A +W    ++R ++ RRG+ K PGCSWIE+ G ++ F+AG S+HP
Sbjct: 683 EEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHP 742

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
            ++++ + ++ L  EM   GY P T   L + D+ +K   L  HSEKLA+AFG+L    G
Sbjct: 743 ASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPG 802

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            TIRV KNLRVC DCHE AKF+SK   REIVLRD  RFHHF++G+CSC  +W
Sbjct: 803 ATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 132/334 (39%), Gaps = 53/334 (15%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK---TYCSILQLCADLKSLEDGKKVHSII 122
           +NA I  + + G  E+A+ +    E          T  S+L  CA  ++    + VH  +
Sbjct: 343 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYV 402

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+   +  + + L+ M+   G     RR+F  +D   V  WN L+      G+  ++
Sbjct: 403 VKRGMA-GNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 461

Query: 183 LYLFKKMQSL---GIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------ 221
             L ++MQ L   G+  ++ T   +L   A++    R K+ H                  
Sbjct: 462 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSAL 521

Query: 222 --------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVD 266
                          +FD L  R+ ++WN +I  Y  +G+  +   +F  M   G    +
Sbjct: 522 VDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 581

Query: 267 LATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
             T +  L+ C++ G +  G +  HA                ++D+  + G LD A  + 
Sbjct: 582 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 641

Query: 326 EKM--GERSVVSWTSMIAGYAREGVFDGAIRLFR 357
             M  GE+ V +W++M+          GA RL R
Sbjct: 642 TSMETGEQQVSAWSTML----------GACRLHR 665


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/718 (37%), Positives = 406/718 (56%), Gaps = 63/718 (8%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VF+ +       +N ++  Y +   F  +  LF KM       D ++++ +L   A    
Sbjct: 55  VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPH----KDLFSWNLMLTGYA---R 107

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN---LGFNVDLATM 270
           +RR++DA  LFD + ++DVVSWN M+SGY+ +G  ++  +VF  M +   + +N  LA  
Sbjct: 108 NRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAY 167

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           V         G L   R +  F  K+ +  E+   N L+  Y K   L  A ++F+++  
Sbjct: 168 V-------RSGRLEEARRL--FESKSDW--ELISCNCLMGGYVKRNMLGDARQLFDQIPV 216

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R ++SW +MI+GYA++G    A RLF     E    DV+  T++++A   DG+L+  + V
Sbjct: 217 RDLISWNTMISGYAQDGDLSQARRLFE----ESPVRDVFTWTAMVYAYVQDGMLDEARRV 272

Query: 391 HDYI------------------KENDMQSSLYVS---------NALMDMYAKCGSMADAE 423
            D +                  K  DM   L+           N ++  Y + G +A A 
Sbjct: 273 FDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQAR 332

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLA 472
           ++F+ MP +D VSW  +I           A+++ V M ++ E  +  T  C L ACA +A
Sbjct: 333 NLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIA 392

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           ALE G+++HG ++R G      V NA+V MY KCG +  A  +F  +  KD++SW  M+A
Sbjct: 393 ALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLA 452

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           GY  HGFG  A+  F  M  AG++PDE++ + VL ACSH+GL D G  +F+ M  +  I 
Sbjct: 453 GYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGIT 512

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P  +HYACM+DLL R G L EA   I  MP  PDA  WG+LL   RIH  ++L E+ AE 
Sbjct: 513 PNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEM 572

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           VF++EP N+G YVLL+N+YA + +W +V K+R K+ + G++K PG SW+E++ K++ F  
Sbjct: 573 VFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTV 632

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G   HP   +I + L+ L L+MK EGY   T+  L + +E EK+  L  HSEKLA+AFGI
Sbjct: 633 GDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGI 692

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           L +P+G+ IRV KNLRVC DCH   K +SK   R I++RDS+R+HHF +G CSCR +W
Sbjct: 693 LTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 234/519 (45%), Gaps = 68/519 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           +YNA I  +        A ++    +    D  ++  +L   A  + L D + +   + E
Sbjct: 66  SYNAMISGYLRNAKFSLARDLF--DKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPE 123

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
             +V  + +L       +V  G + E R VF+++ +     WN L+  Y ++G  +E+  
Sbjct: 124 KDVVSWNAMLSG-----YVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARR 178

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR--VKDAHKLFDELSDRDVVSWNCMISGY 242
           LF+        +D    SC   CL + G  +R  + DA +LFD++  RD++SWN MISGY
Sbjct: 179 LFES------KSDWELISC--NCL-MGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGY 229

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             +G   +   +F+E        D+ T   ++      G L   R V     +    +E+
Sbjct: 230 AQDGDLSQARRLFEE----SPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQ---KREM 282

Query: 303 SFN------------------------------NTLLDMYSKCGDLDGAIRVFEKMGERS 332
           S+N                              N ++  Y + GDL  A  +F+ M +R 
Sbjct: 283 SYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRD 342

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
            VSW ++IAGYA+ G+++ A+ +   M R+G   +       L ACA    LE+GK VH 
Sbjct: 343 SVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHG 402

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
            +     +    V NAL+ MY KCG + +A  VF  +  KDIVSWNTM+           
Sbjct: 403 QVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQ 462

Query: 443 ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIV 500
           AL +F +M+    +PD +TM  +L AC+     +RG E  H     +GI+ +      ++
Sbjct: 463 ALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMI 522

Query: 501 DMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
           D+  + G L  A++L   +P   D  +W  ++    +HG
Sbjct: 523 DLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHG 561



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 177/422 (41%), Gaps = 80/422 (18%)

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           +  + + G  D A+ VF+ M  R+ VS+ +MI+GY R   F  A  LF  M  +    D+
Sbjct: 40  ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHK----DL 95

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           ++   +L   A +  L   + + D + E D+ S     NA++  Y + G + +A  VF++
Sbjct: 96  FSWNLMLTGYARNRRLRDARMLFDSMPEKDVVS----WNAMLSGYVRSGHVDEARDVFDR 151

Query: 429 MPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           MP K+ +SWN                         +L A      LE  R     +    
Sbjct: 152 MPHKNSISWNG------------------------LLAAYVRSGRLEEARR----LFESK 183

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
              +    N ++  YVK  +L  AR LFD IP +DLISW  MI+GY   G    A   F 
Sbjct: 184 SDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFE 243

Query: 549 DMRQAGIEP--DEVSFISVLYACSHSGLVDEGWRFFNMM-------------------RY 587
           +       P  D  ++ +++YA    G++DE  R F+ M                   R 
Sbjct: 244 E------SPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRM 297

Query: 588 ECNIE-------PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           +   E       P +  +  M+    + G+L++A    +MMP   D+  W +++ G   +
Sbjct: 298 DMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMP-QRDSVSWAAIIAG---Y 353

Query: 641 HEVKLAEKVAEHVFELEPD----NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
            +  L E+    + E++ D    N   +    +  A+    E  K++  ++ R G +K  
Sbjct: 354 AQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEK-- 411

Query: 697 GC 698
           GC
Sbjct: 412 GC 413



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 16/239 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G  E+AM +L   ++    ++  T+C  L  CAD+ +LE GK+VH  +
Sbjct: 345 SWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQV 404

Query: 123 CESGIVIDDGVL-GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             +G   + G L G+ LV M+  CG + E   VF  + +  +  WN ++  Y++ G  ++
Sbjct: 405 VRTGY--EKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQ 462

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWN----- 236
           +L +F+ M + G+  D  T   VL   +  G + R     + F  ++    ++ N     
Sbjct: 463 ALTVFESMITAGVKPDEITMVGVLSACSHTGLTDR---GTEYFHSMNKDYGITPNSKHYA 519

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           CMI      G  E+   + +   N+ F  D AT   +L      G +  G        K
Sbjct: 520 CMIDLLGRAGCLEEAQNLIR---NMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFK 575


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 287/832 (34%), Positives = 434/832 (52%), Gaps = 89/832 (10%)

Query: 77  GNLEKAMEVLYS----SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIV-IDD 131
           GN   A+  L S    S + ++D       ++  A L+     + +H+     G++    
Sbjct: 34  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 93

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
             + + L+  +  CG L     VF  I +          H+     +   +L LF++   
Sbjct: 94  PAVANALLTAYARCGRLAAALEVFGSISDSA--------HDAVSFNSLISALCLFRRWDH 145

Query: 192 L----------GIAADSYTFSCVLKCLAVV------------------------GNSR-- 215
                      G    S+T   VL+ ++ +                        G+ R  
Sbjct: 146 ALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFA 205

Query: 216 ------------RVKDAHKLFDELSDR--DVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                        V DA +LF   +    DVV+WN M+S  + +G+ ++ ++   +M+ L
Sbjct: 206 FNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVAL 265

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN----TLLDMYSKCGD 317
           G   D  T  + L  C+    L  GR +HA+ +K     E++ N+     L+DMY+    
Sbjct: 266 GVRPDGVTFASALPACSRLELLDVGREMHAYVIK---DDELAANSFVASALVDMYATHEQ 322

Query: 318 LDGAIRVFEKMGE--RSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAITSI 374
           +  A +VF+ + +  + +  W +MI GYA+ G+ + A+RLF  M  E G  P    + S+
Sbjct: 323 VGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASV 382

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L ACA        + VH Y+ +  M  + +V NALMDMYA+ G    A  +F  + + D+
Sbjct: 383 LPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDV 442

Query: 435 VSWNTMI----------GALDLFVAMLQNFE----PDGVTMACILPACASLAALERGREI 480
           VSWNT+I           A  L   M Q  E    P+ +T+  +LP CA LAA  RG+EI
Sbjct: 443 VSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 502

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           HGY +RH +  D  V +A+VDMY KCG L L+R++FD +P ++ I+W ++I  YGMHG G
Sbjct: 503 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLG 562

Query: 541 CDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
            +A   F+ M  +G   P+EV+F++ L ACSHSG+VD G + F+ M  +  +EP  +  A
Sbjct: 563 GEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILA 622

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVA-PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
           C+VD+L R G L EAY  +  M       + W ++L  CR+H  V L E   E + ELEP
Sbjct: 623 CVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEP 682

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
           +   +YVLL N+Y+ A +W    ++R ++ RRG+ K PGCSWIE+ G ++ F+AG S+HP
Sbjct: 683 EEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHP 742

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
            ++++ + ++ L  EM   GY P T   L + D+ +K   L  HSEKLA+AFG+L    G
Sbjct: 743 ASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPG 802

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            TIRV KNLRVC DCHE AKF+SK   REIVLRD  RFHHF++G+CSC  +W
Sbjct: 803 ATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 132/334 (39%), Gaps = 53/334 (15%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK---TYCSILQLCADLKSLEDGKKVHSII 122
           +NA I  + + G  E+A+ +    E          T  S+L  CA  ++    + VH  +
Sbjct: 343 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYV 402

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+   +  + + L+ M+   G     RR+F  +D   V  WN L+      G+  ++
Sbjct: 403 VKRGMA-GNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 461

Query: 183 LYLFKKMQSL---GIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------ 221
             L ++MQ L   G+  ++ T   +L   A++    R K+ H                  
Sbjct: 462 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSAL 521

Query: 222 --------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVD 266
                          +FD L  R+ ++WN +I  Y  +G+  +   +F  M   G    +
Sbjct: 522 VDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 581

Query: 267 LATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
             T +  L+ C++ G +  G +  HA                ++D+  + G LD A  + 
Sbjct: 582 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 641

Query: 326 EKM--GERSVVSWTSMIAGYAREGVFDGAIRLFR 357
             M  GE+ V +W++M+          GA RL R
Sbjct: 642 TSMEAGEQQVSAWSTML----------GACRLHR 665


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 287/832 (34%), Positives = 434/832 (52%), Gaps = 89/832 (10%)

Query: 77  GNLEKAMEVLYS----SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIV-IDD 131
           GN   A+  L S    S + ++D       ++  A L+     + +H+     G++    
Sbjct: 36  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 95

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
             + + L+  +  CG L     VF  I +          H+     +   +L LF++   
Sbjct: 96  PAVANALLTAYARCGRLAAALEVFGSISDSA--------HDAVSFNSLISALCLFRRWDH 147

Query: 192 L----------GIAADSYTFSCVLKCLAVV------------------------GNSR-- 215
                      G    S+T   VL+ ++ +                        G+ R  
Sbjct: 148 ALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFA 207

Query: 216 ------------RVKDAHKLFDELSDR--DVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                        V DA +LF   +    DVV+WN M+S  + +G+ ++ ++   +M+ L
Sbjct: 208 FNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVAL 267

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN----TLLDMYSKCGD 317
           G   D  T  + L  C+    L  GR +HA+ +K     E++ N+     L+DMY+    
Sbjct: 268 GVRPDGVTFASALPACSRLELLDVGREMHAYVIK---DDELAANSFVASALVDMYATHEQ 324

Query: 318 LDGAIRVFEKMGE--RSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAITSI 374
           +  A +VF+ + +  + +  W +MI GYA+ G+ + A+RLF  M  E G  P    + S+
Sbjct: 325 VGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASV 384

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L ACA        + VH Y+ +  M  + +V NALMDMYA+ G    A  +F  + + D+
Sbjct: 385 LPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDV 444

Query: 435 VSWNTMI----------GALDLFVAMLQNFE----PDGVTMACILPACASLAALERGREI 480
           VSWNT+I           A  L   M Q  E    P+ +T+  +LP CA LAA  RG+EI
Sbjct: 445 VSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 504

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           HGY +RH +  D  V +A+VDMY KCG L L+R++FD +P ++ I+W ++I  YGMHG G
Sbjct: 505 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLG 564

Query: 541 CDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
            +A   F+ M  +G   P+EV+F++ L ACSHSG+VD G + F+ M  +  +EP  +  A
Sbjct: 565 GEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILA 624

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVA-PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
           C+VD+L R G L EAY  +  M       + W ++L  CR+H  V L E   E + ELEP
Sbjct: 625 CVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEP 684

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
           +   +YVLL N+Y+ A +W    ++R ++ RRG+ K PGCSWIE+ G ++ F+AG S+HP
Sbjct: 685 EEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHP 744

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
            ++++ + ++ L  EM   GY P T   L + D+ +K   L  HSEKLA+AFG+L    G
Sbjct: 745 ASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPG 804

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            TIRV KNLRVC DCHE AKF+SK   REIVLRD  RFHHF++G+CSC  +W
Sbjct: 805 ATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 132/334 (39%), Gaps = 53/334 (15%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK---TYCSILQLCADLKSLEDGKKVHSII 122
           +NA I  + + G  E+A+ +    E          T  S+L  CA  ++    + VH  +
Sbjct: 345 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYV 404

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+   +  + + L+ M+   G     RR+F  +D   V  WN L+      G+  ++
Sbjct: 405 VKRGMA-GNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 463

Query: 183 LYLFKKMQSL---GIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------ 221
             L ++MQ L   G+  ++ T   +L   A++    R K+ H                  
Sbjct: 464 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSAL 523

Query: 222 --------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVD 266
                          +FD L  R+ ++WN +I  Y  +G+  +   +F  M   G    +
Sbjct: 524 VDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 583

Query: 267 LATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
             T +  L+ C++ G +  G +  HA                ++D+  + G LD A  + 
Sbjct: 584 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 643

Query: 326 EKM--GERSVVSWTSMIAGYAREGVFDGAIRLFR 357
             M  GE+ V +W++M+          GA RL R
Sbjct: 644 TSMETGEQQVSAWSTML----------GACRLHR 667


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/712 (35%), Positives = 395/712 (55%), Gaps = 47/712 (6%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------------- 209
           F+ N+++  ++  G  + +L  ++ M + G   D +TF  V+KC A              
Sbjct: 73  FLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSA 132

Query: 210 -----------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
                        GNS          V DA ++FD +  RD+V+WN M+ GY++NG+   
Sbjct: 133 AIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGAL 192

Query: 251 GLEVFKEMLN-LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
            L+ F+EM   L    D   ++  L+ C    ALM GR VHA+ ++    +++    +LL
Sbjct: 193 ALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLL 252

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           DMY KCG +  A  +F  M  R+VV+W  MI GYA  G  + A   F  M  EG + +V 
Sbjct: 253 DMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVV 312

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
              ++L ACA       G+ VH Y+  +     + +  AL++MY+K G +  +E++F QM
Sbjct: 313 TAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQM 372

Query: 430 PVKDIVSWNTMIGA----------LDLFVAML-QNFEPDGVTMACILPACASLAALERGR 478
             K +VSWN MI A          + LF+ +L Q   PD  TM+ ++PA   L  L + R
Sbjct: 373 TNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCR 432

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           ++H YI+R     +  V NA++ MY +CG +V +R +FD +  KD+ISW  +I GY +HG
Sbjct: 433 QMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHG 492

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
            G  A+  F++M+  G++P+E +F+SVL ACS SG+ DEGW  FN+M+ +  I P++EHY
Sbjct: 493 QGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHY 552

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
            CM DLL R G+L E  +FIE +P+ P   IWGSLL   R  +++ +AE  AE +FELE 
Sbjct: 553 GCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEH 612

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
           DNTG YV+L+++YA+A +WE+V+++R  +  +GL++    S +E+ G    FV G  +HP
Sbjct: 613 DNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHP 672

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
            +K I  +   L  ++    Y P+     I+     + +    HS +LA+ FG+++  A 
Sbjct: 673 QSKTIHEVSDVLSRKIGETDY-PRNLSDPISLTS-RRTIIPNKHSVRLAVVFGLISSEAR 730

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             I V KN+R+C  CH   K +SK +RR IV+ D+N +H F DG C C  +W
Sbjct: 731 APILVKKNVRICNHCHHALKLISKYSRRRIVVGDTNIYHEFLDGSCCCGDYW 782



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 235/499 (47%), Gaps = 54/499 (10%)

Query: 17  PPNQSYGKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEV 76
           PP +   K+  S K   L    + + H +  +  + +S    L      +N  I  F + 
Sbjct: 34  PPPRVRPKRGPSLKSLVLSHAAAGRMHDA--LAAVRSSPDAFL------HNVVIRGFADA 85

Query: 77  GNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G  E A+    +  +  ++ D  T+  +++ CA L +LE+G+  HS     G+V  +   
Sbjct: 86  GLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYT 145

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM----- 189
           G+ L+  +   G + +  RVF+ +    +  WN ++  Y   G    +L  F++M     
Sbjct: 146 GNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQ 205

Query: 190 -QSLGIAADSYTFSCVLKCLAVVGNSRR---------------------------VKDAH 221
            Q  G+   +   +C L    + G                               +  A 
Sbjct: 206 VQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAE 265

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
            +F  +  R VV+WNCMI GY  NG  E+  + F +M   G  V++ T + +L+ CA   
Sbjct: 266 GMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTE 325

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
           + ++GR+VH +  ++ F   +     LL+MYSK G +  +  +F +M  +++VSW +MIA
Sbjct: 326 SSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIA 385

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
            Y  + +++ AI LF  ++ + + PD + +++++ A    GLL   + +H YI   D   
Sbjct: 386 AYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGE 445

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
           +  V+NA+M MYA+CG +  +  +F++M  KD++SWNT+I           AL++F  M 
Sbjct: 446 NTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMK 505

Query: 452 QN-FEPDGVTMACILPACA 469
            N  +P+  T   +L AC+
Sbjct: 506 SNGLQPNESTFVSVLTACS 524



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 229/468 (48%), Gaps = 23/468 (4%)

Query: 220 AHKLFDEL----SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           A ++ D L    S  D    N +I G+   G+ E  L  ++ ML  G   D  T   V+ 
Sbjct: 56  AGRMHDALAAVRSSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVK 115

Query: 276 GCANCGALMFGRAVHAFALK-ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            CA  GAL  GRA H+ A++      E+   N+LL  Y+K G +  A RVF+ M  R +V
Sbjct: 116 CCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIV 175

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREG--IEPDVYAITSILHACACDGLLEIGKDVHD 392
           +W SM+ GY   G+   A+  FR M  EG  ++ D   I + L AC  D  L  G++VH 
Sbjct: 176 TWNSMVDGYVSNGLGALALDCFREM-HEGLQVQHDGVGIIAALAACCLDSALMQGREVHA 234

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           Y+  + ++  + V  +L+DMY KCG++A AE +F  MP + +V+WN MIG          
Sbjct: 235 YVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEE 294

Query: 443 ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           A D FV M  +  + + VT   +L ACA   +   GR +HGY+ R        +  A+++
Sbjct: 295 AFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLE 354

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY K G +  + ++F  +  K L+SW  MIA Y       +AI  F ++    + PD  +
Sbjct: 355 MYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFT 414

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
             +V+ A    GL+ +  +  + +      E  L   A M  + +R G++  + +  + M
Sbjct: 415 MSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVM-HMYARCGDVVSSRKIFDKM 473

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL 667
               D   W +++ G  IH + K+A ++   +    L+P+ + +  +L
Sbjct: 474 -AGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVL 520



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 149/346 (43%), Gaps = 60/346 (17%)

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAME--VLYSSEKSKIDTKTYCSILQLCADLKSLE 113
           S+T+V     +N  IG +   G  E+A +  V   +E  +++  T  ++L  CA  +S  
Sbjct: 273 SRTVV----TWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSL 328

Query: 114 DGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
            G+ VH  +  S   +   VL + L+ M+   G +K    +F ++ N  +  WN ++  Y
Sbjct: 329 YGRSVHGYVTRSQF-LPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAY 387

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------ 221
                + E++ LF ++ +  +  D +T S V+    ++G  R+ +  H            
Sbjct: 388 MYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENT 447

Query: 222 --------------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                               K+FD+++ +DV+SWN +I GY  +G  +  LE+F EM + 
Sbjct: 448 LVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSN 507

Query: 262 GFNVDLATMVTVLSGC-----ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
           G   + +T V+VL+ C     A+ G + F      + +      +I     + D+  + G
Sbjct: 508 GLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGII----PQIEHYGCMTDLLGRAG 563

Query: 317 DLDGAIRVFEKMGERSVVS-WTSM-----------IAGYAREGVFD 350
           DL   ++  E +        W S+           IA YA E +F+
Sbjct: 564 DLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFE 609


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/614 (39%), Positives = 364/614 (59%), Gaps = 11/614 (1%)

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
           ++ +   +N MI G ++       + ++  M       D  T   VL  CA       G 
Sbjct: 65  TNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGV 124

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            +H+   K  F  ++     ++  YSKCG L  A +VF+ M  ++VVSWT MI G    G
Sbjct: 125 MIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFG 184

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
            F  A+ LFRG++  G+ PD + I  +L ACA  G LE G+ +   ++E  +  +++V+ 
Sbjct: 185 KFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVAT 244

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEP 456
           +L+DMY KCGSM +A  VF+ M  KDIV W+ MI           A++LF  M + N  P
Sbjct: 245 SLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRP 304

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           D   M   L +CASL ALE G    G +      ++  +  +++D Y KCG +  A  ++
Sbjct: 305 DCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVY 364

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
            M+  KD + +  +I+G  M+G    A   F  M + GI P+E +F+ +L  C+H+GLVD
Sbjct: 365 KMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVD 424

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           +G  +FN M ++ ++ P +EHY CMVDLL+R G L EA+  I+ MP+  +  +WGSLL G
Sbjct: 425 DGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGG 484

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
           CR+H E +LAE V + + ELEP N+G+YVLL+N+Y+ + +W+E +K+R  ++ +G++K P
Sbjct: 485 CRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLP 544

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
           G SW+E+ G V+ F+ G +SHP ++KI   L+ L  ++K  GY P T + L + +E EKE
Sbjct: 545 GYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKE 604

Query: 757 VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
             L  HSEKLA+AF +++  A   IRV KNLRVCGDCHE  K +SK   REIV+RD+NRF
Sbjct: 605 HFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRF 664

Query: 817 HHFKDGRCSCRGFW 830
           H F DG CSCR +W
Sbjct: 665 HCFSDGACSCRDYW 678



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 217/480 (45%), Gaps = 48/480 (10%)

Query: 105 LCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKV 163
           + + LK L+  K  H  +    +  D+ +L   L        + +    VF+K   N   
Sbjct: 10  IASGLKCLKHAKLAHCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNT 69

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--------LAVVGNSR 215
           F++N ++        F  +++L+  M    I  DS+TFS VLK         L V+ +S 
Sbjct: 70  FLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSL 129

Query: 216 RVK------------------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
             K                        DA K+FD++  ++VVSW  MI G I  G   + 
Sbjct: 130 VFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREA 189

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           +++F+ +L  G   D   +V VL  CA  G L  GR +     +   S+ +    +L+DM
Sbjct: 190 VDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDM 249

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+KCG ++ A  VF+ M E+ +V W++MI GYA  G+   AI LF  M +  + PD YA+
Sbjct: 250 YTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAM 309

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
              L +CA  G LE+G      +   +  S+  +  +L+D YAKCGSM +A  V+  M  
Sbjct: 310 VGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKE 369

Query: 432 KDIVSWNTMIGALDLFVAMLQNF-----------EPDGVTMACILPACASLAALERGREI 480
           KD V +N +I  L ++  +   F            P+  T   +L  C     ++ GR  
Sbjct: 370 KDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHY 429

Query: 481 HGYILRHGISADRNVAN--AIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
               + H  S    + +   +VD+  + G L  A +L   +P K ++I W  ++ G  +H
Sbjct: 430 FNS-MSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLH 488



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 204/447 (45%), Gaps = 37/447 (8%)

Query: 36  IIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI- 94
           I+ S+ + S+    PI           T  YN  I           A+ +  S  K+ I 
Sbjct: 42  ILRSTINFSNNAQYPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIV 101

Query: 95  -DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
            D+ T+  +L+ CA L     G  +HS++ ++G   D  V  + +V  +  CG L++  +
Sbjct: 102 PDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFV-KTNVVCFYSKCGFLRDAWK 160

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-------- 205
           VF+ +    V  W  ++    + G F+E++ LF+ +   G+  D +    VL        
Sbjct: 161 VFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGD 220

Query: 206 --------KCLAVVGNSRRV----------------KDAHKLFDELSDRDVVSWNCMISG 241
                   +C+   G SR V                ++A  +FD + ++D+V W+ MI G
Sbjct: 221 LESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQG 280

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y +NG+  + +E+F EM  +    D   MV  LS CA+ GAL  G           F   
Sbjct: 281 YASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSN 340

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
                +L+D Y+KCG ++ A+ V++ M E+  V + ++I+G A  G    A  +F  M +
Sbjct: 341 PVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGK 400

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMA 420
            GI P+ +    +L  C   GL++ G+   + +  +  +  ++     ++D+ A+ G + 
Sbjct: 401 FGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLD 460

Query: 421 DAESVFNQMPVK-DIVSWNTMIGALDL 446
           +A ++   MP+K +++ W +++G   L
Sbjct: 461 EAHNLIKGMPMKANVIVWGSLLGGCRL 487


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/625 (38%), Positives = 366/625 (58%), Gaps = 28/625 (4%)

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           +W+ +I  Y ++ +       F  M +L    +     ++L             ++HA  
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE---------------RSVVSWTS 338
           ++     ++   N L++ Y+K  +      VF K GE               R VVSW +
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 339 MIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           +IAG+A+ G++  A+ + R M + G ++PD + ++SIL   A    +  GK++H Y   N
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLF 447
                +++ ++L+DMYAKC  +  +   F  +P KD +SWN++I            L  F
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316

Query: 448 VAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             ML +N +P  V+ + ++PACA L AL  GR++HG I+R G   +  +A+++VDMY KC
Sbjct: 317 RRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKC 376

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G + +AR +FD I  +D+++WT +I G  MHG   DA++ F +M + G+ P  V+F++VL
Sbjct: 377 GNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVL 436

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI-EMMPVAP 625
            ACSH+GLVDEGWR+FN M  +  I P LEHYA + DLL R G L EAY FI  M  V P
Sbjct: 437 TACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQP 496

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
             ++W  LL  CR H  V+LAEKV + +  ++ +N G YVL++N+Y+ A++W++  +LR 
Sbjct: 497 TGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRI 556

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            + ++GLKK P CSWIE+  +V+ F+AG  SHP+  KI   L  L  +M++EGY   T  
Sbjct: 557 HMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQ 616

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L + DE  K   L  HSE+LA+A+GI++  AG TIRV KN+RVC DCH   KF++K   
Sbjct: 617 VLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVG 676

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REI +RD++RFHHFK+G CSC  +W
Sbjct: 677 REITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 166/363 (45%), Gaps = 56/363 (15%)

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAV 210
           ++VF+ +    V  WN ++  +++ G + E+L + ++M   G +  DS+T S +L   A 
Sbjct: 180 KKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAE 239

Query: 211 VGNSRRVKDAH--------------------------------KLFDELSDRDVVSWNCM 238
             +  + K+ H                                + F  L  +D +SWN +
Sbjct: 240 HVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSI 299

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I+G + NG  ++GL  F+ ML         +  +V+  CA+  AL  GR +H   ++  F
Sbjct: 300 IAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGF 359

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
                  ++L+DMY+KCG++  A  VF+++ +R +V+WT++I G A  G    A+ LF  
Sbjct: 360 DDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFEN 419

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCG 417
           M+ +G+ P   A  ++L AC+  GL++ G    + ++ +  +   L    A+ D+  + G
Sbjct: 420 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAG 479

Query: 418 SMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERG 477
            + +A                        F++ ++  +P G   + +L AC +  ++E  
Sbjct: 480 RLEEAYD----------------------FISNMRGVQPTGSVWSILLAACRAHKSVELA 517

Query: 478 REI 480
            ++
Sbjct: 518 EKV 520



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 36/252 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  I  F + G   +A++++    K+   K D+ T  SIL + A+   +  GK++H  
Sbjct: 193 SWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGY 252

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
              +G    D  +GS L+ M+  C  L+   R F  +       WN ++    + G F  
Sbjct: 253 AVRNGF-DGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDR 311

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLK----------------CLAVVG------------- 212
            L  F++M    +   + +FS V+                 C+  +G             
Sbjct: 312 GLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVD 371

Query: 213 ---NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                  +K A  +FD +  RD+V+W  +I G   +G A   + +F+ ML  G       
Sbjct: 372 MYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVA 431

Query: 270 MVTVLSGCANCG 281
            + VL+ C++ G
Sbjct: 432 FMAVLTACSHAG 443


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 244/608 (40%), Positives = 359/608 (59%), Gaps = 12/608 (1%)

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           +N ++   +  G  E  L +F EML++     D  T+   L  C+    L  GR + A+A
Sbjct: 86  YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           +K     +    ++L+ MY+ C D+  A  +F+ + E  VV W ++I  Y + G +   +
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
            +F+GM+  G+  D   + S++ AC   G  ++GK V +Y+ E  +  +  +  AL+DMY
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMY 265

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMA 462
           AKCG +  A  +F+ M  +D+V+W+ MI           AL LF  M L   EP+ VTM 
Sbjct: 266 AKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMV 325

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            +L ACA L ALE G+ +H YI R  +S    +  A+VD Y KCG +  A   F+ +P K
Sbjct: 326 SVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           +  +WT +I G   +G G +A+  F+ MR+A IEP +V+FI VL ACSHS LV+EG R F
Sbjct: 386 NSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHF 445

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
           + M  +  I+P+ EHY C+VDLL R G + EAY+FI  MP+ P+A IW +LL  C +H  
Sbjct: 446 DSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKN 505

Query: 643 VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIE 702
           V++ E+  + +  L P ++G Y+LL+N+YA   +W+    +R+++  RG++K PGCS IE
Sbjct: 506 VEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIE 565

Query: 703 IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGH 762
           + G V  F A  S HP  K+I   ++ +   +K  GY P T    +  DE EKEV++  H
Sbjct: 566 LDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHH 625

Query: 763 SEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
           SEKLA+AFG++ L  G TIR++KNLRVC DCH   K +SK   REIV+RD NRFHHFKDG
Sbjct: 626 SEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDG 685

Query: 823 RCSCRGFW 830
            CSC  +W
Sbjct: 686 TCSCNDYW 693



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 203/418 (48%), Gaps = 46/418 (11%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLK-----CLAVVGNS----- 214
           +N+LM      G+ +++L+LF +M  +  +  D +T +C LK     C   VG       
Sbjct: 86  YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145

Query: 215 ----------------------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL 252
                                 R V  A  LFD + +  VV WN +I+ Y+ NG   + +
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           E+FK ML +G   D  T+V+V++ C   G    G+ V  +  +    +  +    L+DMY
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMY 265

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           +KCG+L  A R+F+ M  R VV+W++MI+GY +      A+ LF  M    +EP+   + 
Sbjct: 266 AKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMV 325

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           S+L ACA  G LE GK VH YI+   +  ++ +  AL+D YAKCG + DA   F  MPVK
Sbjct: 326 SVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385

Query: 433 DIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIH 481
           +  +W  +I           AL+LF +M + + EP  VT   +L AC+    +E GR   
Sbjct: 386 NSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHF 445

Query: 482 GYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
             + + +GI         +VD+  + G++  A      +P + + + W  +++   +H
Sbjct: 446 DSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVH 503



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 194/418 (46%), Gaps = 38/418 (9%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVH 119
           T  YN  +      G+ E A+ +   +        D  T    L+ C+ + +L+ G+ + 
Sbjct: 83  TPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQ 142

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
           +   + G++ D  VL S L+ M+ +C D+   + +F+ ++   V +WN ++  Y K GN+
Sbjct: 143 AYAVKRGLMADRFVLSS-LIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNW 201

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK--------------------- 218
            E + +FK M  +G+A D  T   V+     +G+++  K                     
Sbjct: 202 MEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTAL 261

Query: 219 -----------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                       A +LFD +  RDVV+W+ MISGY       + L +F EM       + 
Sbjct: 262 IDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPND 321

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            TMV+VLS CA  GAL  G+ VH++  +   S  I     L+D Y+KCG +D A+  FE 
Sbjct: 322 VTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFES 381

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M  ++  +WT++I G A  G    A+ LF  M +  IEP       +L AC+   L+E G
Sbjct: 382 MPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEG 441

Query: 388 KDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           +   D + ++  ++        ++D+  + G + +A      MP++ + V W  ++ +
Sbjct: 442 RRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSS 499


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 270/754 (35%), Positives = 418/754 (55%), Gaps = 61/754 (8%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           K++  +L      + L  GK +H++  +S IV     L +  V ++  CG L   R  F+
Sbjct: 9   KSFRDLLLKSVAERDLFTGKSLHALYVKS-IVASSTYLSNHFVNLYSKCGCLSYARAAFD 67

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
             +   VF +N+++  Y+K                     DS                 +
Sbjct: 68  STEEPNVFSYNVIVKAYAK---------------------DS-----------------K 89

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           +  A +LFDE    D VS+N +ISGY         + +FK M  LGF VD  T+  +++ 
Sbjct: 90  IHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAA 149

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVS 335
           C  C  +   + +H FA+   F    S NN  +  YSK G L  A+ VF  M G R  VS
Sbjct: 150 C--CDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVS 207

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W SMI  Y +      A+ L++ M+ +G + D++ + S+L+A      L  G+  H  + 
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267

Query: 396 ENDMQSSLYVSNALMDMYAKCGS---MADAESVFNQMPVKDIVSWNTMIG---------- 442
           +     + +V + L+D Y+KCG    M+D+E VF ++   D+V WNTMI           
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSE 327

Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR-NVANAI 499
            A+  F  M +    PD  +  C+  AC++L++  +G++IHG  ++  I ++R +V NA+
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNAL 387

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + +Y K G L+ AR +FD +P  + +S+  MI GY  HG G +A+  +  M  +GI P+ 
Sbjct: 388 ISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNN 447

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           ++F+++L AC+H G VDEG ++FN M+    IEP+ EHY+CM+DLL R G L EA RFI+
Sbjct: 448 ITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFID 507

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP  P +  W +LL  CR H  + LAE+ A+ +  ++P     YV+LAN+YA+A KWEE
Sbjct: 508 AMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEE 567

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           +  +R+ +  + ++K PGCSWIE+K K ++FVA   SHP  +++   L+ +  +MK+ GY
Sbjct: 568 MASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGY 627

Query: 740 FPKTRYALIN---ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
               ++A++    A E E+E+ L  HSEKLA+AFG+++   G+ I V KNLR+CGDCH  
Sbjct: 628 VMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIVVVKNLRICGDCHNA 687

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KFMS  A REI++RD+ RFH FKDG+CSC  +W
Sbjct: 688 IKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 135/290 (46%), Gaps = 42/290 (14%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG---DLK 149
           KID  T  S+L     L  L  G++ H  + ++G   +  V GS L+  +  CG    + 
Sbjct: 237 KIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV-GSGLIDFYSKCGGRDGMS 295

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYS-KTGNFKESLYLFKKMQSLGIAADSYTFSCV---- 204
           +  +VF +I +  + +WN ++  YS    + +E++  F++MQ +G   D  +F CV    
Sbjct: 296 DSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355

Query: 205 -----------LKCLAVVGN--SRRVK----------------DAHKLFDELSDRDVVSW 235
                      +  LA+  N  S R+                 DA ++FD + + + VS+
Sbjct: 356 SNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSF 415

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           NCMI GY  +G   + L +++ ML+ G   +  T V +LS CA+CG +  G+  +   +K
Sbjct: 416 NCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQK-YFNTMK 474

Query: 296 ACF--SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAG 342
             F    E    + ++D+  + G L+ A R  + M  +   V+W +++  
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/622 (40%), Positives = 357/622 (57%), Gaps = 44/622 (7%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +FD   +++VV +N MI  Y+ N +  + L +F+ ML+  FN D  T   VL  C+ 
Sbjct: 90  ARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSG 149

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L  G  VH   +K      +   N L+ MY KCG L  A +V ++M  R VVSW SM
Sbjct: 150 LDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSM 209

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           +AGYA+ G FD A+ + + M    +  D   + S L    C   LE  + +H+       
Sbjct: 210 VAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYTSLENVQYIHN------- 261

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
                                    +F +M  K+++SWN MI           A+ LF+ 
Sbjct: 262 -------------------------MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQ 296

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M +   +PD VT+A +LPAC  L+AL  GR +H YI +  +  +  + NA++DMY KCG 
Sbjct: 297 MEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGC 356

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  AR +FD +  +D++SWT M++ YG  G G DA+A F  M  +G  PD ++F+SVL A
Sbjct: 357 LEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSA 416

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSH+GL+D+G  +F MM  +  I P++EH+ACMVDL  R G + EAY FI+ MP+ P+  
Sbjct: 417 CSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNER 476

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           +WG+LL  CR+H ++ +    A+ +F+L P  +GYYVLL+N+YA+A  W++V  +R  + 
Sbjct: 477 VWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMK 536

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
           + G+KK PG S +E+ G+V+ F+AG   HP AK I   L  L  +MK  GY P+T  AL 
Sbjct: 537 KIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALH 596

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + +  +KE  L  HSEKLA+ F ILN   G  IR+TKNLRVCGDCH   K +SK   R I
Sbjct: 597 DVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNI 656

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           ++RD NRFHHF +G CSC  +W
Sbjct: 657 IVRDCNRFHHFSNGICSCGDYW 678



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 191/352 (54%), Gaps = 6/352 (1%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRR 153
           D  T+  +L+ C+ L +L  G +VH  I + G+  D  + +G+ LV M+  CG L+E R+
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL--DTNLFIGNALVAMYGKCGCLREARK 193

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           V +++    V  WN ++  Y+++G F ++L + K+M SL +  D+ T +  L  +    +
Sbjct: 194 VLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYTS 252

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
              V+  H +F+ ++ ++++SWN MI+ Y+ N +  + + +F +M   G   D  T+ ++
Sbjct: 253 LENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L  C +  AL  GR +H +  K      +   N LLDMY+KCG L+ A  VF+KM  R V
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDV 372

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSWTSM++ Y R G    A+ LF  M+  G  PD  A  S+L AC+  GLL+ G+     
Sbjct: 373 VSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRM 432

Query: 394 IKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           + E   +   +     ++D++ + G + +A S   QMP++ +   W  ++ A
Sbjct: 433 MTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 221/475 (46%), Gaps = 81/475 (17%)

Query: 91  KSKIDTKTYCS-ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           K ++ +K  C  IL     +K+L    K+HS I  +  +  D  L  KL+  +   G+  
Sbjct: 32  KVEVFSKEACEVILDQYPGIKTL---NKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETS 88

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
             R +F++     V  +N+++  Y     + E+L +F+ M S     D YTF CVLK  +
Sbjct: 89  VARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACS 148

Query: 210 VVGNSRR--------------------------------VKDAHKLFDELSDRDVVSWNC 237
            + N R                                 +++A K+ D++  RDVVSWN 
Sbjct: 149 GLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNS 208

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M++GY  +G  +  LE+ KEM +L  N D  TM ++                        
Sbjct: 209 MVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL------------------------ 244

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
                    + +  Y+   ++     +FE+M +++++SW  MIA Y    + + A+ LF 
Sbjct: 245 ---------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFL 295

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M   G++PD   I S+L AC     L +G+ +H YI++ ++Q +L + NAL+DMYAKCG
Sbjct: 296 QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCG 355

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILP 466
            + +A  VF++M ++D+VSW +M+           A+ LF  ML + + PD +    +L 
Sbjct: 356 CLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLS 415

Query: 467 ACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           AC+    L++GR     +  ++GI         +VD++ + G +  A S    +P
Sbjct: 416 ACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMP 470



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 139/300 (46%), Gaps = 24/300 (8%)

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPD 457
           LM  Y+  G  + A  +F++   K++V +N MI           AL +F  ML   F PD
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
             T  C+L AC+ L  L  G ++H  I++ G+  +  + NA+V MY KCG L  AR + D
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            +P +D++SW  M+AGY   G   DA+    +M    +  D  +  S+     ++ L  E
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSL--E 254

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP---VAPDATIWGSLL 634
             ++ + M +E   +  L  +  M+ +       +EA      M    + PDA    SLL
Sbjct: 255 NVQYIHNM-FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN----VYAEAEKWEEVKKLREKISRR 690
             C     + L  ++ +++   E  N    +LL N    +YA+    EE + + +K+  R
Sbjct: 314 PACGDLSALFLGRRLHKYI---EKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLR 370



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 5/212 (2%)

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
           ++   +  D  +A  ++  Y   G   +AR +FD    K+++ + +MI  Y  +    +A
Sbjct: 62  VINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEA 121

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           ++ F  M      PD  +F  VL ACS    +  G +  + +  +  ++  L     +V 
Sbjct: 122 LSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI-VKVGLDTNLFIGNALVA 180

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD-NTG 662
           +  + G L EA + ++ MP   D   W S++ G     +   A ++ + +  L  + + G
Sbjct: 181 MYGKCGCLREARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAG 239

Query: 663 YYVLLANV--YAEAEKWEEVKKLREKISRRGL 692
               L+ V  Y   E  + +  + E+++++ L
Sbjct: 240 TMASLSPVVCYTSLENVQYIHNMFERMTKKNL 271


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/622 (40%), Positives = 357/622 (57%), Gaps = 44/622 (7%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +FD   +++VV +N MI  Y+ N +  + L +F+ ML+  FN D  T   VL  C+ 
Sbjct: 90  ARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSG 149

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L  G  VH   +K      +   N L+ MY KCG L  A +V ++M  R VVSW SM
Sbjct: 150 LDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSM 209

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           +AGYA+ G FD A+ + + M    +  D   + S L    C   LE  + +H+       
Sbjct: 210 VAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYTSLENVQYIHN------- 261

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
                                    +F +M  K+++SWN MI           A+ LF+ 
Sbjct: 262 -------------------------MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQ 296

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M +   +PD VT+A +LPAC  L+AL  GR +H YI +  +  +  + NA++DMY KCG 
Sbjct: 297 MEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGC 356

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  AR +FD +  +D++SWT M++ YG  G G DA+A F  M  +G  PD ++F+SVL A
Sbjct: 357 LEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSA 416

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSH+GL+D+G  +F MM  +  I P++EH+ACMVDL  R G + EAY FI+ MP+ P+  
Sbjct: 417 CSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNER 476

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           +WG+LL  CR+H ++ +    A+ +F+L P  +GYYVLL+N+YA+A  W++V  +R  + 
Sbjct: 477 VWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMK 536

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
           + G+KK PG S +E+ G+V+ F+AG   HP AK I   L  L  +MK  GY P+T  AL 
Sbjct: 537 KIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALH 596

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + +  +KE  L  HSEKLA+ F ILN   G  IR+TKNLRVCGDCH   K +SK   R I
Sbjct: 597 DVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNI 656

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           ++RD NRFHHF +G CSC  +W
Sbjct: 657 IVRDCNRFHHFSNGICSCGDYW 678



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 191/352 (54%), Gaps = 6/352 (1%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRR 153
           D  T+  +L+ C+ L +L  G +VH  I + G+  D  + +G+ LV M+  CG L+E R+
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL--DTNLFIGNALVAMYGKCGCLREARK 193

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           V +++    V  WN ++  Y+++G F ++L + K+M SL +  D+ T +  L  +    +
Sbjct: 194 VLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYTS 252

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
              V+  H +F+ ++ ++++SWN MI+ Y+ N +  + + +F +M   G   D  T+ ++
Sbjct: 253 LENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L  C +  AL  GR +H +  K      +   N LLDMY+KCG L+ A  VF+KM  R V
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDV 372

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSWTSM++ Y R G    A+ LF  M+  G  PD  A  S+L AC+  GLL+ G+     
Sbjct: 373 VSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRM 432

Query: 394 IKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           + E   +   +     ++D++ + G + +A S   QMP++ +   W  ++ A
Sbjct: 433 MTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 221/475 (46%), Gaps = 81/475 (17%)

Query: 91  KSKIDTKTYCS-ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           K ++ +K  C  IL     +K+L    K+HS I  +  +  D  L  KL+  +   G+  
Sbjct: 32  KVEVFSKEACEVILDQYPGIKTL---NKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETS 88

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
             R +F++     V  +N+++  Y     + E+L +F+ M S     D YTF CVLK  +
Sbjct: 89  VARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACS 148

Query: 210 VVGNSRR--------------------------------VKDAHKLFDELSDRDVVSWNC 237
            + N R                                 +++A K+ D++  RDVVSWN 
Sbjct: 149 GLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNS 208

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M++GY  +G  +  LE+ KEM +L  N D  TM ++                        
Sbjct: 209 MVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL------------------------ 244

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
                    + +  Y+   ++     +FE+M +++++SW  MIA Y    + + A+ LF 
Sbjct: 245 ---------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFL 295

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M   G++PD   I S+L AC     L +G+ +H YI++ +++ +L + NAL+DMYAKCG
Sbjct: 296 QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCG 355

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILP 466
            + +A  VF++M ++D+VSW +M+           A+ LF  ML + + PD +    +L 
Sbjct: 356 CLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLS 415

Query: 467 ACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           AC+    L++GR     +  ++GI         +VD++ + G +  A S    +P
Sbjct: 416 ACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMP 470



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 139/300 (46%), Gaps = 24/300 (8%)

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPD 457
           LM  Y+  G  + A  +F++   K++V +N MI           AL +F  ML   F PD
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
             T  C+L AC+ L  L  G ++H  I++ G+  +  + NA+V MY KCG L  AR + D
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            +P +D++SW  M+AGY   G   DA+    +M    +  D  +  S+     ++ L  E
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSL--E 254

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP---VAPDATIWGSLL 634
             ++ + M +E   +  L  +  M+ +       +EA      M    + PDA    SLL
Sbjct: 255 NVQYIHNM-FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN----VYAEAEKWEEVKKLREKISRR 690
             C     + L  ++ +++   E  N    +LL N    +YA+    EE + + +K+  R
Sbjct: 314 PACGDLSALFLGRRLHKYI---EKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLR 370



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 5/212 (2%)

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
           ++   +  D  +A  ++  Y   G   +AR +FD    K+++ + +MI  Y  +    +A
Sbjct: 62  VINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEA 121

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           ++ F  M      PD  +F  VL ACS    +  G +  + +  +  ++  L     +V 
Sbjct: 122 LSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI-VKVGLDTNLFIGNALVA 180

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD-NTG 662
           +  + G L EA + ++ MP   D   W S++ G     +   A ++ + +  L  + + G
Sbjct: 181 MYGKCGCLREARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAG 239

Query: 663 YYVLLANV--YAEAEKWEEVKKLREKISRRGL 692
               L+ V  Y   E  + +  + E+++++ L
Sbjct: 240 TMASLSPVVCYTSLENVQYIHNMFERMTKKNL 271


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 266/713 (37%), Positives = 406/713 (56%), Gaps = 51/713 (7%)

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           R+FN +       WN ++        F  +  LF+KM +  + + +   S  ++      
Sbjct: 70  RLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVR------ 123

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML---NLGFNVDLAT 269
             R ++ A  LFD++ +RDVVSWN M+SGY  NG  ++  E+F EM    ++ +N  LA 
Sbjct: 124 -YRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAA 182

Query: 270 MVT-------------------VLSGCANCGALMFGRAVHAFAL--KACFSKEISFNNTL 308
            V                    +   C   G +   R V A  +  +     E+S+N T+
Sbjct: 183 YVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWN-TM 241

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           +  Y++ G+L  A R+FE+   R V +WT+M++GY + G+ D A R+F GM     E + 
Sbjct: 242 ISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----EKNS 297

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
            +  +I+        ++  +++ + +   ++ S     N ++  YA+ G +A A + F++
Sbjct: 298 VSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSW----NTMITGYAQNGDIAQARNFFDR 353

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALERG 477
           MP +D +SW  +I           AL LFV M ++ E  +  T    L  CA +AALE G
Sbjct: 354 MPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELG 413

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           +++HG +++ G+ +   V NA++ MY KCG +  A  +F+ I  K+++SW  MIAGY  H
Sbjct: 414 KQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARH 473

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           GFG +A+  F  M++ GI PD+V+ + VL ACSH+GLVD+G  +F  M  +  I    +H
Sbjct: 474 GFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKH 533

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           Y CM+DLL R G L +A   ++ MP  PDA  WG+LL   RIH   +L EK A+ +FE+E
Sbjct: 534 YTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEME 593

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           PDN+G YVLL+N+YA + +W +V ++R ++  RG+KK PG SW+E++ K++ F  G S H
Sbjct: 594 PDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVH 653

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
           P   +I + L+ L L+MK+EGY   T+  L + +E EK   L  HSEKLA+AFGIL +PA
Sbjct: 654 PERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPA 713

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G+ IRV KNLRVC DCH   K +SK   R I+LRDS+RFHHF  G+CSC  +W
Sbjct: 714 GRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 222/448 (49%), Gaps = 39/448 (8%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           +V  G +++ RR+F    + ++  WN +M  Y K     ++  +F +M       D  ++
Sbjct: 183 YVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPE----RDEVSW 238

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
           + ++   A  G    + +A +LF+E   RDV +W  M+SGY+ NG+ ++   VF  M   
Sbjct: 239 NTMISGYAQNGE---LLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP-- 293

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               +  +   +++G   C  +   R +  F    C  + +S  NT++  Y++ GD+  A
Sbjct: 294 --EKNSVSWNAIIAGYVQCKRMDQAREL--FEAMPC--QNVSSWNTMITGYAQNGDIAQA 347

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
              F++M +R  +SW ++IAGYA+ G  + A+ LF  M R+G   +    TS L  CA  
Sbjct: 348 RNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEI 407

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             LE+GK VH  + +  ++S  YV NAL+ MY KCG++ DA  VF  +  K++VSWNTMI
Sbjct: 408 AALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMI 467

Query: 442 G----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGRE-IHGYILRHGI 489
                      AL LF +M +    PD VTM  +L AC+    +++G E  +     +GI
Sbjct: 468 AGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGI 527

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG---FGCDAIA 545
           +A+      ++D+  + G L  A++L   +P   D  +W  ++    +HG    G  A  
Sbjct: 528 TANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAK 587

Query: 546 TFNDMRQAGIEPDEVS---FISVLYACS 570
              +M     EPD       +S LYA S
Sbjct: 588 MIFEM-----EPDNSGMYVLLSNLYAAS 610



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 200/447 (44%), Gaps = 43/447 (9%)

Query: 55  ISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLE 113
           I   + CK   ++N  +  + + G +E A  +  S  K+  +  ++  ++        L 
Sbjct: 164 IFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES--KADWELISWNCMMGGYVKRNRLV 221

Query: 114 DGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
           D + +   + E      D V  + ++  +   G+L E +R+F +     VF W  ++  Y
Sbjct: 222 DARGIFDRMPER-----DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGY 276

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----------------------LAVV 211
            + G   E+  +F  M      + +   +  ++C                        + 
Sbjct: 277 VQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMIT 336

Query: 212 GNSRR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           G ++   +  A   FD +  RD +SW  +I+GY  +G  E+ L +F EM   G  ++ +T
Sbjct: 337 GYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRST 396

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
             + LS CA   AL  G+ VH   +KA         N LL MY KCG++D A  VFE + 
Sbjct: 397 FTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE 456

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           E+ VVSW +MIAGYAR G    A+ LF  M + GI PD   +  +L AC+  GL++ G +
Sbjct: 457 EKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTE 516

Query: 390 -VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLF 447
             +   ++  + ++      ++D+  + G + DA+++   MP + D  +W  ++GA  + 
Sbjct: 517 YFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIH 576

Query: 448 ---------VAMLQNFEPDGVTMACIL 465
                      M+   EPD   M  +L
Sbjct: 577 GNTELGEKAAKMIFEMEPDNSGMYVLL 603



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 181/408 (44%), Gaps = 46/408 (11%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N  +  + + G  D A+R+F  M  RS +SW +MI+G      F  A +LF  M      
Sbjct: 53  NIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTR--- 109

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
            D+ +   ++  C     L   + + D + E D+ S     NA++  YA+ G + +A+ +
Sbjct: 110 -DLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVS----WNAMLSGYAQNGYVKEAKEI 164

Query: 426 FNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYIL 485
           F++MP K+ +SWN M+ A       +QN   +      +  + A    +     + GY+ 
Sbjct: 165 FDEMPCKNSISWNGMLAAY------VQNGRIEDARR--LFESKADWELISWNCMMGGYVK 216

Query: 486 RHGISADRNV-----------ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           R+ +   R +            N ++  Y + G L+ A+ LF+  P +D+ +WT M++GY
Sbjct: 217 RNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGY 276

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
             +G   +A   F+ M     E + VS+ +++        +D+    F  M   C     
Sbjct: 277 VQNGMLDEARRVFDGM----PEKNSVSWNAIIAGYVQCKRMDQARELFEAM--PCQ---N 327

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
           +  +  M+   ++ G++++A  F + MP   D+  W +++ G   + +    E+      
Sbjct: 328 VSSWNTMITGYAQNGDIAQARNFFDRMP-QRDSISWAAIIAG---YAQSGYGEEALHLFV 383

Query: 655 ELEPD----NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
           E++ D    N   +    +  AE    E  K++  ++ + GL+   GC
Sbjct: 384 EMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLES--GC 429



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 129/317 (40%), Gaps = 68/317 (21%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           ++  +   GD+ + R  F+++       W  ++  Y+++G  +E+L+LF +M+  G   +
Sbjct: 334 MITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLN 393

Query: 198 SYTFSCVLKCLA------------------------VVGNS--------RRVKDAHKLFD 225
             TF+  L   A                         VGN+          + DA+ +F+
Sbjct: 394 RSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFE 453

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            + +++VVSWN MI+GY  +G  ++ L +F+ M   G   D  TMV VLS C++ G  + 
Sbjct: 454 GIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTG--LV 511

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
            +    F                   YS   D    I    K        +T MI    R
Sbjct: 512 DKGTEYF-------------------YSMTQDY--GITANSK-------HYTCMIDLLGR 543

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS-LY 404
            G  D A  L + M     EPD     ++L A    G  E+G+     I E +  +S +Y
Sbjct: 544 AGRLDDAQNLMKNMP---FEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMY 600

Query: 405 VSNALMDMYAKCGSMAD 421
           V   L ++YA  G   D
Sbjct: 601 V--LLSNLYAASGRWGD 615



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 21/279 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G  E+A+ +    ++   +++  T+ S L  CA++ +LE GK+VH  +
Sbjct: 361 SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV 420

Query: 123 CESGIVIDDG-VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            ++G+  + G  +G+ L+ M+  CG++ +   VF  I+  +V  WN ++  Y++ G  KE
Sbjct: 421 VKAGL--ESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKE 478

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS----WNC 237
           +L LF+ M+  GI  D  T   VL   +  G     K     +    D  + +    + C
Sbjct: 479 ALMLFESMKKTGILPDDVTMVGVLSACSHTGLVD--KGTEYFYSMTQDYGITANSKHYTC 536

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MI      G  +    + K   N+ F  D AT   +L      G    G      A K  
Sbjct: 537 MIDLLGRAGRLDDAQNLMK---NMPFEPDAATWGALLGASRIHGNTELGEK----AAKMI 589

Query: 298 FSKEISFNNT---LLDMYSKCGDLDGAIRVFEKMGERSV 333
           F  E   +     L ++Y+  G      R+  +M +R V
Sbjct: 590 FEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGV 628


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/687 (37%), Positives = 395/687 (57%), Gaps = 44/687 (6%)

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +M  +G+   +Y  S +++   +  +   +  A  +F  + + +++ WN M  G+  +  
Sbjct: 55  QMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSD 114

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
               L+++  M++LG   +  T   VL  CA   A   G+ +H   LK     ++  + +
Sbjct: 115 PVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 174

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTS----------------------------- 338
           L+ MY + G L+ A +VF+K   R VVS+T+                             
Sbjct: 175 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 234

Query: 339 --MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
             MI+GYA  G +  A+ LF+ M++  + PD   + +++ ACA  G +E+G+ VH +I +
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           +   S+L + NAL+D+Y+KCG +  A  +F ++P KD++SWNT+IG          AL L
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354

Query: 447 FVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRH--GISADRNVANAIVDMY 503
           F  ML++ E P+ VTM  ILPACA L A++ GR IH YI +   G++   ++  +++DMY
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +  A  +F+ I  K L SW  MI G+ MHG    +   F+ MR+ GI+PD+++F+
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFV 474

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L ACSHSG++D G   F  M  +  + PKLEHY CM+DLL  +G   EA   I MM +
Sbjct: 475 GLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEM 534

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            PD  IW SLL  C++H  V+L E  AE++ ++EP+N G YVLL+N+YA A +W EV K 
Sbjct: 535 EPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKT 594

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R  ++ +G+KK PGCS IEI   V+ F+ G   HP  ++I  +L+ + + +++ G+ P T
Sbjct: 595 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDT 654

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              L   +E  KE AL  HSEKLA+AFG+++   G  + + KNLRVC +CHE  K +SK 
Sbjct: 655 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 714

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +REI+ RD  RFHHF+DG CSC  +W
Sbjct: 715 YKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 209/399 (52%), Gaps = 52/399 (13%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T+  +L+ CA  K+ ++G+++H  + + G  +D  V  S L+ M+V  G L++  +V
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS-LISMYVQNGRLEDAHKV 191

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+K  +  V  +  L+  Y+  G                                     
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRG------------------------------------- 214

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             +++A KLFDE+  +DVVSWN MISGY   G  ++ LE+FK+M+      D +TMVTV+
Sbjct: 215 -YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S CA  G++  GR VH +     F   +   N L+D+YSKCG+L+ A  +FE++  + V+
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW ++I GY    ++  A+ LF+ M+R G  P+   + SIL ACA  G ++IG+ +H YI
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393

Query: 395 KE--NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------G 442
            +    + ++  +  +L+DMYAKCG +  A  VFN +  K + SWN MI           
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453

Query: 443 ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           + DLF  M +   +PD +T   +L AC+    L+ GR I
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 49/267 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + E GN ++A+E+     K+ +  D  T  +++  CA   S+E G++VH   
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH--- 289

Query: 123 CESGIVIDDGVLGSK------LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
               + IDD   GS       L+ ++  CG+L+    +F ++    V  WN L+  Y+  
Sbjct: 290 ----LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----------SRRVKD------ 219
             +KE+L LF++M   G   +  T   +L   A +G             +R+K       
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405

Query: 220 -----------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                            AH++F+ +  + + SWN MI G+  +G A+   ++F  M  +G
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAV 289
              D  T V +LS C++ G L  GR +
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHI 492


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/570 (41%), Positives = 346/570 (60%), Gaps = 12/570 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++L  C    A+  G+ +HA    A F  +      L+++Y  C  L  A  +F+++ + 
Sbjct: 80  SLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKH 139

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           ++  W  +I GYA  G ++ A++L+  M   G+ PD +    +L ACA    +E G+++H
Sbjct: 140 NIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIH 199

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------- 443
           +++ +   +  ++V  AL+DMYAKCG +  A  VF+++ V+D V WN+M+ A        
Sbjct: 200 EHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPD 259

Query: 444 --LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             L L   M L    P   T+   + A A  AAL +GRE+HG   R    +   V  A+V
Sbjct: 260 ACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALV 319

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY KCG + +AR+LF+ +  K ++SW  MI GY MHG   +A+  F +M +   +PD +
Sbjct: 320 DMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHI 378

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+ VL ACSH GL++EGW FF  M  +  I+P ++HY CMVDLL  +G L EAY  I  
Sbjct: 379 TFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQ 438

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           M V PD+ +WG+LL  C+IH  V+L E   E + ELEPD+ G YV+L+N+YA+A KWE V
Sbjct: 439 MKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGV 498

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            KLR+ ++ R LKK+  CSWIE+K KV+ F++G +SHP + +I S L+R+   MK  GY 
Sbjct: 499 AKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYS 558

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T     + ++ EK   +C HSE+LA+AFG+++ P G  + +TKNLR+C DCH   KF+
Sbjct: 559 PSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFI 618

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK   REI +RD NR+HHFKDG CSC  +W
Sbjct: 619 SKITEREITVRDVNRYHHFKDGVCSCGDYW 648



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 189/379 (49%), Gaps = 36/379 (9%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y S+LQ C   K+++ GK++H+ +C +G   D  V+ +KLV ++  C  L   R +F++I
Sbjct: 78  YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDT-VIATKLVNLYCVCDSLSSARLLFDRI 136

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSR 215
               +F+WN+L+  Y+  G ++ ++ L+ +M   G+  D++TF  VLK    L+ + + R
Sbjct: 137 PKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGR 196

Query: 216 RVKD-----------------------------AHKLFDELSDRDVVSWNCMISGYIANG 246
            + +                             A ++FD++  RD V WN M++ Y  NG
Sbjct: 197 EIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNG 256

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
             +  L +  EM+  G     AT+VT +S  A+  AL  GR +H  + +  F        
Sbjct: 257 HPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKT 316

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L+DMY+KCG +  A  +FE++G + VVSW +MI GYA  G    A+ LF  M R   +P
Sbjct: 317 ALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KP 375

Query: 367 DVYAITSILHACACDGLLEIGKDVHD-YIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           D      +L AC+  GLLE G    +  I++  +  ++     ++D+    G + +A ++
Sbjct: 376 DHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNL 435

Query: 426 FNQMPV-KDIVSWNTMIGA 443
             QM V  D   W  ++ +
Sbjct: 436 IMQMKVLPDSGVWGALLNS 454



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 141/271 (52%), Gaps = 10/271 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           +  A  LFD +   ++  WN +I GY  NG  E  ++++ +M + G   D  T   VL  
Sbjct: 126 LSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKA 185

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA   A+  GR +H   ++  + K++     L+DMY+KCG +  A  VF+K+  R  V W
Sbjct: 186 CAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLW 245

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            SM+A Y++ G  D  + L   MV  G+ P    + + + A A +  L  G+++H     
Sbjct: 246 NSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWR 305

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
            + +S   V  AL+DMYAKCGS+  A ++F ++ VK +VSWN MI           ALDL
Sbjct: 306 QEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDL 365

Query: 447 FVAMLQNFEPDGVTMACILPACASLAALERG 477
           F  M +  +PD +T   +L AC+    LE G
Sbjct: 366 FEEMNRVAKPDHITFVGVLSACSHGGLLEEG 396



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 153/317 (48%), Gaps = 14/317 (4%)

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           + P      S+L +C     ++ GK +H  +          ++  L+++Y  C S++ A 
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLA 472
            +F+++P  +I  WN +I           A+ L+  M      PD  T   +L ACA+L+
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           A+E GREIH ++++ G   D  V  A++DMY KCG +  AR +FD I  +D + W  M+A
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLA 250

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
            Y  +G     ++  ++M   G+ P E + ++ + A + +  + +G R  + + +    E
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQG-RELHGLSWRQEFE 309

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
              +    +VD+ ++ G++  A    E + V      W +++ G  +H     A  + E 
Sbjct: 310 SHDKVKTALVDMYAKCGSVRVARNLFERLGVK-RVVSWNAMITGYAMHGHATEALDLFEE 368

Query: 653 VFEL-EPDNTGYYVLLA 668
           +  + +PD+  +  +L+
Sbjct: 369 MNRVAKPDHITFVGVLS 385



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 37/298 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  I  +   G  E A+++ Y      +  D  T+  +L+ CA L ++E G+++H  + 
Sbjct: 144 WNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVV 203

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           ++G    D  +G+ L+ M+  CG +   R VF+KI      +WN ++  YS+ G+    L
Sbjct: 204 QTGWE-KDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACL 262

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLA----------VVGNSRR----------------- 216
            L  +M   G+     T    +   A          + G S R                 
Sbjct: 263 SLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMY 322

Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                V+ A  LF+ L  + VVSWN MI+GY  +G A + L++F+EM N     D  T V
Sbjct: 323 AKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKPDHITFV 381

Query: 272 TVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            VLS C++ G L  G       ++       +     ++D+    G LD A  +  +M
Sbjct: 382 GVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQM 439


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/782 (33%), Positives = 419/782 (53%), Gaps = 45/782 (5%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K DT  + ++LQ C+  K+++ G++VH  +C+ G   ++ V G  L+ M+  CG + E +
Sbjct: 2   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCG-HLIQMYAQCGSVPEAQ 60

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--- 209
           +VF  ++   VF W  ++  Y + G++  +L +F +MQ   +     T+  +L   A   
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 210 ---------------------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMIS 240
                                 VG +          V+ A   F  L  RDVVSW  MI+
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
             + +        +++ M   G   +  T+ TV +   +   L  G+ +++         
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMES 240

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++   N+ ++M+   G L  A R+FE M +R VV+W  +I  Y +   F  A+RLF  + 
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQ 300

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           ++GI+ +      +L+       L  GK +H+ +KE      + V+ ALM +Y +C +  
Sbjct: 301 QDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPG 360

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACA 469
            A  +F  M  KD+++W  M            AL LF  M L+   P   T+  +L  CA
Sbjct: 361 QAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCA 420

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            LAAL++GR+IH +I+ +G   +  V  A+++MY KCG +  ARS+F+ +  +D++ W  
Sbjct: 421 HLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNS 480

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           M+  Y  HG+  + +  FN M+  G + D VSF+SVL A SHSG V +G+++F  M  + 
Sbjct: 481 MLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDF 540

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFI-EMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
           +I P  E Y C+VDLL R G + EA   + ++    PD  +W +LL  CR H++   A+ 
Sbjct: 541 SITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKA 600

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            AE V E +P ++G YV+L+NVYA A  W+ V ++R+ +  RG+KK PG S IEI  +V+
Sbjct: 601 AAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVH 660

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            F+ G  SHP    I + L  L  EM+  GY P T+  L + ++  KE  L  HSE+LA+
Sbjct: 661 EFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAI 720

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           AFG+++ P G  +RV KNLRVC DCH   K++SK   REI++RD++RFH+FKDGRCSC+ 
Sbjct: 721 AFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKD 780

Query: 829 FW 830
           +W
Sbjct: 781 YW 782



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 11/315 (3%)

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
           F  D A  V +L  C++   +  GR VH       F +       L+ MY++CG +  A 
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
           +VFE +  + V +WT MI  Y ++G +D A+ +F  M  E + P      +IL+ACA   
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
            L+ G ++H  I +   +  ++V  AL++MY KCGS+  A   F ++  +D+VSW  MI 
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180

Query: 443 AL---DLFV--------AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
           A    D F           L    P+ +T+  +  A      L  G+ I+  +    + +
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMES 240

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D  V N+ ++M+   G+L  AR LF+ +  +D+++W I+I  Y  +    +A+  F  ++
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQ 300

Query: 552 QAGIEPDEVSFISVL 566
           Q GI+ ++++F+ +L
Sbjct: 301 QDGIKANDITFVLML 315



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 116/245 (47%), Gaps = 7/245 (2%)

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
           F+PD      +L  C+S   ++ GR +H ++   G   +  V   ++ MY +CG +  A+
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
            +F+++  KD+ +WT MI  Y   G    A+  F  M++  + P +V+++++L AC+ + 
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
            + +G      +  +   E  +     ++++ ++ G++  A+   + +    D   W ++
Sbjct: 121 SLKDGMEIHGQI-LQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAM 178

Query: 634 LCGCRIHHEVKLAEKVAEHVFELE---PDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
           +  C  H +  LA  +   + +L+   P+    Y +  N Y +     E K +   +S R
Sbjct: 179 IAACVQHDQFALARWLYRRM-QLDGVVPNKITLYTVF-NAYGDPHYLSEGKFIYSLVSSR 236

Query: 691 GLKKN 695
            ++ +
Sbjct: 237 VMESD 241


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/633 (37%), Positives = 373/633 (58%), Gaps = 35/633 (5%)

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           ++W C+I  Y ++G+    L  F  + + G + D     ++L            +++HA 
Sbjct: 42  LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101

Query: 293 ALKACFSKEISFNNTLLDMYSKCG----------------------DLDGAIRVFEKMGE 330
            ++  F  ++   N L++MYSK                         +D   ++F++M  
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R VVSW ++IAG A+ G+++ A+ + + M +E + PD + ++SIL        +  GK++
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA------- 443
           H Y   +     +++ ++L+DMYAKC  +  +   F+ +  +D +SWN++I         
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRF 281

Query: 444 ---LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
              L  F  ML +  +P  V+ + ++PACA L AL  G+++H YI+R G   ++ +A+++
Sbjct: 282 DQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSL 341

Query: 500 VDMYVKCGVLVLARSLFDMIPA--KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           +DMY KCG + +AR +F+ I    +D++SWT +I G  MHG   DA++ F +M   G++P
Sbjct: 342 LDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKP 401

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
             V+F++VL ACSH+GLVDEGW++FN M+ +  + P LEHYA + DLL R G L EAY F
Sbjct: 402 CYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDF 461

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           I  M   P  ++W +LL  CR H  ++LAEKV   +  ++P N G +V+++N+Y+ A++W
Sbjct: 462 ISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRW 521

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
            +  KLR ++ + GLKK P CSWIE+  KV+ F+AG  SHP+  KI   L  L  +M++E
Sbjct: 522 RDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKE 581

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           GY   T   L + DE  K   L  HSE+LA+AFGI++  +G TIRV KN+RVC DCH   
Sbjct: 582 GYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAI 641

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KFM+K   REI++RD++RFHHFK+G CSC  +W
Sbjct: 642 KFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 165/310 (53%), Gaps = 14/310 (4%)

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
           S ++    KLFD +  RDVVSWN +I+G   NG+ E+ L + KEM       D  T+ ++
Sbjct: 146 SVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSI 205

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L        +  G+ +H +A++  F K++   ++L+DMY+KC  ++ ++  F  +  R  
Sbjct: 206 LPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDA 265

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           +SW S+IAG  + G FD  +  FR M++E ++P   + +S++ ACA    L +GK +H Y
Sbjct: 266 ISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAY 325

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV--KDIVSWNTMI---------- 441
           I       + +++++L+DMYAKCG++  A  +FN++ +  +D+VSW  +I          
Sbjct: 326 IIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHAL 385

Query: 442 GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAI 499
            A+ LF  ML    +P  V    +L AC+    ++ G +    + R  G++       A+
Sbjct: 386 DAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAV 445

Query: 500 VDMYVKCGVL 509
            D+  + G L
Sbjct: 446 ADLLGRAGRL 455



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 159/328 (48%), Gaps = 36/328 (10%)

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
           R++F+++    V  WN ++   ++ G ++E+L + K+M    +  DS+T S +L      
Sbjct: 153 RKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEH 212

Query: 212 GNSRRVKDAHKL--------------------------------FDELSDRDVVSWNCMI 239
            N  + K+ H                                  F  LS+RD +SWN +I
Sbjct: 213 ANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSII 272

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           +G + NG  ++GL  F+ ML         +  +V+  CA+  AL  G+ +HA+ ++  F 
Sbjct: 273 AGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFD 332

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEK--MGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
                 ++LLDMY+KCG++  A  +F K  M +R +VSWT++I G A  G    A+ LF 
Sbjct: 333 DNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFE 392

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKC 416
            M+ +G++P   A  ++L AC+  GL++ G K  +   ++  +   L    A+ D+  + 
Sbjct: 393 EMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRA 452

Query: 417 GSMADAESVFNQMPVKDIVS-WNTMIGA 443
           G + +A    + M  +   S W+T++ A
Sbjct: 453 GRLEEAYDFISNMGEEPTGSVWSTLLAA 480



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 128/315 (40%), Gaps = 47/315 (14%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           NA+ G + E  N+ K M      E  + D+ T  SIL +  +  ++  GK++H      G
Sbjct: 174 NAQNGMYEEALNMVKEM----GKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHG 229

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
               D  +GS L+ M+  C  ++     F+ + N     WN ++    + G F + L  F
Sbjct: 230 F-DKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFF 288

Query: 187 KKMQS-----------------------------------LGIAADSYTFSCVLKCLAVV 211
           ++M                                     LG   + +  S +L   A  
Sbjct: 289 RRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKC 348

Query: 212 GNSRRVKDAHKLFD--ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           GN   +K A  +F+  E+ DRD+VSW  +I G   +G A   + +F+EML  G       
Sbjct: 349 GN---IKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVA 405

Query: 270 MVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            + VL+ C++ G +  G +  ++       +  +     + D+  + G L+ A      M
Sbjct: 406 FMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNM 465

Query: 329 GERSVVS-WTSMIAG 342
           GE    S W++++A 
Sbjct: 466 GEEPTGSVWSTLLAA 480


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/744 (35%), Positives = 398/744 (53%), Gaps = 92/744 (12%)

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
           DD  + + LV MFV CG +    R+F +I    +F  N ++  Y KT     +L      
Sbjct: 171 DDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHAL------ 224

Query: 190 QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                           +LFD + +RDVVSWN M+S    +G   
Sbjct: 225 --------------------------------ELFDSMPERDVVSWNMMVSALSQSGRVR 252

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L++  +M + G  +D  T  + L+ CA   +L +G+ +HA  ++     +    + L+
Sbjct: 253 EALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALV 312

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           ++Y+K G    A  VF  + +R+ V+WT +I+G+ + G F  ++ LF  M  E +  D +
Sbjct: 313 ELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQF 372

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           A+ +++  C     L +G+ +H    ++    ++ VSN+L+ MYAKC ++  AE++F  M
Sbjct: 373 ALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFM 432

Query: 430 PVKDIVSWNTMIGA-----------------------------------------LDLFV 448
             KDIVSW +MI A                                         L ++ 
Sbjct: 433 NEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYK 492

Query: 449 AML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
            ML  +   PD VT   +   CA L A + G +I G  ++ G+  D +VANA++ MY KC
Sbjct: 493 VMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKC 552

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G ++ AR +FD +  KD++SW  MI GY  HG G  AI  F+D+ + G +PD +S+++VL
Sbjct: 553 GRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVL 612

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
             CSHSGLV EG  +F+MM+   NI P LEH++CMVDLL R G+L+EA   I+ MP+ P 
Sbjct: 613 SGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPT 672

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
           A +WG+LL  C+IH   +LAE  A+HVFEL+  ++G Y+L+A +YA+A K ++  ++R+ 
Sbjct: 673 AEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKL 732

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +  +G+KKNPG SW+E+  KV++F A   SHP    I   L  L  ++ R GY       
Sbjct: 733 MRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGY------- 785

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
            +  D    E+    HSEKLA+AFG++ LP    I + KNLR+CGDCH + K +S    R
Sbjct: 786 -VRTDSTRSEIH---HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGR 841

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           E V+RD+ RFHHF  G CSC  +W
Sbjct: 842 EFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 211/447 (47%), Gaps = 69/447 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +    + G + +A++++    S+  ++D+ TY S L  CA L SL  GK++H+ +
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 296

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +   ID  V  S LV ++   G  KE + VFN + +     W +L+  + + G F ES
Sbjct: 297 IRNLPHIDPYV-ASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTES 355

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK--------CLA----------------VVGNS---- 214
           + LF +M++  +  D +  + ++         CL                 VV NS    
Sbjct: 356 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 415

Query: 215 ----RRVKDAHKLFDELSDRDVVS-------------------------------WNCMI 239
                 ++ A  +F  ++++D+VS                               WN M+
Sbjct: 416 YAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAML 475

Query: 240 SGYIANGVAEKGLEVFKEMLNLGF-NVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
             YI +G  E GL ++K ML+  +   D  T VT+  GCA+ GA   G  +    +K   
Sbjct: 476 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 535

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             + S  N ++ MYSKCG +  A +VF+ +  + +VSW +MI GY++ G+   AI +F  
Sbjct: 536 IIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 595

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCG 417
           +++ G +PD  +  ++L  C+  GL++ GK   D +K  +++   L   + ++D+  + G
Sbjct: 596 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAG 655

Query: 418 SMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +A+ + + MP+K     W  ++ A
Sbjct: 656 HLTEAKDLIDDMPMKPTAEVWGALLSA 682



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 149/593 (25%), Positives = 254/593 (42%), Gaps = 105/593 (17%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA-ADSYTFSCVLKCLAVVGNSRRVKDAH 221
           VF+ N L+H Y   G   ++    +++  + IA  +  T + +L   A +G   R+ DA 
Sbjct: 39  VFLQNTLLHAYLSCGALSDA----RRLLLMDIAHPNVITHNVMLNGYAKLG---RLSDAV 91

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           +LF  +  RDV SWN ++SGY  +      LE F  M   G +       T+     +CG
Sbjct: 92  ELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS--WPNAFTLACAMKSCG 149

Query: 282 ALMFGRAVHAFALK--ACFSKEISFNNT-----LLDMYSKCG------------------ 316
           AL +    H+ AL+  A   K  S +++     L+DM+ +CG                  
Sbjct: 150 ALGW----HSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMF 205

Query: 317 -------------DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
                         +D A+ +F+ M ER VVSW  M++  ++ G    A+ +   M  +G
Sbjct: 206 CRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 265

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           +  D    TS L ACA    L  GK +H  +  N      YV++AL+++YAK G   +A+
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAK 325

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLA 472
            VFN +  ++ V+W  +I           +++LF  M       D   +A ++  C S  
Sbjct: 326 GVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRM 385

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
            L  GR++H   L+ G      V+N+++ MY KC  L  A ++F  +  KD++SWT MI 
Sbjct: 386 DLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT 445

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
            Y   G    A   F+ M     E + +++ ++L A    G  ++G R + +M  E  + 
Sbjct: 446 AYSQVGNVAKAREFFDGMS----EKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 501

Query: 593 PKLEHYACM-----------------------------------VDLLSRTGNLSEAYRF 617
           P    Y  +                                   + + S+ G + EA + 
Sbjct: 502 PDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKV 561

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
            + + V  D   W +++ G   H   K A ++ + + +   +PD   Y  +L+
Sbjct: 562 FDFLNV-KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 139/300 (46%), Gaps = 49/300 (16%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           +V  G+   V+   ++LHA    G L    D    +  +    ++   N +++ YAK G 
Sbjct: 30  LVAVGLASAVFLQNTLLHAYLSCGALS---DARRLLLMDIAHPNVITHNVMLNGYAKLGR 86

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE--PDGVTMACILP 466
           ++DA  +F +MP +D+ SWNT++           +L+ F++M ++ +  P+  T+AC + 
Sbjct: 87  LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 146

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR------------- 513
           +C +L       ++   + +     D  VA A+VDM+V+CG + LA              
Sbjct: 147 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 206

Query: 514 ------------------SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
                              LFD +P +D++SW +M++     G   +A+    DM+  G+
Sbjct: 207 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
             D  ++ S L AC+    +  G +    ++R   +I+P +   + +V+L +++G   EA
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA--SALVELYAKSGCFKEA 324


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 266/735 (36%), Positives = 398/735 (54%), Gaps = 48/735 (6%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           +V  G+L E R++F+ +       W +L+  YS+   FKE+  LF +MQ  G   D  TF
Sbjct: 93  YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 152

Query: 202 SCVLK------------------------CLAVVGN--------SRRVKDAHKLFDELSD 229
             +L                            +VGN        S R+  A +LF E+ +
Sbjct: 153 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE 212

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA--LMFGR 287
            D VS+N MI+GY  +G+ EK + +F EM N G      T   VL  CAN G   ++ G+
Sbjct: 213 IDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQ 270

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            +H+F +K  F   +  +N LLD YSK   +  A ++F++M E+  VS+  +I+GYA +G
Sbjct: 271 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDG 330

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
               A  LFR +     +   +   ++L   +     E+G+ +H         S + V N
Sbjct: 331 KHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGN 390

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQ-NFEP 456
           +L+DMYAKCG   +AE +F  +  +  V W  MI A          L LF  M Q +   
Sbjct: 391 SLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIA 450

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           D  T A +L A AS+A+L  G+++H +I++ G  ++    +A++D+Y KCG +  A   F
Sbjct: 451 DQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTF 510

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
             +P ++++SW  MI+ Y  +G     + +F +M  +G++PD VSF+ VL ACSHSGLV+
Sbjct: 511 QEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVE 570

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           EG   FN M     ++P+ EHYA +VD+L R+G  +EA + +  MP+ PD  +W S+L  
Sbjct: 571 EGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 630

Query: 637 CRIHHEVKLAEKVAEHVFELEP-DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
           CRIH   +LA + A+ +F +E   +   YV ++N+YA A +WE V K+ + +  RG+KK 
Sbjct: 631 CRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKL 690

Query: 696 PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEK 755
           P  SW+EIK + ++F A    HP  ++I   +  L   M+  GY P T  AL N DE  K
Sbjct: 691 PAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFK 750

Query: 756 EVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNR 815
             +L  HSE+LA+AF +++ P G  I V KNLR C DCH   K +SK   REI +RDS R
Sbjct: 751 VESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTR 810

Query: 816 FHHFKDGRCSCRGFW 830
           FHHF+DG CSC  FW
Sbjct: 811 FHHFRDGFCSCGDFW 825



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 255/519 (49%), Gaps = 30/519 (5%)

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE 226
           N  +  + K G   ++  LF+KM      + +   S  +K     GN   + +A KLFD 
Sbjct: 56  NFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKS----GN---LGEARKLFDG 108

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           + +R  V+W  +I GY      ++  E+F +M   G   D  T VT+LSGC         
Sbjct: 109 MVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQI 168

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
             V    +K  +   +   NTL+D Y K   LD A ++F++M E   VS+ +MI GY+++
Sbjct: 169 TQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKD 228

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI--GKDVHDYIKENDMQSSLY 404
           G+ + A+ LF  M   G++P  +   ++L  CA  GL +I  G+ +H ++ + +   +++
Sbjct: 229 GLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQQIHSFVIKTNFVWNVF 286

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQN 453
           VSNAL+D Y+K  S+ DA  +F++MP +D VS+N +I           A DLF  +    
Sbjct: 287 VSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTA 346

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
           F+      A +L   ++    E GR+IH   +     ++  V N++VDMY KCG    A 
Sbjct: 347 FDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAE 406

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
            +F  +  +  + WT MI+ Y   GF  + +  FN MRQA +  D+ +F S+L A +   
Sbjct: 407 MIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIA 466

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI--WG 631
            +  G +  + +  +      +   + ++D+ ++ G++ +A +  + M   PD  I  W 
Sbjct: 467 SLSLGKQLHSFI-IKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEM---PDRNIVSWN 522

Query: 632 SLLCGCRIHHEVKLAEK-VAEHVFE-LEPDNTGYYVLLA 668
           +++     + E +   K   E V   L+PD+  +  +L+
Sbjct: 523 AMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLS 561



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 209/418 (50%), Gaps = 43/418 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLED---GKKVHSI 121
           +YNA I  + + G  EKA+ +    + S +    +     LCA++  L+D   G+++HS 
Sbjct: 217 SYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANI-GLDDIVLGQQIHSF 275

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           + ++  V +  V  + L F +     + + R++F+++       +N+++  Y+  G  K 
Sbjct: 276 VIKTNFVWNVFVSNALLDF-YSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKY 334

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR-- 215
           +  LF+++Q        + F+ +L   +                        +VGNS   
Sbjct: 335 AFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVD 394

Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                 + ++A  +F  L+ R  V W  MIS Y+  G  E+GL++F +M       D AT
Sbjct: 395 MYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQAT 454

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
             ++L   A+  +L  G+ +H+F +K+ F   +   + LLD+Y+KCG +  A++ F++M 
Sbjct: 455 FASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP 514

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK- 388
           +R++VSW +MI+ YA+ G  +  ++ F+ MV  G++PD  +   +L AC+  GL+E G  
Sbjct: 515 DRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLW 574

Query: 389 --DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
             +    I + D +   Y S  ++DM  + G   +AE +  +MP+  D + W++++ A
Sbjct: 575 HFNSMTQIYKLDPRREHYAS--VVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 630



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 147/327 (44%), Gaps = 44/327 (13%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE------------------ 330
           + A  +K  F  + S +N  +  + K G+L  A ++FEKM                    
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 331 -------------RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
                        R+ V+WT +I GY++   F  A  LF  M R G EPD     ++L  
Sbjct: 99  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           C    +      V   I +    S L V N L+D Y K   +  A  +F +MP  D VS+
Sbjct: 159 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSY 218

Query: 438 NTMIG----------ALDLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYIL 485
           N MI           A++LFV M QN   +P   T A +L A   L  +  G++IH +++
Sbjct: 219 NAMITGYSKDGLDEKAVNLFVEM-QNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVI 277

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
           +     +  V+NA++D Y K   ++ AR LFD +P +D +S+ ++I+GY   G    A  
Sbjct: 278 KTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFD 337

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHS 572
            F +++    +  +  F ++L   S++
Sbjct: 338 LFRELQFTAFDRKQFPFATMLSIASNT 364



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 170/403 (42%), Gaps = 76/403 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSII 122
           +YN  I  +   G  + A ++    + +  D K +   ++L + ++    E G+++H+  
Sbjct: 318 SYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHA-- 375

Query: 123 CESGIVIDDG--VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            ++ +   D   ++G+ LV M+  CG  +E   +F  + +     W  ++  Y + G ++
Sbjct: 376 -QTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYE 434

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKC--------------------------------L 208
           E L LF KM+   + AD  TF+ +L+                                 L
Sbjct: 435 EGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALL 494

Query: 209 AVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
            V      +KDA + F E+ DR++VSWN MIS Y  NG AE  L+ FKEM+  G   D  
Sbjct: 495 DVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSV 554

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           + + VLS C++ G +  G               +   N++  +Y              K+
Sbjct: 555 SFLGVLSACSHSGLVEEG---------------LWHFNSMTQIY--------------KL 585

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             R    + S++    R G F+ A +L   M    I+PD    +S+L+AC      E+ +
Sbjct: 586 DPRR-EHYASVVDMLCRSGRFNEAEKL---MAEMPIDPDEIMWSSVLNACRIHKNQELAR 641

Query: 389 DVHDYI--KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
              D +   E    ++ YV+  + ++YA  G   +   V   M
Sbjct: 642 RAADQLFNMEELRDAAPYVN--MSNIYAAAGQWENVSKVHKAM 682



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 17/229 (7%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           +V+ G +PD       +     +G L   + + + +   +  S+    N ++  Y K G+
Sbjct: 43  IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVST----NMMISGYVKSGN 98

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPA 467
           + +A  +F+ M  +  V+W  +IG          A +LFV M +   EPD VT   +L  
Sbjct: 99  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C       +  ++   I++ G  +   V N +VD Y K   L LA  LF  +P  D +S+
Sbjct: 159 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSY 218

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
             MI GY   G    A+  F +M+ +G++P E +F +VL  C++ GL D
Sbjct: 219 NAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDD 265


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 268/722 (37%), Positives = 406/722 (56%), Gaps = 48/722 (6%)

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+ ++N  +F  + ++    K  + K+   +  +M   G+  D ++ S +    A+   S
Sbjct: 14  FSTLNNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFS 73

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTV 273
             +  A  LFD++   ++ +WN +I  Y ++    +   +F ++L+   ++ +  T   V
Sbjct: 74  T-LDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFV 132

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           +   +   A   G AVH  A+K  F  ++   N+L+  Y  CGDL  A R+F+ +  + V
Sbjct: 133 IKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDV 192

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSW SMI+ +A+    + A+ LF  M RE + P+   +  +L ACA    LE G+ V  Y
Sbjct: 193 VSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSY 252

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAES----------------------------- 424
           I+   ++  L + NA++DMY KCGS+ DA+                              
Sbjct: 253 IERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAA 312

Query: 425 --VFNQMPVKDIVSWNTMIGA----------LDLF--VAMLQNFEPDGVTMACILPACAS 470
             VFN MPVK+I +WN +I A          L +F  + + +  +PD VT+   L ACA 
Sbjct: 313 RLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQ 372

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           L A++ G  IH YI R GI  + ++ +++VDMY KCG L  A  +F  +  +D+  W+ M
Sbjct: 373 LGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAM 432

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           IAG GMHG G  AI  F +M++A ++P+ V+F +VL ACSH+GLVDEG  FF+ M     
Sbjct: 433 IAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYG 492

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           + P+++HYACMVD+L R G L EA   I  M   P A++WG+LL  C +H  V+L E  +
Sbjct: 493 VVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELAS 552

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
           + + +LEP N G  VLL+N+YA+  +WE+V +LR+ +    LKK PGCS IE  G V+ F
Sbjct: 553 DQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEF 612

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY--ALINADEMEKEVALCGHSEKLAM 768
           + G ++HP +  I S L+ +  ++K  GY P   +   LI  D++ KE AL  HSEKLA+
Sbjct: 613 LVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDL-KEQALSLHSEKLAI 671

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           AFG++ L   Q IRV KNLR+CGDCH  AK +S+   R+I+LRD  RFHHF+DG CSC  
Sbjct: 672 AFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMD 731

Query: 829 FW 830
           +W
Sbjct: 732 YW 733



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 192/411 (46%), Gaps = 47/411 (11%)

Query: 43  HSSCTINPISASISKTLVCK-TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTY 99
           + +C    ++  + K + CK   ++N+ I  F +    E A+E+    E+  +  ++ T 
Sbjct: 171 YGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTM 230

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
             +L  CA    LE G+ V S I   GI +D   L + ++ M+  CG + + +++F+++ 
Sbjct: 231 VGVLSACAKKLDLEFGRWVCSYIERKGIKVD-LTLCNAMLDMYTKCGSVDDAQKLFDEMP 289

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
              VF W +++  Y+K G++                                       D
Sbjct: 290 ERDVFSWTIMLDGYAKMGDY---------------------------------------D 310

Query: 220 AHKL-FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGC 277
           A +L F+ +  +++ +WN +IS Y  NG  ++ L +F E+ L+     D  T+V+ LS C
Sbjct: 311 AARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSAC 370

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A  GA+  G  +H +  +          ++L+DMY+KCG L+ A+ VF  + ER V  W+
Sbjct: 371 AQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWS 430

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD-VHDYIKE 396
           +MIAG    G    AI LF  M    ++P+    T++L AC+  GL++ G+   H+    
Sbjct: 431 AMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPV 490

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALDL 446
             +   +     ++D+  + G + +A  + N+M      S W  ++GA  L
Sbjct: 491 YGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSL 541


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/706 (34%), Positives = 379/706 (53%), Gaps = 81/706 (11%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K +A   N     DA  +   + D  + S++ +I       +  + + VF  M + G   
Sbjct: 55  KLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIP 114

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D   +  +   CA   A   G+ +H  +  +    +     ++  MY +CG +  A +VF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE-------------------- 365
           ++M ++ VV+ ++++  YAR+G  +  +R+   M   GIE                    
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234

Query: 366 ---------------PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
                          PD   ++S+L +     +L +G+ +H Y+ +  +     V +A++
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294

Query: 411 DMYAKCGSMADAESVFNQMPVKD-----------------------------------IV 435
           DMY K G +    S+FNQ  + +                                   +V
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354

Query: 436 SWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYI 484
           SW ++I           AL+LF  M +   +P+ VT+  +LPAC ++AAL  GR  HG+ 
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
           +R  +  + +V +A++DMY KCG + L++ +F+M+P K+L+ W  ++ G+ MHG   + +
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVM 474

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
           + F  + +  ++PD +SF S+L AC   GL DEGW++F MM  E  I+P+LEHY+CMV+L
Sbjct: 475 SIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
           L R G L EAY  I+ MP  PD+ +WG+LL  CR+ + V LAE  AE +F LEP+N G Y
Sbjct: 535 LGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTY 594

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
           VLL+N+YA    W EV  +R K+   GLKKNPGCSWI++K +V   +AG  SHP   +I 
Sbjct: 595 VLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQIT 654

Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVT 784
             +  +  EM++ G+ P   +AL + +E E+E  L GHSEKLA+ FG+LN P G  ++V 
Sbjct: 655 EKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVI 714

Query: 785 KNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KNLR+CGDCH + KF+S  A REI +RD+NRFHHFKDG CSC  FW
Sbjct: 715 KNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 225/473 (47%), Gaps = 82/473 (17%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D+    ++ ++CA+L + + GK++H + C SG+ +D  V GS +  M++ CG + + R+V
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS-MFHMYMRCGRMGDARKV 173

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+++ +  V   + L+  Y++ G  +E + +  +M+S GI A                  
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA------------------ 215

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                           ++VSWN ++SG+  +G  ++ + +F+++ +LGF  D  T+ +VL
Sbjct: 216 ----------------NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVL 259

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF--------- 325
               +   L  GR +H + +K    K+    + ++DMY K G + G I +F         
Sbjct: 260 PSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAG 319

Query: 326 --------------------------EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                                     E+  E +VVSWTS+IAG A+ G    A+ LFR M
Sbjct: 320 VCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM 379

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
              G++P+   I S+L AC     L  G+  H +     +  +++V +AL+DMYAKCG +
Sbjct: 380 QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRI 439

Query: 420 ADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPAC 468
             ++ VFN MP K++V WN+++            + +F ++++   +PD ++   +L AC
Sbjct: 440 NLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC 499

Query: 469 ASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
             +   + G +    +   +GI       + +V++  + G L  A  L   +P
Sbjct: 500 GQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP 552



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 207/483 (42%), Gaps = 88/483 (18%)

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           HA  LK+    +   +  L+  YS     + A  V + + + ++ S++S+I    +  +F
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             +I +F  M   G+ PD + + ++   CA     ++GK +H     + +    +V  ++
Sbjct: 98  TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157

Query: 410 MDMYAKCGSMADAESVFNQMPVKD-----------------------------------I 434
             MY +CG M DA  VF++M  KD                                   I
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217

Query: 435 VSWNTMIGALDL------FVAMLQN-----FEPDGVTMACILPACASLAALERGREIHGY 483
           VSWN ++   +        V M Q      F PD VT++ +LP+      L  GR IHGY
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSL---FDMIPAK------------------ 522
           +++ G+  D+ V +A++DMY K G +    SL   F+M+ A                   
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337

Query: 523 --------------DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
                         +++SWT +IAG   +G   +A+  F +M+ AG++P+ V+  S+L A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           C +   +  G R  +      ++   +   + ++D+ ++ G ++ +     MMP   +  
Sbjct: 398 CGNIAALGHG-RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLV 455

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVF--ELEPDNTGYYVLLA---NVYAEAEKWEEVKKL 683
            W SL+ G  +H + K    + E +    L+PD   +  LL+    V    E W+  K +
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515

Query: 684 REK 686
            E+
Sbjct: 516 SEE 518



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 16/215 (7%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           A+ G+  E   L + M+V       K +  T  S+L  C ++ +L  G+  H       +
Sbjct: 364 AQNGKDIEALELFREMQV----AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
            +D+  +GS L+ M+  CG +   + VFN +    +  WN LM+ +S  G  KE + +F+
Sbjct: 420 -LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFE 478

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGY 242
            +    +  D  +F+ +L     VG      +  K F  +S+   +      ++CM++  
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVG---LTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
              G  ++  ++ KEM    F  D      +L+ C
Sbjct: 536 GRAGKLQEAYDLIKEM---PFEPDSCVWGALLNSC 567


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 227/570 (39%), Positives = 356/570 (62%), Gaps = 12/570 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           T ++ CA    L   R VHA    + F+ +   +N+L+ +Y KCG +  A +VF++M  +
Sbjct: 56  TFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRK 115

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            +VSWTS+IAGYA+  + + AI L  GM++   +P+ +   S+L A        IG+ +H
Sbjct: 116 DMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIH 175

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
               + D    +YV +AL+DMYA+CG M  A +VF+++  K+ VSWN +I          
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 443 -ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            AL  F  ML+N FE    T + +  + A L ALE+G+ +H ++++          N ++
Sbjct: 236 TALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLL 295

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY K G ++ AR +FD +  KDL++W  M+  +  +G G +A++ F +MR++GI  ++V
Sbjct: 296 DMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQV 355

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+ +L ACSH GLV EG R+F MM+ E ++EP+++H+  +V LL R G L+ A  FI  
Sbjct: 356 TFLCILTACSHGGLVKEGKRYFEMMK-EYDLEPEIDHFVTVVALLGRAGLLNFALVFIFK 414

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ P A +WG+LL  CR+H   K+ +  A+HVFEL+PD++G  VLL N+YA   +W+  
Sbjct: 415 MPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAA 474

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            ++R  +   G+KK P CSW+E++  V++FVA   +HP A++I  +  ++  ++++EGY 
Sbjct: 475 ARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYV 534

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P   Y L+  D+ E+E  L  HSEKLA+AF ++ +PAG TIR+ KN+R+CGDCH   K++
Sbjct: 535 PDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYI 594

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK   REIV+RD+NRFHHF +G CSC  +W
Sbjct: 595 SKVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 224/451 (49%), Gaps = 22/451 (4%)

Query: 153 RVFNKIDNGKVFIWNLLMHEY----SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           R  + +D G++     + H +    +++ N +++  +   + S   A D++  + ++   
Sbjct: 37  RDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLY 96

Query: 209 AVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
              G+   V +A K+FDE+  +D+VSW  +I+GY  N + E+ + +   ML   F  +  
Sbjct: 97  CKCGS---VLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGF 153

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T  ++L           GR +HA A+K  + +++   + LLDMY++CG +D A  VF+K+
Sbjct: 154 TFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKL 213

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             ++ VSW ++I+G+AR+G  + A+  F  M+R G E   +  +S+  + A  G LE GK
Sbjct: 214 DSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGK 273

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLF- 447
            VH ++ ++  + + +  N L+DMYAK GSM DA  VF+++  KD+V+WNTM+ A   + 
Sbjct: 274 WVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYG 333

Query: 448 -----VAMLQNFEPDG-----VTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                V+  +     G     VT  CIL AC+    ++ G+     +  + +  + +   
Sbjct: 334 LGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFV 393

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
            +V +  + G+L  A      +P +   + W  ++A   MH      +  F       ++
Sbjct: 394 TVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNA--KVGQFAADHVFELD 451

Query: 557 PDEVSFISVLYAC-SHSGLVDEGWRFFNMMR 586
           PD+     +LY   + +G  D   R   +M+
Sbjct: 452 PDDSGPPVLLYNIYASTGQWDAAARVRRIMK 482



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 178/380 (46%), Gaps = 34/380 (8%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + Y + +  CA  K+LED +KVH+ +  S     D  L + L+ ++  CG + E R+VF+
Sbjct: 52  RVYHTFITACAQSKNLEDARKVHAHLASSRFA-GDAFLDNSLIHLYCKCGSVLEARKVFD 110

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           ++    +  W  L+  Y++    +E++ L   M       + +TF+ +LK      +S  
Sbjct: 111 EMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGI 170

Query: 217 VKDAHKL--------------------------------FDELSDRDVVSWNCMISGYIA 244
            +  H L                                FD+L  ++ VSWN +ISG+  
Sbjct: 171 GRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFAR 230

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G  E  L  F EML  GF     T  +V S  A  GAL  G+ VHA  +K+        
Sbjct: 231 KGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFA 290

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            NTLLDMY+K G +  A +VF+++ ++ +V+W +M+  +A+ G+   A+  F  M + GI
Sbjct: 291 GNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGI 350

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
             +      IL AC+  GL++ GK   + +KE D++  +     ++ +  + G +  A  
Sbjct: 351 YLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALV 410

Query: 425 VFNQMPVKDIVS-WNTMIGA 443
              +MP++   + W  ++ A
Sbjct: 411 FIFKMPIEPTAAVWGALLAA 430


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/744 (35%), Positives = 398/744 (53%), Gaps = 92/744 (12%)

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
           DD  + + LV MFV CG +    R+F +I    +F  N ++  Y KT     +L      
Sbjct: 191 DDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHAL------ 244

Query: 190 QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                           +LFD + +RDVVSWN M+S    +G   
Sbjct: 245 --------------------------------ELFDSMPERDVVSWNMMVSALSQSGRVR 272

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L++  +M + G  +D  T  + L+ CA   +L +G+ +HA  ++     +    + L+
Sbjct: 273 EALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALV 332

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           ++Y+K G    A  VF  + +R+ V+WT +I+G+ + G F  ++ LF  M  E +  D +
Sbjct: 333 ELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQF 392

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           A+ +++  C     L +G+ +H    ++    ++ VSN+L+ MYAKC ++  AE++F  M
Sbjct: 393 ALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFM 452

Query: 430 PVKDIVSWNTMIGA-----------------------------------------LDLFV 448
             KDIVSW +MI A                                         L ++ 
Sbjct: 453 NEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYK 512

Query: 449 AML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
            ML  +   PD VT   +   CA L A + G +I G  ++ G+  D +VANA++ MY KC
Sbjct: 513 VMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKC 572

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G ++ AR +FD +  KD++SW  MI GY  HG G  AI  F+D+ + G +PD +S+++VL
Sbjct: 573 GRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVL 632

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
             CSHSGLV EG  +F+MM+   NI P LEH++CMVDLL R G+L+EA   I+ MP+ P 
Sbjct: 633 SGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPT 692

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
           A +WG+LL  C+IH   +LAE  A+HVFEL+  ++G Y+L+A +YA+A K ++  ++R+ 
Sbjct: 693 AEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKL 752

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +  +G+KKNPG SW+E+  KV++F A   SHP    I   L  L  ++ R GY       
Sbjct: 753 MRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGY------- 805

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
            +  D    E+    HSEKLA+AFG++ LP    I + KNLR+CGDCH + K +S    R
Sbjct: 806 -VRTDSTRSEIH---HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGR 861

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           E V+RD+ RFHHF  G CSC  +W
Sbjct: 862 EFVIRDAVRFHHFNGGSCSCGDYW 885



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 211/447 (47%), Gaps = 69/447 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +    + G + +A++++    S+  ++D+ TY S L  CA L SL  GK++H+ +
Sbjct: 257 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 316

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +   ID  V  S LV ++   G  KE + VFN + +     W +L+  + + G F ES
Sbjct: 317 IRNLPHIDPYV-ASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTES 375

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK--------CLA----------------VVGNS---- 214
           + LF +M++  +  D +  + ++         CL                 VV NS    
Sbjct: 376 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 435

Query: 215 ----RRVKDAHKLFDELSDRDVVS-------------------------------WNCMI 239
                 ++ A  +F  ++++D+VS                               WN M+
Sbjct: 436 YAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAML 495

Query: 240 SGYIANGVAEKGLEVFKEMLNLGF-NVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
             YI +G  E GL ++K ML+  +   D  T VT+  GCA+ GA   G  +    +K   
Sbjct: 496 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 555

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             + S  N ++ MYSKCG +  A +VF+ +  + +VSW +MI GY++ G+   AI +F  
Sbjct: 556 IIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 615

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCG 417
           +++ G +PD  +  ++L  C+  GL++ GK   D +K  +++   L   + ++D+  + G
Sbjct: 616 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAG 675

Query: 418 SMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +A+ + + MP+K     W  ++ A
Sbjct: 676 HLTEAKDLIDDMPMKPTAEVWGALLSA 702



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 149/593 (25%), Positives = 254/593 (42%), Gaps = 105/593 (17%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA-ADSYTFSCVLKCLAVVGNSRRVKDAH 221
           VF+ N L+H Y   G   ++    +++  + IA  +  T + +L   A +G   R+ DA 
Sbjct: 59  VFLQNTLLHAYLSCGALSDA----RRLLLMDIAHPNVITHNVMLNGYAKLG---RLSDAV 111

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           +LF  +  RDV SWN ++SGY  +      LE F  M   G +       T+     +CG
Sbjct: 112 ELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS--WPNAFTLACAMKSCG 169

Query: 282 ALMFGRAVHAFALK--ACFSKEISFNNT-----LLDMYSKCG------------------ 316
           AL +    H+ AL+  A   K  S +++     L+DM+ +CG                  
Sbjct: 170 ALGW----HSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMF 225

Query: 317 -------------DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
                         +D A+ +F+ M ER VVSW  M++  ++ G    A+ +   M  +G
Sbjct: 226 CRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 285

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           +  D    TS L ACA    L  GK +H  +  N      YV++AL+++YAK G   +A+
Sbjct: 286 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAK 345

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLA 472
            VFN +  ++ V+W  +I           +++LF  M       D   +A ++  C S  
Sbjct: 346 GVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRM 405

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
            L  GR++H   L+ G      V+N+++ MY KC  L  A ++F  +  KD++SWT MI 
Sbjct: 406 DLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT 465

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
            Y   G    A   F+ M     E + +++ ++L A    G  ++G R + +M  E  + 
Sbjct: 466 AYSQVGNVAKAREFFDGMS----EKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 521

Query: 593 PKLEHYACM-----------------------------------VDLLSRTGNLSEAYRF 617
           P    Y  +                                   + + S+ G + EA + 
Sbjct: 522 PDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKV 581

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
            + + V  D   W +++ G   H   K A ++ + + +   +PD   Y  +L+
Sbjct: 582 FDFLNV-KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 633



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 139/300 (46%), Gaps = 49/300 (16%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           +V  G+   V+   ++LHA    G L    D    +  +    ++   N +++ YAK G 
Sbjct: 50  LVAVGLASAVFLQNTLLHAYLSCGALS---DARRLLLMDIAHPNVITHNVMLNGYAKLGR 106

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE--PDGVTMACILP 466
           ++DA  +F +MP +D+ SWNT++           +L+ F++M ++ +  P+  T+AC + 
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 166

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR------------- 513
           +C +L       ++   + +     D  VA A+VDM+V+CG + LA              
Sbjct: 167 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 226

Query: 514 ------------------SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
                              LFD +P +D++SW +M++     G   +A+    DM+  G+
Sbjct: 227 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 286

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
             D  ++ S L AC+    +  G +    ++R   +I+P +   + +V+L +++G   EA
Sbjct: 287 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA--SALVELYAKSGCFKEA 344


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/722 (37%), Positives = 398/722 (55%), Gaps = 56/722 (7%)

Query: 159  DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--------- 209
            D   V +WN  +  + + G   E++  F  M +  +A D  TF  +L  +A         
Sbjct: 896  DGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGK 955

Query: 210  ---------------VVGN--------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                            VGN        +  V  A  +F ++++ D++SWN MISG   +G
Sbjct: 956  QIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSG 1015

Query: 247  VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC-GALMFGRAVHAFALKACFSKEISFN 305
            + E  + +F  +L      D  T+ +VL  C++  G       +HA A+KA    +   +
Sbjct: 1016 LEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVS 1075

Query: 306  NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
              L+D+YSK G ++ A  +F       + SW +++ GY   G F  A+RL+  M   G  
Sbjct: 1076 TALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGER 1135

Query: 366  PDVYAITSILHACACDGL--LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
             D   IT +  A A  GL  L+ GK +H  + +      L+V++ ++DMY KCG M  A 
Sbjct: 1136 SD--QITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESAR 1193

Query: 424  SVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLA 472
             VF+++P  D V+W TMI           AL  +  M L   +PD  T A ++ AC+ L 
Sbjct: 1194 RVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLT 1253

Query: 473  ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
            ALE+GR+IH  I++   + D  V  ++VDMY KCG +  AR LF     + + SW  MI 
Sbjct: 1254 ALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIV 1313

Query: 533  GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
            G   HG   +A+  F  M+  G+ PD V+FI VL ACSHSGLV E +  F  M+    IE
Sbjct: 1314 GLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIE 1373

Query: 593  PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
            P++EHY+C+VD LSR G + EA + I  MP    A+++ +LL  CR+  + +  ++VAE 
Sbjct: 1374 PEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEK 1433

Query: 653  VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
            +  LEP ++  YVLL+NVYA A +WE V   R  + +  +KK+PG SW+++K KV++FVA
Sbjct: 1434 LLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVA 1493

Query: 713  GGSSHPHA----KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            G  SH        K+E ++KR+R     EGY P T +AL++ +E +KE +L  HSEKLA+
Sbjct: 1494 GDRSHEETDVIYNKVEYIMKRIR----EEGYVPDTDFALVDVEEEDKECSLYYHSEKLAI 1549

Query: 769  AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
            A+G++  P   T+RV KNLRVCGDCH   K++SK  +REIVLRD+NRFHHF++G CSC  
Sbjct: 1550 AYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGD 1609

Query: 829  FW 830
            +W
Sbjct: 1610 YW 1611



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 231/504 (45%), Gaps = 52/504 (10%)

Query: 66   YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
            +N  + RF + G   +A++       S++  D  T+  +L + A L  LE GK++H I+ 
Sbjct: 903  WNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVM 962

Query: 124  ESGIVIDDGVL--GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             SG+   D V+  G+ L+ M+V  G +   R VF +++   +  WN ++   + +G  + 
Sbjct: 963  RSGL---DQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEEC 1019

Query: 182  SLYLFKKMQSLGIAADSYTFSCVLK-CLAVVGN--------------------------- 213
            S+ +F  +    +  D +T + VL+ C ++ G                            
Sbjct: 1020 SVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALI 1079

Query: 214  ---SRRVK--DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
               S+R K  +A  LF      D+ SWN ++ GYI +G   K L ++  M   G   D  
Sbjct: 1080 DVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQI 1139

Query: 269  TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            T+V           L  G+ +HA  +K  F+ ++   + +LDMY KCG+++ A RVF ++
Sbjct: 1140 TLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEI 1199

Query: 329  GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                 V+WT+MI+G    G  + A+  +  M    ++PD Y   +++ AC+    LE G+
Sbjct: 1200 PSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGR 1259

Query: 389  DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------- 441
             +H  I + +     +V  +L+DMYAKCG++ DA  +F +   + I SWN MI       
Sbjct: 1260 QIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHG 1319

Query: 442  ---GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVA 496
                AL  F  M  +   PD VT   +L AC+    +    E  +     +GI  +    
Sbjct: 1320 NAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHY 1379

Query: 497  NAIVDMYVKCGVLVLARSLFDMIP 520
            + +VD   + G +  A  +   +P
Sbjct: 1380 SCLVDALSRAGRIEEAEKVISSMP 1403



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 196/439 (44%), Gaps = 52/439 (11%)

Query: 217  VKDAHKLFDELSD--RDVVSWNCMISGYIANG-VAEKGLEVFKEMLNLGFNVDLATMVTV 273
            +  A KLFD   D  RD+V+WN ++S   A+   +  G  +F+ +     +    T+  V
Sbjct: 707  LSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPV 766

Query: 274  LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
               C    +     ++H +A+K     ++     L+++Y+K G +  A  +F+ M  R V
Sbjct: 767  FKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDV 826

Query: 334  VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
            V W  M+  Y    +   A+ LF    R G  PD   + ++     C             
Sbjct: 827  VLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKC------------- 873

Query: 394  IKENDMQSSLYVSNAL-MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
             K+N ++   + + A  + MY   GS              D++ WN  +           
Sbjct: 874  -KKNILELKQFKAYATKLFMYDDDGS--------------DVIVWNKALSRFLQRGEAWE 918

Query: 443  ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
            A+D FV M+ +    DG+T   +L   A L  LE G++IHG ++R G+    +V N +++
Sbjct: 919  AVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLIN 978

Query: 502  MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
            MYVK G +  ARS+F  +   DLISW  MI+G  + G    ++  F  + +  + PD+ +
Sbjct: 979  MYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFT 1038

Query: 562  FISVLYACSHSGLVDEGWRFFNMMRYECNIEPK--LEHY--ACMVDLLSRTGNLSEAYRF 617
              SVL ACS      EG  +     + C ++    L+ +    ++D+ S+ G + EA  F
Sbjct: 1039 VASVLRACSSL----EGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEA-EF 1093

Query: 618  IEMMPVAPDATIWGSLLCG 636
            + +     D   W +++ G
Sbjct: 1094 LFVNQDGFDLASWNAIMHG 1112



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-- 430
           SIL        L +GK  H  I  +      +V+N L+ MYAKCGS++ A  +F+  P  
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 431 VKDIVSWNTMIGAL-----------DLFVAMLQNF-EPDGVTMACILPACASLAALERGR 478
            +D+V+WN ++ AL            LF  + ++       T+A +   C   A+     
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
            +HGY ++ G+  D  VA A+V++Y K G++  AR LFD +  +D++ W +M+  Y    
Sbjct: 781 SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTC 840

Query: 539 FGCDAIATFNDMRQAGIEPDEVSF 562
              +A+  F++  + G  PD+V+ 
Sbjct: 841 LEYEAMLLFSEFHRTGFRPDDVTL 864



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 184/437 (42%), Gaps = 80/437 (18%)

Query: 65   NYNAEIGRFCEVGNLEKAME--VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            ++NA +  +   G+  KA+   +L      + D  T  +  +    L  L+ GK++H+++
Sbjct: 1105 SWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVV 1164

Query: 123  CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             + G  +D  V  S ++ M++ CG+++  RRVF++I +     W  ++    + G  + +
Sbjct: 1165 VKRGFNLDLFVT-SGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHA 1223

Query: 183  LYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRR----------------------- 216
            L+ + +M+   +  D YTF+ ++K    L  +   R+                       
Sbjct: 1224 LFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDM 1283

Query: 217  ------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                  ++DA  LF   + R + SWN MI G   +G A++ L+ FK M + G   D  T 
Sbjct: 1284 YAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTF 1343

Query: 271  VTVLSGCANCGALMFGRAVHAFALKACF--SKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            + VLS C++ G L+     + ++++  +    EI   + L+D  S+ G ++ A +V   M
Sbjct: 1344 IGVLSACSHSG-LVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSM 1402

Query: 329  GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                                F+ +  ++R               ++L+AC      E GK
Sbjct: 1403 P-------------------FEASASMYR---------------TLLNACRVQVDRETGK 1428

Query: 389  DVHD-YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VSWNTMIG 442
             V +  +      S+ YV   L ++YA      +  S  N M   ++      SW  +  
Sbjct: 1429 RVAEKLLALEPSDSAAYV--LLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKN 1486

Query: 443  ALDLFVAMLQNFEPDGV 459
             + LFVA  ++ E   V
Sbjct: 1487 KVHLFVAGDRSHEETDV 1503



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/382 (21%), Positives = 160/382 (41%), Gaps = 43/382 (11%)

Query: 272  TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE- 330
            ++L        L  G+  HA  L +    +    N L+ MY+KCG L  A ++F+   + 
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 331  -RSVVSWTSMIAGYAREG--VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
             R +V+W ++++  A       DG   LFR + R  +    + +  +   C         
Sbjct: 721  NRDLVTWNAILSALAAHADKSHDG-FHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSAS 779

Query: 388  KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLF 447
            + +H Y  +  +Q  ++V+ AL+++YAK G + +A  +F+ M V+D+V WN M       
Sbjct: 780  ESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVM------- 832

Query: 448  VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
                         M   +  C    A+    E H    R G   D +V    +   VKC 
Sbjct: 833  -------------MKAYVDTCLEYEAMLLFSEFH----RTGFRPD-DVTLRTLSRVVKCK 874

Query: 508  VLVLARSLFDMIPAK---------DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
              +L    F     K         D+I W   ++ +   G   +A+  F DM  + +  D
Sbjct: 875  KNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACD 934

Query: 559  EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-F 617
             ++F+ +L   +    ++ G +   ++     ++  +    C++++  + G++S A   F
Sbjct: 935  GLTFVVMLTVVAGLNCLELGKQIHGIV-MRSGLDQVVSVGNCLINMYVKAGSVSRARSVF 993

Query: 618  IEMMPVAPDATIWGSLLCGCRI 639
             +M  V  D   W +++ GC +
Sbjct: 994  GQMNEV--DLISWNTMISGCTL 1013


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 229/570 (40%), Positives = 353/570 (61%), Gaps = 12/570 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++++ CA    L   RA+HA   ++C + +    N+L+ MY KCG +  A  VF+KM  R
Sbjct: 65  SIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSR 124

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            VVSWT +IAGYA+  +   AI L   M+R    P+ +  TS+L A    G   IG+ +H
Sbjct: 125 DVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMH 184

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------- 443
               + +    +YV +AL+DMYA+C  M  A  VF+++  K+ VSWN +I          
Sbjct: 185 ALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGE 244

Query: 444 --LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             L  F  M +N F     T + +  A A + ALE+GR +H ++++ G      V N ++
Sbjct: 245 TTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTML 304

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
            MY K G +V AR +FD +  +DL++W  M+     +G G +A+A F ++R+ GI+ +++
Sbjct: 305 GMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQI 364

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+SVL ACSH GLV EG  +F+MM+ + N++P+++HY   VDLL R G L EA  F+  
Sbjct: 365 TFLSVLTACSHGGLVKEGKHYFDMMK-DYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFK 423

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ P A +WG+LL  CR+H   K+ +  A+HVFEL+PD+TG  VLL N+YA   KW + 
Sbjct: 424 MPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDA 483

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            ++R+ +   G+KK P CSW++I+  V++FVA   +HP +  I  + + + + +K+ GY 
Sbjct: 484 ARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYV 543

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T + L++ +E E+E  L  HSEK+A+AF ++N+PAG +IR+ KN+R+CGDCH   K++
Sbjct: 544 PNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYV 603

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK  +REIV+RD+NRFHHF +G CSC  +W
Sbjct: 604 SKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 182/356 (51%), Gaps = 15/356 (4%)

Query: 194 IAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
           +A D++  + ++      G    V DA  +FD++  RDVVSW  +I+GY  N +  + + 
Sbjct: 91  LAGDAFLLNSLIHMYCKCGA---VSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIG 147

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           +  +ML   F  +  T  ++L     CG    G  +HA A+K  + +++   + LLDMY+
Sbjct: 148 LLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYA 207

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
           +C  +D AI VF+++  ++ VSW ++IAG+AR+   +  +  F  M R G     +  +S
Sbjct: 208 RCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSS 267

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD 433
           +  A A  G LE G+ VH ++ ++  + + +V N ++ MYAK GSM DA  VF++M  +D
Sbjct: 268 MFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRD 327

Query: 434 IVSWNTMIGALDLF------VAMLQNFEPDG-----VTMACILPACASLAALERGREIHG 482
           +V+WNTM+ AL  +      VA  +     G     +T   +L AC+    ++ G+    
Sbjct: 328 LVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD 387

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
            +  + +  + +   + VD+  + G+L  A      +P +   + W  ++    MH
Sbjct: 388 MMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 443



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 185/396 (46%), Gaps = 35/396 (8%)

Query: 81  KAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF 140
           + +++L++ E +    + Y SI+  CA  K+L   + +H+ +  S +  D  +L S L+ 
Sbjct: 46  RELDLLHAGELAPT-PRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNS-LIH 103

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+  CG + + R VF+K+ +  V  W  L+  Y++     E++ L   M       + +T
Sbjct: 104 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 163

Query: 201 FSCVLKCLAVVGNSRRVKDAHKL--------------------------------FDELS 228
           F+ +LK     G     +  H L                                FD L 
Sbjct: 164 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 223

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            ++ VSWN +I+G+      E  L  F EM   GF     T  ++ S  A  GAL  GR 
Sbjct: 224 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 283

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VHA  +K+         NT+L MY+K G +  A +VF++M +R +V+W +M+   A+ G+
Sbjct: 284 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 343

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+  F  + + GI+ +     S+L AC+  GL++ GK   D +K+ ++Q  +    +
Sbjct: 344 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS 403

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            +D+  + G + +A     +MP++   + W  ++GA
Sbjct: 404 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 439



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 135/305 (44%), Gaps = 29/305 (9%)

Query: 43  HSSCTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TY 99
           ++ C    ++  +   LV K + ++NA I  F    + E  +      +++       TY
Sbjct: 206 YARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTY 265

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
            S+    A + +LE G+ VH+ + +SG  +    +G+ ++ M+   G + + R+VF+++D
Sbjct: 266 SSMFSAFARIGALEQGRWVHAHLIKSGQKLT-AFVGNTMLGMYAKSGSMVDARKVFDRMD 324

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
              +  WN ++   ++ G  KE++  F++++  GI  +  TF   L  L    +   VK+
Sbjct: 325 KRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITF---LSVLTACSHGGLVKE 381

Query: 220 AHKLFDELSDRDVVSWNCMISGYIA--NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
               FD + D +V      I  Y++  + +   GL   KE L   F + +     V    
Sbjct: 382 GKHYFDMMKDYNV---QPEIDHYVSFVDLLGRAGL--LKEALIFVFKMPMEPTAAVW--- 433

Query: 278 ANCGALMFGRAVHAFALKACFSK----EISFNNT-----LLDMYSKCGDLDGAIRVFEKM 328
              GAL+    +H  A    ++     E+  ++T     L ++Y+  G  + A RV + M
Sbjct: 434 ---GALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMM 490

Query: 329 GERSV 333
               V
Sbjct: 491 KATGV 495


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/655 (38%), Positives = 383/655 (58%), Gaps = 47/655 (7%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG-KVFIWNLLMHEY 173
           GK +H  I   G+  ++  L   L+ ++ +C   +  + VF  I+N   + +WN LM   
Sbjct: 214 GKLIHQKIVSLGLQ-NNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAAC 272

Query: 174 SKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKC---LAVVGNSRRV------------ 217
           +K   F E L +F ++     +  D++T+  VLK    L  VG  + V            
Sbjct: 273 TKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMD 332

Query: 218 -----------------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
                            +DA KLFDE+ +RDV SWN +IS Y  +G  EK LE+F+EM  
Sbjct: 333 VVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKV 392

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
            GF  D  T+ TV+S CA    L  G+ +H   +++ F+ +   ++ L+DMY KCG L+ 
Sbjct: 393 SGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEM 452

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A  VFE++  ++VVSW SMIAGY+ +G     I LFR M  EGI P +  ++SIL AC+ 
Sbjct: 453 AKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSR 512

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              L++GK +H YI  N +++ ++V+++L+D+Y KCG++  AE+VF  MP  ++VSWN M
Sbjct: 513 SVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVM 572

Query: 441 IG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
           I           AL +F  M +   +PD +T   +LPAC+ LA LE+G+EIH +I+   +
Sbjct: 573 ISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL 632

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             +  V  A++DMY KCG +  A  +F+ +P +D +SWT MIA YG HG   +A+  F  
Sbjct: 633 EINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEK 692

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M+Q+  +PD+V+F+++L ACSH+GLVDEG  +FN M  E   +P +EHY+C++DLL R G
Sbjct: 693 MQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVG 752

Query: 610 NLSEAYRFIEMMP-VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
            L EAY  ++  P +  D  +  +L   C +H ++ L E++   + E +PD+   Y++L+
Sbjct: 753 RLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILS 812

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
           N+YA  +KW+EV+K+R KI   GLKKNPGCSWIE+  +++ FV    SHP A  I
Sbjct: 813 NMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMI 867



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 246/472 (52%), Gaps = 45/472 (9%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  TY S+L+ C+ L  +  GK VH+ + +SG  +D  V+ S  V M+  C   ++  
Sbjct: 295 KPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSA-VGMYAKCNVFEDAI 353

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           ++F+++    V  WN ++  Y + G  +++L LF++M+  G   DS T + V+   A + 
Sbjct: 354 KLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLL 413

Query: 213 NSRRVKDAH--------------------------------KLFDELSDRDVVSWNCMIS 240
           +  R K+ H                                ++F+++  ++VVSWN MI+
Sbjct: 414 DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIA 473

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY   G ++  +E+F+ M   G    L T+ ++L  C+    L  G+ +H + ++     
Sbjct: 474 GYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEA 533

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           +I  N++L+D+Y KCG++  A  VF+ M + +VVSW  MI+GY + G +  A+ +F  M 
Sbjct: 534 DIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMR 593

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           + G++PD    TS+L AC+   +LE GK++H++I E+ ++ +  V  AL+DMYAKCG++ 
Sbjct: 594 KAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVD 653

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACA 469
           +A  +FNQ+P +D VSW +MI           AL LF  M Q + +PD VT   IL AC+
Sbjct: 654 EALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACS 713

Query: 470 SLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
               ++ G    +  I  +G        + ++D+  + G L  A  +    P
Sbjct: 714 HAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTP 765



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 188/401 (46%), Gaps = 36/401 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  + + G  EKA+E+    + S  K D+ T  +++  CA L  LE GK++H  +
Sbjct: 366 SWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMEL 425

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG  +D G + S LV M+  CG L+  + VF +I    V  WN ++  YS  G+ K  
Sbjct: 426 VRSGFALD-GFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSC 484

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR--------------------------- 215
           + LF++M   GI     T S +L   +   N +                           
Sbjct: 485 IELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDL 544

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 +  A  +F  +   +VVSWN MISGY+  G   + L +F +M   G   D  T 
Sbjct: 545 YFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITF 604

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +VL  C+    L  G+ +H F +++           LLDMY+KCG +D A+ +F ++ E
Sbjct: 605 TSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPE 664

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KD 389
           R  VSWTSMIA Y   G    A++LF  M +   +PD     +IL AC+  GL++ G   
Sbjct: 665 RDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYY 724

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
            +  I E   + ++   + L+D+  + G + +A  +  + P
Sbjct: 725 FNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTP 765



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 35/299 (11%)

Query: 362 EGIEPDVYAITSILHACACDGLLE--IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           EGI   V A    L        LE  +GK +H  I    +Q+++ +  +L+++Y  C   
Sbjct: 187 EGIWYRVLARNRCLARVTAGSALEELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLF 246

Query: 420 ADAESVFNQM--PVKDIVSWNTMIGA----------LDLFVAMLQ--NFEPDGVTMACIL 465
             A+ VF  +  P+ DI  WN ++ A          L++F  +L     +PD  T   +L
Sbjct: 247 QSAKLVFQTIENPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVL 305

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
            AC+ L  +  G+ +H ++++ G + D  V ++ V MY KC V   A  LFD +P +D+ 
Sbjct: 306 KACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVA 365

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           SW  +I+ Y   G    A+  F +M+ +G +PD V+  +V+ +C+         R  ++ 
Sbjct: 366 SWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCA---------RLLDLE 416

Query: 586 R-YECNIEPKLEHYA-------CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           R  E ++E     +A        +VD+  + G L  A    E +    +   W S++ G
Sbjct: 417 RGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQ-RKNVVSWNSMIAG 474


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 224/569 (39%), Positives = 359/569 (63%), Gaps = 13/569 (2%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L+ C     L  GRA+HA    + F  ++   N +L+MY+KCG L+ A  +F+KM  + 
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           +VSWT +I+GY++ G    A+ LF  M+  G +P+ + ++S+L A         G+ +H 
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA--------- 443
           +  +     +++V ++L+DMYA+   M +A+ +FN +  K++VSWN +I           
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290

Query: 444 -LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
            + LF  ML Q FEP   T + +L ACAS  +LE+G+ +H ++++ G      + N ++D
Sbjct: 291 VMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 349

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY K G +  A+ +F  +  +D++SW  +I+GY  HG G +A+  F  M +A ++P+E++
Sbjct: 350 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 409

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           F+SVL ACSHSGL+DEG  +F +M+ +  IE ++ H+  +VDLL R G L+EA +FIE M
Sbjct: 410 FLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEM 468

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P+ P A +WG+LL  CR+H  + L    AE +FEL+P ++G +VLL+N+YA A +  +  
Sbjct: 469 PIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAA 528

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           K+R+ +   G+KK P CSW+EI+ +V++FVA   SHP  ++I+ + +++  ++K  GY P
Sbjct: 529 KVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVP 588

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            T + L   ++ ++E+ L  HSEKLA+AF +L  P G TIR+ KN+R+CGDCH   KF S
Sbjct: 589 DTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFAS 648

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +   REI++RD+NRFHHF  G CSCR +W
Sbjct: 649 RVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 217/411 (52%), Gaps = 27/411 (6%)

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS 198
           V   + CG L+  R +++K+ N   ++  L           K+   +   +QS     D 
Sbjct: 92  VLDLINCGSLEPERTLYSKMLNKCTYLRKL-----------KQGRAIHAHIQSSTFEDDL 140

Query: 199 YTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
              + +L   A  G+   +++A  LFD++  +D+VSW  +ISGY  +G A + L +F +M
Sbjct: 141 VLLNFILNMYAKCGS---LEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKM 197

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
           L+LGF  +  T+ ++L       +   GR +HAF+LK  +   +   ++LLDMY++   +
Sbjct: 198 LHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHM 257

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
             A  +F  +  ++VVSW ++IAG+AR+G  +  +RLF  M+R+G EP  +  +S+L AC
Sbjct: 258 REAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-AC 316

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
           A  G LE GK VH ++ ++  Q   Y+ N L+DMYAK GS+ DA+ VF ++  +DIVSWN
Sbjct: 317 ASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWN 376

Query: 439 TMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH 487
           ++I           AL LF  ML+   +P+ +T   +L AC+    L+ G+     + +H
Sbjct: 377 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH 436

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
            I A       +VD+  + G L  A    + +P K   + W  ++    MH
Sbjct: 437 KIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMH 487



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 211/399 (52%), Gaps = 42/399 (10%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y  +L  C  L+ L+ G+ +H+ I +S    DD VL + ++ M+  CG L+E + +F+K+
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHI-QSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKM 166

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV-------- 210
               +  W +L+  YS++G   E+L LF KM  LG   + +T S +LK            
Sbjct: 167 PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGR 226

Query: 211 ----------------VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                           VG+S          +++A  +F+ L+ ++VVSWN +I+G+   G
Sbjct: 227 QLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKG 286

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
             E  + +F +ML  GF     T  +VL+ CA+ G+L  G+ VHA  +K+         N
Sbjct: 287 EGEHVMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGGQPIAYIGN 345

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           TL+DMY+K G +  A +VF ++ ++ +VSW S+I+GYA+ G+   A++LF  M++  ++P
Sbjct: 346 TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQP 405

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           +     S+L AC+  GLL+ G+   + +K++ +++ +     ++D+  + G + +A    
Sbjct: 406 NEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFI 465

Query: 427 NQMPVKDIVS-WNTMIGA------LDLFV-AMLQNFEPD 457
            +MP+K   + W  ++GA      +DL V A  Q FE D
Sbjct: 466 EEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELD 504



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 169/389 (43%), Gaps = 74/389 (19%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  S+L+      S   G+++H+   + G  ++  V GS L+ M+     ++E + +FN 
Sbjct: 208 TLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHV-GSSLLDMYARWAHMREAKVIFNS 266

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---------- 207
           +    V  WN L+  +++ G  +  + LF +M   G     +T+S VL C          
Sbjct: 267 LAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQGK 326

Query: 208 -------------LAVVGN--------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                        +A +GN        S  +KDA K+F  L  +D+VSWN +ISGY  +G
Sbjct: 327 WVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG 386

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           +  + L++F++ML      +  T ++VL+ C++ G L  G+       K     +++ + 
Sbjct: 387 LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHV 446

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           T++D+  + G L+ A +  E+M  +   + W +++          GA R+ + M     +
Sbjct: 447 TVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL----------GACRMHKNM-----D 491

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
             VYA   I              D HD        S  +V   L ++YA  G ++DA  V
Sbjct: 492 LGVYAAEQIFEL-----------DPHD--------SGPHV--LLSNIYASAGRLSDAAKV 530

Query: 426 FNQMPVKDI-----VSWNTMIGALDLFVA 449
              M    +      SW  +   + +FVA
Sbjct: 531 RKMMKESGVKKEPACSWVEIENEVHVFVA 559



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 4/143 (2%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I      G  E  M +     +   +    TY S+L  CA   SLE GK VH+ +
Sbjct: 274 SWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHV 332

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +SG       +G+ L+ M+   G +K+ ++VF ++    +  WN ++  Y++ G   E+
Sbjct: 333 IKSG-GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEA 391

Query: 183 LYLFKKMQSLGIAADSYTFSCVL 205
           L LF++M    +  +  TF  VL
Sbjct: 392 LQLFEQMLKAKVQPNEITFLSVL 414


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 229/591 (38%), Positives = 356/591 (60%), Gaps = 13/591 (2%)

Query: 253  EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
            E   EM   G  V+     +VL+ C +  A+  G+ VHA  +K C+   +     L+ +Y
Sbjct: 463  EALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLY 522

Query: 313  SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
            +KC  L  A RV ++M ER+VVSWT+MI+GY++ G    A+ LF  M+  G  P+ +   
Sbjct: 523  NKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFA 582

Query: 373  SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
            ++L +C      ++G+ +H  + +   +S ++V ++L+DMYAK G + +A  VF+ +P +
Sbjct: 583  TVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER 642

Query: 433  DIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIH 481
            D+VS   +I           ALDLF  +  +    + VT A +L A + LAAL+ GR++H
Sbjct: 643  DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVH 702

Query: 482  GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
             ++LR  +     + N+++DMY KCG L  +R +FD +P + +ISW  M+ GY  HG G 
Sbjct: 703  SHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGR 762

Query: 542  DAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEGWR-FFNMMRYECNIEPKLEHYA 599
            +A+  F  M++   ++PD V+F++VL  CSH G+ D G   F+ M+  +   EP++EHY 
Sbjct: 763  EAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG 822

Query: 600  CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
            C+VDL  R G + EA+ FI+ MP  P A IWGSLL  CR+H  V + E VA  + E+E +
Sbjct: 823  CVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESE 882

Query: 660  NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
            N G YV+L+N+YA A +W++V+ +RE +  + + K PG SWIE+   ++ F A   SHP 
Sbjct: 883  NAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPR 942

Query: 720  AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
             +++ + ++ L +++K  GY P+    L + D+ +KE  L GHSEKLA+AFG++  P G 
Sbjct: 943  KEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGT 1002

Query: 780  TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             +R+ KNLR+C DCH  AKF+S+   RE+ LRD NRFHH   G CSC  +W
Sbjct: 1003 PVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 176/329 (53%), Gaps = 14/329 (4%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           + + +    R + DA ++ DE+ +R+VVSW  MISGY   G A + L +F EML  G   
Sbjct: 517 RLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAP 576

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +  T  TVL+ C +      GR +H+  +K  F   I   ++LLDMY+K G +  A RVF
Sbjct: 577 NEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF 636

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           + + ER VVS T++I+GYA+ G+ + A+ LFR + REG+  +     S+L A +    L+
Sbjct: 637 DGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALD 696

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---- 441
            G+ VH ++    +   + + N+L+DMY+KCGS+  +  +F+ MP + ++SWN M+    
Sbjct: 697 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYS 756

Query: 442 ------GALDLFVAMLQ--NFEPDGVTMACILPACASLAALERGREIHGYIL--RHGISA 491
                  A++LF  M +    +PD VT   +L  C+     +RG EI   ++  + G   
Sbjct: 757 KHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 816

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           +      +VD++ + G +  A      +P
Sbjct: 817 EIEHYGCVVDLFGRAGRVEEAFEFIKKMP 845



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 198/387 (51%), Gaps = 37/387 (9%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           +++ + Y S+L  C    ++ +G++VH+ + ++        L ++L+ ++  C  L + R
Sbjct: 474 EVEFQGYDSVLTECISQTAIREGQRVHAHMIKT-CYEPPVYLRTRLIVLYNKCRCLGDAR 532

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----- 207
           RV +++    V  W  ++  YS+ G   E+L+LF +M   G A + +TF+ VL       
Sbjct: 533 RVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSS 592

Query: 208 ---------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                      L +   + ++ +A ++FD L +RDVVS   +IS
Sbjct: 593 GFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIIS 652

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY   G+ E+ L++F+ +   G   +  T  +VL+  +   AL  GR VH+  L+A    
Sbjct: 653 GYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPF 712

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            +   N+L+DMYSKCG L  + R+F+ M ER+V+SW +M+ GY++ G+   A+ LF+ M 
Sbjct: 713 YVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMK 772

Query: 361 REG-IEPDVYAITSILHACACDGLLEIGKDV-HDYIKEND-MQSSLYVSNALMDMYAKCG 417
            E  ++PD     ++L  C+  G+ + G ++ ++ + + D  +  +     ++D++ + G
Sbjct: 773 EENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAG 832

Query: 418 SMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +A     +MP +   + W +++GA
Sbjct: 833 RVEEAFEFIKKMPFEPTAAIWGSLLGA 859



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 168/380 (44%), Gaps = 57/380 (15%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIIC----ESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           T+ ++L  C      + G+++HS++     ES I +     GS L+ M+   G + E RR
Sbjct: 580 TFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV-----GSSLLDMYAKAGKICEARR 634

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAV 210
           VF+ +    V     ++  Y++ G  +E+L LF+++Q  G+ ++  T++ VL     LA 
Sbjct: 635 VFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAA 694

Query: 211 VGNSRRVKD-----------------------------AHKLFDELSDRDVVSWNCMISG 241
           + + R+V                               + ++FD + +R V+SWN M+ G
Sbjct: 695 LDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG 754

Query: 242 YIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAF----ALKA 296
           Y  +G+  + +E+FK M        D  T + VLSGC++ G  M  R +  F      K 
Sbjct: 755 YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGG--MEDRGLEIFYEMVNQKD 812

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMI-AGYAREGVFDGAIR 354
            F  EI     ++D++ + G ++ A    +KM  E +   W S++ A    + V  G   
Sbjct: 813 GFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFV 872

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM-----QSSLYVSNAL 409
             R +  E      Y I S L+A A  G  +  + V + +KE  +     +S + +   L
Sbjct: 873 ARRLLEIESENAGNYVILSNLYASA--GRWDDVRTVRELMKEKAVIKEPGRSWIELDQTL 930

Query: 410 MDMYAKCGSMADAESVFNQM 429
              +A   S    E VF ++
Sbjct: 931 HTFHASDRSHPRKEEVFAKV 950



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 133/288 (46%), Gaps = 24/288 (8%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICE 124
            A I  + ++G  E+A+++    ++  + +   TY S+L   + L +L+ G++VHS +  
Sbjct: 648 TAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR 707

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
           + +     VL + L+ M+  CG L   RR+F+ +    V  WN ++  YSK G  +E++ 
Sbjct: 708 AKLPFYV-VLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVE 766

Query: 185 LFKKMQSLG-IAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR------DVVSWNC 237
           LFK M+    +  DS TF  VL   +  G   R     ++F E+ ++      ++  + C
Sbjct: 767 LFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDR---GLEIFYEMVNQKDGFEPEIEHYGC 823

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           ++  +   G  E+  E  K+M    F    A   ++L  C     +  G  V    L+  
Sbjct: 824 VVDLFGRAGRVEEAFEFIKKM---PFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLE-- 878

Query: 298 FSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSVV-----SWTSM 339
              E + N  +L ++Y+  G  D    V E M E++V+     SW  +
Sbjct: 879 IESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIEL 926


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/657 (39%), Positives = 385/657 (58%), Gaps = 31/657 (4%)

Query: 199 YTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR--DVVSWNCMISGYIANGVAEKGLEVFK 256
           + F+ +L   A +G    V DA +LF   +    DVV+WN M+S  + +G+ ++ ++   
Sbjct: 52  FAFNALLSMYARLG---LVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLY 108

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN----TLLDMY 312
           +M+ LG   D  T  + L  C+    L  GR +HA+ +K     E++ N+     L+DMY
Sbjct: 109 DMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK---DDELAANSFVASALVDMY 165

Query: 313 SKCGDLDGAIRVFEKMGE--RSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVY 369
           +    +  A +VF+ + +  + +  W +MI GYA+ G+ + A+RLF  M  E G  P   
Sbjct: 166 ATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCET 225

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            + S+L ACA        + VH Y+ +  M  + +V NALMDMYA+ G    A  +F  +
Sbjct: 226 TMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMV 285

Query: 430 PVKDIVSWNTMI----------GALDLFVAMLQNFE----PDGVTMACILPACASLAALE 475
            + D+VSWNT+I           A  L   M Q  E    P+ +T+  +LP CA LAA  
Sbjct: 286 DLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPA 345

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
           RG+EIHGY +RH +  D  V +A+VDMY KCG L L+R++FD +P ++ I+W ++I  YG
Sbjct: 346 RGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYG 405

Query: 536 MHGFGCDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
           MHG G +A   F+ M  +G   P+EV+F++ L ACSHSG+VD G + F+ M  +  +EP 
Sbjct: 406 MHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPT 465

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVA-PDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            +  AC+VD+L R G L EAY  +  M       + W ++L  CR+H  V L E   E +
Sbjct: 466 PDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERL 525

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
            ELEP+   +YVLL N+Y+ A +W    ++R ++ RRG+ K PGCSWIE+ G ++ F+AG
Sbjct: 526 LELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAG 585

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
            S+HP ++++ + ++ L  EM   GY P T   L + D+ +K   L  HSEKLA+AFG+L
Sbjct: 586 ESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLL 645

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               G TIRV KNLRVC DCHE AKF+SK   REIVLRD  RFHHF++G+CSC  +W
Sbjct: 646 RAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 226/494 (45%), Gaps = 57/494 (11%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLG-SKLVFMFVTCGDLKEGRRVFNKID 159
           ++  L A   ++  G++ H+   ++G++        + L+ M+   G + + +R+F    
Sbjct: 19  AVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGAT 78

Query: 160 NGK--VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------- 209
            G+  V  WN ++    ++G F E++     M +LG+  D  TF+  L   +        
Sbjct: 79  PGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 138

Query: 210 ------------VVGNS-------------RRVKDAHKLFDELSD--RDVVSWNCMISGY 242
                       +  NS              +V  A ++FD + D  + +  WN MI GY
Sbjct: 139 REMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGY 198

Query: 243 IANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
              G+ E+ L +F  M    GF     TM +VL  CA   A     AVH + +K   +  
Sbjct: 199 AQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGN 258

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
               N L+DMY++ G  D A R+F  +    VVSW ++I G   +G    A +L R M +
Sbjct: 259 RFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQ 318

Query: 362 ---EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
               G+ P+   + ++L  CA       GK++H Y   + + + + V +AL+DMYAKCG 
Sbjct: 319 LEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGC 378

Query: 419 MADAESVFNQMPVKDIVSWNTMIGALD----------LFVAMLQNFE--PDGVTMACILP 466
           +A + +VF+++P ++ ++WN +I A            LF  M  + E  P+ VT    L 
Sbjct: 379 LALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALA 438

Query: 467 ACASLAALERGREI-HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA--KD 523
           AC+    ++RG ++ H     HG+    ++   +VD+  + G L  A ++   + A  + 
Sbjct: 439 ACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQ 498

Query: 524 LISWTIMIAGYGMH 537
           + +W+ M+    +H
Sbjct: 499 VSAWSTMLGACRLH 512



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 7/177 (3%)

Query: 465 LPACASLAALERGREIHGYILRHGI--SADRNVANAIVDMYVKCGVLVLARSLF-DMIPA 521
           LPA A  AA+  GRE H + L++G+     R   NA++ MY + G++  A+ LF    P 
Sbjct: 23  LPAAA--AAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPG 80

Query: 522 K-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
           + D+++W  M++     G   +A+ T  DM   G+ PD V+F S L ACS   L+D G  
Sbjct: 81  RGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGRE 140

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP-VAPDATIWGSLLCG 636
               +  +  +       + +VD+ +    + +A +  +M+P       +W +++CG
Sbjct: 141 MHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICG 197



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 132/334 (39%), Gaps = 53/334 (15%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK---TYCSILQLCADLKSLEDGKKVHSII 122
           +NA I  + + G  E+A+ +    E          T  S+L  CA  ++    + VH  +
Sbjct: 191 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYV 250

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+   +  + + L+ M+   G     RR+F  +D   V  WN L+      G+  ++
Sbjct: 251 VKRGMA-GNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 309

Query: 183 LYLFKKMQSL---GIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------ 221
             L ++MQ L   G+  ++ T   +L   A++    R K+ H                  
Sbjct: 310 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSAL 369

Query: 222 --------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVD 266
                          +FD L  R+ ++WN +I  Y  +G+  +   +F  M   G    +
Sbjct: 370 VDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 429

Query: 267 LATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
             T +  L+ C++ G +  G +  HA                ++D+  + G LD A  + 
Sbjct: 430 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 489

Query: 326 EKM--GERSVVSWTSMIAGYAREGVFDGAIRLFR 357
             M  GE+ V +W++M+          GA RL R
Sbjct: 490 TSMEAGEQQVSAWSTML----------GACRLHR 513


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 275/780 (35%), Positives = 402/780 (51%), Gaps = 83/780 (10%)

Query: 106 CADLKSLEDGKKVHSIICESGIVID-----------DGVLGSKLVFMFVTCGDLKEGRRV 154
           C  + S  D   V S + + G V D           D    + ++  +   G L E R++
Sbjct: 35  CGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKL 94

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-------- 206
           F +        W+ L+  Y + G   E+L LF +MQ  G   + +T+  VL+        
Sbjct: 95  FYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLL 154

Query: 207 ------------------CLAVVG------NSRRVKDAHKLFDELSD-RDVVSWNCMISG 241
                                V G        + + +A  LF+   D R+ V W  M++G
Sbjct: 155 EKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTG 214

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y  NG   K +E F++M   G   +  T  ++L+ C +  A  FG  VH   +++ F   
Sbjct: 215 YSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGAN 274

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +   + L+DMYSKCGDL  A R+ E M     VSW SMI G  R+G+ + A+ LFR M  
Sbjct: 275 VFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHL 334

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
             ++ D +   S+L+  +    +     VH  I +   ++   V+NAL+DMYAK G    
Sbjct: 335 RHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDY 394

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACAS 470
           A  VF +M  KD++SW +++           AL LF  M +    PD + +A +L ACA 
Sbjct: 395 AFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAE 454

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           L  LE G+++H   L+ G+ +  +V N++V MY KCG +  A  +FD +  +D+I+WT +
Sbjct: 455 LTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTAL 514

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I GY  +G G D                            H+GLV+ G  +F  M     
Sbjct: 515 IVGYAQNGRGRD----------------------------HAGLVEHGRSYFQSMEEVYG 546

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           I+P  EHYACM+DLL R+G L EA   +  M V PDAT+W +LL  CR+H  V+L E+ A
Sbjct: 547 IKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAA 606

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
            ++FELEP N   YVLL+N+Y+ A KWEE  K R  +  RG+ K PGCSWIE+  KV+ F
Sbjct: 607 NNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRF 666

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
           ++   SHP   +I S +  + + +K  GY P   +AL + DE  KE+ L  HSEKLA+AF
Sbjct: 667 MSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAF 726

Query: 771 GILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G+L +P G  IR+ KNLR+CGDCH   K++S    R ++LRDSN FHHF++G CSC  +W
Sbjct: 727 GLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 161/584 (27%), Positives = 265/584 (45%), Gaps = 90/584 (15%)

Query: 74  CEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV 133
           C+V  LE   E+ Y  E+   +  T+ S+L++C+    LE GK++H+   ++    +  V
Sbjct: 118 CDVEALELFWEMQYEGERP--NQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFV 175

Query: 134 LGSKLVFMFVTCGDLKEGRRVFN-KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
           + + LV M+  C  + E   +F    D     +W  ++  YS+ G+  +++  F+ M+  
Sbjct: 176 V-TGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGE 234

Query: 193 GIAADSYTFSCVLK----------------CLAVVGNSRRV----------------KDA 220
           GI  + +TF  +L                 C+   G    V                 +A
Sbjct: 235 GIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNA 294

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
            ++ + +   D VSWN MI G +  G+ E+ L +F+ M      +D  T  +VL+  +  
Sbjct: 295 RRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFV 354

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
             +    +VH+  +K  F      NN L+DMY+K G  D A  VFEKM ++ V+SWTS++
Sbjct: 355 MDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLV 414

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
            G    G ++ A+RLF  M   GI PD   I ++L ACA   +LE GK VH    ++ + 
Sbjct: 415 TGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLG 474

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVT 460
           SSL V N+L+ MYAKCG + DA  VF+ M ++D+++W  +I      V   QN       
Sbjct: 475 SSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALI------VGYAQN------- 521

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
                          RGR+ H  ++ HG S  +++                   ++ + P
Sbjct: 522 --------------GRGRD-HAGLVEHGRSYFQSM-----------------EEVYGIKP 549

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
             +   +  MI   G  G   +A    N M    ++PD   + ++L AC   G V+ G R
Sbjct: 550 GPE--HYACMIDLLGRSGKLMEAKELLNQM---AVQPDATVWKALLAACRVHGNVELGER 604

Query: 581 FFNMMRYECNIEPK-LEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
             N + +E  +EPK    Y  + +L S  G   EA +   +M +
Sbjct: 605 AANNL-FE--LEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKL 645



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 187/418 (44%), Gaps = 73/418 (17%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIIC 123
           + A +  + + G+  KA+E         I+    T+ SIL  C  + +   G +VH  I 
Sbjct: 208 WTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIV 267

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            SG   +  V GS LV M+  CGDL   RR+   ++      WN ++    + G  +E+L
Sbjct: 268 RSGFGANVFV-GSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEAL 326

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL-------------------- 223
            LF+ M    +  D +T+  VL C + V + R     H L                    
Sbjct: 327 SLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMY 386

Query: 224 ------------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                       F++++D+DV+SW  +++G + NG  E+ L +F EM  +G + D   + 
Sbjct: 387 AKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIA 446

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
            VLS CA    L FG+ VHA  LK+     +S +N+L+ MY+KCG ++ A +VF+ M  +
Sbjct: 447 AVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQ 506

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE-----PDVYAITSILHACACDGLLEI 386
            V++WT++I GYA+    +G  R   G+V  G        +VY I       AC      
Sbjct: 507 DVITWTALIVGYAQ----NGRGRDHAGLVEHGRSYFQSMEEVYGIKPGPEHYAC------ 556

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
                                 ++D+  + G + +A+ + NQM V+ D   W  ++ A
Sbjct: 557 ----------------------MIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAA 592



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 81/200 (40%), Gaps = 32/200 (16%)

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C  L   E    I  ++   G     + +N ++    KCG +  AR LFD++P +D  SW
Sbjct: 16  CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSW 75

Query: 528 TIMIAGYGMHG-----------------------------FGCD--AIATFNDMRQAGIE 556
             MI  Y   G                             +GCD  A+  F +M+  G  
Sbjct: 76  NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           P++ ++ SVL  CS   L+++G +  +    +   +        +VD+ ++   + EA  
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKG-KQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEY 194

Query: 617 FIEMMPVAPDATIWGSLLCG 636
             E+ P   +  +W +++ G
Sbjct: 195 LFELAPDKRNHVLWTAMVTG 214


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/812 (32%), Positives = 425/812 (52%), Gaps = 47/812 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS---EKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            +NA +G +   G   K    L++    E  K +  T+ ++L    D  +L  GK +HS 
Sbjct: 126 TWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSC 185

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           + ES   +D  V  + LV  +  CG L + R+VF+ +    V  WN ++  YS +    E
Sbjct: 186 VRESEHSLDVFV-NTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGE 244

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKC--------------------------------LA 209
           + ++F++MQ  G   D  TF  +L                                  + 
Sbjct: 245 AFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALIT 304

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           +    R  +DA ++F  +   ++++W+ +I+ +  +G   + L  F+ M   G   +  T
Sbjct: 305 MYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVT 364

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            +++L+G      L     +H    +       +  N L+++Y +C   D A  VF+++ 
Sbjct: 365 FISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLE 424

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
             +++SW SMI  Y +    D A++LFR M ++GI+PD     +IL AC         K 
Sbjct: 425 LPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKL 484

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           VH  ++E+ +  S  V  +L++MYAK G +  AE +  +M  + I +WN +I        
Sbjct: 485 VHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGR 544

Query: 443 ---ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              AL+ +  + L+    D VT   +L AC S  +L  G+ IH   +  G+ +D  V NA
Sbjct: 545 SREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNA 604

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           + +MY KCG +  AR +FD +P +  +SW  M+  Y  HG   + +     M Q G++ +
Sbjct: 605 LTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLN 664

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            ++F+SVL +CSH+GL+ EG ++F+ + ++  IE K EHY C+VDLL R G L EA ++I
Sbjct: 665 GITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYI 724

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
             MP+ P    W SLL  CR+  ++   +  A  + EL+P N+   V+L+N+Y+E   W+
Sbjct: 725 SKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWK 784

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
              KLR  ++ R +KK PG S I++K KV+ F    +SHP A +I   ++ L   M+  G
Sbjct: 785 NAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAG 844

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
           Y P T+  L + DE +KE  L  HSEKLA+AFG+++ P   ++ + KNLRVC DCH   K
Sbjct: 845 YVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATK 904

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           F+SK   REIV+RD++RFHHF+DG CSC+ +W
Sbjct: 905 FISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 173/642 (26%), Positives = 311/642 (48%), Gaps = 54/642 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  +    + ++A+ + ++   E    +  T  ++L  C   + L DG  VH++ 
Sbjct: 25  SWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALS 84

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG-NFKE 181
            E G    + ++ + L+ M+  CG L + + VF ++    V  WN ++  YS  G  +K 
Sbjct: 85  LERGF-FQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKL 143

Query: 182 SLYLFKKMQSLGIAADSYTF--------------------SCVLK---CLAVVGNSRRVK 218
           ++ LF +M   G+ A+  TF                    SCV +    L V  N+  V 
Sbjct: 144 AVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVN 203

Query: 219 ---------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                    DA K+FD +  R V +WN MIS Y  +  + +   +F+ M   G   D  T
Sbjct: 204 TYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVT 263

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            +++L  C N   L  G+ V     +  F  ++     L+ MY++C   + A +VF +M 
Sbjct: 264 FLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMK 323

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           + ++++W+++I  +A  G    A+R FR M +EGI P+     S+L+       LE    
Sbjct: 324 QTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSR 383

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H  I E+ +  +  + NAL+++Y +C S  DA +VF+Q+ + +++SWN+MIG       
Sbjct: 384 IHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCER 443

Query: 443 ---ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVAN 497
              AL LF  M Q   +PD V    IL AC ++ +  R R+ +H  +   G+     V  
Sbjct: 444 HDDALQLFRTMQQQGIQPDRVNFMTILGAC-TIGSHGRTRKLVHQCVEESGLGGSPLVQT 502

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           ++V+MY K G L +A  +   +  + + +W ++I GY +HG   +A+  +  ++   I  
Sbjct: 503 SLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPV 562

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           D+V+FISVL AC+ S  + EG +  +    EC ++  +     + ++ S+ G++  A R 
Sbjct: 563 DKVTFISVLNACTSSTSLAEG-KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 621

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
            + MP+   A  W  +L     H E   +E+V + + ++E +
Sbjct: 622 FDSMPIR-SAVSWNGMLQAYAQHGE---SEEVLKLIRKMEQE 659



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 160/544 (29%), Positives = 254/544 (46%), Gaps = 46/544 (8%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+  CG L +    F KI    V  WN+++  YS   +F+E+L LF  M   G+A ++ T
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 201 FSCVLKC--------------------------------LAVVGNSRRVKDAHKLFDELS 228
              VL                                  L + G    + DA  +F+E++
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 229 DRDVVSWNCMISGYIANGVAEK-GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
           +++VV+WN M+  Y   G   K  +E+F  ML  G   ++ T + VL+   +  AL  G+
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            +H+   ++  S ++  N  L++ Y+KCG L  A +VF+ M  RSV +W SMI+ Y+   
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
               A  +F+ M +EG   D     SIL AC     L+ GK V + I E   +  L+V  
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEP 456
           AL+ MYA+C S  DA  VF +M   ++++W+ +I           AL  F  M Q    P
Sbjct: 301 ALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILP 360

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           + VT   +L    + + LE    IH  I  HG+     + NA+V++Y +C     AR++F
Sbjct: 361 NRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVF 420

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           D +   +LISW  MI  Y       DA+  F  M+Q GI+PD V+F+++L AC+  G   
Sbjct: 421 DQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-IGSHG 479

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
              +  +    E  +         +V++ ++ G L  A   ++ M      T W  L+ G
Sbjct: 480 RTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVLING 538

Query: 637 CRIH 640
             +H
Sbjct: 539 YALH 542



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 235/466 (50%), Gaps = 20/466 (4%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           DA   F ++  R+VVSWN MIS Y +    ++ L +F  ML  G   +  T+V VL+ C 
Sbjct: 10  DAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCG 69

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
           +   L  G  VHA +L+  F +       LL+MY KCG L  A  VFE+M E++VV+W +
Sbjct: 70  SFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNA 129

Query: 339 MIAGYAREG-VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           M+  Y+ +G  +  A+ LF  M+ EG++ +V    ++L++      L  GK +H  ++E+
Sbjct: 130 MLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRES 189

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD----------LF 447
           +    ++V+ AL++ Y KCGS+ DA  VF+ MP + + +WN+MI A            +F
Sbjct: 190 EHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIF 249

Query: 448 VAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M Q  E  D VT   IL AC +   L+ G+ +   I       D  V  A++ MY +C
Sbjct: 250 QRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARC 309

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
                A  +F  +   +LI+W+ +I  +  HG   +A+  F  M+Q GI P+ V+FIS+L
Sbjct: 310 RSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLL 369

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
              +    ++E  R  +++  E  ++        +V++  R  +  +A    + + + P+
Sbjct: 370 NGFTTPSGLEELSR-IHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLEL-PN 427

Query: 627 ATIWGSLL---CGCRIHHE-VKLAEKVAEHVFELEPDNTGYYVLLA 668
              W S++     C  H + ++L   + +    ++PD   +  +L 
Sbjct: 428 LISWNSMIGIYVQCERHDDALQLFRTMQQQ--GIQPDRVNFMTILG 471


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 270/788 (34%), Positives = 421/788 (53%), Gaps = 93/788 (11%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           ++ S  S  +  T+C +++ C  L   E   ++  +  +     D  V  + LV MFV C
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDV-ETALVDMFVRC 186

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G +    R+F++I+   +F  N ++  Y+K       LY                     
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAK-------LY--------------------- 218

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                      +  A + F+++++RDVVSWN MI+    +G   + L +  EM   G  +
Sbjct: 219 ----------GIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRL 268

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T  + L+ CA   +L +G+ +HA  +++    +    + L+++Y+KCG    A RVF
Sbjct: 269 DSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVF 328

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
             + +R+ VSWT +I G  +   F  ++ LF  M  E +  D +A+ +++  C     L 
Sbjct: 329 NSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLC 388

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-- 443
           +G+ +H    ++    ++ VSN+L+ +YAKCG + +AE VF+ M  +DIVSW +MI A  
Sbjct: 389 LGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYS 448

Query: 444 ---------------------------------------LDLFVAML--QNFEPDGVTMA 462
                                                  L ++ AML  ++  PD VT  
Sbjct: 449 QIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYV 508

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            +   CA + A + G +I G+ ++ G+  + +VANA + MY KCG +  A+ LFD++  K
Sbjct: 509 TLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK 568

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           D++SW  MI GY  HG G  A  TF+DM   G +PD +S+++VL  CSHSGLV EG  +F
Sbjct: 569 DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYF 628

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
           +MM     I P LEH++CMVDLL R G+L+EA   I+ MP+ P A +WG+LL  C+IH  
Sbjct: 629 DMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGN 688

Query: 643 VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIE 702
            +LAE  A+HVFEL+  ++G Y+LLA +Y++A K ++  ++R+ +  +G+KKNPG SW+E
Sbjct: 689 DELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWME 748

Query: 703 IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGH 762
           ++ KV++F A   SHP    I + L  L  ++   GY        +  +    E+    H
Sbjct: 749 VENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGY--------VRTESPRSEIH---H 797

Query: 763 SEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
           SEKLA+AFGI++LPA   I + KNLR+CGDCH + K +S    RE V+RD  RFHHFK G
Sbjct: 798 SEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSG 857

Query: 823 RCSCRGFW 830
            CSC  +W
Sbjct: 858 SCSCGDYW 865



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 161/651 (24%), Positives = 263/651 (40%), Gaps = 119/651 (18%)

Query: 96  TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVF 155
           T+     L+ C    +L   + +H  +   G+      L + L+  + +CG L + RR+ 
Sbjct: 4   TQALADALRSCGSRGALAGARALHGRLVTVGLA-SAVFLQNTLLHAYFSCGALSDARRLL 62

Query: 156 N-KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
              I    V   N++M+ Y+K G+                                    
Sbjct: 63  RADIKEPNVITHNIMMNGYAKQGS------------------------------------ 86

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA-TMVTV 273
             + DA +LFD +  RDV SWN ++SGY        GLE F  M   G ++  A T   V
Sbjct: 87  --LSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCV 144

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG----------------- 316
           +  C   G       +     K  F  +      L+DM+ +CG                 
Sbjct: 145 MKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTI 204

Query: 317 --------------DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
                          +D AI  FE M ER VVSW  MIA  ++ G    A+ L   M R+
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G+  D    TS L ACA    L  GK +H  +  +  Q   YV++AL+++YAKCGS  +A
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASL 471
           + VFN +  ++ VSW  +IG          +++LF  M       D   +A ++  C + 
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNR 384

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
             L  GR++H   L+ G +    V+N+++ +Y KCG L  A  +F  +  +D++SWT MI
Sbjct: 385 MDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMI 444

Query: 532 AGY--------------GM-----------------HGFGCDAIATFNDM-RQAGIEPDE 559
             Y              GM                 HG   D +  ++ M  Q  + PD 
Sbjct: 445 TAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDW 504

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+++++   C+  G    G +       +  +   +      + + S+ G +SEA +  +
Sbjct: 505 VTYVTLFRGCADIGANKLGDQIIGHT-VKAGLILNVSVANAAITMYSKCGRISEAQKLFD 563

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
           ++    D   W +++ G   H   K A K  + +     +PD   Y  +L+
Sbjct: 564 LLN-GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLS 613



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 209/447 (46%), Gaps = 69/447 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I    + G + +A+ ++    +   ++D+ TY S L  CA L SL  GK++H+ +
Sbjct: 237 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 296

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             S   ID  V  S L+ ++  CG  KE +RVFN + +     W +L+    +   F +S
Sbjct: 297 IRSLPQIDPYV-ASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKS 355

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK--------CLA----------------VVGNSR--- 215
           + LF +M++  +A D +  + ++         CL                 VV NS    
Sbjct: 356 VELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISL 415

Query: 216 -----RVKDAHKLFDELSDRDVVS-------------------------------WNCMI 239
                 +++A  +F  +S+RD+VS                               WN M+
Sbjct: 416 YAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAML 475

Query: 240 SGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
             YI +G  E GL+++  ML+      D  T VT+  GCA+ GA   G  +    +KA  
Sbjct: 476 GAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGL 535

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
              +S  N  + MYSKCG +  A ++F+ +  + VVSW +MI GY++ G+   A + F  
Sbjct: 536 ILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDD 595

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCG 417
           M+ +G +PD  +  ++L  C+  GL++ GK   D + + + +   L   + ++D+  + G
Sbjct: 596 MLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAG 655

Query: 418 SMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +A+ + ++MP+K     W  ++ A
Sbjct: 656 HLTEAKDLIDKMPMKPTAEVWGALLSA 682


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/786 (34%), Positives = 428/786 (54%), Gaps = 51/786 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  TY  +++ CA +  +  G  VH ++ ++G+V +D  +G+ LV  + T G + +  ++
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLV-EDVFVGNALVSFYGTHGFVTDALQL 244

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYTFSCVLKCLAVVGN 213
           F+ +    +  WN ++  +S  G  +ES  L  +M +  G  A     + ++  L V   
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304

Query: 214 SRRV-----------------------------------KDAHKLFDELSDRDVVSWNCM 238
            R +                                    +A  +F   ++++VVSWN M
Sbjct: 305 EREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 364

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFALKA 296
           + G+ A G      +V ++ML  G +V  D  T++  +  C +   L   + +H ++LK 
Sbjct: 365 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 424

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            F       N  +  Y+KCG L  A RVF  +  ++V SW ++I G+A+      ++   
Sbjct: 425 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 484

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M   G+ PD + + S+L AC+    L +GK+VH +I  N ++  L+V  +++ +Y  C
Sbjct: 485 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 544

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACIL 465
           G +   +++F+ M  K +VSWNT+I           AL +F  M L   +  G++M  + 
Sbjct: 545 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 604

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
            AC+ L +L  GRE H Y L+H +  D  +A +++DMY K G +  +  +F+ +  K   
Sbjct: 605 GACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 664

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           SW  MI GYG+HG   +AI  F +M++ G  PD+++F+ VL AC+HSGL+ EG R+ + M
Sbjct: 665 SWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQM 724

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI-EMMPVAPDATIWGSLLCGCRIHHEVK 644
           +    ++P L+HYAC++D+L R G L +A R + E M    D  IW SLL  CRIH  ++
Sbjct: 725 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 784

Query: 645 LAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIK 704
           + EKVA  +FELEP+    YVLL+N+YA   KWE+V+K+R++++   L+K+ GCSWIE+ 
Sbjct: 785 MGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 844

Query: 705 GKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSE 764
            KV  FV G       ++I+SL   L +++ + GY P T     +  E EK   L GHSE
Sbjct: 845 RKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSE 904

Query: 765 KLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRC 824
           KLA+ +G++    G TIRV KNLR+C DCH  AK +SK   REIV+RD+ RFHHFK+G C
Sbjct: 905 KLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVC 964

Query: 825 SCRGFW 830
           SC  +W
Sbjct: 965 SCGDYW 970



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 200/692 (28%), Positives = 342/692 (49%), Gaps = 74/692 (10%)

Query: 70  IGRFCEVGNLEKAMEVLY--------SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           I  FCE G+L+K+   +         SS+   +  +    +LQ     K +E G+K+H +
Sbjct: 50  ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +  S  + +D VL ++++ M+  CG   + R VF+ + +  +F WN ++  YS+   + E
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169

Query: 182 SLYLFKKM-QSLGIAADSYTFSCVLKC----------LAV--------------VGNSRR 216
            L  F +M  +  +  D +T+ CV+K           LAV              VGN+  
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALV 229

Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML----NLGFN 264
                   V DA +LFD + +R++VSWN MI  +  NG +E+   +  EM+    +  F 
Sbjct: 230 SFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 289

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D+AT+VTVL  CA    +  G+ VH +A+K    KE+  NN L+DMYSKCG +  A  +
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR--EGIEPDVYAITSILHACACDG 382
           F+    ++VVSW +M+ G++ EG   G   + R M+   E ++ D   I + +  C  + 
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 409

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
            L   K++H Y  + +   +  V+NA +  YAKCGS++ A+ VF+ +  K + SWN +IG
Sbjct: 410 FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469

Query: 443 ----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                     +LD  + M +    PD  T+  +L AC+ L +L  G+E+HG+I+R+ +  
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D  V  +++ +Y+ CG L   ++LFD +  K L+SW  +I GY  +GF   A+  F  M 
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589

Query: 552 QAGIEPDEVSFISVLYACS-----HSGLVDEGWRFFNMMRYECNIEPKLEHYAC-MVDLL 605
             GI+   +S + V  ACS       G     +   +++  +  I       AC ++D+ 
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI-------ACSLIDMY 642

Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDNTGY 663
           ++ G+++++ +    +     A+ W +++ G  IH   K A K+ E +      PD+  +
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF 701

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
             +L          E ++ L +  S  GLK N
Sbjct: 702 LGVLTACNHSGLIHEGLRYLDQMKSSFGLKPN 733



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 40/418 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS----SEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++N  +G F   G+     +VL       E  K D  T  + + +C     L   K++H 
Sbjct: 360 SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 419

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              +   V ++ ++ +  V  +  CG L   +RVF+ I +  V  WN L+  ++++ + +
Sbjct: 420 YSLKQEFVYNE-LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 478

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------- 221
            SL    +M+  G+  DS+T   +L   + + + R  K+ H                   
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 538

Query: 222 -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                         LFD + D+ +VSWN +I+GY+ NG  ++ L VF++M+  G  +   
Sbjct: 539 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 598

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           +M+ V   C+   +L  GR  HA+ALK     +     +L+DMY+K G +  + +VF  +
Sbjct: 599 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 658

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            E+S  SW +MI GY   G+   AI+LF  M R G  PD      +L AC   GL+  G 
Sbjct: 659 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 718

Query: 389 DVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK--DIVSWNTMIGA 443
              D +K +  ++ +L     ++DM  + G +  A  V  +   +  D+  W +++ +
Sbjct: 719 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 776



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 27/300 (9%)

Query: 46  CTINPI-SASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEV-----LYSSEKSKIDTKTY 99
           CT+  +  A   K+LV    ++N  I  + + G  ++A+ V     LY  +   I   + 
Sbjct: 548 CTVQALFDAMEDKSLV----SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI---SM 600

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
             +   C+ L SL  G++ H+   +  ++ DD  +   L+ M+   G + +  +VFN + 
Sbjct: 601 MPVFGACSLLPSLRLGREAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK 659

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
                 WN ++  Y   G  KE++ LF++MQ  G   D  TF   L  L    +S  + +
Sbjct: 660 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF---LGVLTACNHSGLIHE 716

Query: 220 AHKLFDELSDR-----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             +  D++        ++  + C+I      G  +K L V  E   +    D+    ++L
Sbjct: 717 GLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE--EMSEEADVGIWKSLL 774

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSV 333
           S C     L  G  V A   +     E   N  LL ++Y+  G  +   +V ++M E S+
Sbjct: 775 SSCRIHQNLEMGEKVAAKLFE--LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSL 832


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 272/781 (34%), Positives = 425/781 (54%), Gaps = 47/781 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSE--KSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +++A I  + + G  E+A+   Y      +K +  T+ S+L+ C+  ++LE GK++H + 
Sbjct: 115 SWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVA 174

Query: 123 CESGIVIDDGVLGSKLVFMFV--TCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
             + + I  G+  ++     V   C  L++               + + +H Y       
Sbjct: 175 LVTEM-ISTGISPNEFSLSTVLNACAGLEDEN-------------YGMKVHGY------- 213

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                   +  LG  +D ++ + +L   A  G     + A  +F E+   D+VSWN +I+
Sbjct: 214 --------LIKLGYDSDPFSANALLDMYAKSGCP---EAAIAVFYEIPKPDIVSWNAVIA 262

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G + +   +  L++  +M +      + T+ + L  CA  G +  GR +H+  +K     
Sbjct: 263 GCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEP 322

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           +      L+DMYSKCG L  A  VF+ M  + V+ W S+I+GY+  G    A+ LF  M 
Sbjct: 323 DSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMY 382

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           +EG+E +   +++IL + A        + VH    ++  Q   YV+N+L+D Y KC  + 
Sbjct: 383 KEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLE 442

Query: 421 DAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNFEPDGVTMACILPACA 469
           DA  VF   P +D+V++ +MI A          L +++ M  ++ +PD    + +  ACA
Sbjct: 443 DAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACA 502

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           +L+A E+G++IH ++L+ G+ +D    N++V+MY KCG +  A  +F+ I  + ++SW+ 
Sbjct: 503 NLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSA 562

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           MI G   HG G  A+  F  M + GI P+ ++ +SVL AC+H+GLV E  RFF +M    
Sbjct: 563 MIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLF 622

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            I P  EHYACMVD+L R G L EA   ++ MP    A +WG+LL   RIH  ++L    
Sbjct: 623 GITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHA 682

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           AE +  LEP+ +G ++LLAN+YA    W+ V K+R  +    +KK PG SWIE+K KV  
Sbjct: 683 AEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYT 742

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F+ G  SHP +K+I   L  LR  +   GY P     L + +++EKE  L  HSEKLA+A
Sbjct: 743 FIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVA 802

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           FG++  P G  IRV KNLRVC DCH   KF+SK A REI++RD NRFHHF+DG CSC  +
Sbjct: 803 FGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDY 862

Query: 830 W 830
           W
Sbjct: 863 W 863



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 226/446 (50%), Gaps = 52/446 (11%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF---------------- 263
           A KL  + S+ D+VSW+ +ISGY+ NG  E+ L  + EM  LG                 
Sbjct: 101 ARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSL 160

Query: 264 --NVDLATMV----------------------TVLSGCANCGALMFGRAVHAFALKACFS 299
             N++L   +                      TVL+ CA      +G  VH + +K  + 
Sbjct: 161 TRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYD 220

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +    N LLDMY+K G  + AI VF ++ +  +VSW ++IAG       D A++L   M
Sbjct: 221 SDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKM 280

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
               + P ++ ++S L ACA  GL+++G+ +H  + + DM+   +V   L+DMY+KCG +
Sbjct: 281 GSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLL 340

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPAC 468
            DA  VF+ MP KD++ WN++I           A+ LF  M  +  E +  T++ IL + 
Sbjct: 341 QDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKST 400

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A   A     ++H   ++ G   D  VAN+++D Y KC +L  A  +F++ PA+DL+++T
Sbjct: 401 AGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYT 460

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI  Y  +G G +A+  +  M+   I+PD   F S+  AC++    ++G +  ++   +
Sbjct: 461 SMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQG-KQIHVHVLK 519

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEA 614
           C +   +     +V++ ++ G++ +A
Sbjct: 520 CGLLSDVFAGNSLVNMYAKCGSIDDA 545



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 18/279 (6%)

Query: 60  VCKTKN---YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLED 114
           VC  ++   Y + I  + + G  E+A+++    +   I  D   + S+   CA+L + E 
Sbjct: 450 VCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQ 509

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           GK++H  + + G+ + D   G+ LV M+  CG + +   +FN+I    +  W+ ++   +
Sbjct: 510 GKQIHVHVLKCGL-LSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLA 568

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRRVKD-AHKLFDELSDR 230
           + G+ +++L LF +M   GI  +  T   VL       +V  +RR      KLF     +
Sbjct: 569 QHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQ 628

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           +   + CM+      G  ++ + + KEM    F    A    +L        +  GR  H
Sbjct: 629 E--HYACMVDILGRVGRLDEAMVLVKEM---PFQASAAVWGALLGAARIHKNIELGR--H 681

Query: 291 AFALKACFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKM 328
           A  +      E S  + LL ++Y+  G  D   +V   M
Sbjct: 682 AAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSM 720


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/637 (39%), Positives = 377/637 (59%), Gaps = 16/637 (2%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           + + ++    R+K+A ++  ++       ++ +I   I + + ++G +V + +   GF  
Sbjct: 44  EAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVP 103

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
            L  +  +L   A C +LM  + +          +++   N L+  Y+K G L  A  +F
Sbjct: 104 GLFILNRLLEMYAKCDSLMDSQKL----FDEMPERDLCSWNILISGYAKMGLLQEAKSLF 159

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDGLL 384
           +KM ER   SWT+MI+GY R    + A+ LFR M R +  + + + ++S L A A    L
Sbjct: 160 DKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCL 219

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
            IGK++H YI    + S   V +AL DMY KCGS+ +A  +F++M  +DIV+W  MI   
Sbjct: 220 RIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRY 279

Query: 443 --------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                     DLF  +L++   P+  T + +L ACA+  + E G+++HGY+ R G     
Sbjct: 280 FQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFS 339

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
             A+A+V MY KCG +V A  +F   P  DL SWT +IAGY  +G   +AI  F  + ++
Sbjct: 340 FAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKS 399

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G +PD ++F+ VL AC+H+GLVD+G  +F+ ++ +  +    +HYAC++DLL+R+G   E
Sbjct: 400 GTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDE 459

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A   I  M + PD  +W SLL GCRIH  +KLA++ AE +FE+EP+N   YV LAN+YA 
Sbjct: 460 AENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYAT 519

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
           A  W EV K+R+ +  RG+ K PG SWI IK  V++F+ G  SHP +K+I   L +L   
Sbjct: 520 AGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKR 579

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           MK EG+ P T + L + ++ +KE  L  HSEKLA+AFGI++ P G  I+V KNLR C DC
Sbjct: 580 MKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDC 639

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H   KF+SK   R+I++RDSNRFH F+DG CSCR +W
Sbjct: 640 HTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 247/518 (47%), Gaps = 62/518 (11%)

Query: 42  SHSSCTINPI----SASISKTLV---CKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI 94
           SHSS    P     S +   TLV   C  K ++  I   C+   L++A+++L+  +K   
Sbjct: 11  SHSSSPFQPKTFFKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQIDKPS- 69

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
               Y +++Q C   + L+ GKKVH  I  SG V    +L ++L+ M+  C  L + +++
Sbjct: 70  -ASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFIL-NRLLEMYAKCDSLMDSQKL 127

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+++    +  WN+L+  Y+K G  +E+  LF KM                         
Sbjct: 128 FDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKM------------------------- 162

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTV 273
                         +RD  SW  MISGY+ +    + LE+F+ M  +     +  T+ + 
Sbjct: 163 -------------PERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSA 209

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L+  A    L  G+ +H + ++     +    + L DMY KCG ++ A  +F+KM +R +
Sbjct: 210 LAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDI 269

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           V+WT+MI  Y ++G       LF  ++R GI P+ +  + +L+ACA     E+GK VH Y
Sbjct: 270 VTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGY 329

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           +         + ++AL+ MY+KCG+M  AE VF + P  D+ SW ++I           A
Sbjct: 330 MTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEA 389

Query: 444 LDLFVAMLQN-FEPDGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVD 501
           +  F  ++++  +PD +T   +L ACA    +++G +  H    ++G++   +    I+D
Sbjct: 390 IRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIID 449

Query: 502 MYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
           +  + G    A ++   +  K D   W  ++ G  +HG
Sbjct: 450 LLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHG 487



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 147/353 (41%), Gaps = 39/353 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++ A I  +       +A+E+   +  S+ SK +  T  S L   A +  L  GK++H  
Sbjct: 169 SWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGY 228

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I  +G+  D+ V+ S L  M+  CG ++E R +F+K+ +  +  W  ++  Y + G  KE
Sbjct: 229 IMRTGLDSDE-VVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKE 287

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLA----------VVGNSRRVK------------- 218
              LF  +   GI  + +TFS VL   A          V G   RV              
Sbjct: 288 GFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVH 347

Query: 219 ---------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                     A ++F E    D+ SW  +I+GY  NG  ++ +  F+ ++  G   D  T
Sbjct: 348 MYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHIT 407

Query: 270 MVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            V VLS CA+ G +  G    H+   +   +        ++D+ ++ G  D A  +  KM
Sbjct: 408 FVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKM 467

Query: 329 GER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACA 379
             +     W S++ G    G    A R    +   E   P  Y   + ++A A
Sbjct: 468 SMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATA 520


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 270/754 (35%), Positives = 428/754 (56%), Gaps = 50/754 (6%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  IG +   G    A+ + ++   E   +   ++ ++L+ CA L+ +  G ++HS++ 
Sbjct: 113 WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV 172

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFIWNLLMHEYSKTGNFKES 182
           + G     G + + LV M+    DL   RR+F+   + G   +WN ++  YS +G   E+
Sbjct: 173 KLGYH-STGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 231

Query: 183 LYLFKKMQSLGIAADSYTF--------------------SCVLK----------CLAVVG 212
           L LF++M   G A +SYT                     + VLK          C A++ 
Sbjct: 232 LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIA 291

Query: 213 NSRR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
              R   +  A ++  ++++ DVV+WN +I GY+ N + ++ LE F +M+  G   D  +
Sbjct: 292 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 351

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           M ++++       L+ G  +HA+ +K  +   +   NTL+DMYSKC       R F +M 
Sbjct: 352 MTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH 411

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ++ ++SWT++IAGYA+      A+ LFR + ++ +E D   + SIL A +    + I K+
Sbjct: 412 DKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKE 471

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H +I    +  ++ + N L+D+Y KC +M  A  VF  +  KD+VSW +MI        
Sbjct: 472 IHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGN 530

Query: 443 ---ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              A++LF  M++     D V + CIL A ASL+AL +GREIH Y+LR G   + ++A A
Sbjct: 531 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA 590

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +VDMY  CG L  A+++FD I  K L+ +T MI  YGMHG G  A+  F+ MR   + PD
Sbjct: 591 VVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPD 650

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            +SF+++LYACSH+GL+DEG  F  +M +E  +EP  EHY C+VD+L R   + EA+ F+
Sbjct: 651 HISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV 710

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           +MM   P A +W +LL  CR H E ++ E  A+ + ELEP N G  VL++NV+AE  +W 
Sbjct: 711 KMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 770

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE- 737
           +V+K+R K+   G++K+PGCSWIE+ GKV+ F A   SHP +K+I   L  +  +++RE 
Sbjct: 771 DVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREV 830

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFG 771
           GY   T++ L N DE EK   L GHSE++A+A+G
Sbjct: 831 GYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYG 864



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 200/399 (50%), Gaps = 14/399 (3%)

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
           L +  Q L ++ ++         L + G  RR     K+FDE+ DR   +WN MI  Y++
Sbjct: 64  LTEAFQRLDVSENNSPVEAFAYVLELCGK-RRAVSQEKVFDEMPDRTAFAWNTMIGAYVS 122

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           NG     L ++  M   G  + L++   +L  CA    +  G  +H+  +K  +      
Sbjct: 123 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 182

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
            N L+ MY+K  DL  A R+F+   E+   V W S+++ Y+  G     + LFR M   G
Sbjct: 183 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 242

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVH-DYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
             P+ Y I S L AC      ++GK++H   +K +   S LYV NAL+ MY +CG M  A
Sbjct: 243 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQA 302

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASL 471
           E +  QM   D+V+WN++I           AL+ F  M+    + D V+M  I+ A   L
Sbjct: 303 ERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRL 362

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           + L  G E+H Y+++HG  ++  V N ++DMY KC +       F  +  KDLISWT +I
Sbjct: 363 SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVI 422

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
           AGY  +    +A+  F D+ +  +E DE+   S+L A S
Sbjct: 423 AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 461


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 285/801 (35%), Positives = 427/801 (53%), Gaps = 62/801 (7%)

Query: 85  VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT 144
           +L +S+    D  T    L+ C      +DG++VH++  + G+   D  +G+ LV M+  
Sbjct: 56  LLAASDGVAPDRFTLPPALKSCRG----DDGRQVHAVAAKLGLADGDPFVGNSLVSMYGR 111

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK-MQSLG--IAADSYTF 201
           CG + +  +VF  +    +  WN LM   +   + +  L LF+  ++ LG   A D  T 
Sbjct: 112 CGRVDDAEKVFEGMAGRNLVSWNALM---AAVADPRRGLELFRDCLEDLGGTAAPDEATL 168

Query: 202 SCVLKCLAVVGNSRRVKDAHKLF----------------------DELSD---------- 229
             VL   A +      +  H L                        E++D          
Sbjct: 169 VTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPP 228

Query: 230 ---RDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSGCANCGALM 284
              R+VVSWN M+ GY  NG A     + +EM     G   D  TM++VL  C+    L 
Sbjct: 229 GAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELA 288

Query: 285 FGRAVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             R +HAF ++           N L+  Y +CG L  A RVF+ +  + V SW ++I  +
Sbjct: 289 KLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAH 348

Query: 344 AREGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           A+ G    AI LFR M    G +PD ++I S+L AC     L  GK  H +I  N ++  
Sbjct: 349 AQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKD 408

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ 452
            ++  +L+ +Y +CG  + A  +F+ +  KD VSWNTMI           +L LF  M  
Sbjct: 409 SFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQS 468

Query: 453 ---NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
                 P  +     L AC+ L A+  G+E+H + L+  +  D  ++++I+DMY KCG +
Sbjct: 469 KKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSV 528

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             AR  FD + AKD +SWT+MI GY ++G G +A+  ++ M + G+EPD  +++ +L AC
Sbjct: 529 DDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMAC 588

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
            H+G++++G  FF  MR    IE KLEHYAC++ +LSR G  ++A   +E+MP  PDA I
Sbjct: 589 GHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKI 648

Query: 630 WGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISR 689
             S+L  C +H EV+L +KVA+ + ELEP    +YVL +N+YA + +W+E++K+R+ +  
Sbjct: 649 LSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRD 708

Query: 690 RGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALIN 749
            G+ K PGCSWI+I GKV  FVAG +S P   K+  +   L  +++  GY P T   L  
Sbjct: 709 AGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHE 768

Query: 750 ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIV 809
            +E EK  AL  HSEK A+AFG+L       +RV KN+R+C DCH  AK +SK A REIV
Sbjct: 769 LEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISKVADREIV 828

Query: 810 LRDSNRFHHFKDGRCSCRGFW 830
           +RD  RFHHF+DG CSC  +W
Sbjct: 829 VRDKKRFHHFRDGLCSCGDYW 849



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 178/364 (48%), Gaps = 35/364 (9%)

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNL--GFNVDLATMVTVLSGCANCGALMFGRAVHA 291
            WN +++     G     L +   +L    G   D  T+   L  C        GR VHA
Sbjct: 32  QWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDD----GRQVHA 87

Query: 292 FALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA--REGV 348
            A K   +    F  N+L+ MY +CG +D A +VFE M  R++VSW +++A  A  R G 
Sbjct: 88  VAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRG- 146

Query: 349 FDGAIRLFRGMVRE---GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
               + LFR  + +      PD   + ++L  CA     E G+ VH    ++   ++  V
Sbjct: 147 ----LELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRV 202

Query: 406 SNALMDMYAKCGSMADAESVFNQMPV---KDIVSWNTMIG----------ALDLFVAML- 451
           SN L+DMYAKCG MADAE  F + P    +++VSWN M+G          A  L   M  
Sbjct: 203 SNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQM 262

Query: 452 --QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN-VANAIVDMYVKCGV 508
             +    D +TM  +LP C+ L  L + RE+H +++R G+    + V NA++  Y +CG 
Sbjct: 263 EERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGC 322

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA-GIEPDEVSFISVLY 567
           L+ A  +FD I +K + SW  +I  +  +G    AI  F +M  A G +PD  S  S+L 
Sbjct: 323 LLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLL 382

Query: 568 ACSH 571
           AC +
Sbjct: 383 ACGN 386



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 211/461 (45%), Gaps = 63/461 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSK----IDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++N  +G +   G    A  +L   +  +     D  T  S+L +C+ L  L   +++H+
Sbjct: 236 SWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHA 295

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            +   G+ +   ++ + L+  +  CG L    RVF+ I +  V  WN L+  +++ G   
Sbjct: 296 FVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEAS 355

Query: 181 ESLYLFKKM-QSLGIAADSYTF-SCVLKC------------------------------- 207
            ++ LF++M  + G   D ++  S +L C                               
Sbjct: 356 AAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSL 415

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL--GFNV 265
           L+V     R   A  LFD + ++D VSWN MI+GY  NG+  + L++F+EM +   G   
Sbjct: 416 LSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWP 475

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
            L    + L  C+   A+  G+ +H FALKA   ++   +++++DMYSKCG +D A   F
Sbjct: 476 SLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFF 535

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           +++  +  VSWT MI GYA  G    A+ L+  M REG+EPD +    +L AC   G+LE
Sbjct: 536 DRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLE 595

Query: 386 IGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL 444
            G      ++    +++ L     ++ M ++ G  ADA ++   MP              
Sbjct: 596 DGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPE------------- 642

Query: 445 DLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYIL 485
                     EPD   ++ +L AC     +E G+++   +L
Sbjct: 643 ----------EPDAKILSSVLSACHMHGEVELGKKVADKLL 673



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 133/258 (51%), Gaps = 23/258 (8%)

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMV--REGIEPDVYAITSILHACACDGLLEIGKD 389
           S+  W  ++A  +R G    A+ +   ++   +G+ PD + +   L +C  D     G+ 
Sbjct: 29  SLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDD----GRQ 84

Query: 390 VHDYIKENDM-QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----- 443
           VH    +  +     +V N+L+ MY +CG + DAE VF  M  +++VSWN ++ A     
Sbjct: 85  VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPR 144

Query: 444 --LDLFVAMLQNF----EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
             L+LF   L++      PD  T+  +LP CA+LA  E GR +HG  ++ G  A   V+N
Sbjct: 145 RGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSN 204

Query: 498 AIVDMYVKCGVLVLARSLFDMIP---AKDLISWTIMIAGYGMHGFGCDAIATFNDMR--Q 552
            +VDMY KCG +  A   F   P    ++++SW +M+ GY  +G    A     +M+  +
Sbjct: 205 VLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEE 264

Query: 553 AGIEPDEVSFISVLYACS 570
            G+  DE++ +SVL  CS
Sbjct: 265 RGVPADEITMLSVLPVCS 282


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/788 (34%), Positives = 421/788 (53%), Gaps = 93/788 (11%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           ++ S  S  +  T+C +++ C  L   E   ++  +  +     D  V  + LV MFV C
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDV-ETALVDMFVRC 186

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G +    R+F++I+   +F  N ++  Y+K       LY                     
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAK-------LY--------------------- 218

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                      +  A + F+++++RDVVSWN MI+    +G   + L +  EM   G  +
Sbjct: 219 ----------GIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRL 268

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T  + L+ CA   +L +G+ +HA  +++    +    + L+++Y+KCG    A RVF
Sbjct: 269 DSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVF 328

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
             + +R+ VSWT +I G  +   F  ++ LF  M  E +  D +A+ +++  C     L 
Sbjct: 329 NSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLC 388

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-- 443
           +G+ +H    ++    ++ VSN+L+ +YAKCG + +AE VF+ M  +DIVSW +MI A  
Sbjct: 389 LGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYS 448

Query: 444 ---------------------------------------LDLFVAML--QNFEPDGVTMA 462
                                                  L ++ AML  ++  PD VT  
Sbjct: 449 QIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYV 508

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            +   CA + A + G +I G+ ++ G+  + +VANA + MY KCG +  A+ LFD++  K
Sbjct: 509 TLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK 568

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           D++SW  MI GY  HG G  A  TF+DM   G +PD +S+++VL  CSHSGLV EG  +F
Sbjct: 569 DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYF 628

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
           +MM     I P LEH++CMVDLL R G+L+EA   I+ MP+ P A +WG+LL  C+IH  
Sbjct: 629 DMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGN 688

Query: 643 VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIE 702
            +LAE  A+HVFEL+  ++G Y+LLA +Y++A K ++  ++R+ +  +G+KKNPG SW+E
Sbjct: 689 DELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWME 748

Query: 703 IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGH 762
           ++ KV++F A   SHP    I + +  L  ++   GY        +  +    E+    H
Sbjct: 749 VENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGY--------VRTESPRSEIH---H 797

Query: 763 SEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
           SEKLA+AFGI++LPA   I + KNLR+CGDCH + K +S    RE V+RD  RFHHFK G
Sbjct: 798 SEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSG 857

Query: 823 RCSCRGFW 830
            CSC  +W
Sbjct: 858 SCSCGDYW 865



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 158/651 (24%), Positives = 262/651 (40%), Gaps = 119/651 (18%)

Query: 96  TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVF 155
           T+     L+ C    +L   + +H  +   G+      L + L+  +++CG L + RR+ 
Sbjct: 4   TQALADALRSCGSRGALAGARALHGRLVTVGLA-SAVFLQNTLLHAYLSCGALSDARRLL 62

Query: 156 N-KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
              I    V   N++M+ Y+K G+                                    
Sbjct: 63  RADIKEPNVITHNIMMNGYAKQGS------------------------------------ 86

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA-TMVTV 273
             + DA +LFD +  RDV SWN ++SGY        GLE F  M   G ++  A T   V
Sbjct: 87  --LSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCV 144

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG----------------- 316
           +  C   G       +     K  F  +      L+DM+ +CG                 
Sbjct: 145 MKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTI 204

Query: 317 --------------DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
                          +D AI  FE M ER VVSW  MIA  ++ G    A+ L   M R+
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G+  D    TS L ACA    L  GK +H  +  +  Q   YV++AL+++YAKCGS  +A
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASL 471
           + VFN +  ++ VSW  +IG          +++LF  M       D   +A ++  C + 
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNR 384

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL---------------------- 509
             L  GR++H   L+ G +    V+N+++ +Y KCG L                      
Sbjct: 385 MDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMI 444

Query: 510 ---------VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDE 559
                    + AR  FD +  ++ I+W  M+  Y  HG   D +  ++ M  Q  + PD 
Sbjct: 445 TAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDW 504

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+++++   C+  G    G +       +  +   +      + + S+ G +SEA +  +
Sbjct: 505 VTYVTLFRGCADIGANKLGDQIIGHT-VKAGLILNVSVANAAITMYSKCGRISEAQKLFD 563

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
           ++    D   W +++ G   H   K A K  + +     +PD   Y  +L+
Sbjct: 564 LLN-GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLS 613



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 209/447 (46%), Gaps = 69/447 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I    + G + +A+ ++    +   ++D+ TY S L  CA L SL  GK++H+ +
Sbjct: 237 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 296

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             S   ID  V  S L+ ++  CG  KE +RVFN + +     W +L+    +   F +S
Sbjct: 297 IRSLPQIDPYV-ASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKS 355

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK--------CLA----------------VVGNSR--- 215
           + LF +M++  +A D +  + ++         CL                 VV NS    
Sbjct: 356 VELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISL 415

Query: 216 -----RVKDAHKLFDELSDRDVVS-------------------------------WNCMI 239
                 +++A  +F  +S+RD+VS                               WN M+
Sbjct: 416 YAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAML 475

Query: 240 SGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
             YI +G  E GL+++  ML+      D  T VT+  GCA+ GA   G  +    +KA  
Sbjct: 476 GAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGL 535

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
              +S  N  + MYSKCG +  A ++F+ +  + VVSW +MI GY++ G+   A + F  
Sbjct: 536 ILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDD 595

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCG 417
           M+ +G +PD  +  ++L  C+  GL++ GK   D + + + +   L   + ++D+  + G
Sbjct: 596 MLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAG 655

Query: 418 SMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +A+ + ++MP+K     W  ++ A
Sbjct: 656 HLTEAKDLIDKMPMKPTAEVWGALLSA 682


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/679 (37%), Positives = 395/679 (58%), Gaps = 20/679 (2%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+   SK G F + L +     ++G   D    + ++    + G   RV  A  +FD + 
Sbjct: 10  LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLID---MYGKCSRVDLACSVFDRML 66

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           +R+VVSW  ++ GY+  G A+  L +  EM   G   +  T  T L  C   G +  G  
Sbjct: 67  ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H   +K+ F       N  +DMYSKCG +  A +VF KM  R++VSW +MIAG+  EG 
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL--YVS 406
              ++ LF+ M  +G  PD +  TS L AC   G +  G  +H  +       S+   ++
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIA 246

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP 456
           +A++D+YAKCG + +A+ VF+++  K+++SW+ +I           A+DLF  + ++   
Sbjct: 247 SAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSN 306

Query: 457 -DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
            DG  ++ ++   A LA +E+G+++H YIL+     D +VAN+I+DMY+KCG+   A  L
Sbjct: 307 VDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERL 366

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           F  +  ++++SWT+MI GYG HG G  AI  FN M+  GIE DEV+++++L ACSHSGL+
Sbjct: 367 FSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLI 426

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
            E   +F+ +     ++P +EHYACMVD+L R G L EA   IE M + P+  IW +LL 
Sbjct: 427 RESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLS 486

Query: 636 GCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
            CR+H  +++  +V E +F ++ DN   YV+++N+YAEA  W+E +++R+ +  +GLKK 
Sbjct: 487 ACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKE 546

Query: 696 PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE-GYFPKTRYALINADEME 754
            G SW+EI  +++ F  G  +HP  +KI  +LK +   +K E GY    R+AL + +E  
Sbjct: 547 AGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEES 606

Query: 755 KEVALCGHSEKLAMAFGIL---NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           KE  L  HSEKLA+   ++       G  IRV KNLRVCGDCHE  K +SK  ++  V+R
Sbjct: 607 KEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVR 666

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           D+NRFH F+DG CSC  +W
Sbjct: 667 DANRFHRFEDGLCSCGDYW 685



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 139/420 (33%), Positives = 213/420 (50%), Gaps = 29/420 (6%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +  +L  C+  G    G  VHA A+   F  ++  NN L+DMY KC  +D A  VF++M 
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ER+VVSWT+++ GY +EG   G++ L   M   G++P+ +  ++ L AC   G++E G  
Sbjct: 67  ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H    ++  +    V NA +DMY+KCG +  AE VFN+MP +++VSWN MI        
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186

Query: 443 ---ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHG--ISADRNVA 496
              +L LF  M    E PD  T    L AC +L A+  G +IH  ++  G  IS    +A
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIA 246

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           +AIVD+Y KCG L  A+ +FD I  K+LISW+ +I G+   G   +A+  F  +R++   
Sbjct: 247 SAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSN 306

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC--MVDLLSRTGNLSEA 614
            D      ++   +   LV++G +   M  Y   +   L+      ++D+  + G   EA
Sbjct: 307 VDGFVLSIMMGVFADLALVEQGKQ---MHCYILKVPSGLDISVANSIIDMYLKCGLTEEA 363

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE------LEPDNTGYYVLLA 668
            R    M V  +   W  ++ G   H    L EK A H+F       +E D   Y  LL+
Sbjct: 364 ERLFSEMQV-RNVVSWTVMITGYGKH---GLGEK-AIHLFNRMQLDGIELDEVAYLALLS 418



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 236/496 (47%), Gaps = 58/496 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           + +    +L+ C+     + G +VH+     G   D  ++ + L+ M+  C  +     V
Sbjct: 3   ERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDL-IMNNDLIDMYGKCSRVDLACSV 61

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------- 207
           F+++    V  W  LM  Y + GN K SL L  +M   G+  + +TFS  LK        
Sbjct: 62  FDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVV 121

Query: 208 -----------------LAVVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGY 242
                            ++VVGN+         R+  A ++F+++  R++VSWN MI+G+
Sbjct: 122 ENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGH 181

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
              G   K L +F+ M   G   D  T  + L  C   GA+  G  +HA  +   F   I
Sbjct: 182 THEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFP--I 239

Query: 303 SFNN----TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
           S  N     ++D+Y+KCG L  A +VF+++ +++++SW+++I G+A+EG    A+ LFR 
Sbjct: 240 SIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQ 299

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           +       D + ++ ++   A   L+E GK +H YI +      + V+N+++DMY KCG 
Sbjct: 300 LRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGL 359

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPA 467
             +AE +F++M V+++VSW  MI           A+ LF  M L   E D V    +L A
Sbjct: 360 TEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSA 419

Query: 468 CASLAALERGREIHGYILR----HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK- 522
           C+    +   RE   Y  R    H +  +      +VD+  + G L  A++L + +  K 
Sbjct: 420 CSHSGLI---RESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKP 476

Query: 523 DLISWTIMIAGYGMHG 538
           +   W  +++   +HG
Sbjct: 477 NEGIWQTLLSACRVHG 492



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 225/484 (46%), Gaps = 64/484 (13%)

Query: 77  GNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGS 136
           G+L    E+ YS  K   +  T+ + L+ C  L  +E+G ++H +  +SG      V+G+
Sbjct: 88  GSLALLCEMGYSGVKP--NEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVS-VVGN 144

Query: 137 KLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA 196
             + M+  CG +    +VFNK+    +  WN ++  ++  GN ++SL LF++MQ  G   
Sbjct: 145 ATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVP 204

Query: 197 DSYTFSCVLKCLAVVGNSR----------------------------------RVKDAHK 222
           D +TF+  LK    +G  R                                   + +A K
Sbjct: 205 DEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQK 264

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +FD +  ++++SW+ +I G+   G   + +++F+++     NVD   +  ++   A+   
Sbjct: 265 VFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLAL 324

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           +  G+ +H + LK     +IS  N+++DMY KCG  + A R+F +M  R+VVSWT MI G
Sbjct: 325 VEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITG 384

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQS 401
           Y + G+ + AI LF  M  +GIE D  A  ++L AC+  GL+   ++    +  N  M+ 
Sbjct: 385 YGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKP 444

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTM 461
           ++     ++D+  + G + +A+++   M +K                       P+    
Sbjct: 445 NIEHYACMVDILGRAGQLKEAKNLIENMKLK-----------------------PNEGIW 481

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIV-DMYVKCGVLVLARSLFDMIP 520
             +L AC     LE GRE+   + R  +  D  V   ++ ++Y + G       +  ++ 
Sbjct: 482 QTLLSACRVHGNLEIGREVGEILFR--MDTDNPVNYVMMSNIYAEAGYWKECERVRKLVK 539

Query: 521 AKDL 524
           AK L
Sbjct: 540 AKGL 543



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/411 (22%), Positives = 179/411 (43%), Gaps = 81/411 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSK---IDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++NA I      GN  K++ VL+   + +    D  T+ S L+ C  L ++  G ++H+ 
Sbjct: 173 SWNAMIAGHTHEGNGRKSL-VLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHAS 231

Query: 122 ICESGIVID-DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           +   G  I    ++ S +V ++  CG L E ++VF++I+   +  W+ L+  +++ GN  
Sbjct: 232 LITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLL 291

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRRV-------------------- 217
           E++ LF++++      D +  S ++     LA+V   +++                    
Sbjct: 292 EAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSII 351

Query: 218 ---------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                    ++A +LF E+  R+VVSW  MI+GY  +G+ EK + +F  M   G  +D  
Sbjct: 352 DMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEV 411

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN----NTLLDMYSKCGDLDGAIRV 324
             + +LS C++ G +   R    +  + C + ++  N      ++D+  + G L  A  +
Sbjct: 412 AYLALLSACSHSGLI---RESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNL 468

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
            E M                                   ++P+     ++L AC   G L
Sbjct: 469 IENM----------------------------------KLKPNEGIWQTLLSACRVHGNL 494

Query: 385 EIGKDVHDYIKENDMQSSL-YVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           EIG++V + +   D  + + YV   + ++YA+ G   + E V   +  K +
Sbjct: 495 EIGREVGEILFRMDTDNPVNYV--MMSNIYAEAGYWKECERVRKLVKAKGL 543


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 226/582 (38%), Positives = 353/582 (60%), Gaps = 13/582 (2%)

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G  V+     +VL+ C +  A+  G+ VHA  +K C+   +     L+ +Y+KC  L  A
Sbjct: 5   GLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDA 64

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            RV ++M ER+VVSWT+MI+GY++ G    A+ LF  M+  G  P+ +   ++L +C   
Sbjct: 65  RRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS 124

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
              ++G+ +H  + +   +S ++V ++L+DMYAK G + +A  VF+ +P +D+VS   +I
Sbjct: 125 SGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAII 184

Query: 442 G----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      ALDLF  +  +    + VT A +L A + LAAL+ GR++H ++LR  + 
Sbjct: 185 SGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLP 244

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
               + N+++DMY KCG L  +R +FD +P + +ISW  M+ GY  HG G +A+  F  M
Sbjct: 245 FYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLM 304

Query: 551 RQAG-IEPDEVSFISVLYACSHSGLVDEGWR-FFNMMRYECNIEPKLEHYACMVDLLSRT 608
           ++   ++PD V+F++VL  CSH G+ D G   F+ M+  +   EP++EHY C+VDL  R 
Sbjct: 305 KEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRA 364

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           G + EA+ FI+ MP  P A IWGSLL  CR+H  V + E VA  + E+E +N G YV+L+
Sbjct: 365 GRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILS 424

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           N+YA A +W++V+ +RE +  + + K PG SWIE+   ++ F A   SHP  +++ + ++
Sbjct: 425 NLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVR 484

Query: 729 RLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLR 788
            L +++K  GY P+    L + D+ +KE  L GHSEKLA+AFG++  P G  +R+ KNLR
Sbjct: 485 ELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLR 544

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +C DCH  AKF+S+   RE+ LRD NRFHH   G CSC  +W
Sbjct: 545 ICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 176/329 (53%), Gaps = 14/329 (4%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           + + +    R + DA ++ DE+ +R+VVSW  MISGY   G A + L +F EML  G   
Sbjct: 50  RLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAP 109

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +  T  TVL+ C +      GR +H+  +K  F   I   ++LLDMY+K G +  A RVF
Sbjct: 110 NEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF 169

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           + + ER VVS T++I+GYA+ G+ + A+ LFR + REG+  +     S+L A +    L+
Sbjct: 170 DGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALD 229

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---- 441
            G+ VH ++    +   + + N+L+DMY+KCGS+  +  +F+ MP + ++SWN M+    
Sbjct: 230 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYS 289

Query: 442 ------GALDLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYIL--RHGISA 491
                  A++LF  M +    +PD VT   +L  C+     +RG EI   ++  + G   
Sbjct: 290 KHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 349

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           +      +VD++ + G +  A      +P
Sbjct: 350 EIEHYGCVVDLFGRAGRVEEAFEFIKKMP 378



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 198/387 (51%), Gaps = 37/387 (9%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           +++ + Y S+L  C    ++ +G++VH+ + ++        L ++L+ ++  C  L + R
Sbjct: 7   EVEFQGYDSVLTECISQTAIREGQRVHAHMIKT-CYEPPVYLRTRLIVLYNKCRCLGDAR 65

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----- 207
           RV +++    V  W  ++  YS+ G   E+L+LF +M   G A + +TF+ VL       
Sbjct: 66  RVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSS 125

Query: 208 ---------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                      L +   + ++ +A ++FD L +RDVVS   +IS
Sbjct: 126 GFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIIS 185

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY   G+ E+ L++F+ +   G   +  T  +VL+  +   AL  GR VH+  L+A    
Sbjct: 186 GYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPF 245

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            +   N+L+DMYSKCG L  + R+F+ M ER+V+SW +M+ GY++ G+   A+ LF+ M 
Sbjct: 246 YVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMK 305

Query: 361 REG-IEPDVYAITSILHACACDGLLEIGKDV-HDYIKEND-MQSSLYVSNALMDMYAKCG 417
            E  ++PD     ++L  C+  G+ + G ++ ++ + + D  +  +     ++D++ + G
Sbjct: 306 EENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAG 365

Query: 418 SMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +A     +MP +   + W +++GA
Sbjct: 366 RVEEAFEFIKKMPFEPTAAIWGSLLGA 392



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 167/327 (51%), Gaps = 28/327 (8%)

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           +G+E +     S+L  C     +  G+ VH ++ +   +  +Y+   L+ +Y KC  + D
Sbjct: 4   QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACAS 470
           A  V ++MP +++VSW  MI           AL LFV ML +   P+  T A +L +C S
Sbjct: 64  ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
            +  + GR+IH  +++    +   V ++++DMY K G +  AR +FD +P +D++S T +
Sbjct: 124 SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI 183

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I+GY   G   +A+  F  +++ G+  + V++ SVL A S    +D G +  + +     
Sbjct: 184 ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHV----- 238

Query: 591 IEPKLEHYAC----MVDLLSRTGNLSEAYRFIEMMPVAPDATI--WGSLLCGCRIH---H 641
           +  KL  Y      ++D+ S+ G+L+ + R  + M   P+ T+  W ++L G   H    
Sbjct: 239 LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSM---PERTVISWNAMLVGYSKHGLGR 295

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLA 668
           E     K+ +   +++PD+  +  +L+
Sbjct: 296 EAVELFKLMKEENKVKPDSVTFLAVLS 322



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 168/380 (44%), Gaps = 57/380 (15%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIIC----ESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           T+ ++L  C      + G+++HS++     ES I +     GS L+ M+   G + E RR
Sbjct: 113 TFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV-----GSSLLDMYAKAGKICEARR 167

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAV 210
           VF+ +    V     ++  Y++ G  +E+L LF+++Q  G+ ++  T++ VL     LA 
Sbjct: 168 VFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAA 227

Query: 211 VGNSRRVKD-----------------------------AHKLFDELSDRDVVSWNCMISG 241
           + + R+V                               + ++FD + +R V+SWN M+ G
Sbjct: 228 LDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG 287

Query: 242 YIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAF----ALKA 296
           Y  +G+  + +E+FK M        D  T + VLSGC++ G  M  R +  F      K 
Sbjct: 288 YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGG--MEDRGLEIFYEMVNQKD 345

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMI-AGYAREGVFDGAIR 354
            F  EI     ++D++ + G ++ A    +KM  E +   W S++ A    + V  G   
Sbjct: 346 GFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFV 405

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM-----QSSLYVSNAL 409
             R +  E      Y I S L+A A  G  +  + V + +KE  +     +S + +   L
Sbjct: 406 ARRLLEIESENAGNYVILSNLYASA--GRWDDVRTVRELMKEKAVIKEPGRSWIELDQTL 463

Query: 410 MDMYAKCGSMADAESVFNQM 429
              +A   S    E VF ++
Sbjct: 464 HTFHASDRSHPRKEEVFAKV 483



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 1/172 (0%)

Query: 451 LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
           +Q  E +      +L  C S  A+  G+ +H ++++        +   ++ +Y KC  L 
Sbjct: 3   IQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLG 62

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            AR + D +P ++++SWT MI+GY   G+  +A+  F +M  +G  P+E +F +VL +C+
Sbjct: 63  DARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 122

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
            S     G R  + +  + + E  +   + ++D+ ++ G + EA R  + +P
Sbjct: 123 SSSGFQLG-RQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 133/288 (46%), Gaps = 24/288 (8%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICE 124
            A I  + ++G  E+A+++    ++  + +   TY S+L   + L +L+ G++VHS +  
Sbjct: 181 TAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR 240

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
           + +     VL + L+ M+  CG L   RR+F+ +    V  WN ++  YSK G  +E++ 
Sbjct: 241 AKLPFYV-VLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVE 299

Query: 185 LFKKMQSLG-IAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR------DVVSWNC 237
           LFK M+    +  DS TF  VL   +  G   R     ++F E+ ++      ++  + C
Sbjct: 300 LFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDR---GLEIFYEMVNQKDGFEPEIEHYGC 356

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           ++  +   G  E+  E  K+M    F    A   ++L  C     +  G  V    L+  
Sbjct: 357 VVDLFGRAGRVEEAFEFIKKM---PFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLE-- 411

Query: 298 FSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSVV-----SWTSM 339
              E + N  +L ++Y+  G  D    V E M E++V+     SW  +
Sbjct: 412 IESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIEL 459


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 271/745 (36%), Positives = 401/745 (53%), Gaps = 84/745 (11%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           V++ N LM+ YSKTG    +  LF +M        +++++ VL   +  G+   +    +
Sbjct: 49  VYLMNNLMNVYSKTGYALHARKLFDEMP----LRTAFSWNTVLSAYSKRGD---MDSTCE 101

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
            FD+L  RD VSW  MI GY   G   K + V  +M+  G      T+  VL+  A    
Sbjct: 102 FFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRC 161

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD------------------------- 317
           +  G+ VH+F +K      +S +N+LL+MY+KCGD                         
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221

Query: 318 ------LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI-EPDVYA 370
                 +D A+  FE+M ER +V+W SMI+G+ + G    A+ +F  M+R+ +  PD + 
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG------------- 417
           + S+L ACA    L IGK +H +I       S  V NAL+ MY++CG             
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341

Query: 418 --------------------SMADAESVFNQMPVKDIVSWNTMI----------GALDLF 447
                                M  A+++F  +  +D+V+W  MI           A++LF
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401

Query: 448 VAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
            +M+   + P+  T+A +L   +SLA+L  G++IHG  ++ G     +V+NA++ MY K 
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461

Query: 507 GVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           G +  A   FD+I   +D +SWT MI     HG   +A+  F  M   G+ PD ++++ V
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
             AC+H+GLV++G ++F+MM+    I P L HYACMVDL  R G L EA  FIE MP+ P
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
           D   WGSLL  CR+H  + L +  AE +  LEP+N+G Y  LAN+Y+   KWEE  K+R+
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +    +KK  G SWIE+K KV++F     +HP   +I   +K++  E+K+ GY P T  
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTAS 701

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L + +E  KE  L  HSEKLA+AFG+++ P   T+R+ KNLRVC DCH   KF+SK   
Sbjct: 702 VLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVG 761

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REI++RD+ RFHHFKDG CSCR +W
Sbjct: 762 REIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 208/487 (42%), Gaps = 110/487 (22%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKC------------------------------ 315
            + VH   +K+     +   N L+++YSK                               
Sbjct: 33  AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92

Query: 316 -GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
            GD+D     F+++ +R  VSWT+MI GY   G +  AIR+   MV+EGIEP  + +T++
Sbjct: 93  RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L + A    +E GK VH +I +  ++ ++ VSN+L++MYAKCG    A+ VF++M V+DI
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212

Query: 435 VSWNTMIG-----------------------------------------ALDLFVAMLQN 453
            SWN MI                                          ALD+F  ML++
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272

Query: 454 --FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
               PD  T+A +L ACA+L  L  G++IH +I+  G      V NA++ MY +CG +  
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332

Query: 512 ARSLF------------------------DMIPAK---------DLISWTIMIAGYGMHG 538
           AR L                         DM  AK         D+++WT MI GY  HG
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
              +AI  F  M   G  P+  +  ++L   S    +  G +          I   +   
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS-VSVS 451

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF--EL 656
             ++ + ++ GN++ A R  +++    D   W S++     H   + A ++ E +    L
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511

Query: 657 EPDNTGY 663
            PD+  Y
Sbjct: 512 RPDHITY 518



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/437 (22%), Positives = 169/437 (38%), Gaps = 110/437 (25%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI---DTKTYCSILQLCADLKSLEDGKKVHSI 121
            +N+ I  F + G   +A+++     +  +   D  T  S+L  CA+L+ L  GK++HS 
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCG---------------------------------DL 148
           I  +G  I  G++ + L+ M+  CG                                 D+
Sbjct: 305 IVTTGFDIS-GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-- 206
            + + +F  + +  V  W  ++  Y + G++ E++ LF+ M   G   +SYT + +L   
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVA 423

Query: 207 ------------------------------CLAVVGNSRRVKDAHKLFDELS-DRDVVSW 235
                                          + +   +  +  A + FD +  +RD VSW
Sbjct: 424 SSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSW 483

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
             MI     +G AE+ LE+F+ ML  G   D  T V V S C + G +  GR    F + 
Sbjct: 484 TSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR--QYFDMM 541

Query: 296 ACFSK---EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
               K    +S    ++D++ + G L  A    EKM                        
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM------------------------ 577

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
                      IEPDV    S+L AC     +++GK   + +   + ++S   S AL ++
Sbjct: 578 ----------PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYS-ALANL 626

Query: 413 YAKCGSMADAESVFNQM 429
           Y+ CG   +A  +   M
Sbjct: 627 YSACGKWEEAAKIRKSM 643


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/578 (40%), Positives = 347/578 (60%), Gaps = 24/578 (4%)

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++L  C   G+L  GR +H   L +    +   +  L+D+Y+ CG +  A R+F+ M +
Sbjct: 66  TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R+V  W  +I  YAREG  + A+RL+RGMV  G+EPD +    +L ACA    LE G++V
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREV 185

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAM 450
           H  +        ++V   ++DMYAKCG + DA +VF+ + V+D V WN+MI A       
Sbjct: 186 HQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYG----- 240

Query: 451 LQNFEPDGVTMAC-------ILPACASLAA----------LERGREIHGYILRHGISADR 493
            QN  P      C       I P  A+L +          L RGRE+HG+  R G     
Sbjct: 241 -QNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQD 299

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR-Q 552
            +  ++VDMY K G + +AR LF+ +  ++L+SW  MI GYGMHG   +A+A FN M+  
Sbjct: 300 KLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGD 359

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           A + PD ++F+ VL AC+H G+V+E   FF +M    +I+P ++HY C++D+L  TG   
Sbjct: 360 AQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFE 419

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           EAY  I+ M + PD+ IWG+LL GC+IH  V+L E   + + ELEP++ G YV L+N+YA
Sbjct: 420 EAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYA 479

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
           ++ KWE+  ++R+ ++ RGLKK   CSWIE+KGK + F+ G +SHP + +I   L+RL  
Sbjct: 480 QSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEG 539

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
            M   GY P       N D+ EK   +  HSE+LA+AFG+++ P G  + VTKNLRVC D
Sbjct: 540 LMSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCED 599

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CH + K +S+  +REI++RD NR+HHF +G CSC+ +W
Sbjct: 600 CHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 183/378 (48%), Gaps = 36/378 (9%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           + SILQ C    SL  G+++H  +  SG+   D VL +KLV ++  CG +   RR+F+ +
Sbjct: 65  HTSILQSCVASGSLRAGRQLHGRLLVSGLG-PDTVLSTKLVDLYAACGQVGHARRLFDGM 123

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------------ 206
               VF+WN+L+  Y++ G  + ++ L++ M   G+  D++T+  VLK            
Sbjct: 124 PKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGR 183

Query: 207 -----------------CLAVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                            C  VV    +   V DA  +FD ++ RD V WN MI+ Y  NG
Sbjct: 184 EVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNG 243

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
              + L + ++M   G    +AT+V+ +S  A+  AL  GR +H F  +  F  +     
Sbjct: 244 RPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKT 303

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IE 365
           +L+DMY+K G +  A  +FE++ +R +VSW +MI GY   G  D A+ LF  M  +  + 
Sbjct: 304 SLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVT 363

Query: 366 PDVYAITSILHACACDGLLEIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           PD      +L AC   G++E  K+  +  +    ++ ++     ++D+    G   +A  
Sbjct: 364 PDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYD 423

Query: 425 VFNQMPVK-DIVSWNTMI 441
           +   M ++ D   W  ++
Sbjct: 424 LIKGMSIEPDSGIWGALL 441



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 147/316 (46%), Gaps = 15/316 (4%)

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSW 235
           +G+ +    L  ++   G+  D+   + ++   A  G   +V  A +LFD +  R+V  W
Sbjct: 75  SGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACG---QVGHARRLFDGMPKRNVFLW 131

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N +I  Y   G  E  + +++ M+  G   D  T   VL  CA    L  GR VH     
Sbjct: 132 NVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSG 191

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
             + +++     ++DMY+KCG +D A  VF+ +  R  V W SMIA Y + G    A+ L
Sbjct: 192 TRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALAL 251

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
            R M   GI P +  + S + A A    L  G+++H +           +  +L+DMYAK
Sbjct: 252 CRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAK 311

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFE--PDGVTMAC 463
            G +  A  +F Q+  +++VSWN MI           AL LF  M  + +  PD +T   
Sbjct: 312 SGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVG 371

Query: 464 ILPACASLAALERGRE 479
           +L AC     +E  +E
Sbjct: 372 VLSACNHGGMVEEAKE 387



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 160/401 (39%), Gaps = 74/401 (18%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  I  +   G  E A+ +     +  +  D  TY  +L+ CA L  LE G++VH  + 
Sbjct: 131 WNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRV- 189

Query: 124 ESGIVI-DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            SG     D  + + +V M+  CG + + R VF+ I      +WN ++  Y + G   E+
Sbjct: 190 -SGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEA 248

Query: 183 LYLFKKMQSLGIAADSYTFSCV--------------------------------LKCLAV 210
           L L + M + GI     T                                       + +
Sbjct: 249 LALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDM 308

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLAT 269
              S  V+ A  LF++L  R++VSWN MI GY  +G A++ L +F +M  +     D  T
Sbjct: 309 YAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNIT 368

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V VLS C + G  M   A   F L             +++ YS                
Sbjct: 369 FVGVLSACNHGG--MVEEAKEFFYL-------------MVNAYSI--------------- 398

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK- 388
           + +V  +T +I      G F+ A  L +GM    IEPD     ++L+ C     +E+G+ 
Sbjct: 399 KPTVQHYTCVIDVLGHTGRFEEAYDLIKGM---SIEPDSGIWGALLNGCKIHKNVELGEL 455

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            +   I+     +  YV   L ++YA+ G    A  V   M
Sbjct: 456 ALQKLIELEPEDAGNYVH--LSNIYAQSGKWEKAARVRKLM 494


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/701 (36%), Positives = 401/701 (57%), Gaps = 35/701 (4%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           +   G ++  RRVF+++ +  +  WN ++  Y +    +E+ YLF KM      + +   
Sbjct: 26  YARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLI 85

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
           S  +K       +R V +A K FD + +R+VVSW  M+ GY+  G+  +   +F +M   
Sbjct: 86  SGYVK-------NRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEK 138

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               ++ +   +L G      +   R +  F +     K++     ++  Y + G L  A
Sbjct: 139 ----NVVSWTVMLGGLIQVRRIDEARGL--FDIMPV--KDVVARTNMISGYCQEGRLAEA 190

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F++M  R+V+SWT+MI+GY + G  D A +LF  M     E +  + T++L      
Sbjct: 191 RELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP----EKNEVSWTAMLMGYTQG 246

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
           G +E   ++ D +       ++   NA++  + + G +A A  VF+Q+  KD  +W+ MI
Sbjct: 247 GRIEEASELFDAMP----VKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMI 302

Query: 442 G----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      AL+LF  M  +  + +  ++  +L  CASLA+L+ GR++H  +++    
Sbjct: 303 KVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFD 362

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
           +D  VA+ ++ MYVKCG LV AR +FD    KD++ W  +I GY  HG   +A+  F++M
Sbjct: 363 SDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEM 422

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
             +G+  D V+F+ VL ACS++G V EG   F  M+ +  +EPK EHYACMVDLL R G 
Sbjct: 423 CSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGL 482

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
           +++A   I+ MPV  DA IWG+LL  CR H  + LAE  A+ + +LEP N G Y+LL+N+
Sbjct: 483 VNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNI 542

Query: 671 YAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS-HPHAKKIESLLKR 729
           YA   +W +V +LR  +  + + K+PGCSWIE++ +V++F  G S+ HP    I  +L++
Sbjct: 543 YASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEK 602

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
           L   ++  GY+P + + L + DE EK  +L  HSE+LA+AFG+L +P G  IRV KNLRV
Sbjct: 603 LDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRV 662

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CGDCH   K ++K   REI+LRD+NRFHHFKDG CSCR +W
Sbjct: 663 CGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 157/342 (45%), Gaps = 51/342 (14%)

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           + C S  I++N+ +   Y++ G ++ A RVF++M ++ +VSW SM+AGY +      A  
Sbjct: 10  RYCTSVAIAYNSQIAR-YARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARY 68

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LF  M     E +  +   ++     + ++   +   D + E ++ S      A++  Y 
Sbjct: 69  LFDKMP----ERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVS----WTAMVRGYV 120

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAAL 474
           + G +++AE++F QMP K++VSW  M+G L                          +  +
Sbjct: 121 QEGLVSEAETLFWQMPEKNVVSWTVMLGGL------------------------IQVRRI 156

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           +  R +   +    + A  N    ++  Y + G L  AR LFD +P +++ISWT MI+GY
Sbjct: 157 DEARGLFDIMPVKDVVARTN----MISGYCQEGRLAEARELFDEMPRRNVISWTTMISGY 212

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
             +G    A   F  M     E +EVS+ ++L   +  G ++E    F+ M       P 
Sbjct: 213 VQNGQVDVARKLFEVMP----EKNEVSWTAMLMGYTQGGRIEEASELFDAM-------PV 261

Query: 595 LEHYAC--MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
               AC  M+    + G +++A +  + +    D T W +++
Sbjct: 262 KAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGT-WSAMI 302



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 96/178 (53%), Gaps = 9/178 (5%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L   E  + +  +  S+L +CA L SL+ G++VH+ + +S     D  + S L+ M+V C
Sbjct: 320 LMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQF-DSDVFVASVLITMYVKC 378

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           GDL + R++F++     + +WN ++  Y++ G  +E+L +F +M S G+A D  TF  VL
Sbjct: 379 GDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVL 438

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEM 258
              +  G   +VK+  ++F+ +  + +V      + CM+      G+    +++ ++M
Sbjct: 439 SACSYTG---KVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKM 493



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 34/239 (14%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           ++  F   G++ + R+VF++I       W+ ++  Y + G   E+L LF  MQ  G+ ++
Sbjct: 270 MILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSN 329

Query: 198 SYTFSCVLKC---LAVVGNSRRVK-----------------------------DAHKLFD 225
             +   VL     LA + + R+V                               A ++FD
Sbjct: 330 FPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFD 389

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
             S +D+V WN +I+GY  +G+ E+ L+VF EM + G   D  T V VLS C+  G +  
Sbjct: 390 RFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKE 449

Query: 286 GRAV-HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 342
           G  +  +   K     +      ++D+  + G ++ A+ + +KM  E   + W +++  
Sbjct: 450 GLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGA 508


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 244/623 (39%), Positives = 377/623 (60%), Gaps = 21/623 (3%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +FD +  R ++ WN +I  Y+ N  +  G+ +F E+++  +  D  T+  V+ GCA 
Sbjct: 66  ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCAR 124

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
            G +  G+ +H  ALK  F  ++    +L++MYSKCG++D A +VF+ M ++ VV W S+
Sbjct: 125 LGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSL 184

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I GYAR G  D A++LF  M     E D ++ T ++   +  G +E  + + D +   ++
Sbjct: 185 IDGYARCGEIDIALQLFEEMP----ERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNL 240

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
            S     NA+++ Y K G    A  +F QMP+ D+V+WN MI           A+ +F  
Sbjct: 241 VSW----NAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFM 296

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           ML+    P   T+  +L A + LA L +GR IH Y+ ++G   D  +  ++++MY KCG 
Sbjct: 297 MLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGC 356

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +  A ++F  I  K +  WT +I G G+HG    A+A F +M + G++P+ + FI VL A
Sbjct: 357 IESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNA 416

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           C+H+GLVD+G ++F+MM  E  IEP LEHY C+VD+L R G+L EA   IE MP++P+  
Sbjct: 417 CNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKV 476

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           IW SLL G R H ++ + E  A+ V E+ P+  G Y+LL+N+YA +  WE+V  +RE + 
Sbjct: 477 IWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMY 536

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
           +RG +K+PGCS +E KG ++ F+ G  SHP  K+I + +  ++ ++K  G+ P T   L+
Sbjct: 537 KRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLL 596

Query: 749 NAD-EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
             + E EKE  L  HSE+LA+AFG++N+  G  IR+ KNLRVC DCH + K +SK   RE
Sbjct: 597 CIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSRE 656

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           I++RD+ RFHHFK+G CSC  +W
Sbjct: 657 IIVRDNCRFHHFKNGSCSCMDYW 679



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 199/382 (52%), Gaps = 41/382 (10%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T   +++ CA L  +++GK++H +  + G   D  V GS LV M+  CG++   R+V
Sbjct: 111 DNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGS-LVNMYSKCGEIDCARKV 169

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+ + +  V +WN L+  Y++ G    +L LF++M       D+++++ ++  L+  G  
Sbjct: 170 FDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPE----RDAFSWTVLVDGLSKCG-- 223

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE----------------- 257
            +V+ A KLFD++  R++VSWN MI+GY+ +G  +  LE+F +                 
Sbjct: 224 -KVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYE 282

Query: 258 --------------MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
                         ML LG     AT+V+VLS  +    L  GR +H++  K  F  +  
Sbjct: 283 LNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGI 342

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
              +L++MY+KCG ++ A+ VF  + ++ V  WT++I G    G+ + A+ LF  M + G
Sbjct: 343 LGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTG 402

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHD-YIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           ++P+      +L+AC   GL++ G+   D  + E  ++ +L     L+D+  + G + +A
Sbjct: 403 LKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEA 462

Query: 423 ESVFNQMPVK-DIVSWNTMIGA 443
           ++    MP+  + V W +++G 
Sbjct: 463 KNTIENMPISPNKVIWMSLLGG 484



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 181/367 (49%), Gaps = 28/367 (7%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYS--KCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           +HAF+LK         ++ LL +YS  K  DL  A  +F+++  RS++ W ++I  Y   
Sbjct: 32  LHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVEN 91

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
                 I LF  +V E + PD + +  ++  CA  G+++ GK +H    +    S ++V 
Sbjct: 92  QFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQ 150

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNF-EPDGV 459
            +L++MY+KCG +  A  VF+ M  KD+V WN++I      G +D+ + + +   E D  
Sbjct: 151 GSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAF 210

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVA--NAIVDMYVKCGVLVLARSLFD 517
           +   ++   +    +E  R++   +        RN+   NA+++ Y+K G    A  LF 
Sbjct: 211 SWTVLVDGLSKCGKVESARKLFDQM------PCRNLVSWNAMINGYMKSGDFDSALELFY 264

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            +P  DL++W +MIAGY ++G   DA+  F  M + G  P   + +SVL A S   ++ +
Sbjct: 265 QMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGK 324

Query: 578 G-WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA---YRFIEMMPVAPDATIWGSL 633
           G W    M +    ++  L     ++++ ++ G +  A   +R I+   V      W ++
Sbjct: 325 GRWIHSYMEKNGFELDGILG--TSLIEMYAKCGCIESALTVFRAIQKKKVGH----WTAI 378

Query: 634 LCGCRIH 640
           + G  IH
Sbjct: 379 IVGLGIH 385



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 10/225 (4%)

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMY--VKCGVLVLARSLFDMIPAKDLISWT 528
           L A +   ++H + L+  I     V++ ++ +Y   K   L  ARS+FD I  + LI W 
Sbjct: 23  LCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWN 82

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            +I  Y  + F  D I  F+++    + PD  +   V+  C+  G+V EG +  + +  +
Sbjct: 83  TIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEG-KQIHGLALK 140

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
                 +     +V++ S+ G +  A +  + M +  D  +W SL+ G     E+ +A +
Sbjct: 141 IGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDGYARCGEIDIALQ 199

Query: 649 VAEHVFELEPDNTGY-YVLLANVYAEAEKWEEVKKLREKISRRGL 692
               +FE  P+   + + +L +  ++  K E  +KL +++  R L
Sbjct: 200 ----LFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNL 240



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 7/242 (2%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S+    T  S+L   + L  L  G+ +HS + ++G  +D G+LG+ L+ M+  CG ++  
Sbjct: 302 SRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELD-GILGTSLIEMYAKCGCIESA 360

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
             VF  I   KV  W  ++      G    +L LF +M   G+  ++  F  VL      
Sbjct: 361 LTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHA 420

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG-LEVFKEML-NLGFNVDLAT 269
           G    V D  + FD + +   +       G + + +   G LE  K  + N+  + +   
Sbjct: 421 G---LVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVI 477

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            +++L G  N G +  G       ++    + I     L +MY+  G  +    V E M 
Sbjct: 478 WMSLLGGSRNHGKIDIGEYAAQRVIEVA-PETIGCYILLSNMYAASGMWEKVSHVREMMY 536

Query: 330 ER 331
           +R
Sbjct: 537 KR 538


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/652 (38%), Positives = 378/652 (57%), Gaps = 44/652 (6%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +F  + + + + WN M+ GY  +      L+++  M++LG   +  T   +L  CA   A
Sbjct: 22  VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS---- 338
              G+ +H   LK  +  ++  + +L+ MY++ G L+ A +VF++   R VVS+T+    
Sbjct: 82  FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141

Query: 339 ---------------------------MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
                                      MI+GYA  G +  A+ LF+ M++  + PD   +
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            ++L ACA    +E+G+ VH +I ++   S+L + NAL+D+Y+KCG +  A  +F  +  
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREI 480
           KD+VSWNT+IG          AL LF  ML++ E P+ VT+  ILPACA L A++ GR I
Sbjct: 262 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWI 321

Query: 481 HGYILR--HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           H YI +    ++   ++  +++DMY KCG +  A  +F+ +  K L SW  MI G+ MHG
Sbjct: 322 HVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG 381

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
                   F+ MR+ GIEPD+++F+ +L ACSHSG +D G   F  M  + +I PKLEHY
Sbjct: 382 RANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHY 441

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
            CM+DLL  +G   EA   I+ MP+ PD  IW SLL  CR H  ++LAE  A ++ ++EP
Sbjct: 442 GCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEP 501

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
           +N G YVLL+N+YA A +W+EV K+R  ++ +G+KK PGCS IEI  +V+ F+ G   HP
Sbjct: 502 ENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHP 561

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
             ++I  +L+ +   ++  G+ P T   L   +E  KE AL  HSEKLA+AFG+++   G
Sbjct: 562 RNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPG 621

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             + + KNLRVC +CHE  K +SK  +REI+ RD  RFHHF+DG CSC  FW
Sbjct: 622 TKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/493 (30%), Positives = 243/493 (49%), Gaps = 57/493 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T+  +L+ CA  K+ E+G+++H  + + G   D  V  S L+ M+   G L++  +V
Sbjct: 65  NSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTS-LISMYAQNGRLEDAHKV 123

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F++  +  V  +  L+  Y+ +GN                                    
Sbjct: 124 FDRSSHRDVVSYTALITGYASSGN------------------------------------ 147

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             ++ A ++FDE+  +DVVSWN MISGY   G  ++ LE+FKEM+      D  TMVTVL
Sbjct: 148 --IRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVL 205

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S CA   ++  GR VH++     F   +   N L+D+YSKCG ++ A  +FE +  + VV
Sbjct: 206 SACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVV 265

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW ++I GY    ++  A+ LF+ M+R G  P+   I SIL ACA  G ++IG+ +H YI
Sbjct: 266 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYI 325

Query: 395 --KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------G 442
             K  D+ ++  +  +L+DMYAKCG +  A  VFN M  K + SWN MI           
Sbjct: 326 DKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANA 385

Query: 443 ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIV 500
             DLF  M +N  EPD +T   +L AC+    L+ GR I   + + + I+        ++
Sbjct: 386 GFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMI 445

Query: 501 DMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHGFGCDAIATF--NDMRQAGIEP 557
           D+    G+   A+ +   +P + D + W  ++     HG   +   +F  N M+     P
Sbjct: 446 DLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHG-NLELAESFARNLMKVEPENP 504

Query: 558 DEVSFISVLYACS 570
                +S +YA +
Sbjct: 505 GSYVLLSNIYATA 517



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 164/375 (43%), Gaps = 40/375 (10%)

Query: 44  SSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCS 101
           SS  I        +  V    ++NA I  + E G+ ++A+E+     K+ +  D  T  +
Sbjct: 144 SSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVT 203

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L  CA  +S+E G++VHS I + G   +  ++ + L+ ++  CG ++    +F  +   
Sbjct: 204 VLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNA-LIDLYSKCGQVETACGLFEGLSCK 262

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-------- 213
            V  WN L+  Y+    +KE+L LF++M   G + +  T   +L   A +G         
Sbjct: 263 DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIH 322

Query: 214 ---SRRVKD-----------------------AHKLFDELSDRDVVSWNCMISGYIANGV 247
               +++KD                       AH++F+ +  + + SWN MI G+  +G 
Sbjct: 323 VYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGR 382

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV-HAFALKACFSKEISFNN 306
           A  G ++F  M   G   D  T V +LS C++ G L  GR +  +       + ++    
Sbjct: 383 ANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYG 442

Query: 307 TLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGI 364
            ++D+    G    A  + + M  E   V W S++    R G  + A    R +++ E  
Sbjct: 443 CMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPE 502

Query: 365 EPDVYAITSILHACA 379
            P  Y + S ++A A
Sbjct: 503 NPGSYVLLSNIYATA 517


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/741 (34%), Positives = 414/741 (55%), Gaps = 59/741 (7%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           F   G +++  ++F++++    F+WN+++  ++  G + E+L L+ +M   G+ ADS+T+
Sbjct: 70  FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129

Query: 202 SCVLKCLAVVGNSRRVK--------------------------------DAHKLFDELSD 229
             V+K +  + +    K                                DA K+F+E+ +
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           RD+VSWN MISGY+A     + L +FKEML  GF  D  + ++ L  C++  +   G+ +
Sbjct: 190 RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKEL 249

Query: 290 HAFALKACF-SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           H  A+++   + ++    ++LDMYSK G++  A R+F+ + +R++V+W  +I  YAR   
Sbjct: 250 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSR 309

Query: 349 FDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
              A   F+ M  + G++PDV  + ++L ACA   +LE G+ +H Y         + +  
Sbjct: 310 VTDAFLCFQKMSEQNGLQPDVITLINLLPACA---ILE-GRTIHGYAMRRGFLPHIVLDT 365

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNFEP 456
           AL+DMY + G +  AE +F+++  K+++SWN++I A          L+LF  +   +  P
Sbjct: 366 ALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLP 425

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           D  T+A ILPA A   +L  GR+IH YI++    ++  + N++V MY  CG L  AR  F
Sbjct: 426 DSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCF 485

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           + +  KD++SW  +I  Y +HGFG  ++  F++M  + ++P++ +F S+L ACS SG+VD
Sbjct: 486 NHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVD 545

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           EGW +F  M+ E  I+P +EHY  M+DL+ RTGN S A RFI  MP  P A IWGSLL  
Sbjct: 546 EGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNA 605

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
            R H+++ +AE  AE +F++E DNTG YVLL N+YAEA +WE+V +++  +  +G+ +  
Sbjct: 606 SRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTS 665

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLL---KRLRLEMKREG----YFPKTRYALIN 749
             S +E K K ++   G  SH    KI  +L    R+  E + E     Y  K R   + 
Sbjct: 666 SRSTVEAKSKTHVLTNGDRSHVETNKIYEVLDIVSRMIGEEEEEDSYVHYVSKLRRETLA 725

Query: 750 ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIV 809
                       HS +LA  FG+++   G+T+ V  N R+C  CHE  +  SK  RREIV
Sbjct: 726 KSRSNSPRR---HSVRLATCFGLISTETGRTVTVRNNTRICRKCHEFLEKASKMTRREIV 782

Query: 810 LRDSNRFHHFKDGRCSCRGFW 830
           + DS  FHHF +GRCSC  +W
Sbjct: 783 VGDSKIFHHFSNGRCSCGNYW 803



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 255/508 (50%), Gaps = 42/508 (8%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           + L    +S  ++DA +LFDE++  D   WN MI G+ + G+  + L+++  M+  G   
Sbjct: 65  RALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKA 124

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T   V+       +L  G+ +HA  +K  F  ++   N+L+ +Y K G    A +VF
Sbjct: 125 DSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVF 184

Query: 326 EKMGERSVVSWTSMIAGY-AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           E+M ER +VSW SMI+GY A E  F  ++ LF+ M++ G +PD ++  S L AC+     
Sbjct: 185 EEMPERDIVSWNSMISGYLALEDGFR-SLMLFKEMLKFGFKPDRFSTMSALGACSHVYSP 243

Query: 385 EIGKDVHDYIKENDMQS-SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
            +GK++H +   + +++  + V  +++DMY+K G ++ AE +F  +  ++IV+WN +IG 
Sbjct: 244 NMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGC 303

Query: 443 ------ALDLFVAML----QN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                   D F+       QN  +PD +T+  +LPACA L     GR IHGY +R G   
Sbjct: 304 YARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAIL----EGRTIHGYAMRRGFLP 359

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
              +  A++DMY + G L  A  +FD I  K+LISW  +IA Y  +G    A+  F  + 
Sbjct: 360 HIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLW 419

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM---RYECN--IEPKLEHYACMVDLLS 606
            + + PD  +  S+L A + S  + EG +    +   RY  N  I   L H   M     
Sbjct: 420 DSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMC---- 475

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL-----AEKVAEHVFELEPDNT 661
             G+L +A +    + +  D   W S++    +H   ++     +E +A  V   +P+ +
Sbjct: 476 --GDLEDARKCFNHV-LLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKV---DPNKS 529

Query: 662 GYYVLLANVYAEA---EKWEEVKKLREK 686
            +  LLA         E WE  + ++ +
Sbjct: 530 TFASLLAACSISGMVDEGWEYFESMKRE 557



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 181/382 (47%), Gaps = 31/382 (8%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  +  S L  C+ + S   GK++H     S I   D ++ + ++ M+   G++    
Sbjct: 224 KPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAE 283

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYTFSCVLKCLAVV 211
           R+F  I    +  WN+L+  Y++     ++   F+KM +  G+  D  T   +L   A++
Sbjct: 284 RIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAIL 343

Query: 212 ----------------------------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                       G   ++K A  +FD +++++++SWN +I+ Y+
Sbjct: 344 EGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYV 403

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            NG     LE+F+++ +     D  T+ ++L   A   +L  GR +HA+ +K+ +     
Sbjct: 404 QNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTI 463

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N+L+ MY+ CGDL+ A + F  +  + VVSW S+I  YA  G    ++ LF  M+   
Sbjct: 464 ILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASK 523

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADA 422
           ++P+     S+L AC+  G+++ G +  + +K E  +   +     ++D+  + G+ + A
Sbjct: 524 VDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSA 583

Query: 423 ESVFNQMPVKDIVS-WNTMIGA 443
           +    +MP       W +++ A
Sbjct: 584 KRFIREMPFLPTARIWGSLLNA 605



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 3/150 (2%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  + + G    A+E+      S +  D+ T  SIL   A+  SL +G+++H+ I
Sbjct: 394 SWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYI 453

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +S    +  +L S LV M+  CGDL++ R+ FN +    V  WN ++  Y+  G  + S
Sbjct: 454 VKSRYGSNTIILNS-LVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRIS 512

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           + LF +M +  +  +  TF+ +L   ++ G
Sbjct: 513 VCLFSEMIASKVDPNKSTFASLLAACSISG 542


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 247/614 (40%), Positives = 364/614 (59%), Gaps = 13/614 (2%)

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
           S   + +WN +++ +       + L VF+  L      D  T    LS CA  G L  G 
Sbjct: 65  SPSSIPAWNALLAAHSRGASPHEALRVFRA-LPPAARPDSTTFTLALSACARLGDLATGE 123

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            V   A  A +  +I   +++L++Y+KCG +D A++VF++M +R  V+W++M+ G+   G
Sbjct: 124 VVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAG 183

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
               AI ++  M R+G+E D   I  ++ ACA  G   +G  VH Y+  + MQ  + +S 
Sbjct: 184 QPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVIST 243

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEP 456
           +L+DMYAK G    A  VF  MP ++ VSW+ +I           AL LF  M +    P
Sbjct: 244 SLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHP 303

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           +   +   L AC+ L  L+ G+ IHG+ILR  +  DR V  A++DMY KCG L  A+ LF
Sbjct: 304 NSGPVVGALLACSDLGLLKLGKSIHGFILR-TLELDRMVGTAVIDMYSKCGSLSSAQMLF 362

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           D + ++DLISW +MIA  G HG G DA++ F +M++  + PD  +F S+L A SHSGLV+
Sbjct: 363 DKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVE 422

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           EG  +FN M  E  IEP  +H  C+VDLL+R+G + EA   +  +   P  +I  +LL G
Sbjct: 423 EGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSG 482

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
           C  +++++L E  AE + EL+P + G   L++N+YA A+ W +V+++R+ +   G KK P
Sbjct: 483 CLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAP 542

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
           GCS IEI+G ++ FV    SHP  ++I  ++ +L  EM++ GY PKT +   + +E  KE
Sbjct: 543 GCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVKE 602

Query: 757 VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
             L  HSE+LA AFG+LN   G  + V KNLRVCGDCH+  K+MSK A REIV+RD+ RF
Sbjct: 603 QLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRF 662

Query: 817 HHFKDGRCSCRGFW 830
           HHFKDG CSC  +W
Sbjct: 663 HHFKDGACSCGDYW 676



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 228/483 (47%), Gaps = 51/483 (10%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D +    +L  CA L++L    ++H+++  S       +L S L   +   GDL      
Sbjct: 2   DPRRLRRLLSSCAALRTL---TRLHALLIVSSSASCHHILSSCLATAYARAGDLAAAEST 58

Query: 155 FNKIDNGKVFI--WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
                     I  WN L+  +S+  +  E+L +F+ +       DS TF+  L   A +G
Sbjct: 59  LATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALPP-AARPDSTTFTLALSACARLG 117

Query: 213 N-------SRR-------------------------VKDAHKLFDELSDRDVVSWNCMIS 240
           +       + R                         + DA K+FD +  RD V+W+ M++
Sbjct: 118 DLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVT 177

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G++  G   + +E++  M   G   D   +V V+  CA  G    G +VH + L+     
Sbjct: 178 GFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQM 237

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++  + +L+DMY+K G  D A RVFE M  R+ VSW+++I+  A+ G  D A+ LFR M 
Sbjct: 238 DVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQ 297

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
             G+ P+   +   L AC+  GLL++GK +H +I    ++    V  A++DMY+KCGS++
Sbjct: 298 VSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLS 356

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACA 469
            A+ +F+++  +D++SWN MI           AL LF  M +N   PD  T A +L A +
Sbjct: 357 SAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALS 416

Query: 470 SLAALERGR-EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
               +E G+   +  +  +GI         IVD+  + G++  A  L   + +K  IS  
Sbjct: 417 HSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISIL 476

Query: 529 IMI 531
           + +
Sbjct: 477 VAL 479



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 16/243 (6%)

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPV--KDIVSWNTMIG----------ALDLFVAMLQ 452
           +S+ L   YA+ G +A AES     P     I +WN ++           AL +F A+  
Sbjct: 38  LSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALPP 97

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
              PD  T    L ACA L  L  G  +       G   D  V ++++++Y KCG +  A
Sbjct: 98  AARPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDA 157

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +FD +  +D ++W+ M+ G+   G    AI  +  MR+ G+E DEV  + V+ AC+ +
Sbjct: 158 VKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAAT 217

Query: 573 GLVDEGWRFFN-MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           G    G      ++R+   ++  +     +VD+ ++ G   +A R  E+MP   D + W 
Sbjct: 218 GDARMGASVHGYLLRHAMQMDVVIS--TSLVDMYAKNGLFDQARRVFELMPHRNDVS-WS 274

Query: 632 SLL 634
           +L+
Sbjct: 275 ALI 277



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 34/256 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            ++  +  F   G   +A+E+     +  +  D      ++Q CA       G  VH  +
Sbjct: 171 TWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYL 230

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
               + +D  V+ + LV M+   G   + RRVF  + +     W+ L+ + ++ GN  E+
Sbjct: 231 LRHAMQMDV-VISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEA 289

Query: 183 LYLFKKMQSLGIAADS-----YTFSC---------------VLKCLAV---VGNS----- 214
           L LF+ MQ  G+  +S        +C               +L+ L +   VG +     
Sbjct: 290 LGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRMVGTAVIDMY 349

Query: 215 ---RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                +  A  LFD++  RD++SWN MI+   A+G     L +F+EM       D AT  
Sbjct: 350 SKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFA 409

Query: 272 TVLSGCANCGALMFGR 287
           ++LS  ++ G +  G+
Sbjct: 410 SLLSALSHSGLVEEGK 425



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 111/240 (46%), Gaps = 31/240 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           +++A I +  + GN ++A+ +    + S +  ++      L  C+DL  L+ GK +H  I
Sbjct: 272 SWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFI 331

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +  +  D ++G+ ++ M+  CG L   + +F+K+ +  +  WN+++      G  +++
Sbjct: 332 LRT--LELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDA 389

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
           L LF++M+   +  D  TF+ +L  L+  G              L +     +NCM++ Y
Sbjct: 390 LSLFQEMKRNEVRPDHATFASLLSALSHSG--------------LVEEGKFWFNCMVNEY 435

Query: 243 -----------IANGVAEKGL--EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
                      I + +A  GL  E    + +L     ++ +V +LSGC N   L  G + 
Sbjct: 436 GIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLNNNKLELGEST 495


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/687 (36%), Positives = 389/687 (56%), Gaps = 44/687 (6%)

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +M   G+   +Y  S +L+   +  +   +  A  +FD + +  ++ WN M  G+  +  
Sbjct: 24  QMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHALSSD 83

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
               L+++  M++LG   +  T   +L  CA   A   G+ +H   LK  F  ++  + +
Sbjct: 84  PVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTS 143

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA--------------- 352
           L+ MY + G L+ A +V +K   R VVS+T++I GYA  G  + A               
Sbjct: 144 LISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSW 203

Query: 353 ----------------IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
                           + LF+ M++  + PD   + ++L ACA  G +E+G+ VH +I +
Sbjct: 204 NAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWIND 263

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           +    +L + NAL+D+Y+KCG +  A  +F  +  KD++SWNT+IG          AL L
Sbjct: 264 HGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLL 323

Query: 447 FVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRH--GISADRNVANAIVDMY 503
           F  ML++ E P+ VTM  IL ACA L A++ GR IH YI +   G++   ++  +++DMY
Sbjct: 324 FQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 383

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +  A+ +FD +  + L SW  MI G+ MHG    A   F+ MR+ GIEPD+++F+
Sbjct: 384 AKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFV 443

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L ACSHSG++D G   F  M  +  + PKLEHY CM+DL   +G   EA + I  M +
Sbjct: 444 GLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEM 503

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            PD  IW SLL  C++H  V+L E  A+++ ++EP+N G YVLL+N+YA AE+W EV K 
Sbjct: 504 EPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKT 563

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R  ++ +G+KK PGCS IEI   V+ F+ G   HP  ++I  +L+ + + ++  G+ P T
Sbjct: 564 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 623

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              L   +E  KE AL  HSEKLA+AFG+++   G  + + KNLRVC +CHE  K +SK 
Sbjct: 624 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 683

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +REI+ RD  RFHHF+DG CSC  +W
Sbjct: 684 YKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 191/419 (45%), Gaps = 63/419 (15%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D   + S++ +      LED +KV            D V  + L+  + + G ++   +
Sbjct: 136 LDLYIHTSLISMYVQNGRLEDAQKVXDKSSHR-----DVVSYTALITGYASRGXIESAHK 190

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           +F++I    V  WN  +  Y++TGN+KE+L LFKKM    +  D  T   VL   A  G+
Sbjct: 191 MFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGS 250

Query: 214 SRRVKDAHK--------------------------------LFDELSDRDVVSWNCMISG 241
               +  H                                 LF  LS++DV+SWN +I G
Sbjct: 251 IELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGG 310

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC--FS 299
           Y    + ++ L +F++ML  G   +  TM+++LS CA+ GA+  GR +H +  K     +
Sbjct: 311 YTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVT 370

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
              S   +L+DMY+KCGD++ A +VF+ M  RS+ SW +MI G+A  G  + A  +F  M
Sbjct: 371 NASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 430

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDV-HDYIKENDMQSSLYVSNALMDMYAKCGS 418
            + GIEPD      +L AC+  G+L++G+ +     ++  +   L     ++D+    G 
Sbjct: 431 RKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGL 490

Query: 419 MADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERG 477
             +AE + N M +                       EPDGV    +L AC     +E G
Sbjct: 491 FKEAEKMINTMEM-----------------------EPDGVIWCSLLKACKMHGNVELG 526



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 171/410 (41%), Gaps = 76/410 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + E GN ++A+E+     K+ +  D  T  ++L  CA   S+E G++VHS I
Sbjct: 202 SWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWI 261

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   +  ++ + L+ ++  CG+L+    +F  + N  V  WN L+  Y+    +KE+
Sbjct: 262 NDHGFGXNLKIVNA-LIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEA 320

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----------SRRVKD------------ 219
           L LF+ M   G   +  T   +L   A +G             +R+K             
Sbjct: 321 LLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 380

Query: 220 -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      A ++FD + +R + SWN MI G+  +G A    ++F  M   G   D  
Sbjct: 381 DMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDI 440

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V +LS C++ G L  GR  H F       + ++ +  L+      G            
Sbjct: 441 TFVGLLSACSHSGMLDLGR--HIF-------RSMTRDYKLMPKLEHYG------------ 479

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                     MI      G+F  A ++   M    +EPD     S+L AC   G +E+G+
Sbjct: 480 ---------CMIDLXGHSGLFKEAEKMINTM---EMEPDGVIWCSLLKACKMHGNVELGE 527

Query: 389 D-VHDYIKENDMQSSLYVSNALMDMYA---KCGSMADAESVFNQMPVKDI 434
               + IK        YV   L ++YA   +   +A   ++ N   +K +
Sbjct: 528 SYAQNLIKIEPENPGSYV--LLSNIYATAERWNEVAKTRALLNDKGMKKV 575


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/717 (35%), Positives = 408/717 (56%), Gaps = 50/717 (6%)

Query: 136  SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGI 194
            +KL+  +   G  +  +RVF+       F+W +L+  Y   G F+E++ L+ +M      
Sbjct: 384  TKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQT 443

Query: 195  AADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
               ++ F  VLK  +  G+                         +S    NG A +GL++
Sbjct: 444  QISNFVFPSVLKACSGFGD-------------------------LSVGGKNGQASEGLDM 478

Query: 255  FKEMLNLGFNVDLATMVTVLSGCANCGALMFGR--------AVHAFALKACFSKEISF-N 305
            F +M++     D  TM++V   C+  G+L  GR        +VH F ++     E+ F  
Sbjct: 479  FSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLG 538

Query: 306  NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
              L+++Y+  G+L    +VFE + E++++SW ++I+ + R G  + A+ LF  M  +G+ 
Sbjct: 539  PALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLM 598

Query: 366  PDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAES 424
            PD Y++ S L AC      ++G  +H YI K  +     +V NAL+DMYAKCG +  A  
Sbjct: 599  PDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND--FVQNALIDMYAKCGFVHSANK 656

Query: 425  VFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAA 473
            +F ++  K +V+WN+MI           A+ LF  M  N  + D +T   ++ AC+ L  
Sbjct: 657  MFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGY 716

Query: 474  LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
            LE+G+ +H  ++ +G+  D  +  A+ DMY KCG L +A  +FD +  + ++SW++MIAG
Sbjct: 717  LEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAG 776

Query: 534  YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
            YGMHG     I+ FN M  +GI+P++++F+ +L ACSH+G V+EG  +FN M  E  +EP
Sbjct: 777  YGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEP 835

Query: 594  KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            K +H+ACMVDLLSR G+L+ AY+ I  +P   +++IWG+LL GCRIH  + + + + +++
Sbjct: 836  KHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNL 895

Query: 654  FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
             +++  +TGYY LL+N+YAE   W++  K+R  +  +GL+K PG S IEI  K+  F  G
Sbjct: 896  LDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPG 955

Query: 714  GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
             +SH   K I   L+  R  +  + Y  +   +++   +  KE  +  HSEKLA+AFGI+
Sbjct: 956  DTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGII 1015

Query: 774  NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            N   G T+R++KNLRVC DCH  AK  SK   REI++RD NRFH F++G CSC  +W
Sbjct: 1016 NTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 1072



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 186/381 (48%), Gaps = 39/381 (10%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSL--------EDGKKVHSIICESGIVIDDGVLGSKLVF 140
           SE  + D+ T  S+ + C++L SL        ++G+ VH  +    +  +   LG  L+ 
Sbjct: 484 SEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALME 543

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           ++   G+L++  +VF  I    +  WN L+  +++ G  +E+L LF +MQ+ G+  DSY+
Sbjct: 544 LYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYS 603

Query: 201 FSCVLKCLAVVGNSRR-------------------------------VKDAHKLFDELSD 229
            +  L     +  S+                                V  A+K+F+++ +
Sbjct: 604 LASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKE 663

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           + +V+WN MI G+  NG + + + +F +M      +D  T ++V+  C++ G L  G+ V
Sbjct: 664 KSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWV 723

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H   +     K+   +  L DMYSKCG+L  A  VF++M ERS+VSW+ MIAGY   G  
Sbjct: 724 HHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQI 783

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
           +  I LF  M+  GI+P+      IL AC+  G +E GK   + + E  ++        +
Sbjct: 784 NATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACM 843

Query: 410 MDMYAKCGSMADAESVFNQMP 430
           +D+ ++ G +  A  +   +P
Sbjct: 844 VDLLSRAGDLNGAYQIITSLP 864



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 14/154 (9%)

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           CA+   L    ++H ++   G+      +  +++ Y + G+   ++ +FD  P  D   W
Sbjct: 358 CATSTTLT---QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMW 414

Query: 528 TIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACS---------HSGLVDE 577
            ++I  Y   GF  +A++ +++M  Q   +     F SVL ACS          +G   E
Sbjct: 415 GVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASE 474

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
           G   F+ M  E  +EP       + +  S  G+L
Sbjct: 475 GLDMFSQMISEA-VEPDSVTMLSVTEACSELGSL 507


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/776 (32%), Positives = 426/776 (54%), Gaps = 51/776 (6%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           ++  C  LK    G+++   + +SG+     V  S L+ M  + G++     +F+++   
Sbjct: 166 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS-LISMLGSMGNVDYANYIFDQMSER 224

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------ 215
               WN +   Y++ G+ +ES  +F  M+      +S T S +L  L  V + +      
Sbjct: 225 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 284

Query: 216 --------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                     R  +A+ +F ++  +D++SWN +++ ++ +G + 
Sbjct: 285 GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSL 344

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
             L +   M++ G +V+  T  + L+ C        GR +H   + +         N L+
Sbjct: 345 DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALV 404

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
            MY K G++  + RV  +M  R VV+W ++I GYA +   D A+  F+ M  EG+  +  
Sbjct: 405 SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 464

Query: 370 AITSILHACACDG-LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
            + S+L AC   G LLE GK +H YI     +S  +V N+L+ MYAKCG ++ ++ +FN 
Sbjct: 465 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 524

Query: 429 MPVKDIVSWNTMIGA---------LDLFVAMLQNF--EPDGVTMACILPACASLAALERG 477
           +  ++I++WN M+ A         +   V+ +++F    D  + +  L A A LA LE G
Sbjct: 525 LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG 584

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA---KDLISWTIMIAGY 534
           +++HG  ++ G   D  + NA  DMY KCG +     +  M+P    + L SW I+I+  
Sbjct: 585 QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI---GEVVKMLPPSVNRSLPSWNILISAL 641

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
           G HG+  +  ATF++M + GI+P  V+F+S+L ACSH GLVD+G  +++M+  +  +EP 
Sbjct: 642 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPA 701

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
           +EH  C++DLL R+G L+EA  FI  MP+ P+  +W SLL  C+IH  +    K AE++ 
Sbjct: 702 IEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLS 761

Query: 655 ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG 714
           +LEP++   YVL +N++A   +WE+V+ +R+++  + +KK   CSW+++K KV+ F  G 
Sbjct: 762 KLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD 821

Query: 715 SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
            +HP   +I + L+ ++  +K  GY   T  AL + DE +KE  L  HSE+LA+A+ +++
Sbjct: 822 RTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMS 881

Query: 775 LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            P G T+R+ KNLR+C DCH + KF+S+   R IVLRD  RFHHF+ G CSC+ +W
Sbjct: 882 TPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 221/433 (51%), Gaps = 14/433 (3%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           RVK A  LFD +  R+ VSWN M+SG +  G+  +G+E F++M +LG       + ++++
Sbjct: 7   RVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVT 66

Query: 276 GCANCGALMF-GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            C   G++   G  VH F  K+    ++  +  +L +Y   G +  + +VFE+M +R+VV
Sbjct: 67  ACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVV 126

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SWTS++ GY+ +G  +  I +++GM  EG+  +  +++ ++ +C       +G+ +   +
Sbjct: 127 SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV 186

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL-------- 446
            ++ ++S L V N+L+ M    G++  A  +F+QM  +D +SWN++  A           
Sbjct: 187 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF 246

Query: 447 -FVAMLQNF--EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
              ++++ F  E +  T++ +L     +   + GR IHG +++ G  +   V N ++ MY
Sbjct: 247 RIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 306

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
              G  V A  +F  +P KDLISW  ++A +   G   DA+     M  +G   + V+F 
Sbjct: 307 AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 366

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           S L AC      ++G     ++        ++   A +V +  + G +SE+ R +  MP 
Sbjct: 367 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVLLQMP- 424

Query: 624 APDATIWGSLLCG 636
             D   W +L+ G
Sbjct: 425 RRDVVAWNALIGG 437



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 127/527 (24%), Positives = 241/527 (45%), Gaps = 55/527 (10%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T ++N+    + + G++E++  +  L      ++++ T  ++L +   +   + G+ +H 
Sbjct: 226 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 285

Query: 121 IICESGIVIDDGVLG--SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
           ++ + G    D V+   + L+ M+   G   E   VF ++    +  WN LM  +   G 
Sbjct: 286 LVVKMGF---DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 342

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVL-KCLA-----------------------VVGNS 214
             ++L L   M S G + +  TF+  L  C                         ++GN+
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 402

Query: 215 R--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                     + ++ ++  ++  RDVV+WN +I GY  +   +K L  F+ M   G + +
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 462

Query: 267 LATMVTVLSGCANCGALM-FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
             T+V+VLS C   G L+  G+ +HA+ + A F  +    N+L+ MY+KCGDL  +  +F
Sbjct: 463 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 522

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
             +  R++++W +M+A  A  G  +  ++L   M   G+  D ++ +  L A A   +LE
Sbjct: 523 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 582

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD 445
            G+ +H    +   +   ++ NA  DMY+KCG + +   +      + + SWN +I AL 
Sbjct: 583 EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 642

Query: 446 ----------LFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADR 493
                      F  ML+   +P  VT   +L AC+    +++G   +  I R  G+    
Sbjct: 643 RHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAI 702

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAK--DLISWTIMIAGYGMHG 538
                ++D+  + G L  A +    +P K  DL+ W  ++A   +HG
Sbjct: 703 EHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV-WRSLLASCKIHG 748



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 164/340 (48%), Gaps = 22/340 (6%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MY+K G +  A  +F+ M  R+ VSW +M++G  R G++   +  FR M   GI+P  + 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 371 ITSILHACACDG-LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           I S++ AC   G +   G  VH ++ ++ + S +YVS A++ +Y   G ++ +  VF +M
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 430 PVKDIVSWNTMI------GALDLFVAMLQNFEPDGV-----TMACILPACASLAALERGR 478
           P +++VSW +++      G  +  + + +    +GV     +M+ ++ +C  L     GR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           +I G +++ G+ +   V N+++ M    G +  A  +FD +  +D ISW  + A Y  +G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
              ++   F+ MR+   E +  +  ++L    H      G     ++     ++   +  
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV-----VKMGFDSV 295

Query: 599 ACMVDLLSR----TGNLSEAYRFIEMMPVAPDATIWGSLL 634
            C+ + L R     G   EA    + MP   D   W SL+
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLM 334


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/677 (37%), Positives = 381/677 (56%), Gaps = 44/677 (6%)

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
           +G+   +Y  S +L    +      +  A  +F  + + + +SWN MI G+  +      
Sbjct: 3   IGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISA 62

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           L ++  M++LG + +  T   +   CA   A   G+ +HA  LK   + ++  + +L+ M
Sbjct: 63  LNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISM 122

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG-------------------- 351
           Y++ G ++ A +VF+    R VVS+T+MI GYA  G  D                     
Sbjct: 123 YAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMI 182

Query: 352 -----------AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
                      A+ LF  M++  ++PD   + ++L  C   G +E+G+ +H +I  +   
Sbjct: 183 SGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFG 242

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM 450
           S+L + NAL+D+Y+KCG M  A  +F  +  KD++SWNT+IG          AL +F  M
Sbjct: 243 SNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEM 302

Query: 451 LQNFE-PDGVTMACILPACASLAALERGREIHGYILR--HGISADRNVANAIVDMYVKCG 507
           L+  E P+ VTM  ILPACA L A++ GR IH YI +   GI  + ++  +++DMY KCG
Sbjct: 303 LKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCG 362

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            +  A  +FD I  K L S   MI G+ MHG    A    + M++ GIEPD+++F+ +L 
Sbjct: 363 NIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLS 422

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSH+GL D G + F  M  +  IEPKLEHY CM+DLL R+G   EA   I  M + PD 
Sbjct: 423 ACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDG 482

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            IWGSLL  C+IH  ++L E +A+ + ++EP N G YVLL+N+YA + +W++V ++R  +
Sbjct: 483 VIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLL 542

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
           + +GLKK PGCS IEI   V+ F+ G   HP  K+I  +L+ +   +   G+   T   L
Sbjct: 543 NDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVL 602

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
              +E  KE AL  HSEKLA+AFG+++   G  +R+ KNLRVC +CHE  K +SK  +RE
Sbjct: 603 QEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKRE 662

Query: 808 IVLRDSNRFHHFKDGRC 824
           I+ RD +RFHHFKDG C
Sbjct: 663 IIARDRSRFHHFKDGMC 679



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 225/458 (49%), Gaps = 54/458 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T+  + + CA  K+ ++GK++H+ I + G+ +D  V  S L+ M+   G +++  +V
Sbjct: 77  NSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTS-LISMYAQNGIVEDAHKV 135

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+   +  V  +  ++  Y+  GN  +                                 
Sbjct: 136 FDTSSHRDVVSYTAMITGYASRGNMDK--------------------------------- 162

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                A K+FDE+  +DVVSWN MISGY   G  ++ LE+F EM+ +    D +TM TVL
Sbjct: 163 -----AQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVL 217

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S C + G +  GR +H++     F   +   N L+D+YSKCG+++ A  +FE +  + V+
Sbjct: 218 STCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVI 277

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW ++I GYA       A+ +F+ M++ G  P+   + SIL ACA  G ++IG+ +H YI
Sbjct: 278 SWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 337

Query: 395 --KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------G 442
             K   + ++  +  +L+DMYAKCG++  A  VF+ +  K + S N MI           
Sbjct: 338 DKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADA 397

Query: 443 ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI-HGYILRHGISADRNVANAIV 500
           A DL   M ++  EPD +T   +L AC+     + GR+I     L + I         ++
Sbjct: 398 AFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMI 457

Query: 501 DMYVKCGVLVLARSLFD-MIPAKDLISWTIMIAGYGMH 537
           D+  + G+   A  L + M    D + W  ++    +H
Sbjct: 458 DLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIH 495



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 152/362 (41%), Gaps = 74/362 (20%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK----TYCSILQLCADLKSLEDGKKVHS 120
           ++NA I  + E+G  ++A+E+   +E  K+D K    T  ++L  C    ++E G+++HS
Sbjct: 177 SWNAMISGYAEIGRYKEALELF--NEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHS 234

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            I   G   +  ++ + L+ ++  CG+++    +F  +    V  WN L+  Y+   + K
Sbjct: 235 WIDNHGFGSNLKLVNA-LIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHK 293

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVL---------------------KCLAVVGNSR---- 215
           E+L +F++M  LG   +  T   +L                     K   ++ N+     
Sbjct: 294 EALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTS 353

Query: 216 ---------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                     ++ A+++FD + ++ + S N MI G+  +G A+   ++   M   G   D
Sbjct: 354 LIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPD 413

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             T V +LS C++ G    GR +              F +  LD            R+  
Sbjct: 414 DITFVGLLSACSHAGLSDLGRKI--------------FKSMTLDY-----------RI-- 446

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
              E  +  +  MI    R G+F  A  L   M    +EPD     S+L AC     LE+
Sbjct: 447 ---EPKLEHYGCMIDLLGRSGLFKEAEELINSMT---MEPDGVIWGSLLKACKIHKNLEL 500

Query: 387 GK 388
           G+
Sbjct: 501 GE 502


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 268/771 (34%), Positives = 404/771 (52%), Gaps = 55/771 (7%)

Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-------DNG 161
            +SLE  +K   +  E   ++    + S L+  F  CG   +   VF ++       DN 
Sbjct: 81  FESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDN- 139

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
             F +  ++   +K+    E   +   +  +G   D +  + ++      G    +    
Sbjct: 140 --FTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIH---FYGECGEIDCMR 194

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           ++FD++S+R+VVSW  +I GY   G  ++ + +F EM+ +G   +  TMV V+S CA   
Sbjct: 195 RVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQ 254

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            L  G  V     +          N L+DMY KCG +D A ++F++  ++++V + ++++
Sbjct: 255 DLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMS 314

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
            Y R+G+    + +   M++ G  PD   + S + AC+    +  GK  H Y+  N ++ 
Sbjct: 315 NYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEG 374

Query: 402 SLYVSNALMDMYAKCG-------------------------------SMADAESVFNQMP 430
              V NA+++MY KCG                                M  A  +F+ MP
Sbjct: 375 WDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMP 434

Query: 431 VKDIVSWNTMIGAL----------DLFVAML-QNFEPDGVTMACILPACASLAALERGRE 479
             D+VSWNTMIGAL          +LF  M  +    D VTM  +  AC  L AL+  + 
Sbjct: 435 DSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKW 494

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           IHGYI +  I  D ++  A+VDM+ +CG    A  +F+ +  +D+ +WT  I    M G 
Sbjct: 495 IHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGN 554

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
           G  AI  F++M Q GI+PD V F+++L A SH GLV++GW  F  M+    I P+  HY 
Sbjct: 555 GTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYG 614

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           CMVDLL R G LSEA   I  M + P+  IWGSLL  CR+H  V +A   AE + EL+P+
Sbjct: 615 CMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPE 674

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
            TG +VLL+N+YA A +W++V K+R  +  +G  K PG S IEI GK+  F  G  SHP 
Sbjct: 675 RTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPE 734

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
              IE +LK +   ++  GY P     L++ +E EKE  L  HSEKLA+AF +++   G 
Sbjct: 735 MTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGM 794

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            IRV KNLR+C DCH  AK +SK+  REI++RD+NRFH F+ G CSC  +W
Sbjct: 795 PIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 155/556 (27%), Positives = 269/556 (48%), Gaps = 57/556 (10%)

Query: 168 LLMHEYSKTGNFKE--SLYLFKKMQSL----GIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
           L  H  S TG+FK+  ++   K++ S     G+     + + ++     +G    ++ A 
Sbjct: 29  LTKHRSSPTGSFKKCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQ 88

Query: 222 KLFDE-LSDRDVVS----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           K  +  + D  ++     ++ +I G+ A G+  K + VF++++ +G   D  T   VLS 
Sbjct: 89  KALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSA 148

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C    AL  G  VH   +K  F +++   N+L+  Y +CG++D   RVF+KM ER+VVSW
Sbjct: 149 CTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSW 208

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           TS+I GYA+ G +  A+ LF  MV  GI P+   +  ++ ACA    L++G+ V   I E
Sbjct: 209 TSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGE 268

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
            +++ +  + NAL+DMY KCG++  A  +F++   K++V +NT++            L +
Sbjct: 269 LELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAV 328

Query: 447 FVAMLQNF-EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
              ML++   PD +TM   + AC+ L  +  G+  HGY+LR+G+    NV NAI++MY+K
Sbjct: 329 LGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMK 388

Query: 506 CGVLVLARSLFD-------------------------------MIPAKDLISWTIMIAGY 534
           CG   +A  +FD                                +P  DL+SW  MI   
Sbjct: 389 CGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGAL 448

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
                  +AI  F  M+  GI  D+V+ + V  AC + G +D        ++ + +I   
Sbjct: 449 VQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKK-DIHFD 507

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
           +     +VD+ +R G+   A +    M V  D + W + +    +      A ++ + + 
Sbjct: 508 MHLGTALVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGNGTGAIELFDEML 566

Query: 655 E--LEPDNTGYYVLLA 668
           +  ++PD   +  LL 
Sbjct: 567 QQGIKPDGVVFVALLT 582



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 257/554 (46%), Gaps = 84/554 (15%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  +L  C    +L +G +VH  I + G   D  V  S L+  +  CG++   RRV
Sbjct: 138 DNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENS-LIHFYGECGEIDCMRRV 196

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+K+    V  W  L+  Y+K G +KE++ LF +M  +GI  +S T   V+   A + + 
Sbjct: 197 FDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDL 256

Query: 215 R--------------------------------RVKDAHKLFDELSDRDVVSWNCMISGY 242
           +                                 +  A K+FDE  D+++V +N ++S Y
Sbjct: 257 QLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNY 316

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           +  G+A + L V  EML  G   D  TM++ +S C+    +  G+  H + L+       
Sbjct: 317 VRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWD 376

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG--------------- 347
           +  N +++MY KCG  + A RVF++M  ++ VSW S+IAG+ R G               
Sbjct: 377 NVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDS 436

Query: 348 ----------------VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
                           +F  AI LFR M  EGI  D   +  +  AC   G L++ K +H
Sbjct: 437 DLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIH 496

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL------- 444
            YIK+ D+   +++  AL+DM+A+CG    A  VFN+M  +D+ +W   IGA+       
Sbjct: 497 GYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGT 556

Query: 445 ---DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAI 499
              +LF  MLQ   +PDGV    +L A +    +E+G  I   +   +GI+        +
Sbjct: 557 GAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCM 616

Query: 500 VDMYVKCGVLVLARSLFD--MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           VD+  + G+L  A SL +   +   D+I W  ++A   +H    D IA +   R + ++P
Sbjct: 617 VDLLGRAGLLSEALSLINSMQMEPNDVI-WGSLLAACRVHK-NVD-IAAYAAERISELDP 673

Query: 558 DEVS---FISVLYA 568
           +       +S +YA
Sbjct: 674 ERTGIHVLLSNIYA 687



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 179/391 (45%), Gaps = 48/391 (12%)

Query: 61  CKTKN---YNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDG 115
           C  KN   YN  +  +   G   + + VL    K   + D  T  S +  C++L  +  G
Sbjct: 301 CVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCG 360

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           K  H  +  +G+   D V  + ++ M++ CG  +   RVF+++ N     WN L+  + +
Sbjct: 361 KWCHGYVLRNGLEGWDNVCNA-IINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVR 419

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSW 235
            G+ + +  +F  M                                       D D+VSW
Sbjct: 420 NGDMESAWKIFSAM--------------------------------------PDSDLVSW 441

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N MI   +   + ++ +E+F+ M + G   D  TMV V S C   GAL   + +H +  K
Sbjct: 442 NTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKK 501

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
                ++     L+DM+++CGD   A++VF KM +R V +WT+ I   A EG   GAI L
Sbjct: 502 KDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIEL 561

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYA 414
           F  M+++GI+PD     ++L A +  GL+E G  +   +K+   +         ++D+  
Sbjct: 562 FDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLG 621

Query: 415 KCGSMADAESVFN--QMPVKDIVSWNTMIGA 443
           + G +++A S+ N  QM   D++ W +++ A
Sbjct: 622 RAGLLSEALSLINSMQMEPNDVI-WGSLLAA 651


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 275/820 (33%), Positives = 408/820 (49%), Gaps = 143/820 (17%)

Query: 146  GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
            G ++E R VF  +    V  WN ++  Y + G+ K +  LF +M    +A+ +   +   
Sbjct: 247  GRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYC 306

Query: 206  KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
             C        R+ +A +LFD++ +R+ VSW  MISGY+      +  +VF +M       
Sbjct: 307  HCY-------RMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARP 359

Query: 266  DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK----------- 314
            D +  V VLS       L    ++   A+K  +  ++   + +L+ Y++           
Sbjct: 360  DQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFF 419

Query: 315  --------------------CGDLDGAIRVFEKMGERSV--------------------- 333
                                CG LD AI+++E++ E++V                     
Sbjct: 420  ETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARL 479

Query: 334  ----------VSWTSMIAGYAREGVFDGAIRLFRGMV--------------------REG 363
                      V+W ++IAGY + G+   A  LF+ M                     RE 
Sbjct: 480  IFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREA 539

Query: 364  IE-----------PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
            +E           P   + TS L ACA  G +EIG+ +H    +   Q + YV N L+ M
Sbjct: 540  LELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISM 599

Query: 413  YAKCGSMADAESVFNQMPVKDIVSWNTMIG------------------------------ 442
            YAKCG++ D   VF  + VKD VSWN++I                               
Sbjct: 600  YAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAII 659

Query: 443  -----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                       ALDLF+ ML +  +P+ +T+  +L AC +L A++ G + H  I + G  
Sbjct: 660  SAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFD 719

Query: 491  ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
                V N+++ MY KCG       +F+ +P  DLI+W  ++ G   +G G +AI  F  M
Sbjct: 720  TFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQM 778

Query: 551  RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
               GI PD++SF+ VL ACSH+GLVDEGW  FN M  +  I P + HY CMVDLL R G 
Sbjct: 779  EVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGY 838

Query: 611  LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
            LSEA   IE MPV PD+ IW +LL  CRIH  V+L ++VAE +F++    +  YVLL+N+
Sbjct: 839  LSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNL 898

Query: 671  YAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL 730
            +A    W++V ++R+ +  +GL K PG SWI++K K++ FV G  +H   ++I S LK  
Sbjct: 899  FASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEY 958

Query: 731  RLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVC 790
                +  GY P T + L + +E +K+  L  HSEKLA+ FGIL+ P G  I++ KNLR+C
Sbjct: 959  YGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRIC 1018

Query: 791  GDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            GDCH   KFMSK   R+I++RD NRFHHF+DG CSC  +W
Sbjct: 1019 GDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 239/521 (45%), Gaps = 84/521 (16%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           ++ D   +  +L     L  LE    +  I  ++G    D V+GS ++  +   G L   
Sbjct: 357 ARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYE-GDVVVGSAILNAYTRNGSLDLA 415

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
              F  +     + W  ++  +++ G   +++ L++++    +A    T + ++   A V
Sbjct: 416 MHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQV 471

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM----------LNL 261
           G   R++ A  +FDE+ + +VV+WN +I+GY  NG+ ++  ++F++M          +  
Sbjct: 472 G---RIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIA 528

Query: 262 GFN------------VDL---------ATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GF             ++L         ++  + LS CAN G +  GR +H+ A+K     
Sbjct: 529 GFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQF 588

Query: 301 EISFNNTLLDMYSKCGD-------------------------------LDGAIRVFEKMG 329
                N L+ MY+KCG+                               LD A  VFEKM 
Sbjct: 589 NSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMP 648

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           +R VVSWT++I+ Y + G  + A+ LF  M+  GI+P+   +TS+L AC   G +++G+ 
Sbjct: 649 KRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQ 708

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-------- 441
            H  I +    + L+V N+L+ MY KCG   D   VF +MP  D+++WN ++        
Sbjct: 709 FHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGL 767

Query: 442 --GALDLFVAM-LQNFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVAN 497
              A+ +F  M ++   PD ++   +L AC+    ++ G    +    ++GI        
Sbjct: 768 GKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYT 827

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
            +VD+  + G L  A +L + +P K D + W  ++    +H
Sbjct: 828 CMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIH 868



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 163/687 (23%), Positives = 294/687 (42%), Gaps = 86/687 (12%)

Query: 28  SYKPSTLPIIVSSKSH----SSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAM 83
           S KP  +P++++ K +    S   I  + +     +   ++  N    R+  V +L    
Sbjct: 67  SLKPCAIPVLLTPKKNACDASHVGIGGVLSQEGHPIAFFSEKLNNTRRRYSRVYSLYSHD 126

Query: 84  EVLYSSEKSKIDTK-----TYCSILQLCADLKSLEDGK---KVHSIICESGIVIDDGVLG 135
            + + + +SK++T+      Y    +     KS    K   + H   C + I      LG
Sbjct: 127 SLKHLTSQSKLNTRHARWMDYLQQFKFVIRHKSGAKNKETPQTHLFQCNTRI----QELG 182

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
                     G ++E RRVFN++    V  WN +++ YS+ G   E+  LF       + 
Sbjct: 183 R--------LGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF----VG 230

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
            +  T++ +L   A  G   R+++A ++F+ +++R+VVSWN MISGY+ NG  +   ++F
Sbjct: 231 KNIRTWTILLTGYAKEG---RIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLF 287

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
            EM                                         K ++  N+++  Y  C
Sbjct: 288 DEMP---------------------------------------EKNVASWNSVVTGYCHC 308

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
             +  A  +F++M ER+ VSW  MI+GY     +  A  +F  M R    PD      +L
Sbjct: 309 YRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVL 368

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            A      LE+   +     +   +  + V +A+++ Y + GS+  A   F  MP ++  
Sbjct: 369 SAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEY 428

Query: 436 SWNTMI------GALDLFVAMLQNFEPDGV-TMACILPACASLAALERGREIHGYILRHG 488
           SW TMI      G LD  + + +      V T   ++ A A +  +++ R I   IL   
Sbjct: 429 SWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPN 488

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
           + A     NAI+  Y + G+L  A+ LF  +P K+  SW  MIAG+  +    +A+    
Sbjct: 489 VVA----WNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLI 544

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
           ++ ++G  P + SF S L AC++ G V+ G R  + +  +   +        ++ + ++ 
Sbjct: 545 ELHRSGSVPSDSSFTSALSACANIGDVEIG-RVIHSLAIKTGCQFNSYVMNGLISMYAKC 603

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           GN+ +       + V  D   W SL+ G   ++ +  A  V E   ++   +   +  + 
Sbjct: 604 GNVEDGSHVFRTIRVK-DTVSWNSLISGLSENYMLDDARVVFE---KMPKRDVVSWTAII 659

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKN 695
           + Y +A   E    L   +  RG+K N
Sbjct: 660 SAYVQAGHGEVALDLFLDMLARGIKPN 686



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 215/467 (46%), Gaps = 54/467 (11%)

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSK--IDTKTYCSILQLCADLKSLE 113
            K  V  + ++ A I  F +     +A+E+L    +S       ++ S L  CA++  +E
Sbjct: 513 QKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVE 572

Query: 114 DGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
            G+ +HS+  ++G   +  V+   L+ M+  CG++++G  VF  I       WN L+   
Sbjct: 573 IGRVIHSLAIKTGCQFNSYVMNG-LISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGL 631

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVV 233
           S+        Y+                               + DA  +F+++  RDVV
Sbjct: 632 SEN-------YM-------------------------------LDDARVVFEKMPKRDVV 653

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           SW  +IS Y+  G  E  L++F +ML  G   +  T+ ++LS C N GA+  G   HA  
Sbjct: 654 SWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALI 713

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
            K  F   +   N+L+ MY KCG  DG   VFE+M E  +++W +++ G A+ G+   AI
Sbjct: 714 FKLGFDTFLFVGNSLITMYFKCGYEDGFC-VFEEMPEHDLITWNAVLVGCAQNGLGKEAI 772

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDM 412
           ++F  M  EGI PD  +   +L AC+  GL++ G    +   ++  +   +Y    ++D+
Sbjct: 773 KIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDL 832

Query: 413 YAKCGSMADAESVFNQMPVK-DIVSWNTMIGA--------LDLFVA--MLQNFEPDGVTM 461
             + G +++AE++   MPVK D V W  ++GA        L   VA  + Q  +P   T 
Sbjct: 833 LGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATY 892

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
             +    AS    ++  EI   +   G++ +  ++   V   + C V
Sbjct: 893 VLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFV 939


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 269/735 (36%), Positives = 402/735 (54%), Gaps = 61/735 (8%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           ++ +   +  G + +  R+F  +       +N ++  Y+  G   ++L  F+ +      
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR---- 166

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
            DS++++ +L  L V   S  + D   LFDE+  +D VS+N MIS +  +G+    + + 
Sbjct: 167 PDSFSYNTLLHALGV---SSSLADVRALFDEMPVKDSVSYNVMISSHANHGL----VSLA 219

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
           +   +L    D  +   +L+     G +   R +  F  +  +   IS+N  L+  Y + 
Sbjct: 220 RHYFDLAPEKDAVSWNGMLAAYVRNGRIQEAREL--FDSRTEWDA-ISWN-ALMAGYVQR 275

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP--DVYAITS 373
             ++ A ++F KM +R VVSW +M++GYAR G    A RLF       + P  DV+  T+
Sbjct: 276 SQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLF------DVAPIRDVFTWTA 329

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQS-----SLYVS---------------------- 406
           I+   A +G+LE  K V D + + +  S     + YV                       
Sbjct: 330 IVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASW 389

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQNFE- 455
           N ++  YA+ G + +A ++F  MP KD VSW  M+ A          L LF  M +  E 
Sbjct: 390 NTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEW 449

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
            +    AC+L  CA +AALE G ++H  +++ G      V NA++ MY KCG +  A S 
Sbjct: 450 VNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSA 509

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           F+ +  +D++SW  MIAGY  HGFG +A+  F+ MR+   +PD+++ + VL ACSHSGLV
Sbjct: 510 FEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLV 569

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           ++G  +F  M  +  +  K EHY CM+DLL R G L EA   ++ MP  PD+T+WG+LL 
Sbjct: 570 EKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLG 629

Query: 636 GCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
             RIH   +L    AE +FELEP+N G YVLL+N+YA + KW +V K+R  +  RG+KK 
Sbjct: 630 ASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKV 689

Query: 696 PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEK 755
           PG SWIE++ KV+ F  G S HP  + I + L+ L + MK+ GY   T   L + +E EK
Sbjct: 690 PGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEK 749

Query: 756 EVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNR 815
           E  L  HSEKLA+A+GIL +P G+ IRV KNLRVC DCH   K +S    R I+LRDSNR
Sbjct: 750 EHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNR 809

Query: 816 FHHFKDGRCSCRGFW 830
           FHHF+DG CSC  +W
Sbjct: 810 FHHFRDGSCSCGDYW 824



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 148/573 (25%), Positives = 252/573 (43%), Gaps = 79/573 (13%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLC------ADLKSLEDGK 116
           T  YN  +  +   G L +A+    S  +   D+ +Y ++L         AD+++L D  
Sbjct: 138 TSTYNTMLAGYAANGRLPQALSFFRSIPRP--DSFSYNTLLHALGVSSSLADVRALFDEM 195

Query: 117 KV---------------HSIICESGIVID-----DGVLGSKLVFMFVTCGDLKEGRRVFN 156
            V               H ++  +    D     D V  + ++  +V  G ++E R +F+
Sbjct: 196 PVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFD 255

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
                    WN LM  Y +    +E+  +F KM       D  +++ ++   A  G+   
Sbjct: 256 SRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQ----RDVVSWNTMVSGYARRGD--- 308

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN---LGFNVDLATMVTV 273
           + +A +LFD    RDV +W  ++SGY  NG+ E+   VF  M +   + +N  +A  V  
Sbjct: 309 MAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQ- 367

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
                     M   A   F    C  + ++  NT+L  Y++ G LD A  +F  M ++  
Sbjct: 368 --------RRMMEEAKELFDAMPC--RNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDA 417

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSW +M+A Y++ G  +  ++LF+ M R G   +  A   +L  CA    LE G  +H  
Sbjct: 418 VSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSR 477

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           + +       +V NAL+ MY KCGSM +A S F +M  +D+VSWNTMI           A
Sbjct: 478 LIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEA 537

Query: 444 LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIVD 501
           L++F  M + + +PD +T+  +L AC+    +E+G      + R  G++        ++D
Sbjct: 538 LEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMID 597

Query: 502 MYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH---GFGCDAIATFNDMRQAGIEP 557
           +  + G L  A +L   +P   D   W  ++    +H     G +A     +     +EP
Sbjct: 598 LLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFE-----LEP 652

Query: 558 DEVS---FISVLYACSHSGLVDEGWRFFNMMRY 587
           +       +S +YA S        WR  + MR+
Sbjct: 653 ENAGMYVLLSNIYASSGK------WRDVDKMRH 679



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 158/348 (45%), Gaps = 39/348 (11%)

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           E+   N  +  + + G +  A R+F  M  RS  ++ +M+AGYA  G    A+  FR + 
Sbjct: 106 EVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP 165

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           R    PD ++  ++LHA      L    DV     E  ++ S+   N ++  +A  G ++
Sbjct: 166 R----PDSFSYNTLLHALGVSSSL---ADVRALFDEMPVKDSVSY-NVMISSHANHGLVS 217

Query: 421 DAESVFNQMPVKDIVSWNTMIGAL----------DLFVAMLQNFEPDGVTMACILPACAS 470
            A   F+  P KD VSWN M+ A           +LF +     E D ++   ++     
Sbjct: 218 LARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDS---RTEWDAISWNALMAGYVQ 274

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
            + +E  +++   + +  + +     N +V  Y + G +  AR LFD+ P +D+ +WT +
Sbjct: 275 RSQIEEAQKMFNKMPQRDVVS----WNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAI 330

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDE--VSFISVLYACSHSGLVDEGWRFFNMMRYE 588
           ++GY  +G   +A   F+ M      PD+  VS+ +++ A     +++E    F+ M   
Sbjct: 331 VSGYAQNGMLEEAKRVFDAM------PDKNAVSWNAMMAAYVQRRMMEEAKELFDAM--P 382

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           C     +  +  M+   ++ G L EA     MMP   DA  W ++L  
Sbjct: 383 CR---NVASWNTMLTGYAQAGMLDEARAIFGMMP-QKDAVSWAAMLAA 426


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/798 (33%), Positives = 417/798 (52%), Gaps = 53/798 (6%)

Query: 82  AMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI---VIDDGVLGSKL 138
           A  +L  S  +   + T C+   L A   S E   +      E G    +   G     L
Sbjct: 2   ATPLLLPSRAAHAASATTCASQHLTA-ATSKEPPPRTRPKHGEGGASRPISSSGSRPKSL 60

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS 198
           +   V  G + E    F  +     F+ N+++  ++      ++L  ++ M   G   D 
Sbjct: 61  ILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDR 120

Query: 199 YTFSCVLKCLA---VVGNSRR-----------------------------VKDAHKLFDE 226
           +TF  VLKC A    +G  R                              V DA ++FD 
Sbjct: 121 FTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDG 180

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN-LGFNVDLATMVTVLSGCANCGALMF 285
           +  RD+VSWN M+ GY++NG+    L  F+EM + L    D   ++  L+ C    AL  
Sbjct: 181 MPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALAL 240

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           GR +H +A++    +++    +L+DMY KCG++  A  VF KM  R+VV+W  MI GYA 
Sbjct: 241 GREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYAL 300

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
                 A   F  M  +G + +V    ++L ACA       G+ VH Y+        + +
Sbjct: 301 NERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVL 360

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNF 454
             AL++MY K G +  +E +F Q+  K +VSWN MI A          + LF+ +L Q  
Sbjct: 361 ETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPL 420

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            PD  TM  ++PA   L ++ + +++H YI++ G      + NA++ MY +CG +V +R 
Sbjct: 421 YPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASRE 480

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +FD +P KD+ISW  +I GY +HG G  A+  F++M+ +G+EP+E +F+SVL ACS SGL
Sbjct: 481 IFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGL 540

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
             EGW+ FN M+ E  + P++EHY CM DLL R G L E  RFIE MP+AP + IWGSLL
Sbjct: 541 EAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLL 600

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
              R  +++ +AE  AE +F+LE +NTG YV+L+++YA+A +WE+V+++R  +  +GL++
Sbjct: 601 TASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRR 660

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
               S +E+  K   FV G  SHP ++KI      L    +  G    +   L ++D   
Sbjct: 661 TEARSLVELNNKECSFVNGDMSHPQSEKIHEFSDILS---RNIGEDLDSSSNLRDSDPFA 717

Query: 755 KEVALCG--HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRD 812
               +    HS +LA+AFG+++  AG  + V KN+RVC  CH   K +SK + R+IV+ D
Sbjct: 718 SSTTVLPNKHSVRLAVAFGLISSEAGSPVLVKKNVRVCNHCHHALKLISKYSGRKIVVGD 777

Query: 813 SNRFHHFKDGRCSCRGFW 830
           +  +H F DG C C  +W
Sbjct: 778 TKIYHIFSDGSCCCGDYW 795


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 225/568 (39%), Positives = 353/568 (62%), Gaps = 12/568 (2%)

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           ++ CA    L   R +H     + F  +   +N+L+ +Y KCG +  A +VF+KM ++ +
Sbjct: 58  ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDM 117

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSWTS+IAGYA+  +   AI L  GM++   +P+ +   S+L A        IG  +H  
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHAL 177

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
             + D    +YV +AL+DMYA+CG M  A +VF+++  K+ VSWN +I           A
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 444 LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           L +F  M +N FE    T + I    A + ALE+G+ +H ++++        V N ++DM
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDM 297

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y K G ++ AR +F+ +  KDL++W  M+  +  +G G +A++ F +MR++GI  ++++F
Sbjct: 298 YAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITF 357

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           + +L ACSH GLV EG  +F+M++ E N+EP++EHY  +VDLL R G L+ A  FI  MP
Sbjct: 358 LCILTACSHGGLVKEGKHYFDMIK-EYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMP 416

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + P A +WG+LL  CR+H   K+ +  A+HVF+L+PD++G  VLL N+YA    W+   +
Sbjct: 417 MEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAAR 476

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R+ +   G+KK P CSW+EI   V++FVA   +HP A++I  +   + +++++EGY P 
Sbjct: 477 VRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPD 536

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
             Y L++ DE E+E  L  HSEK+A+AF ++ +PAG TIR+ KN+R+CGDCH   K++SK
Sbjct: 537 MDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISK 596

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REIV+RD+NRFHHF +G CSC  +W
Sbjct: 597 VFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 193/383 (50%), Gaps = 15/383 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V +AHK+FD++  +D+VSW  +I+GY  N +  + + +   ML   F  +  T  ++L  
Sbjct: 102 VVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
                    G  +HA A+K  + +++   + LLDMY++CG +D A  VF+K+  ++ VSW
Sbjct: 162 AGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSW 221

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++I+G+AR+G  + A+ +F  M R G E   +  +SI    A  G LE GK VH ++ +
Sbjct: 222 NALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVK 281

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLF------VAM 450
           +  + + +V N ++DMYAK GSM DA  VF ++  KD+V+WN+M+ A   +      V+ 
Sbjct: 282 SRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSH 341

Query: 451 LQNFEPDG-----VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
            +     G     +T  CIL AC+    ++ G+     I  + +  +      +VD+  +
Sbjct: 342 FEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGR 401

Query: 506 CGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
            G+L  A      +P +   + W  ++A   MH      +  F       ++PD+     
Sbjct: 402 AGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNA--KVGQFAADHVFQLDPDDSGPPV 459

Query: 565 VLYAC-SHSGLVDEGWRFFNMMR 586
           +LY   + +G  D   R   MM+
Sbjct: 460 LLYNIYASTGHWDAAARVRKMMK 482



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 175/380 (46%), Gaps = 34/380 (8%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + Y + +  CA  K+L+D +K+H  +  S     D  L + L+ ++  CG + E  +VF+
Sbjct: 52  RVYHAFITACAQSKNLDDARKIHGHLASSRFE-GDAFLDNSLIHLYCKCGSVVEAHKVFD 110

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           K+    +  W  L+  Y++     E++ L   M       + +TF+ +LK      +S  
Sbjct: 111 KMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGI 170

Query: 217 VKDAHKL--------------------------------FDELSDRDVVSWNCMISGYIA 244
               H L                                FD+L  ++ VSWN +ISG+  
Sbjct: 171 GGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFAR 230

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G  E  L VF EM   GF     T  ++ SG A  GAL  G+ VHA  +K+        
Sbjct: 231 KGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFV 290

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            NT+LDMY+K G +  A +VFE++  + +V+W SM+  +A+ G+   A+  F  M + GI
Sbjct: 291 GNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGI 350

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
             +      IL AC+  GL++ GK   D IKE +++  +     ++D+  + G +  A  
Sbjct: 351 YLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALV 410

Query: 425 VFNQMPVKDIVS-WNTMIGA 443
              +MP++   + W  ++ A
Sbjct: 411 FIFKMPMEPTAAVWGALLAA 430



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 151/281 (53%), Gaps = 17/281 (6%)

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P VY   + + ACA    L+  + +H ++  +  +   ++ N+L+ +Y KCGS+ +A  V
Sbjct: 51  PRVY--HAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAAL 474
           F++M  KD+VSW ++I           A+ L   ML+  F+P+G T A +L A  + A  
Sbjct: 109 FDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
             G +IH   ++     D  V +A++DMY +CG + +A ++FD + +K+ +SW  +I+G+
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG-WRFFNMMRYECNIEP 593
              G G  A+  F +M++ G E    ++ S+    +  G +++G W   +M++    +  
Sbjct: 229 ARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTA 288

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
            + +   M+D+ +++G++ +A +  E + +  D   W S+L
Sbjct: 289 FVGN--TMLDMYAKSGSMIDARKVFERV-LNKDLVTWNSML 326



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/370 (21%), Positives = 155/370 (41%), Gaps = 79/370 (21%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ S+L+          G ++H++  +     +D  +GS L+ M+  CG +     VF+K
Sbjct: 154 TFASLLKAAGAYADSGIGGQIHALAVKCDWH-EDVYVGSALLDMYARCGKMDMATAVFDK 212

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +D+     WN L+  +++ G+ + +L +F +MQ  G  A  +T+S +   LA +G   + 
Sbjct: 213 LDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQG 272

Query: 218 K--------------------------------DAHKLFDELSDRDVVSWNCMISGYIAN 245
           K                                DA K+F+ + ++D+V+WN M++ +   
Sbjct: 273 KWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQY 332

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
           G+ ++ +  F+EM   G  ++  T + +L+ C++ G +  G+       +     EI   
Sbjct: 333 GLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHY 392

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG---------------------- 342
            T++D+  + G L+ A+    KM  E +   W +++A                       
Sbjct: 393 VTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDP 452

Query: 343 ------------YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
                       YA  G +D A R+ + M   G++ +         AC+    +EIG  V
Sbjct: 453 DDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEP--------ACS---WVEIGNSV 501

Query: 391 HDYIKENDMQ 400
           H ++  +D  
Sbjct: 502 HMFVANDDTH 511


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/807 (31%), Positives = 437/807 (54%), Gaps = 53/807 (6%)

Query: 73   FCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
            + + G  E+ +++  S   E  + +  +   ++  C  LK    G+++   + +SG+   
Sbjct: 236  YSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESK 295

Query: 131  DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
              V  S L+ MF   G++     +FN+I       WN ++  Y++ G+ +ES  +F  M+
Sbjct: 296  LAVENS-LISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMR 354

Query: 191  SLGIAADSYTFSCVLKCLAVVGNSR--------------------------------RVK 218
                  +S T S +L  L  V + +                                R +
Sbjct: 355  RFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSE 414

Query: 219  DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
            +A  +F ++  +D++SWN +++ ++ +G +   L +   M+  G +V+  T  + L+ C 
Sbjct: 415  EADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACF 474

Query: 279  NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
            +      GR +H   + +         N L+ MY K G +  + RV  +M  R VV+W +
Sbjct: 475  SPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNA 534

Query: 339  MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG-LLEIGKDVHDYIKEN 397
            +I GYA     D A+  F+ +  EG+  +   + S+L AC   G LLE GK +H YI   
Sbjct: 535  LIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSA 594

Query: 398  DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA---------LDLFV 448
              +S  +V N+L+ MYAKCG ++ ++ +FN +  + I++WN ++ A         +   V
Sbjct: 595  GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLV 654

Query: 449  AMLQNF--EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
            + +++F    D  + +  L A A LA LE G+++HG  ++ G   D  + NA  DMY KC
Sbjct: 655  SKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKC 714

Query: 507  GVLVLARSLFDMIPA---KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            G +     +  M+P    + L SW I+I+  G HG+  +   TF++M + GI+P  V+F+
Sbjct: 715  GEI---GEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFV 771

Query: 564  SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            S+L ACSH GLVD+G  +++M+  +  +EP +EH  C++DLL R+G L+EA  FI  MP+
Sbjct: 772  SLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPM 831

Query: 624  APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
             P+  +W SLL  C+IH ++    K AE++ +LEP++   +VL +N++A   +WE+V+ +
Sbjct: 832  KPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENV 891

Query: 684  REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
            R+++  + +KK   CSW+++K KV+ F  G  +HP   +I + L+ ++  +K  GY   T
Sbjct: 892  RKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADT 951

Query: 744  RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              AL + DE +KE  L  HSE+LA+A+ +++ P G T+R+ KNLR+C DCH + KF+S+ 
Sbjct: 952  SQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRV 1011

Query: 804  ARREIVLRDSNRFHHFKDGRCSCRGFW 830
              R IVLRD  RFHHF+ G CSC+ +W
Sbjct: 1012 IGRRIVLRDQYRFHHFESGLCSCKDYW 1038



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/544 (25%), Positives = 258/544 (47%), Gaps = 45/544 (8%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           G+ +H++ C  G+V    +  + L+ M+   G +K  R +F+K+       WN +M    
Sbjct: 77  GRALHAL-CVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIV 135

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------------------ 216
           + G + E +  F+KM  LGI   S+  + ++      G+  R                  
Sbjct: 136 RVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 195

Query: 217 ---------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                          V  + K+F+E+ DR+VVSW  ++ GY   G  E+ ++++K M   
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGE 255

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G   +  +M  V+S C        GR +    +K+    +++  N+L+ M+   G++D A
Sbjct: 256 GVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYA 315

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F ++ ER  +SW S++A YA+ G  + + R+F  M R   E +   ++++L      
Sbjct: 316 NYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDV 375

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
              + G+ +H  + +    S + V N L+ MYA  G   +A+ VF QMP KD++SWN+++
Sbjct: 376 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLM 435

Query: 442 G----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      AL +  +M++  +  + VT    L AC S    ++GR +HG ++  G+ 
Sbjct: 436 ASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLF 495

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
            ++ + NA+V MY K G +  +R +   +P +D+++W  +I GY  +     A+A F  +
Sbjct: 496 DNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTL 555

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
           R  G+  + ++ +SVL AC   G + E  +  +        E        ++ + ++ G+
Sbjct: 556 RVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 615

Query: 611 LSEA 614
           LS +
Sbjct: 616 LSSS 619



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 222/433 (51%), Gaps = 14/433 (3%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           RVK A  LFD++  R+ VSWN M+SG +  G+  +G+E F++M +LG       + ++++
Sbjct: 108 RVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVT 167

Query: 276 GCANCGALMF-GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            C   G++   G  VH F  K+    ++  +  +L +Y   G +  + +VFE+M +R+VV
Sbjct: 168 ACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVV 227

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SWTS++ GY+ +G  +  I +++ M  EG+E +  +++ ++ +C       +G+ +   +
Sbjct: 228 SWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQV 287

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---------D 445
            ++ ++S L V N+L+ M+   G++  A  +FNQ+  +D +SWN+++ A           
Sbjct: 288 IKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESS 347

Query: 446 LFVAMLQNF--EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
               +++ F  E +  T++ +L     +   + GR IHG +++ G  +   V N ++ MY
Sbjct: 348 RIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 407

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
              G    A  +F  +P KDLISW  ++A +   G   DA+     M + G   + V+F 
Sbjct: 408 AGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFT 467

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           S L AC      D+G     ++      + ++   A +V +  + G +S + R +  MP 
Sbjct: 468 SALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNA-LVSMYGKIGGMSTSRRVLLQMP- 525

Query: 624 APDATIWGSLLCG 636
             D   W +L+ G
Sbjct: 526 RRDVVAWNALIGG 538



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 186/365 (50%), Gaps = 22/365 (6%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           GRA+HA  +K      +   NTL++MY+K G +  A  +F+KM  R+ VSW +M++G  R
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG-LLEIGKDVHDYIKENDMQSSLY 404
            G++   +  F+ M   GI+P  + I S++ AC   G +   G  VH ++ ++ + S +Y
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT-MIG---------ALDLFVAML-QN 453
           VS A++ +Y   G ++ +  VF +MP +++VSW + M+G          +D++ +M  + 
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
            E +  +M+ ++ +C  L     GR+I G +++ G+ +   V N+++ M+   G +  A 
Sbjct: 257 VECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYAN 316

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
            +F+ I  +D ISW  ++A Y  +G   ++   FN MR+     DEV+  +V    S  G
Sbjct: 317 YIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRF---HDEVNSTTVSTLLSVLG 373

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR----TGNLSEAYRFIEMMPVAPDATI 629
            VD   + +    +   ++   +   C+ + L R     G   EA    + MP   D   
Sbjct: 374 DVDH--QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMP-TKDLIS 430

Query: 630 WGSLL 634
           W SL+
Sbjct: 431 WNSLM 435


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 257/781 (32%), Positives = 415/781 (53%), Gaps = 44/781 (5%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHS-IICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           +D+      LQ C        G+ VH  ++   G+   D    + L+ M+   G L   R
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------ 206
           R+F+++    +  +  L+  +++ G+F+ +  LF++++  G   + +  + +LK      
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176

Query: 207 ----------CLAVVGNSRR----------------VKDAHKLFDELSDRDVVSWNCMIS 240
                     C   +G+                   V DA  +F+ +  +D V W  M+S
Sbjct: 177 AAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS 236

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
            Y  N   E    VF +M   G   +   + +VL       +++ G+ +H  A+K     
Sbjct: 237 CYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDT 296

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           E      LLDMY+KCGD+  A   FE +    V+  + MI+ YA+    + A  LF  ++
Sbjct: 297 EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLM 356

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           R  + P+ Y+++S+L AC     L+ GK +H++  +   +S L+V NALMD YAKC  M 
Sbjct: 357 RSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMD 416

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFEP-DGVTMACILPACA 469
            +  +F+ +   + VSWNT++           AL +F  M     P   VT + +L ACA
Sbjct: 417 SSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACA 476

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           S A++    +IH  I +   + D  + N+++D Y KCG +  A  +F  +  +D+ISW  
Sbjct: 477 STASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNA 536

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           +I+GY +HG   DA+  F+ M ++ +E ++++F+++L  CS +GLV+ G   F+ MR + 
Sbjct: 537 IISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDH 596

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            I+P +EHY C+V LL R G L++A +FI  +P AP A +W +LL  C IH  V L    
Sbjct: 597 GIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFS 656

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           AE + E+EP +   YVLL+N+YA A   ++V  LR+ +   G++K PG SW+EIKG+++ 
Sbjct: 657 AEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHA 716

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F  G   HP  + I ++L+ L L+  REGY P     L + D+ +K   L  HSE+LA+A
Sbjct: 717 FSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALA 776

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           +G++  P G  IR+ KNLR C DCH     +SK  +REI++RD NRFHHF+DG+CSC  +
Sbjct: 777 YGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDY 836

Query: 830 W 830
           W
Sbjct: 837 W 837


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/687 (37%), Positives = 391/687 (56%), Gaps = 44/687 (6%)

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +M   G+   +Y  S +++   +  +   +  A  +F+ + + +++ WN M  G+  +  
Sbjct: 9   QMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSD 68

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
               L ++  M++LG   +  T   +L  CA   A   G+ +H   LK  +  ++  + +
Sbjct: 69  PVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTS 128

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG-------VFDG--------- 351
           L+ MY + G L+ A +VF++   R VVS+T++I GYA +G       +FD          
Sbjct: 129 LISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSW 188

Query: 352 ---------------AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
                          A+ LF+ M++  + PD   + S++ ACA    +E+G+ VH +I +
Sbjct: 189 NAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDD 248

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           +   S+L + NAL+D+Y KCG +  A  +F  +  KD++SWNT+IG          AL L
Sbjct: 249 HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLL 308

Query: 447 FVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRH--GISADRNVANAIVDMY 503
           F  ML++ E P+ VTM  ILPACA L A+E GR IH YI +   G++   +   +++DMY
Sbjct: 309 FQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMY 368

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +  A+ +FD I  + L SW  MI G+ MHG    A   F+ MR+  IEPD+++F+
Sbjct: 369 AKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFV 428

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L ACSHSG++D G   F  M+ +  I PKLEHY CM+DLL  +G   EA   I  M +
Sbjct: 429 GLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM 488

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            PD  IW SLL  C++H  V+L E  A+++ ++EP N G YVLL+N+YA A +W EV K+
Sbjct: 489 EPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKI 548

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R  ++ +G+KK PGCS IEI   V+ F+ G   HP  ++I  +L+ + + ++  G+ P T
Sbjct: 549 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 608

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              L   +E  KE AL  HSEKLA+AFG+++   G  + + KNLRVC +CHE  K +SK 
Sbjct: 609 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 668

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +REI+ RD  RFHHF+DG CSC  +W
Sbjct: 669 YKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 227/456 (49%), Gaps = 54/456 (11%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+  +L+ CA  K+  +G+++H  + + G  +D  V  S L+ M+V  G L++ R+VF++
Sbjct: 90  TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTS-LISMYVQNGRLEDARKVFDQ 148

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
             +  V  +  L+  Y+  G                                       +
Sbjct: 149 SSHRDVVSYTALITGYASKG--------------------------------------YI 170

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
             A K+FDE+  +DVVSWN MISGY   G  ++ LE+FKEM+      D +TMV+V+S C
Sbjct: 171 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 230

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A   ++  GR VH++     F   +   N L+D+Y KCG+++ A  +FE +  + V+SW 
Sbjct: 231 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWN 290

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE- 396
           ++I GY    ++  A+ LF+ M+R G  P+   + SIL ACA  G +EIG+ +H YI + 
Sbjct: 291 TLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR 350

Query: 397 -NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALD 445
              + ++     +L+DMYAKCG +  A+ VF+ +  + + SWN MI           A D
Sbjct: 351 LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFD 410

Query: 446 LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMY 503
           +F  M +N  EPD +T   +L AC+    L+ GR I   +   + I+        ++D+ 
Sbjct: 411 IFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLL 470

Query: 504 VKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
              G+   A  + + +  + D + W  ++    MHG
Sbjct: 471 GHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 506



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 207/430 (48%), Gaps = 49/430 (11%)

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG---AIRVFEKMGERSVVSWTSMIAGY 343
           R +HA  +K          + L++        DG   AI VFE + E +++ W +M  G+
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
           A       A+ L+  M+  G+ P+ Y    +L +CA       G+ +H ++ +      L
Sbjct: 64  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123

Query: 404 YVSNALMDMYAKCGSMADAESVFNQ-------------------------------MPVK 432
           YV  +L+ MY + G + DA  VF+Q                               +P+K
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183

Query: 433 DIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIH 481
           D+VSWN MI           AL+LF  M++ N  PD  TM  ++ ACA  A++E GR++H
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
            +I  HG  ++  + NA++D+Y+KCG +  A  LF+ +  KD+ISW  +I GY       
Sbjct: 244 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 303

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG-WRFFNMMRYECNIEPKLEHYAC 600
           +A+  F +M ++G  P++V+ +S+L AC+H G ++ G W    + +    +     H   
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 363

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF--ELEP 658
           ++D+ ++ G++  A +  + + +    + W +++ G  +H     A  +   +   E+EP
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEP 422

Query: 659 DNTGYYVLLA 668
           D+  +  LL+
Sbjct: 423 DDITFVGLLS 432



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 172/410 (41%), Gaps = 76/410 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + E GN ++A+E+     K+ +  D  T  S++  CA   S+E G++VHS I
Sbjct: 187 SWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWI 246

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   +  ++ + L+ +++ CG+++    +F  +    V  WN L+  Y+    +KE+
Sbjct: 247 DDHGFGSNLKIVNA-LIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG----------------------NSRR---- 216
           L LF++M   G + +  T   +L   A +G                      +S R    
Sbjct: 306 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLI 365

Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   ++ A ++FD + +R + SWN MI G+  +G A    ++F  M       D  
Sbjct: 366 DMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDI 425

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V +LS C++ G L  GR  H F              ++ + Y     L+         
Sbjct: 426 TFVGLLSACSHSGMLDLGR--HIF-------------RSMKEDYKITPKLE--------- 461

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                  +  MI      G+F  A  +   M    +EPD     S+L AC   G +E+G+
Sbjct: 462 ------HYGCMIDLLGHSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELGE 512

Query: 389 D-VHDYIKENDMQSSLYVSNALMDMYAKCG---SMADAESVFNQMPVKDI 434
               + IK        YV   L ++YA  G    +A   ++ N   +K +
Sbjct: 513 SYAQNLIKIEPKNPGSYV--LLSNIYATAGRWNEVAKIRALLNDKGMKKV 560


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 282/872 (32%), Positives = 438/872 (50%), Gaps = 124/872 (14%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICES 125
           +N+ I  +C  G LE A  +L+ +  S  + +T   +L   A L  + D ++V       
Sbjct: 67  WNSMISAYCNSGMLEDA-RILFDA-ISGGNVRTATILLSGYARLGRVLDARRVFD----- 119

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
           G+   + V  + +V  +V  GD+   RR+F+ + +  V  WN ++  Y  +    ++  L
Sbjct: 120 GMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNL 179

Query: 186 FKKMQSL-------------------------------GIAADSYTFSCVLKCLA----- 209
           FK+M                                  G + D   F+ VL  +      
Sbjct: 180 FKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDL 239

Query: 210 -------------------VVGNS---RRVKDAH------KLFDELSDRDVVSWNCMISG 241
                              V+G S      +DA       K FD + +R+  +W+ MI+ 
Sbjct: 240 GVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAA 299

Query: 242 YIANGVAEKGLEVF-KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
               G  +  + V+ ++ +       + +   +L+G A CG +   R +     +     
Sbjct: 300 LSHGGRIDAAIAVYGRDPVK-----SIPSQTALLTGLARCGRITEARIL----FEQIPDP 350

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            +   N ++  Y + G +D A  +F++M  R+ +SW  MIAGYA+ G  + A+ L + + 
Sbjct: 351 IVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALH 410

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           R G+ P + ++TS   AC+  G LE G+ VH    +   Q + YV NAL+ MY KC +M 
Sbjct: 411 RNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNME 470

Query: 421 DAESVFNQMPVKDIVSWNTMIGAL------------------------------------ 444
               VFN+M VKD VSWN+ I AL                                    
Sbjct: 471 YVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAER 530

Query: 445 -----DLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
                + F  ML   E P+   +  +L  C  L + + G++IH   ++HG+ ++  VANA
Sbjct: 531 GDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANA 590

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           ++ MY KCG    +  +FD +  +D+ +W   I G   HG G +AI  +  M   G+ P+
Sbjct: 591 LMSMYFKCGC-ADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPN 649

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
           EV+F+ +L ACSH+GLVDEGW+FF  M  +  + P LEHYACMVDLL RTG++  A +FI
Sbjct: 650 EVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFI 709

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
             MP+ PD  IW +LL  C+IH   ++  + AE +F  EP N G YV+L+N+Y+    W 
Sbjct: 710 YDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWV 769

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           EV +LR+ + +RG+ K PGCSW++I+ KV+ FV G   H   ++I+  L+ L   ++  G
Sbjct: 770 EVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTG 829

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
           Y P T + L + DE +KE +L  HSEKLA+A+G+L  P G  I++ KNLR+CGDCH   K
Sbjct: 830 YVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIK 889

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           F+S   +R+I +RD NRFHHF++G CSC  FW
Sbjct: 890 FVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 248/536 (46%), Gaps = 40/536 (7%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICES 125
           ++A I     +G L +A EV  +      D   + S++    +   LED + +   I   
Sbjct: 36  HSARIRELARLGRLREAREVFDAMPHR--DIIAWNSMISAYCNSGMLEDARILFDAISGG 93

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
            +        + L+  +   G + + RRVF+ +       WN ++  Y + G+   +  L
Sbjct: 94  NVRT-----ATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRL 148

Query: 186 FKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
           F  M S  +   S+       C     +SR++ DA  LF ++  R++V+W  MISGY+  
Sbjct: 149 FDAMPSRDVT--SWNSMVTGYC-----HSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRI 201

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
               KG ++F+ M + G + D +   +VLS       L     +    LK  F  ++   
Sbjct: 202 EQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIG 261

Query: 306 NTLLDMYSK-CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            ++L++Y++    LD AI+ F+ M ER+  +W++MIA  +  G  D AI ++      G 
Sbjct: 262 TSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY------GR 315

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS-NALMDMYAKCGSMADAE 423
           +P V +I S        GL   G+     I    +   + VS NA++  Y + G + +A+
Sbjct: 316 DP-VKSIPS--QTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAK 372

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLA 472
            +F++MP ++ +SW  MI           ALDL  A+ +N   P   ++     AC+ + 
Sbjct: 373 ELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIG 432

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           ALE GR++H   ++ G   +  V NA++ MY KC  +   R +F+ +  KD +SW   IA
Sbjct: 433 ALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIA 492

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
               +    DA   F++M    +  D VS+ +++ A + +   DE   FF  M +E
Sbjct: 493 ALVQNNMLEDARHIFDNM----LSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHE 544



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 10/145 (6%)

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D++  +A +    + G L  AR +FD +P +D+I+W  MI+ Y   G   DA   F+ + 
Sbjct: 32  DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS 91

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
              +    +    +L   +  G V +  R F+ M      E     +  MV    + G++
Sbjct: 92  GGNVRTATI----LLSGYARLGRVLDARRVFDGMP-----ERNTVAWNAMVSCYVQNGDI 142

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCG 636
           + A R  + MP + D T W S++ G
Sbjct: 143 TMARRLFDAMP-SRDVTSWNSMVTG 166


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/776 (33%), Positives = 412/776 (53%), Gaps = 46/776 (5%)

Query: 99   YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
            + S+L  C  ++SLE G+++H ++ + G   D  V  + LV ++   G+L     +F+ +
Sbjct: 251  FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA-LVSLYFHLGNLISAEHIFSNM 309

Query: 159  DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKC---------- 207
                   +N L++  S+ G  ++++ LFK+M   G+  DS T  S V+ C          
Sbjct: 310  SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 369

Query: 208  --------LAVVGNSR-------------RVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                    L    N++              ++ A   F E    +VV WN M+  Y    
Sbjct: 370  QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 429

Query: 247  VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
                   +F++M       +  T  ++L  C   G L  G  +H+  +K  F       +
Sbjct: 430  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 489

Query: 307  TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
             L+DMY+K G LD A  +  +   + VVSWT+MIAGY +    D A+  FR M+  GI  
Sbjct: 490  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 549

Query: 367  DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
            D   +T+ + ACA    L+ G+ +H     +   S L   NAL+ +Y++CG + ++   F
Sbjct: 550  DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 609

Query: 427  NQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALE 475
             Q    D ++WN ++           AL +FV M  +  + +  T    + A +  A ++
Sbjct: 610  EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 669

Query: 476  RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
            +G+++H  I + G  ++  V NA++ MY KCG +  A   F  +  K+ +SW  +I  Y 
Sbjct: 670  QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 729

Query: 536  MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
             HGFG +A+ +F+ M  + + P+ V+ + VL ACSH GLVD+G  +F  M  E  + PK 
Sbjct: 730  KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 789

Query: 596  EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
            EHY C+VD+L+R G LS A  FI+ MP+ PDA +W +LL  C +H  +++ E  A H+ E
Sbjct: 790  EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 849

Query: 656  LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
            LEP+++  YVLL+N+YA ++KW+     R+K+  +G+KK PG SWIE+K  ++ F  G  
Sbjct: 850  LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 909

Query: 716  SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME-KEVALCGHSEKLAMAFGILN 774
            +HP A +I    + L       GY     ++L+N  + E K+  +  HSEKLA++FG+L+
Sbjct: 910  NHPLADEIHEYFQDLTKRASEIGYVQDC-FSLLNELQHEQKDPIIFIHSEKLAISFGLLS 968

Query: 775  LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            LPA   I V KNLRVC DCH   KF+SK + REI++RD+ RFHHF+ G CSC+ +W
Sbjct: 969  LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 169/570 (29%), Positives = 261/570 (45%), Gaps = 47/570 (8%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
           SL++G+K+HS I + G+   +G L  KL   ++  GDL    +VF+++    +F WN ++
Sbjct: 60  SLDEGRKLHSQILKLGL-DSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 118

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL---------------------- 208
            E +      E   LF +M S  +  +  TFS VL+                        
Sbjct: 119 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 178

Query: 209 ---AVVGN------SRR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
               VV N      SR   V  A ++FD L  +D  SW  MISG   N    + + +F +
Sbjct: 179 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 238

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           M  LG         +VLS C    +L  G  +H   LK  FS +    N L+ +Y   G+
Sbjct: 239 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 298

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           L  A  +F  M +R  V++ ++I G ++ G  + A+ LF+ M  +G+EPD   + S++ A
Sbjct: 299 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 358

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           C+ DG L  G+ +H Y  +    S+  +  AL+++YAKC  +  A   F +  V+++V W
Sbjct: 359 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 418

Query: 438 NTMIGALDLFVAMLQNFE-----------PDGVTMACILPACASLAALERGREIHGYILR 486
           N M+ A  L   +  +F            P+  T   IL  C  L  LE G +IH  I++
Sbjct: 419 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 478

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
                +  V + ++DMY K G L  A  +      KD++SWT MIAGY  + F   A+ T
Sbjct: 479 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 538

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
           F  M   GI  DEV   + + AC+    + EG +  +           L     +V L S
Sbjct: 539 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYS 597

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           R G + E+Y   E    A D   W +L+ G
Sbjct: 598 RCGKIEESYLAFEQTE-AGDNIAWNALVSG 626



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 271/577 (46%), Gaps = 47/577 (8%)

Query: 89  SEKSKIDTKTYCSILQLC-ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           SE    +  T+  +L+ C     + +  +++H+ I   G+  D  V+ + L+ ++   G 
Sbjct: 139 SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR-DSTVVCNPLIDLYSRNGF 197

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK- 206
           +   RRVF+ +       W  ++   SK     E++ LF  M  LGI    Y FS VL  
Sbjct: 198 VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 257

Query: 207 ----------------------------CLAVVG---NSRRVKDAHKLFDELSDRDVVSW 235
                                       C A+V    +   +  A  +F  +S RD V++
Sbjct: 258 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 317

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N +I+G    G  EK +E+FK M   G   D  T+ +++  C+  G L  G+ +HA+  K
Sbjct: 318 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 377

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
             F+        LL++Y+KC D++ A+  F +    +VV W  M+  Y        + R+
Sbjct: 378 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 437

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           FR M  E I P+ Y   SIL  C   G LE+G+ +H  I + + Q + YV + L+DMYAK
Sbjct: 438 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 497

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACI 464
            G +  A  +  +   KD+VSW TMI           AL  F  ML +    D V +   
Sbjct: 498 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 557

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           + ACA L AL+ G++IH      G S+D    NA+V +Y +CG +  +   F+   A D 
Sbjct: 558 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN 617

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           I+W  +++G+   G   +A+  F  M + GI+ +  +F S + A S +  + +G +   +
Sbjct: 618 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAV 677

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEM 620
           +  +   + + E    ++ + ++ G++S+A + F+E+
Sbjct: 678 IT-KTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 713



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 206/464 (44%), Gaps = 47/464 (10%)

Query: 260 NLGFNVDLATMVTVLSGCANC-GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
           N G   +  T+  +L GC    G+L  GR +H+  LK         +  L D Y   GDL
Sbjct: 37  NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 96

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
            GA +VF++M ER++ +W  MI   A   +      LF  MV E + P+    + +L AC
Sbjct: 97  YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 156

Query: 379 ACDGL-LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
               +  ++ + +H  I    ++ S  V N L+D+Y++ G +  A  VF+ + +KD  SW
Sbjct: 157 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 216

Query: 438 NTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR 486
             MI           A+ LF  M +    P     + +L AC  + +LE G ++HG +L+
Sbjct: 217 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 276

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
            G S+D  V NA+V +Y   G L+ A  +F  +  +D +++  +I G    G+G  A+  
Sbjct: 277 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 336

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR-------------------FFNMMRY 587
           F  M   G+EPD  +  S++ ACS  G +  G +                     N+   
Sbjct: 337 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 396

Query: 588 ECNIEPKLEHY--------------ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
             +IE  L+++                   LL    N    +R +++  + P+   + S+
Sbjct: 397 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 456

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV-LLANVYAEAEK 676
           L  C    +++L E++   + +       Y   +L ++YA+  K
Sbjct: 457 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 500


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 247/622 (39%), Positives = 368/622 (59%), Gaps = 12/622 (1%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A KLFDE    DV  WN +I  Y  N +    +E+++ M   G + D  T   VL  C  
Sbjct: 107 ARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTE 166

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
                    +H   +K  F  ++   N L+ +Y+KCG +  A  VF+ +  R++VSWTS+
Sbjct: 167 LLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSI 226

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I+GYA+ G    A+R+F  M   G++PD  A+ SIL A      LE G+ +H ++ +  +
Sbjct: 227 ISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGL 286

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
           +    +  +L   YAKCG +  A+S F+QM   +++ WN MI           A++LF  
Sbjct: 287 EDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHY 346

Query: 450 ML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M+ +N +PD VT+   + A A + +LE  + +  Y+ +    +D  V  +++DMY KCG 
Sbjct: 347 MISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGS 406

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +  AR +FD    KD++ W+ MI GYG+HG G +AI  ++ M+QAG+ P++V+FI +L A
Sbjct: 407 VEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTA 466

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           C+HSGLV EGW  F+ M+ +  I P+ EHY+C+VDLL R G L EA  FI  +P+ P  +
Sbjct: 467 CNHSGLVKEGWELFHCMK-DFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVS 525

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           +WG+LL  C+I+  V L E  A  +F L+P NTG+YV L+N+YA +  W+ V  +R  + 
Sbjct: 526 VWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMR 585

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
            +GL K+ G S IEI GK+  F  G  SHP AK+I   L+RL   +K  G+ P T   L 
Sbjct: 586 EKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLH 645

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + +  EKE  L  HSE++A+A+G+++   G T+R+TKNLR C +CH   K +SK   REI
Sbjct: 646 DLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREI 705

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           ++RD+NRFHHFKDG CSC  +W
Sbjct: 706 IVRDANRFHHFKDGLCSCGDYW 727



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 33/226 (14%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D     SIL+   D+  LE G+ +H  + + G+  D+  L   L   +  CG +   +
Sbjct: 252 KPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLE-DEPALLISLTAFYAKCGLVTVAK 310

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
             F+++    V +WN ++  Y+K G+ +E++ LF  M S  I  DS T    +   A VG
Sbjct: 311 SFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVG 370

Query: 213 NSR--------------------------------RVKDAHKLFDELSDRDVVSWNCMIS 240
           +                                   V+ A ++FD  SD+DVV W+ MI 
Sbjct: 371 SLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIM 430

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           GY  +G   + + ++  M   G   +  T + +L+ C + G +  G
Sbjct: 431 GYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEG 476


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 226/570 (39%), Positives = 353/570 (61%), Gaps = 12/570 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++++ CA    L   RA+H+   ++  + +    N+L+ MY KCG +  A  VF+ +  R
Sbjct: 67  SIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTR 126

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            VVSWT +I GYA+  +   A+ L   M+R    P  +  TS L A    G   IG+ +H
Sbjct: 127 DVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMH 186

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------- 443
               + ++   +YV +AL+DMYA+C  M  A  VF+ +  K+ VSWN +I          
Sbjct: 187 ALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGE 246

Query: 444 --LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             L  F  M +N F     T + +  A A + ALE+GR +H ++++ G      VAN I+
Sbjct: 247 TTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTIL 306

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
            MY K G +V AR +FD +  +DL++W  M+  +  +G G +A+A F ++R+ GI+ +++
Sbjct: 307 GMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQI 366

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+SVL ACSH GLV EG ++F+MM+ + N+EP+++HY   VDLL R G L EA  F+  
Sbjct: 367 TFLSVLTACSHGGLVKEGKQYFDMMK-DYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFK 425

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ P A +WG+LL  CR+H   K+ +  A+HVFEL+P++TG  VLL N+YA   +W++ 
Sbjct: 426 MPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDA 485

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            ++R+ +   G+KK P CSW+EI+  V++FVA  S+HP +++I  + + +   +K+ GY 
Sbjct: 486 ARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYV 545

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T Y L++  E E+E  L  HSEK+A+AF ++N+PAG TIR+ KN+R+CGDCH   +++
Sbjct: 546 PNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYV 605

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           S+  +REIV+RD+NRFHHF +G CSC  +W
Sbjct: 606 SEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 190/383 (49%), Gaps = 15/383 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V DA  +FD +  RDVVSW  +I+GY  N +  + L +  +ML   F     T  + L  
Sbjct: 113 VSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKA 172

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
              CG    G  +HA A+K    +++   + LLDMY++C  +D AIRVF+ +  ++ VSW
Sbjct: 173 AGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSW 232

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++IAG+AR+G  +  +  F  M R G     +  +S+  A A  G LE G+ VH ++ +
Sbjct: 233 NALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIK 292

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLF------VAM 450
           +  + + +V+N ++ MYAK GSM DA  VF+++  +D+V+WNTM+ A   +      VA 
Sbjct: 293 SGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAH 352

Query: 451 LQNFEPDG-----VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
            +     G     +T   +L AC+    ++ G++    +  + +  + +   + VD+  +
Sbjct: 353 FEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGR 412

Query: 506 CGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
            G+L  A      +P +   + W  ++    MH      I  +       ++P++     
Sbjct: 413 AGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNA--KIGQYAADHVFELDPEDTGPPV 470

Query: 565 VLYAC-SHSGLVDEGWRFFNMMR 586
           +LY   + +G  D+  R   MM+
Sbjct: 471 LLYNIYASTGQWDDAARVRKMMK 493



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 191/396 (48%), Gaps = 35/396 (8%)

Query: 81  KAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF 140
           + +++L + E +    + Y SI+  CA  K+L   + +HS +  S +   DG L + L+ 
Sbjct: 48  RELDLLLTGELAPT-PRVYHSIITACAQSKNLAGARAIHSHLSRSRLA-GDGFLLNSLIH 105

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+  CG + + R VF+ I    V  W  L+  Y++     E+L L   M         +T
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFT 165

Query: 201 FSCVLK---------------CLAV---------VGNS--------RRVKDAHKLFDELS 228
           F+  LK                LAV         VG++        +++  A ++FD L 
Sbjct: 166 FTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD 225

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            ++ VSWN +I+G+   G  E  L  F EM   GF     T  +V S  A  GAL  GR 
Sbjct: 226 SKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRW 285

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VHA  +K+         NT+L MY+K G +  A +VF+++ +R +V+W +M+  +A+ G+
Sbjct: 286 VHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGL 345

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+  F  + + GI+ +     S+L AC+  GL++ GK   D +K+ +++  +    +
Sbjct: 346 GKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVS 405

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            +D+  + G + +A     +MP++   + W  ++GA
Sbjct: 406 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 441



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 442 GALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           G  +L + +     P       I+ ACA    L   R IH ++ R  ++ D  + N+++ 
Sbjct: 46  GLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIH 105

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KCG +  AR +FD IP +D++SWT +I GY  +    +A+    DM +A   P   +
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFT 165

Query: 562 FISVLY---ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
           F S L    AC   G+ ++     + +  + N++  +   + ++D+ +R   +  A R  
Sbjct: 166 FTSFLKAAGACGGRGIGEQ----MHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVF 221

Query: 619 EMMPVAPDATIWGSLLCG 636
           + +    + + W +L+ G
Sbjct: 222 DWLDSKNEVS-WNALIAG 238


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 268/754 (35%), Positives = 414/754 (54%), Gaps = 61/754 (8%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           KT+  +L      + L  GK +H++  +S IV     L +  V ++  CG L   R  F 
Sbjct: 9   KTFRDLLLKSVAERDLFTGKSLHALYVKS-IVASSTYLSNHFVNLYSKCGRLSYARAAFY 67

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
             +   VF +N+++  Y+K                     DS                 +
Sbjct: 68  STEEPNVFSYNVIVKAYAK---------------------DS-----------------K 89

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           +  A +LFDE+   D VS+N +ISGY         + +FK M  LGF VD  T+  +++ 
Sbjct: 90  IHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA 149

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE-RSVVS 335
           C  C  +   + +H F++   F    S NN  +  YSK G L  A+ VF  M E R  VS
Sbjct: 150 C--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W SMI  Y +      A+ L++ M+ +G + D++ + S+L+A      L  G+  H  + 
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267

Query: 396 ENDMQSSLYVSNALMDMYAKCGS---MADAESVFNQMPVKDIVSWNTMIG---------- 442
           +     + +V + L+D Y+KCG    M D+E VF ++   D+V WNTMI           
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327

Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR-NVANAI 499
            A+  F  M +    PD  +  C+  AC++L++  + ++IHG  ++  I ++R +V NA+
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + +Y K G L  AR +FD +P  + +S+  MI GY  HG G +A+  +  M  +GI P++
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK 447

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           ++F++VL AC+H G VDEG  +FN M+    IEP+ EHY+CM+DLL R G L EA RFI+
Sbjct: 448 ITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFID 507

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP  P +  W +LL  CR H  + LAE+ A  +  ++P     YV+LAN+YA+A KWEE
Sbjct: 508 AMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEE 567

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           +  +R+ +  + ++K PGCSWIE+K K ++FVA   SHP  +++   L+ +  +MK+ GY
Sbjct: 568 MASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGY 627

Query: 740 FPKTRYALIN---ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
               ++A++    A E ++E+ L  HSEKLA+AFG+++   G+ + V KNLR+CGDCH  
Sbjct: 628 VMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNA 687

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KFMS  A REI++RD+ RFH FKDG+CSC  +W
Sbjct: 688 IKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 42/290 (14%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD---LK 149
           KID  T  S+L     L  L  G++ H  + ++G   +  V GS L+  +  CG    + 
Sbjct: 237 KIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV-GSGLIDFYSKCGGCDGMY 295

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNF-KESLYLFKKMQSLGIAADSYTFSCVL--- 205
           +  +VF +I +  + +WN ++  YS      +E++  F++MQ +G   D  +F CV    
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355

Query: 206 -------KCLAVVG-----------------------NSRRVKDAHKLFDELSDRDVVSW 235
                  +C  + G                        S  ++DA  +FD + + + VS+
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           NCMI GY  +G   + L +++ ML+ G   +  T V VLS CA+CG +  G+  +   +K
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE-YFNTMK 474

Query: 296 ACF--SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAG 342
             F    E    + ++D+  + G L+ A R  + M  +   V+W +++  
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/776 (33%), Positives = 412/776 (53%), Gaps = 46/776 (5%)

Query: 99   YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
            + S+L  C  ++SLE G+++H ++ + G   D  V  + LV ++   G+L     +F+ +
Sbjct: 291  FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA-LVSLYFHLGNLISAEHIFSNM 349

Query: 159  DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKC---------- 207
                   +N L++  S+ G  ++++ LFK+M   G+  DS T  S V+ C          
Sbjct: 350  SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409

Query: 208  --------LAVVGNSR-------------RVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                    L    N++              ++ A   F E    +VV WN M+  Y    
Sbjct: 410  QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469

Query: 247  VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
                   +F++M       +  T  ++L  C   G L  G  +H+  +K  F       +
Sbjct: 470  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529

Query: 307  TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
             L+DMY+K G LD A  +  +   + VVSWT+MIAGY +    D A+  FR M+  GI  
Sbjct: 530  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589

Query: 367  DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
            D   +T+ + ACA    L+ G+ +H     +   S L   NAL+ +Y++CG + ++   F
Sbjct: 590  DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649

Query: 427  NQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALE 475
             Q    D ++WN ++           AL +FV M  +  + +  T    + A +  A ++
Sbjct: 650  EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709

Query: 476  RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
            +G+++H  I + G  ++  V NA++ MY KCG +  A   F  +  K+ +SW  +I  Y 
Sbjct: 710  QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 769

Query: 536  MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
             HGFG +A+ +F+ M  + + P+ V+ + VL ACSH GLVD+G  +F  M  E  + PK 
Sbjct: 770  KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 829

Query: 596  EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
            EHY C+VD+L+R G LS A  FI+ MP+ PDA +W +LL  C +H  +++ E  A H+ E
Sbjct: 830  EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 889

Query: 656  LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
            LEP+++  YVLL+N+YA ++KW+     R+K+  +G+KK PG SWIE+K  ++ F  G  
Sbjct: 890  LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 949

Query: 716  SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME-KEVALCGHSEKLAMAFGILN 774
            +HP A +I    + L       GY     ++L+N  + E K+  +  HSEKLA++FG+L+
Sbjct: 950  NHPLADEIHEYFQDLTKRASEIGYVQDC-FSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1008

Query: 775  LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            LPA   I V KNLRVC DCH   KF+SK + REI++RD+ RFHHF+ G CSC+ +W
Sbjct: 1009 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 169/570 (29%), Positives = 261/570 (45%), Gaps = 47/570 (8%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
           SL++G+K+HS I + G+   +G L  KL   ++  GDL    +VF+++    +F WN ++
Sbjct: 100 SLDEGRKLHSQILKLGL-DSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL---------------------- 208
            E +      E   LF +M S  +  +  TFS VL+                        
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218

Query: 209 ---AVVGN------SRR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
               VV N      SR   V  A ++FD L  +D  SW  MISG   N    + + +F +
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           M  LG         +VLS C    +L  G  +H   LK  FS +    N L+ +Y   G+
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           L  A  +F  M +R  V++ ++I G ++ G  + A+ LF+ M  +G+EPD   + S++ A
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           C+ DG L  G+ +H Y  +    S+  +  AL+++YAKC  +  A   F +  V+++V W
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458

Query: 438 NTMIGALDLFVAMLQNFE-----------PDGVTMACILPACASLAALERGREIHGYILR 486
           N M+ A  L   +  +F            P+  T   IL  C  L  LE G +IH  I++
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
                +  V + ++DMY K G L  A  +      KD++SWT MIAGY  + F   A+ T
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
           F  M   GI  DEV   + + AC+    + EG +  +           L     +V L S
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYS 637

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           R G + E+Y   E    A D   W +L+ G
Sbjct: 638 RCGKIEESYLAFEQTE-AGDNIAWNALVSG 666



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 271/577 (46%), Gaps = 47/577 (8%)

Query: 89  SEKSKIDTKTYCSILQLC-ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           SE    +  T+  +L+ C     + +  +++H+ I   G+  D  V+ + L+ ++   G 
Sbjct: 179 SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR-DSTVVCNPLIDLYSRNGF 237

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK- 206
           +   RRVF+ +       W  ++   SK     E++ LF  M  LGI    Y FS VL  
Sbjct: 238 VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297

Query: 207 ----------------------------CLAVVG---NSRRVKDAHKLFDELSDRDVVSW 235
                                       C A+V    +   +  A  +F  +S RD V++
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N +I+G    G  EK +E+FK M   G   D  T+ +++  C+  G L  G+ +HA+  K
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
             F+        LL++Y+KC D++ A+  F +    +VV W  M+  Y        + R+
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           FR M  E I P+ Y   SIL  C   G LE+G+ +H  I + + Q + YV + L+DMYAK
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 537

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACI 464
            G +  A  +  +   KD+VSW TMI           AL  F  ML +    D V +   
Sbjct: 538 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 597

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           + ACA L AL+ G++IH      G S+D    NA+V +Y +CG +  +   F+   A D 
Sbjct: 598 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN 657

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           I+W  +++G+   G   +A+  F  M + GI+ +  +F S + A S +  + +G +   +
Sbjct: 658 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAV 717

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEM 620
           +  +   + + E    ++ + ++ G++S+A + F+E+
Sbjct: 718 IT-KTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 753



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 206/464 (44%), Gaps = 47/464 (10%)

Query: 260 NLGFNVDLATMVTVLSGCANC-GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
           N G   +  T+  +L GC    G+L  GR +H+  LK         +  L D Y   GDL
Sbjct: 77  NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
            GA +VF++M ER++ +W  MI   A   +      LF  MV E + P+    + +L AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196

Query: 379 ACDGL-LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
               +  ++ + +H  I    ++ S  V N L+D+Y++ G +  A  VF+ + +KD  SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256

Query: 438 NTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR 486
             MI           A+ LF  M +    P     + +L AC  + +LE G ++HG +L+
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
            G S+D  V NA+V +Y   G L+ A  +F  +  +D +++  +I G    G+G  A+  
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR-------------------FFNMMRY 587
           F  M   G+EPD  +  S++ ACS  G +  G +                     N+   
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436

Query: 588 ECNIEPKLEHY--------------ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
             +IE  L+++                   LL    N    +R +++  + P+   + S+
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV-LLANVYAEAEK 676
           L  C    +++L E++   + +       Y   +L ++YA+  K
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 254/716 (35%), Positives = 394/716 (55%), Gaps = 44/716 (6%)

Query: 159  DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
            DN  VF WN  + E    G+   ++  F  M  L I  D+ T   VL  +A   +    K
Sbjct: 865  DNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGK 924

Query: 219  DAH--------------------------------KLFDELSDRDVVSWNCMISGYIANG 246
              H                                ++F+++   D++SWN MIS    + 
Sbjct: 925  QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSS 984

Query: 247  VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC-GALMFGRAVHAFALKACFSKEISFN 305
            + E+ + +F ++L+ G   D  T+ +VL  C++    L   R +H  ALK     +    
Sbjct: 985  LEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVA 1044

Query: 306  NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
             TL+D+YSK G ++ A  +F+   +  +  W +M+ GY        A+ LF  + + G +
Sbjct: 1045 TTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEK 1104

Query: 366  PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
             D   + +   AC C  LL+ GK +H +  +    S L+V++ ++DMY KCG M +A  V
Sbjct: 1105 SDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIV 1164

Query: 426  FNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAAL 474
            FN +   D V+W +MI           AL ++  M Q+   PD  T A ++ A + + AL
Sbjct: 1165 FNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTAL 1224

Query: 475  ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
            E+GR++H  +++    +D  V  ++VDMY KCG +  A  LF  +  +++  W  M+ G 
Sbjct: 1225 EQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGL 1284

Query: 535  GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
              HG   +A+  F  M+  GIEPD VSFI +L ACSH+GL  E + + + M  +  IEP+
Sbjct: 1285 AQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPE 1344

Query: 595  LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
            +EHY+C+VD L R G + EA + IE MP    A+I  +LL  CRI  +V+  ++VA  +F
Sbjct: 1345 IEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLF 1404

Query: 655  ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG 714
             LEP ++  YVLL+N+YA A +W++V   R+ + R+ +KK+PG SWI++K  +++FV   
Sbjct: 1405 ALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDD 1464

Query: 715  SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
             SHP A  I   ++ +   ++ +GY P T + L++ ++ EKE +L  HSEKLA+A+G+++
Sbjct: 1465 RSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLIS 1524

Query: 775  LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             PA  TIRV KNLRVCGDCH   K++SK   REIVLRD+NRFHHF+DG CSC  +W
Sbjct: 1525 TPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 175/596 (29%), Positives = 311/596 (52%), Gaps = 32/596 (5%)

Query: 98   TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
            T   +L+LC +   L   + VH    + G+  D  V G+ LV ++  CG +++ R +F+ 
Sbjct: 729  TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGA-LVNIYSKCGRMRDARLLFDW 787

Query: 158  IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG--NSR 215
            +    V +WN+++  Y + G  KE+  LF +    G+  D ++   +L  ++ V     +
Sbjct: 788  MRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGK 847

Query: 216  RVKD-----AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
             + D     A KL     + DV  WN  +S  +  G     +E F  M  L  + D  T+
Sbjct: 848  WLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTL 907

Query: 271  VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + VL+  A    L  G+ VH  A+K+    ++S  N+L++MYSK G    A  VF  M  
Sbjct: 908  LVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKH 967

Query: 331  RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC--DGLLEIGK 388
              ++SW SMI+  A+  + + ++ LF  ++ EG++PD + + S+L AC+   DG L I +
Sbjct: 968  LDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDG-LNISR 1026

Query: 389  DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM-----IG- 442
             +H +  +    +  +V+  L+D+Y+K G M +AE +F      D+  WN M     IG 
Sbjct: 1027 QIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGN 1086

Query: 443  ----ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                AL+LF  + ++ E  D +T+A    AC  L  L++G++IH + ++ G  +D +V +
Sbjct: 1087 DGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNS 1146

Query: 498  AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
             I+DMY+KCG +V A  +F+ I A D ++WT MI+G   +G    A+  ++ MRQ+ + P
Sbjct: 1147 GILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMP 1206

Query: 558  DEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
            DE +F +++ A S    +++G +   N+++ +C  +P +     +VD+ ++ GN+ +AYR
Sbjct: 1207 DEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYR 1264

Query: 617  FIEMMPVAPDATIWGSLLCGCRIH----HEVKLAEKVAEHVFELEPDNTGYYVLLA 668
              + M V  +  +W ++L G   H      V L + +  H   +EPD   +  +L+
Sbjct: 1265 LFKKMNVR-NIALWNAMLVGLAQHGNAEEAVNLFKSMKSH--GIEPDRVSFIGILS 1317



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 222/473 (46%), Gaps = 46/473 (9%)

Query: 95   DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
            D  T   +L   A    LE GK+VH I  +SG+  D  V  S LV M+   G     R V
Sbjct: 903  DAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANS-LVNMYSKMGCAYFAREV 961

Query: 155  FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------- 207
            FN + +  +  WN ++   +++   +ES+ LF  +   G+  D +T + VL+        
Sbjct: 962  FNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDG 1021

Query: 208  --------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
                                      + V   S ++++A  LF    D D+  WN M+ G
Sbjct: 1022 LNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFG 1081

Query: 242  YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
            YI     +K LE+F  +   G   D  T+ T    C     L  G+ +HA A+KA F  +
Sbjct: 1082 YIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD 1141

Query: 302  ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
            +  N+ +LDMY KCGD+  A  VF  +     V+WTSMI+G    G  D A+R++  M +
Sbjct: 1142 LHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQ 1201

Query: 362  EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
              + PD Y   +++ A +C   LE G+ +H  + + D  S  +V  +L+DMYAKCG++ D
Sbjct: 1202 SRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIED 1261

Query: 422  AESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACAS 470
            A  +F +M V++I  WN M+           A++LF +M  +  EPD V+   IL AC+ 
Sbjct: 1262 AYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSH 1321

Query: 471  LAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
                    E +H     +GI  +    + +VD   + G++  A  + + +P K
Sbjct: 1322 AGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFK 1374



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 157/595 (26%), Positives = 260/595 (43%), Gaps = 99/595 (16%)

Query: 115  GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY- 173
            GK  H+ I  SG    D  L + L+ M+  CG L   R+VF+      +  WN ++  Y 
Sbjct: 640  GKCTHARIVVSGSA-GDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 698

Query: 174  ----SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CL-------------------- 208
                S  GN +E L+LF+ +++   +    T + VLK CL                    
Sbjct: 699  ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 758

Query: 209  -----------AVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                        +     R++DA  LFD + +RDVV WN M+ GY+  G+ ++  ++F E
Sbjct: 759  EWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSE 818

Query: 258  MLNLGFNVDLATMVTVLSGCANCG---ALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
                G   D  ++  +L+G +             V A+A K   S +             
Sbjct: 819  FHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDD------------- 865

Query: 315  CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
                              V  W   ++     G   GAI  F  M    I+ D   +  +
Sbjct: 866  ---------------NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVV 910

Query: 375  LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
            L A A    LE+GK VH    ++ + S + V+N+L++MY+K G    A  VFN M   D+
Sbjct: 911  LAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDL 970

Query: 435  VSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASL-AALERGREIHG 482
            +SWN+MI           +++LF+ +L +  +PD  T+A +L AC+SL   L   R+IH 
Sbjct: 971  ISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHV 1030

Query: 483  YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
            + L+ G  AD  VA  ++D+Y K G +  A  LF      DL  W  M+ GY +   G  
Sbjct: 1031 HALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKK 1090

Query: 543  AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
            A+  F+ + ++G + D+++  +   AC    L+D+G +  +    +   +  L   + ++
Sbjct: 1091 ALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQG-KQIHAHAIKAGFDSDLHVNSGIL 1149

Query: 603  DLLSRTGNLSEA---YRFIEMMPVAPDATIWGSLLCGC----------RIHHEVK 644
            D+  + G++  A   + +I     APD   W S++ GC          RI+H ++
Sbjct: 1150 DMYIKCGDMVNAGIVFNYIS----APDDVAWTSMISGCVDNGNEDQALRIYHRMR 1200



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 16/212 (7%)

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
           L +GK  H  I  +      ++SN L+ MY+KCGS++ A  VF+  P +D+V+WN ++GA
Sbjct: 637 LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 696

Query: 444 ---------------LDLFVAMLQNF-EPDGVTMACILPACASLAALERGREIHGYILRH 487
                          L LF  +  +      +T+A +L  C +   L     +HGY ++ 
Sbjct: 697 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI 756

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           G+  D  V+ A+V++Y KCG +  AR LFD +  +D++ W +M+ GY   G   +A   F
Sbjct: 757 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 816

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
           ++  ++G+ PDE S   +L   S     +  W
Sbjct: 817 SEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW 848



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 5/164 (3%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L+ G+  HA  + +  + +   +N LL MYSKCG L  A +VF+   ER +V+W +++  
Sbjct: 637 LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 696

Query: 343 YA-----REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           YA      +G     + LFR +           +  +L  C   G L   + VH Y  + 
Sbjct: 697 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI 756

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
            ++  ++VS AL+++Y+KCG M DA  +F+ M  +D+V WN M+
Sbjct: 757 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMML 800


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/620 (40%), Positives = 358/620 (57%), Gaps = 48/620 (7%)

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGA 282
           FD++  +DV +WN MIS Y+ NG   + +  F ++L +     D  T   VL  C   G 
Sbjct: 74  FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GT 130

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L+ GR +H +A K  F   +    +L+ MYS+ G    A  +F+ M  R + SW +MI+G
Sbjct: 131 LVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 190

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
             + G    A+ +   M  EGI+ +   + SIL                           
Sbjct: 191 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSIL--------------------------- 223

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ 452
                  +DMYAK G +  A  VF  +PVKD++SWNT+I           A++++  M +
Sbjct: 224 ----PVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEE 279

Query: 453 NFE--PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
             E  P+  T   ILPA A + AL++G +IHG +++  +  D  VA  ++D+Y KCG LV
Sbjct: 280 CKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLV 339

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            A SLF  +P +  ++W  +I+ +G+HG     +  F +M   G++PD V+F+S+L ACS
Sbjct: 340 DAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACS 399

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
           HSG V+EG   F +M+ E  I+P L+HY CMVDLL R G L  AY FI+ MP+ PDA+IW
Sbjct: 400 HSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIW 458

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
           G+LL  CRIH  ++L +  ++ +FE++  N GYYVLL+N+YA   KWE V K+R     R
Sbjct: 459 GALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARER 518

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           GLKK PG S IE+  KV++F  G  SHP  K+I   L+ L  +MK  GY P   + L + 
Sbjct: 519 GLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDV 578

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           +E EKE  L  HSE+LA+AFGI++ P    IR+ KNLRVCGDCH   KF+S+  +REIV+
Sbjct: 579 EEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVV 638

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RDSNRFHHFKDG CSC  +W
Sbjct: 639 RDSNRFHHFKDGICSCGDYW 658



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 214/467 (45%), Gaps = 75/467 (16%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
            K +H+++  +G V     + ++LV ++   GD+   R  F++I    V+ WN ++  Y 
Sbjct: 35  AKCLHALLVVAGKV-QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93

Query: 175 KTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSRRVK--------------- 218
             G+F E++  F ++  +  I  D YTF  VLK    + + R++                
Sbjct: 94  HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVA 153

Query: 219 --------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                          A  LFD++  RD+ SWN MISG I NG A + L+V  EM   G  
Sbjct: 154 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 213

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           ++  T+V++L                                  +DMY+K G LD A +V
Sbjct: 214 MNFVTVVSILP-------------------------------VFVDMYAKLGLLDSAHKV 242

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDGL 383
           FE +  + V+SW ++I GYA+ G+   AI +++ M   + I P+     SIL A A  G 
Sbjct: 243 FEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGA 302

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           L+ G  +H  + + ++   ++V+  L+D+Y KCG + DA S+F Q+P +  V+WN +I  
Sbjct: 303 LQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISC 362

Query: 443 ---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                     L LF  ML +  +PD VT   +L AC+    +E G+     +  +GI   
Sbjct: 363 HGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPS 422

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
                 +VD+  + G L +A      +P + D   W  ++    +HG
Sbjct: 423 LKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHG 469



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 139/543 (25%), Positives = 243/543 (44%), Gaps = 77/543 (14%)

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           F + +HA  + A   + I  +  L+++Y+  GD+  +   F+++ ++ V +W SMI+ Y 
Sbjct: 34  FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93

Query: 345 REGVFDGAIRLF-RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
             G F  AI  F + ++   I PD Y    +L AC   G L  G+ +H +  +   Q ++
Sbjct: 94  HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNV 150

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQ 452
           +V+ +L+ MY++ G    A S+F+ MP +D+ SWN MI           ALD+   M L+
Sbjct: 151 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 210

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
             + + VT+  ILP                                 VDMY K G+L  A
Sbjct: 211 GIKMNFVTVVSILP-------------------------------VFVDMYAKLGLLDSA 239

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-IEPDEVSFISVLYACSH 571
             +F++IP KD+ISW  +I GY  +G   +AI  +  M +   I P++ +++S+L A +H
Sbjct: 240 HKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAH 299

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
            G + +G +    +  + N+   +    C++D+  + G L +A      +P     T W 
Sbjct: 300 VGALQQGMKIHGRV-IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT-WN 357

Query: 632 SLLCGCRIH-HEVKLAEKVAEHVFE-LEPDNTGYYVLLA----NVYAEAEKWEEVKKLRE 685
           +++    IH H  K  +   E + E ++PD+  +  LL+    + + E  KW    +L +
Sbjct: 358 AIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW--CFRLMQ 415

Query: 686 KISRRGLKKNPGCSWIEIKGKVNI------FVAGGSSHPHAKKIESLLKRLRLEMKRE-G 738
           +   +   K+ GC  +++ G+         F+      P A    +LL   R+    E G
Sbjct: 416 EYGIKPSLKHYGCM-VDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELG 474

Query: 739 YFPKTRYALINADEMEKEVAL------CGHSE------KLAMAFGILNLPAGQTIRVTKN 786
            F   R   +++  +   V L       G  E       LA   G+   P   TI V + 
Sbjct: 475 KFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRK 534

Query: 787 LRV 789
           + V
Sbjct: 535 VDV 537



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 211/457 (46%), Gaps = 31/457 (6%)

Query: 7   KITTNFLFFSPPNQSYGK--------------KFASYKPSTLPIIVSSKSHSSCTINPIS 52
           +I  NFLF S     + K               F S +   L   +   S S CT + I 
Sbjct: 19  EIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP 78

Query: 53  ASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADL 109
                        +N+ I  +   G+  +A+   Y      + + D  T+  +L+ C   
Sbjct: 79  QK-------DVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG-- 129

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLL 169
            +L DG+K+H    + G   +  V  S L+ M+   G     R +F+ +    +  WN +
Sbjct: 130 -TLVDGRKIHCWAFKLGFQWNVFVAAS-LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAM 187

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD-AHKLFDELS 228
           +    + GN  ++L +  +M+  GI  +  T   +L     +     + D AHK+F+ + 
Sbjct: 188 ISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIP 247

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGR 287
            +DV+SWN +I+GY  NG+A + +EV+K M      + +  T V++L   A+ GAL  G 
Sbjct: 248 VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGM 307

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            +H   +K     ++     L+D+Y KCG L  A+ +F ++ + S V+W ++I+ +   G
Sbjct: 308 KIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHG 367

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
             +  ++LF  M+ EG++PD     S+L AC+  G +E GK     ++E  ++ SL    
Sbjct: 368 HAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYG 427

Query: 408 ALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            ++D+  + G +  A      MP++ D   W  ++GA
Sbjct: 428 CMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGA 464


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 260/738 (35%), Positives = 401/738 (54%), Gaps = 92/738 (12%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           + LV MFV CG +    R+F++I+   +F  N ++  Y+K       LY           
Sbjct: 167 TALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAK-------LY----------- 208

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                                +  A + F+++++RDVVSWN MI+    +G   + L + 
Sbjct: 209 --------------------GIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLV 248

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
            EM   G  +D  T  + L+ CA   +L +G+ +HA  +++    +    + L+++Y+KC
Sbjct: 249 VEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKC 308

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G    A RVF  + +R+ VSWT +I G  +   F  ++ LF  M  E +  D +A+ +++
Sbjct: 309 GSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLI 368

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
             C     L +G+ +H    ++    ++ VSN+L+ +YAKCG + +AE VF+ M  +DIV
Sbjct: 369 SGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIV 428

Query: 436 SWNTMIGA-----------------------------------------LDLFVAML--Q 452
           SW +MI A                                         L ++ AML  +
Sbjct: 429 SWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQK 488

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
           +  PD VT   +   CA + A + G +I G+ ++ G+  + +VANA + MY KCG +  A
Sbjct: 489 DVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEA 548

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           + LFD++  KD++SW  MI GY  HG G  A  TF+DM   G +PD +S+++VL  CSHS
Sbjct: 549 QKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHS 608

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           GLV EG  +F+MM     I P LEH++CMVDLL R G+L+EA   I+ MP+ P A +WG+
Sbjct: 609 GLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGA 668

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           LL  C+IH   +LAE  A+HVFEL+  ++G Y+LLA +Y++A K ++  ++R+ +  +G+
Sbjct: 669 LLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGI 728

Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 752
           KKNPG SW+E++ KV++F A   SHP    I + +  L  ++   GY        +  + 
Sbjct: 729 KKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGY--------VRTES 780

Query: 753 MEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRD 812
              E+    HSEKLA+AFGI++LPA   I + KNLR+CGDCH + K +S    RE V+RD
Sbjct: 781 PRSEIH---HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRD 837

Query: 813 SNRFHHFKDGRCSCRGFW 830
             RFHHFK G CSC  +W
Sbjct: 838 GVRFHHFKSGSCSCGDYW 855



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 146/563 (25%), Positives = 247/563 (43%), Gaps = 71/563 (12%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR--VKDA 220
           VF+ N L+H Y   G   ++  L +        AD    + +   + + G +++  + DA
Sbjct: 55  VFLQNTLLHAYLSCGALSDARRLLR--------ADIKEPNVITHNIMMNGYAKQGSLSDA 106

Query: 221 HKLFDELSDRDVVSWNCMIS------GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
            +LFD +  RDV SWN ++S      G   +  A    E+  ++L L +  D      V 
Sbjct: 107 EELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVE 166

Query: 275 SGCANCGALMFGRAVHAFALKACFSK----EISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           +   +    MF R  +       FS+     I   N++L  Y+K   +D AI  FE M E
Sbjct: 167 TALVD----MFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAE 222

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R VVSW  MIA  ++ G    A+ L   M R+G+  D    TS L ACA    L  GK +
Sbjct: 223 RDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQL 282

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  +  +  Q   YV++AL+++YAKCGS  +A+ VFN +  ++ VSW  +IG        
Sbjct: 283 HAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECF 342

Query: 443 --ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             +++LF  M       D   +A ++  C +   L  GR++H   L+ G +    V+N++
Sbjct: 343 SKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSL 402

Query: 500 VDMYVKCGVL-------------------------------VLARSLFDMIPAKDLISWT 528
           + +Y KCG L                               + AR  FD +  ++ I+W 
Sbjct: 403 ISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWN 462

Query: 529 IMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
            M+  Y  HG   D +  ++ M  Q  + PD V+++++   C+  G    G +       
Sbjct: 463 AMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT-V 521

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
           +  +   +      + + S+ G +SEA +  +++    D   W +++ G   H   K A 
Sbjct: 522 KAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN-GKDVVSWNAMITGYSQHGMGKQAA 580

Query: 648 KVAEHVFE--LEPDNTGYYVLLA 668
           K  + +     +PD   Y  +L+
Sbjct: 581 KTFDDMLSKGAKPDYISYVAVLS 603



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 209/447 (46%), Gaps = 69/447 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I    + G + +A+ ++    +   ++D+ TY S L  CA L SL  GK++H+ +
Sbjct: 227 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 286

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             S   ID  V  S L+ ++  CG  KE +RVFN + +     W +L+    +   F +S
Sbjct: 287 IRSLPQIDPYV-ASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKS 345

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK--------CLA----------------VVGNSR--- 215
           + LF +M++  +A D +  + ++         CL                 VV NS    
Sbjct: 346 VELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISL 405

Query: 216 -----RVKDAHKLFDELSDRDVVS-------------------------------WNCMI 239
                 +++A  +F  +S+RD+VS                               WN M+
Sbjct: 406 YAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAML 465

Query: 240 SGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
             YI +G  E GL+++  ML+      D  T VT+  GCA+ GA   G  +    +KA  
Sbjct: 466 GAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGL 525

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
              +S  N  + MYSKCG +  A ++F+ +  + VVSW +MI GY++ G+   A + F  
Sbjct: 526 ILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDD 585

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCG 417
           M+ +G +PD  +  ++L  C+  GL++ GK   D + + + +   L   + ++D+  + G
Sbjct: 586 MLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAG 645

Query: 418 SMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +A+ + ++MP+K     W  ++ A
Sbjct: 646 HLTEAKDLIDKMPMKPTAEVWGALLSA 672



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 147/350 (42%), Gaps = 49/350 (14%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE-K 327
            +   L  C + GAL   RA+H   +    +  +   NTLL  Y  CG L  A R+    
Sbjct: 22  ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE------PDVYAITSILHACACD 381
           + E +V++   M+ GYA++G    A  LF  M R  +        D         +C   
Sbjct: 82  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ------------- 428
           G  E+   +     + D      V  AL+DM+ +CG +  A  +F+Q             
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 201

Query: 429 ------------------MPVKDIVSWNTMIGALD----------LFVAM-LQNFEPDGV 459
                             M  +D+VSWN MI AL           L V M  +    D  
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 261

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           T    L ACA L +L  G+++H  ++R     D  VA+A++++Y KCG    A+ +F+ +
Sbjct: 262 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 321

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             ++ +SWT++I G   +     ++  FN MR   +  D+ +  +++  C
Sbjct: 322 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 59/330 (17%)

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G   GA  L   +V  G+   V+   ++LHA    G L    D    ++ +  + ++  
Sbjct: 33  RGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALS---DARRLLRADIKEPNVIT 89

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACIL 465
            N +M+ YAK GS++DAE +F++MP +D+ SWNT+         M     P G  M+C  
Sbjct: 90  HNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTL---------MSDTSRPAGSWMSCGA 140

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI------ 519
             C  LA      ++ G   +     D +V  A+VDM+V+CG +  A  LF  I      
Sbjct: 141 LGCRELAP-----QLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIF 195

Query: 520 -------------------------PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
                                      +D++SW +MIA     G   +A+    +M + G
Sbjct: 196 CRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG 255

Query: 555 IEPDEVSFISVLYACSHSGLVDEGW---RFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
           +  D  ++ S L AC+   L   GW       ++R    I+P +   + +++L ++ G+ 
Sbjct: 256 VRLDSTTYTSSLTACAR--LFSLGWGKQLHAKVIRSLPQIDPYVA--SALIELYAKCGSF 311

Query: 612 SEAYRFIEMM----PVAPDATIWGSLLCGC 637
            EA R    +     V+    I GSL   C
Sbjct: 312 KEAKRVFNSLQDRNSVSWTVLIGGSLQYEC 341



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 119/285 (41%), Gaps = 24/285 (8%)

Query: 456 PDGVT--MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
           P  VT  +A  L +C S  AL   R +HG ++  G+++   + N ++  Y+ CG L  AR
Sbjct: 16  PHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDAR 75

Query: 514 SLFDM-IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE------PDEVSFISVL 566
            L    I   ++I+  IM+ GY   G   DA   F+ M +  +        D        
Sbjct: 76  RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSW 135

Query: 567 YACSHSGLVDEGWRFFNMM-RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
            +C   G  +   +   +  +++   +P +E    +VD+  R G +  A R    +   P
Sbjct: 136 MSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMFVRCGYVDFASRLFSQIE-RP 192

Query: 626 DATIWGSLLCGCR----IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
                 S+L G      I H ++  E +AE       D   + +++A + +++ +  E  
Sbjct: 193 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAER------DVVSWNMMIAAL-SQSGRVREAL 245

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESL 726
            L  ++ R+G++ +       +     +F  G     HAK I SL
Sbjct: 246 GLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 290


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 281/871 (32%), Positives = 423/871 (48%), Gaps = 149/871 (17%)

Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNL 168
           + SL   K +H+ + +     +       L+  ++  GD      VF          WN 
Sbjct: 43  ITSLTSVKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNS 102

Query: 169 LMHEY-SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CLAVV--------------- 211
            + E+ S  G+    L +FK++   G+  DS  +S  LK C  V+               
Sbjct: 103 FVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKR 162

Query: 212 ----------------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                           G    ++ A+++F E+ + + + WN  I   + +   +KG+E+F
Sbjct: 163 GFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELF 222

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
           ++M       + AT+V VL  C   GAL   + +H +  +     ++S  N L+ MYSK 
Sbjct: 223 RKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKN 282

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF------------------- 356
           G L+ A RVF+ M  R+  SW SMI+ YA  G  + A  LF                   
Sbjct: 283 GKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLL 342

Query: 357 ----------------RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
                           + M  EG +P+  ++TS+L A +  G L +GK+ H Y+  N   
Sbjct: 343 SGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFD 402

Query: 401 SSLYVSNALMDMYAKCGSMA-------------------------------DAESVFNQM 429
             +YV  +L+DMY K  S+                                DA  + NQM
Sbjct: 403 CDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQM 462

Query: 430 PVK----DIVSWNTMIG------------------------------------------- 442
             +    D+V+WN MI                                            
Sbjct: 463 EKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNN 522

Query: 443 --ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             +L  F  M Q    P+  ++ C+L ACASL+ L++G+EIH   +R+G   D  VA A+
Sbjct: 523 RDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATAL 582

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           +DMY K   L  A  +F  I  K L SW  MI G+ + G G +AI+ FN+M++ G+ PD 
Sbjct: 583 IDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDA 642

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           ++F ++L AC +SGL+ EGW++F+ M  +  I P+LEHY CMVDLL R G L EA+  I 
Sbjct: 643 ITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIH 702

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP+ PDATIWG+LL  CRIH  +K AE  A+++F+LEP+N+  Y+L+ N+Y+   +WE+
Sbjct: 703 TMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWED 762

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           +  LRE +   G++     SWI+I  +V++F +    HP A KI   L +L  EMK+ GY
Sbjct: 763 MDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGY 822

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P       N DE+EK+  L  H+EKLA+ +G++ + AG+ IRV KN R+C DCH  AK+
Sbjct: 823 VPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKY 882

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +S    RE+ LRD  RFHHF++G+CSC  FW
Sbjct: 883 ISLVKARELFLRDGVRFHHFREGKCSCNDFW 913


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 262/765 (34%), Positives = 426/765 (55%), Gaps = 50/765 (6%)

Query: 115 GKKVHSIICESGIVID-DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG--KVFIWNLLMH 171
           G+ +   +  +G +++ D V+ + L+ ++  C  +   R VF+ +  G   +  W  +  
Sbjct: 66  GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--------------------LAVV 211
             S+ G   E+L LF +    G+  +++T     +                     L   
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFW 185

Query: 212 GNSRRVKDA--------------HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
           G    V  A               ++FD L +R VV W  +I+ Y  +G +++ +E+F +
Sbjct: 186 GTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLD 245

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           ML  GF  D  T+ ++LS C   G+   G+ +H+ AL+     +   +  L+DMY+K  +
Sbjct: 246 MLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHN 305

Query: 318 ---LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR-LFRGMVREGIEPDVYAITS 373
              L  A  VF +M + +V++WT++++GY + G  D  +  LF  M+ EGI P+    +S
Sbjct: 306 GQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSS 365

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD 433
           +L ACA  G  + G+ +H +  ++++     V NAL+ MYA+ GS+ +A   F+Q+  K+
Sbjct: 366 MLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKN 425

Query: 434 IVSWNTMIGALDLFVAMLQNFEPDGV-------TMACILPACASLAALERGREIHGYILR 486
           +VS++  +   D      Q+++ + +       T   ++ A AS+  L +G+ +H   L+
Sbjct: 426 MVSFSGNLDG-DGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLK 484

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
            G  +DR + N++V MY +CG LV A  +FD +   ++ISWT MI+G   HG+   A+  
Sbjct: 485 AGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALEL 544

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
           F+DM  AG++P++V++I+VL ACSH+GLV EG   F MM+    + P++EHYACMVDLL 
Sbjct: 545 FHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLG 604

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVL 666
           R+G + +A  FI  MP   DA +W +LL  C+ H+ + + E  A HV +LEP +   YVL
Sbjct: 605 RSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVL 664

Query: 667 LANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESL 726
           L+N+YAEA  W++V ++R  +  + L K  G SW+ +   ++ F AG +SHP A++I + 
Sbjct: 665 LSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTK 724

Query: 727 LKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN-LPAGQTIRVTK 785
           L+ L  E+K  GY P T   L +  +  KE+ L  HSEK+A+AFG+++   A + IR+ K
Sbjct: 725 LETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFK 784

Query: 786 NLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           NLRVC DCH   K++SK   REI+LRDSNRFH  KDG CSC  +W
Sbjct: 785 NLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 138/544 (25%), Positives = 250/544 (45%), Gaps = 66/544 (12%)

Query: 98  TYCSILQLC--ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVF 155
           T C+  Q C  ++L  L  G  V  ++ + G    D  +G  L+ MF   GDL   RRVF
Sbjct: 154 TLCAATQACFASELFHLAGGA-VLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVF 212

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG--- 212
           + +    V +W LL+  Y+++G   E++ LF  M   G   D YT S +L     +G   
Sbjct: 213 DGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFR 272

Query: 213 --------------------------------NSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                           N + + +A ++F+ +   +V++W  ++S
Sbjct: 273 LGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLS 332

Query: 241 GYIANGVAEKGLEV-FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           GY+  G  +  + + F +MLN G   +  T  ++L  CAN G    GR +H   +K+  +
Sbjct: 333 GYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLA 392

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                 N L+ MY++ G ++ A   F+++ E+++VS++  + G       DG    ++  
Sbjct: 393 DLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDG-------DGRSNTYQDY 445

Query: 360 VREGIEPDVYAIT--SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
             E +E  +   T  S++ A A  G+L  G+ +H    +    S   + N+L+ MY++CG
Sbjct: 446 QIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCG 505

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILP 466
            + DA  VF++M   +++SW +MI           AL+LF  M+    +P+ VT   +L 
Sbjct: 506 YLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLS 565

Query: 467 ACASLAALERGREIHGYILR--HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-D 523
           AC+    ++ G+E H  +++  HG+         +VD+  + G++  A    + +P + D
Sbjct: 566 ACSHAGLVKEGKE-HFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVD 624

Query: 524 LISWTIMIAGYGMH-GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
            + W  ++     H       IA  + ++    +P     +S LYA   +GL D+  R  
Sbjct: 625 ALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYA--EAGLWDQVARIR 682

Query: 583 NMMR 586
           ++MR
Sbjct: 683 SLMR 686



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 206/410 (50%), Gaps = 38/410 (9%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I R+ + G  ++A+E+     ++  + D  T  S+L  C +L S   G+++HS+    G+
Sbjct: 227 ITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGL 286

Query: 128 VIDDGVLGSKLVFMFVTCGD---LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF-KESL 183
              D  +   LV M+    +   L   R VFN++    V  W  L+  Y + G+   + +
Sbjct: 287 E-SDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVM 345

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVG--NSRRVKDAHKLFDELSDRDVVSWNCMISG 241
            LF KM + GI  +  T+S +LK  A +G  +S R    H +   L+D +VV  N ++S 
Sbjct: 346 ILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVG-NALVSM 404

Query: 242 YIANGVAEKGLEVF-----KEMLNLGFNVD---------------------LATMVTVLS 275
           Y  +G  E+    F     K M++   N+D                       T  +++S
Sbjct: 405 YAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLIS 464

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
             A+ G L  G+ +HA +LKA F  + +  N+L+ MYS+CG L  A +VF++M + +V+S
Sbjct: 465 AAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVIS 524

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI- 394
           WTSMI+G A+ G    A+ LF  M+  G++P+     ++L AC+  GL++ GK+    + 
Sbjct: 525 WTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQ 584

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           K + +   +     ++D+  + G + DA    N+MP + D + W T++GA
Sbjct: 585 KHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGA 634



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/433 (20%), Positives = 193/433 (44%), Gaps = 51/433 (11%)

Query: 40  SKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDT 96
           +KSH+  +++      ++        + A +  + + G+ +  + +L+    +E  + + 
Sbjct: 301 AKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNH 360

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
            TY S+L+ CA+L   + G+++H+   +S +  D  V+G+ LV M+   G ++E R  F+
Sbjct: 361 ITYSSMLKACANLGDQDSGRQIHTHCVKSNLA-DLNVVGNALVSMYAESGSIEEARHAFD 419

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG---N 213
           ++     +  N++    +  G+ + + Y   +++ + +   ++TF  ++   A VG    
Sbjct: 420 QL-----YEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTK 474

Query: 214 SRRVK-----------------------------DAHKLFDELSDRDVVSWNCMISGYIA 244
            +R+                              DA ++FDE++D +V+SW  MISG   
Sbjct: 475 GQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAK 534

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK-ACFSKEIS 303
           +G A + LE+F +M+  G   +  T + VLS C++ G +  G+       K       + 
Sbjct: 535 HGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRME 594

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFD-GAIRLFRGMVR 361
               ++D+  + G ++ A+    +M  +   + W +++         D G I     +  
Sbjct: 595 HYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQL 654

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ-----SSLYVSNALMDMYAKC 416
           E  +P  Y + S L+A A  GL +    +   +++ ++      S ++V N + +  A  
Sbjct: 655 EPQDPAPYVLLSNLYAEA--GLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGD 712

Query: 417 GSMADAESVFNQM 429
            S   AE ++ ++
Sbjct: 713 TSHPQAEEIYTKL 725


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 242/652 (37%), Positives = 382/652 (58%), Gaps = 44/652 (6%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +F+ + + +++ WN M  G+  N  +   L+++  M++LG   +  +   +L  CA   A
Sbjct: 21  IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L+ G+ +H   LK  +  ++  N +L+ MY++ G L+ A +VF++   R VVS+T++I G
Sbjct: 81  LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140

Query: 343 YAREGV-------------------------------FDGAIRLFRGMVREGIEPDVYAI 371
           YA  G                                F  A+ L++ M++  ++PD   +
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            +++ ACA  G +E+G+ +H +I+++   S++ + N L+D+Y+KCG +  A  +F  +  
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK 260

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREI 480
           KD++SWNT+IG          AL LF  ML++ E P+ VTM  +LPACA L A++ GR I
Sbjct: 261 KDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 320

Query: 481 HGYILRH--GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           H YI +   G++   ++  +++DMY KCG +  A+ +FD +  + L SW  MI G+ MHG
Sbjct: 321 HVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHG 380

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
               A   F+ MR+ GI+PD+++F+ +L ACSHSG++D G   F  M  +  I PKLEHY
Sbjct: 381 KANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHY 440

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
            CM+DLL   G   EA   I  MP+ PD  IW SLL  C++H+ V+L E  A+++ ++EP
Sbjct: 441 GCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEP 500

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
           +N G YVLL+N+YA A +W++V K+R  ++ +G+KK PGCS IEI   V+ F+ G   HP
Sbjct: 501 ENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHP 560

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
             ++I  +L+ + + M+  G+ P T   L   +E  KE AL  HSEKLA+AFG+++   G
Sbjct: 561 RNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPG 620

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             + + KNLRVC +CHE  K +SK  +REI+ RD  R H  KDG  SC  +W
Sbjct: 621 TKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 235/460 (51%), Gaps = 58/460 (12%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ ++  +L+ CA  K+L +G+++H  + + G  +D  V  + L+ M+   G L++  +V
Sbjct: 64  NSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYV-NTSLISMYAQNGRLEDAHKV 122

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F++  +  V  +  L+  Y+  G                                     
Sbjct: 123 FDRSSHRHVVSYTALITGYASRG------------------------------------- 145

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             + +A KLFDE+S +DVVSWN MISGY+     ++ LE++K+M+      D +TMVTV+
Sbjct: 146 -YINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVV 204

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S CA  G++  GR +H++     F   I   N L+D+YSKCG+++ A  +F+ + ++ V+
Sbjct: 205 SACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVI 264

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW ++I G+    ++  A+ LF+ M+R G  P+   + S+L ACA  G ++IG+ +H YI
Sbjct: 265 SWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYI 324

Query: 395 KEN----DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--------- 441
            +        SSL  S  L+DMYAKCG +  A+ VF+ M  + + SWN MI         
Sbjct: 325 NKRLKGVTNASSLLTS--LIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKA 382

Query: 442 -GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANA 498
             A DLF  M +N  +PD +T   +L AC+    L+ GR I   + + + I+        
Sbjct: 383 NAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGC 442

Query: 499 IVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           ++D+   CG+   A+ +   +P + D + W  ++    MH
Sbjct: 443 MIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMH 482



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 197/396 (49%), Gaps = 46/396 (11%)

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           L  AI +FE + E +++ W +M  G+A       A++L+  M+  G+ P+ Y+   +L +
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV------------ 425
           CA    L  G+ +H ++ +      +YV+ +L+ MYA+ G + DA  V            
Sbjct: 75  CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134

Query: 426 -------------------FNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFE 455
                              F+++ VKD+VSWN MI           AL+L+  M++ N +
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           PD  TM  ++ ACA   ++E GR++H +I  HG  ++  + N ++D+Y KCG +  A  L
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           F  +  KD+ISW  +I G+       +A+  F +M ++G  P++V+ +SVL AC+H G +
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314

Query: 576 DEG-WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           D G W    + +    +         ++D+ ++ G++  A +  + M +    + W +++
Sbjct: 315 DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM-LTRSLSSWNAMI 373

Query: 635 CGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
            G  +H +   A  +   + +  ++PD+  +  LL+
Sbjct: 374 FGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLS 409



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 40/354 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + E  N ++A+E+     K+ +  D  T  +++  CA   S+E G+++HS I
Sbjct: 164 SWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWI 223

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   +  ++ + L+ ++  CG+++    +F  +    V  WN L+  ++    +KE+
Sbjct: 224 EDHGFGSNIKIV-NVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEA 282

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG------------NSR--------------- 215
           L LF++M   G + +  T   VL   A +G            N R               
Sbjct: 283 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLI 342

Query: 216 -------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   ++ A ++FD +  R + SWN MI G+  +G A    ++F +M   G + D  
Sbjct: 343 DMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDI 402

Query: 269 TMVTVLSGCANCGALMFGRAV-HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T V +LS C++ G L  GR +  + +     + ++     ++D+   CG    A  +   
Sbjct: 403 TFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRT 462

Query: 328 MG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACA 379
           M  E   V W S++         +      + +++ E   P  Y + S ++A A
Sbjct: 463 MPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATA 516


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/763 (32%), Positives = 421/763 (55%), Gaps = 51/763 (6%)

Query: 115  GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
            G+++   + +SG+     V  S L+ M  + G++     +F+++       WN +   Y+
Sbjct: 269  GRQIIGQVVKSGLESKLAVENS-LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 327

Query: 175  KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------------------- 215
            + G+ +ES  +F  M+      +S T S +L  L  V + +                   
Sbjct: 328  QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 387

Query: 216  -------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                         R  +A+ +F ++  +D++SWN +++ ++ +G +   L +   M++ G
Sbjct: 388  VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 447

Query: 263  FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
             +V+  T  + L+ C        GR +H   + +         N L+ MY K G++  + 
Sbjct: 448  KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 507

Query: 323  RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
            RV  +M  R VV+W ++I GYA +   D A+  F+ M  EG+  +   + S+L AC   G
Sbjct: 508  RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 567

Query: 383  -LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             LLE GK +H YI     +S  +V N+L+ MYAKCG ++ ++ +FN +  ++I++WN M+
Sbjct: 568  DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAML 627

Query: 442  GA---------LDLFVAMLQNF--EPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
             A         +   V+ +++F    D  + +  L A A LA LE G+++HG  ++ G  
Sbjct: 628  AANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 687

Query: 491  ADRNVANAIVDMYVKCGVLVLARSLFDMIPA---KDLISWTIMIAGYGMHGFGCDAIATF 547
             D  + NA  DMY KCG +     +  M+P    + L SW I+I+  G HG+  +  ATF
Sbjct: 688  HDSFIFNAAADMYSKCGEI---GEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 744

Query: 548  NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
            ++M + GI+P  V+F+S+L ACSH GLVD+G  +++M+  +  +EP +EH  C++DLL R
Sbjct: 745  HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 804

Query: 608  TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            +G L+EA  FI  MP+ P+  +W SLL  C+IH  +    K AE++ +LEP++   YVL 
Sbjct: 805  SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 864

Query: 668  ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLL 727
            +N++A   +WE+V+ +R+++  + +KK   CSW+++K KV+ F  G  +HP   +I + L
Sbjct: 865  SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 924

Query: 728  KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNL 787
            + ++  +K  GY   T  AL + DE +KE  L  HSE+LA+A+ +++ P G T+R+ KNL
Sbjct: 925  EDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNL 984

Query: 788  RVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            R+C DCH + KF+S+   R IVLRD  RFHHF+ G CSC+ +W
Sbjct: 985  RICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 155/568 (27%), Positives = 278/568 (48%), Gaps = 37/568 (6%)

Query: 100 CSILQLCADLKSL-EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
            S++  C    S+  +G +VH  + +SG+ + D  + + ++ ++   G +   R+VF ++
Sbjct: 177 ASLVTACGRSGSMFREGVQVHGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCSRKVFEEM 235

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--------LAV 210
            +  V  W  LM  YS  G  +E + ++K  +SLG           L+         +++
Sbjct: 236 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKD-ESLGRQIIGQVVKSGLESKLAVENSLISM 294

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
           +G+   V  A+ +FD++S+RD +SWN + + Y  NG  E+   +F  M      V+  T+
Sbjct: 295 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 354

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            T+LS   +     +GR +H   +K  F   +   NTLL MY+  G    A  VF++M  
Sbjct: 355 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 414

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + ++SW S++A +  +G    A+ L   M+  G   +    TS L AC      E G+ +
Sbjct: 415 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 474

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL------ 444
           H  +  + +  +  + NAL+ MY K G M+++  V  QMP +D+V+WN +IG        
Sbjct: 475 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP 534

Query: 445 DLFVAMLQNFEPDGV-----TMACILPACASLA-ALERGREIHGYILRHGISADRNVANA 498
           D  +A  Q    +GV     T+  +L AC      LERG+ +H YI+  G  +D +V N+
Sbjct: 535 DKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNS 594

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           ++ MY KCG L  ++ LF+ +  +++I+W  M+A    HG G + +   + MR  G+  D
Sbjct: 595 LITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLD 654

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH----YACMVDLLSRTGNLSEA 614
           + SF   L A +   +++EG +   +      ++   EH    +    D+ S+ G + E 
Sbjct: 655 QFSFSEGLSAAAKLAVLEEGQQLHGLA-----VKLGFEHDSFIFNAAADMYSKCGEIGEV 709

Query: 615 YRFIEMMPVAPDATI--WGSLLCGCRIH 640
              ++M+P + + ++  W  L+     H
Sbjct: 710 ---VKMLPPSVNRSLPSWNILISALGRH 734



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 246/544 (45%), Gaps = 70/544 (12%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           G+ VH++ C  G+V    +  + L+ M+   G +K  R +F+ +       WN +M    
Sbjct: 91  GRAVHAL-CVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIV 149

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------------------ 216
           + G + E +  F+KM  LGI   S+  + ++      G+  R                  
Sbjct: 150 RVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 209

Query: 217 ---------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                          V  + K+F+E+ DR+VVSW  ++ GY   G  E+ ++++K+    
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDE--- 266

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
                                   GR +    +K+    +++  N+L+ M    G++D A
Sbjct: 267 ----------------------SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 304

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F++M ER  +SW S+ A YA+ G  + + R+F  M R   E +   ++++L      
Sbjct: 305 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 364

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
              + G+ +H  + +    S + V N L+ MYA  G   +A  VF QMP KD++SWN+++
Sbjct: 365 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 424

Query: 442 G----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      AL L  +M+ + +  + VT    L AC +    E+GR +HG ++  G+ 
Sbjct: 425 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF 484

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
            ++ + NA+V MY K G +  +R +   +P +D+++W  +I GY        A+A F  M
Sbjct: 485 YNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 544

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
           R  G+  + ++ +SVL AC   G + E  +  +        E        ++ + ++ G+
Sbjct: 545 RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 604

Query: 611 LSEA 614
           LS +
Sbjct: 605 LSSS 608



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 209/433 (48%), Gaps = 39/433 (9%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           RVK A  LFD +  R+ VSWN M+SG +  G+  +G+E F++M +LG       + ++++
Sbjct: 122 RVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVT 181

Query: 276 GCANCGALMF-GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            C   G++   G  VH F  K+    ++  +  +L +Y   G +  + +VFE+M +R+VV
Sbjct: 182 ACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVV 241

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SWTS++ GY+ +G  +  I             D+Y   S            +G+ +   +
Sbjct: 242 SWTSLMVGYSDKGEPEEVI-------------DIYKDES------------LGRQIIGQV 276

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL-------- 446
            ++ ++S L V N+L+ M    G++  A  +F+QM  +D +SWN++  A           
Sbjct: 277 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF 336

Query: 447 -FVAMLQNF--EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
              ++++ F  E +  T++ +L     +   + GR IHG +++ G  +   V N ++ MY
Sbjct: 337 RIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 396

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
              G  V A  +F  +P KDLISW  ++A +   G   DA+     M  +G   + V+F 
Sbjct: 397 AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 456

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           S L AC      ++G     ++        ++   A +V +  + G +SE+ R +  MP 
Sbjct: 457 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVLLQMP- 514

Query: 624 APDATIWGSLLCG 636
             D   W +L+ G
Sbjct: 515 RRDVVAWNALIGG 527



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 169/355 (47%), Gaps = 25/355 (7%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           GRAVHA  +K      +   NTL++MY+K G +  A  +F+ M  R+ VSW +M++G  R
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG-LLEIGKDVHDYIKENDMQSSLY 404
            G++   +  FR M   GI+P  + I S++ AC   G +   G  VH ++ ++ + S +Y
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACI 464
           VS A++ +Y   G ++ +  VF +MP +++VSW +      L V      EP+ V     
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS------LMVGYSDKGEPEEVI---D 261

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           +    SL     GR+I G +++ G+ +   V N+++ M    G +  A  +FD +  +D 
Sbjct: 262 IYKDESL-----GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 316

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           ISW  + A Y  +G   ++   F+ MR+   E +  +  ++L    H      G     +
Sbjct: 317 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 376

Query: 585 MRYECNIEPKLEHYACMVDLLSR----TGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           +     ++   +   C+ + L R     G   EA    + MP   D   W SL+ 
Sbjct: 377 V-----VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMA 425



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 5/144 (3%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            +NA +      G+ E+ ++ L S  +S    +D  ++   L   A L  LE+G+++H +
Sbjct: 622 TWNAMLAANAHHGHGEEVLK-LVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 680

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             + G   D  +  +    M+  CG++ E  ++     N  +  WN+L+    + G F+E
Sbjct: 681 AVKLGFEHDSFIFNAA-ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEE 739

Query: 182 SLYLFKKMQSLGIAADSYTFSCVL 205
               F +M  +GI     TF  +L
Sbjct: 740 VCATFHEMLEMGIKPGHVTFVSLL 763


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 273/805 (33%), Positives = 438/805 (54%), Gaps = 50/805 (6%)

Query: 75  EVGNLEKAMEVLYSSEKSKID--TKTYCSILQLC-ADLKSLEDGKKVHSIICESGIVIDD 131
           ++G+ E+A+ +  S +   +    + + ++L  C AD + LE+G+++H ++  + +  D 
Sbjct: 76  QIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDH 135

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
            V  + L+ M+  C  +++ R+VF+ I + +V  WN ++  Y++  + ++++ +F  M  
Sbjct: 136 YV-STTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLL 194

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVK-------------------------------DA 220
            G+ A+  TF  VL   + + +    K                               D 
Sbjct: 195 EGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDL 254

Query: 221 HKLFDELSDR--DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
            + F   S    +++    MI+ Y      ++ LE+FK ML  G  +D    + VL+ C+
Sbjct: 255 EQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACS 314

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
               L  GR +H F  +  F + ++  N L++MY KCG L+ A+ VF  M  R V+SW +
Sbjct: 315 GPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNT 374

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +IA + +      A+ L   M  +G++ D  +  + L  CA    L  G+ +H +I E+ 
Sbjct: 375 IIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESG 434

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-----------LDLF 447
           +++ + + NA++DMY  C S  DA  VF  M V+D VSWN MI A           L LF
Sbjct: 435 IKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLF 494

Query: 448 VAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M L  F PD ++    L ACA+ A+L  G+ +H  I   G+ ++  VANA+++MY K 
Sbjct: 495 QQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKS 554

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G LVLAR +F  +P  D+ISW  MI+ +  HG     +  F  M   G  P++V+F+SV+
Sbjct: 555 GTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVV 614

Query: 567 YACSHSGLVDEGWRFFNMMRYE-CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
            ACSH GLV +G + F  + ++   I P+ EHY CMVDL++R G L  A +FI   P+ P
Sbjct: 615 SACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKP 674

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
           D  I  ++L   ++H +V+ A K AEH+ EL PD +  YV+L+N+Y E  K +E  K+R 
Sbjct: 675 DRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRR 734

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +  + ++K P  S I +K +V+ F  G +++    +I   L+RL LEM + GY P T  
Sbjct: 735 LMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDTTL 794

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L +  + +K+  L  HSEKLA+AFG+++   G ++R+ KNLRVCGDCH   KF+SK   
Sbjct: 795 MLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISKITG 854

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REIV+RDS+RFHHF +G CSC  +W
Sbjct: 855 REIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  265 bits (678), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 176/595 (29%), Positives = 287/595 (48%), Gaps = 63/595 (10%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDG-VLGSKLVFMFVTCGDLKEGRRVFNK 157
           Y  +L + AD +SL+ GK+VH+ IC+S +  D G  +G  LV M+V CG L + +  F++
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAM--DRGPFMGDLLVRMYVDCGSLIDAKACFDR 58

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------------ 205
           +       W  L+  + + G+ +++L+LF+ MQ  G+A  +  F  VL            
Sbjct: 59  MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEE 118

Query: 206 ---------------------KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
                                  L + G    V+DA K+FD +  + VV WN MI+ Y  
Sbjct: 119 GRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQ 178

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK---- 300
               E+ ++VF  ML  G   +  T + VL  C+    L   + V     K C  +    
Sbjct: 179 QDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLV-----KLCVEEREHD 233

Query: 301 ---EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
              + SF   L++ Y  CGDL+ A R F +     +++ T+MI  Y +   +D A+ LF+
Sbjct: 234 HLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILA-TAMITQYTQRERWDEALELFK 292

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M+ EG++ D  A  ++L+AC+    LE G+ +H +++E      +   NAL++MY KCG
Sbjct: 293 VMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCG 352

Query: 418 SMADAESVFNQMPVKDIVSWNTMIGALD-----------LFVAMLQNFEPDGVTMACILP 466
           S+ +A  VF  M  +D++SWNT+I A             L +  L   + D ++    LP
Sbjct: 353 SLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALP 412

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
            CA+  AL +GR IH +I+  GI AD  + NAI+DMY  C     A  +F  +  +D +S
Sbjct: 413 LCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVS 472

Query: 527 WTIMIAGYGMHG-FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           W  MI  Y        +A+  F  M+  G  PD +SF++ L AC+    + EG    + +
Sbjct: 473 WNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRI 532

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           R E  +E  +     ++++ +++G L  A +    MP+ PD   W  ++     H
Sbjct: 533 R-ETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPL-PDVISWNGMISAFAQH 585



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 234/496 (47%), Gaps = 25/496 (5%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC- 277
           DA   FD +  +D ++W  +I  +   G +E+ L +F+ M   G        V VL  C 
Sbjct: 51  DAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACS 110

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A+   L  GR +H          +   + TLL MY KC  ++ A +VF+ +  + VV W 
Sbjct: 111 ADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWN 170

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI--K 395
           +MI  YA++   + AI++F  M+ EG++ +      +L AC+    LE+ K V   +  +
Sbjct: 171 AMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEER 230

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           E+D       + AL++ Y  CG +  A   F++  ++ I++   MI           AL+
Sbjct: 231 EHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILA-TAMITQYTQRERWDEALE 289

Query: 446 LF-VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           LF V +L+  + D +    +L AC+    LE GR IHG++         N  NA+++MY 
Sbjct: 290 LFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYG 349

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG L  A  +F  +  +D+ISW  +IA +G H    +A+   + M+  G++ D++SF++
Sbjct: 350 KCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVN 409

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
            L  C+ S  + +G R  +    E  I+  +     ++D+     +  +A R    M V 
Sbjct: 410 ALPLCATSEALAKG-RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVR 468

Query: 625 PDATIWGSLLCG----CRIHHE-VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            D   W +++       R+  E + L +++  H F   PD    +V   +  A      E
Sbjct: 469 -DQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGF--MPDVIS-FVAALSACAAQASLAE 524

Query: 680 VKKLREKISRRGLKKN 695
            K L ++I   GL+ N
Sbjct: 525 GKLLHDRIRETGLESN 540



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 179/384 (46%), Gaps = 17/384 (4%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L   A+  +L  G+ VHA   K+   +     + L+ MY  CG L  A   F++M  + 
Sbjct: 4   LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG-LLEIGKDVH 391
            ++W  +I  + + G  + A+ LFR M  EG+ P      ++L AC+ D  LLE G+ +H
Sbjct: 64  ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---------- 441
             ++   M+S  YVS  L+ MY KC S+ DA  VF+ +  K +V WN MI          
Sbjct: 124 GVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183

Query: 442 GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYI--LRHGISADRNVANA 498
            A+ +F AM L+  + + +T   +L AC+ L  LE  + +   +    H    D + A A
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATA 243

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +V+ Y  CG L  A   F      +LI  T MI  Y       +A+  F  M   G++ D
Sbjct: 244 LVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLD 302

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            ++ ++VL ACS    ++EG      MR E   +  +     ++++  + G+L EA    
Sbjct: 303 RIACMAVLNACSGPRGLEEGRIIHGFMR-EIRFDRHVNAGNALINMYGKCGSLEEAVEVF 361

Query: 619 EMMPVAPDATIWGSLLCGCRIHHE 642
             M    D   W +++     H +
Sbjct: 362 RSMQ-HRDVISWNTIIAAHGQHSQ 384


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 287/867 (33%), Positives = 449/867 (51%), Gaps = 81/867 (9%)

Query: 44  SSCTINPISASISKTLVCKTK-----------NYNAEIGRFCEVGNLEKAMEVLYS--SE 90
           S+C+   +S S  + L C  +           +++A I  +   GN  +A  +      E
Sbjct: 56  SACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGE 115

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
             + +  +  S+L++      +   +++H     +G  +D G+  +  + M+  CG L++
Sbjct: 116 GLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAA-WITMYSRCGVLED 174

Query: 151 GRRVFNKID--NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS-YTFSCVLKC 207
            +RVF++       + +WN ++  Y   G + E L LF KM S+G+ A +  T++ V+  
Sbjct: 175 AQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNA 234

Query: 208 LAVVGNSR-------------------------------RVKDAHKLFDELSDRDVVSWN 236
               G  +                                ++ A +LF+ +S +DVVSWN
Sbjct: 235 CGSSGEEKYGAMVHGRIIKAGLEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWN 294

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFAL 294
            MI+     G  E  L +F+ ML +   V  +  T +++LS  +   AL  GR +HA   
Sbjct: 295 AMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIF 354

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           +     + S  N+L+  YSKC ++  A  +FE++  R ++SW SM+AGY +         
Sbjct: 355 RLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFD 414

Query: 355 LFRGMVREGIEPDVYAITSILHACACD--GLLEI--GKDVHDYIKENDMQS--SLYVSNA 408
           +F+ M+  GIEPD +++T I +A + D  GL+    GK++H YI         SL VSNA
Sbjct: 415 IFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNA 474

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNFEPD 457
           ++ MYAK   +ADAE +F  M  +D  SWN M+            L +F+ +L Q F  D
Sbjct: 475 ILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLD 534

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISAD-------RNVANAIVDMYVKCGVLV 510
            V+++ +L +C  L +L+ G++ H  + +     D        ++ NA++ MY KCG + 
Sbjct: 535 HVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIK 594

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            A  +F  +  KD+ SWT MI G   HG   +A+  F  M+  GI+P++V+F+++L AC+
Sbjct: 595 DAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACA 654

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM-----MPVAP 625
           H GLV EG  +F+ M  +  + P +EHYACM+DL  R+G    A   +E       P   
Sbjct: 655 HGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHD 714

Query: 626 DA-TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           D   +W  LL  C    ++ L  + A  + ELEP++   Y+LLAN+YA +  WE+  K+R
Sbjct: 715 DILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVR 774

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
           + +  +GL+K  GCSWI+   + ++FVAG   HP  K+I   L +L    +R GY P T 
Sbjct: 775 KAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTE 834

Query: 745 YALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ-TIRVTKNLRVCGDCHEMAKFMSKT 803
             L + DE EKE  L  HSEKLA++FG+LN   G   IRV KNLRVC DCH   KF S  
Sbjct: 835 LVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLL 894

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +REI+LRDS RFH F+DG CSC  +W
Sbjct: 895 EKREILLRDSQRFHLFRDGSCSCGDYW 921


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/731 (36%), Positives = 406/731 (55%), Gaps = 82/731 (11%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
           WN+ +  Y +TG   E+L +FK+M      + +   S  L+       +   + A  LFD
Sbjct: 62  WNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLR-------NGEFELARMLFD 114

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG---- 281
           E+ +RD+VSWN MI GY+ N    K  E+F+ M       D+ +  T+LSG A  G    
Sbjct: 115 EMPERDLVSWNVMIKGYVRNRNLGKARELFERMPER----DVCSWNTILSGYAQNGCVDD 170

Query: 282 -----------------ALMFGRAVHAFALKACF---SKE----ISFNNTLLDMYSKCGD 317
                            AL+     ++   +AC    S+E    +S+N  LL  + K   
Sbjct: 171 ARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWN-CLLGGFVKKKK 229

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           +  A + F+ M  R VVSW ++I GYA+ G  D A +LF     E    DV+  T+++  
Sbjct: 230 IVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFD----ESPVHDVFTWTAMVSG 285

Query: 378 CACDGLLEIGKDVHDYIKEN------------------DMQSSLY---------VSNALM 410
              + ++E  +++ D + E                   +M   L+           N ++
Sbjct: 286 YIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMI 345

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGV 459
             YA+CG +++A+++F++MP +D VSW  MI           AL LFV M  +    +  
Sbjct: 346 TGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRS 405

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           + +  L  CA + ALE G+++HG +++ G      V NA++ MY KCG +  A  LF  +
Sbjct: 406 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 465

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
             KD++SW  MIAGY  HGFG +A+  F  M++ G++PD+ + ++VL ACSH+GLVD+G 
Sbjct: 466 AGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 525

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
           ++F+ M  +  + P  +HYACMVDLL R G L EA+  ++ MP  PDA IWG+LL   R+
Sbjct: 526 QYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRV 585

Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
           H   +LAE  A+ +F +EP+N+G YVLL+N+YA + +W +V KLR ++  +G+KK PG S
Sbjct: 586 HGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYS 645

Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
           WIEI+ K + F  G   HP   +I + L+ L L MK+ GY  KT   L + +E EKE  +
Sbjct: 646 WIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMV 705

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
             HSE+LA+A+GI+ + +G+ IRV KNLRVC DCH   K+M+K   R I+LRD+NRFHHF
Sbjct: 706 RYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHF 765

Query: 820 KDGRCSCRGFW 830
           KDG CSC  +W
Sbjct: 766 KDGSCSCGDYW 776



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 134/539 (24%), Positives = 213/539 (39%), Gaps = 93/539 (17%)

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           K   K   +  D D+  WN  IS Y+  G   + L VFK M     +V    M+   SG 
Sbjct: 45  KSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWS-SVSYNAMI---SGY 100

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
              G     R +          +++   N ++  Y +  +L  A  +FE+M ER V SW 
Sbjct: 101 LRNGEFELARML----FDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWN 156

Query: 338 SMIAGYAREGVFDGAIRLFRGM-----VREGIEPDVYAITSILHA--------------- 377
           ++++GYA+ G  D A R+F  M     V        Y   S L                 
Sbjct: 157 TILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVS 216

Query: 378 --CACDGLLEIGKDVHDYIKENDMQSSLYVS-NALMDMYAKCGSMADAESVFNQMPVKDI 434
             C   G ++  K V      + M+    VS N ++  YA+ G + +A  +F++ PV D+
Sbjct: 217 WNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDV 276

Query: 435 VSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYI 484
            +W  M+           A +LF  M +  E   V+   +L        +E  +E+    
Sbjct: 277 FTWTAMVSGYIQNRMVEEARELFDRMPERNE---VSWNAMLAGYVQGERVEMAKEL---- 329

Query: 485 LRHGISADRNVA--NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
               +   RNV+  N ++  Y +CG +  A++LFD +P +D +SW  MIAGY   G   +
Sbjct: 330 --FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYE 387

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACS-----------HSGLVDEGWRF-------FNM 584
           A+  F  M + G   +  SF S L  C+           H  LV  G+           +
Sbjct: 388 ALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 447

Query: 585 MRYEC-NIE-----------PKLEHYACMVDLLSRTGNLSEAYRFIEMMP---VAPDATI 629
           M  +C +IE             +  +  M+   SR G   EA RF E M    + PD   
Sbjct: 448 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDAT 507

Query: 630 WGSLLCGCRIHHEVKLAEKVAEHVFELEPD-----NTGYYVLLANVYAEAEKWEEVKKL 683
             ++L  C       L +K  ++   +  D     N+ +Y  + ++   A   EE   L
Sbjct: 508 MVAVLSAC---SHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNL 563



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 134/330 (40%), Gaps = 68/330 (20%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           ++  +  CG + E + +F+K+       W  ++  YS++G+  E+L LF  M+  G   +
Sbjct: 344 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLN 403

Query: 198 SYTFSCVLKCLA------------------------VVGNS--------RRVKDAHKLFD 225
             +FS  L   A                         VGN+          +++A+ LF 
Sbjct: 404 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 463

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
           E++ +D+VSWN MI+GY  +G  E+ L  F+ M   G   D ATMV VLS C++ G +  
Sbjct: 464 EMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK 523

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           GR                        Y      D  +R   +        +  M+    R
Sbjct: 524 GR-----------------------QYFHTMTQDYGVRPNSQ-------HYACMVDLLGR 553

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS-LY 404
            G+ + A  L + M     EPD     ++L A    G  E+ +   D I   + ++S +Y
Sbjct: 554 AGLLEEAHNLMKNMP---FEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 610

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           V   L ++YA  G   D   +  +M  K +
Sbjct: 611 V--LLSNLYASSGRWGDVGKLRVRMRDKGV 638



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 10/215 (4%)

Query: 65  NYNAEIGRFCEVGNLEKAME--VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G+  +A+   VL   E  +++  ++ S L  CAD+ +LE GK++H  +
Sbjct: 371 SWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 430

Query: 123 CESGIVIDDG-VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            + G   + G  +G+ L+ M+  CG ++E   +F ++    +  WN ++  YS+ G  +E
Sbjct: 431 VKGGY--ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEE 488

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
           +L  F+ M+  G+  D  T   VL   +  G    V    + F  ++    V  N     
Sbjct: 489 ALRFFESMKREGLKPDDATMVAVLSACSHTG---LVDKGRQYFHTMTQDYGVRPNSQHYA 545

Query: 242 YIANGVAEKGL--EVFKEMLNLGFNVDLATMVTVL 274
            + + +   GL  E    M N+ F  D A   T+L
Sbjct: 546 CMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLL 580


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/769 (33%), Positives = 423/769 (55%), Gaps = 34/769 (4%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  +++ CA +  +  G  VH ++ ++G+V +D  +G+ LV  + T G + +  ++
Sbjct: 186 DNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLV-EDLFVGNALVSFYGTHGFVSDALKL 244

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGN----------FKESLYLFKKMQSLGIAADSYTFSCV 204
           F+ +    +  WN ++  +S  G+              L +  + + +G+    + ++  
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVK 304

Query: 205 LKC--LAVVGNSRR--------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
           L      VV N+          + D+  +F   ++++VVSWN M+ G+ A G      ++
Sbjct: 305 LSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDL 364

Query: 255 FKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
            ++ML    +V  D  T++  +  C +   L   + +H ++LK  F  +    N  +  Y
Sbjct: 365 LRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASY 424

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           +KCG L  A RVF  +  +++ SW ++I GYA+      ++     M   G+ PD + + 
Sbjct: 425 AKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVC 484

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           S+L AC+    L +GK+VH +I  N ++  L+V  +++ +Y  CG +   + +F+ M   
Sbjct: 485 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDN 544

Query: 433 DIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIH 481
            +VSWNT+I           AL LF  M L   +P G++M  +  AC+ L +L  GRE H
Sbjct: 545 SLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAH 604

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
            Y L+H +  +  +A +I+DMY K G +  +  +F+ +  K   SW  MI GYGMHG   
Sbjct: 605 AYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAK 664

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
           +AI  F +M++ G  PD+++F+ VL AC+HSGL+ EG R+ + M+    ++P L+HYAC+
Sbjct: 665 EAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACV 724

Query: 602 VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNT 661
           +D+L R G L  A R    M   PD  IW SLL  CRIH  +++ EKVA  +F LEP+  
Sbjct: 725 IDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKP 784

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK 721
             YVLL+N+YA   KW++V+++R+++    L+K+ GCSWIE+ GKV  FV G       +
Sbjct: 785 ENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFE 844

Query: 722 KIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
           +I+SL   L +++ + GY P T     +  E EK   L GHSEKLA+ +G++    G T+
Sbjct: 845 EIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTL 904

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           RV KNLR+C DCH  AK +SK   REIV+RD+ RFHHF  G CSC  +W
Sbjct: 905 RVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 197/682 (28%), Positives = 333/682 (48%), Gaps = 70/682 (10%)

Query: 70  IGRFCEVGNLEKAMEVLY--------SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           I  FCE G+L+K+  V+         SS+   +  +    +LQ     K +E G+K+H +
Sbjct: 50  ISNFCETGDLDKSFRVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHL 109

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +  S  +  D VL ++++ M+  CG   + R  F+ + +  +F WN ++  YS+   + E
Sbjct: 110 VSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHE 169

Query: 182 SLYLFKKMQS-LGIAADSYTFSCVLKC----------LAV--------------VGNSRR 216
            L +F KM S   +  D++TF CV+K           LAV              VGN+  
Sbjct: 170 VLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALV 229

Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   V DA KLFD + +R++VSWN MI  +  NG  + G           F  D+A
Sbjct: 230 SFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG--DDG----------AFMPDVA 277

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+VTVL  CA    +  G+ VH +A+K    KE+  NN L+DMYSK G +  +  +F+  
Sbjct: 278 TVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLN 337

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMV--REGIEPDVYAITSILHACACDGLLEI 386
             ++VVSW +M+ G++ EG   G   L R M+   E ++ D   I + +  C  + +L  
Sbjct: 338 NNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPS 397

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
            K++H Y  + +      ++NA +  YAKCGS++ A+ VF+ +  K + SWN +IG    
Sbjct: 398 LKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQ 457

Query: 443 ------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 +LD  + M  +   PD  T+  +L AC+ L +L  G+E+HG+I+R+ +  D  V
Sbjct: 458 SSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 517

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
             +++ +Y+ CG L   + LFD +    L+SW  +I G+  +GF   A+  F  M   GI
Sbjct: 518 YLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGI 577

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           +P  +S ++V  ACS    +  G R  +    +  +E        ++D+ ++ G ++++ 
Sbjct: 578 QPCGISMMTVFGACSLLPSLRLG-REAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSS 636

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDNTGYYVLLANVYAE 673
           +    +     A+ W +++ G  +H   K A K+ E +      PD+  +  +L      
Sbjct: 637 KVFNGLKEKSAAS-WNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHS 695

Query: 674 AEKWEEVKKLREKISRRGLKKN 695
               E ++ L +  S  GLK N
Sbjct: 696 GLLHEGLRYLDQMKSSFGLKPN 717


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/653 (37%), Positives = 371/653 (56%), Gaps = 24/653 (3%)

Query: 193 GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL 252
           G AAD++  S + K    +    R  DA K+FD +   D V WN +++G   +    + L
Sbjct: 153 GFAADNFVASALAKLYFTLS---RGNDARKVFDAVPSPDTVLWNTLLAGLSGS----EAL 205

Query: 253 EVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           E F  M   G    D  T+ +VL   A       GR VHAF  K   ++       L+ +
Sbjct: 206 EAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISL 265

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+KCGD++ A  +F++M    +V++ ++I+GY+  G+   ++ LF+ +V  G+ P    +
Sbjct: 266 YAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTL 325

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            +++   +  G   +   +H ++ +  + ++  VS AL  +Y +   M  A   F+ MP 
Sbjct: 326 VALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPE 385

Query: 432 KDIVSWNTMI------GALDLFVAMLQ-----NFEPDGVTMACILPACASLAALERGREI 480
           K + SWN MI      G  ++ VA+ Q     N  P+ +T++  L ACA L AL  G+ +
Sbjct: 386 KTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWV 445

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           H  I    +  +  V  A++DMYVKCG +  AR +FD +  K+++SW +MI+GYG+HG G
Sbjct: 446 HKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQG 505

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
            +A+  + DM  A + P   +F+SVLYACSH GLV EG   F  M  +  I P +EH  C
Sbjct: 506 AEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTC 565

Query: 601 MVDLLSRTGNLSEAYRFIEMMP---VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           MVDLL R G L EA+  I   P   V P   IWG+LL  C +H +  LA+  ++ +FELE
Sbjct: 566 MVDLLGRAGQLKEAFELISEFPKSAVGPG--IWGALLGACMVHKDGDLAKLASQKLFELE 623

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           P+NTGYYVLL+N+Y   +++ E   +R++   R L K PGC+ IEI  + ++F+AG  +H
Sbjct: 624 PENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAH 683

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
           P +  I   L++L  +M   GY P T  AL + +E EKE  +  HSEKLA+AFG+LN   
Sbjct: 684 PQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEP 743

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G  IR+ KNLRVC DCH   K +SK  +R IV+RD++RFHHF+DG CSC  +W
Sbjct: 744 GTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 229/498 (45%), Gaps = 54/498 (10%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           + +H++   SG   D+ V  S L  ++ T     + R+VF+ + +    +WN L+   S 
Sbjct: 143 RPLHALAVASGFAADNFV-ASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSG 201

Query: 176 TGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSRRVKDAH------------- 221
           +    E+L  F +M   G +  DS T + VL   A V N+   +  H             
Sbjct: 202 S----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEH 257

Query: 222 -------------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                               LFD +   D+V++N +ISGY  NG+    +E+FKE++ +G
Sbjct: 258 VVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMG 317

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
                +T+V ++   +  G       +HA  +KA        +  L  +Y +  D+D A 
Sbjct: 318 LRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSAR 377

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
           R F+ M E+++ SW +MI+GYA+ G+ + A+ LF+ M    + P+   I+S L ACA  G
Sbjct: 378 RAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLG 437

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
            L +GK VH  I    ++ ++YV  AL+DMY KCGS+A+A  +F+ M  K++VSWN MI 
Sbjct: 438 ALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMIS 497

Query: 443 ----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGIS 490
                     AL L+  M+  +  P   T   +L AC+    ++ G  +   +   +GI+
Sbjct: 498 GYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGIT 557

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS--WTIMIAGYGMHGFGCDAIATFN 548
                   +VD+  + G L  A  L    P   +    W  ++    +H  G   +A   
Sbjct: 558 PGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDG--DLAKLA 615

Query: 549 DMRQAGIEPDEVSFISVL 566
             +   +EP+   +  +L
Sbjct: 616 SQKLFELEPENTGYYVLL 633



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 186/395 (47%), Gaps = 20/395 (5%)

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           R +HA A+ + F+ +    + L  +Y      + A +VF+ +     V W +++AG +  
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS 202

Query: 347 GVFDGAIRLF-RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
              +  +R+   G VR    PD   + S+L A A      +G+ VH + ++  +    +V
Sbjct: 203 EALEAFVRMAGAGSVR----PDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNF 454
              L+ +YAKCG M  A  +F++M   D+V++N +I           +++LF  ++    
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            P   T+  ++P  +          +H ++++ G+ A+  V+ A+  +Y +   +  AR 
Sbjct: 319 RPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARR 378

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
            FD +P K + SW  MI+GY  +G    A+A F  M+   + P+ ++  S L AC+  G 
Sbjct: 379 AFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGA 438

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           +  G     ++  E  +E  +     ++D+  + G+++EA    + M    +   W  ++
Sbjct: 439 LSLGKWVHKIIANE-KLELNVYVMTALIDMYVKCGSIAEARCIFDSMD-NKNVVSWNVMI 496

Query: 635 CGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL 667
            G  +H +   A K+ + + +  L P ++ +  +L
Sbjct: 497 SGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVL 531



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 3/144 (2%)

Query: 64  KNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSI 121
           +++NA I  + + G  E A+ +    +   +  +  T  S L  CA L +L  GK VH I
Sbjct: 389 ESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKI 448

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I    + ++  V+ + L+ M+V CG + E R +F+ +DN  V  WN+++  Y   G   E
Sbjct: 449 IANEKLELNVYVM-TALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAE 507

Query: 182 SLYLFKKMQSLGIAADSYTFSCVL 205
           +L L+K M    +   S TF  VL
Sbjct: 508 ALKLYKDMMDAHLHPTSSTFLSVL 531


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/787 (34%), Positives = 425/787 (54%), Gaps = 52/787 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  +++ CA +  ++ G  VH ++ ++ +V +D  + + LV  + T G + +  RV
Sbjct: 183 DNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLV-EDVFVSNALVSFYGTNGSVSDALRV 241

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM----QSLGIAADSYTFSCVLKCLA- 209
           F  +    +  WN ++  +S  G  +E   L  +M      +    D  T + VL   A 
Sbjct: 242 FKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCAR 301

Query: 210 -----------------------VVGNSRR--------VKDAHKLFDELSDRDVVSWNCM 238
                                  VV N+          + DA  +F   ++++VVSWN M
Sbjct: 302 DREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTM 361

Query: 239 ISGYIANGVAEKGLEVFKEMLNLG--FNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
           + G+ A G   K  ++ ++ML  G     D  T++  +  C     L   + +H ++LK 
Sbjct: 362 VGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQ 421

Query: 297 CFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
            F        N  +  Y+KCG L  A RVF  +  ++V SW ++I GY++      ++  
Sbjct: 422 EFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDA 481

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           +  M   G+ PD++ + S+L AC+    L++GK+VH  I  N ++   +V  +L+ +Y  
Sbjct: 482 YFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIH 541

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACI 464
           CG ++ A  +F+ M  K +VSWNTM+           AL LF  M L   +P  ++M  +
Sbjct: 542 CGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSV 601

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
             AC+ L +L  GRE HGY L+  +  +  +A +++DMY K G ++ +  +F+ +  + +
Sbjct: 602 FGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSV 661

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
            SW  M+ GYG+HG   +AI  F +M++ G  PDE++F+ VL AC+HSGLV EG  + + 
Sbjct: 662 ASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQ 721

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF-IEMMPVAPDATIWGSLLCGCRIHHEV 643
           M+    + P L+HYAC++D+L R G L EA +   E M   P   IW  LL  CRIH  +
Sbjct: 722 MKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNL 781

Query: 644 KLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
           ++ EK+A  +F  EP+    YVLL+N+YA + KW+EV+K+R+++    L+K+ GCSWIE+
Sbjct: 782 EMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIEL 841

Query: 704 KGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHS 763
            GKV  FVAG SS    ++I+SL   L  E+ + GY P T     +  E EK   L GHS
Sbjct: 842 NGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHS 901

Query: 764 EKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGR 823
           EKLA+ +G++    G T+RV KNLR+C DCH  AK +SK   REIV+RD+ RFHHFK+G 
Sbjct: 902 EKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGF 961

Query: 824 CSCRGFW 830
           CSC  +W
Sbjct: 962 CSCGDYW 968



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 197/683 (28%), Positives = 338/683 (49%), Gaps = 64/683 (9%)

Query: 31  PSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGN----LEKAMEVL 86
           P    +  S +SH   TI P + ++S T     ++    +   CE GN    + + +E  
Sbjct: 9   PQLSTLFDSRRSHKKSTI-PRAVAVSST-STNGEHLLRRVSGLCETGNPPQGVLQVIEEF 66

Query: 87  YSSEKSKIDT-----KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM 141
              EKS  D      +    +LQ     K ++ G+K+H ++ ES  + +D VL ++++ M
Sbjct: 67  DREEKSSSDAFLLLREALGLLLQASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITM 126

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYT 200
           +  CG   + R VF+ +    +F WN ++  YS+   +   L +F KM    G+  D++T
Sbjct: 127 YSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFT 186

Query: 201 FSCVLKCLAVV--------------------------------GNSRRVKDAHKLFDELS 228
           F CV+K  A V                                G +  V DA ++F  + 
Sbjct: 187 FPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMP 246

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEML----NLGFNVDLATMVTVLSGCANCGALM 284
           +R++VSWN MI  +  NG++E+   +  +M+     + F  D+AT+ TVL  CA    + 
Sbjct: 247 ERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIG 306

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            G+ VH  A+K    KE+  NN L+DMYSKCG ++ A  +F+    ++VVSW +M+ G++
Sbjct: 307 VGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFS 366

Query: 345 REGVFDGAIRLFRGMVREG--IEPDVYAITSILHACACDGLLEIGKDVHDY-IKENDMQS 401
             G       L R M+  G  +  D   I + +  C  + +L   K++H Y +K+  + +
Sbjct: 367 AAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHN 426

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
           +  V+NA +  YAKCGS++ A  VF  +  K + SWN +IG          +LD +  M 
Sbjct: 427 NELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMK 486

Query: 452 QN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
            +   PD  T+  +L AC+ + +L+ G+E+HG I+R+ +  D  V  +++ +Y+ CG L 
Sbjct: 487 SSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELS 546

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            A  LFD +  K L+SW  M+ GY  +GF   A++ F  M   G++P E+S +SV  ACS
Sbjct: 547 TAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACS 606

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
               +  G R  +    +C +E        ++D+ ++ G++ E+++    +     A+ W
Sbjct: 607 LLPSLRLG-REAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVAS-W 664

Query: 631 GSLLCGCRIHHEVKLAEKVAEHV 653
            +++ G  IH   K A K+ E +
Sbjct: 665 NAMVMGYGIHGRAKEAIKLFEEM 687



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 146/343 (42%), Gaps = 44/343 (12%)

Query: 57  KTLVCKTKNYNAEIGRFCEVGNLEKAME-----VLYSSEKSKIDTKTYCSILQLCADLKS 111
           KTLV    ++N  +  + + G  E+A+      VLY  +  +I   +  S+   C+ L S
Sbjct: 558 KTLV----SWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEI---SMMSVFGACSLLPS 610

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           L  G++ H    +  ++ D+  +   ++ M+   G + E  +VFN +    V  WN ++ 
Sbjct: 611 LRLGREAHGYALKC-LLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVM 669

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS--- 228
            Y   G  KE++ LF++MQ  G   D  TF   L  L    +S  V +     D++    
Sbjct: 670 GYGIHGRAKEAIKLFEEMQRTGHCPDELTF---LGVLTACNHSGLVHEGLTYLDQMKTLF 726

Query: 229 --DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
             +  +  + C+I   +  G  ++ L++  E ++    V +     +LS C     L  G
Sbjct: 727 GMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNF--LLSSCRIHKNLEMG 784

Query: 287 RAVHAFALKACFSKEISFNNTLL--DMYSKCGDLDGAIRVFEKMGERSV-----VSWT-- 337
             +   A K   S+     N +L  ++Y+  G  D   +V ++M E S+      SW   
Sbjct: 785 EKI---AAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIEL 841

Query: 338 -----SMIAGYAREGVFDGAIRLFRGMVRE----GIEPDVYAI 371
                S +AG +    F+    L+  + RE    G  PD  ++
Sbjct: 842 NGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSV 884


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/571 (42%), Positives = 348/571 (60%), Gaps = 17/571 (2%)

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C +  +L  G  VH   L     ++      L+ MYS  G +D A +VF+K  +R++  W
Sbjct: 87  CGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD----GLLEIGKDVHD 392
            ++       G  +  + L+  M R G+E D +  T +L AC         L  GK++H 
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHA 206

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           ++      S +Y+   L+DMYA+ G +  A  VFN MPV+++VSW+ MI           
Sbjct: 207 HLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFE 266

Query: 443 ALDLFVAML---QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
           AL  F  M+   ++  P+ VTM  +L ACASLAALE+GR IHGYILR G+ +   V +A+
Sbjct: 267 ALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISAL 326

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           V MY +CG L + + +FD +  +D++SW  +I+ YG+HG+G  AI  F +M   G  P  
Sbjct: 327 VTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTP 386

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+F+SVL ACSH GLV+EG R F  M  +  I+P++EHYACMVDLL R   L EA + ++
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQ 446

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            M   P   +WGSLL  CRIH  V+LAE+ +  +F LEP N G YVLLA++YAEA+ W+E
Sbjct: 447 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 506

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           VK++++ +  RGL+K PG  W+E++ K+  FV+    +P  ++I + L +L  +MK +GY
Sbjct: 507 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGY 566

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P+T+  L   +  EKE  + GHSEKLA+AFG++N   G+ IR+TKNLR+C DCH   KF
Sbjct: 567 IPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKF 626

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +SK   +EI++RD NRFH FK+G CSC  +W
Sbjct: 627 ISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 227/476 (47%), Gaps = 58/476 (12%)

Query: 13  LFFSPPNQ-----SYGKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYN 67
           +F S P Q      Y   F    P   P+         C++   + SIS     K  N N
Sbjct: 1   MFLSHPPQVIQPNYYTVNFLPRSPLKPPL---------CSVALNNLSISSGAGAKISN-N 50

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
             I   C+ G L++A+ VL  S++S    +TY  ++  C    SL DG +VH  I ++G 
Sbjct: 51  QLIQSLCKEGKLKQALRVL--SQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNG- 107

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              D  L +KL+ M+   G +   R+VF+K     +++WN L    +  G+ +E L L+ 
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 167

Query: 188 KMQSLGIAADSYTFSCVLK-CLAV--------------VGNSRRVKDAH----------- 221
           KM  +G+ +D +T++ VLK C+A                  +RR  ++H           
Sbjct: 168 KMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMY 227

Query: 222 ----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLAT 269
                      +F+ +  R+VVSW+ MI+ Y  NG A + L  F+EM+      + +  T
Sbjct: 228 ARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVT 287

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           MV+VL  CA+  AL  GR +H + L+      +   + L+ MY +CG LD   RVF++M 
Sbjct: 288 MVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMH 347

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           +R VVSW S+I+ Y   G    AI++F  M+  G  P      S+L AC+ +GL+E GK 
Sbjct: 348 DRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407

Query: 390 VHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
           + + + +++ ++  +     ++D+  +   + +A  +   M  +     W +++G+
Sbjct: 408 LFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 130/312 (41%), Gaps = 43/312 (13%)

Query: 95  DTKTYCSILQLCA----DLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           D  TY  +L+ C         L  GK++H+ +   G      ++ + LV M+   G +  
Sbjct: 177 DRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIM-TTLVDMYARFGCVDY 235

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYTFSCVLKCL 208
              VFN +    V  W+ ++  Y+K G   E+L  F++M  ++   + +S T   VL+  
Sbjct: 236 ASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQAC 295

Query: 209 A--------------------------------VVGNSRRVKDAHKLFDELSDRDVVSWN 236
           A                                + G   ++    ++FD + DRDVVSWN
Sbjct: 296 ASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWN 355

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALK 295
            +IS Y  +G   K +++F+EML  G +    T V+VL  C++ G +  G R   +    
Sbjct: 356 SLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRD 415

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAGYAREGVFDGAIR 354
                ++     ++D+  +   LD A ++ + M  E     W S++      G  + A R
Sbjct: 416 HGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAER 475

Query: 355 LFRGMVREGIEP 366
             R +    +EP
Sbjct: 476 ASRRLF--ALEP 485


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/623 (39%), Positives = 362/623 (58%), Gaps = 12/623 (1%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A K F+ ++  ++ SWN +++ +  N      L++FK ML  G  VD   +V  +  C  
Sbjct: 66  ASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFG 125

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
                  +  H+ A+K     +      L+++Y++ G L+ A +VFE++  ++ V W  M
Sbjct: 126 LSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVM 185

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY-IKEND 398
           I G+       G   LF  M R G E D + +  ++ AC      + GK  H   IK+N 
Sbjct: 186 IKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNF 245

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFV 448
           + S+ ++  +L+DMY KCG +  A  +F ++  +D+V W+ +I           ++ +F 
Sbjct: 246 IDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFR 305

Query: 449 AMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            ML +   P+ VT A I+ AC+SL +L++GR +HGY++R+G+  D     + +DMY KCG
Sbjct: 306 QMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCG 365

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            +V A  +F  IP K++ SW+ MI G+GMHG   +A+  F +MR     P+ V+F+SVL 
Sbjct: 366 CIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLS 425

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSHSG ++EGW  F  M  +  I P  EHYACMVDLL R G + EA  FI  MP  P A
Sbjct: 426 ACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGA 485

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
           + WG+LL  CRIH   +LAE+VA+ +  LE D +G YV+L+N+YA+   WE VKK R K+
Sbjct: 486 SAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKM 545

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
             +G+ K  G + IEI+ K+ +F +         +IESL   L+  M+  GY P  R+ L
Sbjct: 546 CEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVL 605

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
            + D+  K+  LCGHSEKLA+ FG+LN   G  IR+TKN+RVCGDCH  +KF+S   RR+
Sbjct: 606 HDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRK 665

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           I++RD  RFHH +DG CSC  +W
Sbjct: 666 IIMRDVKRFHHVQDGVCSCGDYW 688



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 232/494 (46%), Gaps = 54/494 (10%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF-MFVTCGDLKE 150
           S+  TKT  S+ +     K+L    ++++ I  + +     +L   ++F  ++  G L  
Sbjct: 11  SRNPTKTLLSLFRFT---KTLASNHQLNAQILVNAL--HRSLLFGPMIFGAYIQLGSLHV 65

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--- 207
             + FN I    +  WN ++  +SK   F + L LFK+M   G   DS+     +K    
Sbjct: 66  ASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFG 125

Query: 208 -----------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
                                        + V      +++AHK+F+E+  ++ V W  M
Sbjct: 126 LSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVM 185

Query: 239 ISGYIANGVAEKGL-EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           I G++ N   E G+ E+F  M   GF +D   +  ++  C N  A   G+  H   +K  
Sbjct: 186 IKGHL-NFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKN 244

Query: 298 FSKEISFNNT-LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
           F     F  T L+DMY KCG LD A+++FE++  R VV W+++IAG+AR G    +I +F
Sbjct: 245 FIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMF 304

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
           R M+ + + P+     SI+ AC+  G L+ G+ VH Y+  N ++  +    + +DMYAKC
Sbjct: 305 RQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKC 364

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACIL 465
           G +  A  VF Q+P K++ SW+TMI           AL+LF  M   N  P+ VT   +L
Sbjct: 365 GCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVL 424

Query: 466 PACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
            AC+    +E G      + R +GI+        +VD+  + G +  A S  + +P +  
Sbjct: 425 SACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPG 484

Query: 525 IS-WTIMIAGYGMH 537
            S W  ++    +H
Sbjct: 485 ASAWGALLGACRIH 498



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 191/381 (50%), Gaps = 14/381 (3%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           T+LS       L     ++A  L     + + F   +   Y + G L  A + F  +   
Sbjct: 17  TLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFE 76

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           ++ SW +++A +++   F   ++LF+ M++EG   D + +   + AC    L +  K  H
Sbjct: 77  NLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFH 136

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---------- 441
               +  ++   YV+ ALM++Y + GS+ +A  VF ++P+K+ V W  MI          
Sbjct: 137 SLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEF 196

Query: 442 GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGY-ILRHGISADRNVANAI 499
           G  +LF  M ++ FE D   +  ++ AC ++ A + G+  HG  I ++ I ++  +  ++
Sbjct: 197 GVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSL 256

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY+KCG L  A  LF+ I  +D++ W+ +IAG+  +G   ++I+ F  M    + P+ 
Sbjct: 257 VDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNS 316

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+F S++ ACS  G + +G      M     +E  +++Y   +D+ ++ G +  AYR   
Sbjct: 317 VTFASIVLACSSLGSLKQGRSVHGYM-IRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFC 375

Query: 620 MMPVAPDATIWGSLLCGCRIH 640
            +P   +   W +++ G  +H
Sbjct: 376 QIP-EKNVFSWSTMINGFGMH 395



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 175/392 (44%), Gaps = 42/392 (10%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E   +D+      ++ C  L   +  K  HS+  +  +   D  +   L+ ++   G L+
Sbjct: 107 EGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLE-GDPYVAPALMNVYTELGSLE 165

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES---LYLFKKMQSLGIAADSYTFSCVLK 206
           E  +VF ++      IW +++  +    NF E      LF +M+  G   D +    +++
Sbjct: 166 EAHKVFEEVPLKNSVIWGVMIKGHL---NFSEEFGVFELFSRMRRSGFELDPFVVEGLIQ 222

Query: 207 CLAVVGNSRRVKDAH---------------------------------KLFDELSDRDVV 233
               V   +  K  H                                 KLF+E+S RDVV
Sbjct: 223 ACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVV 282

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
            W+ +I+G+  NG A + + +F++ML      +  T  +++  C++ G+L  GR+VH + 
Sbjct: 283 VWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYM 342

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           ++     ++    + +DMY+KCG +  A RVF ++ E++V SW++MI G+   G+   A+
Sbjct: 343 IRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEAL 402

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM-DM 412
            LF  M      P+     S+L AC+  G +E G      +  +   + +    A M D+
Sbjct: 403 NLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDL 462

Query: 413 YAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
             + G + +A S  N MP +   S W  ++GA
Sbjct: 463 LGRAGKIDEALSFINNMPTEPGASAWGALLGA 494


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/624 (39%), Positives = 359/624 (57%), Gaps = 42/624 (6%)

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           EK L V++ M   G  VD  +   +L   +   +L+ G  +H  A K  F  +      L
Sbjct: 104 EKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGL 163

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           + MY+ CG +  A  +F+KM  R VV+W+ MI GY + G+F+ A+ LF  M    +EPD 
Sbjct: 164 VRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDE 223

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM--------- 419
             ++++L AC   G L  GK +HD+I EN++    ++ +AL+ MYA CGSM         
Sbjct: 224 MMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEK 283

Query: 420 ----------------------ADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
                                  +A SVFNQM  KD+V W+ MI           AL+LF
Sbjct: 284 MTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLF 343

Query: 448 VAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M     +PD VTM  ++ ACA L AL++ + IH ++ ++G      + NA+++MY KC
Sbjct: 344 NEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKC 403

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G L  AR +FD +P K++ISWT MI+ + MHG    A+  F+ M    IEP+ ++F+ VL
Sbjct: 404 GSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVL 463

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
           YACSH+GLV+EG + F  M  E NI PK  HY CMVDL  R   L EA   +E MP+AP+
Sbjct: 464 YACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPN 523

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
             IWGSL+  CR+H E++L E  A+ + EL+PD+ G +V L+N+YA+A +WE+V ++R+ 
Sbjct: 524 VIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKL 583

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +  +G+ K  GCS  E+  +++ F+    SH HA +I   L  +  ++K  GY P T   
Sbjct: 584 MKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSI 643

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
           L++ +E EK+  +  HSEKLA+ +G++    G  IR+ KNLRVC DCH   K  SK   R
Sbjct: 644 LVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYER 703

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           EIV+RD  RFHH+KDG CSC+ +W
Sbjct: 704 EIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/537 (28%), Positives = 259/537 (48%), Gaps = 81/537 (15%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
           SL   K+VH+ I  S +     +L   ++        L     VFN I   +  + N  +
Sbjct: 35  SLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFL 94

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV------------------- 211
            E S++   +++L ++++M++ G+A D ++F  +LK L+ V                   
Sbjct: 95  RELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFD 154

Query: 212 -------GNSR------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
                  G  R      R+ +A  +FD++  RDVV+W+ MI GY  +G+    L +F+EM
Sbjct: 155 SDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEM 214

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
            N     D   + TVLS C   G L +G+ +H F ++     +    + L+ MY+ CG +
Sbjct: 215 KNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSM 274

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE---------------- 362
           D A+ +FEKM  +++V+ T+M+ GY++ G  + A  +F  MV++                
Sbjct: 275 DLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESD 334

Query: 363 ---------------GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
                          GI+PD   + S++ ACA  G L+  K +H ++ +N    +L ++N
Sbjct: 335 SPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINN 394

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEP 456
           AL++MYAKCGS+  A  +F++MP K+++SW  MI           AL  F  M  +N EP
Sbjct: 395 ALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEP 454

Query: 457 DGVTMACILPACASLAALERGREI-HGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           +G+T   +L AC+    +E GR+I +  I  H I+        +VD++ +  +L  A  L
Sbjct: 455 NGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALEL 514

Query: 516 FDMIP-AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS---FISVLYA 568
            + +P A ++I W  ++A   +HG     +  F   R   ++PD      F+S +YA
Sbjct: 515 VEAMPLAPNVIIWGSLMAACRVHGE--IELGEFAAKRLLELDPDHDGAHVFLSNIYA 569



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 203/415 (48%), Gaps = 66/415 (15%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D  ++  +L+  + +KSL +G ++H +  + G    D  + + LV M+  CG + E R 
Sbjct: 120 VDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGF-DSDPFVQTGLVRMYAACGRIAEARL 178

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           +F+K+ +  V  W++++  Y ++G F ++L LF++M++  +  D    S VL      GN
Sbjct: 179 MFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGN 238

Query: 214 -------------SRRVKDAH-------------------KLFDELSDRDVVS------- 234
                        +  V D H                    LF++++ +++V+       
Sbjct: 239 LSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTG 298

Query: 235 ------------------------WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                                   W+ MISGY  +   ++ L +F EM +LG   D  TM
Sbjct: 299 YSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTM 358

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           ++V++ CA+ GAL   + +H F  K  F   +  NN L++MY+KCG L+ A R+F+KM  
Sbjct: 359 LSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPR 418

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           ++V+SWT MI+ +A  G    A+R F  M  E IEP+      +L+AC+  GL+E G+ +
Sbjct: 419 KNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKI 478

Query: 391 -HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
            +  I E+++         ++D++ +   + +A  +   MP+  +++ W +++ A
Sbjct: 479 FYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAA 533


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 237/580 (40%), Positives = 357/580 (61%), Gaps = 17/580 (2%)

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
            + D  T   ++  C   GA+   R VH       +  +    NTL++MY K G LD A 
Sbjct: 12  LSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEAR 71

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
            +F++M +R+VVSWT+MI+ Y+   +   A+     M+REG+ P++Y  +S+L AC  DG
Sbjct: 72  NLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC--DG 129

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
           LL + + +H  I +  ++S ++V +AL+D Y+K G   DA +VFN+M   D+V WN++IG
Sbjct: 130 LLNL-RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIG 188

Query: 443 A----------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                      L L+  M + +F  D  T+  +L AC  LA LE GR++H ++L++    
Sbjct: 189 GFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKY--DQ 246

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFD-MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
           D  + NA++DMY KCG L  A  LF  M+  KD+ISW+ MIAG   +GF  DA+  F  M
Sbjct: 247 DLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAM 306

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
           +  G +P+ ++ + VL+ACSH+GLV++GW +F  M+    I+P  EHY C++DLL R G 
Sbjct: 307 KSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGK 366

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
           L EA + I  M   PDA  W  LL  CR+H  V LA   A+ + +L+P + G Y+LL+N+
Sbjct: 367 LDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNI 426

Query: 671 YAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL 730
           YA ++KWE+V ++R K+  RG+KK+PGCSWIE+  +V+ F+ G +SHP  ++I+  L +L
Sbjct: 427 YANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQL 486

Query: 731 RLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVC 790
              + R GY P T + L + +  + E +L  HSEKLA+ FG+++LP  +TI + KNLR+C
Sbjct: 487 IQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRIC 546

Query: 791 GDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           GDCH  AK +S+   R IV+RD  R+HHF+ G CSC  +W
Sbjct: 547 GDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 171/335 (51%), Gaps = 19/335 (5%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + +A  LFDE+ DR+VVSW  MIS Y  + +  K L+    ML  G   ++ T  +VL  
Sbjct: 67  LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
              C  L+  R +H   LK     ++   + L+D YSK G+   A+ VF +M    +V W
Sbjct: 127 ---CDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW 183

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            S+I G+A+    D  + L++ M R     D   +TS+L AC    LLE+G+ VH ++ +
Sbjct: 184 NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK 243

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIG----------ALD 445
            D    L ++NAL+DMY KCGS+ DA  +F +M   KD++SW+TMI           AL 
Sbjct: 244 YD--QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALK 301

Query: 446 LFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIVDMY 503
           LF AM  +  +P+ +T+  +L AC+    +  G      +  H GI   R     I+D+ 
Sbjct: 302 LFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLL 361

Query: 504 VKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMH 537
            + G L  A  L  +M    D ++W I++    +H
Sbjct: 362 GRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVH 396



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 193/397 (48%), Gaps = 40/397 (10%)

Query: 81  KAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF 140
           KAME ++ +  S  D  TY  +++ C    +++  + VH  +  +G      ++ + L+ 
Sbjct: 2   KAMEAMHRNRLSA-DAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINT-LIN 59

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+V  G L E R +F+++ +  V  W  ++  YS +    ++L     M   G+  + YT
Sbjct: 60  MYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYT 119

Query: 201 FSCVLKCLAVVGNSRRV-----------------------------KDAHKLFDELSDRD 231
           +S VL+    + N R++                              DA  +F+E+   D
Sbjct: 120 YSSVLRACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGD 179

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           +V WN +I G+  N   ++ L ++K M    F  D +T+ +VL  C     L  GR VH 
Sbjct: 180 LVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHV 239

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK-MGERSVVSWTSMIAGYAREGVFD 350
             LK  + +++  NN LLDMY KCG L+ A  +F + M E+ V+SW++MIAG A+ G   
Sbjct: 240 HVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSA 297

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN---DMQSSLYVSN 407
            A++LF  M  +G +P+   I  +L AC+  GL+  G      +KE+   D     Y   
Sbjct: 298 DALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHY--G 355

Query: 408 ALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            ++D+  + G + +A  + ++M  + D V+W  ++GA
Sbjct: 356 CIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGA 392



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 150/296 (50%), Gaps = 19/296 (6%)

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
           ++    M R  +  D    + ++  C   G ++  + VH+++  N  +   ++ N L++M
Sbjct: 1   MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTM 461
           Y K G + +A ++F++MP +++VSW TMI           ALD  + ML +   P+  T 
Sbjct: 61  YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
           + +L AC  L  L   R++HG IL+ G+ +D  V +A++D Y K G    A ++F+ +  
Sbjct: 121 SSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMIT 177

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
            DL+ W  +I G+  +  G + +  +  M++A    D+ +  SVL AC+   L++ G + 
Sbjct: 178 GDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQV 237

Query: 582 -FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
             ++++Y+ ++         ++D+  + G+L +A      M    D   W +++ G
Sbjct: 238 HVHVLKYDQDLILN----NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAG 289



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 155/332 (46%), Gaps = 54/332 (16%)

Query: 85  VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT 144
           +L   E  + +  TY S+L+ C  L +L   +++H  I + G+   D  + S L+  +  
Sbjct: 106 ILMLREGVRPNMYTYSSVLRACDGLLNL---RQLHGSILKVGLE-SDVFVRSALIDTYSK 161

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
            G+  +   VFN++  G + +WN ++  +++  +  E+L+L+K+M+     AD  T + V
Sbjct: 162 LGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSV 221

Query: 205 LKC---LAVVGNSRRV---------------------------KDAHKLFDE-LSDRDVV 233
           L+    LA++   R+V                           +DA+ LF   ++++DV+
Sbjct: 222 LRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVI 281

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           SW+ MI+G   NG +   L++F+ M + G   +  T++ VL  C++ G +  G   +  +
Sbjct: 282 SWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDG-WYYFQS 340

Query: 294 LKACFSKEISFNNT--LLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFD 350
           +K  F  +    +   ++D+  + G LD A+++  +M  E   V+W  ++          
Sbjct: 341 MKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILL---------- 390

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDG 382
           GA R     V + ++  +YA   IL     D 
Sbjct: 391 GACR-----VHKNVDLAIYAAKEILKLDPADA 417


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 254/687 (36%), Positives = 391/687 (56%), Gaps = 44/687 (6%)

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +M   G+   +Y  S +++   +  +   +  A  +F+ + + +++ WN M  G+  +  
Sbjct: 24  QMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSD 83

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
               L ++  M++LG   +  T   +L  CA   A   G+ +H   LK  +  ++  + +
Sbjct: 84  PVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTS 143

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG-------VFDG--------- 351
           L+ MY + G L+ A +VF++   R VVS+T++I GYA +G       +FD          
Sbjct: 144 LISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSW 203

Query: 352 ---------------AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
                          A+ LF+ M++  + PD   + S++ ACA    +E+G+ VH +I +
Sbjct: 204 NAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDD 263

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           +   S+L + NAL+D+Y KCG +  A  +F  +  KD++SWNT+IG          AL L
Sbjct: 264 HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLL 323

Query: 447 FVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRH--GISADRNVANAIVDMY 503
           F  ML++ E P+ VTM  ILPACA L A+E GR IH YI +   G++   +   +++DMY
Sbjct: 324 FQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMY 383

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +  A+ +FD I  + L SW  MI G+ MHG    A   F+ MR+  IEPD+++F+
Sbjct: 384 AKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFV 443

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L ACSHSG++D G   F  M+ +  I PKLEHY CM+DLL  +G   EA   I  M +
Sbjct: 444 GLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM 503

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            PD  IW SLL  C+++  V+L E  A+++ ++EP N G YVLL+N+YA A +W EV K+
Sbjct: 504 EPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKI 563

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R  ++ +G+KK PGCS IEI   V+ F+ G   HP  ++I  +L+ + + ++  G+ P T
Sbjct: 564 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 623

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              L   +E  KE AL  HSEKLA+AFG+++   G  + + KNLRVC +CHE  K +SK 
Sbjct: 624 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 683

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +REI+ RD  RFHHF+DG CSC  +W
Sbjct: 684 YKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 204/396 (51%), Gaps = 52/396 (13%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+  +L+ CA  K+  +G+++H  + + G  +D  V  S L+ M+V  G L++ R+VF++
Sbjct: 105 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTS-LISMYVQNGRLEDARKVFDQ 163

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
             +  V  +  L+  Y+  G                                       +
Sbjct: 164 SSHRDVVSYTALITGYASKG--------------------------------------YI 185

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
             A K+FDE+  +DVVSWN MISGY   G  ++ LE+FKEM+      D +TMV+V+S C
Sbjct: 186 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 245

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A   ++  GR VH++     F   +   N L+D+Y KCG+++ A  +FE +  + V+SW 
Sbjct: 246 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWN 305

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE- 396
           ++I GY    ++  A+ LF+ M+R G  P+   + SIL ACA  G +EIG+ +H YI + 
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR 365

Query: 397 -NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALD 445
              + ++     +L+DMYAKCG +  A+ VF+ +  + + SWN MI           A D
Sbjct: 366 LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFD 425

Query: 446 LFVAMLQN-FEPDGVTMACILPACASLAALERGREI 480
           +F  M +N  EPD +T   +L AC+    L+ GR I
Sbjct: 426 IFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 461



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 212/443 (47%), Gaps = 49/443 (11%)

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG---AIRVFEKMGE 330
           LS   NC  L   R +HA  +K          + L++        DG   AI VFE + E
Sbjct: 6   LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
            +++ W +M  G+A       A+ L+  M+  G+ P+ Y    +L +CA       G+ +
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ---------------------- 428
           H ++ +      LYV  +L+ MY + G + DA  VF+Q                      
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYI 185

Query: 429 ---------MPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPAC 468
                    +P+KD+VSWN MI           AL+LF  M++ N  PD  TM  ++ AC
Sbjct: 186 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 245

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A  A++E GR++H +I  HG  ++  + NA++D+Y+KCG +  A  LF+ +  KD+ISW 
Sbjct: 246 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWN 305

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG-WRFFNMMRY 587
            +I GY       +A+  F +M ++G  P++V+ +S+L AC+H G ++ G W    + + 
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR 365

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
              +     H   ++D+ ++ G++  A +  + + +    + W +++ G  +H     A 
Sbjct: 366 LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAMHGRANAAF 424

Query: 648 KVAEHVF--ELEPDNTGYYVLLA 668
            +   +   E+EPD+  +  LL+
Sbjct: 425 DIFSRMRKNEIEPDDITFVGLLS 447



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 37/261 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + E GN ++A+E+     K+ +  D  T  S++  CA   S+E G++VHS I
Sbjct: 202 SWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWI 261

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   +  ++ + L+ +++ CG+++    +F  +    V  WN L+  Y+    +KE+
Sbjct: 262 DDHGFGSNLKIVNA-LIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG----------------------NSRR---- 216
           L LF++M   G + +  T   +L   A +G                      +S R    
Sbjct: 321 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLI 380

Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   ++ A ++FD + +R + SWN MI G+  +G A    ++F  M       D  
Sbjct: 381 DMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDI 440

Query: 269 TMVTVLSGCANCGALMFGRAV 289
           T V +LS C++ G L  GR +
Sbjct: 441 TFVGLLSACSHSGMLDLGRHI 461


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 278/807 (34%), Positives = 419/807 (51%), Gaps = 80/807 (9%)

Query: 104 QLCADLKSLEDGKKVHSIICESGIVIDDGVLG-SKLVFMFVTCGDLKE---GRRVFNKID 159
           +L  + K+L++ K++H  + + G++        +KL+   V  G L+     R  F   D
Sbjct: 30  KLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGDDD 89

Query: 160 N--GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL----KCLAV--- 210
                +F++N L+  Y+  G   +++ L+ +M  +GI  D YTF  +L    K LA+   
Sbjct: 90  GNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEG 149

Query: 211 -----------------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                            V NS         +V    KLFD + +R+VVSW  +I+GY   
Sbjct: 150 VQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGR 209

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
            ++++ + +F +M   G   +  TMV V+S CA    L  G+ V ++  +          
Sbjct: 210 DLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMV 269

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N L+DMY KCGD+  A ++F++   +++V + ++++ Y         + +   M+++G  
Sbjct: 270 NALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPR 329

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           PD   + S + ACA  G L +GK  H Y+  N ++    +SNA++DMY KCG    A  V
Sbjct: 330 PDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKV 389

Query: 426 FNQMPVK-------------------------------DIVSWNTMIGAL---------- 444
           F  MP K                               D+VSWNTMIGAL          
Sbjct: 390 FEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAI 449

Query: 445 DLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           +LF  M  Q    D VTM  I  AC  L AL+  + +  YI ++ I  D  +  A+VDM+
Sbjct: 450 ELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMF 509

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            +CG    A  +F  +  +D+ +WT  I    M G    AI  FN+M +  ++PD+V F+
Sbjct: 510 SRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFV 569

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           ++L ACSH G VD+G + F  M     I P + HY CMVDLL R G L EA   I+ MP+
Sbjct: 570 ALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPI 629

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            P+  +WGSLL  CR H  V+LA   AE + +L P+  G +VLL+N+YA A KW +V ++
Sbjct: 630 EPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARV 689

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R ++  +G++K PG S IE++G ++ F +G  SH     I  +L+ +   +   GY P T
Sbjct: 690 RLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDT 749

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              L++ DE EKE  L  HSEKLAMA+G++    G  IRV KNLR+C DCH  AK +SK 
Sbjct: 750 TNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKL 809

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             REI +RD+NR+H FK+G CSCR +W
Sbjct: 810 YNREITVRDNNRYHFFKEGFCSCRDYW 836



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 165/351 (47%), Gaps = 41/351 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T  S +  CA L  L  GK  H+ +  +G+   D +  + ++ M++ CG  +   +V
Sbjct: 331 DKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNI-SNAIIDMYMKCGKREAACKV 389

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F  + N  V  WN L+    + G+ + +  +F                            
Sbjct: 390 FEHMPNKTVVTWNSLIAGLVRDGDMELAWRIF---------------------------- 421

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                     DE+ +RD+VSWN MI   +   + E+ +E+F+EM N G   D  TMV + 
Sbjct: 422 ----------DEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIA 471

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S C   GAL   + V  +  K     ++     L+DM+S+CGD   A+ VF++M +R V 
Sbjct: 472 SACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVS 531

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH-DY 393
           +WT+ I   A EG  +GAI LF  M+ + ++PD     ++L AC+  G ++ G+ +    
Sbjct: 532 AWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSM 591

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            K + ++  +     ++D+  + G + +A  +   MP++ + V W +++ A
Sbjct: 592 EKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAA 642


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/700 (38%), Positives = 398/700 (56%), Gaps = 40/700 (5%)

Query: 146 GDLKEGRRVFNK--IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
           GD+   R+VF+   +    +  WN ++  Y ++   +++L LF +M      + +   S 
Sbjct: 33  GDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISG 92

Query: 204 VLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
            +K       +  V DA K+FD + +R+VVSW  M+ GY+  G+ E+  ++F EM     
Sbjct: 93  YVK-------NGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRN- 144

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFAL-KACFSKEISFNNTLLDMYSKCGDLDGAI 322
                   TV+ G    G L   R   A  L      K++     ++  Y + G LD A 
Sbjct: 145 ----VVSWTVMIG----GLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEAR 196

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
            +F++M  R+V +WT+M++GYA+ G  D A +LF  M     E +  + T++L      G
Sbjct: 197 ELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMP----ERNEVSWTAMLMGYTQSG 252

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
            ++   ++ + +        +   N ++  +   G M  A  +F  M  +D  +WN MI 
Sbjct: 253 RMKEAFELFEAMP----VKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIK 308

Query: 443 -----ALDL-FVAMLQNFEPDGV-----TMACILPACASLAALERGREIHGYILRHGISA 491
                 LDL  + +    + +GV     +M  +L  CASLA+L+ GR++H  ++R     
Sbjct: 309 VFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQ 368

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D  VA+ ++ MYVKCG LV A+ +F+    KD++ W  MI GY  HG G +A+  F+DM 
Sbjct: 369 DLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMC 428

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
            +G++PDEV+FI VL ACS+SG V EG+  F  M+    +EP +EHYACMVDLL R G +
Sbjct: 429 SSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRV 488

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
            EA   +E MP+ PDA +WG+LL  CR H ++ LAE   E + +LEP N G YVLL+++Y
Sbjct: 489 DEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMY 548

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS-SHPHAKKIESLLKRL 730
           A   +W +V+ LR+KI+RR + K PGCSWIE++ KV++F  G S SHP    I  +L++L
Sbjct: 549 ATKGRWRDVEVLRKKINRRVI-KFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKL 607

Query: 731 RLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVC 790
              ++  GY P   + L + DE EK  +L  HSE+LA+A+G+L +P G  IRV KNLRVC
Sbjct: 608 SGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVC 667

Query: 791 GDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           GDCH   K ++K   REI+LRD+NRFHHFKDG CSC+ FW
Sbjct: 668 GDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 204/427 (47%), Gaps = 42/427 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           ++ + +  + + G +E+A ++ +  E  + +  ++  ++        ++D KK+  +I E
Sbjct: 116 SWTSMVRGYVQEGMVEEAEKLFW--EMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPE 173

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
             +V+   ++G      +   G L E R +F+++    VF W  ++  Y+K G    +  
Sbjct: 174 KDVVVVTNMIGG-----YCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARK 228

Query: 185 LFKKMQ-----SLGIAADSYTFSCVLK----------------CLAVV---GNSRRVKDA 220
           LF+ M      S       YT S  +K                C  ++   G +  +  A
Sbjct: 229 LFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRA 288

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
             +F+ + +RD  +WN MI  +   G+  + L +F  M   G  ++  +M++VLS CA+ 
Sbjct: 289 RMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASL 348

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
            +L  GR VHA  +++ F +++   + L+ MY KCGDL  A  +F +   + VV W SMI
Sbjct: 349 ASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMI 408

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDM 399
            GY++ G+ + A+ +F  M   G++PD      +L AC+  G ++ G ++ + +K    +
Sbjct: 409 TGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQV 468

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA------LDL---FVA 449
           +  +     ++D+  + G + +A  +  +MP++ D + W  ++GA      LDL    V 
Sbjct: 469 EPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVE 528

Query: 450 MLQNFEP 456
            L   EP
Sbjct: 529 KLAKLEP 535



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 130/289 (44%), Gaps = 42/289 (14%)

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEK--MGERSVVSWTSMIAGYAREGVFDGAIRLF 356
           ++ +  N + +  Y + GD+  A +VF+   + +R++ SW +M++ Y        A+ LF
Sbjct: 16  ARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLF 75

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M +     +  +   ++     +G++   + V D + E ++ S      +++  Y + 
Sbjct: 76  DQMPQR----NTVSFNGMISGYVKNGMVADARKVFDVMPERNVVS----WTSMVRGYVQE 127

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALER 476
           G + +AE +F +MP +++VSW  MIG L     + ++   D   +  ++P          
Sbjct: 128 GMVEEAEKLFWEMPRRNVVSWTVMIGGL-----LKESRIDDAKKLFDMIP---------- 172

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
                          D  V   ++  Y + G L  AR LFD +  +++ +WT M++GY  
Sbjct: 173 -------------EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAK 219

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           +G    A   F  M     E +EVS+ ++L   + SG + E +  F  M
Sbjct: 220 NGRVDVARKLFEVMP----ERNEVSWTAMLMGYTQSGRMKEAFELFEAM 264


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 254/683 (37%), Positives = 385/683 (56%), Gaps = 44/683 (6%)

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           KM   G+   +Y  S +++   +  +   +  A  +FD + + +++ WN M  G+  +  
Sbjct: 24  KMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHALSSD 83

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
               L ++  M++LG   +  T   +L  CA   A   G+ +H   LK     ++  + +
Sbjct: 84  PVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTS 143

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVS-------------------------------W 336
           L+ MY K G  + A +VF++   R VVS                               W
Sbjct: 144 LIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSW 203

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++I+GYA  G +  A+ LF+ M++  ++PD   + ++L ACA    +E+G+ VH +I +
Sbjct: 204 NALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDD 263

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           +   S+L + NAL+D+Y KCG +  A  +F  +  KD++SWNT+IG          AL L
Sbjct: 264 HGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLL 323

Query: 447 FVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRH--GISADRNVANAIVDMY 503
           F  ML++ E P+ VTM  ILPACA L A++ GR IH YI +   G+S   ++  +++DMY
Sbjct: 324 FQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMY 383

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +  A+ +FD +  + L SW  MI G+ MHG    A   F+ MR+ GIEPD+++F+
Sbjct: 384 AKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFV 443

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L ACSHSG++D G   F  M  +  I PKLEHY CM+DLL  +G   EA   I  M +
Sbjct: 444 GLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEM 503

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            PD  IW SLL  C++H  V+L E  A+++ ++EP N+G YVLL+N+YA A +W EV K 
Sbjct: 504 DPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKR 563

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R  ++ +G+KK PGCS IEI   V+ F+ G   HP  ++I  +L+ + + ++  G+ P T
Sbjct: 564 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDT 623

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              L   +E  KE AL  HSEKLA+AFG+++   G  + + KNLRVC +CHE  K +SK 
Sbjct: 624 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 683

Query: 804 ARREIVLRDSNRFHHFKDGRCSC 826
            +REI+ RD  RFHHF DG CSC
Sbjct: 684 YKREIIARDRTRFHHFXDGVCSC 706



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 204/449 (45%), Gaps = 90/449 (20%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T+  +L+ CA  K+  +G+++H  + + G  +D  V  S L+ M+V  G  ++ R+V
Sbjct: 102 NSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTS-LIAMYVKNGRXEDARKV 160

Query: 155 FNK----------------IDNG---------------KVFIWNLLMHEYSKTGNFKESL 183
           F++                  NG                V  WN L+  Y++TGN+KE+L
Sbjct: 161 FDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEAL 220

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR---------------------------- 215
            LFK+M    +  D  T   VL   A   +                              
Sbjct: 221 ELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLY 280

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                V+ A  LF+ LS +DV+SWN +I GY    + ++ L +F+EML  G + +  TM+
Sbjct: 281 IKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTML 340

Query: 272 TVLSGCANCGALMFGRAVHAFALKAC--FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           ++L  CA+ GA+  GR +H +  K     S   S   +L+DMY+KCGD++ A +VF+ M 
Sbjct: 341 SILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSML 400

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            RS+ SW +MI G+A  G  + A  +F  M ++GIEPD      +L AC+  G+L++G+ 
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRH 460

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFV 448
           +   + E+  +   L     ++D+    G   +AE + N M                   
Sbjct: 461 IFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSM------------------- 501

Query: 449 AMLQNFEPDGVTMACILPACASLAALERG 477
                 +PDGV    +L AC     +E G
Sbjct: 502 ----EMDPDGVIWCSLLKACKMHGNVELG 526



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 173/410 (42%), Gaps = 76/410 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + E GN ++A+E+     K+ +  D  T  ++L  CA   S+E G++VHS I
Sbjct: 202 SWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWI 261

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   +  ++ + L+ +++ CG+++    +F  +    V  WN L+  Y+    +KE+
Sbjct: 262 DDHGFGSNLKIVNA-LIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----------SRRVKD------------ 219
           L LF++M   G + +  T   +L   A +G             +R+K             
Sbjct: 321 LLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLI 380

Query: 220 -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      A ++FD + +R + SWN MI G+  +G A    ++F  M   G   D  
Sbjct: 381 DMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDI 440

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V +LS C++ G L  GR  H F              ++ + Y     L+         
Sbjct: 441 TFVGLLSACSHSGMLDLGR--HIF-------------RSMTEDYKITPKLE--------- 476

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                  +  MI      G+F  A  +   M    ++PD     S+L AC   G +E+G+
Sbjct: 477 ------HYGCMIDLLGHSGLFKEAEEMINSM---EMDPDGVIWCSLLKACKMHGNVELGE 527

Query: 389 D-VHDYIKENDMQSSLYVSNALMDMYAKCG---SMADAESVFNQMPVKDI 434
               + IK     S  YV   L ++YA  G    +A   ++ N   +K +
Sbjct: 528 SFAQNLIKIEPKNSGSYV--LLSNIYATAGRWNEVAKRRALLNDKGMKKV 575


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/706 (34%), Positives = 381/706 (53%), Gaps = 81/706 (11%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K +A   N     DA  +   + D  V S++ +I       +  + + VF  M + G   
Sbjct: 55  KLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIP 114

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D   +  +   CA   A   G+ +H  A  +    +     +L  MY +CG +  A +VF
Sbjct: 115 DTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVF 174

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA--------------- 370
           ++M E+ VV+ ++++ GYAR+G  +  +R+   M + GIEP++ +               
Sbjct: 175 DRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHK 234

Query: 371 --------------------ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
                               ++S+L +      L +G+ +H Y+ +  +     V +A++
Sbjct: 235 EAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAML 294

Query: 411 DMYAKCGSMADAESVFNQMPVKD-----------------------------------IV 435
           DMY K G +     +F++  + +                                   +V
Sbjct: 295 DMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVV 354

Query: 436 SWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYI 484
           SW ++I           AL+LF  M +   +P+ VT+  +LPAC ++AAL  GR  HG+ 
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFA 414

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
           +R  +  D +V +A++DMY KCG + +++ +F+M+P K+L+ W  ++ GY MHG   + +
Sbjct: 415 VRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVM 474

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
           + F  + +  ++PD +SF S+L AC   GL DEGW++FNMM  E  I+P+LEHY+CMV+L
Sbjct: 475 SIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNL 534

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
           L R G L EAY  I+ +P  PD+ +WG+LL  CR+ + V LAE  A+ +F LEP+N G Y
Sbjct: 535 LGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTY 594

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
           VL++N+YA    W EV  +R K+   GLKKNPGCSWI++K KV   +A   SHP   +I 
Sbjct: 595 VLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQIT 654

Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVT 784
             +  +  EM++ G+ P   +AL + +E E+E  L GHSEKLA+ FG+LN P G  ++V 
Sbjct: 655 EKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVI 714

Query: 785 KNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KNLR+CGDCH + KF+S  A REI +RD+NRFHHFKDG CSC  FW
Sbjct: 715 KNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 223/473 (47%), Gaps = 82/473 (17%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           DT    ++ ++CA+L + + GK++H + C SG+ +D  V GS L  M++ CG + + R+V
Sbjct: 115 DTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGS-LFHMYMRCGRMGDARKV 173

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+++    V   + L+  Y++ G  +E + +  +M+  GI                    
Sbjct: 174 FDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGI-------------------- 213

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                         + ++VSWN ++SG+  +G  ++ + +F++M +LGF  D  T+ +VL
Sbjct: 214 --------------EPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVL 259

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF--------- 325
               +   L  GR +H + +K    K+    + +LDMY K G + G I++F         
Sbjct: 260 PSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETG 319

Query: 326 --------------------------EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                                     E+  E +VVSWTS+IAG A+ G    A+ LFR M
Sbjct: 320 VCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREM 379

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
              G++P+   I S+L AC     L  G+  H +     +   ++V +AL+DMYAKCG +
Sbjct: 380 QVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRI 439

Query: 420 ADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPAC 468
             ++ VFN MP K++V WN+++            + +F ++++   +PD ++   +L AC
Sbjct: 440 KMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC 499

Query: 469 ASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
             +   + G +    +   +GI       + +V++  + G L  A  L   IP
Sbjct: 500 GQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIP 552



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 201/483 (41%), Gaps = 88/483 (18%)

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           HA  LK+    +   +  L+  YS     + A  + + + + +V S++S+I    +  +F
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             +I +F  M   G+ PD + + ++   CA     + GK +H     + +    +V  +L
Sbjct: 98  SQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSL 157

Query: 410 MDMYAKCGSMADAESVFNQMPVKD-----------------------------------I 434
             MY +CG M DA  VF++M  KD                                   I
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNI 217

Query: 435 VSWNTMIGALDL------FVAMLQN-----FEPDGVTMACILPACASLAALERGREIHGY 483
           VSWN ++   +        V M Q      F PD VT++ +LP+      L  GR+IHGY
Sbjct: 218 VSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGY 277

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD-------------------- 523
           +++ G+  D+ V +A++DMY K G +     LFD     +                    
Sbjct: 278 VIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKA 337

Query: 524 ---------------LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
                          ++SWT +IAG   +G   +A+  F +M+ AG++P+ V+  S+L A
Sbjct: 338 LEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPA 397

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           C +   +  G R  +      ++   +   + ++D+ ++ G +  +     MMP   +  
Sbjct: 398 CGNIAALGHG-RSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTK-NLV 455

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVF--ELEPDNTGYYVLLA---NVYAEAEKWEEVKKL 683
            W SL+ G  +H + K    + E +    L+PD   +  LL+    V    E W+    +
Sbjct: 456 CWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMM 515

Query: 684 REK 686
            E+
Sbjct: 516 SEE 518



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 16/215 (7%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           A+ G+  E   L + M+V       K +  T  S+L  C ++ +L  G+  H       +
Sbjct: 364 AQNGKDIEALELFREMQV----AGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
            +DD  +GS L+ M+  CG +K  + VFN +    +  WN LM+ YS  G  KE + +F+
Sbjct: 420 -LDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFE 478

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGY 242
            +    +  D  +F+ +L     VG      +  K F+ +S+   +      ++CM++  
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVG---LTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLL 535

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
              G  ++  ++ KE   + F  D      +L+ C
Sbjct: 536 GRAGKLQEAYDLIKE---IPFEPDSCVWGALLNSC 567


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/651 (37%), Positives = 375/651 (57%), Gaps = 20/651 (3%)

Query: 193 GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL 252
           G AAD++  S + K    +    R  DA K+FD +   D + WN +++G   +    + L
Sbjct: 144 GYAADTFVASALAKLYFKLS---RGDDARKVFDTVPSPDTILWNTLLAGLPGS----EAL 196

Query: 253 EVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           E F  M++ G    D  T+ + L   A    +  GR VH + +K   ++       L+ +
Sbjct: 197 EAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSL 256

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           YSKCGD+D A  +F++M    +V++ ++I+GY+  G+ + ++ LF+ +   G  P+   +
Sbjct: 257 YSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTL 316

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            +++   +  G   + + +H ++ +  + +   VS AL  +Y +   M  A S+F+ M  
Sbjct: 317 VAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLE 376

Query: 432 KDIVSWNTMI------GALDLFVAMLQ-----NFEPDGVTMACILPACASLAALERGREI 480
           K + SWN MI      G  ++ VA+ Q     N +P+ +T++  L ACA L AL  G+ +
Sbjct: 377 KTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWV 436

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           H  I +  +  +  V  A++DMY KCG +  ARS+FD +  K+++SW  MI+GYG+HG G
Sbjct: 437 HRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQG 496

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
            +A+  + DM  A I P   +F+SV+YACSH GLVDEG + F +M  E  I P +EH  C
Sbjct: 497 AEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTC 556

Query: 601 MVDLLSRTGNLSEAYRFIEMMP-VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           MVDLL R G L+EA   I   P  A    +WG+LL  C +H    LA+  ++ +FEL+ +
Sbjct: 557 MVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSE 616

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           N GYYVLL+N+Y   + + E   +R++   R L K PGC+ IEI  + ++F+AG   HP 
Sbjct: 617 NAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQ 676

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
           ++ I S L+RL  +M   GY P T  AL + +E EKE  +  HSEKLA+AFG+L+   G 
Sbjct: 677 SEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGT 736

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            IR+ KNLRVC DCH   KF+SK  +R IV+RD++RFHHF+DG CSC  +W
Sbjct: 737 EIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 221/451 (49%), Gaps = 50/451 (11%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
            + +H +   +G   D  V  S L  ++       + R+VF+ + +    +WN L+    
Sbjct: 133 ARTLHGLSVAAGYAADTFV-ASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLP 191

Query: 175 KTGNFKESLYLFKKMQSLG-IAADSYTFS----------------CV----LKC------ 207
            +    E+L  F +M   G +  DS T +                CV    +KC      
Sbjct: 192 GS----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHE 247

Query: 208 ------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                 +++      +  A  LFD + + D+V++N +ISGY  NG+ E  +E+FKE+   
Sbjct: 248 HVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTAS 307

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G+  + +T+V V+   +  G  +  R +HAF +KA    +   +  L  +Y +  D++ A
Sbjct: 308 GWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESA 367

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F+ M E+++ SW +MI+GYA+ G+ + A+ LF+ M    ++P+   I+S L ACA  
Sbjct: 368 RSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHL 427

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
           G L +GK VH  I +  ++ ++YV  AL+DMYAKCGS+A+A S+F++M  K++VSWN MI
Sbjct: 428 GALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMI 487

Query: 442 G----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYIL-RHGI 489
                      AL L+  ML     P   T   ++ AC+    ++ G+++   +   + I
Sbjct: 488 SGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRI 547

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           +        +VD+  + G L  A  L    P
Sbjct: 548 TPGIEHCTCMVDLLGRAGKLNEALELISEFP 578



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 191/388 (49%), Gaps = 36/388 (9%)

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           + + D+ T  S L+  A+   +  G+ VH    + G+   + V+ + L+ ++  CGD+  
Sbjct: 207 RVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVV-TGLMSLYSKCGDMDS 265

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL----- 205
            + +F+++DN  +  +N L+  YS  G  + S+ LFK++ + G   +S T   V+     
Sbjct: 266 AQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSP 325

Query: 206 -------KCL-AVVGNSR----------------RVKD---AHKLFDELSDRDVVSWNCM 238
                  +CL A V  +R                R+ D   A  +FD + ++ + SWN M
Sbjct: 326 FGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAM 385

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           ISGY  NG+ E  + +F+ M  L    +  T+ + LS CA+ GAL  G+ VH    K   
Sbjct: 386 ISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKL 445

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
              +     L+DMY+KCG +  A  +F++M  ++VVSW +MI+GY   G    A++L++ 
Sbjct: 446 ELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKD 505

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCG 417
           M+   I P      S+++AC+  GL++ G+ V   +  E  +   +     ++D+  + G
Sbjct: 506 MLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAG 565

Query: 418 SMADAESVFNQMPVKDIVS--WNTMIGA 443
            + +A  + ++ P   I    W  ++GA
Sbjct: 566 KLNEALELISEFPQSAIGPGVWGALLGA 593



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 180/370 (48%), Gaps = 24/370 (6%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
            R +H  ++ A ++ +    + L  +Y K    D A +VF+ +     + W +++AG   
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192

Query: 346 EGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
               +  +R    MV  G + PD   + S L A A    + +G+ VH Y  +  +    +
Sbjct: 193 SEALEAFVR----MVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEH 248

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN- 453
           V   LM +Y+KCG M  A+ +F++M   D+V++N +I           +++LF  +  + 
Sbjct: 249 VVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASG 308

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
           + P+  T+  ++P  +        R +H ++++  + AD  V+ A+  +Y +   +  AR
Sbjct: 309 WRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESAR 368

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
           S+FD +  K + SW  MI+GY  +G    A+A F  M++  ++P+ ++  S L AC+H G
Sbjct: 369 SIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLG 428

Query: 574 LVDEG-W--RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
            +  G W  R  +  + E N+         ++D+ ++ G+++EA    + M    +   W
Sbjct: 429 ALSLGKWVHRIISKEKLELNVYV----MTALIDMYAKCGSIAEARSIFDRMD-NKNVVSW 483

Query: 631 GSLLCGCRIH 640
            +++ G  +H
Sbjct: 484 NAMISGYGLH 493



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 14/222 (6%)

Query: 46  CTINPISA--SISKTLVCKT-KNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYC 100
           C +N + +  SI   ++ KT +++NA I  + + G  E A+ +    ++  +     T  
Sbjct: 359 CRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITIS 418

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S L  CA L +L  GK VH II +  + ++  V+ + L+ M+  CG + E R +F+++DN
Sbjct: 419 STLSACAHLGALSLGKWVHRIISKEKLELNVYVM-TALIDMYAKCGSIAEARSIFDRMDN 477

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
             V  WN ++  Y   G   E+L L+K M    I   S TF   L  +    +   V + 
Sbjct: 478 KNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTF---LSVIYACSHGGLVDEG 534

Query: 221 HKLFDELSDRDVVSW-----NCMISGYIANGVAEKGLEVFKE 257
            K+F  +++   ++       CM+      G   + LE+  E
Sbjct: 535 QKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISE 576



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 14/227 (6%)

Query: 425 VFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERG------R 478
           +F   P  D    N ++ +L      L    PD  + A       S +   RG      R
Sbjct: 76  LFRAFPCPDRFLRNALLRSLPSLRPHLLFPSPDSFSFA-FAATSLSSSCSSRGNDAAAAR 134

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
            +HG  +  G +AD  VA+A+  +Y K      AR +FD +P+ D I W  ++AG     
Sbjct: 135 TLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLP--- 191

Query: 539 FGCDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
            G +A+  F  M  AG + PD  +  S L A + +  +  G R  +    +C +      
Sbjct: 192 -GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMG-RCVHGYGVKCGLAEHEHV 249

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVK 644
              ++ L S+ G++  A    + M   PD   + +L+ G  ++  V+
Sbjct: 250 VTGLMSLYSKCGDMDSAQFLFDRMD-NPDLVAYNALISGYSVNGMVE 295


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 239/623 (38%), Positives = 359/623 (57%), Gaps = 16/623 (2%)

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           KLFD++S R++VSW  +I+G+  N   ++ L  F +M   G       + +VL  C + G
Sbjct: 131 KLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLG 190

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
           A+ FG  VH   +K  F  E+   + L DMYSKCG+L  A + FE+M  +  V WTSMI 
Sbjct: 191 AIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMID 250

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           G+ + G F  A+  +  MV + +  D + + S L AC+       GK +H  I +   + 
Sbjct: 251 GFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEY 310

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQ--------- 452
             ++ NAL DMY+K G M  A +VF      D +S  ++   +D +V M Q         
Sbjct: 311 ETFIGNALTDMYSKSGDMVSASNVFQIHS--DCISIVSLTAIIDGYVEMDQIEKALSTFV 368

Query: 453 -----NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
                  EP+  T   ++ ACA+ A LE G ++HG +++     D  V++ +VDMY KCG
Sbjct: 369 DLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCG 428

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
           +   +  LFD I   D I+W  ++  +  HG G +AI TFN M   G++P+ V+F+++L 
Sbjct: 429 LFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLK 488

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
            CSH+G+V++G  +F+ M     + PK EHY+C++DLL R G L EA  FI  MP  P+ 
Sbjct: 489 GCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNV 548

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
             W S L  C+IH +++ A+  A+ + +LEP+N+G +VLL+N+YA+ ++WE+V+ LR+ I
Sbjct: 549 FGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMI 608

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
               + K PG SW++I+ K ++F     SHP  K+I   L  L  ++KR GY P+T   L
Sbjct: 609 KDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVL 668

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
           I+ D+  KE  L  HSE++A+AF +L  P G  I V KNLRVC DCH   KF+SK   R 
Sbjct: 669 IDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERN 728

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           I++RD +RFHHF +G CSC  +W
Sbjct: 729 IIVRDISRFHHFSNGSCSCGDYW 751



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 245/521 (47%), Gaps = 57/521 (10%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L+ S     DTKT   ++Q  A  K L  GK++H+++   G  + +  L +  + ++  C
Sbjct: 65  LFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGG-CLPNTFLSNHFLNLYSKC 123

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G+L    ++F+K+    +  W  ++  ++    F+E+L  F +M+  G  A  +  S VL
Sbjct: 124 GELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVL 183

Query: 206 K---------------CLAV---------VGNSR--------RVKDAHKLFDELSDRDVV 233
           +               CL V         VG++          + DA K F+E+  +D V
Sbjct: 184 QACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAV 243

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
            W  MI G++ NG  +K L  + +M+     +D   + + LS C+   A  FG+++HA  
Sbjct: 244 LWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATI 303

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE-RSVVSWTSMIAGYAREGVFDGA 352
           LK  F  E    N L DMYSK GD+  A  VF+   +  S+VS T++I GY      + A
Sbjct: 304 LKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKA 363

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
           +  F  + R GIEP+ +  TS++ ACA    LE G  +H  + + + +   +VS+ L+DM
Sbjct: 364 LSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDM 423

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTM 461
           Y KCG    +  +F+++   D ++WNT++G          A++ F  M+ +  +P+ VT 
Sbjct: 424 YGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTF 483

Query: 462 ACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
             +L  C+    +E G      + + +G+       + ++D+  + G L  A    + +P
Sbjct: 484 VNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMP 543

Query: 521 AK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
            + ++  W   +    +HG          DM +A    D++
Sbjct: 544 FEPNVFGWCSFLGACKIHG----------DMERAKFAADKL 574



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 209/408 (51%), Gaps = 18/408 (4%)

Query: 242 YIANGVAEK-GLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           ++  GV E       K +   G  + D  T+  ++   A    L  G+ +HA  ++    
Sbjct: 48  FVLEGVEEIISFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCL 107

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                +N  L++YSKCG+LD  I++F+KM +R++VSWTS+I G+A    F  A+  F  M
Sbjct: 108 PNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQM 167

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             EG     +A++S+L AC   G ++ G  VH  + +      L+V + L DMY+KCG +
Sbjct: 168 RIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGEL 227

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPAC 468
           +DA   F +MP KD V W +MI           AL  ++ M+  +   D   +   L AC
Sbjct: 228 SDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSAC 287

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM-IPAKDLISW 527
           ++L A   G+ +H  IL+ G   +  + NA+ DMY K G +V A ++F +      ++S 
Sbjct: 288 SALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSL 347

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMR 586
           T +I GY        A++TF D+R+ GIEP+E +F S++ AC++   ++ G +    +++
Sbjct: 348 TAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVK 407

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           +    +P +   + +VD+  + G    + +  + +   PD   W +L+
Sbjct: 408 FNFKRDPFVS--STLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLV 452


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 269/752 (35%), Positives = 424/752 (56%), Gaps = 49/752 (6%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA IG +   G    A+ +  +   E   +D  ++  +L+ C  L+ +  G ++H ++ 
Sbjct: 130 WNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTELHCMLV 189

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN-KIDNGKVFIWNLLMHEYSKTGNFKES 182
           + G     G + + LV M+     L   +R+F+   + G   +WN ++  YS +G   E+
Sbjct: 190 KLGFN-STGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLET 248

Query: 183 LYLFKKMQSLGIAADSYTF--------------------SCVLKC------------LAV 210
           L LF++MQ  G A++SYT                     + VLK             +A+
Sbjct: 249 LQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAM 308

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                ++ +A ++   +++ DVV+WN +I GY+ N + ++ L+ F +M+  G   D  ++
Sbjct: 309 YARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSL 368

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +V++       L+ G  +HA+ +K  +   +   NTL+DMYSKC       R F  M E
Sbjct: 369 TSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHE 428

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + ++SWT++IAGYA       A++LFR + ++ +E D   + SIL AC+    + I K++
Sbjct: 429 KDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEI 488

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H +I    +  ++ + N L+D+Y KC +M  A  VF  +  KD+VSW +MI         
Sbjct: 489 HCHILRKGLIDTV-IQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNE 547

Query: 443 --ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             A++LF  M +     D V + CIL A ASL+AL++GREIHGY+LR G   + ++A A+
Sbjct: 548 NEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAV 607

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY  CG L  A+++FD I  K L+ +T MI  YGMHG G  ++  FN MR   + PD 
Sbjct: 608 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDH 667

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           +SF+++LYACSH+GL+DEG RF  +M  E  +EP  EHY C+VD+L R   + EA+ F++
Sbjct: 668 ISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVK 727

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
           MM   P   +W +LL  CR H E ++ E  A+ + ELEP N G  VL++NV+AE  +W +
Sbjct: 728 MMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWND 787

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE-G 738
           V+K+R K+   G++K+PGCSWIE+ GKV+ F A   SHP  K+I   L  +  +++RE G
Sbjct: 788 VEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETKEIYEKLSEVTRKLERESG 847

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
           Y   T++ L N DE EK   L GHSE+LA+A+
Sbjct: 848 YLADTKFILHNVDEGEKVQMLHGHSERLAIAY 879


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/586 (42%), Positives = 354/586 (60%), Gaps = 18/586 (3%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           ML LG   D  T   ++  C+      FG  +H   +K  +  ++  +N+L+ MY KC  
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
            + + +VF++M +++ VSW+++I    ++        LFR M+ EG  P   AI   L+A
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAI---LNA 117

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
            AC    E   DV+  + EN +     V +A   M+A+CG +  A  +F+ +  KD+V+W
Sbjct: 118 MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177

Query: 438 NTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR 486
            T I A          L L   M LQ   PD +T+  ++ AC++LA+ +    +HG I+ 
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IIT 236

Query: 487 HGISADRNVA--NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
            G   ++ +A   A++D+YVKCG L  AR +FD +  +++I+W+ MI+GYGMHG+G +A+
Sbjct: 237 TGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREAL 296

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
             F+ M+ A ++PD ++F+S+L ACSHSGLV EGW  FN M  +  + P+ EHYACMVD+
Sbjct: 297 NLFDQMK-ASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDI 355

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
           L R G L EA  FIE MPV P+A +WG+LL  CRIH  V LAE VA  +F+L+P N G Y
Sbjct: 356 LGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRY 415

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
           V+L N+Y    K +E   +R  +  RG+KK  G S IEIK K+  FVAG  SHP    I 
Sbjct: 416 VILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIY 475

Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVT 784
           S L+RL   +++EGY P   + L + DE  KE  L  HSEKLA+ FG+LNL  G  IR+ 
Sbjct: 476 SELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIR 535

Query: 785 KNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KNLRVCGDCH   KF+SK   REIV+RD++RFHHFK+G CSCR +W
Sbjct: 536 KNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 171/386 (44%), Gaps = 44/386 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  I++ C+ L+  E G ++H  + + G       + + L+ M+  C   +  R+V
Sbjct: 9   DNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQ-SQVFISNSLITMYGKCDKYELSRQV 67

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL------ 208
           F+++ +     W+ ++    +    KE   LF++M S G           + C+      
Sbjct: 68  FDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMACVRSHEEA 127

Query: 209 -----AVVGNSR------------------RVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                 VV N                    RV+ A KLFD +  +D+V+W   I  Y+  
Sbjct: 128 DDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKA 187

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE-ISF 304
            +  + L + K+M+  G   D  T++ V+  C+   +      VH       F  + ++ 
Sbjct: 188 DMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAV 247

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
              L+D+Y KCG L  A +VF+ M ER++++W++MI+GY   G    A+ LF  M +  +
Sbjct: 248 ETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KASV 306

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN------ALMDMYAKCGS 418
           +PD     SIL AC+  GL+  G +       N M     V+        ++D+  + G 
Sbjct: 307 KPDHITFVSILSACSHSGLVAEGWECF-----NSMARDFGVTPRPEHYACMVDILGRAGK 361

Query: 419 MADAESVFNQMPVK-DIVSWNTMIGA 443
           + +A     +MPV+ +   W  ++GA
Sbjct: 362 LDEACDFIERMPVRPNAAVWGALLGA 387



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 177/394 (44%), Gaps = 48/394 (12%)

Query: 189 MQSLGIAADSYTFSCVLK---CL-----------------------------AVVGNSRR 216
           M  LGI  D++TF  ++K   CL                              + G   +
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
            + + ++FDE+ D++ VSW+ +I   + +   ++G  +F++ML+ G      +   +L+ 
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEG---SRPSRGAILNA 117

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
            A   +      V+   ++     + S  +    M+++CG ++ A ++F+ +  + +V+W
Sbjct: 118 MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            + I  Y +  +   A+ L + M+ +GI PD   +  ++ AC+     ++   VH  I  
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITT 237

Query: 397 NDMQSSLY-VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
               + L  V  AL+D+Y KCGS+  A  VF+ M  ++I++W+ MI           AL+
Sbjct: 238 GFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALN 297

Query: 446 LFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIVDMYV 504
           LF  M  + +PD +T   IL AC+    +  G E    + R  G++        +VD+  
Sbjct: 298 LFDQMKASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILG 357

Query: 505 KCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           + G L  A    + +P + +   W  ++    +H
Sbjct: 358 RAGKLDEACDFIERMPVRPNAAVWGALLGACRIH 391


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 272/805 (33%), Positives = 437/805 (54%), Gaps = 50/805 (6%)

Query: 75  EVGNLEKAMEVLYSSEKSKID--TKTYCSILQLC-ADLKSLEDGKKVHSIICESGIVIDD 131
           ++G+ E+A+ +  S +   +    + + ++L  C AD + LE+G+++H ++  + +  D 
Sbjct: 76  QIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDH 135

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
            V  + L+ M+  C  +++ R+VF+ I + +V  WN ++  Y++  + ++++ +F  M  
Sbjct: 136 YV-STTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLL 194

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVK-------------------------------DA 220
            G+ A+  TF  VL   + + +    K                               D 
Sbjct: 195 EGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDL 254

Query: 221 HKLFDELSDR--DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
            + F   S    +++    MI+ Y      ++ LE+FK ML  G  +D    + VL+ C+
Sbjct: 255 EQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACS 314

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
               L  GR +H F  +  F + ++  N L++MY KCG L+ A+ VF  M  R V+SW +
Sbjct: 315 GPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNT 374

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +IA + +      A+ L   M  +G++ D  +  + L  CA    L  G+ +H +I E+ 
Sbjct: 375 IIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESG 434

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-----------LDLF 447
           +++ + + NA++DMY  C S  DA  VF  M  +D VSWN MI A           L LF
Sbjct: 435 IKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLF 494

Query: 448 VAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M L  F PD ++    L ACA+ A+L  G+ +H  I   G+ ++  VANA+++MY K 
Sbjct: 495 QQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKS 554

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G LVLAR +F  +P  D+ISW  MI+ +  HG     +  F  M   G  P++V+F+SV+
Sbjct: 555 GSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVV 614

Query: 567 YACSHSGLVDEGWRFFNMMRYE-CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
            ACSH GLV +G + F  + ++   I P+ EHY CMVDL++R G L  A +FI   P+ P
Sbjct: 615 SACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKP 674

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
           D  I  ++L   ++H +V+ A K AEH+ EL PD +  YV+L+N+Y E  K +E  K+R 
Sbjct: 675 DRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRR 734

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +  + ++K P  S I +K +V+ F  G +++    +I   L+RL LEM + GY P T  
Sbjct: 735 LMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDTTL 794

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L +  + +K+  L  HSEKLA+AFG+++   G ++R+ KNLRVCGDCH   KF+SK   
Sbjct: 795 MLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISKITG 854

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REIV+RDS+RFHHF +G CSC  +W
Sbjct: 855 REIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 177/595 (29%), Positives = 289/595 (48%), Gaps = 63/595 (10%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDG-VLGSKLVFMFVTCGDLKEGRRVFNK 157
           Y  +L + AD +SL+ GK+VH+ IC+S +  D G  +G  LV M+V CG L + +  F++
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAM--DRGPFMGDLLVRMYVDCGSLIDAKACFDR 58

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------------ 205
           +       W  L+  + + G+ +++L+LF+ MQ  G+A  +  F  VL            
Sbjct: 59  MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEE 118

Query: 206 ---------------------KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
                                  L + G    V+DA K+FD +  + VV WN MI+ Y  
Sbjct: 119 GRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQ 178

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK---- 300
               E+ ++VF  ML  G   +  T + VL  C+    L   + V     K C  +    
Sbjct: 179 QDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLV-----KLCVEEREHD 233

Query: 301 ---EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
              + SF   L++ Y  CGDL+ A R F +     +++ T+MI  Y +   +D A+ LF+
Sbjct: 234 HLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILA-TAMITQYTQRERWDEALELFK 292

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M+ EG++ D  A  ++L+AC+    LE G+ +H +++E      +   NAL++MY KCG
Sbjct: 293 VMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCG 352

Query: 418 SMADAESVFNQMPVKDIVSWNTMIGALD-----------LFVAMLQNFEPDGVTMACILP 466
           S+ +A  VF  M  +D++SWNT+I A             L +  L   + D ++    LP
Sbjct: 353 SLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALP 412

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
            CA+  AL +GR IH +I+  GI AD  + NAI+DMY  C     A  +F  + A+D +S
Sbjct: 413 LCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVS 472

Query: 527 WTIMIAGYGMHG-FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           W  MI  Y        +A+  F  M+  G  PD +SF++ L AC+    + EG    + +
Sbjct: 473 WNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRI 532

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           R E  +E  +     ++++ +++G+L  A +    MP+ PD   W  ++     H
Sbjct: 533 R-ETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPL-PDVISWNGMISAFAQH 585



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 234/496 (47%), Gaps = 25/496 (5%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC- 277
           DA   FD +  +D ++W  +I  +   G +E+ L +F+ M   G        V VL  C 
Sbjct: 51  DAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACS 110

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A+   L  GR +H          +   + TLL MY KC  ++ A +VF+ +  + VV W 
Sbjct: 111 ADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWN 170

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI--K 395
           +MI  YA++   + AI++F  M+ EG++ +      +L AC+    LE+ K V   +  +
Sbjct: 171 AMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEER 230

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           E+D       + AL++ Y  CG +  A   F++  ++ I++   MI           AL+
Sbjct: 231 EHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILA-TAMITQYTQRERWDEALE 289

Query: 446 LF-VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           LF V +L+  + D +    +L AC+    LE GR IHG++         N  NA+++MY 
Sbjct: 290 LFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYG 349

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG L  A  +F  +  +D+ISW  +IA +G H    +A+   + M+  G++ D++SF++
Sbjct: 350 KCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVN 409

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
            L  C+ S  + +G R  +    E  I+  +     ++D+     +  +A R    M  A
Sbjct: 410 ALPLCAASEALAKG-RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMK-A 467

Query: 625 PDATIWGSLLCG----CRIHHE-VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            D   W +++       R+  E + L +++  H F   PD    +V   +  A      E
Sbjct: 468 RDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGF--MPDVIS-FVAALSACAAQASLAE 524

Query: 680 VKKLREKISRRGLKKN 695
            K L ++I   GL+ N
Sbjct: 525 GKLLHDRIRETGLESN 540



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 179/384 (46%), Gaps = 17/384 (4%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L   A+  +L  G+ VHA   K+   +     + L+ MY  CG L  A   F++M  + 
Sbjct: 4   LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG-LLEIGKDVH 391
            ++W  +I  + + G  + A+ LFR M  EG+ P      ++L AC+ D  LLE G+ +H
Sbjct: 64  ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---------- 441
             ++   M+S  YVS  L+ MY KC S+ DA  VF+ +  K +V WN MI          
Sbjct: 124 GVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHE 183

Query: 442 GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYI--LRHGISADRNVANA 498
            A+ +F AM L+  + + +T   +L AC+ L  LE  + +   +    H    D + A A
Sbjct: 184 QAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATA 243

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +V+ Y  CG L  A   F      +LI  T MI  Y       +A+  F  M   G++ D
Sbjct: 244 LVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLD 302

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            ++ ++VL ACS    ++EG      MR E   +  +     ++++  + G+L EA    
Sbjct: 303 RIACMAVLNACSGPRGLEEGRMIHGFMR-EIRFDRHVNAGNALINMYGKCGSLEEAVEVF 361

Query: 619 EMMPVAPDATIWGSLLCGCRIHHE 642
             M    D   W +++     H +
Sbjct: 362 RSMQ-HRDVISWNTIIAAHGQHSQ 384


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 265/704 (37%), Positives = 395/704 (56%), Gaps = 39/704 (5%)

Query: 142 FVTCGDLKEGRRVFNK--IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSY 199
           +   G L   R+VF++  + +  V  WN ++  Y +    +E+L LF+KM      + + 
Sbjct: 32  YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNG 91

Query: 200 TFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
             S  +K       +  + +A ++FD + DR+VVSW  M+ GY+ NG   +   +F  M 
Sbjct: 92  LISGHIK-------NGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMP 144

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL-KACFSKEISFNNTLLDMYSKCGDL 318
           +           TV+ G    G L  GR   A  L      K++     ++  Y + G L
Sbjct: 145 HKN-----VVSWTVMLG----GLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRL 195

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
           D A  +F++M +R+VV+WT+M++GYAR G  D A +LF  M     E +  + T++L   
Sbjct: 196 DEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMP----ERNEVSWTAMLLGY 251

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
              G +     + D +        + V N ++  +   G +  A  VF  M  +D  +W+
Sbjct: 252 THSGRMREASSLFDAMP----VKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWS 307

Query: 439 TMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRH 487
            MI           AL LF  M  +    +  ++  +L  C SLA+L+ G+++H  ++R 
Sbjct: 308 AMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRS 367

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
               D  VA+ ++ MYVKCG LV A+ +F+  P KD++ W  MI GY  HG G +A+  F
Sbjct: 368 EFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVF 427

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
           +DM  +G+ PD+V+FI VL ACS+SG V EG   F  M+ +  +EP +EHYAC+VDLL R
Sbjct: 428 HDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGR 487

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
              ++EA + +E MP+ PDA +WG+LL  CR H ++ LAE   E + +LEP N G YVLL
Sbjct: 488 ADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLL 547

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS-SHPHAKKIESL 726
           +N+YA   +W +V+ LREKI  R + K PGCSWIE++ KV++F  G S  HP    I  +
Sbjct: 548 SNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKM 607

Query: 727 LKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKN 786
           L++L   ++  GY P   + L + DE EK  +L  HSEKLA+A+G+L +P G  IRV KN
Sbjct: 608 LEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKN 667

Query: 787 LRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LRVCGDCH   K ++K   REI+LRD+NRFHHFKDG CSC+ +W
Sbjct: 668 LRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 196/419 (46%), Gaps = 36/419 (8%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           + +V  +V  GD+ E  R+F  + +  V  W +++    + G   ++  LF  M    + 
Sbjct: 121 TSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVV 180

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG---VAEKGL 252
           A       V   +       R+ +A  LFDE+  R+VV+W  M+SGY  NG   VA K  
Sbjct: 181 A-------VTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLF 233

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL-KACFSKEISFNNTLLDM 311
           EV  E   + +   L             G    GR   A +L  A   K +   N ++  
Sbjct: 234 EVMPERNEVSWTAML------------LGYTHSGRMREASSLFDAMPVKPVVVCNEMIMG 281

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           +   G++D A RVF+ M ER   +W++MI  Y R+G    A+ LFR M REG+  +  ++
Sbjct: 282 FGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSL 341

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            S+L  C     L+ GK VH  +  ++    LYV++ L+ MY KCG++  A+ VFN+ P+
Sbjct: 342 ISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPL 401

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI 480
           KD+V WN+MI           AL++F  M  +   PD VT   +L AC+    ++ G E+
Sbjct: 402 KDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLEL 461

Query: 481 HGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
              +  ++ +         +VD+  +   +  A  L + +P + D I W  ++     H
Sbjct: 462 FETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTH 520



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 135/336 (40%), Gaps = 68/336 (20%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIV- 128
           IG +CE G L++A  +    E  K +  T+ +++   A    ++  +K+  ++ E   V 
Sbjct: 186 IGGYCEEGRLDEARALF--DEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVS 243

Query: 129 -------------------------IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKV 163
                                    +   V+ ++++  F   G++ + RRVF  +     
Sbjct: 244 WTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDN 303

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA---------------------------- 195
             W+ ++  Y + G   E+L LF++MQ  G+A                            
Sbjct: 304 GTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQ 363

Query: 196 -------ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                   D Y  S ++      GN  R K   ++F+    +DVV WN MI+GY  +G+ 
Sbjct: 364 LVRSEFDQDLYVASVLITMYVKCGNLVRAK---QVFNRFPLKDVVMWNSMITGYSQHGLG 420

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV-HAFALKACFSKEISFNNT 307
           E+ L VF +M + G   D  T + VLS C+  G +  G  +      K      I     
Sbjct: 421 EEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYAC 480

Query: 308 LLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 342
           L+D+  +   ++ A+++ EKM  E   + W +++  
Sbjct: 481 LVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGA 516


>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/625 (41%), Positives = 378/625 (60%), Gaps = 31/625 (4%)

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
           S+ D  + N +I      G   + L+V  +  N   +    T   ++  C    +L  G 
Sbjct: 43  SNGDSNNNNPLIQSLCKQGNLNQALQVLSQEPNPTQH----TYELLILSCTRQNSLPQGI 98

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM-----IAG 342
            +H   +     ++      L++MYS+   +D A +VF+K  +R++  W ++     +AG
Sbjct: 99  DLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAG 158

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD----GLLEIGKDVHDYIKEND 398
           Y RE V D    L+R M R G+  D +  T +L AC        LL  G+++H +I  + 
Sbjct: 159 YGRE-VLD----LYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHG 213

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFV 448
            +  +++   L+DMYA+ G + +A  VF+QMPVK++VSW+ MI           AL+LF 
Sbjct: 214 FEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFR 273

Query: 449 AML---QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
            M+   Q+  P+ VTM  +L ACA+LAALE+G+ +HGYILR G+ +   V +A+V +Y +
Sbjct: 274 KMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYAR 333

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           CG L L   +F+ +  +D++SW  +I+ YG+HGFG  AI  F +M   G+ P  +SF+SV
Sbjct: 334 CGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSV 393

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L ACSH+GLV+EG   F  M     I P +EHYACMVDLL R   L EA + I+ M + P
Sbjct: 394 LGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEP 453

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
              +WGSLL  CRIH  V+LAE+    +FELEP N G YVLLA++YAEA+ W EVK+++ 
Sbjct: 454 GPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKM 513

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +  RGL+K PG S IEI+ K+  F++    +P  +++ +LL +L +EMK +GY P T+ 
Sbjct: 514 LLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKV 573

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L + D  EKE  + GHSEKLA+AFG++N   G+TIR+TKNLR+C DCH + KF+SK A 
Sbjct: 574 VLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFAN 633

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REI++RD NRFH F+DG CSC  +W
Sbjct: 634 REILVRDVNRFHLFQDGVCSCGDYW 658



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 224/454 (49%), Gaps = 46/454 (10%)

Query: 30  KPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSS 89
           KP   P  +S K      + P + + S      + N N  I   C+ GNL +A++VL  S
Sbjct: 17  KPFHKPTAISPKPQCCLALRPSTTTRSNG---DSNNNNPLIQSLCKQGNLNQALQVL--S 71

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           ++      TY  ++  C    SL  G  +H  +   G    D  L +KL+ M+     + 
Sbjct: 72  QEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDG-SDQDPFLATKLINMYSELDSID 130

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CL 208
             R+VF+K     +++WN L    +  G  +E L L+++M  +G+ +D +T++ VLK C+
Sbjct: 131 NARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACV 190

Query: 209 A------VVGNSRRVK-----------------------------DAHKLFDELSDRDVV 233
           A      ++ N R +                              +A ++FD++  ++VV
Sbjct: 191 ASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVV 250

Query: 234 SWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           SW+ MI+ Y  NG   + LE+F++M+  N     +  TMV+VL  CA   AL  G+ +H 
Sbjct: 251 SWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHG 310

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
           + L+      +   + L+ +Y++CG+L+   RVFE+M +R VVSW S+I+ Y   G    
Sbjct: 311 YILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRK 370

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD-YIKENDMQSSLYVSNALM 410
           AI++F+ M+ +G+ P   +  S+L AC+  GL+E GK + +  ++ + +  S+     ++
Sbjct: 371 AIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMV 430

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
           D+  +   + +A  + + M ++     W +++G+
Sbjct: 431 DLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGS 464



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 189/390 (48%), Gaps = 21/390 (5%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G+L +  +V ++  N     + LL+   ++  +  + + L + +   G   D +  +   
Sbjct: 61  GNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLAT--- 117

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K + +      + +A K+FD+   R +  WN +       G   + L++++ M  +G   
Sbjct: 118 KLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPS 177

Query: 266 DLATMVTVLSGCANCGA----LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           D  T   VL  C    A    L+ GR +H   L+  F   +    TLLDMY++ G +  A
Sbjct: 178 DRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNA 237

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVYAITSILHACA 379
            RVF++M  ++VVSW++MIA Y++ G    A+ LFR M+ E  +  P+   + S+L ACA
Sbjct: 238 SRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACA 297

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               LE GK +H YI    + S L V +AL+ +YA+CG++     VF +M  +D+VSWN+
Sbjct: 298 ALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNS 357

Query: 440 MIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-H 487
           +I           A+ +F  M+ Q   P  ++   +L AC+    +E G+ +   ++R H
Sbjct: 358 LISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGH 417

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFD 517
            I         +VD+  +   L  A  + D
Sbjct: 418 KIFPSVEHYACMVDLLGRANRLDEAAKIID 447


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 260/782 (33%), Positives = 415/782 (53%), Gaps = 45/782 (5%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K DT  + ++LQ C+  K+++ G++VH  + + G   ++ V G  L+ M+  CG + E +
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCG-HLIQMYAQCGSVPEAQ 59

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--- 209
           +VF  ++   VF W  ++  Y + G++  +L +F +MQ   +     T+  +L   A   
Sbjct: 60  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 119

Query: 210 ---------------------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMIS 240
                                 VG +          V+ A   F  L  RDVVSW  MI+
Sbjct: 120 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 179

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
             + +        +++ M   G   +  T+ TV +   +   L  G+ V+          
Sbjct: 180 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMES 239

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++   N+ ++M+   G L  A R+FE M +R VV+W  +I  Y +   F  A+RLF  + 
Sbjct: 240 DVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQ 299

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           ++G++ +      +L+       L  GK +H+ +KE        V+ ALM +Y +C +  
Sbjct: 300 QDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPG 359

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACA 469
            A  +F  M  KD+++W  M            AL LF  M L+   P   T+  +L  CA
Sbjct: 360 QAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCA 419

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            LAAL++GR+IH +I+ +    +  V  A+++MY KCG +  A S+F+ +  +D++ W  
Sbjct: 420 HLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNS 479

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           M+  Y  HG+  + +  FN M+  G++ D VSF+SVL A SHSG V +G+++F  M  + 
Sbjct: 480 MLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDF 539

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFI-EMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
           +I P  E Y C+VDLL R G + EA   + ++    PD  +W +LL  CR H++   A+ 
Sbjct: 540 SITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKA 599

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            AE V E +P ++G YV+L+NVYA A  W+ V ++R+ +  RG+KK PG S IEI  +V+
Sbjct: 600 AAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVH 659

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            F+ G  SHP    I + L  L  EM+  GY P T+  L + ++  KE  L  HSE+LA+
Sbjct: 660 EFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAI 719

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           AFG+++ P G  +RV KNLRVC DCH   K++SK   REI++RD++RFH+FKDGRCSC+ 
Sbjct: 720 AFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKD 779

Query: 829 FW 830
           +W
Sbjct: 780 YW 781



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 235/484 (48%), Gaps = 47/484 (9%)

Query: 70  IGRFCEVGNLEKAMEVLYS-SEKSKIDTK-TYCSILQLCADLKSLEDGKKVHSIICESGI 127
           IG +C+ G+ ++A+ + Y   E+  + TK TY +IL  CA  +SL+DG ++H  I + G 
Sbjct: 77  IGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGF 136

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              D  +G+ L+ M+  CG ++     F ++++  V  W  ++    +   F  + +L++
Sbjct: 137 E-GDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYR 195

Query: 188 KMQSLGIAADSYTFSCVLK--------------------------------CLAVVGNSR 215
           +MQ  G+  +  T   V                                   + + GN+ 
Sbjct: 196 RMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAG 255

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
            + DA +LF+++ DRDVV+WN +I+ Y+ N    + + +F  +   G   +  T V +L+
Sbjct: 256 LLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLN 315

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
              +  +L  G+ +H    +A + ++      L+ +Y +C     A ++F  MG + V++
Sbjct: 316 VYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVIT 375

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           WT M   YA+ G    A++LF+ M  EG  P    + ++L  CA    L+ G+ +H +I 
Sbjct: 376 WTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHII 435

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LD 445
           EN  +  + V  AL++MY KCG MA+A SVF +M  +DI+ WN+M+GA          L 
Sbjct: 436 ENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQ 495

Query: 446 LFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIVDMY 503
           LF  M L   + D V+   +L A +   ++  G +    +L+   I+    +   +VD+ 
Sbjct: 496 LFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLL 555

Query: 504 VKCG 507
            + G
Sbjct: 556 GRAG 559


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/651 (39%), Positives = 383/651 (58%), Gaps = 44/651 (6%)

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML---NLGFNVDLATMV 271
           R ++ A  LFD++ +RDVVSWN M+SGY  NG  ++  E+F EM    ++ +N  LA  V
Sbjct: 44  RNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYV 103

Query: 272 T-------------------VLSGCANCGALMFGRAVHAFAL--KACFSKEISFNNTLLD 310
                               +   C   G +   R V A  +  +     E+S+N T++ 
Sbjct: 104 QNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWN-TMIS 162

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
            Y++ G+L  A R+FE+   R V +WT+M++GY + G+ D A R+F GM     E +  +
Sbjct: 163 GYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----EKNSVS 218

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
             +I+        ++  +++ + +   ++ S     N ++  YA+ G +A A + F++MP
Sbjct: 219 WNAIIAGYVQCKRMDQARELFEAMPCQNVSSW----NTMITGYAQNGDIAQARNFFDRMP 274

Query: 431 VKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGRE 479
            +D +SW  +I           AL LFV M ++ E  +  T    L  CA +AALE G++
Sbjct: 275 QRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQ 334

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +HG +++ G+ +   V NA++ MY KCG +  A  +F+ I  K+++SW  MIAGY  HGF
Sbjct: 335 VHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGF 394

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
           G +A+  F  M++ GI PD+V+ + VL ACSH+GLVD+G  +F  M  +  I    +HY 
Sbjct: 395 GKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYT 454

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           CM+DLL R G L +A   ++ MP  PDA  WG+LL   RIH   +L EK A+ +FE+EPD
Sbjct: 455 CMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPD 514

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           N+G YVLL+N+YA + +W +V ++R ++  RG+KK PG SW+E++ K++ F  G S HP 
Sbjct: 515 NSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPE 574

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
             +I + L+ L L+MK+EGY   T+  L + +E EK   L  HSEKLA+AFGIL +PAG+
Sbjct: 575 RDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGR 634

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            IRV KNLRVC DCH   K +SK   R I+LRDS+RFHHF  G+CSC  +W
Sbjct: 635 PIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 222/448 (49%), Gaps = 39/448 (8%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           +V  G +++ RR+F    + ++  WN +M  Y K     ++  +F +M       D  ++
Sbjct: 102 YVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPE----RDEVSW 157

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
           + ++   A  G    + +A +LF+E   RDV +W  M+SGY+ NG+ ++   VF  M   
Sbjct: 158 NTMISGYAQNGE---LLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP-- 212

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               +  +   +++G   C  +   R +  F    C  + +S  NT++  Y++ GD+  A
Sbjct: 213 --EKNSVSWNAIIAGYVQCKRMDQAREL--FEAMPC--QNVSSWNTMITGYAQNGDIAQA 266

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
              F++M +R  +SW ++IAGYA+ G  + A+ LF  M R+G   +    TS L  CA  
Sbjct: 267 RNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEI 326

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             LE+GK VH  + +  ++S  YV NAL+ MY KCG++ DA  VF  +  K++VSWNTMI
Sbjct: 327 AALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMI 386

Query: 442 G----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGRE-IHGYILRHGI 489
                      AL LF +M +    PD VTM  +L AC+    +++G E  +     +GI
Sbjct: 387 AGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGI 446

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG---FGCDAIA 545
           +A+      ++D+  + G L  A++L   +P   D  +W  ++    +HG    G  A  
Sbjct: 447 TANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAK 506

Query: 546 TFNDMRQAGIEPDEVS---FISVLYACS 570
              +M     EPD       +S LYA S
Sbjct: 507 MIFEM-----EPDNSGMYVLLSNLYAAS 529



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 201/450 (44%), Gaps = 43/450 (9%)

Query: 52  SASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLK 110
           +  I   + CK   ++N  +  + + G +E A  +  S  K+  +  ++  ++       
Sbjct: 80  AKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES--KADWELISWNCMMGGYVKRN 137

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
            L D + +   + E      D V  + ++  +   G+L E +R+F +     VF W  ++
Sbjct: 138 RLVDARGIFDRMPER-----DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMV 192

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----------------------L 208
             Y + G   E+  +F  M      + +   +  ++C                       
Sbjct: 193 SGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNT 252

Query: 209 AVVGNSRR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
            + G ++   +  A   FD +  RD +SW  +I+GY  +G  E+ L +F EM   G  ++
Sbjct: 253 MITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLN 312

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
            +T  + LS CA   AL  G+ VH   +KA         N LL MY KCG++D A  VFE
Sbjct: 313 RSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFE 372

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
            + E+ VVSW +MIAGYAR G    A+ LF  M + GI PD   +  +L AC+  GL++ 
Sbjct: 373 GIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDK 432

Query: 387 GKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGAL 444
           G +  +   ++  + ++      ++D+  + G + DA+++   MP + D  +W  ++GA 
Sbjct: 433 GTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGAS 492

Query: 445 DLF---------VAMLQNFEPDGVTMACIL 465
            +            M+   EPD   M  +L
Sbjct: 493 RIHGNTELGEKAAKMIFEMEPDNSGMYVLL 522



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 130/319 (40%), Gaps = 68/319 (21%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           + ++  +   GD+ + R  F+++       W  ++  Y+++G  +E+L+LF +M+  G  
Sbjct: 251 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 310

Query: 196 ADSYTFSCVLKCLA------------------------VVGNS--------RRVKDAHKL 223
            +  TF+  L   A                         VGN+          + DA+ +
Sbjct: 311 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 370

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           F+ + +++VVSWN MI+GY  +G  ++ L +F+ M   G   D  TMV VLS C++ G  
Sbjct: 371 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTG-- 428

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
           +  +    F                   YS   D    I    K        +T MI   
Sbjct: 429 LVDKGTEYF-------------------YSMTQDY--GITANSK-------HYTCMIDLL 460

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS- 402
            R G  D A  L + M     EPD     ++L A    G  E+G+     I E +  +S 
Sbjct: 461 GRAGRLDDAQNLMKNMP---FEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSG 517

Query: 403 LYVSNALMDMYAKCGSMAD 421
           +YV   L ++YA  G   D
Sbjct: 518 MYV--LLSNLYAASGRWGD 534



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 21/279 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G  E+A+ +    ++   +++  T+ S L  CA++ +LE GK+VH  +
Sbjct: 280 SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV 339

Query: 123 CESGIVIDDG-VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            ++G+  + G  +G+ L+ M+  CG++ +   VF  I+  +V  WN ++  Y++ G  KE
Sbjct: 340 VKAGL--ESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKE 397

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS----WNC 237
           +L LF+ M+  GI  D  T   VL   +  G     K     +    D  + +    + C
Sbjct: 398 ALMLFESMKKTGILPDDVTMVGVLSACSHTGLVD--KGTEYFYSMTQDYGITANSKHYTC 455

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MI      G  +    + K   N+ F  D AT   +L      G    G      A K  
Sbjct: 456 MIDLLGRAGRLDDAQNLMK---NMPFEPDAATWGALLGASRIHGNTELGEK----AAKMI 508

Query: 298 FSKEISFNNT---LLDMYSKCGDLDGAIRVFEKMGERSV 333
           F  E   +     L ++Y+  G      R+  +M +R V
Sbjct: 509 FEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGV 547


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/531 (45%), Positives = 330/531 (62%), Gaps = 11/531 (2%)

Query: 311  MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
            MY     +D A  VFE +       W  MI G+A +G F  ++ L+  M+ +G++PD +A
Sbjct: 761  MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820

Query: 371  ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
                L +CA    L+ GK +H ++      + L+V  AL+DMYAKCG +  A  VF++M 
Sbjct: 821  FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880

Query: 431  VKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACASLAALERGRE 479
            V+D+VSW +MI            L  F  M  +   P+ V++  +L AC +L AL +G  
Sbjct: 881  VRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEW 940

Query: 480  IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
             H Y+++ G   D  VA AI+DMY KCG L LAR LFD    KDL+ W+ MIA YG+HG 
Sbjct: 941  FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGH 1000

Query: 540  GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
            G  AI  F+ M +AG+ P  V+F  VL ACSHSGL++EG  +F +M  E  I  KL +YA
Sbjct: 1001 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYA 1060

Query: 600  CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
            CMVDLL R G LSEA   IE MPV PDA+IWGSLL  CRIH+ + LAEK+A+H+F L+P 
Sbjct: 1061 CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPV 1120

Query: 660  NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
            + GY+VLL+N+YA   +W EV+K+R+ ++RRG  K  G S +E   +V+ F  G  SHP 
Sbjct: 1121 HAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQ 1180

Query: 720  AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
             +K+ + L+ L   MK  GY P T + L + +E  KE AL  HSE+LA+AFG++N   G 
Sbjct: 1181 WEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGT 1240

Query: 780  TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            T+R+TKNLR+CGDCH   K +SK   R I++RD +RFH F+DG CSC  +W
Sbjct: 1241 TLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291



 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/693 (33%), Positives = 380/693 (54%), Gaps = 51/693 (7%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           + Q C + +S+    ++HS + ++GI + D    +KL  ++  C  L+  R+VF++  + 
Sbjct: 10  LFQACNNGRSVS---QLHSQVFKTGI-LHDTFFATKLNSLYAKCASLQAARKVFDETPHP 65

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSCVLKCLA----------- 209
            V +WN  +  Y +   ++E+L LF  M  + G A D++T    LK  A           
Sbjct: 66  NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125

Query: 210 --------------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
                          VG++         ++ +A K+F+E    D V W  M++GY  N  
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND 185

Query: 248 AEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
            E+ L +F +M+ +   V D  T+V+V+S CA    +  G  VH   ++  F  ++   N
Sbjct: 186 PEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVN 245

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           +LL++Y+K G    A  +F KM E+ V+SW++MIA YA     + A+ LF  M+ +  EP
Sbjct: 246 SLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEP 305

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           +   + S L ACA    LE GK +H        +    VS AL+DMY KC    +A  +F
Sbjct: 306 NSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLF 365

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALE 475
            ++P KD+VSW  ++           ++ +F  ML +  +PD V +  IL A + L   +
Sbjct: 366 QRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQ 425

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
           +   +HGY++R G +++  V  +++++Y KCG L  A  LF  +  +D++ W+ MIA YG
Sbjct: 426 QALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYG 485

Query: 536 MHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
           +HG G +A+  F+ M + + + P+ V+F+S+L ACSH+GLV+EG + F+ M ++  + P 
Sbjct: 486 IHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPD 545

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
            EH+  MVDLL R G L +A   I  MP+     +WG+LL  CRIHH +++ E  A+++F
Sbjct: 546 SEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLF 605

Query: 655 ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG 714
            L+P + GYY+LL+N+YA   KW+ V +LR +I  RGLKK  G S +E++G V+ F+A  
Sbjct: 606 WLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASD 665

Query: 715 SSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
             HP ++KI  LL++L  +M +E Y P   + L
Sbjct: 666 RFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLL 698



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 256/519 (49%), Gaps = 22/519 (4%)

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE 226
            +L+  +    N +    L  ++   GI  D++ F+  L  L        ++ A K+FDE
Sbjct: 5   QVLVDLFQACNNGRSVSQLHSQVFKTGILHDTF-FATKLNSL--YAKCASLQAARKVFDE 61

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMF 285
               +V  WN  +  Y      E+ L +F  M+   G   D  T+   L  CA    L  
Sbjct: 62  TPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLEL 121

Query: 286 GRAVHAFALKAC-FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           G+ +H FA K      ++   + L+++YSKCG +  A++VFE+      V WTSM+ GY 
Sbjct: 122 GKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQ 181

Query: 345 REGVFDGAIRLFRGMV-REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
           +    + A+ LF  MV  + +  D   + S++ ACA    ++ G  VH  +   +    L
Sbjct: 182 QNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDL 241

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN 453
            + N+L+++YAK G    A ++F++MP KD++SW+TMI           AL+LF  M++ 
Sbjct: 242 PLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEK 301

Query: 454 -FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
            FEP+ VT+   L ACA    LE G++IH   +  G   D +V+ A++DMY+KC     A
Sbjct: 302 RFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEA 361

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             LF  +P KD++SW  +++GY  +G    ++  F +M   GI+PD V+ + +L A S  
Sbjct: 362 VDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSEL 421

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           G+  +       +         +   A +++L S+ G+L +A +  + M +  D  IW S
Sbjct: 422 GIFQQALCLHGYV-VRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM-IVRDVVIWSS 479

Query: 633 LLCGCRIHHEVKLAEKVAEHVFE---LEPDNTGYYVLLA 668
           ++    IH     A ++ + + +   + P+N  +  +L+
Sbjct: 480 MIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILS 518



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 248/508 (48%), Gaps = 57/508 (11%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLY---SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +N+ +  +C     E+ + + +    +     D  T    L+ CA L+ LE GK +H   
Sbjct: 70  WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA 129

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++  +  D  +GS LV ++  CG + E  +VF +       +W  ++  Y +  + +E+
Sbjct: 130 KKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEA 189

Query: 183 LYLFKKM---------------------QSLGIAADSYTFSCVLK------------CLA 209
           L LF +M                     Q L + A S     V++             L 
Sbjct: 190 LALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLN 249

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           +   +   K A  LF ++ ++DV+SW+ MI+ Y  N  A + L +F EM+   F  +  T
Sbjct: 250 LYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVT 309

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V+ L  CA    L  G+ +H  A+   F  + S +  L+DMY KC   D A+ +F+++ 
Sbjct: 310 VVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP 369

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ++ VVSW ++++GYA+ G+   ++ +FR M+ +GI+PD  A+  IL A +  G+ +    
Sbjct: 370 KKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALC 429

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H Y+  +   S+++V  +L+++Y+KCGS+ DA  +F  M V+D+V W++MI        
Sbjct: 430 LHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGR 489

Query: 443 ---ALDLFVAMLQN--FEPDGVTMACILPACASLAALERG-----REIHGYILRHGISAD 492
              AL++F  M++N    P+ VT   IL AC+    +E G     R +H Y LR     D
Sbjct: 490 GGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLR----PD 545

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIP 520
                 +VD+  + G L  A  + + +P
Sbjct: 546 SEHFGIMVDLLGRIGQLGKAMDIINRMP 573



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 222/459 (48%), Gaps = 30/459 (6%)

Query: 269 TMVTVLSGCANCGALMFGRAV---HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
            +V +   C N      GR+V   H+   K     +  F   L  +Y+KC  L  A +VF
Sbjct: 6   VLVDLFQACNN------GRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV-REGIEPDVYAITSILHACACDGLL 384
           ++    +V  W S +  Y RE  ++  +RLF  M+   G  PD + I   L ACA   +L
Sbjct: 60  DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119

Query: 385 EIGKDVHDYIKEND-MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           E+GK +H + K+ND + S ++V +AL+++Y+KCG M +A  VF +    D V W +M+  
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTG 179

Query: 443 ---------ALDLF--VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                    AL LF  + M+     D VT+  ++ ACA L  ++ G  +HG ++R     
Sbjct: 180 YQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDG 239

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D  + N+++++Y K G   +A +LF  +P KD+ISW+ MIA Y  +    +A+  F++M 
Sbjct: 240 DLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMI 299

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
           +   EP+ V+ +S L AC+ S  ++EG +   +  ++   E        ++D+  +    
Sbjct: 300 EKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWK-GFELDFSVSTALIDMYMKCSCP 358

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLAN 669
            EA    + +P   D   W +LL G   +     +  V  ++    ++PD      +LA 
Sbjct: 359 DEAVDLFQRLP-KKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILA- 416

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKN--PGCSWIEIKGK 706
             +E   +++   L   + R G   N   G S IE+  K
Sbjct: 417 ASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSK 455



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 175/362 (48%), Gaps = 35/362 (9%)

Query: 116  KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
            KK H+ I   G+  D  +L +K   M+V+   +     VF  I N   F+WN+++  ++ 
Sbjct: 737  KKTHAKIFAYGLQYDSRIL-TKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795

Query: 176  TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK------------- 222
             G F  SL L+ KM   G+  D + F   LK  A + + +R K  H+             
Sbjct: 796  DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855

Query: 223  -------------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
                               +FD+++ RD+VSW  MISGY  NG   + L  F  M + G 
Sbjct: 856  DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915

Query: 264  NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
              +  ++++VL  C N GAL  G   H++ ++  F  +I     ++DMYSKCG LD A  
Sbjct: 916  IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975

Query: 324  VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
            +F++   + +V W++MIA Y   G    AI LF  MV+ G+ P     T +L AC+  GL
Sbjct: 976  LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035

Query: 384  LEIGKDVHDYIKENDMQSSLYVSNALM-DMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
            LE GK     + E  + +    + A M D+  + G +++A  +   MPV+ D   W +++
Sbjct: 1036 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 1095

Query: 442  GA 443
            GA
Sbjct: 1096 GA 1097



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 170/336 (50%), Gaps = 15/336 (4%)

Query: 216  RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
            R+  A  +F+++ +     WN MI G+  +G     LE++ +M+  G   D       L 
Sbjct: 767  RIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALK 826

Query: 276  GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
             CA    L  G+ +H   +    S ++  +  L+DMY+KCGD++ A  VF+KM  R +VS
Sbjct: 827  SCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVS 886

Query: 336  WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
            WTSMI+GYA  G     +  F  M   G+ P+  +I S+L AC   G L  G+  H Y+ 
Sbjct: 887  WTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVI 946

Query: 396  ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
            +   +  + V+ A+MDMY+KCGS+  A  +F++   KD+V W+ MI           A+D
Sbjct: 947  QTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAID 1006

Query: 446  LFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN--AIVDM 502
            LF  M++    P  VT  C+L AC+    LE G+ ++  ++       R ++N   +VD+
Sbjct: 1007 LFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGK-MYFQLMTEEFVIARKLSNYACMVDL 1065

Query: 503  YVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
              + G L  A  L + +P + D   W  ++    +H
Sbjct: 1066 LGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIH 1101



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 139/608 (22%), Positives = 253/608 (41%), Gaps = 86/608 (14%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T  S LQ CA  ++LE+GKK+H I    G  +D  V  + L+ M++ C    E   +
Sbjct: 306 NSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSV-STALIDMYMKCSCPDEAVDL 364

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG-- 212
           F ++    V  W  L+  Y++ G   +S+ +F+ M S GI  D+     +L   + +G  
Sbjct: 365 FQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIF 424

Query: 213 ---------------NSR---------------RVKDAHKLFDELSDRDVVSWNCMISGY 242
                          NS                 + DA KLF  +  RDVV W+ MI+ Y
Sbjct: 425 QQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAY 484

Query: 243 IANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGAL-----MFGRAVHAFALKA 296
             +G   + LE+F +M+ N     +  T +++LS C++ G +     +F R VH + L+ 
Sbjct: 485 GIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRP 544

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
               +      ++D+  + G L  A+ +  +M          + AG    G   GA R+ 
Sbjct: 545 ----DSEHFGIMVDLLGRIGQLGKAMDIINRM---------PIPAGPHVWGALLGACRIH 591

Query: 357 RGM-VREGIEPDVYAITS--------ILHACACDGLLEIGKDVHDYIKENDM-----QSS 402
             + + E    +++ +          + +  A DG  +   ++   IKE  +     QS 
Sbjct: 592 HNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSM 651

Query: 403 LYVSNALMDMYAKCGSMADAESVFN-------QM------PVKDIVSWNTMIGALDLFVA 449
           + V   +    A      D++ ++        QM      P  D +  +T  GA+  F  
Sbjct: 652 VEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHDT--GAVLQFWQ 709

Query: 450 MLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
            ++  E    T+    P   +++     ++ H  I  +G+  D  +      MYV    +
Sbjct: 710 RIKATESKYKTIGSA-PGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRI 768

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             A  +F+ IP      W +MI G+   G    ++  ++ M + G++PD+ +F   L +C
Sbjct: 769 DAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSC 828

Query: 570 SHSGLVD-EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
             +GL D +  +  +     C     L   A +VD+ ++ G++  A    + M V  D  
Sbjct: 829 --AGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVR-DLV 885

Query: 629 IWGSLLCG 636
            W S++ G
Sbjct: 886 SWTSMISG 893



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 135/318 (42%), Gaps = 47/318 (14%)

Query: 66   YNAEIGRFCEVGNLEKAMEVLYSS--EKS-KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N  I  F   G    ++E LYS   EK  K D   +   L+ CA L  L+ GK +H  +
Sbjct: 786  WNVMIRGFATDGRFLSSLE-LYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHL 844

Query: 123  ----CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
                C + + +D     + LV M+  CGD++  R VF+K+    +  W  ++  Y+  G 
Sbjct: 845  VCCGCSNDLFVD-----AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGY 899

Query: 179  FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK---------------- 222
              E+L  F  M+S G+  +  +   VL     +G  R+ +  H                 
Sbjct: 900  NSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATA 959

Query: 223  ----------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                            LFDE + +D+V W+ MI+ Y  +G   K +++F +M+  G    
Sbjct: 960  IMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPS 1019

Query: 267  LATMVTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
              T   VLS C++ G L  G+       +    ++++S    ++D+  + G L  A+ + 
Sbjct: 1020 HVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLI 1079

Query: 326  EKMG-ERSVVSWTSMIAG 342
            E M  E     W S++  
Sbjct: 1080 ENMPVEPDASIWGSLLGA 1097


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/778 (33%), Positives = 409/778 (52%), Gaps = 47/778 (6%)

Query: 97   KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
             T  ++++ C        G ++   + +SG+      + + L+ MF     ++E  RVFN
Sbjct: 351  NTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFN 410

Query: 157  KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--------- 207
             +       WN ++   +  G F+ESL  F  M+      D  T S +L           
Sbjct: 411  NMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKW 470

Query: 208  -----------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
                                   L++   +   +DA  +F  +  RD++SWN M++ ++ 
Sbjct: 471  GRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVE 530

Query: 245  NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            +G     + +  EML     ++  T  T LS C N   L   + VHAF +       +  
Sbjct: 531  DGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLII 587

Query: 305  NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
             NTL+ MY K G +D A +V + M ER VV+W ++I G+A +   +  I+ F  M REG+
Sbjct: 588  GNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGL 647

Query: 365  EPDVYAITSILHAC-ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
              +   I ++L  C + D LL+ G  +H +I     +   YV ++L+ MYA+CG +  + 
Sbjct: 648  LSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSS 707

Query: 424  SVFNQMPVKDIVSWNTMIGALDL---------FVAMLQN--FEPDGVTMACILPACASLA 472
             +F+ +  K+  +WN +  A            F+A ++N   + D  + +  L    +L 
Sbjct: 708  YIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLT 767

Query: 473  ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
             L+ G+++H +I++ G   D  V NA +DMY KCG +     +  +   +   SW I+I+
Sbjct: 768  VLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILIS 827

Query: 533  GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
                HGF   A   F++M   G++PD V+F+S+L ACSH GLVDEG  +F+ M  E  + 
Sbjct: 828  ALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVP 887

Query: 593  PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
              +EH  C++DLL R+G L+EA  FI+ MPV P+  +W SLL  C++H  ++L  K A+ 
Sbjct: 888  TAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADR 947

Query: 653  VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
            +FEL   +   YVL +NV A  ++W +V+ +R+++  + LKK P CSWI++K KV  F  
Sbjct: 948  LFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGM 1007

Query: 713  GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
            G   HP + +I + L+ LR   + EG+ P T YAL + DE +KE  L  HSE++A+AFG+
Sbjct: 1008 GDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGL 1067

Query: 773  LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +N   G  +R+ KNLRVCGDCH + K +SK   R+IV+RDS RFHHF  G+CSC  +W
Sbjct: 1068 INSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 244/500 (48%), Gaps = 49/500 (9%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           GK +H++ C   ++  +    + LV M+   G +K  + VF+K+ +     WN ++  + 
Sbjct: 166 GKALHAL-CVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSC---------------------VLKC------ 207
           + G + +++  F  M   G+   SY  +                      V+KC      
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284

Query: 208 ------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                 L   G    V +A+KLF+E+ + ++VSW  ++  Y  NG  ++ L +++ + + 
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF-SKEISFNNTLLDMYSKCGDLDG 320
           G      TM TV+  C   G    G  +    +K+   +  +S  N+L+ M+     ++ 
Sbjct: 345 GLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEE 404

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A RVF  M ER  +SW S+I   A  G F+ ++  F  M R   + D   I+++L AC  
Sbjct: 405 ASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGS 464

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              L+ G+ +H  I ++ ++S++ V N+L+ MYA+ GS  DAE VF+ MP +D++SWN+M
Sbjct: 465 AQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSM 524

Query: 441 IG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGI 489
           +           A+ L V ML+  +  + VT    L AC +   LE+ + +H +++   +
Sbjct: 525 MASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN---LEKLKIVHAFVIHFAV 581

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             +  + N +V MY K G++  A+ +  ++P +D+++W  +I G+         I  FN 
Sbjct: 582 HHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNL 641

Query: 550 MRQAGIEPDEVSFISVLYAC 569
           MR+ G+  + ++ +++L  C
Sbjct: 642 MRREGLLSNYITIVNLLGTC 661



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 185/362 (51%), Gaps = 15/362 (4%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+A+HA  +K    +   + NTL++MYSK G +  A  VF+KM +R+  SW +MI+G+ R
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG-LLEIGKDVHDYIKENDMQSSLY 404
            G +  A++ F  M   G+ P  Y I S++ AC   G + E  + +H Y+ +  + S+++
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNFEPDG 458
           V  +L+  Y   GS+++A  +F ++   +IVSW +++      G     + + ++   +G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345

Query: 459 V-----TMACILPACASLAALERGREIHGYILRHGI-SADRNVANAIVDMYVKCGVLVLA 512
           +     TMA ++  C        G +I G +++ G+ ++  +VAN+++ M+     +  A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +F+ +  +D ISW  +I     +G   +++  F  MR+   + D ++  ++L AC  +
Sbjct: 406 SRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSA 465

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
             +  G R  + +  +  +E  +     ++ + ++ G+  +A      MP A D   W S
Sbjct: 466 QHLKWG-RGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMP-ARDLISWNS 523

Query: 633 LL 634
           ++
Sbjct: 524 MM 525



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 152/331 (45%), Gaps = 30/331 (9%)

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
           +GK +H    ++ +Q + + +N L++MY+K GS+  A+ VF++M  ++  SWN MI    
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224

Query: 443 -------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERG-REIHGYILRHGISADR 493
                  A+  F  M +N   P    +A ++ AC     +  G R+IHGY+++ G+ ++ 
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            V  +++  Y   G +  A  LF+ I   +++SWT ++  Y  +G   + +  +  +R  
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV--DLLSRTGN- 610
           G+     +  +V+  C   G    G++    +     I+  L+  +  V   L+S  GN 
Sbjct: 345 GLICTGNTMATVIRTCGMFGDKTMGYQILGDV-----IKSGLDTSSVSVANSLISMFGNY 399

Query: 611 --LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN--TGYYVL 666
             + EA R    M    D   W S++      H  +  E +  H F +   +  T Y  +
Sbjct: 400 DSVEEASRVFNNMQ-ERDTISWNSIITASA--HNGRFEESLG-HFFWMRRTHPKTDYITI 455

Query: 667 LANVYA--EAEKWEEVKKLREKISRRGLKKN 695
            A + A   A+  +  + L   I++ GL+ N
Sbjct: 456 SALLPACGSAQHLKWGRGLHGLITKSGLESN 486


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/658 (38%), Positives = 388/658 (58%), Gaps = 24/658 (3%)

Query: 188 KMQSLGIAADSYTFSCVL-KCLAVVGNSR--RVKDAHKLFDELSDRDVVSWNCMISGYIA 244
           ++ +L I   S     V  + LA+  + R   ++ AH LFD + +  +VSWN +I  YI 
Sbjct: 33  QLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIE 92

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           N  +   + +F ++L   F  D  T+  VL GCA  GAL  G+ +H   LK  F  +   
Sbjct: 93  NQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFV 151

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            ++L+ MYSKCG+++   +VF++M ++ VVSW S+I GYAR G  + A+ +F  M     
Sbjct: 152 LSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMP---- 207

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           E D ++ T ++   +  G LE  +DV D +   +  S     NA+++ Y K G    A+ 
Sbjct: 208 EKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSW----NAMINGYMKAGDSNTAKE 263

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAA 473
           +F+QMP + +V+WN+MI           AL LF  ML ++  P+  T+   + A + + +
Sbjct: 264 LFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVS 323

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           L  GR +H YI++ G   D  +   +++MY KCG +  A  +F  IP K L  WT +I G
Sbjct: 324 LGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVG 383

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
            GMHG     +  F++M + G++P  ++FI VL ACSH+G  ++  R+F MM Y+  I+P
Sbjct: 384 LGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKP 443

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            +EHY C++D+L R G+L EA   IE MP+  +  IW SLL G R H  +++ E  A+H+
Sbjct: 444 SIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHL 503

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
            +L PD TG YV+L+N+YA A  WE+V+++RE + ++G+KK+PGCS IE +G ++ F+ G
Sbjct: 504 IDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVG 563

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE-MEKEVALCGHSEKLAMAFGI 772
             SHP  ++I   L  ++ ++   G+ P T   L+  +E  EKE  L  HSE+LA+AFG+
Sbjct: 564 DKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGL 623

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LN+  G  IR+ KNLR+C DCH + K +S    REI++RD +RFHHFK G CSC+ FW
Sbjct: 624 LNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 199/382 (52%), Gaps = 41/382 (10%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D+ T   +L+ CA L +L++GK++H ++ + G  +D  VL S LV M+  CG+++  R+V
Sbjct: 113 DSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSS-LVSMYSKCGEIELCRKV 171

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+++++  V  WN L+  Y++ G  + +L +F++M       DS++++ ++  L+  G  
Sbjct: 172 FDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPE----KDSFSWTILIDGLSKSGKL 227

Query: 215 RRVKD----------------------------AHKLFDELSDRDVVSWNCMISGYIANG 246
              +D                            A +LFD++ +R +V+WN MI+GY  N 
Sbjct: 228 EAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNK 287

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
              K L++F+ ML    + +  T++  +S  +   +L  GR VH++ +K+ F  +     
Sbjct: 288 QFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGT 347

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L++MYSKCG +  A+RVF  + ++ +  WTS+I G    G+ +  + LF  M R G++P
Sbjct: 348 LLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKP 407

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIK----ENDMQSSLYVSNALMDMYAKCGSMADA 422
                  +L+AC+  G  E   D H Y K    +  ++ S+     L+D+  + G + +A
Sbjct: 408 HAITFIGVLNACSHAGFAE---DAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEA 464

Query: 423 ESVFNQMPVK-DIVSWNTMIGA 443
           +    +MP+K + V W +++  
Sbjct: 465 KDTIERMPIKANKVIWTSLLSG 486



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 181/375 (48%), Gaps = 24/375 (6%)

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS--KCGDLDGAIRVFEKMGERSVVSW 336
           NCG       +HA ++K       S ++ LL +Y+  +  +L  A  +F+ + E ++VSW
Sbjct: 24  NCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSW 83

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
             +I  Y      + AI LF  ++ + + PD + +  +L  CA  G L+ GK +H  + +
Sbjct: 84  NLLIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARLGALQEGKQIHGLVLK 142

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAM 450
                  +V ++L+ MY+KCG +     VF++M  KD+VSWN++I      G ++L + M
Sbjct: 143 IGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEM 202

Query: 451 LQNF-EPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKCGV 508
            +   E D  +   ++   +    LE  R++   + +R+ +S      NA+++ Y+K G 
Sbjct: 203 FEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVS-----WNAMINGYMKAGD 257

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
              A+ LFD +P + L++W  MI GY  +     A+  F  M +  I P+  + +  + A
Sbjct: 258 SNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSA 317

Query: 569 CSHSGLVDEG---WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
              SG+V  G   W    +++     +  L     ++++ S+ G++  A R    +P   
Sbjct: 318 A--SGMVSLGTGRWVHSYIVKSGFKTDGVLG--TLLIEMYSKCGSVKSALRVFRSIP-KK 372

Query: 626 DATIWGSLLCGCRIH 640
               W S++ G  +H
Sbjct: 373 KLGHWTSVIVGLGMH 387



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 16/230 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSIL---QLCADLKSLEDGKKVHSI 121
            +N+ I  +       KA+++     +  I +  Y +IL      + + SL  G+ VHS 
Sbjct: 275 TWNSMITGYERNKQFTKALKLFEVMLREDI-SPNYTTILGAVSAASGMVSLGTGRWVHSY 333

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I +SG   D GVLG+ L+ M+  CG +K   RVF  I   K+  W  ++      G  ++
Sbjct: 334 IVKSGFKTD-GVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQ 392

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-----DRDVVSWN 236
           +L LF +M   G+   + TF  VL   +  G +   +DAH+ F  ++        +  + 
Sbjct: 393 TLELFDEMCRTGLKPHAITFIGVLNACSHAGFA---EDAHRYFKMMTYDYGIKPSIEHYG 449

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           C+I      G  E+  +  + M       +     ++LSG    G +  G
Sbjct: 450 CLIDVLCRAGHLEEAKDTIERM---PIKANKVIWTSLLSGSRKHGNIRMG 496


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/721 (35%), Positives = 393/721 (54%), Gaps = 43/721 (5%)

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           R+F  +       WN L++ Y++ G+ K+ L LF KM+        +T S VLK  A  G
Sbjct: 6   RLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTG 65

Query: 213 NSRR--------------------------------VKDAHKLFDELSDRDVVSWNCMIS 240
           + R                                 V DA K+F ++ + DVV+W+ MI+
Sbjct: 66  SLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMIT 125

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G    G  ++  E+F  M   G   +  T+ +++S   N G L +G+++H    K  F  
Sbjct: 126 GLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFES 185

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           +   +N L+ MY K   ++   +VFE M    +VSW ++++G+          R+F  M+
Sbjct: 186 DNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQML 245

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
            EG +P+++   S+L +C+     E GK VH +I +N      +V  AL+DMYAK   + 
Sbjct: 246 LEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLE 305

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACA 469
           DA   F+++  +DI SW  +I           A+  F  M  +  +P+  T+A  L  C+
Sbjct: 306 DAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCS 365

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            +A LE GR++H   ++ G   D  V +A+VD+Y KCG +  A ++F  + ++D++SW  
Sbjct: 366 HMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNT 425

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           +I+GY  HG G  A+  F  M   GI PDE +FI VL ACS  GLV+EG + F+ M    
Sbjct: 426 IISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIY 485

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            I P +EHYACMVD+L R G  +E   FIE M + P + IW ++L  C++H  V   EK 
Sbjct: 486 GINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKA 545

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           A+ +FE+EP     Y+LL+N++A   +W++V+ +R  ++ RG+KK PGCSW+E+ G+V++
Sbjct: 546 AKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHV 605

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F++   SHP  ++I + L +L   +   GY PKT   L N    EK   L  HSE+LA++
Sbjct: 606 FLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALS 665

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           F +L+  A + IR+ KNLR+C DCH+  K +S    +EIV+RD  RFHHFK G CSC+  
Sbjct: 666 FALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQDR 725

Query: 830 W 830
           W
Sbjct: 726 W 726



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 239/460 (51%), Gaps = 46/460 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  + ++G+ +K +++    ++  +K    T  ++L+ CA+  SL +GK +H++ 
Sbjct: 18  SWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALA 77

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG  ID+  LG  LV M+  CG + +  +VF KI N  V  W+ ++    + G+ +E+
Sbjct: 78  LRSGCEIDE-FLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEA 136

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGN----------------------------- 213
             LF  M+  G   + +T S ++     +G+                             
Sbjct: 137 AELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMM 196

Query: 214 ---SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
              SR V+D +K+F+ +++ D+VSWN ++SG+  +    +G  +F +ML  GF  ++ T 
Sbjct: 197 YMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTF 256

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           ++VL  C++     FG+ VHA  +K     +      L+DMY+K   L+ A   F+++  
Sbjct: 257 ISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVN 316

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R + SWT +I+GYA+    + A++ FR M REGI+P+ Y + S L  C+    LE G+ +
Sbjct: 317 RDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQL 376

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H    +      ++V +AL+D+Y KCG M  AE++F  +  +DIVSWNT+I         
Sbjct: 377 HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQG 436

Query: 443 --ALDLFVAML-QNFEPDGVTMACILPACASLAALERGRE 479
             AL+ F  ML +   PD  T   +L AC+ +  +E G++
Sbjct: 437 EKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK 476



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 225/440 (51%), Gaps = 25/440 (5%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A +LF  + +++ VSWN +++GY   G  +K L++F +M          T+ TVL GCAN
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
            G+L  G+ +HA AL++    +     +L+DMYSKCG +  A++VF K+    VV+W++M
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I G  ++G    A  LF  M R+G  P+ + ++S++      G L  G+ +H  I +   
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-----------GALDLFV 448
           +S   VSN L+ MY K   + D   VF  M   D+VSWN ++           G    + 
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243

Query: 449 AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
            +L+ F+P+  T   +L +C+SL   E G+++H +I+++    D  V  A+VDMY K   
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  A   FD +  +D+ SWT++I+GY        A+  F  M++ GI+P+E +  S L  
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHY------ACMVDLLSRTGNLSEAYRFIEMMP 622
           CSH   ++ G       R    +  K  H+      + +VDL  + G +  A    + + 
Sbjct: 364 CSHMATLENG-------RQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL- 415

Query: 623 VAPDATIWGSLLCGCRIHHE 642
           ++ D   W +++ G   H +
Sbjct: 416 ISRDIVSWNTIISGYSQHGQ 435



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 6/128 (4%)

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
           LA  LF  +P K+ +SW  ++ GY   G G   +  F  M++   +  + +  +VL  C+
Sbjct: 3   LAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCA 62

Query: 571 HSGLVDEGWRFFNM-MRYECNIEPKLEHYAC-MVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           ++G + EG     + +R  C I+   E   C +VD+ S+ G + +A +    +   PD  
Sbjct: 63  NTGSLREGKVLHALALRSGCEID---EFLGCSLVDMYSKCGTVYDALKVFTKIR-NPDVV 118

Query: 629 IWGSLLCG 636
            W +++ G
Sbjct: 119 AWSAMITG 126


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/718 (37%), Positives = 393/718 (54%), Gaps = 56/718 (7%)

Query: 163  VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA------------- 209
            V  WN  +  + + G   E++  F  M +  +A D  TF  +L  +A             
Sbjct: 871  VIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHG 930

Query: 210  -----------VVGN--------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
                        VGN        +  V  A  +F ++++ D+VSWN MISG   +G+ E 
Sbjct: 931  IVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEEC 990

Query: 251  GLEVFKEMLNLGFNVDLATMVTVLSGCANCGA-LMFGRAVHAFALKACFSKEISFNNTLL 309
             + +F ++L  G   D  T+ +VL  C++ G        +HA A+KA    +   + TL+
Sbjct: 991  SVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLI 1050

Query: 310  DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
            D+YSK G ++ A  +F       + SW +M+ GY   G F  A+RL+  M   G   +  
Sbjct: 1051 DVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERAN-- 1108

Query: 370  AITSILHACACDGL--LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
             IT    A A  GL  L+ GK +   + +      L+V + ++DMY KCG M  A  +FN
Sbjct: 1109 QITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFN 1168

Query: 428  QMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALER 476
            ++P  D V+W TMI           AL  +  M L   +PD  T A ++ AC+ L ALE+
Sbjct: 1169 EIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQ 1228

Query: 477  GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
            GR+IH   ++   + D  V  ++VDMY KCG +  AR LF       + SW  MI G   
Sbjct: 1229 GRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQ 1288

Query: 537  HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
            HG   +A+  F +M+  G+ PD V+FI VL ACSHSGLV E +  F  M+    IEP++E
Sbjct: 1289 HGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIE 1348

Query: 597  HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
            HY+C+VD LSR G + EA + I  MP    A+++ +LL  CR+  + +  ++VAE +  L
Sbjct: 1349 HYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLAL 1408

Query: 657  EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
            EP ++  YVLL+NVYA A +WE V   R  + +  +KK+PG SW+++K KV++FVAG  S
Sbjct: 1409 EPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRS 1468

Query: 717  HPHA----KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
            H        K+E ++KR+R     EGY P T +AL++ +E +KE +L  HSEKLA+A+G+
Sbjct: 1469 HEETDVIYNKVEYIMKRIR----EEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGL 1524

Query: 773  LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +  P   T+RV KNLRVCGDCH   K++SK   RE+VLRD+NRFHHF+ G CSC  +W
Sbjct: 1525 MKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 161/595 (27%), Positives = 302/595 (50%), Gaps = 28/595 (4%)

Query: 98   TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
            T   + ++C    S    + +H    + G+  D  V G+ LV ++   G ++E R +F+ 
Sbjct: 729  TLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGA-LVNIYAKFGRIREARVLFDG 787

Query: 158  IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS--- 214
            +    V +WN++M  Y  TG   E+L LF +    G+  D  T   + + +    N    
Sbjct: 788  MGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEW 847

Query: 215  --RRVKD-AHKLF---DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
              +++K    KLF   D+    DV++WN  +S ++  G   + ++ F +M+N     D  
Sbjct: 848  QLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGL 907

Query: 269  TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            T V +LS  A    L  G+ +H   +++   + +S  N L++MY K G +  A  VF +M
Sbjct: 908  TFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQM 967

Query: 329  GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC-DGLLEIG 387
             E  +VSW +MI+G A  G+ + ++ +F  ++R G+ PD + + S+L AC+   G   + 
Sbjct: 968  NEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLA 1027

Query: 388  KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
              +H    +  +    +VS  L+D+Y+K G M +AE +F      D+ SWN M+      
Sbjct: 1028 TQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVS 1087

Query: 442  ----GALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                 AL L++ M ++ E  + +T+A    A   L  L++G++I   +++ G + D  V 
Sbjct: 1088 GDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVI 1147

Query: 497  NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
            + ++DMY+KCG +  AR +F+ IP+ D ++WT MI+G   +G    A+ T++ MR + ++
Sbjct: 1148 SGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQ 1207

Query: 557  PDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
            PDE +F +++ ACS    +++G +   N ++  C  +P +     +VD+ ++ GN+ +A 
Sbjct: 1208 PDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFV--MTSLVDMYAKCGNIEDAR 1265

Query: 616  RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
               +    +  A+ W +++ G   H   + A +  E +    + PD   +  +L+
Sbjct: 1266 GLFKRTNTSRIAS-WNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLS 1319



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 229/505 (45%), Gaps = 54/505 (10%)

Query: 66   YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
            +N  +  F + G   +A++       S++  D  T+  +L + A L  LE GK++H I+ 
Sbjct: 874  WNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVV 933

Query: 124  ESGIVIDDGV--LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             SG+   D V  +G+ L+ M+V  G +   R VF +++   +  WN ++   + +G  + 
Sbjct: 934  RSGL---DQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEEC 990

Query: 182  SLYLFKKMQSLGIAADSYTFSCVLKCLAVVG----------------------------- 212
            S+ +F  +   G+  D +T + VL+  + +G                             
Sbjct: 991  SVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLI 1050

Query: 213  ----NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                 S ++++A  LF      D+ SWN M+ GYI +G   K L ++  M   G   +  
Sbjct: 1051 DVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQI 1110

Query: 269  TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            T+            L  G+ + A  +K  F+ ++   + +LDMY KCG+++ A R+F ++
Sbjct: 1111 TLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEI 1170

Query: 329  GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                 V+WT+MI+G    G  + A+  +  M    ++PD Y   +++ AC+    LE G+
Sbjct: 1171 PSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGR 1230

Query: 389  DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------- 441
             +H    + +     +V  +L+DMYAKCG++ DA  +F +     I SWN MI       
Sbjct: 1231 QIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHG 1290

Query: 442  ---GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR--HGISADRNV 495
                AL  F  M  +   PD VT   +L AC+    +    E + Y ++  +GI  +   
Sbjct: 1291 NAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYE-NFYSMQKIYGIEPEIEH 1349

Query: 496  ANAIVDMYVKCGVLVLARSLFDMIP 520
             + +VD   + G +  A  +   +P
Sbjct: 1350 YSCLVDALSRAGRIREAEKVISSMP 1374



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 198/437 (45%), Gaps = 47/437 (10%)

Query: 217  VKDAHKLFDELSD--RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
            +  A KLFD   D  RD+V+WN ++S +     A  G  +F+ +     +    T+  V 
Sbjct: 677  LSSARKLFDTTPDTSRDLVTWNAILSAHADK--ARDGFHLFRLLRRSFVSATRHTLAPVF 734

Query: 275  SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
              C    +     ++H +A+K     ++     L+++Y+K G +  A  +F+ MG R VV
Sbjct: 735  KMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVV 794

Query: 335  SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
             W  M+  Y   G+   A+ LF    R G+ PD   + +         L  + K   + +
Sbjct: 795  LWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCT---------LARVVKSKQNVL 845

Query: 395  KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
            +    Q   Y +   M      GS              D+++WN  +           A+
Sbjct: 846  EWQLKQLKAYGTKLFMYDDDDDGS--------------DVIAWNKTLSWFLQRGETWEAV 891

Query: 445  DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            D FV M+ +    DG+T   +L   A L  LE G++IHG ++R G+    +V N +++MY
Sbjct: 892  DCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMY 951

Query: 504  VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            VK G +  AR++F  +   DL+SW  MI+G  + G    ++  F D+ + G+ PD+ +  
Sbjct: 952  VKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVA 1011

Query: 564  SVLYACSHSGLVDEGWRFFNMMRYECNIEPK--LEHY--ACMVDLLSRTGNLSEAYRFIE 619
            SVL ACS  G    G        + C ++    L+ +    ++D+ S++G + EA  F+ 
Sbjct: 1012 SVLRACSSLG----GGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA-EFLF 1066

Query: 620  MMPVAPDATIWGSLLCG 636
            +     D   W +++ G
Sbjct: 1067 VNQDGFDLASWNAMMHG 1083



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 11/204 (5%)

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-- 430
           SIL        L +GK  H  I  +      +++N L+ MY+KCGS++ A  +F+  P  
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690

Query: 431 VKDIVSWNTMIGA--------LDLFVAMLQNF-EPDGVTMACILPACASLAALERGREIH 481
            +D+V+WN ++ A          LF  + ++F      T+A +   C   A+      +H
Sbjct: 691 SRDLVTWNAILSAHADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLH 750

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
           GY ++ G+  D  VA A+V++Y K G +  AR LFD +  +D++ W +M+  Y   G   
Sbjct: 751 GYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEY 810

Query: 542 DAIATFNDMRQAGIEPDEVSFISV 565
           +A+  F++  + G+ PD+V+  ++
Sbjct: 811 EALLLFSEFNRTGLRPDDVTLCTL 834



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 83/382 (21%), Positives = 165/382 (43%), Gaps = 42/382 (10%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE- 330
           ++L        L  G+  HA  L +    +    N L+ MYSKCG L  A ++F+   + 
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690

Query: 331 -RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            R +V+W ++++ +A +   DG   LFR + R  +    + +  +   C         + 
Sbjct: 691 SRDLVTWNAILSAHA-DKARDG-FHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAES 748

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H Y  +  +Q  ++V+ AL+++YAK G + +A  +F+ M ++D+V WN M+        
Sbjct: 749 LHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGL 808

Query: 443 ---ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              AL LF    +    PD VT+ C L                       + + +NV   
Sbjct: 809 EYEALLLFSEFNRTGLRPDDVTL-CTLARV--------------------VKSKQNVLEW 847

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
            +      G  +            D+I+W   ++ +   G   +A+  F DM  + +  D
Sbjct: 848 QLKQLKAYGTKLFMYDD--DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACD 905

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-F 617
            ++F+ +L   +    ++ G +   ++     ++  +    C++++  +TG++S A   F
Sbjct: 906 GLTFVVMLSVVAGLNCLELGKQIHGIV-VRSGLDQVVSVGNCLINMYVKTGSVSRARTVF 964

Query: 618 IEMMPVAPDATIWGSLLCGCRI 639
            +M  V  D   W +++ GC +
Sbjct: 965 WQMNEV--DLVSWNTMISGCAL 984



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 105/210 (50%), Gaps = 14/210 (6%)

Query: 75   EVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG 132
            E G  E A+   +    SK+  D  T+ ++++ C+ L +LE G+++H+   +     D  
Sbjct: 1187 ENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPF 1246

Query: 133  VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
            V+ S LV M+  CG++++ R +F + +  ++  WN ++   ++ GN +E+L  F++M+S 
Sbjct: 1247 VMTS-LVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSR 1305

Query: 193  GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-----DRDVVSWNCMISGYIANGV 247
            G+  D  TF   +  L+   +S  V +A++ F  +      + ++  ++C++      G 
Sbjct: 1306 GVTPDRVTF---IGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGR 1362

Query: 248  AEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
              +  +V   M    F    +   T+L+ C
Sbjct: 1363 IREAEKVISSM---PFEASASMYRTLLNAC 1389


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/757 (34%), Positives = 398/757 (52%), Gaps = 86/757 (11%)

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
           + R +F K+    +  W +++  Y +  N  ++  +F KM   G+  D   F+  L  + 
Sbjct: 176 DARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVK 235

Query: 210 VVGN-----SRRV----------------------------KDAHKLFDELSDRDVVSWN 236
            +GN     S RV                              A K F+ + +R+  +W+
Sbjct: 236 GLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWS 295

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MI+     G  +  + V++          +A    +++G A CG     R   A  L  
Sbjct: 296 TMIAALSHGGRIDAAIAVYER----DPVKSIACRTALITGLAQCG-----RIDDARILFE 346

Query: 297 CFSKEISFN-NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
              + I  + N L+  Y + G ++ A  +F+KM  R+ +SW  MIAGYA+ G  + A+ L
Sbjct: 347 QIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGL 406

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
            + + R G+ P + ++TSI  AC+    LE G  VH    +   Q + +  NAL+ MY K
Sbjct: 407 LQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGK 466

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNFE----------------- 455
           C +M  A  VF++M  KDIVSWN+ + AL   DL       F+                 
Sbjct: 467 CRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAY 526

Query: 456 ----------------------PDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                                 P+   +  +L  C SL A + G++IH   ++ G+ ++ 
Sbjct: 527 AHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSEL 586

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            VANA++ MY KCG    +R +FD++  +D+ +W  +I GY  HG G +AI  +  M  A
Sbjct: 587 IVANALISMYFKCGC-ADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESA 645

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G+ P+EV+F+ +L ACSH+GLVDEGW+FF  M  +  + P  EHYACMVDLL RTG++  
Sbjct: 646 GVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQG 705

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A +FI  MP+ PD  IW +LL  C+IH   ++ ++ AE +F +EP N G YV+L+N+Y+ 
Sbjct: 706 AEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSS 765

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
              W EV ++R+ + ++G+ K PGCSW +IK K++ FV G   H   ++I + L+ L   
Sbjct: 766 LGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTL 825

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           +K  GY P T + L + DE +KE +L  HSEKLA+A+ +L  P G  I++ KNLR+CGDC
Sbjct: 826 LKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDC 885

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H   KF+S   +R+I +RD NRFHHF++G CSC  FW
Sbjct: 886 HTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 228/464 (49%), Gaps = 33/464 (7%)

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
           G+ L+  +   G + E RRVF+ +       WN ++  Y + G+   +  LF  M S  +
Sbjct: 99  GAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDV 158

Query: 195 AADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
           ++ +   +     L +V       DA  LF+++ +R++VSW  MISGY       K  ++
Sbjct: 159 SSWNSMLTGYCHSLQMV-------DARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDI 211

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
           F +M   G   D +   + LS     G L    ++   ALK  F +++     +L++YS+
Sbjct: 212 FCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271

Query: 315 -CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
               LD AI+ FE M ER+  +W++MIA  +  G  D AI ++    R+ ++  +   T+
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYE---RDPVK-SIACRTA 327

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVS-NALMDMYAKCGSMADAESVFNQMPVK 432
           ++   A  G ++  + + + I E      + VS NAL+  Y + G + +A+ +F++MP +
Sbjct: 328 LITGLAQCGRIDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPFR 382

Query: 433 DIVSWNTMI------GALDLFVAMLQNFEPDGV-----TMACILPACASLAALERGREIH 481
           + +SW  MI      G  +  + +LQ     G+     ++  I  AC+++ ALE G ++H
Sbjct: 383 NTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH 442

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
              ++ G   +    NA++ MY KC  +  AR +F  +  KD++SW   +A    +    
Sbjct: 443 SLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLD 502

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           +A  TF++M    +  D+VS+ +++ A +H+   +E    F  M
Sbjct: 503 EARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 239/504 (47%), Gaps = 48/504 (9%)

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
           +G   RV +A ++FD +  RD+++WN MIS Y  NG+ +   +++ + ++ G   ++ T 
Sbjct: 44  LGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY-DAISGG---NMRTG 99

Query: 271 VTVLSGCANCGALMFGR----------AVHAFALKACF-----------------SKEIS 303
             +LSG    G ++  R           V   A+ +C+                 S+++S
Sbjct: 100 AILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVS 159

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N++L  Y     +  A  +FEKM ER++VSWT MI+GY R      A  +F  M REG
Sbjct: 160 SWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREG 219

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD-A 422
           + PD     S L A    G L++ + +     +   +  + +  A++++Y++  S+ D A
Sbjct: 220 LLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTA 279

Query: 423 ESVFNQMPVKDIVSWNTMIGALD---LFVAMLQNFEPDGV-TMACILPACASLAALERGR 478
              F  M  ++  +W+TMI AL       A +  +E D V ++AC       LA  + GR
Sbjct: 280 IKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLA--QCGR 337

Query: 479 EIHGYILRHGISADRNVA-NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
                IL   I     V+ NA++  Y++ G++  A+ LFD +P ++ ISW  MIAGY  +
Sbjct: 338 IDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQN 397

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G   +A+    ++ ++G+ P   S  S+ +ACS+   ++ G +  ++      +  +   
Sbjct: 398 GRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSL---AVKVGCQFNS 454

Query: 598 YAC--MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           +AC  ++ +  +  N+  A +    M V  D   W S L     +  +  A    +++  
Sbjct: 455 FACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQNDLLDEARNTFDNM-- 511

Query: 656 LEPDNTGYYVLLANVYAEAEKWEE 679
           L  D+  +  +++  YA AE+  E
Sbjct: 512 LSRDDVSWTTIIS-AYAHAEQSNE 534



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 121/551 (21%), Positives = 234/551 (42%), Gaps = 87/551 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++   I  +  + N  KA ++     +  +  D   + S L     L +L+  + +  + 
Sbjct: 191 SWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLA 250

Query: 123 CESGIVIDDGVLGSKLVFMFV-TCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            ++G    D V+G+ ++ ++      L    + F  +     + W+ ++   S  G    
Sbjct: 251 LKTGFE-RDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDA 309

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
           ++ ++++     IA  +   + + +C        R+ DA  LF+++ +  VVSWN +I+G
Sbjct: 310 AIAVYERDPVKSIACRTALITGLAQC-------GRIDDARILFEQIPEPIVVSWNALITG 362

Query: 242 YIANGV-------------------------------AEKGLEVFKEMLNLGFNVDLATM 270
           Y+ NG+                               +E+ L + +E+   G    L+++
Sbjct: 363 YMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSL 422

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++   C+N  AL  G  VH+ A+K          N L+ MY KC +++ A +VF +M  
Sbjct: 423 TSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVT 482

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMV-REGIE------------------------ 365
           + +VSW S +A   +  + D A   F  M+ R+ +                         
Sbjct: 483 KDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542

Query: 366 ------PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
                 P+   +T +L  C   G  +IG+ +H    +  M S L V+NAL+ MY KCG  
Sbjct: 543 FCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC- 601

Query: 420 ADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNFE-----PDGVTMACILPAC 468
           AD+  +F+ M  +DI +WNT+I      G     + M Q+ E     P+ VT   +L AC
Sbjct: 602 ADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNAC 661

Query: 469 ASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARS-LFDMIPAKDLIS 526
           +    ++ G +    + + +G++        +VD+  + G +  A   ++DM    D + 
Sbjct: 662 SHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVI 721

Query: 527 WTIMIAGYGMH 537
           W+ ++    +H
Sbjct: 722 WSALLGACKIH 732



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 186/419 (44%), Gaps = 51/419 (12%)

Query: 35  PIIVSSKS-----HSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSS 89
           PI+VS  +       +  +N       K     T ++   I  + + G  E+A+ +L   
Sbjct: 351 PIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQEL 410

Query: 90  EKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
            +S +     +  SI   C+++ +LE G +VHS+  + G   +     + L+ M+  C +
Sbjct: 411 HRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNA-LITMYGKCRN 469

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           ++  R+VF+++    +  WN                                        
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSF-------------------------------------- 491

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           LA +  +  + +A   FD +  RD VSW  +IS Y     + + +  FK M      +  
Sbjct: 492 LAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMF-CEHELPN 550

Query: 268 ATMVTVLSG-CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
           + ++T+L G C + GA   G+ +H  A+K     E+   N L+ MY KCG  D   R+F+
Sbjct: 551 SPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSR-RIFD 609

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
            M ER + +W ++I GYA+ G+   AI++++ M   G+ P+      +L+AC+  GL++ 
Sbjct: 610 LMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDE 669

Query: 387 GKDVHDYIKENDMQSSLYVSNALM-DMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           G      + ++   + L    A M D+  + G +  AE     MP++ D V W+ ++GA
Sbjct: 670 GWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGA 728


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/812 (32%), Positives = 429/812 (52%), Gaps = 48/812 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSII 122
           ++ A +  + + G  E+A+ +     +S +    Y   SIL  C   +  + G+ +H  +
Sbjct: 110 SWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQV 169

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G    +  +G+ L+ +++ C   +   RVF  +       +N L+  +++ G+   +
Sbjct: 170 YKQGF-FSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRA 228

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH--------------------- 221
           L +F +MQ  G++ DS T + +L   + VG+ R+ K  H                     
Sbjct: 229 LGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDL 288

Query: 222 -----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                      ++FD     +VV WN M+  Y       K  ++F  ML  G   +  T 
Sbjct: 289 YVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTY 348

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             +L  C + G +  G  +H+  +K  F  ++  +  L+DMYSK G LD A R+ + + E
Sbjct: 349 PCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEE 408

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVSWTSMIAGY +      A+  F+ M   GI PD   + S + ACA    +  G  +
Sbjct: 409 KDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQI 468

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  +  +   + + + N L+ +YA+CG   +A S F  +  K+ ++WN +I         
Sbjct: 469 HARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLY 528

Query: 443 --ALDLFVAMLQNFEPDGV-TMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL +F+ M Q      V T    + A A+LA +++G++IH  +++ G +++  ++NA+
Sbjct: 529 EEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNAL 588

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + +Y KCG +  A+  F  +  ++ +SW  +I     HG G +A+  F+ M+Q G++P +
Sbjct: 589 ISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSD 648

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+F+ VL ACSH GLV+EG  +F  M  E  I P+ +HYAC+VD+L R G L  A RF+E
Sbjct: 649 VTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVE 708

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP+  D+ +W +LL  C++H  +++ E  A+H+ ELEP ++  YVLL+N YA   KW  
Sbjct: 709 EMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWAS 768

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
             ++R+ +  RG++K PG SWIE+K  V+ F  G   HP A +I + L  L   + + GY
Sbjct: 769 RDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGY 828

Query: 740 FPKTRYALINADEME-KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
             +  Y L +  E E K+     HSEKLA+AFG+++LP+   +RV KNLRVC DCH   K
Sbjct: 829 -KQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMK 887

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           F S    REIVLRD  RFHHF +G CSC  +W
Sbjct: 888 FTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/552 (25%), Positives = 268/552 (48%), Gaps = 47/552 (8%)

Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
           ++G+ L+ ++   G ++  RRVF ++       W  ++  Y++ G  +E++ L+++M   
Sbjct: 78  IIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRS 137

Query: 193 GIAADSYTFSCVLKCL------------------------AVVGNS--------RRVKDA 220
           G+    Y  S +L                             VGN+        R  + A
Sbjct: 138 GVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLA 197

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
            ++F ++   D V++N +ISG+   G  ++ L +F EM   G + D  T+ ++L+ C+  
Sbjct: 198 DRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAV 257

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
           G L  G+ +H++ LKA  S +     +LLD+Y K GD++ A+++F+     +VV W  M+
Sbjct: 258 GDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLML 317

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
             Y +      +  +F  M+  G+ P+ +    +L  C   G + +G+ +H    +N  Q
Sbjct: 318 VAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQ 377

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM 450
           S +YVS  L+DMY+K G +  A+ + + +  KD+VSW +MI           AL+ F  M
Sbjct: 378 SDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEM 437

Query: 451 LQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
                 PD + +A  + ACA + A+ +G +IH  +   G SAD ++ N +V +Y +CG+ 
Sbjct: 438 QACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGIS 497

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             A S F+ I  K+ I+W  +I+G+   G   +A+  F  M QAG + +  +F+S + A 
Sbjct: 498 KEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISAS 557

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA-YRFIEMMPVAPDAT 628
           ++   + +G +  +    +     + E    ++ L  + G++ +A   F EM     +  
Sbjct: 558 ANLADIKQG-KQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEM--TKRNEV 614

Query: 629 IWGSLLCGCRIH 640
            W +++  C  H
Sbjct: 615 SWNTIITCCSQH 626



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 263/526 (50%), Gaps = 48/526 (9%)

Query: 59  LVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGK 116
           L C +  +N  I    + G+ ++A+ +    + S +  D+ T  S+L  C+ +  L  GK
Sbjct: 205 LYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGK 264

Query: 117 KVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
           ++HS + ++G+ +D  + GS L+ ++V  GD++E  ++F+  D   V +WNL++  Y + 
Sbjct: 265 QLHSYLLKAGMSLDYIMEGS-LLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQI 323

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG--------NSRRVKD--------- 219
            +  +S  +F +M + G+  + +T+ C+L+     G        +S  +K+         
Sbjct: 324 DDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVS 383

Query: 220 ---------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                          A ++ D + ++DVVSW  MI+GY+ +   ++ LE FKEM   G  
Sbjct: 384 GVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIW 443

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D   + + +S CA   A+  G  +HA    + +S ++S  N L+ +Y++CG    A   
Sbjct: 444 PDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSS 503

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           FE +  +  ++W  +I+G+A+ G+++ A+++F  M + G + +V+   S + A A    +
Sbjct: 504 FEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADI 563

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
           + GK +H  + +    S   +SNAL+ +Y KCGS+ DA+  F +M  ++ VSWNT+I   
Sbjct: 564 KQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCC 623

Query: 443 --------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGR-EIHGYILRHGISAD 492
                   ALDLF  M  Q  +P  VT   +L AC+ +  +E G          HGI   
Sbjct: 624 SQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPR 683

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
            +    +VD+  + G L  A+   + +P   D + W  +++   +H
Sbjct: 684 PDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVH 729



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 238/456 (52%), Gaps = 28/456 (6%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVF----KEMLNLGFNVDLATMVTVLSGCANCGA 282
           ++ R   S+N  ++G++A    EK L +F    ++ + LG  VD A  +    G      
Sbjct: 1   MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLG-AVDFACALRACRGSGRRWP 59

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L+    +HA A+    S      N L+D+Y+K G +  A RVFE++  R  VSW ++++G
Sbjct: 60  LV--PEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSG 117

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           YA+ G+ + A+RL+R M R G+ P  Y ++SIL AC    L ++G+ +H  + +    S 
Sbjct: 118 YAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSE 177

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-L 451
            +V NAL+ +Y +C S   A+ VF  M   D V++NT+I           AL +F  M L
Sbjct: 178 TFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQL 237

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
               PD VT+A +L AC+++  L +G+++H Y+L+ G+S D  +  +++D+YVK G +  
Sbjct: 238 SGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEE 297

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A  +FD     +++ W +M+  YG       +   F  M  AG+ P++ ++  +L  C+H
Sbjct: 298 ALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTH 357

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           +G +  G +  ++   +   +  +     ++D+ S+ G L +A R ++M+    D   W 
Sbjct: 358 TGEIGLGEQIHSLT-IKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIE-EKDVVSWT 415

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELE-----PDNTG 662
           S++ G  + HE    ++  E   E++     PDN G
Sbjct: 416 SMIAG-YVQHE--FCKEALETFKEMQACGIWPDNIG 448


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/757 (34%), Positives = 398/757 (52%), Gaps = 86/757 (11%)

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
           + R +F K+    +  W +++  Y +  N  ++  +F KM   G+  D   F+  L  + 
Sbjct: 176 DARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVK 235

Query: 210 VVGN-----SRRV----------------------------KDAHKLFDELSDRDVVSWN 236
            +GN     S RV                              A K F+ + +R+  +W+
Sbjct: 236 GLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWS 295

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MI+     G  +  + V++          +A    +++G A CG     R   A  L  
Sbjct: 296 TMIAALSHGGRIDAAIAVYER----DPVKSIACRTALITGLAQCG-----RIDDARILFE 346

Query: 297 CFSKEISFN-NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
              + I  + N L+  Y + G ++ A  +F+KM  R+ +SW  MIAGYA+ G  + A+ L
Sbjct: 347 QIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGL 406

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
            + + R G+ P + ++TSI  AC+    LE G  VH    +   Q + +  NAL+ MY K
Sbjct: 407 LQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGK 466

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNFE----------------- 455
           C +M  A  VF++M  KDIVSWN+ + AL   DL       F+                 
Sbjct: 467 CRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAY 526

Query: 456 ----------------------PDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                                 P+   +  +L  C SL A + G++IH   ++ G+ ++ 
Sbjct: 527 AHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSEL 586

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            VANA++ MY KCG    +R +FD++  +D+ +W  +I GY  HG G +AI  +  M  A
Sbjct: 587 IVANALISMYFKCGC-ADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESA 645

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G+ P+EV+F+ +L ACSH+GLVDEGW+FF  M  +  + P  EHYACMVDLL RTG++  
Sbjct: 646 GVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQG 705

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A +FI  MP+ PD  IW +LL  C+IH   ++ ++ AE +F +EP N G YV+L+N+Y+ 
Sbjct: 706 AEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSS 765

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
              W EV ++R+ + ++G+ K PGCSW +IK K++ FV G   H   ++I + L+ L   
Sbjct: 766 LGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTL 825

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           +K  GY P T + L + DE +KE +L  HSEKLA+A+ +L  P G  I++ KNLR+CGDC
Sbjct: 826 LKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDC 885

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H   KF+S   +R+I +RD NRFHHF++G CSC  FW
Sbjct: 886 HTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 228/464 (49%), Gaps = 33/464 (7%)

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
           G+ L+  +   G + E RRVF+ +       WN ++  Y + G+   +  LF  M S  +
Sbjct: 99  GAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDV 158

Query: 195 AADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
           ++ +   +     L +V       DA  LF+++ +R++VSW  MISGY       K  ++
Sbjct: 159 SSWNSMLTGYCHSLQMV-------DARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDI 211

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
           F +M   G   D +   + LS     G L    ++   ALK  F +++     +L++YS+
Sbjct: 212 FCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271

Query: 315 -CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
               LD AI+ FE M ER+  +W++MIA  +  G  D AI ++    R+ ++  +   T+
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYE---RDPVK-SIACRTA 327

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVS-NALMDMYAKCGSMADAESVFNQMPVK 432
           ++   A  G ++  + + + I E      + VS NAL+  Y + G + +A+ +F++MP +
Sbjct: 328 LITGLAQCGRIDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPFR 382

Query: 433 DIVSWNTMI------GALDLFVAMLQNFEPDGV-----TMACILPACASLAALERGREIH 481
           + +SW  MI      G  +  + +LQ     G+     ++  I  AC+++ ALE G ++H
Sbjct: 383 NTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH 442

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
              ++ G   +    NA++ MY KC  +  AR +F  +  KD++SW   +A    +    
Sbjct: 443 SLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLD 502

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           +A  TF++M    +  D+VS+ +++ A +H+   +E    F  M
Sbjct: 503 EARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 239/504 (47%), Gaps = 48/504 (9%)

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
           +G   RV +A ++FD +  RD+++WN MIS Y  NG+ +   +++ + ++ G   ++ T 
Sbjct: 44  LGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY-DAISGG---NMRTG 99

Query: 271 VTVLSGCANCGALMFGR----------AVHAFALKACF-----------------SKEIS 303
             +LSG    G ++  R           V   A+ +C+                 S+++S
Sbjct: 100 AILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVS 159

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N++L  Y     +  A  +FEKM ER++VSWT MI+GY R      A  +F  M REG
Sbjct: 160 SWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREG 219

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD-A 422
           + PD     S L A    G L++ + +     +   +  + +  A++++Y++  S+ D A
Sbjct: 220 LLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTA 279

Query: 423 ESVFNQMPVKDIVSWNTMIGALD---LFVAMLQNFEPDGV-TMACILPACASLAALERGR 478
              F  M  ++  +W+TMI AL       A +  +E D V ++AC       LA  + GR
Sbjct: 280 IKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLA--QCGR 337

Query: 479 EIHGYILRHGISADRNVA-NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
                IL   I     V+ NA++  Y++ G++  A+ LFD +P ++ ISW  MIAGY  +
Sbjct: 338 IDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQN 397

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G   +A+    ++ ++G+ P   S  S+ +ACS+   ++ G +  ++      +  +   
Sbjct: 398 GRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSL---AVKVGCQFNS 454

Query: 598 YAC--MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           +AC  ++ +  +  N+  A +    M V  D   W S L     +  +  A    +++  
Sbjct: 455 FACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQNDLLDEARNTFDNM-- 511

Query: 656 LEPDNTGYYVLLANVYAEAEKWEE 679
           L  D+  +  +++  YA AE+  E
Sbjct: 512 LSRDDVSWTTIIS-AYAHAEQSNE 534



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 121/551 (21%), Positives = 234/551 (42%), Gaps = 87/551 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++   I  +  + N  KA ++     +  +  D   + S L     L +L+  + +  + 
Sbjct: 191 SWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLA 250

Query: 123 CESGIVIDDGVLGSKLVFMFV-TCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            ++G    D V+G+ ++ ++      L    + F  +     + W+ ++   S  G    
Sbjct: 251 LKTGFE-RDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDA 309

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
           ++ ++++     IA  +   + + +C        R+ DA  LF+++ +  VVSWN +I+G
Sbjct: 310 AIAVYERDPVKSIACRTALITGLAQC-------GRIDDARILFEQIPEPIVVSWNALITG 362

Query: 242 YIANGV-------------------------------AEKGLEVFKEMLNLGFNVDLATM 270
           Y+ NG+                               +E+ L + +E+   G    L+++
Sbjct: 363 YMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSL 422

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++   C+N  AL  G  VH+ A+K          N L+ MY KC +++ A +VF +M  
Sbjct: 423 TSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVT 482

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMV-REGIE------------------------ 365
           + +VSW S +A   +  + D A   F  M+ R+ +                         
Sbjct: 483 KDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542

Query: 366 ------PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
                 P+   +T +L  C   G  +IG+ +H    +  M S L V+NAL+ MY KCG  
Sbjct: 543 FCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC- 601

Query: 420 ADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNFE-----PDGVTMACILPAC 468
           AD+  +F+ M  +DI +WNT+I      G     + M Q+ E     P+ VT   +L AC
Sbjct: 602 ADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNAC 661

Query: 469 ASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARS-LFDMIPAKDLIS 526
           +    ++ G +    + + +G++        +VD+  + G +  A   ++DM    D + 
Sbjct: 662 SHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVI 721

Query: 527 WTIMIAGYGMH 537
           W+ ++    +H
Sbjct: 722 WSALLGACKIH 732



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 186/419 (44%), Gaps = 51/419 (12%)

Query: 35  PIIVSSKS-----HSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSS 89
           PI+VS  +       +  +N       K     T ++   I  + + G  E+A+ +L   
Sbjct: 351 PIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQEL 410

Query: 90  EKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
            +S +     +  SI   C+++ +LE G +VHS+  + G   +     + L+ M+  C +
Sbjct: 411 HRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNA-LITMYGKCRN 469

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           ++  R+VF+++    +  WN                                        
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSF-------------------------------------- 491

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           LA +  +  + +A   FD +  RD VSW  +IS Y     + + +  FK M      +  
Sbjct: 492 LAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMF-CEHELPN 550

Query: 268 ATMVTVLSG-CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
           + ++T+L G C + GA   G+ +H  A+K     E+   N L+ MY KCG  D   R+F+
Sbjct: 551 SPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSR-RIFD 609

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
            M ER + +W ++I GYA+ G+   AI++++ M   G+ P+      +L+AC+  GL++ 
Sbjct: 610 LMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDE 669

Query: 387 GKDVHDYIKENDMQSSLYVSNALM-DMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           G      + ++   + L    A M D+  + G +  AE     MP++ D V W+ ++GA
Sbjct: 670 GWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGA 728


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/629 (38%), Positives = 367/629 (58%), Gaps = 21/629 (3%)

Query: 223 LFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           LF+   D+ DV SWN +I+    +G + + L  F  M  L      ++    +  C++  
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            +  G+  H  A    +  +I  ++ L+ MYS CG L+ A +VF+++ +R++VSWTSMI 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDV------YAITSILHACACDGLLEIGKDVHDYIK 395
           GY   G    A+ LF+ ++ E  + D         + S++ AC+      + + +H ++ 
Sbjct: 151 GYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVI 210

Query: 396 ENDMQSSLYVSNALMDMYAKCGS--MADAESVFNQMPVKDIVSWNTMIG----------A 443
           +      + V N L+D YAK G   +A A  +F+Q+  KD VS+N+++           A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 444 LDLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
            D+F  +++      + +T++ +L A +   AL  G+ IH  ++R G+  D  V  +I+D
Sbjct: 271 FDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KCG +  AR  FD +  K++ SWT MIAGYGMHG    A+  F  M  +G+ P+ ++
Sbjct: 331 MYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           F+SVL ACSH+GL D GW +FN M+    +EP LEHY CMVDLL R G L +AY  I+ M
Sbjct: 391 FVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKM 450

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
            + PD+ IW SLL  CRIH  V+LAE     +FEL+P N GYY+LL+++YA++ +W++V+
Sbjct: 451 KMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVE 510

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           ++R  +  RGL K PG S +E+ G+V++F+ G   HP  +KI   L  L  ++   GY  
Sbjct: 511 RVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            T     + DE EKE+ L  HSEKLA+AFGI+N   G T+ V KNLRVC DCH + K +S
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K   RE V+RD+ RFHHFKDG CSC  +W
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 217/440 (49%), Gaps = 57/440 (12%)

Query: 154 VFNK-IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----- 207
           +FN+ +D   VF WN ++ + +++G+  E+L  F  M+ L +     +F C +K      
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90

Query: 208 ---------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                      + +     +++DA K+FDE+  R++VSW  MI 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLAT-------MVTVLSGCANCGALMFGRAVHAFA 293
           GY  NG A   + +FK++L +  N D AT       MV+V+S C+   A     ++H+F 
Sbjct: 151 GYDLNGNALDAVSLFKDLL-IEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFV 209

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAI--RVFEKMGERSVVSWTSMIAGYAREGVFDG 351
           +K  F + +S  NTLLD Y+K G+   A+  ++F+++ ++  VS+ S+++ YA+ G+ + 
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 352 AIRLFRGMVREGIEP-DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
           A  +FR +++E +   +   ++++L A +  G L IGK +HD +    ++  + V  +++
Sbjct: 270 AFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGV 459
           DMY KCG +  A   F++M  K++ SW  MI           AL+LF AM+ +   P+ +
Sbjct: 330 DMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389

Query: 460 TMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD- 517
           T   +L AC+     + G    +    R G+         +VD+  + G L  A  L   
Sbjct: 390 TFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQK 449

Query: 518 MIPAKDLISWTIMIAGYGMH 537
           M    D I W+ ++A   +H
Sbjct: 450 MKMEPDSIIWSSLLAACRIH 469



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 197/426 (46%), Gaps = 50/426 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I      G+  +A+    S  K  +     ++   ++ C+ L  +  GK+ H   
Sbjct: 43  SWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQA 102

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G    D  + S L+ M+ TCG L++ R+VF++I    +  W  ++  Y   GN  ++
Sbjct: 103 FVFGYQ-SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDA 161

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD----------------------- 219
           + LFK +       D+  F   +  ++V+    RV                         
Sbjct: 162 VSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVG 221

Query: 220 -----------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN-- 260
                            A K+FD++ D+D VS+N ++S Y  +G++ +  +VF+ ++   
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEK 281

Query: 261 -LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
            + FN    T+ TVL   ++ GAL  G+ +H   ++     ++    +++DMY KCG ++
Sbjct: 282 VVTFNC--ITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A   F++M  ++V SWT+MIAGY   G    A+ LF  M+  G+ P+     S+L AC+
Sbjct: 340 TARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399

Query: 380 CDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSW 437
             GL ++G    + +K    ++  L     ++D+  + G +  A  +  +M ++ D + W
Sbjct: 400 HAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIW 459

Query: 438 NTMIGA 443
           ++++ A
Sbjct: 460 SSLLAA 465


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/563 (42%), Positives = 352/563 (62%), Gaps = 13/563 (2%)

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
           CG L+ G+ +H   LK  F  ++    +L+ MYS+ G +  A ++F+ M  R   SW +M
Sbjct: 7   CGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAM 66

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I+GY + G    A+ +   M  EG++ D   + S+L  CA  G +  GK +H Y+ ++ +
Sbjct: 67  ISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGL 126

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
           +  L+VSNAL++MYAK GS+  A+ VF  + +KD+VSWNT+I           A+++++ 
Sbjct: 127 EFELFVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSWNTLITGYAQNGLASEAIEVYLL 185

Query: 450 MLQNFE--PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
           M ++ E  P+  T   ILPA + + AL++G  IHG ++++ + +D  V   ++DMY KCG
Sbjct: 186 MEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCG 245

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            L  A SLF  +P K+ + W  MI+ YG+HG G  A+  F +M+   ++PD ++F+S+L 
Sbjct: 246 KLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLS 305

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSHSGLV +    FNMM  E  I+P L+HY CMVDL  R G L  A+ FI+ MP+ PDA
Sbjct: 306 ACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDA 365

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
           + WG+LL  CRIH  ++L +  +E +FE++ +N GYYVLL+N+YA   KWE V  +R   
Sbjct: 366 SAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLA 425

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
             RGL+KNPG S I +  KV++F  G  +HP  ++I   L+ L  ++K  GY P   + L
Sbjct: 426 RDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVL 485

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
            + +E EKE  L GHSE+LA+A+GI++      IR+ KNLRVCGDCH + KF+S    RE
Sbjct: 486 QDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITERE 545

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           I++RDS+RFHHFK G CSC  +W
Sbjct: 546 IIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 177/336 (52%), Gaps = 15/336 (4%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V DA KLFD++  RD  SWN MISGY  NG A + L++  EM   G  +D  T+ +VL  
Sbjct: 45  VGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPV 104

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA  G ++ G+ +H + +K     E+  +N L++MY+K G L  A +VF  +  + VVSW
Sbjct: 105 CAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSW 163

Query: 337 TSMIAGYAREGVFDGAIRLFRGM-VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
            ++I GYA+ G+   AI ++  M   E I P+     SIL A +  G L+ G  +H  + 
Sbjct: 164 NTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVI 223

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           +N + S ++V   L+DMY KCG + DA S+F Q+P K+ V WN MI           AL+
Sbjct: 224 KNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALE 283

Query: 446 LFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVANAIVDMY 503
           LF  M  +  +PD +T   +L AC+    +   +     +   +GI         +VD++
Sbjct: 284 LFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLF 343

Query: 504 VKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
            + G L +A +    +P + D  +W  ++    +HG
Sbjct: 344 GRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHG 379



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 184/377 (48%), Gaps = 40/377 (10%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +++ C DL    DGKK+H ++ + G   D  V  S LV M+   G + + R++F+ +   
Sbjct: 3   VVKACGDLL---DGKKIHCLVLKLGFEWDVFVAAS-LVHMYSRFGLVGDARKLFDDMPAR 58

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK--- 218
               WN ++  Y + GN  E+L +  +M+  G+  D+ T + VL   A VG+    K   
Sbjct: 59  DRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIH 118

Query: 219 -----------------------------DAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                         A K+F  L  +DVVSWN +I+GY  NG+A 
Sbjct: 119 LYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLAS 177

Query: 250 KGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           + +EV+  M      + +  T V++L   ++ GAL  G  +H   +K C   ++     L
Sbjct: 178 EAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCL 237

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           +DMY KCG LD AI +F ++  ++ V W +MI+ Y   G  + A+ LFR M  E ++PD 
Sbjct: 238 IDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDH 297

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFN 427
               S+L AC+  GL+   +   + ++E   ++ SL     ++D++ + G +  A +   
Sbjct: 298 ITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIK 357

Query: 428 QMPVK-DIVSWNTMIGA 443
           +MP++ D  +W  ++ A
Sbjct: 358 KMPIQPDASAWGALLNA 374



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/420 (22%), Positives = 176/420 (41%), Gaps = 84/420 (20%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  +C+ GN  +A+++      E  K+D  T  S+L +CA +  +  GK +H  +
Sbjct: 62  SWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYV 121

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+  +  V  + L+ M+   G L   ++VF  +    V  WN L+  Y++ G   E+
Sbjct: 122 IKHGLEFELFV-SNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASEA 179

Query: 183 LYLFKKMQSL-GIAADSYTFSCVLKCLAVVGNSR-------------------------- 215
           + ++  M+    I  +  T+  +L   + VG  +                          
Sbjct: 180 IEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLID 239

Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                 ++ DA  LF ++  ++ V WN MIS Y  +G  EK LE+F+EM       D  T
Sbjct: 240 MYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHIT 299

Query: 270 MVTVLSGCANCGALM-----FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            V++LS C++ G +      F      + +K      +     ++D++ + G+L+ A   
Sbjct: 300 FVSLLSACSHSGLVSDAQWCFNMMEEEYGIKP----SLKHYGCMVDLFGRAGELEMAFNF 355

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
            +KM                                   I+PD  A  ++L+AC   G +
Sbjct: 356 IKKM----------------------------------PIQPDASAWGALLNACRIHGNI 381

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG---SMADAESVFNQMPVKDIVSWNTMI 441
           E+GK   + + E D ++  Y    L ++YA  G    + D  S+     ++    W+++I
Sbjct: 382 ELGKHASERLFEVDSENVGYYV-LLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSII 440



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 121/248 (48%), Gaps = 13/248 (5%)

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
           P   +   L  G++IH  +L+ G   D  VA ++V MY + G++  AR LFD +PA+D  
Sbjct: 2   PVVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRG 61

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           SW  MI+GY  +G   +A+   ++MR  G++ D ++  SVL  C+  G +  G +  ++ 
Sbjct: 62  SWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSG-KLIHLY 120

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
             +  +E +L     ++++ ++ G+L  A +   ++    D   W +L+ G   + +  L
Sbjct: 121 VIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL--IKDVVSWNTLITG---YAQNGL 175

Query: 646 AEKVAEHVFELEP-----DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN--PGC 698
           A +  E    +E       N G +V +   Y+     ++  ++  ++ +  L  +   G 
Sbjct: 176 ASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGT 235

Query: 699 SWIEIKGK 706
             I++ GK
Sbjct: 236 CLIDMYGK 243


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/707 (36%), Positives = 396/707 (56%), Gaps = 35/707 (4%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           + L+  +   G +++ R VF+++ +  +  WN ++  Y +    +E+  +F KM      
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
           + +   S  +       N+  + +A ++FD + +R+VVSW  M+ GY+  G+  +   +F
Sbjct: 162 SWNGLVSGYI-------NNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLF 214

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
            +M       ++ +   +L G    G +    A   F +     K++     ++  Y + 
Sbjct: 215 WQMPE----KNVVSWTVMLGGLLQEGRI--DEACRLFDMMP--EKDVVTRTNMIGGYCQV 266

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G L  A  +F++M  R+VVSWT+MI GY +    D A +LF  M     E +  + T++L
Sbjct: 267 GRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAML 322

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
                 G L+   ++ + +       S+   NA++  + + G +  A  VF+QM  KD  
Sbjct: 323 KGYTNCGRLDEASELFNAMP----IKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEG 378

Query: 436 SWNTMI----------GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYI 484
           +W+ MI           AL+LF  M  +   P+  ++  +L  CA LA L+ GREIH  +
Sbjct: 379 TWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQL 438

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
           +R     D  VA+ ++ MY+KCG L  A+ +FD    KD++ W  +I GY  HG G +A+
Sbjct: 439 VRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEAL 498

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
             F+DM  +GI PD+V+F+ VL ACS++G V +G   FN M  +  +E K+EHYACMVDL
Sbjct: 499 RVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDL 558

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
           L R G L+EA   IE MP+  DA IWG+LL  CR H ++ LAE  A+ +  LEP N G +
Sbjct: 559 LGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPF 618

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS-HPHAKKI 723
           +LL+N+YA   +W++V +LR  +  R + K PGCSWI ++ KV+ F  G SS HP   +I
Sbjct: 619 ILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEI 678

Query: 724 ESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRV 783
             +L+ L   ++  GY+P   + L + DE EK  +L  HSEKLA+A+G+L +P G  IRV
Sbjct: 679 NRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRV 738

Query: 784 TKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KNLRVCGDCH   K ++K   REI+LRD+NRFHHFKDG CSCR +W
Sbjct: 739 MKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 86/163 (52%), Gaps = 9/163 (5%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S+L +CA L +L+ G+++H+ +  S   +D  V  S L+ M++ CG+L + ++VF++   
Sbjct: 417 SVLSVCAGLANLDHGREIHAQLVRSQFDLDVYV-ASVLLSMYIKCGNLAKAKQVFDRFAV 475

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
             V +WN ++  Y++ G   E+L +F  M   GI  D  TF  VL   +  GN   VK  
Sbjct: 476 KDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGN---VKKG 532

Query: 221 HKLFDELS-----DRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
            ++F+ +      ++ +  + CM+      G   + +++ ++M
Sbjct: 533 LEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKM 575


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 253/752 (33%), Positives = 404/752 (53%), Gaps = 113/752 (15%)

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV-- 210
           ++F++I+N   F+WN +M  Y ++ + +++L L+K M    +  D+YT+  V++  AV  
Sbjct: 96  QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 155

Query: 211 ----------------------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMIS 240
                                 V N+          ++DA KLFDE    D VSWN +++
Sbjct: 156 LEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILA 215

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY+  G  E+   +F +M                                         +
Sbjct: 216 GYVKKGDVEEAKLIFDQMP---------------------------------------QR 236

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            I  +N+++ +  K G +  A ++F +M E+ +VSW+++I+GY + G+++ A+ +F  M 
Sbjct: 237 NIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMN 296

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA------ 414
             G+  D   + S+L ACA   +++ GK +H  +    ++S + + NAL+ MY+      
Sbjct: 297 ANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIM 356

Query: 415 -------------------------KCGSMADAESVFNQMPVKDIVSWNTMIGA------ 443
                                    KCGS+  A ++F+ MP KDIVSW+ +I        
Sbjct: 357 DAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDC 416

Query: 444 ----LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
               L LF  M L    PD   +  ++ AC  LAAL++G+ +H YI ++G+  +  +   
Sbjct: 417 FSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTT 476

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           ++DMY+KCG +  A  +F+ +  K + SW  +I G  ++G    ++  F++M+  G+ P+
Sbjct: 477 LLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPN 536

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
           E++F+ VL AC H GLVDEG   F  M  +  IEP ++HY CMVDLL R G L+EA + I
Sbjct: 537 EITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLI 596

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           E MP+APD   WG+LL  C+ H + ++ E+V   + EL+PD+ G++VLL+N++A    WE
Sbjct: 597 ESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWE 656

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           +V ++R  + ++G+ K PGCS IE  G V+ F+AG  +HP   K+E +L  +   +K EG
Sbjct: 657 DVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEG 716

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
           Y P T    ++ DE EKE  L  HSEKLA+AFG+L +     IR+ KNLR+C DCH  AK
Sbjct: 717 YAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAK 776

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +SK   REIV+RD +RFH+FK+G CSC  +W
Sbjct: 777 LISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 194/442 (43%), Gaps = 72/442 (16%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           N  I  +   GN+  A ++    E   +D+ ++ SIL        +E+ K +   + +  
Sbjct: 180 NTLINMYAVCGNMRDARKLF--DESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRN 237

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
           IV  +      ++ +    G + E  ++FN++D   +  W+ L+  Y + G ++E+L +F
Sbjct: 238 IVASN-----SMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMF 292

Query: 187 KKMQSLGIAADSYTFSCVLKC---LAVV-----------------------------GNS 214
            +M + G+  D      VL     L++V                               S
Sbjct: 293 IEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGS 352

Query: 215 RRVKDAHKL-------------------------------FDELSDRDVVSWNCMISGYI 243
             + DA KL                               FD + ++D+VSW+ +ISGY 
Sbjct: 353 GEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYA 412

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            +    + L +F EM       D   +V+V+S C +  AL  G+ VHA+  K      + 
Sbjct: 413 QHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVI 472

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
              TLLDMY KCG ++ A+ VF  M E+ V SW ++I G A  G+ + ++ +F  M   G
Sbjct: 473 LGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNG 532

Query: 364 IEPDVYAITSILHACACDGLLEIGK-DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           + P+      +L AC   GL++ G+      I+++ ++ ++     ++D+  + G + +A
Sbjct: 533 VIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEA 592

Query: 423 ESVFNQMPV-KDIVSWNTMIGA 443
           E +   MP+  D+ +W  ++GA
Sbjct: 593 EKLIESMPMAPDVATWGALLGA 614



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 175/374 (46%), Gaps = 33/374 (8%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL-LDMYSKCGDLDGAIR 323
           + L+ + T L  C N     F R +    L    S   + +  L     S    LD +++
Sbjct: 39  ITLSILETHLHNCHNLKQ--FNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQ 96

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           +F+++   +   W +M+  Y +    + A+ L++ MV+  + PD Y    ++ ACA   L
Sbjct: 97  IFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLL 156

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
              GK++HD++ +    S +YV N L++MYA CG+M DA  +F++ PV D VSWN+    
Sbjct: 157 EFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNS---- 212

Query: 444 LDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
                               IL        +E  + I   + +  I A    +N+++ + 
Sbjct: 213 --------------------ILAGYVKKGDVEEAKLIFDQMPQRNIVA----SNSMIVLL 248

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            K G ++ A  LF+ +  KD++SW+ +I+GY  +G   +A+  F +M   G+  DEV  +
Sbjct: 249 GKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVV 308

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           SVL AC+H  +V  G +  + +     IE  +     ++ + S +G + +A +       
Sbjct: 309 SVLSACAHLSIVKTG-KMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFN-GSH 366

Query: 624 APDATIWGSLLCGC 637
             D   W S++ GC
Sbjct: 367 NLDQISWNSMISGC 380



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 111/242 (45%), Gaps = 7/242 (2%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D     S++  C  L +L+ GK VH+ I ++G+ ++  +LG+ L+ M++ CG ++    V
Sbjct: 435 DETILVSVISACTHLAALDQGKWVHAYIRKNGLKVN-VILGTTLLDMYMKCGCVENALEV 493

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           FN ++   V  WN L+   +  G  + SL +F +M++ G+  +  TF  VL     +G  
Sbjct: 494 FNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMG-- 551

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL--EVFKEMLNLGFNVDLATMVT 272
             V +    F  + ++  +  N    G + + +   GL  E  K + ++    D+AT   
Sbjct: 552 -LVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGA 610

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  C   G    G  V    L         F+  L ++++  GD +  + V   M ++ 
Sbjct: 611 LLGACKKHGDTEMGERV-GRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQG 669

Query: 333 VV 334
           VV
Sbjct: 670 VV 671


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/707 (36%), Positives = 396/707 (56%), Gaps = 35/707 (4%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           + L+  +   G +++ R VF+++ +  +  WN ++  Y +    +E+  +F KM      
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
           + +   S  +       N+  + +A ++FD + +R+VVSW  M+ GY+  G+  +   +F
Sbjct: 162 SWNGLVSGYI-------NNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLF 214

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
            +M       ++ +   +L G    G +    A   F +     K++     ++  Y + 
Sbjct: 215 WQMPE----KNVVSWTVMLGGLLQEGRI--DEACRLFDMMP--EKDVVTRTNMIGGYCQV 266

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G L  A  +F++M  R+VVSWT+MI GY +    D A +LF  M     E +  + T++L
Sbjct: 267 GRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAML 322

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
                 G L+   ++ + +       S+   NA++  + + G +  A  VF+QM  KD  
Sbjct: 323 KGYTNCGRLDEASELFNAMP----IKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEG 378

Query: 436 SWNTMI----------GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYI 484
           +W+ MI           AL+LF  M  +   P+  ++  +L  CA LA L+ GREIH  +
Sbjct: 379 TWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQL 438

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
           +R     D  VA+ ++ MY+KCG L  A+ +FD    KD++ W  +I GY  HG G +A+
Sbjct: 439 VRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEAL 498

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
             F+DM  +GI PD+V+F+ VL ACS++G V +G   FN M  +  +E K+EHYACMVDL
Sbjct: 499 RVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDL 558

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
           L R G L+EA   IE MP+  DA IWG+LL  CR H ++ LAE  A+ +  LEP N G +
Sbjct: 559 LGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPF 618

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS-HPHAKKI 723
           +LL+N+YA   +W++V +LR  +  R + K PGCSWI ++ KV+ F  G SS HP   +I
Sbjct: 619 ILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEI 678

Query: 724 ESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRV 783
             +L+ L   ++  GY+P   + L + DE EK  +L  HSEKLA+A+G+L +P G  IRV
Sbjct: 679 NRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRV 738

Query: 784 TKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KNLRVCGDCH   K ++K   REI+LRD+NRFHHFKDG CSCR +W
Sbjct: 739 MKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 86/163 (52%), Gaps = 9/163 (5%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S+L +CA L +L+ G+++H+ +  S   +D  V  S L+ M++ CG+L + ++VF++   
Sbjct: 417 SVLSVCAGLANLDHGREIHAQLVRSQFDLDVYV-ASVLLSMYIKCGNLAKAKQVFDRFAV 475

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
             V +WN ++  Y++ G   E+L +F  M   GI  D  TF  VL   +  GN   VK  
Sbjct: 476 KDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGN---VKKG 532

Query: 221 HKLFDELS-----DRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
            ++F+ +      ++ +  + CM+      G   + +++ ++M
Sbjct: 533 LEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKM 575


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 271/731 (37%), Positives = 407/731 (55%), Gaps = 82/731 (11%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
           WN+ +  Y +TG   E+L +FK+M      + +   S  L+       +   + A KLFD
Sbjct: 67  WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLR-------NGEFELARKLFD 119

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
           E+ +RD+VSWN MI GY+ N    K  E+F+ M       D+ +  T+LSG A  G +  
Sbjct: 120 EMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDD 175

Query: 286 GRAV---------------------HAFALKACF---SKE----ISFNNTLLDMYSKCGD 317
            R+V                     ++   +AC    S+E    +S+ N LL  + K   
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW-NCLLGGFVKKKK 234

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           +  A + F+ M  R VVSW ++I GYA+ G  D A +LF     E    DV+  T+++  
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQDVFTWTAMVSG 290

Query: 378 CACDGLLEIGKDVHDYIKENDMQS-----SLYVSNALMDM-------------------- 412
              + ++E  +++ D + E +  S     + YV    M+M                    
Sbjct: 291 YIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMI 350

Query: 413 --YAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGV 459
             YA+CG +++A+++F++MP +D VSW  MI           AL LFV M  +    +  
Sbjct: 351 TGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRS 410

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           + +  L  CA + ALE G+++HG +++ G      V NA++ MY KCG +  A  LF  +
Sbjct: 411 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
             KD++SW  MIAGY  HGFG  A+  F  M++ G++PD+ + ++VL ACSH+GLVD+G 
Sbjct: 471 AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
           ++F  M  +  + P  +HYACMVDLL R G L +A+  ++ MP  PDA IWG+LL   R+
Sbjct: 531 QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRV 590

Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
           H   +LAE  A+ +F +EP+N+G YVLL+N+YA + +W +V KLR ++  +G+KK PG S
Sbjct: 591 HGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYS 650

Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
           WIEI+ K + F  G   HP   +I + L+ L L MK+ GY  KT   L + +E EKE  +
Sbjct: 651 WIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMV 710

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
             HSE+LA+A+GI+ + +G+ IRV KNLRVC DCH   K+M++   R I+LRD+NRFHHF
Sbjct: 711 RYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHF 770

Query: 820 KDGRCSCRGFW 830
           KDG CSC  +W
Sbjct: 771 KDGSCSCGDYW 781



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 201/486 (41%), Gaps = 74/486 (15%)

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           D D+  WN  IS Y+  G   + L VFK M     +V    M+   SG    G     R 
Sbjct: 61  DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWS-SVSYNGMI---SGYLRNGEFELARK 116

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +          +++   N ++  Y +  +L  A  +FE M ER V SW +M++GYA+ G 
Sbjct: 117 L----FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHA--------------------------CACDG 382
            D A  +F  M     E +  +  ++L A                          C   G
Sbjct: 173 VDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGG 228

Query: 383 LLEIGKDVHDYIKENDMQSSLYVS-NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
            ++  K V      + M     VS N ++  YA+ G + +A  +F++ PV+D+ +W  M+
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288

Query: 442 G----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                      A +LF  M +  E   V+   +L        +E  +E+        +  
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNE---VSWNAMLAGYVQGERMEMAKEL------FDVMP 339

Query: 492 DRNVA--NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
            RNV+  N ++  Y +CG +  A++LFD +P +D +SW  MIAGY   G   +A+  F  
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM---RYE--CNIEPKLEHYACMVDL 604
           M + G   +  SF S L  C+    ++ G +    +    YE  C +   L    C    
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC---- 455

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTG 662
             + G++ EA    + M    D   W +++ G   H   ++A +  E +    L+PD+  
Sbjct: 456 --KCGSIEEANDLFKEM-AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512

Query: 663 YYVLLA 668
              +L+
Sbjct: 513 MVAVLS 518



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 167/355 (47%), Gaps = 39/355 (10%)

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           L  C   +I   N  +  Y + G  + A+RVF++M   S VS+  MI+GY R G F+ A 
Sbjct: 56  LLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELAR 115

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
           +LF  M     E D+ +   ++     +  L   +++ + + E D+ S     N ++  Y
Sbjct: 116 KLFDEMP----ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS----WNTMLSGY 167

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACIL-PACASLA 472
           A+ G + DA SVF++MP K+ VSWN ++ A       +QN +   +  AC+L  +  + A
Sbjct: 168 AQNGCVDDARSVFDRMPEKNDVSWNALLSAY------VQNSK---MEEACMLFKSRENWA 218

Query: 473 ALERGREIHGYILRHGISADR------NVA-----NAIVDMYVKCGVLVLARSLFDMIPA 521
            +     + G++ +  I   R      NV      N I+  Y + G +  AR LFD  P 
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           +D+ +WT M++GY  +    +A   F+ M     E +EVS+ ++L        ++     
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKEL 334

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           F++M   C     +  +  M+   ++ G +SEA    + MP   D   W +++ G
Sbjct: 335 FDVM--PCR---NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 133/330 (40%), Gaps = 68/330 (20%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           ++  +  CG + E + +F+K+       W  ++  YS++G+  E+L LF +M+  G   +
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408

Query: 198 SYTFSCVLKCLA------------------------VVGNS--------RRVKDAHKLFD 225
             +FS  L   A                         VGN+          +++A+ LF 
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
           E++ +D+VSWN MI+GY  +G  E  L  F+ M   G   D ATMV VLS C++ G +  
Sbjct: 469 EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK 528

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           GR                       M    G +  +              +  M+    R
Sbjct: 529 GRQY------------------FYTMTQDYGVMPNS------------QHYACMVDLLGR 558

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS-LY 404
            G+ + A  L + M     EPD     ++L A    G  E+ +   D I   + ++S +Y
Sbjct: 559 AGLLEDAHNLMKNMP---FEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 615

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           V   L ++YA  G   D   +  +M  K +
Sbjct: 616 V--LLSNLYASSGRWGDVGKLRVRMRDKGV 643



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 16/218 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G+  +A+ +    E+   +++  ++ S L  CAD+ +LE GK++H  +
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435

Query: 123 CESGIVIDDG-VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            + G   + G  +G+ L+ M+  CG ++E   +F ++    +  WN ++  YS+ G  + 
Sbjct: 436 VKGGY--ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWN----- 236
           +L  F+ M+  G+  D  T   VL   +  G    V    + F  ++    V  N     
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTG---LVDKGRQYFYTMTQDYGVMPNSQHYA 550

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           CM+      G+ E    + K   N+ F  D A   T+L
Sbjct: 551 CMVDLLGRAGLLEDAHNLMK---NMPFEPDAAIWGTLL 585


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/622 (39%), Positives = 363/622 (58%), Gaps = 45/622 (7%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +FD + +R+V+ +N MI  Y+ N + +  L VF++M++ GF+ D  T   VL  C+ 
Sbjct: 86  ARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSC 145

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L  G  +H    K      +   N L+ +Y KCG L  A  V ++M  + VVSW SM
Sbjct: 146 SDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSM 205

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           +AGYA+   FD A+ + R M     +PD   + S+L A                +     
Sbjct: 206 VAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPA----------------VTNTSS 249

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
           ++ LYV                 E +F  +  K +VSWN MI           ++DL++ 
Sbjct: 250 ENVLYV-----------------EEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQ 292

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M +   EPD +T A +L AC  L+AL  GR IH Y+ R  +  +  + N+++DMY +CG 
Sbjct: 293 MGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGC 352

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  A+ +FD +  +D+ SWT +I+ YGM G G +A+A F +M+ +G  PD ++F+++L A
Sbjct: 353 LEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSA 412

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSHSGL++EG  +F  M  +  I P +EH+AC+VDLL R+G + EAY  I+ MP+ P+  
Sbjct: 413 CSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNER 472

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           +WG+LL  CR++  + +    A+ + +L P+ +GYYVLL+N+YA+A +W EV  +R  + 
Sbjct: 473 VWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMK 532

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
           RR ++K PG S +E+  +V+ F+AG + HP +K+I   L  L  +MK  GY PKT  AL 
Sbjct: 533 RRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALH 592

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + +E +KE  L  HSEKLA+ F ILN      IR+TKNLRVCGDCH  AK +SK  +REI
Sbjct: 593 DVEEEDKECHLAVHSEKLAIVFAILNTQES-PIRITKNLRVCGDCHIAAKLISKIVQREI 651

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           V+RD+NRFHHFKDG CSC  +W
Sbjct: 652 VIRDTNRFHHFKDGICSCGDYW 673



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 181/342 (52%), Gaps = 9/342 (2%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  TY  +L+ C+   +L  G ++H  + + G+ ++  V G+ L+ ++  CG L E R V
Sbjct: 132 DHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFV-GNGLIALYGKCGCLPEARCV 190

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
            +++ +  V  WN ++  Y++   F ++L + ++M  +    D+ T + +L  +    +S
Sbjct: 191 LDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNT-SS 249

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             V    ++F  L  + +VSWN MIS Y+ N +  K ++++ +M       D  T  +VL
Sbjct: 250 ENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVL 309

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             C +  AL+ GR +H +  +      +   N+L+DMY++CG L+ A RVF++M  R V 
Sbjct: 310 RACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVA 369

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SWTS+I+ Y   G    A+ LF  M   G  PD  A  +IL AC+  GLL  GK    Y 
Sbjct: 370 SWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGK---FYF 426

Query: 395 KE--NDMQSSLYVSN--ALMDMYAKCGSMADAESVFNQMPVK 432
           K+  +D + +  + +   L+D+  + G + +A ++  QMP+K
Sbjct: 427 KQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMK 468



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 186/420 (44%), Gaps = 80/420 (19%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L    D+K+L   K VHS +       ++  LG KL+  +   G+    R VF+ I   
Sbjct: 41  VLDQYPDIKTL---KNVHSKVFNLSFH-ENPSLGIKLMRAYAARGEPGLARNVFDVIPER 96

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-------------- 207
            V  +N+++  Y     + ++L +F+ M S G + D YT+ CVLK               
Sbjct: 97  NVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLH 156

Query: 208 ------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                             +A+ G    + +A  + DE+  +DVVSWN M++GY  N   +
Sbjct: 157 GAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFD 216

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
             L++ +EM  +    D  TM ++L    N                       S  N L 
Sbjct: 217 DALDICREMDGVRQKPDACTMASLLPAVTN----------------------TSSENVLY 254

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
                         +F  + ++S+VSW  MI+ Y +  +   ++ L+  M +  +EPD  
Sbjct: 255 -----------VEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAI 303

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
              S+L AC     L +G+ +H+Y++   +  ++ + N+L+DMYA+CG + DA+ VF++M
Sbjct: 304 TCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRM 363

Query: 430 PVKDIVSWNTMI----------GALDLFVAMLQNFE-PDGVTMACILPACASLAALERGR 478
             +D+ SW ++I           A+ LF  M  + + PD +    IL AC+    L  G+
Sbjct: 364 KFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGK 423



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 19/281 (6%)

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
           K+VH  +       +  +   LM  YA  G    A +VF+ +P ++++ +N MI      
Sbjct: 52  KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNN 111

Query: 442 ----GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL +F  M+   F PD  T  C+L AC+    L  G ++HG + + G+  +  V 
Sbjct: 112 HLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVG 171

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           N ++ +Y KCG L  AR + D + +KD++SW  M+AGY  +    DA+    +M     +
Sbjct: 172 NGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQK 231

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK-LEHYACMVDLL---SRTGNLS 612
           PD  +  S+L A +++    E   +   M    N+E K L  +  M+ +    S  G   
Sbjct: 232 PDACTMASLLPAVTNTS--SENVLYVEEMFM--NLEKKSLVSWNVMISVYMKNSMPGKSV 287

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
           + Y  +    V PDA    S+L  C     + L  ++ E+V
Sbjct: 288 DLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYV 328


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/595 (41%), Positives = 338/595 (56%), Gaps = 49/595 (8%)

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            G+  HA  +             ++ MY+  GDLD A+ VF+++   S + + S+I  Y 
Sbjct: 95  LGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYT 154

Query: 345 REGVFDGAIRLFRGMVRE---GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           R G             R    G+  D + +  +L +CA    + +G+ VH       ++ 
Sbjct: 155 RHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEG 214

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------------------- 442
             YV  +L+DMY KCG + DA  +F++M V+D+ SWN +I                    
Sbjct: 215 DFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERME 274

Query: 443 ----------------------ALDLFVAMLQN---FEPDGVTMACILPACASLAALERG 477
                                 AL LF  MLQ+    +P+ VT+  +LPACA  AALERG
Sbjct: 275 HRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERG 334

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP--AKDLISWTIMIAGYG 535
           R IH +    G+  + +V  A+  MY KC  LV AR  FDMI    K+LI+W  MI  Y 
Sbjct: 335 RRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYA 394

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
            HG G +A++ F +M +AG++PD V+F+ +L  CSHSGL+D G   FN M    ++EP++
Sbjct: 395 SHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRV 454

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           EHYAC+VDLL R G L EA   I  MP+    ++WG+LL  CR H  +++AE  A  +F 
Sbjct: 455 EHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFV 514

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           LEPDN+G YVLL+N+YAEA  WEEVKKLR  +  +G+KK+PGCSWIEI GK ++F+    
Sbjct: 515 LEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADK 574

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
           SHP AK+I   L+ L  ++K  GY P T + L +  E EKE  L  HSEKLA+AFG+LN 
Sbjct: 575 SHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNT 634

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             G  +RVTKNLR+CGDCH   KF+SK   REI++RD NRFH FKDG CSC  +W
Sbjct: 635 RPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 185/418 (44%), Gaps = 73/418 (17%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           +Y  I Q       ++ G++ H+ I   G+   +  L +K+V M+ + GDL     VF++
Sbjct: 79  SYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQ-PNAFLAAKMVAMYASSGDLDSAVVVFDR 137

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKES---LYLFKKMQSLGIAADSYTFSCVLKCLA----- 209
           IDN    ++N ++  Y++ G        L  + +M  LG+  D++T   VLK  A     
Sbjct: 138 IDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRV 197

Query: 210 ---------------------------------VVGNSRRVKD----------------- 219
                                            V+G++R++ D                 
Sbjct: 198 CMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGY 257

Query: 220 --------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG--FNVDLAT 269
                   A  LF+ +  R++VSW  MISGY  NG AE+ L +F EML  G     +  T
Sbjct: 258 MKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVT 317

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V+VL  CA   AL  GR +H FA         S    L  MY+KC  L  A   F+ + 
Sbjct: 318 IVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIA 377

Query: 330 E--RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           +  +++++W +MI  YA  G    A+ +F  M+R G++PD      +L  C+  GL++ G
Sbjct: 378 QNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG 437

Query: 388 -KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
               +D    + ++  +     ++D+  + G + +A+ + +QMP++   S W  ++ A
Sbjct: 438 LNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAA 495



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 197/437 (45%), Gaps = 58/437 (13%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG---LEVFKEMLNLG 262
           K +A+  +S  +  A  +FD + +   + +N +I  Y  +G        LE +  M  LG
Sbjct: 117 KMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLG 176

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
              D  T+  VL  CA+   +  GR VH   L+     +     +L+DMY KCG +  A 
Sbjct: 177 LLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDAR 236

Query: 323 RVFEKM------------------GE-------------RSVVSWTSMIAGYAREGVFDG 351
           ++F+KM                  GE             R++VSWT+MI+GY + G  + 
Sbjct: 237 KLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQ 296

Query: 352 AIRLFRGMVREGIE--PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
           A+ LF  M+++G E  P+   I S+L ACA    LE G+ +HD+     +  +  V  AL
Sbjct: 297 ALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTAL 356

Query: 410 MDMYAKCGSMADAESVFNQMPV--KDIVSWNTMIG----------ALDLFVAMLQ-NFEP 456
             MYAKC S+ +A   F+ +    K++++WNTMI           A+ +F  ML+   +P
Sbjct: 357 AGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQP 416

Query: 457 DGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           D VT   +L  C+    ++ G    +     H +         +VD+  + G LV A+ L
Sbjct: 417 DAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKEL 476

Query: 516 FDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS---FISVLYACSH 571
              +P +   S W  ++A    H      IA     R   +EPD       +S LYA   
Sbjct: 477 ISQMPMQAGPSVWGALLAACRSH--RNLEIAELAARRLFVLEPDNSGNYVLLSNLYA--E 532

Query: 572 SGLVDEGWRFFNMMRYE 588
           +G+ +E  +   +++Y+
Sbjct: 533 AGMWEEVKKLRALLKYQ 549



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 97/430 (22%)

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           L + +++    P  YA   I         +++G+  H  I  + +Q + +++  ++ MYA
Sbjct: 66  LLQPILQHFPHPSSYA--PIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYA 123

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIGA-------------LDLFVAM-LQNFEPDGVT 460
             G +  A  VF+++     + +N++I A             L+ +  M       D  T
Sbjct: 124 SSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFT 183

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           +  +L +CA L+ +  GR +HG  LR G+  D  V  +++DMYVKCGV+  AR LFD + 
Sbjct: 184 LPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMI 243

Query: 521 AKDL-------------------------------ISWTIMIAGYGMHGFGCDAIATFND 549
            +D+                               +SWT MI+GY  +GF   A+  F++
Sbjct: 244 VRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDE 303

Query: 550 MRQAGIE--PDEVSFISVLYACSHSGLVDEGWRFFNM-----MRYECNIEPKLE-HYA-- 599
           M Q G E  P+ V+ +SVL AC+ S  ++ G R  +      +    +++  L   YA  
Sbjct: 304 MLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKC 363

Query: 600 -------CMVDLLSRTG-NL----------------SEAYRFIEMM---PVAPDATIWGS 632
                  C  D++++ G NL                 EA    E M    V PDA  +  
Sbjct: 364 YSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMG 423

Query: 633 LLCGCRIHHEVKLAEKVAEH------VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
           LL GC       L +    H      +  +EP    +Y  + ++   A +  E K+L   
Sbjct: 424 LLSGCS---HSGLIDAGLNHFNDMGTIHSVEP-RVEHYACVVDLLGRAGRLVEAKEL--- 476

Query: 687 ISRRGLKKNP 696
           IS+  ++  P
Sbjct: 477 ISQMPMQAGP 486



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 7/147 (4%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++ A I  + + G  E+A+    E+L    + K +  T  S+L  CA   +LE G+++H 
Sbjct: 280 SWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHD 339

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFI-WNLLMHEYSKTGN 178
                G+ ++  V  + L  M+  C  L E R  F+ I  NGK  I WN ++  Y+  G 
Sbjct: 340 FANGIGLHLNSSV-QTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGC 398

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVL 205
             E++ +F+ M   G+  D+ TF  +L
Sbjct: 399 GVEAVSIFENMLRAGVQPDAVTFMGLL 425


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 265/774 (34%), Positives = 423/774 (54%), Gaps = 49/774 (6%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           I+++C  +     GK++H++    G    D  +G+ LV M++    + +GR+VF  +   
Sbjct: 61  IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKR 120

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG--------- 212
            V  W  L+  Y + G   + + LF +M++ G+  + +TFS VL  +A  G         
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH 180

Query: 213 ---------------NSRR--------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                          NS          V++A  +F  +  RD+VSWN +++G + NG   
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDL 240

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L++F +  +    +  +T  TV++ CAN   L   R +H+  LK  F    +    L+
Sbjct: 241 EALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALM 300

Query: 310 DMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           D Y+K G LD A+ VF  M G ++VVSWT+MI G  + G    A  LF  M  +G+ P+ 
Sbjct: 301 DAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPND 360

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
              ++IL              +H  + + + + +  V  ALM  Y+K  S  +A S+F  
Sbjct: 361 LTYSTILTVSEA----SFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKM 416

Query: 429 MPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAA-LER 476
           +  KD+VSW+ M+          GA + F+ M +   +P+  T++  + ACAS AA ++ 
Sbjct: 417 IDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDL 476

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           GR+ H   ++H       V++A+V MY + G +  A+ +F+    +DL+SW  M++GY  
Sbjct: 477 GRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQ 536

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG+   A+  F  M   GI+ D ++F+SV+  C+H+GLV+EG ++F++M  +  I P ++
Sbjct: 537 HGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMD 596

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HYACMVDL SR G L E    IE MP     TIW +LL  CR+H  V+L +  AE +  L
Sbjct: 597 HYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSL 656

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           EP ++  YVLL+N+Y+ A KW+E  ++R+ +  + ++K  GCSWI+IK KV+ F+A   S
Sbjct: 657 EPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKS 716

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP +++I + L+ +  ++K+EGY P T +   +  E +KE  L  HSE+LA+AFG++  P
Sbjct: 717 HPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATP 776

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               + + KNLRV GD H + K +S+   REIV+RD  RFHHFK G CSC  FW
Sbjct: 777 PAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 189/397 (47%), Gaps = 35/397 (8%)

Query: 81  KAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           +A+++ + S  S   +   TY +++ LCA+LK L   +++HS + + G      V+ + L
Sbjct: 241 EALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVM-TAL 299

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGK-VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           +  +   G L +   VF  +   + V  W  ++    + G+   +  LF +M+  G+A +
Sbjct: 300 MDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPN 359

Query: 198 SYTFSCVL--------------------KCLAVVGNSRRV--------KDAHKLFDELSD 229
             T+S +L                    +C   VG +  V        ++A  +F  +  
Sbjct: 360 DLTYSTILTVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQ 419

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA-LMFGRA 288
           +DVVSW+ M++ Y   G        F +M   G   +  T+ + +  CA+  A +  GR 
Sbjct: 420 KDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQ 479

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
            HA ++K      +  ++ L+ MY++ G ++ A  VFE+  +R ++SW SM++GYA+ G 
Sbjct: 480 FHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGY 539

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSN 407
              A+ +FR M  EGI+ D     S++  CA  GL+E G+   D  +++  +  ++    
Sbjct: 540 SQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYA 599

Query: 408 ALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            ++D+Y++ G + +  S+   MP       W  ++GA
Sbjct: 600 CMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGA 636


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/570 (39%), Positives = 351/570 (61%), Gaps = 12/570 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           + ++ CA    L   R +HA    + F+ +   +N+L+ MY KC  +  A  VF++M  +
Sbjct: 56  SFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            +VSWTS+IAGYA+  +   AI L  GM++   +P+ +   S+L A         G+ +H
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIH 175

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
               +      +YV +AL+DMYA+CG M  A +VF+++  K+ VSWN +I          
Sbjct: 176 ALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 443 -ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            AL  F  ML+N FE    T + +  + A L ALE+G+ +H ++++        V N ++
Sbjct: 236 SALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLL 295

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY K G ++ AR +FD +  KDL++W  M+  +  +G G +A++ F +MR++G+  +++
Sbjct: 296 DMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQI 355

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+ +L ACSH GLV EG R+F MM+ E ++EP+++HY  +V LL R G L+ A  FI  
Sbjct: 356 TFLCILTACSHGGLVKEGKRYFEMMK-EYDLEPEIDHYVTVVALLGRAGLLNYALVFIFK 414

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ P A +WG+LL  CR+H   K+ +  A+HVFEL+PD++G  VLL N+YA   +W+  
Sbjct: 415 MPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAA 474

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            ++R  +   G+KK P CSW+E++  V++FVA   +HP A++I  +   +  ++++EGY 
Sbjct: 475 ARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYV 534

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P   Y L++ D+ EKE  L  HSEKLA+AF ++ +PAG TIR+ KN+R+CGDCH   K++
Sbjct: 535 PDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYI 594

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK   REIV+RD+NRFHHF  G CSC  +W
Sbjct: 595 SKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 195/385 (50%), Gaps = 15/385 (3%)

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           R V DA  +FD++  +D+VSW  +I+GY  N +  + + +   ML   F  +  T  ++L
Sbjct: 100 RSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLL 159

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
                      GR +HA A+K  + +++   + LLDMY++CG +D A  VF+K+  ++ V
Sbjct: 160 KAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGV 219

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW ++I+G+AR+G  + A+  F  M+R G E   +  +S+  + A  G LE GK VH ++
Sbjct: 220 SWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHV 279

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLF------V 448
            ++  + + +V N L+DMYAK GSM DA  VF+++  KD+V+WN+M+ A   +      V
Sbjct: 280 IKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAV 339

Query: 449 AMLQNFEPDGV-----TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           +  +     GV     T  CIL AC+    ++ G+     +  + +  + +    +V + 
Sbjct: 340 SHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALL 399

Query: 504 VKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
            + G+L  A      +P +   + W  ++A   MH      +  F       ++PD+   
Sbjct: 400 GRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNA--KVGQFAADHVFELDPDDSGP 457

Query: 563 ISVLYAC-SHSGLVDEGWRFFNMMR 586
             +LY   + +G  D   R   MM+
Sbjct: 458 PVLLYNIYASTGQWDAAARVRMMMK 482



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 174/380 (45%), Gaps = 34/380 (8%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + Y S +  CA  K+LED +K+H+ +  S     D  L + L+ M+  C  + + R VF+
Sbjct: 52  RVYRSFITACAQSKNLEDARKIHAHLGSSRFA-GDAFLDNSLIHMYCKCRSVLDARNVFD 110

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           ++    +  W  L+  Y++     E++ L   M       + +TF+ +LK      +S  
Sbjct: 111 QMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGT 170

Query: 217 VKDAHKL--------------------------------FDELSDRDVVSWNCMISGYIA 244
            +  H L                                FD+L  ++ VSWN +ISG+  
Sbjct: 171 GRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFAR 230

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G  E  L  F EML  GF     T  +V S  A  GAL  G+ VHA  +K+        
Sbjct: 231 KGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFV 290

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            NTLLDMY+K G +  A +VF+++  + +V+W SM+  +A+ G+   A+  F  M + G+
Sbjct: 291 GNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGV 350

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
             +      IL AC+  GL++ GK   + +KE D++  +     ++ +  + G +  A  
Sbjct: 351 YLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALV 410

Query: 425 VFNQMPVKDIVS-WNTMIGA 443
              +MP++   + W  ++ A
Sbjct: 411 FIFKMPMEPTAAVWGALLAA 430



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 152/283 (53%), Gaps = 17/283 (6%)

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P VY   S + ACA    LE  + +H ++  +      ++ N+L+ MY KC S+ DA +V
Sbjct: 51  PRVY--RSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNV 108

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAAL 474
           F+QM  KD+VSW ++I           A+ L   ML+  F+P+G T A +L A  + A  
Sbjct: 109 FDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
             GR+IH   ++ G   D  V +A++DMY +CG + +A ++FD + +K+ +SW  +I+G+
Sbjct: 169 GTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG-WRFFNMMRYECNIEP 593
              G G  A+ TF +M + G E    ++ SV  + +  G +++G W   ++++    +  
Sbjct: 229 ARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTA 288

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            + +   ++D+ +++G++ +A +  + +    D   W S+L  
Sbjct: 289 FVGN--TLLDMYAKSGSMIDARKVFDRVD-NKDLVTWNSMLTA 328


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 234/595 (39%), Positives = 370/595 (62%), Gaps = 23/595 (3%)

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + +     M   G   D  T   ++  C+  GA+  G+ VH       +  ++   NTLL
Sbjct: 38  RAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLL 97

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           +MY K   L+ A  +F++M ER+VVSWT+MI+ Y+ + + D A++    M REG+ P+++
Sbjct: 98  NMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNK-LNDKALKCLILMFREGVRPNMF 156

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
             +S+L AC  DGL  + + +H  I +  ++S ++V +AL+D+Y+K   + +A  VF++M
Sbjct: 157 TYSSVLRAC--DGLPNL-RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEM 213

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGR 478
           P +D+V WN++IG          AL+LF  M +  F  D  T+  +L AC  LA LE GR
Sbjct: 214 PTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGR 273

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           ++H ++L+     D  + NA++DMY KCG L  A S F  +  KD+ISW+ M+AG   +G
Sbjct: 274 QVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNG 331

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
           +   A+  F  M+++G  P+ ++ + VL+ACSH+GLV++GW +F  M+    ++P  EHY
Sbjct: 332 YSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHY 391

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
            C++DLL R G L EA + I  M   PD+  W +LL  CR+H  V LA   A+ + ELEP
Sbjct: 392 GCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEP 451

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
           ++ G Y+LL+N+YA  ++WE+V ++R+ ++ RG++K PGCSWIE+  ++++F+ G +SHP
Sbjct: 452 EDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHP 511

Query: 719 HAKKIESLLKRLRLEMKRE---GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
              KIE +++RL   ++R    GY P T + L + +  +KE +L  HSEKLA+ FG++NL
Sbjct: 512 ---KIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNL 568

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              +T+R+ KNLR+CGDCH  AK +S+   R IV+RD  R+HHF+DG CSC  +W
Sbjct: 569 SREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/398 (30%), Positives = 197/398 (49%), Gaps = 59/398 (14%)

Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK-------------------------- 222
           M+  G+ AD+ T+S ++KC +  G  +  K  H+                          
Sbjct: 46  MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105

Query: 223 ------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
                 LFDE+ +R+VVSW  MIS Y +N + +K L+    M   G   ++ T  +VL  
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRPNMFTYSSVLRA 164

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C     L   R +H   +K     ++   + L+D+YSK  DLD A+ VF++M  R +V W
Sbjct: 165 CDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVW 221

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            S+I G+A+    + A+ LF+ M R G   D   +TS+L AC    LLE+G+ VH ++ +
Sbjct: 222 NSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK 281

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
            D    L ++NAL+DMY KCGS+ DA S F++M  KD++SW+TM+           AL+L
Sbjct: 282 FD--QDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALEL 339

Query: 447 FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRH-----GISADRNVANAIV 500
           F +M ++   P+ +T+  +L AC+    +E+G     Y  R      G+   R     ++
Sbjct: 340 FESMKESGSRPNYITVLGVLFACSHAGLVEKG----WYYFRSMKKLFGVDPGREHYGCLI 395

Query: 501 DMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMH 537
           D+  + G L  A  L  +M    D ++W  ++    +H
Sbjct: 396 DLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVH 433



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 197/410 (48%), Gaps = 41/410 (10%)

Query: 69  EIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           E   FC   +L +AM  + + E+  +  D  TY  +++ C+   ++++GK+VH  I   G
Sbjct: 26  EFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKG 85

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
                 V+ + L+ M+V    L+E   +F+++    V  W  ++  YS   N K +L   
Sbjct: 86  YEPKMFVVNT-LLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDK-ALKCL 143

Query: 187 KKMQSLGIAADSYTFSCVLKCLAVVGNSRR-----------------------------V 217
             M   G+  + +T+S VL+    + N R+                             +
Sbjct: 144 ILMFREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDL 203

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
            +A  +FDE+  RD+V WN +I G+  N    + L +FK M   GF  D AT+ +VL  C
Sbjct: 204 DNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRAC 263

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
                L  GR VH   LK  F +++  NN L+DMY KCG L+ A   F +M E+ V+SW+
Sbjct: 264 TGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWS 321

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE- 396
           +M+AG A+ G    A+ LF  M   G  P+   +  +L AC+  GL+E G      +K+ 
Sbjct: 322 TMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKL 381

Query: 397 --NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
              D     Y    L+D+  + G + +A  + ++M  + D V+W T++GA
Sbjct: 382 FGVDPGREHY--GCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGA 429



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 157/307 (51%), Gaps = 19/307 (6%)

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
           A +  +     A+R    M R G+  D    + ++  C+  G ++ GK VH++I     +
Sbjct: 28  ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE 87

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD----------LFVAM 450
             ++V N L++MY K   + +AE +F++MP +++VSW TMI A            L +  
Sbjct: 88  PKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMF 147

Query: 451 LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
            +   P+  T + +L AC  L  L   R++H  I++ G+ +D  V +A++D+Y K   L 
Sbjct: 148 REGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLD 204

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            A  +FD +P +DL+ W  +I G+  +  G +A+  F  M++AG   D+ +  SVL AC+
Sbjct: 205 NALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACT 264

Query: 571 HSGLVDEGWRF-FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
              L++ G +   ++++++ +    L     ++D+  + G+L +A      M V  D   
Sbjct: 265 GLALLELGRQVHVHVLKFDQD----LILNNALIDMYCKCGSLEDANSAFSRM-VEKDVIS 319

Query: 630 WGSLLCG 636
           W +++ G
Sbjct: 320 WSTMVAG 326



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 157/329 (47%), Gaps = 43/329 (13%)

Query: 85  VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT 144
           +L   E  + +  TY S+L+ C  L +L   +++H  I ++G+   D  + S L+ ++  
Sbjct: 144 ILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLE-SDVFVRSALIDVYSK 199

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
             DL     VF+++    + +WN ++  +++  +  E+L LFK+M+  G  AD  T + V
Sbjct: 200 WSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSV 259

Query: 205 LKC---LAVVGNSRRV---------------------------KDAHKLFDELSDRDVVS 234
           L+    LA++   R+V                           +DA+  F  + ++DV+S
Sbjct: 260 LRACTGLALLELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVIS 319

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           W+ M++G   NG + + LE+F+ M   G   +  T++ VL  C++ G +  G   +  ++
Sbjct: 320 WSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKG-WYYFRSM 378

Query: 295 KACFSKEISFNN--TLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDG 351
           K  F  +    +   L+D+  + G LD A+++  +M  E   V+W +++         D 
Sbjct: 379 KKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDL 438

Query: 352 AIRLFRGMVREGIEPD---VYAITSILHA 377
           AI   + ++   +EP+    Y + S ++A
Sbjct: 439 AIYAAKKIIE--LEPEDAGTYILLSNIYA 465


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 239/619 (38%), Positives = 368/619 (59%), Gaps = 26/619 (4%)

Query: 237 CMISGYIA----------NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           C IS YI           N  +  GL V   + N     D      +L  C   G L  G
Sbjct: 51  CNISHYIIDDTNLLRPSLNPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQG 110

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           + VH   + + F  ++   N++L MY+KCG L+ A +VF++M  + VV+WTSMI GY+++
Sbjct: 111 KLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQD 170

Query: 347 GVFDGA---IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
           G    A   + LF  MVR+G+ P+ +A++S++  C   G    GK +H    +   Q ++
Sbjct: 171 GYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENV 230

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-Q 452
           +V ++L+DMYA+CG + ++  VF+++  K+ VSWN +I           AL LFV M  +
Sbjct: 231 FVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQRE 290

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
            F     T + +L + ++  +LE+G+ +H ++++ G      V N ++ MY K G +  A
Sbjct: 291 GFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDA 350

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR-QAGIEPDEVSFISVLYACSH 571
           + +FD +   D++S   M+ GY  HG G +A+  F +M     IEP++++F+SVL ACSH
Sbjct: 351 KKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSH 410

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           +GL+DEG  +F +M+ +  +EPKL HY  +VDL  R G L +A  FIE MP+ P+ATIWG
Sbjct: 411 AGLLDEGLYYFELMK-KYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWG 469

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           +LL   ++H   ++    A+ V EL+P   G + LL+N+YA A +W++V K+R+++   G
Sbjct: 470 ALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSG 529

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
           LKK P CSW+EI+  V+IF A   SHP   K+  + + L  ++K  GY P T +  +  D
Sbjct: 530 LKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVD 589

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           + EKE+ L  HSEKLA+AF +LN   G  IR+ KN+RVCGDCH   K++S   +REI++R
Sbjct: 590 QQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVR 649

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           D+NRFHHF+DG CSCR +W
Sbjct: 650 DTNRFHHFRDGSCSCRDYW 668



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 212/407 (52%), Gaps = 23/407 (5%)

Query: 151 GRRVFNKIDNGKV----FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
           G  V + I+NG +     I+N L+   +  G  K+   +   + +     D    + +L 
Sbjct: 75  GLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILF 134

Query: 207 CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK---GLEVFKEMLNLGF 263
             A  G+   ++ A ++FDE+  +DVV+W  MI+GY  +G A      L +F EM+  G 
Sbjct: 135 MYAKCGS---LEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGL 191

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             +   + +++  C   G+ + G+ +H    K  F + +   ++L+DMY++CG+L  +  
Sbjct: 192 RPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRL 251

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF+++  ++ VSW ++I+G+AR+G  + A+ LF  M REG     +  +++L + +  G 
Sbjct: 252 VFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGS 311

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-- 441
           LE GK +H ++ ++  +   YV N L+ MYAK G++ DA+ VF+++   D+VS N+M+  
Sbjct: 312 LEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIG 371

Query: 442 --------GALDLFVAMLQ--NFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                    A++LF  M+     EP+ +T   +L AC+    L+ G      + ++G+  
Sbjct: 372 YAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEP 431

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
             +    +VD++ + G+L  A+S  + +P + +   W  ++    MH
Sbjct: 432 KLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMH 478



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 188/386 (48%), Gaps = 38/386 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D   Y  +L+ C  L  L+ GK VH+ +  S    +D V+ + ++FM+  CG L+  R+V
Sbjct: 90  DRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFR-NDLVIKNSILFMYAKCGSLEIARQV 148

Query: 155 FNKIDNGKVFIWNLLMHEYSKTG---NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
           F+++    V  W  ++  YS+ G   +   +L LF +M   G+  + +  S ++KC   +
Sbjct: 149 FDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFL 208

Query: 212 GNSRRVKDAHK--------------------------------LFDELSDRDVVSWNCMI 239
           G+    K  H                                 +FDEL  ++ VSWN +I
Sbjct: 209 GSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALI 268

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           SG+   G  E+ L +F +M   GF     T   +L   +  G+L  G+ +HA  +K+   
Sbjct: 269 SGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKK 328

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG- 358
                 NTLL MY+K G++  A +VF+++ +  VVS  SM+ GYA+ G+   A+ LF   
Sbjct: 329 LVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEM 388

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M+   IEP+     S+L AC+  GLL+ G    + +K+  ++  L     ++D++ + G 
Sbjct: 389 MLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGL 448

Query: 419 MADAESVFNQMPVK-DIVSWNTMIGA 443
           +  A+S   +MP++ +   W  ++GA
Sbjct: 449 LDQAKSFIEEMPIEPNATIWGALLGA 474



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 36/314 (11%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S+++ C  L S  DGK++H    + G   ++  +GS LV M+  CG+L+E R VF+++++
Sbjct: 200 SLVKCCGFLGSCVDGKQIHGCCWKYGFQ-ENVFVGSSLVDMYARCGELRESRLVFDELES 258

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL--------------- 205
                WN L+  +++ G  +E+L LF KMQ  G  A  +T+S +L               
Sbjct: 259 KNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWL 318

Query: 206 ---------KCLAVVGN--------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                    K +  VGN        S  + DA K+FD L   DVVS N M+ GY  +G+ 
Sbjct: 319 HAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLG 378

Query: 249 EKGLEVFKE-MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
           ++ +E+F+E ML +    +  T ++VL+ C++ G L  G        K     ++S   T
Sbjct: 379 KEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTT 438

Query: 308 LLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMI-AGYAREGVFDGAIRLFRGMVREGIE 365
           ++D++ + G LD A    E+M  E +   W +++ A    +    GA    + +  +   
Sbjct: 439 VVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFY 498

Query: 366 PDVYAITSILHACA 379
           P  + + S ++A A
Sbjct: 499 PGAHTLLSNIYASA 512



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 4/151 (2%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  F   G  E+A+ +    ++        TY ++L   +   SLE GK +H+ +
Sbjct: 263 SWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHM 322

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +SG  +  G +G+ L+ M+   G++ + ++VF+++    V   N ++  Y++ G  KE+
Sbjct: 323 MKSGKKL-VGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEA 381

Query: 183 LYLFKKMQ-SLGIAADSYTFSCVLKCLAVVG 212
           + LF++M   + I  +  TF  VL   +  G
Sbjct: 382 VELFEEMMLWVEIEPNDITFLSVLTACSHAG 412


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/629 (38%), Positives = 368/629 (58%), Gaps = 21/629 (3%)

Query: 223 LFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           LF+   D+ DV SWN +I+    +G + + L  F  M  L      ++    +  C++  
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            +  G+  H  A    +  +I  ++ L+ MYS CG L+ A +VF+++ +R++VSWTSMI 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150

Query: 342 GYAREGVFDGAIRLFRGMV------REGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           GY   G    A+ LF+ ++       + +  D   + S++ AC+      + + +H ++ 
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210

Query: 396 ENDMQSSLYVSNALMDMYAKCGS--MADAESVFNQMPVKDIVSWNTMIG----------A 443
           +      + V N L+D YAK G   +A A  +F+Q+  KD VS+N+++           A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 444 LDLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
            ++F  +++N     + +T++ +L A +   AL  G+ IH  ++R G+  D  V  +I+D
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KCG +  AR  FD +  K++ SWT MIAGYGMHG    A+  F  M  +G+ P+ ++
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           F+SVL ACSH+GL  EGWR+FN M+    +EP LEHY CMVDLL R G L +AY  I+ M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
            + PD+ IW SLL  CRIH  V+LAE     +FEL+  N GYY+LL+++YA+A +W++V+
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           ++R  +  RGL K PG S +E+ G+V++F+ G   HP  +KI   L  L  ++   GY  
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            T     + DE EKE+ L  HSEKLA+AFGI+N   G T+ V KNLRVC DCH + K +S
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K   RE V+RD+ RFHHFKDG CSC  +W
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 216/439 (49%), Gaps = 55/439 (12%)

Query: 154 VFNK-IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----- 207
           +FN+ +D   VF WN ++ + +++G+  E+L  F  M+ L +     +F C +K      
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 208 ---------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                      + +     +++DA K+FDE+  R++VSW  MI 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150

Query: 241 GYIANGVAEKGLEVFKEML------NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           GY  NG A   + +FK++L      +    +D   +V+V+S C+   A     ++H+F +
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAI--RVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
           K  F + +S  NTLLD Y+K G+   A+  ++F+++ ++  VS+ S+++ YA+ G+ + A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 353 IRLFRGMVREGIEP-DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
             +FR +V+  +   +   ++++L A +  G L IGK +HD +    ++  + V  +++D
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVT 460
           MY KCG +  A   F++M  K++ SW  MI           AL+LF AM+ +   P+ +T
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 461 MACILPACASLAA-LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
              +L AC+     +E  R  +    R G+         +VD+  + G L  A  L   +
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450

Query: 520 PAK-DLISWTIMIAGYGMH 537
             K D I W+ ++A   +H
Sbjct: 451 KMKPDSIIWSSLLAACRIH 469



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 194/424 (45%), Gaps = 46/424 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I      G+  +A+    S  K  +     ++   ++ C+ L  +  GK+ H   
Sbjct: 43  SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G    D  + S L+ M+ TCG L++ R+VF++I    +  W  ++  Y   GN  ++
Sbjct: 103 FVFGYQ-SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDA 161

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD----------------------- 219
           + LFK +       D   F   +  ++V+    RV                         
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221

Query: 220 -----------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NL 261
                            A K+FD++ D+D VS+N ++S Y  +G++ +  EVF+ ++ N 
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               +  T+ TVL   ++ GAL  G+ +H   ++     ++    +++DMY KCG ++ A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            + F++M  ++V SWT+MIAGY   G    A+ LF  M+  G+ P+     S+L AC+  
Sbjct: 342 RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHA 401

Query: 382 GLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNT 439
           GL   G    + +K    ++  L     ++D+  + G +  A  +  +M +K D + W++
Sbjct: 402 GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSS 461

Query: 440 MIGA 443
           ++ A
Sbjct: 462 LLAA 465


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/749 (34%), Positives = 402/749 (53%), Gaps = 50/749 (6%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D  L + L+ ++V  GD    R++F+++ +     W  L+  Y++ G  +++  + K+M 
Sbjct: 34  DLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMI 93

Query: 191 SLGIAADSYTFSCVLKCL--------------------------AVVGNSR--------R 216
             G   + + F   ++                              VGN           
Sbjct: 94  FEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGD 153

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           +  A  +F  + D+D VSWN MI+G   N   E  ++ +  M   G       +++ LS 
Sbjct: 154 IDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSS 213

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA+ G ++ G+  H   +K     ++S +NTLL +Y++   L    +VF  M ER  VSW
Sbjct: 214 CASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSW 273

Query: 337 TSMIAGYAREGV-FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
            ++I   A  G     AI +F  M+R G  P+     ++L   +     ++   +H  I 
Sbjct: 274 NTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALIL 333

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTMIG----------AL 444
           + +++    + NAL+  Y K G M + E +F++M   +D VSWN+MI           A+
Sbjct: 334 KYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAM 393

Query: 445 DLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           DL   M+Q  +  D  T A +L ACA++A LE G E+H   +R  + +D  + +A+VDMY
Sbjct: 394 DLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMY 453

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +  A   F+++P ++L SW  MI+GY  HG G +A+  F  M+ +G  PD ++F+
Sbjct: 454 SKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFV 513

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            VL ACSH GLVDEG+ +F  M     + P++EHY+CMVDLL R G L +   FI  MP+
Sbjct: 514 GVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPI 573

Query: 624 APDATIWGSLLCGC--RIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
            P+  IW ++L  C      + +L  + AE +F ++P N   YVLL+N+YA   KWE++ 
Sbjct: 574 KPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMA 633

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           + R  +    +KK  GCSW+ +K  V++FVAG +SHP    I + LK L  +++  GY P
Sbjct: 634 RTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVP 693

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
           + ++AL + +   KE  L  HSEKLA+AF +L   +G  IR+ KNLRVCGDCH   K++S
Sbjct: 694 QIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGDCHSAFKYIS 752

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K   R IVLRDSNRFHHF+DG+CSCR +W
Sbjct: 753 KVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 215/466 (46%), Gaps = 47/466 (10%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           G++VH     +G+      +G+ L+ M+  CGD+   R VF  + +     WN ++    
Sbjct: 121 GRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLD 180

Query: 175 KTGNFKESLYLFKKMQSLGIAADSY----------TFSCVL------------------- 205
           +   F++++  +  M+  G+   ++          +  C+L                   
Sbjct: 181 QNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVS 240

Query: 206 ---KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA-EKGLEVFKEMLNL 261
                LA+   + R+ +  K+F  + +RD VSWN +I     +G +  + +EVF EM+  
Sbjct: 241 VSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRA 300

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G++ +  T + +L+  ++         +HA  LK     + +  N LL  Y K G+++  
Sbjct: 301 GWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENC 360

Query: 322 IRVFEKMGE-RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
             +F +M E R  VSW SMI+GY    +   A+ L   M++ G   D +   ++L ACA 
Sbjct: 361 EEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACAT 420

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              LE G +VH       ++S + + +AL+DMY+KCG +  A   FN MPV+++ SWN+M
Sbjct: 421 VATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSM 480

Query: 441 I----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR-HG 488
           I           AL LF  M L    PD +T   +L AC+ +  ++ G E    +   +G
Sbjct: 481 ISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYG 540

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
           +       + +VD+  + G L    +  + +P K +++ W  ++  
Sbjct: 541 LVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGA 586



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 183/369 (49%), Gaps = 18/369 (4%)

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H   LK  F  ++   NTL+++Y + GD   A ++F++M +R+ V+W  +I+GY + G+ 
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLL-EIGKDVHDY-IKENDMQSSLYVSN 407
           + A  + + M+ EG  P+ +A  S + AC    L    G+ VH Y I+     + + V N
Sbjct: 83  EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD---LFVAMLQNFE--------P 456
            L++MYAKCG +  A SVF  M  KD VSWN+MI  LD    F   ++++         P
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
               +   L +CASL  +  G++ HG  ++ G+  D +V+N ++ +Y +   L   + +F
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVF 262

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGC-DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
             +  +D +SW  +I      G    +AI  F +M +AG  P+ V+FI++L   S     
Sbjct: 263 SWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTS 322

Query: 576 DEGWRFFNM-MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
               +   + ++Y    +  +E+   ++    ++G +         M    D   W S++
Sbjct: 323 KLSHQIHALILKYNVKDDNAIEN--ALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 380

Query: 635 CGCRIHHEV 643
            G  IH+E+
Sbjct: 381 SG-YIHNEL 388



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 20/291 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  +     L KAM++++       ++D  T+ ++L  CA + +LE G +VH+  
Sbjct: 375 SWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACA 434

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             + +   D V+GS LV M+  CG +    R FN +    ++ WN ++  Y++ G+   +
Sbjct: 435 IRACLE-SDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNA 493

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-----RDVVSWNC 237
           L LF +M+  G   D  TF  VL   + +G    V +  + F  +++       V  ++C
Sbjct: 494 LRLFTRMKLSGQLPDHITFVGVLSACSHIG---LVDEGFEYFKSMTEVYGLVPRVEHYSC 550

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+      G  +K +E F   + +  N+ +    TVL  C             A  +   
Sbjct: 551 MVDLLGRAGELDK-IENFINKMPIKPNILIWR--TVLGACCRGNGRKTELGRRAAEMLFN 607

Query: 298 FSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSV-----VSWTSMIAG 342
              + + N  LL +MY+  G  +   R    M E +V      SW +M  G
Sbjct: 608 MDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDG 658


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/629 (38%), Positives = 367/629 (58%), Gaps = 21/629 (3%)

Query: 223 LFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           LF+   D+ DV SWN +I+    +G + + L  F  M  L      ++    +  C++  
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            +  G+  H  A    +  +I  ++ L+ MYS CG L+ A +VF+++ +R +VSWTSMI 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIR 150

Query: 342 GYAREGVFDGAIRLFRGMV------REGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           GY   G    A+ LF+ ++       + +  D   + S++ AC+      + + +H ++ 
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210

Query: 396 ENDMQSSLYVSNALMDMYAKCGS--MADAESVFNQMPVKDIVSWNTMIG----------A 443
           +      + V N L+D YAK G   +A A  +F+Q+  KD VS+N+++           A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 444 LDLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
            ++F  +++N     + +T++ +L A +   AL  G+ IH  ++R G+  D  V  +I+D
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KCG +  AR  FD +  K++ SWT MIAGYGMHG    A+  F  M  +G+ P+ ++
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           F+SVL ACSH+GL  EGWR+FN M+    +EP LEHY CMVDLL R G L +AY  I+ M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
            + PD+ IW SLL  CRIH  V+LAE     +FEL+  N GYY+LL+++YA+A +W++V+
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           ++R  +  RGL K PG S +E+ G+V++F+ G   HP  +KI   L  L  ++   GY  
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            T     + DE EKE+ L  HSEKLA+AFGI+N   G T+ V KNLRVC DCH + K +S
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K   RE V+RD+ RFHHFKDG CSC  +W
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 216/439 (49%), Gaps = 55/439 (12%)

Query: 154 VFNK-IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----- 207
           +FN+ +D   VF WN ++ + +++G+  E+L  F  M+ L +     +F C +K      
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 208 ---------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                      + +     +++DA K+FDE+  RD+VSW  MI 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIR 150

Query: 241 GYIANGVAEKGLEVFKEML------NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           GY  NG A   + +FK++L      +    +D   +V+V+S C+   A     ++H+F +
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAI--RVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
           K  F + +S  NTLLD Y+K G+   A+  ++F+++ ++  VS+ S+++ YA+ G+ + A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 353 IRLFRGMVREGIEP-DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
             +FR +V+  +   +   ++++L A +  G L IGK +HD +    ++  + V  +++D
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVT 460
           MY KCG +  A   F++M  K++ SW  MI           AL+LF AM+ +   P+ +T
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 461 MACILPACASLAA-LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
              +L AC+     +E  R  +    R G+         +VD+  + G L  A  L   +
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450

Query: 520 PAK-DLISWTIMIAGYGMH 537
             K D I W+ ++A   +H
Sbjct: 451 KMKPDSIIWSSLLAACRIH 469



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 194/424 (45%), Gaps = 46/424 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I      G+  +A+    S  K  +     ++   ++ C+ L  +  GK+ H   
Sbjct: 43  SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G    D  + S L+ M+ TCG L++ R+VF++I    +  W  ++  Y   GN  ++
Sbjct: 103 FVFGYQ-SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDA 161

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD----------------------- 219
           + LFK +       D   F   +  ++V+    RV                         
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221

Query: 220 -----------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NL 261
                            A K+FD++ D+D VS+N ++S Y  +G++ +  EVF+ ++ N 
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               +  T+ TVL   ++ GAL  G+ +H   ++     ++    +++DMY KCG ++ A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            + F++M  ++V SWT+MIAGY   G    A+ LF  M+  G+ P+     S+L AC+  
Sbjct: 342 RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHA 401

Query: 382 GLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNT 439
           GL   G    + +K    ++  L     ++D+  + G +  A  +  +M +K D + W++
Sbjct: 402 GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSS 461

Query: 440 MIGA 443
           ++ A
Sbjct: 462 LLAA 465


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/758 (34%), Positives = 395/758 (52%), Gaps = 98/758 (12%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL 223
            I N L+  Y K+ N   + YLF K+    I A +     +L   +  GN   +K AH+L
Sbjct: 32  LIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT----TMLSAYSAAGN---IKLAHQL 84

Query: 224 FD--ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA--- 278
           F+   +S RD VS+N MI+ +  +      L++F +M  LGF  D  T  +VL   +   
Sbjct: 85  FNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIA 144

Query: 279 ---------NCGALMFGRAVHAFALKACFSKEIS-------------------FN----- 305
                    +C    +G       L A  S  +S                   F+     
Sbjct: 145 DEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPG 204

Query: 306 -------NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
                   T++  Y +  DL  A  + E M +   V+W +MI+GY   G ++ A  L R 
Sbjct: 205 RRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRR 264

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS----LYVSNALMDMYA 414
           M   GI+ D Y  TS++ A +  GL  IG+ VH Y+    +Q S    L V+NAL+ +Y 
Sbjct: 265 MHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYT 324

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIGA------------------------------- 443
           +CG + +A  VF++MPVKD+VSWN ++                                 
Sbjct: 325 RCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISG 384

Query: 444 ----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                     L LF  M L+  EP     A  + +C+ L +L+ G+++H  I++ G  + 
Sbjct: 385 LAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSS 444

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
            +V NA++ MY +CG++  A ++F  +P  D +SW  MIA    HG G  AI  +  M +
Sbjct: 445 LSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLK 504

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
             I PD ++F+++L ACSH+GLV EG  +F+ MR    I P+ +HY+ ++DLL R G  S
Sbjct: 505 EDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFS 564

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           EA    E MP  P A IW +LL GC IH  ++L  + A+ + EL P   G Y+ L+N+YA
Sbjct: 565 EAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYA 624

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
              +W+EV ++R+ +  RG+KK PGCSWIE++  V++F+   + HP    +   L++L  
Sbjct: 625 ALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVH 684

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
           EM++ GY P T++ L + +  +KE AL  HSEKLA+ +GI+ LP G TIRV KNLR+CGD
Sbjct: 685 EMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGD 744

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CH   K++SK   REI++RD  RFHHF++G CSC  +W
Sbjct: 745 CHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 178/380 (46%), Gaps = 58/380 (15%)

Query: 66  YNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  +   G  E+A ++L    S   ++D  TY S++   ++      G++VH+ + 
Sbjct: 242 WNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVL 301

Query: 124 ESGIVIDDG----VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
            + +V   G     + + L+ ++  CG L E RRVF+K+    +  WN ++         
Sbjct: 302 RT-VVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILS-------- 352

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMI 239
                                  CV        N+RR+++A+ +F E+  R +++W  MI
Sbjct: 353 ----------------------GCV--------NARRIEEANSIFREMPVRSLLTWTVMI 382

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           SG   NG  E+GL++F +M   G           ++ C+  G+L  G+ +H+  ++    
Sbjct: 383 SGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHD 442

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
             +S  N L+ MYS+CG ++ A  VF  M     VSW +MIA  A+ G    AI+L+  M
Sbjct: 443 SSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKM 502

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-------ENDMQSSLYVSNALMDM 412
           ++E I PD     +IL AC+  GL++ G+   D ++       E D  S       L+D+
Sbjct: 503 LKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSR------LIDL 556

Query: 413 YAKCGSMADAESVFNQMPVK 432
             + G  ++A++V   MP +
Sbjct: 557 LCRAGMFSEAKNVTESMPFE 576



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 203/510 (39%), Gaps = 130/510 (25%)

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           F RAVHA  L + F       N L+D Y K  ++  A  +F+K+ +  +V+ T+M++ Y+
Sbjct: 14  FARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYS 73

Query: 345 REG-------------------------------VFDG--AIRLFRGMVREGIEPDVYAI 371
             G                                 DG  A++LF  M R G  PD +  
Sbjct: 74  AAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTF 133

Query: 372 TSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGS---------MAD 421
           +S+L A +     E   + +H  + +    S   V NALM  Y  C S         MA 
Sbjct: 134 SSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAA 193

Query: 422 AESVFNQMP----------------VKD-----------------IVSWNTMIG------ 442
           A  +F++ P                V++                  V+WN MI       
Sbjct: 194 ARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRG 253

Query: 443 ----ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD----R 493
               A DL   M     + D  T   ++ A ++      GR++H Y+LR  +        
Sbjct: 254 FYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVL 313

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS--------------------------- 526
           +V NA++ +Y +CG LV AR +FD +P KDL+S                           
Sbjct: 314 SVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVR 373

Query: 527 ----WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
               WT+MI+G   +GFG + +  FN M+  G+EP + ++   + +CS  G +D G +  
Sbjct: 374 SLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLH 433

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH-- 640
           + +  +   +  L     ++ + SR G +  A      MP   D+  W +++     H  
Sbjct: 434 SQI-IQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYV-DSVSWNAMIAALAQHGH 491

Query: 641 --HEVKLAEKVAEHVFELEPDNTGYYVLLA 668
               ++L EK+ +   ++ PD   +  +L+
Sbjct: 492 GVQAIQLYEKMLKE--DILPDRITFLTILS 519



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 2/118 (1%)

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A L+     R +H +IL  G      + N ++D Y K   +  AR LFD IP  D+++ T
Sbjct: 7   AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
            M++ Y   G    A   FN    +    D VS+ +++ A SHS       + F  M+
Sbjct: 67  TMLSAYSAAGNIKLAHQLFNATPMS--IRDTVSYNAMITAFSHSHDGHAALQLFVQMK 122


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/645 (38%), Positives = 379/645 (58%), Gaps = 30/645 (4%)

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
           DS T++ ++   A   N   V  A   FD   ++D VSWN M++ Y+ NG  E+   +F 
Sbjct: 5   DSVTYNVMISSHA---NHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF- 60

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
              N     D+ +   ++SG    G +   R +          +++   N ++  Y++ G
Sbjct: 61  ---NSRTEWDVISWNALMSGYVQWGKMSEAREL----FDRMPGRDVVSWNIMVSGYARRG 113

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
           D+  A R+F+    R V +WT++++GYA+ G+ + A R+F  M     E +  +  +++ 
Sbjct: 114 DMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVA 169

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
           A     +++  K++ + +   ++ S     N ++  YA+ G + +A++VF+ MP KD VS
Sbjct: 170 AYIQRRMMDEAKELFNMMPCRNVAS----WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS 225

Query: 437 WNTMIGA----------LDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYIL 485
           W  M+ A          L LF+ M +  E  +    AC+L  CA +AALE G ++HG ++
Sbjct: 226 WAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLI 285

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
           R G      V NA++ MY KCG +  AR+ F+ +  +D++SW  MIAGY  HGFG +A+ 
Sbjct: 286 RAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALE 345

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLL 605
            F+ MR    +PD+++ + VL ACSHSGLV++G  +F  M ++  +  K EHY CM+DLL
Sbjct: 346 IFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLL 405

Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV 665
            R G L+EA+  ++ MP  PD+T+WG+LL   RIH   +L    AE +FELEP+N G YV
Sbjct: 406 GRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYV 465

Query: 666 LLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIES 725
           LL+N+YA + KW + +K+R  +  RG+KK PG SWIE++ KV+ F AG   HP  +KI +
Sbjct: 466 LLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYA 525

Query: 726 LLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTK 785
            L+ L + MK+ GY   T   L + +E EKE  L  HSEKLA+A+GILN+P G+ IRV K
Sbjct: 526 FLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIK 585

Query: 786 NLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           NLRVCGDCH   K++S    R I+LRDSNRFHHF+ G CSC  +W
Sbjct: 586 NLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 198/423 (46%), Gaps = 34/423 (8%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D V  + ++  +V  G ++E R +FN      V  WN LM  Y + G   E+  LF +M 
Sbjct: 36  DAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMP 95

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
              +         V   + V G +RR  + +A +LFD    RDV +W  ++SGY  NG+ 
Sbjct: 96  GRDV---------VSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGML 146

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           E+   VF  M      V    MV      A     M   A   F +  C  + ++  NT+
Sbjct: 147 EEARRVFDAMPERN-AVSWNAMVA-----AYIQRRMMDEAKELFNMMPC--RNVASWNTM 198

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           L  Y++ G L+ A  VF+ M ++  VSW +M+A Y++ G  +  ++LF  M R G   + 
Sbjct: 199 LTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNR 258

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
            A   +L  CA    LE G  +H  +         +V NAL+ MY KCG+M DA + F +
Sbjct: 259 SAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEE 318

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERG 477
           M  +D+VSWNTMI           AL++F  M   + +PD +T+  +L AC+    +E+G
Sbjct: 319 MEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 378

Query: 478 REIHGYILRH--GISADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGY 534
              + Y + H  G++A       ++D+  + G L  A  L  DM    D   W  ++   
Sbjct: 379 IS-YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGAS 437

Query: 535 GMH 537
            +H
Sbjct: 438 RIH 440



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 28/272 (10%)

Query: 429 MPVKDIVSWNTMIG--ALDLFVAMLQNF-----EPDGVTMACILPACASLAALERGREIH 481
           MPV+D V++N MI   A    V++ +++     E D V+   +L A      +E  R   
Sbjct: 1   MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARG-- 58

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
             +       D    NA++  YV+ G +  AR LFD +P +D++SW IM++GY   G   
Sbjct: 59  --LFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMV 116

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
           +A   F+    A    D  ++ +V+   + +G+++E  R F+ M      E     +  M
Sbjct: 117 EARRLFD----AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM-----PERNAVSWNAM 167

Query: 602 VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP--D 659
           V    +   + EA     MMP    A+ W ++L G   + +  + E+ A+ VF+  P  D
Sbjct: 168 VAAYIQRRMMDEAKELFNMMPCRNVAS-WNTMLTG---YAQAGMLEE-AKAVFDTMPQKD 222

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
              +  +LA  Y++    EE  +L  ++ R G
Sbjct: 223 AVSWAAMLA-AYSQGGCSEETLQLFIEMGRCG 253



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 1/112 (0%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           ++   +  +L  CAD+ +LE G ++H  +  +G  +    +G+ L+ M+  CG++++ R 
Sbjct: 256 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG-CFVGNALLAMYFKCGNMEDARN 314

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
            F +++   V  WN ++  Y++ G  KE+L +F  M++     D  T   VL
Sbjct: 315 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVL 366


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/712 (37%), Positives = 390/712 (54%), Gaps = 51/712 (7%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VFN +       +N ++  Y +   F  +  LF +M    +      FS  +     V N
Sbjct: 71  VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDL------FSWNVMLTGYVRN 124

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML---NLGFNVDLATM 270
            R + DA +LFD + ++DVVSWN ++SGY  NG  ++  EVF  M    ++ +N  LA  
Sbjct: 125 CR-LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAY 183

Query: 271 V---TVLSGCA-------------NCGALMFGRAVHAFALKACFSK-----EISFNNTLL 309
           V    +   C              NC    F R       +  F K      IS+N T++
Sbjct: 184 VHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN-TMI 242

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
             Y++ G L  A R+F++   R V +WT+M++GY + G+ D A   F  M     E +  
Sbjct: 243 SGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEV 298

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           +  +++        ++I +++ + +   ++ S     N ++  Y + G +A A   F+ M
Sbjct: 299 SYNAMIAGYVQTKKMDIARELFESMPCRNISSW----NTMITGYGQIGDIAQARKFFDMM 354

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGR 478
           P +D VSW  +I           AL++FV + Q+ E  +  T  C L  CA +AALE G+
Sbjct: 355 PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGK 414

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           +IHG  ++ G      V NA++ MY KCG +  A   F+ I  KD++SW  M+AGY  HG
Sbjct: 415 QIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHG 474

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
           FG  A+  F  M+ AG++PDE++ + VL ACSH+GL+D G  +F  M  +  + P  +HY
Sbjct: 475 FGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY 534

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
            CM+DLL R G L EA   I  MP  P A  WG+LL   RIH   +L EK AE VF++EP
Sbjct: 535 TCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEP 594

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
            N+G YVLL+N+YA + +W +  K+R K+   G++K PG SW+E++ K++ F  G  SHP
Sbjct: 595 QNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHP 654

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
             ++I + L+ L L+M+ EGY   T+  L + +E EKE  L  HSEKLA+AFGIL +P G
Sbjct: 655 EKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGG 714

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           + IRV KNLRVC DCH   K +SK   R I+LRDS+RFHHF +G CSC  +W
Sbjct: 715 RPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 208/470 (44%), Gaps = 62/470 (13%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           L D +++  ++ E  +V  + +L       +   G + E R VF+ +       WN L+ 
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSG-----YAQNGYVDEAREVFDNMPEKNSISWNGLLA 181

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD 231
            Y   G  +E+  LF+         D  +++C++         +++ DA  LFD++  RD
Sbjct: 182 AYVHNGRIEEACLLFESKSDW----DLISWNCLMGGFV---RKKKLGDARWLFDKMPVRD 234

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
            +SWN MISGY   G    GL   + + +     D+ T   ++SG    G L        
Sbjct: 235 AISWNTMISGYAQGG----GLSQARRLFDESPTRDVFTWTAMVSGYVQNGML---DEAKT 287

Query: 292 FALKACFSKEISFN------------------------------NTLLDMYSKCGDLDGA 321
           F  +     E+S+N                              NT++  Y + GD+  A
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQA 347

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            + F+ M +R  VSW ++IAGYA+ G ++ A+ +F  + ++G   +       L  CA  
Sbjct: 348 RKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADI 407

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             LE+GK +H    +    +  +V NAL+ MY KCGS+ +A   F  +  KD+VSWNTM+
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467

Query: 442 G----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGRE-IHGYILRHGI 489
                      AL +F +M     +PD +TM  +L AC+    L+RG E  +     +G+
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD-LISWTIMIAGYGMHG 538
                    ++D+  + G L  A+ L   +P +    SW  ++    +HG
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHG 577



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 192/408 (47%), Gaps = 39/408 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           ++N  +  +   G +E+A  +L+ S KS  D  ++  ++      K L D + +      
Sbjct: 175 SWNGLLAAYVHNGRIEEAC-LLFES-KSDWDLISWNCLMGGFVRKKKLGDARWLFD---- 228

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
             + + D +  + ++  +   G L + RR+F++     VF W  ++  Y + G   E+  
Sbjct: 229 -KMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287

Query: 185 LFKKM------------------QSLGIAADSY---------TFSCVLKCLAVVGNSRRV 217
            F +M                  + + IA + +         +++ ++     +G+   +
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGD---I 344

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
             A K FD +  RD VSW  +I+GY  +G  E+ L +F E+   G +++ AT    LS C
Sbjct: 345 AQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTC 404

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A+  AL  G+ +H  A+K  +       N LL MY KCG +D A   FE + E+ VVSW 
Sbjct: 405 ADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWN 464

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD-VHDYIKE 396
           +M+AGYAR G    A+ +F  M   G++PD   +  +L AC+  GLL+ G +  +   K+
Sbjct: 465 TMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKD 524

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD-IVSWNTMIGA 443
             +  +      ++D+  + G + +A+ +   MP +    SW  ++GA
Sbjct: 525 YGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGA 572



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 158/339 (46%), Gaps = 31/339 (9%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N  +  + + G  D A+ VF  M  RS VS+ +MI+GY R   F+ A  LF  M     E
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP----E 108

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
            D+++   +L     +  L   + + D + E D+ S     N+L+  YA+ G + +A  V
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVS----WNSLLSGYAQNGYVDEAREV 164

Query: 426 FNQMPVKDIVSWNTMIGAL-------DLFVAMLQNFEPDGVTMACILPACASLAALERGR 478
           F+ MP K+ +SWN ++ A        +  +      + D ++  C++        L   R
Sbjct: 165 FDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDAR 224

Query: 479 EIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
            +   + +R  IS      N ++  Y + G L  AR LFD  P +D+ +WT M++GY  +
Sbjct: 225 WLFDKMPVRDAIS-----WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQN 279

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G   +A   F++M     E +EVS+ +++     +  +D     F  M   C     +  
Sbjct: 280 GMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESM--PCR---NISS 330

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           +  M+    + G++++A +F +MMP   D   W +++ G
Sbjct: 331 WNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAG 368



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 135/317 (42%), Gaps = 68/317 (21%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           GD+ + R+ F+ +       W  ++  Y+++G+++E+L +F +++  G + +  TF C L
Sbjct: 342 GDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCAL 401

Query: 206 KCLA------------------------VVGNS--------RRVKDAHKLFDELSDRDVV 233
              A                         VGN+          + +A+  F+ + ++DVV
Sbjct: 402 STCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVV 461

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           SWN M++GY  +G   + L VF+ M   G   D  TMV VLS C++ G L   R    F 
Sbjct: 462 SWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLL--DRGTEYF- 518

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
                             YS   D  G I   +         +T MI    R G  + A 
Sbjct: 519 ------------------YSMTKDY-GVIPTSKH--------YTCMIDLLGRAGRLEEAQ 551

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS-LYVSNALMDM 412
            L R M     +P   +  ++L A    G  E+G+   + + + + Q+S +YV   L ++
Sbjct: 552 DLIRNMP---FQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYV--LLSNL 606

Query: 413 YAKCGSMADAESVFNQM 429
           YA  G   DA+ + ++M
Sbjct: 607 YAASGRWVDADKMRSKM 623



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 22/233 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G+ E+A+ +      +   ++  T+   L  CAD+ +LE GK++H   
Sbjct: 361 SWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQA 420

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G       +G+ L+ M+  CG + E    F  I+   V  WN ++  Y++ G  +++
Sbjct: 421 VKMGYGTG-CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQA 479

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS----WNCM 238
           L +F+ M++ G+  D  T   VL   +  G   R       +    D  V+     + CM
Sbjct: 480 LTVFESMKTAGVKPDEITMVGVLSACSHTGLLDR--GTEYFYSMTKDYGVIPTSKHYTCM 537

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           I      G  E+  ++ + M                 G A+ GAL+    +H 
Sbjct: 538 IDLLGRAGRLEEAQDLIRNM-------------PFQPGAASWGALLGASRIHG 577


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/712 (37%), Positives = 390/712 (54%), Gaps = 51/712 (7%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VFN +       +N ++  Y +   F  +  LF +M    +      FS  +     V N
Sbjct: 71  VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDL------FSWNVMLTGYVRN 124

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML---NLGFNVDLATM 270
            R + DA +LFD + ++DVVSWN ++SGY  NG  ++  EVF  M    ++ +N  LA  
Sbjct: 125 CR-LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAY 183

Query: 271 V---TVLSGCA-------------NCGALMFGRAVHAFALKACFSK-----EISFNNTLL 309
           V    +   C              NC    F R       +  F K      IS+N T++
Sbjct: 184 VHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN-TMI 242

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
             Y++ G L  A R+F++   R V +WT+M++GY + G+ D A   F  M     E +  
Sbjct: 243 SGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEV 298

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           +  +++        ++I +++ + +   ++ S     N ++  Y + G +A A   F+ M
Sbjct: 299 SYNAMIAGYVQTKKMDIARELFESMPCRNISSW----NTMITGYGQIGDIAQARKFFDMM 354

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGR 478
           P +D VSW  +I           AL++FV + Q+ E  +  T  C L  CA +AALE G+
Sbjct: 355 PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGK 414

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           +IHG  ++ G      V NA++ MY KCG +  A   F+ I  KD++SW  M+AGY  HG
Sbjct: 415 QIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHG 474

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
           FG  A+  F  M+ AG++PDE++ + VL ACSH+GL+D G  +F  M  +  + P  +HY
Sbjct: 475 FGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY 534

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
            CM+DLL R G L EA   I  MP  P A  WG+LL   RIH   +L EK AE VF++EP
Sbjct: 535 TCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEP 594

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
            N+G YVLL+N+YA + +W +  K+R K+   G++K PG SW+E++ K++ F  G  SHP
Sbjct: 595 QNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHP 654

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
             ++I + L+ L L+M+ EGY   T+  L + +E EKE  L  HSEKLA+AFGIL +P G
Sbjct: 655 EKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGG 714

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           + IRV KNLRVC DCH   K +SK   R I+LRDS+RFHHF +G CSC  +W
Sbjct: 715 RPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 208/470 (44%), Gaps = 62/470 (13%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           L D +++  ++ E  +V  + +L       +   G + E R VF+ +       WN L+ 
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSG-----YAQNGYVDEAREVFDNMPEKNSISWNGLLA 181

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD 231
            Y   G  +E+  LF+         D  +++C++         +++ DA  LFD++  RD
Sbjct: 182 AYVHNGRIEEACLLFESKSDW----DLISWNCLMGGFV---RKKKLGDARWLFDKMPVRD 234

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
            +SWN MISGY   G    GL   + + +     D+ T   ++SG    G L        
Sbjct: 235 AISWNTMISGYAQGG----GLSQARRLFDESPTRDVFTWTAMVSGYVQNGML---DEAKT 287

Query: 292 FALKACFSKEISFN------------------------------NTLLDMYSKCGDLDGA 321
           F  +     E+S+N                              NT++  Y + GD+  A
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQA 347

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            + F+ M +R  VSW ++IAGYA+ G ++ A+ +F  + ++G   +       L  CA  
Sbjct: 348 RKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADI 407

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             LE+GK +H    +    +  +V NAL+ MY KCGS+ +A   F  +  KD+VSWNTM+
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467

Query: 442 G----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGRE-IHGYILRHGI 489
                      AL +F +M     +PD +TM  +L AC+    L+RG E  +     +G+
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD-LISWTIMIAGYGMHG 538
                    ++D+  + G L  A+ L   +P +    SW  ++    +HG
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHG 577



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 192/408 (47%), Gaps = 39/408 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           ++N  +  +   G +E+A  +L+ S KS  D  ++  ++      K L D + +      
Sbjct: 175 SWNGLLAAYVHNGRIEEAC-LLFES-KSDWDLISWNCLMGGFVRKKKLGDARWLFD---- 228

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
             + + D +  + ++  +   G L + RR+F++     VF W  ++  Y + G   E+  
Sbjct: 229 -KMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287

Query: 185 LFKKM------------------QSLGIAADSY---------TFSCVLKCLAVVGNSRRV 217
            F +M                  + + IA + +         +++ ++     +G+   +
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGD---I 344

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
             A K FD +  RD VSW  +I+GY  +G  E+ L +F E+   G +++ AT    LS C
Sbjct: 345 AQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTC 404

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A+  AL  G+ +H  A+K  +       N LL MY KCG +D A   FE + E+ VVSW 
Sbjct: 405 ADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWN 464

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD-VHDYIKE 396
           +M+AGYAR G    A+ +F  M   G++PD   +  +L AC+  GLL+ G +  +   K+
Sbjct: 465 TMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKD 524

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD-IVSWNTMIGA 443
             +  +      ++D+  + G + +A+ +   MP +    SW  ++GA
Sbjct: 525 YGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGA 572



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 116/261 (44%), Gaps = 57/261 (21%)

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
           ++GL+D G  +F  M  E ++ P  +HY CM+DLL R   L E                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
           G+LL   RIH   +L EK A+  F++ P N+G                 + K+R+     
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSG-----------------ISKMRDV---- 857

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           G++K PG SW E++ K++ F  G       + I   L+ L L+M+      +     +  
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELDLKMREREEEKERTLKYL-- 914

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRV-TKNLRVCGDCHEMAKFMSKTARREIV 809
                       SE LA A GIL +P G+  RV  K + VC DC    K MSK   R I 
Sbjct: 915 ------------SENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLIT 962

Query: 810 LRDSNRFHHFKDGRCSCRGFW 830
           LRDS   H F +  CSC  +W
Sbjct: 963 LRDS---HRFNESICSCGEYW 980



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 158/339 (46%), Gaps = 31/339 (9%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N  +  + + G  D A+ VF  M  RS VS+ +MI+GY R   F+ A  LF  M     E
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP----E 108

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
            D+++   +L     +  L   + + D + E D+ S     N+L+  YA+ G + +A  V
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVS----WNSLLSGYAQNGYVDEAREV 164

Query: 426 FNQMPVKDIVSWNTMIGAL-------DLFVAMLQNFEPDGVTMACILPACASLAALERGR 478
           F+ MP K+ +SWN ++ A        +  +      + D ++  C++        L   R
Sbjct: 165 FDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDAR 224

Query: 479 EIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
            +   + +R  IS      N ++  Y + G L  AR LFD  P +D+ +WT M++GY  +
Sbjct: 225 WLFDKMPVRDAIS-----WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQN 279

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G   +A   F++M     E +EVS+ +++     +  +D     F  M   C     +  
Sbjct: 280 GMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESM--PCR---NISS 330

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           +  M+    + G++++A +F +MMP   D   W +++ G
Sbjct: 331 WNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAG 368



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 135/317 (42%), Gaps = 68/317 (21%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           GD+ + R+ F+ +       W  ++  Y+++G+++E+L +F +++  G + +  TF C L
Sbjct: 342 GDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCAL 401

Query: 206 KCLA------------------------VVGNS--------RRVKDAHKLFDELSDRDVV 233
              A                         VGN+          + +A+  F+ + ++DVV
Sbjct: 402 STCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVV 461

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           SWN M++GY  +G   + L VF+ M   G   D  TMV VLS C++ G L   R    F 
Sbjct: 462 SWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLL--DRGTEYF- 518

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
                             YS   D  G I   +         +T MI    R G  + A 
Sbjct: 519 ------------------YSMTKDY-GVIPTSKH--------YTCMIDLLGRAGRLEEAQ 551

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS-LYVSNALMDM 412
            L R M     +P   +  ++L A    G  E+G+   + + + + Q+S +YV   L ++
Sbjct: 552 DLIRNMP---FQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYV--LLSNL 606

Query: 413 YAKCGSMADAESVFNQM 429
           YA  G   DA+ + ++M
Sbjct: 607 YAASGRWVDADKMRSKM 623



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 22/233 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G+ E+A+ +      +   ++  T+   L  CAD+ +LE GK++H   
Sbjct: 361 SWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQA 420

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G       +G+ L+ M+  CG + E    F  I+   V  WN ++  Y++ G  +++
Sbjct: 421 VKMGYGTG-CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQA 479

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS----WNCM 238
           L +F+ M++ G+  D  T   VL   +  G   R       +    D  V+     + CM
Sbjct: 480 LTVFESMKTAGVKPDEITMVGVLSACSHTGLLDR--GTEYFYSMTKDYGVIPTSKHYTCM 537

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           I      G  E+  ++ + M                 G A+ GAL+    +H 
Sbjct: 538 IDLLGRAGRLEEAQDLIRNM-------------PFQPGAASWGALLGASRIHG 577


>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/571 (43%), Positives = 341/571 (59%), Gaps = 37/571 (6%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE--------RSVV 334
           L  G  VHA  L           + ++  Y+  GD+D ++ VF  +G+        +S V
Sbjct: 86  LKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGDYFTFPFVLKSSV 145

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
              S+  G    G+          ++R G++ D+Y  TS++      G +     V D +
Sbjct: 146 ELLSVWMGKCVHGL----------ILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM 195

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
              D+ S     NAL+  Y K G +  A ++F +MP ++IVSW TMI           AL
Sbjct: 196 TIRDVSSW----NALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQAL 251

Query: 445 DLFVAMLQ---NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
            LF  M++      P+ VT+  +LPACA L+ LERGR+IH    R G++++ +V  A+  
Sbjct: 252 SLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTA 311

Query: 502 MYVKCGVLVLARSLFDMIP--AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           MY KCG LV AR+ FD +    K+LI+W  MI  Y  +G G  A++TF +M QAGI+PD+
Sbjct: 312 MYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDD 371

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           ++F  +L  CSHSGLVD G ++FN M    +I P++EHYAC+ DLL R G L+EA + + 
Sbjct: 372 ITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVG 431

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP+    +IWGSLL  CR H  +++AE  A  +F LEP+NTG YVLL+N+YAEA +W+E
Sbjct: 432 EMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQE 491

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V KLR  +  +G KK+PGCSWIEI GK ++F+ G +SHP  K+I   L+ L  +MK  GY
Sbjct: 492 VDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGY 551

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
           FP T Y L +  E EKE  L  HSEKLA+AFGILN PA   +RVTKNLR+CGDCH    F
Sbjct: 552 FPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVF 611

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +S+   RE+++RD NRFHHFK G CSC  +W
Sbjct: 612 ISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 173/361 (47%), Gaps = 57/361 (15%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  +L+   +L S+  GK VH +I   G+  D  V  + L+ ++  CG++ +  +V
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYV-ATSLIILYGKCGEINDAGKV 191

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+ +    V  WN L+  Y+K+G                         C+   LA+    
Sbjct: 192 FDNMTIRDVSSWNALLAGYTKSG-------------------------CIDAALAI---- 222

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVT 272
                    F+ +  R++VSW  MISGY  +G+A++ L +F EM+  + G   +  T+++
Sbjct: 223 ---------FERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMS 273

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM--GE 330
           VL  CA    L  GR +H  A +   +   S    L  MY+KCG L  A   F+K+   E
Sbjct: 274 VLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNE 333

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +++++W +MI  YA  G    A+  FR M++ GI+PD    T +L  C+  GL+++G   
Sbjct: 334 KNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG--- 390

Query: 391 HDYIKENDMQSSLYVSNALMDMYA-------KCGSMADAESVFNQMPVKDIVS-WNTMIG 442
              +K  +  S+ Y  N  ++ YA       + G +A+A  +  +MP+    S W +++ 
Sbjct: 391 ---LKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLA 447

Query: 443 A 443
           A
Sbjct: 448 A 448



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 155/348 (44%), Gaps = 54/348 (15%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           AH L   L    +V  + M++ Y ++G  +  + VF     +G   D  T   VL     
Sbjct: 94  AHMLLRGLQPTALVG-SKMVAFYASSGDIDSSVSVFN---GIG---DYFTFPFVLKSSVE 146

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             ++  G+ VH   L+     ++    +L+ +Y KCG+++ A +VF+ M  R V SW ++
Sbjct: 147 LLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNAL 206

Query: 340 IAGYAREGVFDG-------------------------------AIRLFRGMVRE--GIEP 366
           +AGY + G  D                                A+ LF  MV+E  G+ P
Sbjct: 207 LAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRP 266

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           +   I S+L ACA    LE G+ +H+      + S+  V  AL  MYAKCGS+ DA + F
Sbjct: 267 NWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCF 326

Query: 427 NQMPV--KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAA 473
           +++    K++++WNTMI           A+  F  M+Q   +PD +T   +L  C+    
Sbjct: 327 DKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGL 386

Query: 474 LERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           ++ G +   ++   + I+        + D+  + G L  A  L   +P
Sbjct: 387 VDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMP 434


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/613 (38%), Positives = 356/613 (58%), Gaps = 12/613 (1%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLN-LGFNVDLATMVTVLSGCANCGALMFGRA 288
           R   S+N +I  ++  G  E  L +F EML+    + D  T+   +  C+    L  GR 
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           V A+A K  F  +    N+L+ MY+ CGD+  A  +F  +  + V++W +MIAGY + G 
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGD 252

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
           +   + +F+GM+      D   + S+  AC   G   +G+ + +Y +E  M  S  ++ A
Sbjct: 253 WKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATA 312

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPD 457
           L+DMYAKCG +  A  +F++M  +D+V+W+ MI           AL +F  M      P+
Sbjct: 313 LVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPN 372

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
            VTM  +L ACA L ALE G+ +H YI R  +     +  A+VD Y KCG +  A   F+
Sbjct: 373 DVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFE 432

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            +P ++  +WT +I G   +G   +A+  F+ M +A IEP +V+FI VL ACSH  LV+E
Sbjct: 433 SMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEE 492

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           G R F  M  +  I P++EHY CMVDLL R G + EAY+FI  MP+ P+A +W +LL  C
Sbjct: 493 GRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSAC 552

Query: 638 RIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPG 697
            +H  V++ E+  + +  L+P ++G Y+LL+N YA   +W+    +R+++  +G++K PG
Sbjct: 553 TVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPG 612

Query: 698 CSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEV 757
           CS IE++G +  F A  S HP   +I   +  +   +K  GY P T  A ++ DE EK+V
Sbjct: 613 CSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEKQV 672

Query: 758 ALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFH 817
           ++  HSEKLA+AFG++    G TIR++KNLRVC DCH   K +SK   REI++RD NRFH
Sbjct: 673 SVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNRFH 732

Query: 818 HFKDGRCSCRGFW 830
           HFKDG CSC  +W
Sbjct: 733 HFKDGLCSCNDYW 745



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 192/367 (52%), Gaps = 20/367 (5%)

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
           Y FK+    G   D +  + ++   A  G+   V  AH LF  +  + V++WN MI+GY+
Sbjct: 196 YAFKR----GFMVDQFVLNSLIHMYASCGD---VVAAHVLFHTVQVKGVIAWNAMIAGYV 248

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            NG  ++ +E+FK ML +    D  T+++V + C   G    G+ +  +A +    +  +
Sbjct: 249 KNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRN 308

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               L+DMY+KCG+LD A R+F++M  R VV+W++MI+GY +      A+ +F  M    
Sbjct: 309 LATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTE 368

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           + P+   + S+L ACA  G LE GK VH YI+  D+  ++ +  AL+D YAKCG + DA 
Sbjct: 369 VNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAV 428

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLA 472
             F  MPV++  +W  +I           AL+LF +ML+ N EP  VT   +L AC+   
Sbjct: 429 KAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGC 488

Query: 473 ALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIM 530
            +E GR     + + +GI         +VD+  + G++  A      +P + + + W  +
Sbjct: 489 LVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRAL 548

Query: 531 IAGYGMH 537
           ++   +H
Sbjct: 549 LSACTVH 555



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 188/417 (45%), Gaps = 38/417 (9%)

Query: 64  KNYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++YN  I  F   G+ E A+ +   +        D  T  + ++ C+ +  L  G+ V +
Sbjct: 136 RSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQA 195

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              + G ++D  VL S L+ M+ +CGD+     +F+ +    V  WN ++  Y K G++K
Sbjct: 196 YAFKRGFMVDQFVLNS-LIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWK 254

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------------------------- 215
           E + +FK M  +    D  T   V      +G++                          
Sbjct: 255 EVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALV 314

Query: 216 -------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   +  A +LFD +  RDVV+W+ MISGY  +    + L +F EM     N +  
Sbjct: 315 DMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDV 374

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           TMV+VLS CA  GAL  G+ VH++  +      +     L+D Y+KCG +  A++ FE M
Sbjct: 375 TMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESM 434

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG- 387
             R+  +WT++I G A  G    A+ LF  M+   IEP       +L AC+   L+E G 
Sbjct: 435 PVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGR 494

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           +      ++  +   +     ++D+  + G + +A      MP++ + V W  ++ A
Sbjct: 495 RHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSA 551



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/404 (23%), Positives = 162/404 (40%), Gaps = 71/404 (17%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  + + G+ ++ +E+       ++  D  T  S+   C  L     G+ +     
Sbjct: 240 WNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAE 299

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           E G++     L + LV M+  CG+L + RR+F+++ +  V  W+ ++  Y+++   +E+L
Sbjct: 300 EKGMLRSRN-LATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREAL 358

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGN----------SRR----------------- 216
            +F +MQ   +  +  T   VL   AV+G            RR                 
Sbjct: 359 AIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFY 418

Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                +KDA K F+ +  R+  +W  +I G  +NG + + LE+F  ML         T +
Sbjct: 419 AKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFI 478

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
            VL  C++   +  GR                F +   D Y  C  ++            
Sbjct: 479 GVLLACSHGCLVEEGRR--------------HFTSMTQD-YGICPRIE------------ 511

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
               +  M+    R G+ D A +  R M    IEP+     ++L AC     +EIG++  
Sbjct: 512 ---HYGCMVDLLGRAGLIDEAYQFIRNM---PIEPNAVVWRALLSACTVHKNVEIGEEAL 565

Query: 392 DYIKENDM-QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
             I   D   S  Y+   L + YA  G   +A  V  +M  K +
Sbjct: 566 KQIVPLDPCHSGNYI--LLSNTYASVGQWKNAAMVRKEMKEKGV 607


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/712 (35%), Positives = 391/712 (54%), Gaps = 51/712 (7%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
            ++ N L+  Y K G    +  +F  M    +    +T++ +L  LA   ++R + D   
Sbjct: 41  TYLLNHLLTAYGKAGRHARARRVFDAMPHPNL----FTYNALLSTLA---HARLLSDMEA 93

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA--TMVTVLSGCANC 280
           LF  ++ RD+VS+N +I+G+   G   + + V+  +L    +V  +  TM T++   +  
Sbjct: 94  LFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASAL 153

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSK-------------------------- 314
           G    G+  H   L+  F       + L+DMY+K                          
Sbjct: 154 GDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMI 213

Query: 315 -----CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
                C  ++ A R+FE M +R  ++WT+M+ G+ + G+   A+ +FR M  +GI  D Y
Sbjct: 214 TGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQY 273

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
              SIL AC     LE GK +H YI       +++V +AL+DMY+KC S+  AE+VF +M
Sbjct: 274 TFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRM 333

Query: 430 PVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGR 478
             K+I+SW  +I           A+ +F  M ++  +PD  T+  ++ +CA+LA+LE G 
Sbjct: 334 TCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGA 393

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           + H   L  G+     V+NA+V +Y KCG +  A  LFD +   D +SWT +++GY   G
Sbjct: 394 QFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFG 453

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
              + I  F  M   G++PD V+FI VL ACS +G V++G  +F+ M+ +  I P  +HY
Sbjct: 454 RAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHY 513

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
            CM+DL SR+G L EA  FI+ MP+ PDA  WG+LL  CR+  ++++ +  AE++ E++P
Sbjct: 514 TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDP 573

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
            N   YVLL +++A   +W EV +LR  +  R +KK PGCSWI+ K KV+IF A   SHP
Sbjct: 574 QNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHP 633

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
            +K I   L+ L  +M  EGY P     L +  + +K   +  HSEKLA+AFG++ +P  
Sbjct: 634 CSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQE 693

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             IR+ KNLRVC DCH   KF+SK   R+I++RD+ RFH F DG CSC  FW
Sbjct: 694 MPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 211/451 (46%), Gaps = 70/451 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCAD-LKSLEDGKKVHS 120
           +YNA I  F   G+  +A+ V   L  ++ S   ++   S + + A  L     GK+ H 
Sbjct: 105 SYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHC 164

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI--------------- 165
            I   G   +   +GS LV M+     + + +R F+++D+  V +               
Sbjct: 165 QILRLGFGAN-AFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVE 223

Query: 166 ----------------WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CL 208
                           W  ++  +++ G   E+L +F++M+  GIA D YTF  +L  C 
Sbjct: 224 EARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACG 283

Query: 209 AV-----------------------VGNS--------RRVKDAHKLFDELSDRDVVSWNC 237
           A+                       VG++        R +K A  +F  ++ ++++SW  
Sbjct: 284 ALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTA 343

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I GY  NG +E+ + VF EM   G + D  T+ +V+S CAN  +L  G   H  AL + 
Sbjct: 344 LIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSG 403

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
               I+ +N L+ +Y KCG ++ A R+F++M     VSWT++++GYA+ G     I LF 
Sbjct: 404 LMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFE 463

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKD-VHDYIKENDMQSSLYVSNALMDMYAKC 416
            M+ +G++PD      +L AC+  G +E G+   H   K++ +         ++D+Y++ 
Sbjct: 464 KMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRS 523

Query: 417 GSMADAESVFNQMPV-KDIVSWNTMIGALDL 446
           G + +AE    QMP+  D + W T++ A  L
Sbjct: 524 GKLKEAEEFIKQMPMHPDAIGWGTLLSACRL 554



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 148/342 (43%), Gaps = 70/342 (20%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGR 152
           ID  T+ SIL  C  L +LE GK++H+ I  +    DD V +GS LV M+  C  +K   
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIRTRY--DDNVFVGSALVDMYSKCRSIKLAE 327

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------ 206
            VF ++    +  W  L+  Y + G  +E++ +F +MQ  GI  D YT   V+       
Sbjct: 328 TVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLA 387

Query: 207 ---------CLAVV-----------------GNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                    CLA+V                 G    ++DAH+LFDE+S  D VSW  ++S
Sbjct: 388 SLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVS 447

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA-VHAFALKACFS 299
           GY   G A++ +++F++ML  G   D  T + VLS C+  G +  GR+  H+        
Sbjct: 448 GYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIV 507

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                   ++D+YS+ G L  A    ++M                               
Sbjct: 508 PIDDHYTCMIDLYSRSGKLKEAEEFIKQM------------------------------- 536

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
               + PD     ++L AC   G +EIGK   + + E D Q+
Sbjct: 537 ---PMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQN 575



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 163/361 (45%), Gaps = 35/361 (9%)

Query: 43  HSSCTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC- 100
           +S C    ++ ++ + + CK   ++ A I  + + G  E+A+ V    ++  ID   Y  
Sbjct: 317 YSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTL 376

Query: 101 -SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
            S++  CA+L SLE+G + H +   SG+ +    + + LV ++  CG +++  R+F+++ 
Sbjct: 377 GSVISSCANLASLEEGAQFHCLALVSGL-MHYITVSNALVTLYGKCGSIEDAHRLFDEMS 435

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
                 W  L+  Y++ G  KE++ LF+KM + G+  D  TF  VL   +  G    V+ 
Sbjct: 436 FHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGF---VEK 492

Query: 220 AHKLFDELS-DRDVVS----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
               F  +  D  +V     + CMI  Y  +G  ++  E  K+M     + D     T+L
Sbjct: 493 GRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQM---PMHPDAIGWGTLL 549

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV- 333
           S C   G +  G+      L+       S+   L  M++  G  +   ++   M +R V 
Sbjct: 550 SACRLRGDMEIGKWAAENLLEIDPQNPASY-VLLCSMHAAKGQWNEVAQLRRGMRDRQVK 608

Query: 334 -------VSWTSMIAGYARE--------GVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
                  + + + +  ++ +        G+++    L   M+ EG +PDV   +S+LH  
Sbjct: 609 KEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDV---SSVLHDV 665

Query: 379 A 379
           A
Sbjct: 666 A 666


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 271/773 (35%), Positives = 432/773 (55%), Gaps = 44/773 (5%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L   A    L  G+ +H  +  S I+  D V+ + L+ M+  CG ++  RRVF+++   
Sbjct: 46  LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105

Query: 162 KVFI-WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-----SC------------ 203
           +  + W  +    ++ G  +ESL L  +M  LG+  +++T      +C            
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165

Query: 204 ----VLKC----------LAVVGNSRRVKD---AHKLFDELSDRDVVSWNCMISGYIANG 246
               VLK            A++    R  D   A ++FD L +R  V W  +I+ Y+  G
Sbjct: 166 VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAG 225

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
            A K +E+F  ML+ GF  D  +M +++S C   G++  G+ +H+ AL+     +   + 
Sbjct: 226 CASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSC 285

Query: 307 TLLDMYSKCG---DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI-RLFRGMVRE 362
            L+DMY+K      ++ A +VF+ M   +V+SWT++I+GY + GV +  +  LFR M+ E
Sbjct: 286 GLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNE 345

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
            I P+    +++L ACA     + G+ +H ++ +  +     V NAL+ MYA+ G M +A
Sbjct: 346 SIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEA 405

Query: 423 ESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE--PDGV---TMACILPACASLAALERG 477
              F+Q+   +I+S +  +       +     E   DGV   T A +L A AS+  L +G
Sbjct: 406 RKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKG 465

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           +++H   ++ G  +D+ ++N++V MY +CG L  A   FD +   ++ISWT +I+G   H
Sbjct: 466 QKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKH 525

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G+   A++ F+DM  AG++P++V++I+VL ACSH GLV EG   F  M+ +  + P++EH
Sbjct: 526 GYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEH 585

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           YAC+VDLL+R+G + EA +FI  MP   DA +W +LL  CR +   ++ E  A HV  LE
Sbjct: 586 YACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLE 645

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           P +   YVLL+N+YA+A  W+EV ++R  +  + L K  G SW+++   ++ F AG +SH
Sbjct: 646 PRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSH 705

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
           P A  I + L  L  E+K  GY P T   L +  E  KE  L  HSEK+A+AFG++   A
Sbjct: 706 PLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSA 765

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            + +R+ KNLRVC DCH   K++SK+  REI+LRDSNRFH  KDG CSC  +W
Sbjct: 766 TKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 206/409 (50%), Gaps = 37/409 (9%)

Query: 70  IGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I R+ + G   K +E+      +  + D  +  S++  C +L S+  G+++HS+    G+
Sbjct: 218 ITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGL 277

Query: 128 VIDDGVLGSKLVFMFVTCG---DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES-L 183
           V  D  +   LV M+        ++  R+VF  +    V  W  L+  Y ++G  + + +
Sbjct: 278 V-SDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVM 336

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVG--NSRRVKDAHKLFDELSDRDVVSWNCMISG 241
            LF++M +  I  +  T+S +LK  A +   +S R   AH L   ++  +VV  N ++S 
Sbjct: 337 ALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVG-NALVSM 395

Query: 242 YIANGVAEKGLEVFKEM-----LNLGFNVDLA--------------------TMVTVLSG 276
           Y  +G  E+  + F ++     L++  +V+                      T  ++LS 
Sbjct: 396 YAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSA 455

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
            A+ G L  G+ +HA ++KA F  +   +N+L+ MY++CG L+ A R F++M + +V+SW
Sbjct: 456 AASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISW 515

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD-VHDYIK 395
           TS+I+G A+ G    A+ +F  M+  G++P+     ++L AC+  GL++ GK+      K
Sbjct: 516 TSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQK 575

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           ++ +   +     ++D+ A+ G + +A    N+MP K D + W T++ A
Sbjct: 576 DHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSA 624



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 117/255 (45%), Gaps = 36/255 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++ A I  + + G  E  +  L+    +E  + +  TY ++L+ CA+L   + G+++H+ 
Sbjct: 317 SWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAH 376

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI----------------------- 158
           + ++ I     V+G+ LV M+   G ++E R+ F+++                       
Sbjct: 377 VLKTSIA-HVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSS 435

Query: 159 -----DNG-KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
                D+G   F +  L+   +  G   +   L       G  +D    + ++   A  G
Sbjct: 436 KIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCG 495

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
               ++DA + FDE+ D +V+SW  +ISG   +G A++ L +F +M+  G   +  T + 
Sbjct: 496 ---YLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIA 552

Query: 273 VLSGCANCGALMFGR 287
           VLS C++ G +  G+
Sbjct: 553 VLSACSHVGLVKEGK 567


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 279/794 (35%), Positives = 416/794 (52%), Gaps = 68/794 (8%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S  D+     +++ C    S+  GK +HS I  S  +  DG L S LV+M++ CG L+  
Sbjct: 25  SSFDSAAAVRLVREC---NSIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESA 81

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------ 205
             VF+KI +  + +W +L+  Y   G+   ++ LF ++   GIA D+  F  VL      
Sbjct: 82  IDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSE 141

Query: 206 ----------KC----------------LAVVGNSRRVKDAHKLFDELSDR-DVVSWNCM 238
                     +C                +++ G    ++DA+ LF  L    DVV WN M
Sbjct: 142 EFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAM 201

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I+    NG   + LE+F  ML LG   DL T V+V   C++  +L   RA       AC 
Sbjct: 202 ITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSL---RASQVKGFHACL 258

Query: 299 SK-----EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
            +     ++     L++ Y++CG++D A + F +M ER+ VSWTSMIA + + G    A+
Sbjct: 259 DETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLL-AV 317

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
             F  M+ EG+ P    + + L  C     L + + V    +E  + + + +   L+  Y
Sbjct: 318 ETFHAMLLEGVVPTRSTLFAALEGCE---DLRVARLVEAIAQEIGVVTDVAIVTDLVMAY 374

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFV----------------AMLQNFEPD 457
           A+C    DA  VF+    ++   W+  +    + V                A+ +   PD
Sbjct: 375 ARCDGQEDAIRVFS---AREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPD 431

Query: 458 GVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLF 516
            +     L ACASLAAL  GR+IH  +     +  D  + NAIV MY +CG L  AR  F
Sbjct: 432 RILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAF 491

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           D +PA+D ISW  M++    HG   D    F  M Q G + + ++F+++L AC+H+GLV 
Sbjct: 492 DGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVK 551

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            G   F+ M  +  + P  EHY CMVDLL R G L++A+  ++ MPV PDA  W +L+  
Sbjct: 552 AGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGA 611

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
           CRI+ + +     AE V EL  D+T  YV L N+Y+ A +W++   +R+ ++  GL+K P
Sbjct: 612 CRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIP 671

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
           G S IEI+ KV+ FV    SHP ++ I + L+R+   ++R GY   T   L + +E +KE
Sbjct: 672 GVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKE 731

Query: 757 VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
             L  HSEKLA+AFG+++ P G T+RV KNLRVC DCH  +KF+SK   REIV+RD  RF
Sbjct: 732 QLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRF 791

Query: 817 HHFKDGRCSCRGFW 830
           HHFKDG CSC  +W
Sbjct: 792 HHFKDGACSCGDYW 805


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/778 (34%), Positives = 423/778 (54%), Gaps = 51/778 (6%)

Query: 95   DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
            D  TY  +++ CA +  +  G  VH ++ ++G+V +D  +G+ LV  + T G + +  ++
Sbjct: 541  DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLV-EDVFVGNALVSFYGTHGFVTDALQL 599

Query: 155  FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYTFSCVLKCLAVVGN 213
            F+ +    +  WN ++  +S  G  +ES  L  +M +  G  A     + ++  L V   
Sbjct: 600  FDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 659

Query: 214  SRRV-----------------------------------KDAHKLFDELSDRDVVSWNCM 238
             R +                                    +A  +F   ++++VVSWN M
Sbjct: 660  EREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 719

Query: 239  ISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            + G+ A G      +V ++ML  G +V  D  T++  +  C +   L   + +H ++LK 
Sbjct: 720  VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 779

Query: 297  CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
             F       N  +  Y+KCG L  A RVF  +  ++V SW ++I G+A+      ++   
Sbjct: 780  EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 839

Query: 357  RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
              M   G+ PD + + S+L AC+    L +GK+VH +I  N ++  L+V  +++ +Y  C
Sbjct: 840  LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 899

Query: 417  GSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACIL 465
            G +   +++F+ M  K +VSWNT+I           AL +F  M L   +  G++M  + 
Sbjct: 900  GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 959

Query: 466  PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
             AC+ L +L  GRE H Y L+H +  D  +A +++DMY K G +  +  +F+ +  K   
Sbjct: 960  GACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 1019

Query: 526  SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
            SW  MI GYG+HG   +AI  F +M++ G  PD+++F+ VL AC+HSGL+ EG R+ + M
Sbjct: 1020 SWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQM 1079

Query: 586  RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI-EMMPVAPDATIWGSLLCGCRIHHEVK 644
            +    ++P L+HYAC++D+L R G L +A R + E M    D  IW SLL  CRIH  ++
Sbjct: 1080 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 1139

Query: 645  LAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIK 704
            + EKVA  +FELEP+    YVLL+N+YA   KWE+V+K+R++++   L+K+ GCSWIE+ 
Sbjct: 1140 MGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 1199

Query: 705  GKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSE 764
             KV  FV G       ++I+SL   L +++ + GY P T     +  E EK   L GHSE
Sbjct: 1200 RKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSE 1259

Query: 765  KLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
            KLA+ +G++    G TIRV KNLR+C DCH  AK +SK   REIV+RD+ RFHHFK+G
Sbjct: 1260 KLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 200/692 (28%), Positives = 342/692 (49%), Gaps = 74/692 (10%)

Query: 70   IGRFCEVGNLEKAMEVLY--------SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            I  FCE G+L+K+   +         SS+   +  +    +LQ     K +E G+K+H +
Sbjct: 405  ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 464

Query: 122  ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            +  S  + +D VL ++++ M+  CG   + R VF+ + +  +F WN ++  YS+   + E
Sbjct: 465  VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 524

Query: 182  SLYLFKKM-QSLGIAADSYTFSCVLKC----------LAV--------------VGNSRR 216
             L  F +M  +  +  D +T+ CV+K           LAV              VGN+  
Sbjct: 525  VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALV 584

Query: 217  --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML----NLGFN 264
                    V DA +LFD + +R++VSWN MI  +  NG +E+   +  EM+    +  F 
Sbjct: 585  SFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 644

Query: 265  VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
             D+AT+VTVL  CA    +  G+ VH +A+K    KE+  NN L+DMYSKCG +  A  +
Sbjct: 645  PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 704

Query: 325  FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR--EGIEPDVYAITSILHACACDG 382
            F+    ++VVSW +M+ G++ EG   G   + R M+   E ++ D   I + +  C  + 
Sbjct: 705  FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 764

Query: 383  LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
             L   K++H Y  + +   +  V+NA +  YAKCGS++ A+ VF+ +  K + SWN +IG
Sbjct: 765  FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 824

Query: 443  ----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                      +LD  + M +    PD  T+  +L AC+ L +L  G+E+HG+I+R+ +  
Sbjct: 825  GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 884

Query: 492  DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
            D  V  +++ +Y+ CG L   ++LFD +  K L+SW  +I GY  +GF   A+  F  M 
Sbjct: 885  DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 944

Query: 552  QAGIEPDEVSFISVLYACS-----HSGLVDEGWRFFNMMRYECNIEPKLEHYAC-MVDLL 605
              GI+   +S + V  ACS       G     +   +++  +  I       AC ++D+ 
Sbjct: 945  LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI-------ACSLIDMY 997

Query: 606  SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDNTGY 663
            ++ G+++++ +    +     A+ W +++ G  IH   K A K+ E +      PD+  +
Sbjct: 998  AKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF 1056

Query: 664  YVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
              +L          E ++ L +  S  GLK N
Sbjct: 1057 LGVLTACNHSGLIHEGLRYLDQMKSSFGLKPN 1088



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 40/418 (9%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVLYS----SEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
            ++N  +G F   G+     +VL       E  K D  T  + + +C     L   K++H 
Sbjct: 715  SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 774

Query: 121  IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
               +   V ++ ++ +  V  +  CG L   +RVF+ I +  V  WN L+  ++++ + +
Sbjct: 775  YSLKQEFVYNE-LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 833

Query: 181  ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------- 221
             SL    +M+  G+  DS+T   +L   + + + R  K+ H                   
Sbjct: 834  LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 893

Query: 222  -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                          LFD + D+ +VSWN +I+GY+ NG  ++ L VF++M+  G  +   
Sbjct: 894  SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 953

Query: 269  TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            +M+ V   C+   +L  GR  HA+ALK     +     +L+DMY+K G +  + +VF  +
Sbjct: 954  SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 1013

Query: 329  GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             E+S  SW +MI GY   G+   AI+LF  M R G  PD      +L AC   GL+  G 
Sbjct: 1014 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 1073

Query: 389  DVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK--DIVSWNTMIGA 443
               D +K +  ++ +L     ++DM  + G +  A  V  +   +  D+  W +++ +
Sbjct: 1074 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 1131



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 27/300 (9%)

Query: 46   CTINPI-SASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEV-----LYSSEKSKIDTKTY 99
            CT+  +  A   K+LV    ++N  I  + + G  ++A+ V     LY  +   I   + 
Sbjct: 903  CTVQALFDAMEDKSLV----SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI---SM 955

Query: 100  CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
              +   C+ L SL  G++ H+   +  ++ DD  +   L+ M+   G + +  +VFN + 
Sbjct: 956  MPVFGACSLLPSLRLGREAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK 1014

Query: 160  NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
                  WN ++  Y   G  KE++ LF++MQ  G   D  TF   L  L    +S  + +
Sbjct: 1015 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF---LGVLTACNHSGLIHE 1071

Query: 220  AHKLFDELSDR-----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
              +  D++        ++  + C+I      G  +K L V  E   +    D+    ++L
Sbjct: 1072 GLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE--EMSEEADVGIWKSLL 1129

Query: 275  SGCANCGALMFGRAVHAFALKACFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSV 333
            S C     L  G  V A   +     E   N  LL ++Y+  G  +   +V ++M E S+
Sbjct: 1130 SSCRIHQNLEMGEKVAAKLFE--LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSL 1187


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/571 (41%), Positives = 346/571 (60%), Gaps = 17/571 (2%)

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C +  +L     VH   L     ++      L+ MYS  G +D A +VF+K  +R++  W
Sbjct: 87  CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD----GLLEIGKDVHD 392
            ++       G  +  + L+  M R G+E D +  T +L AC         L  GK++H 
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 206

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           ++      S +Y+   L+DMYA+ G +  A  VF  MPV+++VSW+ MI           
Sbjct: 207 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 266

Query: 443 ALDLFVAML---QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
           AL  F  M+   ++  P+ VTM  +L ACASLAALE+G+ IHGYILR G+ +   V +A+
Sbjct: 267 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 326

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           V MY +CG L + + +FD +  +D++SW  +I+ YG+HG+G  AI  F +M   G  P  
Sbjct: 327 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 386

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+F+SVL ACSH GLV+EG R F  M  +  I+P++EHYACMVDLL R   L EA + ++
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 446

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            M   P   +WGSLL  CRIH  V+LAE+ +  +F LEP N G YVLLA++YAEA+ W+E
Sbjct: 447 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 506

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           VK++++ +  RGL+K PG  W+E++ K+  FV+    +P  ++I + L +L  +MK +GY
Sbjct: 507 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGY 566

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P+T+  L   +  EKE  + GHSEKLA+AFG++N   G+ IR+TKNLR+C DCH   KF
Sbjct: 567 IPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKF 626

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +SK   +EI++RD NRFH FK+G CSC  +W
Sbjct: 627 ISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 227/471 (48%), Gaps = 48/471 (10%)

Query: 13  LFFSPPNQSYGKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGR 72
           +F S P Q     + +   + LP   S     SC++   + SIS     K  N N  I  
Sbjct: 1   MFLSHPPQVIQPTYHTV--NFLP--RSPLKPPSCSVALNNPSISSGAGAKISN-NQLIQS 55

Query: 73  FCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG 132
            C+ G L++A+ VL  S++S    +TY  ++  C    SL D  +VH  I ++G    D 
Sbjct: 56  LCKEGKLKQAIRVL--SQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNG-SDQDP 112

Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
            L +KL+ M+   G +   R+VF+K     +++WN L    +  G+ +E L L+ KM  +
Sbjct: 113 FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI 172

Query: 193 GIAADSYTFSCVLK-CLA---VVGNSRRVKDAHK-------------------------- 222
           G+ +D +T++ VLK C+A    V +  + K+ H                           
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232

Query: 223 ------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVL 274
                 +F  +  R+VVSW+ MI+ Y  NG A + L  F+EM+      + +  TMV+VL
Sbjct: 233 VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             CA+  AL  G+ +H + L+      +   + L+ MY +CG L+   RVF++M +R VV
Sbjct: 293 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV 352

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW S+I+ Y   G    AI++F  M+  G  P      S+L AC+ +GL+E GK + + +
Sbjct: 353 SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412

Query: 395 -KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            +++ ++  +     ++D+  +   + +A  +   M  +     W +++G+
Sbjct: 413 WRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 197/412 (47%), Gaps = 22/412 (5%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G LK+  RV ++  +     + LL+       +  ++L + + +   G   D +  + ++
Sbjct: 60  GKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLI 119

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
              + +G+   V  A K+FD+   R +  WN +       G  E+ L ++ +M  +G   
Sbjct: 120 GMYSDLGS---VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVES 176

Query: 266 DLATMVTVLSGCA----NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           D  T   VL  C         LM G+ +HA   +  +S  +    TL+DMY++ G +D A
Sbjct: 177 DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYA 236

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVYAITSILHACA 379
             VF  M  R+VVSW++MIA YA+ G    A+R FR M+RE  +  P+   + S+L ACA
Sbjct: 237 SYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACA 296

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               LE GK +H YI    + S L V +AL+ MY +CG +   + VF++M  +D+VSWN+
Sbjct: 297 SLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNS 356

Query: 440 MIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-H 487
           +I           A+ +F  ML N   P  VT   +L AC+    +E G+ +   + R H
Sbjct: 357 LISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDH 416

Query: 488 GISADRNVANAIVDMYVKCGVL-VLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           GI         +VD+  +   L   A+ + DM        W  ++    +HG
Sbjct: 417 GIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 154/343 (44%), Gaps = 23/343 (6%)

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
           G  + +S   +I    +EG    AIR+    + +   P       ++  C     L    
Sbjct: 42  GAGAKISNNQLIQSLCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDAL 97

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD--- 445
            VH +I +N      +++  L+ MY+  GS+  A  VF++   + I  WN +  AL    
Sbjct: 98  RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157

Query: 446 -------LFVAMLQ-NFEPDGVTMACILPACA----SLAALERGREIHGYILRHGISADR 493
                  L+  M +   E D  T   +L AC     ++  L +G+EIH ++ R G S+  
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            +   +VDMY + G +  A  +F  +P ++++SW+ MIA Y  +G   +A+ TF +M + 
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277

Query: 554 GIE--PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
             +  P+ V+ +SVL AC+    +++G +  +       ++  L   + +V +  R G L
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKL 336

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
               R  + M    D   W SL+    +H   K A ++ E + 
Sbjct: 337 EVGQRVFDRMH-DRDVVSWNSLISSYGVHGYGKKAIQIFEEML 378



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 43/312 (13%)

Query: 95  DTKTYCSILQLCA----DLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           D  TY  +L+ C      +  L  GK++H+ +   G      ++ + LV M+   G +  
Sbjct: 177 DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM-TTLVDMYARFGCVDY 235

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYTFSCVLKCL 208
              VF  +    V  W+ ++  Y+K G   E+L  F++M  ++   + +S T   VL+  
Sbjct: 236 ASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC 295

Query: 209 A--------------------------------VVGNSRRVKDAHKLFDELSDRDVVSWN 236
           A                                + G   +++   ++FD + DRDVVSWN
Sbjct: 296 ASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWN 355

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALK 295
            +IS Y  +G  +K +++F+EML  G +    T V+VL  C++ G +  G R        
Sbjct: 356 SLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRD 415

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAGYAREGVFDGAIR 354
                +I     ++D+  +   LD A ++ + M  E     W S++      G  + A R
Sbjct: 416 HGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAER 475

Query: 355 LFRGMVREGIEP 366
             R +    +EP
Sbjct: 476 ASRRLF--ALEP 485


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/689 (37%), Positives = 386/689 (56%), Gaps = 31/689 (4%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA-DSYTFSCVLKCLAVVGNSRRVKDAHK 222
           F + +++   ++ G   E          LG+AA D YT + +L   A +G    V DA +
Sbjct: 109 FTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLG---LVDDAER 165

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN-LGFNVDLATMVTVLSGCANCG 281
           +FD +  RDVV+WN M+ GY++NG+    L  F+EM   L    D   ++  L+ C    
Sbjct: 166 VFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLES 225

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
           ALM GR VHA+ ++     ++    ++LDMY KCGD+  A  VF  M  R+VV+W  MI 
Sbjct: 226 ALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIG 285

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           GYA     + A   F  M  EG + +V    ++L ACA       G+ VH YI       
Sbjct: 286 GYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLP 345

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML 451
            + +  AL++MY+K G +  +E VF QM  K +VSWN MI A          + LF+ +L
Sbjct: 346 HVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLL 405

Query: 452 -QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
            Q   PD  TM+ ++PA   L  L + R++H YI+R G   +  + NAI+ MY +CG ++
Sbjct: 406 NQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVL 465

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            +R +FD + AKD+ISW  MI GY +HG G  A+  F++M+  G+ P+E +F+SVL ACS
Sbjct: 466 SSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACS 525

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
            SGL DEGW  FN M+ +  + P++EHY CM DLL R G+L E  +FIE MP+ P   +W
Sbjct: 526 VSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVW 585

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEP-----DNTGYYVLLANVYAEAEKWEEVKKLRE 685
           GSLL   R  +++ +AE  AE +F+LE      DNTG YVL++++YA+A +W++V++++ 
Sbjct: 586 GSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVERIKS 645

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +  +GL++    S +E+ G    FV G ++HP +K I+ +   L       G   + R 
Sbjct: 646 LMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFL------SGKIGEMRD 699

Query: 746 ALINAD----EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            +  +D    +  +      HS +LA+ FG+++  A   I V KN+R+C DCH   K +S
Sbjct: 700 PMNQSDPTSLDSRRTTEPNKHSVRLAVVFGLISTEARTPILVKKNVRICNDCHHALKLIS 759

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K + R IV+ D+N +H F DG C C  +W
Sbjct: 760 KYSGRRIVVGDTNIYHQFSDGSCCCGDYW 788



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 203/429 (47%), Gaps = 44/429 (10%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T+  +L+ CA L +L++G+  HS     G+   D   G+ L+  +   G + +  
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM------QSLGIAADSYTFSCVLK 206
           RVF+ +    V  WN ++  Y   G    +L  F++M      Q  G+   +   +C L+
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLE 224

Query: 207 CLAVVGNSRR---------------------------VKDAHKLFDELSDRDVVSWNCMI 239
              + G                               +  A  +F  +  R VV+WNCMI
Sbjct: 225 SALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
            GY  N   E+  + F +M   G  V++ T + +L+ CA   + ++GR+VH +  +  F 
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFL 344

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
             +     LL+MYSK G +  + +VF +M  +++VSW +MIA Y  + ++  AI LF  +
Sbjct: 345 PHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDL 404

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           + + + PD + +++++ A    GLL   + +H YI       +  + NA+M MYA+CG +
Sbjct: 405 LNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDV 464

Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPAC 468
             +  +F++M  KD++SWNTMI           AL++F  M  N   P+  T   +L AC
Sbjct: 465 LSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTAC 524

Query: 469 ASLAALERG 477
           +     + G
Sbjct: 525 SVSGLTDEG 533



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 213/445 (47%), Gaps = 17/445 (3%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           R+ DA +       RD    N +I G    G+    L  +  ML  G   D  T   VL 
Sbjct: 57  RMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARPDRFTFPVVLK 116

Query: 276 GCANCGALMFGRAVHAFALK-ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            CA  GAL  GRA H+ A++    + ++   N+LL  Y++ G +D A RVF+ M  R VV
Sbjct: 117 CCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPARDVV 176

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVYAITSILHACACDGLLEIGKDVHD 392
           +W SM+ GY   G+   A+  FR M  E +E   D   I + L AC  +  L  G++VH 
Sbjct: 177 TWNSMVDGYVSNGLGTLALVCFREM-HEALEVQHDGVGIIAALAACCLESALMQGREVHA 235

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           Y+  + M+  + V  +++DMY KCG +A AE VF  MP + +V+WN MIG          
Sbjct: 236 YVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEE 295

Query: 443 ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           A D FV M  +  + + VT   +L ACA   +   GR +HGYI R        +  A+++
Sbjct: 296 AFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLE 355

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY K G +  +  +F  +  K L+SW  MIA Y       +AI  F D+    + PD  +
Sbjct: 356 MYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFT 415

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
             +V+ A    GL+ +  +  + +      E  L   A M  + +R G++  +    + M
Sbjct: 416 MSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIM-HMYARCGDVLSSREIFDKM 474

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLA 646
             A D   W +++ G  IH + + A
Sbjct: 475 -AAKDVISWNTMIMGYAIHGQGRSA 498



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 144/281 (51%), Gaps = 13/281 (4%)

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
             +L+  ++  G +D A       G R       +I G A  G+   A+  +  M+  G 
Sbjct: 45  TKSLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGA 104

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHD-YIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
            PD +    +L  CA  G L+ G+  H   I+     + +Y  N+L+  YA+ G + DAE
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE--PDGVTMACILPACASL 471
            VF+ MP +D+V+WN+M+           AL  F  M +  E   DGV +   L AC   
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLE 224

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           +AL +GRE+H Y++RHG+  D  V  +I+DMY KCG +  A  +F  +P++ +++W  MI
Sbjct: 225 SALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
            GY ++    +A   F  M+  G + + V+ I++L AC+ +
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQT 325



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 52/341 (15%)

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAME--VLYSSEKSKIDTKTYCSILQLCADLKSLE 113
           S+T+V     +N  IG +      E+A +  V   +E  +++  T  ++L  CA  +S  
Sbjct: 274 SRTVV----TWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSL 329

Query: 114 DGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
            G+ VH  I      +   VL + L+ M+   G +K   +VF ++    +  WN ++  Y
Sbjct: 330 YGRSVHGYITRRQF-LPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAY 388

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------ 221
                + E++ LF  + +  +  D +T S V+    ++G  R+ +  H            
Sbjct: 389 MYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENT 448

Query: 222 --------------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                               ++FD+++ +DV+SWN MI GY  +G     LE+F EM   
Sbjct: 449 LIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCN 508

Query: 262 GFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
           G   + +T V+VL+ C+  G    G    ++         +I     + D+  + GDL  
Sbjct: 509 GLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKE 568

Query: 321 AIRVFEKMG-ERSVVSWTSM-----------IAGYAREGVF 349
            ++  E M  + +   W S+           IA YA E +F
Sbjct: 569 VMQFIENMPIDPTFRVWGSLLTASRNRNDIDIAEYAAERIF 609


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/774 (33%), Positives = 414/774 (53%), Gaps = 46/774 (5%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S+L  C   K    G+ +H+ + +      +  +G+ L+ +++  G  K   RVF  +  
Sbjct: 149 SVLSACTKGKLFAQGRMIHAQVYKQAFC-SETFVGNALIALYLGFGSFKLAERVFCDMLF 207

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR---- 216
                +N L+  +++ G+ + +L +F +MQ  G+  D  T + +L   A VG+ ++    
Sbjct: 208 CDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267

Query: 217 ----------------------------VKDAHKLFDELSDR-DVVSWNCMISGYIANGV 247
                                       ++ AH +F+ L DR +VV WN M+  Y     
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN-LGDRTNVVLWNLMLVAYGQISD 326

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
             K  E+F +M   G + +  T   +L  C   G +  G  +H+ ++K  F  ++  +  
Sbjct: 327 LAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGV 386

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L+DMYSK   LD A ++ E + +R VVSWTSMIAGY +    + A+  F+ M   G+ PD
Sbjct: 387 LIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPD 446

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
              + S   ACA    +  G  +H  +  +   + + + N L+++YA+CG   +A S+F 
Sbjct: 447 NIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFR 506

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGV-TMACILPACASLAALER 476
           ++  KD ++WN +I           AL +F+ M Q      V T    + A A+LA +++
Sbjct: 507 EIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQ 566

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           G+++HG  ++ G +++  VANA++ +Y KCG +  A+ +F  +  ++ +SW  +I     
Sbjct: 567 GKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQ 626

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG G +A+  F+ M+Q G++P++V+FI VL ACSH GLV+EG  +F  M     + P  +
Sbjct: 627 HGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPD 686

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HYAC+VD+L R G L  A RF++ MP+  +A IW +LL  C++H  +++ E  A+H+ EL
Sbjct: 687 HYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLEL 746

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           EP ++  YVLL+N YA   KW    ++R+ +  RG++K PG SWIE+K  V+ F  G   
Sbjct: 747 EPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRL 806

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP + +I   L  L   + + GY  +        ++ +K+     HSEKLA+AFG++ LP
Sbjct: 807 HPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLP 866

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               +RV KNLRVC DCH   KF S+  RREIVLRD  RFHHF  G CSC  +W
Sbjct: 867 PCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 261/526 (49%), Gaps = 48/526 (9%)

Query: 59  LVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGK 116
           L C    +N  I    + G+ E A+++    + S +  D  T  S+L  CA +  L+ GK
Sbjct: 206 LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGK 265

Query: 117 KVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
           ++HS + ++G+  D    GS L+ ++V CGD++    +FN  D   V +WNL++  Y + 
Sbjct: 266 QLHSYLLKAGMSFDYITEGS-LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQI 324

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN----------------------- 213
            +  +S  +F +MQ+ GI  + +T+ C+L+     G                        
Sbjct: 325 SDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS 384

Query: 214 ---------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                     R +  A K+ + L  RDVVSW  MI+GY+ +   E+ L  FKEM + G  
Sbjct: 385 GVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVW 444

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D   + +  S CA   A+  G  +HA    + ++ +IS  NTL+++Y++CG  + A  +
Sbjct: 445 PDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSL 504

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F ++  +  ++W  +I+G+ +  +++ A+ +F  M + G + +V+   S + A A    +
Sbjct: 505 FREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADI 564

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
           + GK VH    +    S   V+NAL+ +Y KCGS+ DA+ +F++M +++ VSWNT+I   
Sbjct: 565 KQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSC 624

Query: 443 --------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISAD 492
                   ALDLF  M Q   +P+ VT   +L AC+ +  +E G      +   +G++  
Sbjct: 625 SQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPI 684

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
            +    +VD+  + G L  AR   D +P   + + W  +++   +H
Sbjct: 685 PDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH 730



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 263/554 (47%), Gaps = 47/554 (8%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D ++G+ L+ ++   G + + R+VF ++ +     W  ++  Y++ G  KE+  L+ +M 
Sbjct: 77  DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMH 136

Query: 191 SLGIAADSYTFSCVLKCL------------------------AVVGNSR--------RVK 218
              +    Y  S VL                             VGN+           K
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFK 196

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
            A ++F ++   D V++N +ISG+   G  E  L++F EM   G   D  T+ ++L+ CA
Sbjct: 197 LAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACA 256

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS-VVSWT 337
           + G L  G+ +H++ LKA  S +     +LLD+Y KCGD++ A  +F  +G+R+ VV W 
Sbjct: 257 SVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWN 315

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
            M+  Y +      +  +F  M   GI P+ +    IL  C C G +E+G+ +H    +N
Sbjct: 316 LMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKN 375

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNF 454
             +S +YVS  L+DMY+K   +  A  +   +  +D+VSW +MI      D     L  F
Sbjct: 376 GFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF 435

Query: 455 E--------PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
           +        PD + +A    ACA + A+ +G +IH  +   G +AD ++ N +V++Y +C
Sbjct: 436 KEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC 495

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G    A SLF  I  KD I+W  +I+G+G       A+  F  M QAG + +  +FIS +
Sbjct: 496 GRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAI 555

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            A ++   + +G +  +    +     + E    ++ L  + G++ +A      M +  +
Sbjct: 556 SALANLADIKQG-KQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNE 614

Query: 627 ATIWGSLLCGCRIH 640
            + W +++  C  H
Sbjct: 615 VS-WNTIITSCSQH 627



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 206/412 (50%), Gaps = 17/412 (4%)

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
           + DL   +    G  N   L+    +HA ++      +    N L+D+Y+K G +  A +
Sbjct: 42  SADLTCALQACRGRGNRWPLVL--EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQ 99

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF+++  R  VSW +M++GYA+ G+   A RL+  M    + P  Y ++S+L AC    L
Sbjct: 100 VFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKL 159

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
              G+ +H  + +    S  +V NAL+ +Y   GS   AE VF  M   D V++NT+I  
Sbjct: 160 FAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISG 219

Query: 443 ---------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    AL +F  M L    PD VT+A +L ACAS+  L++G+++H Y+L+ G+S D
Sbjct: 220 HAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFD 279

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
                +++D+YVKCG +  A  +F++    +++ W +M+  YG       +   F  M+ 
Sbjct: 280 YITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQA 339

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
            GI P++ ++  +L  C+ +G ++ G +  + +  +   E  +     ++D+ S+   L 
Sbjct: 340 TGIHPNKFTYPCILRTCTCTGQIELGEQIHS-LSIKNGFESDMYVSGVLIDMYSKYRCLD 398

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHH--EVKLAEKVAEHVFELEPDNTG 662
           +A + +EM+    D   W S++ G   H   E  LA         + PDN G
Sbjct: 399 KARKILEMLE-KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 280/794 (35%), Positives = 414/794 (52%), Gaps = 68/794 (8%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S  D+     +++ C    S+  GK +HS I  S  +  DG L S LV+M++ CG L+  
Sbjct: 25  SSFDSAAAVRLVREC---NSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESA 81

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------ 205
             VF+KI +  + +W +L+  Y   G+   ++ LF ++   GIA D+  F  VL      
Sbjct: 82  IDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSE 141

Query: 206 ----------KC----------------LAVVGNSRRVKDAHKLFDELSDR-DVVSWNCM 238
                     +C                +++ G    ++DA+ LF  L    DVV WN M
Sbjct: 142 EFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAM 201

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I+    NG   + LE+F  ML LG   DL T V+V   C++  +L   RA        C 
Sbjct: 202 ITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSL---RASQVKGFHTCL 258

Query: 299 SK-----EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
            +     ++     L++ Y++CG++D A   F  M ER+ VSWTSMIA +A+ G    A+
Sbjct: 259 DETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLL-AV 317

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
             F  M+ EG+ P    + + L  C     L   + V    +E  + + + +   L+  Y
Sbjct: 318 ETFHAMLLEGVVPTRSTLFAALEGCE---DLHTARLVEAIAQEIGVATDVAIVTDLVMAY 374

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFV----------------AMLQNFEPD 457
           A+C    DA  VF+    ++   W+  +    + V                A+ +   PD
Sbjct: 375 ARCDGQEDAIRVFS---AREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPD 431

Query: 458 GVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLF 516
            +     L ACASLAAL  GR+IH  +     +  D  + NAIV MY +CG L  AR  F
Sbjct: 432 RILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAF 491

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           D +PA+D ISW  M++    HG   D    F  M Q G + + V+F+++L AC+H+GLV+
Sbjct: 492 DGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVE 551

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            G   F+ M  +  + P  EHY CMVDLL R G L++A+  ++ MPV PDA  W +L+  
Sbjct: 552 AGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGA 611

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
           CRI+ + +     AE V EL  ++T  YV L N+Y+ A +WE+   +R+ ++  GL+K P
Sbjct: 612 CRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIP 671

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
           G S IEI+ KV+ FV    SHP ++ I + L+R+   ++R GY   T   L + +E +KE
Sbjct: 672 GVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKE 731

Query: 757 VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
             L  HSEKLA+AFG+++ P G T+RV KNLRVC DCH  +KF+SK   REIV+RD  RF
Sbjct: 732 QLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRF 791

Query: 817 HHFKDGRCSCRGFW 830
           HHFKDG CSC  +W
Sbjct: 792 HHFKDGACSCGDYW 805


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/774 (33%), Positives = 414/774 (53%), Gaps = 46/774 (5%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S+L  C   K    G+ +H+ + +      +  +G+ L+ +++  G  K   RVF  +  
Sbjct: 149 SVLSACTKGKLFAQGRMIHAQVYKQAFC-SETFVGNALIALYLGFGSFKLAERVFCDMLF 207

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR---- 216
                +N L+  +++ G+ + +L +F +MQ  G+  D  T + +L   A VG+ ++    
Sbjct: 208 CDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267

Query: 217 ----------------------------VKDAHKLFDELSDR-DVVSWNCMISGYIANGV 247
                                       ++ AH +F+ L DR +VV WN M+  Y     
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN-LGDRTNVVLWNLMLVAYGQISD 326

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
             K  E+F +M   G + +  T   +L  C   G +  G  +H+ ++K  F  ++  +  
Sbjct: 327 LAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGV 386

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L+DMYSK G LD A ++ E + +R VVSWTSMIAGY +    + A+  F+ M   G+ PD
Sbjct: 387 LIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPD 446

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
              + S   ACA    +  G  +H  +  +   + + + N L+++YA+CG   +A S+F 
Sbjct: 447 NIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFR 506

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGV-TMACILPACASLAALER 476
           ++  KD ++WN +I           AL +F+ M Q      V T    + A A+LA +++
Sbjct: 507 EIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQ 566

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           G+++HG  ++ G +++  VANA++ +Y KCG +  A+ +F  +  ++ +SW  +I     
Sbjct: 567 GKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQ 626

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG G +A+  F+ M+Q G++P++V+FI VL ACSH GLV+EG  +F  M     + P  +
Sbjct: 627 HGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPD 686

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HYAC+VD+L R G L  A RF++ MP+  +A IW +LL  C++H  +++ E  A+H+ EL
Sbjct: 687 HYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLEL 746

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           EP ++  YVLL+N YA   KW    ++R+ +  RG++K PG SWIE+K  V+ F  G   
Sbjct: 747 EPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRL 806

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP + +I   L  L   + + GY  +        ++ +K+     HSEKLA+AFG++ LP
Sbjct: 807 HPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLP 866

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               +RV KNLRVC DCH   K  S+  RREIVLRD  RFHHF  G CSC  +W
Sbjct: 867 PCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 263/526 (50%), Gaps = 48/526 (9%)

Query: 59  LVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGK 116
           L C    +N  I    + G+ E A+++    + S +  D  T  S+L  CA +  L+ GK
Sbjct: 206 LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGK 265

Query: 117 KVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
           ++HS + ++G+  D    GS L+ ++V CGD++    +FN  D   V +WNL++  Y + 
Sbjct: 266 QLHSYLLKAGMSFDYITEGS-LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQI 324

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG--------NSRRVKD--------- 219
            +  +S  +F +MQ+ GI  + +T+ C+L+     G        +S  +K+         
Sbjct: 325 SDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS 384

Query: 220 ---------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                          A K+ + L  RDVVSW  MI+GY+ +   E+ L  FKEM + G  
Sbjct: 385 GVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVW 444

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D   + +  S CA   A+  G  +HA    + ++ +IS  NTL+++Y++CG  + A  +
Sbjct: 445 PDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSL 504

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F ++  +  ++W  +I+G+ +  ++  A+ +F  M + G + +V+   S + A A    +
Sbjct: 505 FREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADI 564

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
           + GK VH    +    S   V+NAL+ +Y KCGS+ DA+ +F++M +++ VSWNT+I   
Sbjct: 565 KQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSC 624

Query: 443 --------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISAD 492
                   ALDLF  M Q   +P+ VT   +L AC+ +  +E G      +   +G++  
Sbjct: 625 SQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPI 684

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
            +    +VD+  + G L  AR   D +P   + + W  +++   +H
Sbjct: 685 PDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH 730



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 265/554 (47%), Gaps = 47/554 (8%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D ++G+ L+ ++   G + + R+VF ++ +     W  ++  Y+++G  KE+  L+ +M 
Sbjct: 77  DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMH 136

Query: 191 SLGIAADSYTFSCVLKCL------------------------AVVGNSR--------RVK 218
              +    Y  S VL                             VGN+           K
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFK 196

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
            A ++F ++   D V++N +ISG+   G  E  L++F EM   G   D  T+ ++L+ CA
Sbjct: 197 LAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACA 256

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS-VVSWT 337
           + G L  G+ +H++ LKA  S +     +LLD+Y KCGD++ A  +F  +G+R+ VV W 
Sbjct: 257 SVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWN 315

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
            M+  Y +      +  +F  M   GI P+ +    IL  C C G +E+G+ +H    +N
Sbjct: 316 LMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKN 375

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNF 454
             +S +YVS  L+DMY+K G +  A  +   +  +D+VSW +MI      D     L  F
Sbjct: 376 GFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF 435

Query: 455 E--------PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
           +        PD + +A    ACA + A+ +G +IH  +   G +AD ++ N +V++Y +C
Sbjct: 436 KEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC 495

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G    A SLF  I  KD I+W  +I+G+G       A+  F  M QAG + +  +FIS +
Sbjct: 496 GRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAI 555

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            A ++   + +G +  +    +     + E    ++ L  + G++ +A      M +  +
Sbjct: 556 SALANLADIKQG-KQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNE 614

Query: 627 ATIWGSLLCGCRIH 640
            + W +++  C  H
Sbjct: 615 VS-WNTIITSCSQH 627



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 199/387 (51%), Gaps = 15/387 (3%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +HA ++      +    N L+D+Y+K G +  A +VF+++  R  VSW +M++GYA+ G+
Sbjct: 65  IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGL 124

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A RL+  M    + P  Y ++S+L AC    L   G+ +H  + +    S  +V NA
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA 184

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPD 457
           L+ +Y   GS   AE VF  M   D V++NT+I           AL +F  M L    PD
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPD 244

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
            VT+A +L ACAS+  L++G+++H Y+L+ G+S D     +++D+YVKCG +  A  +F+
Sbjct: 245 CVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN 304

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
           +    +++ W +M+  YG       +   F  M+  GI P++ ++  +L  C+ +G ++ 
Sbjct: 305 LGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIEL 364

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           G +  + +  +   E  +     ++D+ S+ G L +A + +EM+    D   W S++ G 
Sbjct: 365 GEQIHS-LSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE-KRDVVSWTSMIAGY 422

Query: 638 RIHH--EVKLAEKVAEHVFELEPDNTG 662
             H   E  LA         + PDN G
Sbjct: 423 VQHDFCEEALATFKEMQDCGVWPDNIG 449


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 275/825 (33%), Positives = 442/825 (53%), Gaps = 62/825 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY-----SSEKSKIDTKTYCSILQLCADLKSLEDGKKVH 119
           N       F     L KA+  L      S+  +K+ T +   +L+ C   K+   GK +H
Sbjct: 18  NSQQNFNHFNNPQQLHKAITTLNLTDTESTHNNKLITSSL--LLKQCIRTKNTHLGKLLH 75

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK----------------- 162
             +  S + +D  +L S L+ ++    D      +F  ++N K                 
Sbjct: 76  HKLTTSNLPLDTLLLNS-LITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNR 134

Query: 163 -----VFIWNLLM-------HEYS---------KTGNFKESLYLFKKMQSLGIAADSYTF 201
                V +++ L+       +EY          K G FK  L LF  +   G        
Sbjct: 135 NCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCV 194

Query: 202 SCVLKCLAVVGNS-RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML- 259
            C L  + V G S   ++ A K+FD++ +++VV+W  MI+     G  ++ +++F EML 
Sbjct: 195 GCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLV 254

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
           + G+  D  T+  ++S CA    L  G+ +H++ +++    ++    +L+DMY+KCG + 
Sbjct: 255 SSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQ 314

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREG--VFDGAIRLFRGMVREG-IEPDVYAITSILH 376
            A +VF+ M E +V+SWT+++ GY R G      A+R+F  M+ +G + P+ +  + +L 
Sbjct: 315 EARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLK 374

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
           ACA     + G+ VH    +  + +   V N L+ +YAK G M  A   F+ +  K++VS
Sbjct: 375 ACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVS 434

Query: 437 WNTM--IGALDLFVAMLQNFEPD------GV---TMACILPACASLAALERGREIHGYIL 485
              +      D  +   Q+ + +      GV   T A +L   A +  + +G +IH  ++
Sbjct: 435 ETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVV 494

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
           + G   D +V NA++ MY KCG    A  +F+ +   ++I+WT +I G+  HGF   A+ 
Sbjct: 495 KIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALE 554

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLL 605
            F +M + G++P++V++I+VL ACSH GL+DE W+ F  MR    I P++EHYACMVDLL
Sbjct: 555 LFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLL 614

Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV 665
            R+G LSEA  FI  MP   DA +W + L  CR+H   KL E  A+ + E EP +   Y+
Sbjct: 615 GRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYI 674

Query: 666 LLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIES 725
           LL+N+YA   +WE+V  +R+ + ++ + K  G SWIE++ +V+ F  G + HP A++I  
Sbjct: 675 LLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYE 734

Query: 726 LLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTK 785
            L  L L++K  GY P T + L + ++ +KE  L  HSEKLA+AF +++ P  + IRV K
Sbjct: 735 KLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFK 794

Query: 786 NLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           NLRVCGDCH   K++S  + REIV+RD+NRFHH KDG CSC  +W
Sbjct: 795 NLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 130/549 (23%), Positives = 245/549 (44%), Gaps = 61/549 (11%)

Query: 49  NPISA-SISKTLVCKTKN---YNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCS 101
           +PI+A SI +++    ++   Y++ I  F    N  KA+E+   L   +    +   + +
Sbjct: 102 DPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTA 161

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFV---TCGDLKEGRRVFNKI 158
           +++ C      + G  +   + ++G       +G +L+ MFV   +  DL+  R+VF+K+
Sbjct: 162 VIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKM 221

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSCVLKCLAVV------ 211
               V  W L++   ++ G   E++ LF +M  S G   D +T + ++   A +      
Sbjct: 222 REKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLG 281

Query: 212 --------------------------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYI-- 243
                                          V++A K+FD + + +V+SW  +++GY+  
Sbjct: 282 KELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRG 341

Query: 244 ANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             G   + + +F  M L  G   +  T   VL  CA+     FG  VH   +K   S   
Sbjct: 342 GGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAID 401

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              N L+ +Y+K G ++ A + F+ + E+++VS T +     ++   +    L R +   
Sbjct: 402 CVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYV 461

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G     +   S+L   AC G +  G+ +H  + +   ++ L V+NAL+ MY+KCG+   A
Sbjct: 462 GSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAA 521

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASL 471
             VFN M   ++++W ++I           AL+LF  ML+   +P+ VT   +L AC+ +
Sbjct: 522 LQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHV 581

Query: 472 AALERGREIHGYILR--HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWT 528
             ++   + H   +R  HGI         +VD+  + G+L  A    + +P   D + W 
Sbjct: 582 GLIDEAWK-HFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWR 640

Query: 529 IMIAGYGMH 537
             +    +H
Sbjct: 641 TFLGSCRVH 649


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 271/822 (32%), Positives = 416/822 (50%), Gaps = 136/822 (16%)

Query: 99  YCSILQLCADLK--SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           Y + L+LC  L+  SL+  + VH  I   G      +L ++L+ ++    +L   R++F+
Sbjct: 15  YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHIL-NRLIDVYCKSSELDYARQLFD 73

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           +I          ++  Y  +G+                                      
Sbjct: 74  EISEPDKIARTTMVSGYCASGD-------------------------------------- 95

Query: 217 VKDAHKLFDE--LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           +  A  +F+E  +S RD V +N MI+G+  N      + +F +M + GF  D  T  +VL
Sbjct: 96  IALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVL 155

Query: 275 SGCA-------NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD----LDGAIR 323
           +G A        C         HA ALK+      S +N L+ +YS+C      L  A +
Sbjct: 156 AGLALVVDDEKQCVQF------HAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARK 209

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFD--------------------------------G 351
           VF+ + E+   SWT+M+ GY + G FD                                 
Sbjct: 210 VFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQE 269

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           A+ + R MV  GIE D +   S++ ACA   LL++GK VH Y+   +   S +  N+L+ 
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVT 328

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMIGA---------------------------- 443
           +Y KCG   +A ++F +MP KD+VSWN ++                              
Sbjct: 329 LYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388

Query: 444 -------------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
                        L LF  M  + FEP     +  + +CA L A   G++ H  +++ G 
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGF 448

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
            +  +  NA++ MY KCGV+  A+ +F  +P  D +SW  +IA  G HG G +A+  + +
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEE 508

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M + GI PD ++F++VL ACSH+GLVD+G ++FN M     I P  +HYA ++DLL R+G
Sbjct: 509 MLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSG 568

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
             SEA   IE +P  P A IW +LL GCR+H  ++L    A+ +F L P++ G Y+LL+N
Sbjct: 569 KFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSN 628

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           +YA   +WEEV ++R+ +  RG+KK   CSWIE++ +V+ F+   +SHP A+ +   L+ 
Sbjct: 629 MYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQD 688

Query: 730 LRLEMKREGYFPKTRYALINAD-EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLR 788
           L  EM+R GY P T + L + + +  KE  L  HSEK+A+AFG++ LP G TIR+ KNLR
Sbjct: 689 LGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLR 748

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            CGDCH   +F+SK  +R+I+LRD  RFHHF++G CSC  FW
Sbjct: 749 TCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/770 (33%), Positives = 424/770 (55%), Gaps = 62/770 (8%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI-WNLLMHEY 173
           G+ +H  +  + ++  D ++ + L+ M+  CG ++  RRVF+ +   +  + W  +    
Sbjct: 62  GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKCL------------------------ 208
           ++ G  +E+L L  +M   G+  +++T  +    C                         
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGT 181

Query: 209 ------AVVGNSRRVKD---AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
                 A++    R  D   A K+F+ L +R VV W  MI+ Y+  G A K +E+F  ML
Sbjct: 182 DVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGML 241

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG--- 316
             GF  D  TM +++S CA  G+   G+ +H+  L+     +   +  L+DMY+K     
Sbjct: 242 EDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ 301

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
            ++ A +VF++M   +V+SWT++I+GY +  G  + A+ L   M+ E IEP+    +S+L
Sbjct: 302 SMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLL 361

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            ACA     + G+ +H  + +  + +   V NAL+ MYA+ G M +A   F+Q+  ++++
Sbjct: 362 KACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLL 421

Query: 436 S--------------WNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIH 481
           S              W++ I ++D+ V+          T A +L A A++    +G+++H
Sbjct: 422 STSSDIGETGRSNASWSSQIESMDVGVSTF--------TFASLLSAAATVGLPTKGQQLH 473

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD-MIPAKDLISWTIMIAGYGMHGFG 540
              ++ G  +D+ ++N++V MY +CG L  A   FD M    ++ISWT +I+    HG  
Sbjct: 474 ALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHA 533

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
             A++ F+DM  +G++P++V++I+VL ACSH GLV EG  +F  M+ +  + P++EHYAC
Sbjct: 534 ERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYAC 593

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           MVDLL+R+G + EA  FI  MP   DA +W +LL  CR +  +++ E  A HV +LEP +
Sbjct: 594 MVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQD 653

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
              YVLL+N+YA    W+EV ++R  +  R L K  G SW+ +   ++ F AG +SHP A
Sbjct: 654 PAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRA 713

Query: 721 KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
           ++I + L  L  E+K  GY P T   L +  +  KE  L  HSEK+A+AFG++     + 
Sbjct: 714 QEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKP 773

Query: 781 IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           IR+ KNLRVC DCH   K++SK+  REI+LRDSNRFH  KDG+CSC  +W
Sbjct: 774 IRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/313 (33%), Positives = 165/313 (52%), Gaps = 19/313 (6%)

Query: 285 FGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAG 342
            GRA+H   L       +    N+LL MYSKCG +  A RVF+ M G R +VSWT+M   
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE-IGKDVHDY-IKENDMQ 400
             R G    A+ L   M+  G+ P+ + + +  HAC    L    G  V  + IK     
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM 450
           + + V  AL+DM+A+ G +  A  VFN +  + +V W  MI           A++LF+ M
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM 240

Query: 451 LQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV- 508
           L++ FEPDG TM+ ++ ACA   +   G+++H  +LR G+ +D  V+  +VDMY K  + 
Sbjct: 241 LEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQME 300

Query: 509 --LVLARSLFDMIPAKDLISWTIMIAGYGM-HGFGCDAIATFNDMRQAGIEPDEVSFISV 565
             +  AR +F  +P  +++SWT +I+GY    G   +A+    +M    IEP+ +++ S+
Sbjct: 301 QSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSL 360

Query: 566 LYACSHSGLVDEG 578
           L AC++    D G
Sbjct: 361 LKACANLSDQDSG 373



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 198/410 (48%), Gaps = 37/410 (9%)

Query: 70  IGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I R+ + G   KA+E+      +  + D  T  S++  CA+  S   G+++HS++   G+
Sbjct: 221 ITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGL 280

Query: 128 VIDDGVLGSKLVFMFVTC---GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK-ESL 183
           V  D  +   LV M+        ++  R+VF ++    V  W  L+  Y + G  +  ++
Sbjct: 281 V-SDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAV 339

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDV-VSWNCMISGY 242
            L  +M +  I  +  T+S +LK  A + +    +  H    + S  +V V  N ++S Y
Sbjct: 340 ELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMY 399

Query: 243 IANGVAEKGLEVFKEML--------------------------NLGFNVDLATMVTVLSG 276
             +G  E+  + F ++                           ++   V   T  ++LS 
Sbjct: 400 AESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESMDVGVSTFTFASLLSA 459

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVS 335
            A  G    G+ +HA ++K  F  +   +N+L+ MYS+CG LD A R F++M  + +V+S
Sbjct: 460 AATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVIS 519

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI- 394
           WTS+I+  A+ G  + A+ LF  M+  G++P+     ++L AC+  GL++ GK+    + 
Sbjct: 520 WTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQ 579

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           K++ +   +     ++D+ A+ G + +A    N+MP K D + W T++GA
Sbjct: 580 KDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGA 629



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 86/411 (20%), Positives = 178/411 (43%), Gaps = 52/411 (12%)

Query: 65  NYNAEIGRFCEVGNLEK-AMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSI 121
           ++ A I  + + G  E  A+E+L       I+    TY S+L+ CA+L   + G+++H+ 
Sbjct: 320 SWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHAR 379

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           + ++ I  +  V+G+ LV M+   G ++E R+ F+++     +  NLL          + 
Sbjct: 380 VMKTSIG-NVNVVGNALVSMYAESGCMEEARKAFDQL-----YERNLLSTSSDIGETGRS 433

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL------------------ 223
           +     +++S+ +   ++TF+ +L   A VG   + +  H L                  
Sbjct: 434 NASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVS 493

Query: 224 --------------FDELS-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                         FDE+  D +V+SW  +IS    +G AE+ L +F +M+  G   +  
Sbjct: 494 MYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDV 553

Query: 269 TMVTVLSGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T + VLS C++ G +  G+    +          +     ++D+ ++ G +  A+    +
Sbjct: 554 TYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINE 613

Query: 328 MG-ERSVVSWTSMI-AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           M  +   + W +++ A    E +  G I     +  E  +P  Y + S L+A    GL +
Sbjct: 614 MPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHG--GLWD 671

Query: 386 IGKDVHDYIKENDMQ-----SSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
               +   ++  ++      S ++V N + +  A   S   A+ ++ ++ V
Sbjct: 672 EVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAV 722


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 290/815 (35%), Positives = 421/815 (51%), Gaps = 84/815 (10%)

Query: 96  TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG---DLKEGR 152
           TK   S L+ C   K++++ K  H  + + G+  D   + +KLV      G    L   +
Sbjct: 32  TKATPSSLKNC---KTIDELKMFHRSLTKQGLDNDVSTI-TKLVARSCELGTRESLSFAK 87

Query: 153 RVF-NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-- 209
            VF N    G  F++N L+  Y+ +G   E++ LF +M + GI+ D YTF   L   A  
Sbjct: 88  EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147

Query: 210 -VVGNSRRV----------KD-------------------AHKLFDELSDRDVVSWNCMI 239
              GN  ++          KD                   A K+FDE+S+R+VVSW  MI
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207

Query: 240 SGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
            GY     A+  +++F  M+ +     +  TMV V+S CA    L  G  V+AF   +  
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
                  + L+DMY KC  +D A R+F++ G  ++    +M + Y R+G+   A+ +F  
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC-- 416
           M+  G+ PD  ++ S + +C+    +  GK  H Y+  N  +S   + NAL+DMY KC  
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 387

Query: 417 -----------------------------GSMADAESVFNQMPVKDIVSWNTMIG----- 442
                                        G +  A   F  MP K+IVSWNT+I      
Sbjct: 388 QDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQG 447

Query: 443 -----ALDLFVAML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                A+++F +M   +    DGVTM  I  AC  L AL+  + I+ YI ++GI  D  +
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
              +VDM+ +CG    A S+F+ +  +D+ +WT  I    M G    AI  F+DM + G+
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           +PD V+F+  L ACSH GLV +G   F  M     + P+  HY CMVDLL R G L EA 
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
           + IE MP+ P+  IW SLL  CR+   V++A   AE +  L P+ TG YVLL+NVYA A 
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687

Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
           +W ++ K+R  +  +GL+K PG S I+I+GK + F +G  SHP    IE++L  +     
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRAS 747

Query: 736 REGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHE 795
             G+ P     L++ DE EK   L  HSEKLAMA+G+++   G TIR+ KNLRVC DCH 
Sbjct: 748 HLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHS 807

Query: 796 MAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            AKF SK   REI+LRD+NRFH+ + G+CSC  FW
Sbjct: 808 FAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 254/554 (45%), Gaps = 83/554 (14%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           YN+ I  +   G   +A+ +      S I  D  T+   L  CA  ++  +G ++H +I 
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G   D  V  S LV  +  CG+L   R+VF+++    V  W  ++  Y++    K+++
Sbjct: 162 KMGYAKDLFVQNS-LVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220

Query: 184 YLFKKM-QSLGIAADSYTFSCVL-------------KCLAVVGNS--------------- 214
            LF +M +   +  +S T  CV+             K  A + NS               
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 +  A +LFDE    ++   N M S Y+  G+  + L VF  M++ G   D  +M
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           ++ +S C+    +++G++ H + L+  F    +  N L+DMY KC   D A R+F++M  
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGM------------------------------- 359
           ++VV+W S++AGY   G  D A   F  M                               
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460

Query: 360 -VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
             +EG+  D   + SI  AC   G L++ K ++ YI++N +Q  + +   L+DM+++CG 
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPA 467
              A S+FN +  +D+ +W   IG          A++LF  M+ Q  +PDGV     L A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580

Query: 468 CASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP--AKDL 524
           C+    +++G+EI   +L+ HG+S +      +VD+  + G+L  A  L + +P    D+
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640

Query: 525 ISWTIMIAGYGMHG 538
           I W  ++A   + G
Sbjct: 641 I-WNSLLAACRVQG 653



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 14/203 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  I    +    E+A+EV   + S E    D  T  SI   C  L +L+  K ++  
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I ++GI +D   LG+ LV MF  CGD +    +FN + N  V  W   +   +  GN + 
Sbjct: 496 IEKNGIQLDVR-LGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL------SDRDVVSW 235
           ++ LF  M   G+  D   F   +  L    +   V+   ++F  +      S  D V +
Sbjct: 555 AIELFDDMIEQGLKPDGVAF---VGALTACSHGGLVQQGKEIFYSMLKLHGVSPED-VHY 610

Query: 236 NCMISGYIANGVAEKGLEVFKEM 258
            CM+      G+ E+ +++ ++M
Sbjct: 611 GCMVDLLGRAGLLEEAVQLIEDM 633


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/582 (41%), Positives = 358/582 (61%), Gaps = 16/582 (2%)

Query: 263 FNVDLAT-MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           FNV  A+  + +L  CA  GA+M  +A H   ++     +++ +N L++ YSKCG ++ A
Sbjct: 58  FNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELA 117

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA-- 379
            +VF+ M ERS+VSW +MI  Y R  +   A+ +F  M  EG +   + I+S+L AC   
Sbjct: 118 RQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGAN 177

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
           CD L    K +H    +  +  +LYV  AL+D+YAKCG + DA  VF  M  K  V+W++
Sbjct: 178 CDALE--CKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSS 235

Query: 440 MIG----------ALDLFV-AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           M+           AL L+  A   + E +  T++ ++ AC++LAAL  G+++H  I + G
Sbjct: 236 MVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSG 295

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
             ++  VA++ VDMY KCG L  +  +F  +  K++  W  +I+G+  H    + +  F 
Sbjct: 296 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFE 355

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            M+Q G+ P+EV+F S+L  C H+GLV+EG RFF +MR    + P + HY+CMVD+L R 
Sbjct: 356 KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRA 415

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           G LSEAY  I+ +P  P A+IWGSLL  CR+   ++LAE  A+ +FELEP+N G +VLL+
Sbjct: 416 GLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLS 475

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           N+YA  ++WEE+ K R+ +    +KK  G SWI+IK KV+IF  G SSHP  ++I ++L 
Sbjct: 476 NIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLD 535

Query: 729 RLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLR 788
            L +E+++ GY P   + L + +  +KE  L  HSEKLA+ FG++ LP G T+R+ KNLR
Sbjct: 536 NLVIELRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLR 595

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +C DCHE  K  S   RR I++RD+NRFHHF DG CSC  FW
Sbjct: 596 ICVDCHEFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 186/331 (56%), Gaps = 15/331 (4%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V+ A ++FD + +R +VSWN MI  Y  N +  + L++F EM N GF     T+ +VLS 
Sbjct: 114 VELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSA 173

Query: 277 C-ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
           C ANC AL   + +H  ++K      +     LLD+Y+KCG ++ A++VFE M ++S V+
Sbjct: 174 CGANCDALE-CKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVT 232

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W+SM+AGY +   ++ A+ L+R   R  +E + + ++S++ AC+    L  GK +H  I+
Sbjct: 233 WSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIR 292

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LD 445
           ++   S+++V+++ +DMYAKCGS+ ++  +F+++  K+I  WNT+I            + 
Sbjct: 293 KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMI 352

Query: 446 LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVANAIVDMY 503
           LF  M Q+   P+ VT + +L  C     +E GR     +   +G+S +    + +VD+ 
Sbjct: 353 LFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 412

Query: 504 VKCGVLVLARSLFDMIPAKDLIS-WTIMIAG 533
            + G+L  A  L   IP +   S W  ++A 
Sbjct: 413 GRAGLLSEAYELIKSIPFEPTASIWGSLLAS 443



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/391 (22%), Positives = 189/391 (48%), Gaps = 35/391 (8%)

Query: 87  YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG 146
           YS E + +    +  ILQLCA   ++ + K  H       +   D  L + L+  +  CG
Sbjct: 54  YSDEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQ-GDVTLSNVLINAYSKCG 112

Query: 147 DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
            ++  R+VF+ +    +  WN ++  Y++     E+L +F +M++ G     +T S VL 
Sbjct: 113 FVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLS 172

Query: 207 ---------------CLAV---------VGNSR--------RVKDAHKLFDELSDRDVVS 234
                          CL++         VG +          + DA ++F+ + D+  V+
Sbjct: 173 ACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVT 232

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           W+ M++GY+ +   E+ L +++    +    +  T+ +V+  C+N  AL+ G+ +HA   
Sbjct: 233 WSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIR 292

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           K+ F   +   ++ +DMY+KCG L  +  +F ++ E+++  W ++I+G+A+       + 
Sbjct: 293 KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMI 352

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMY 413
           LF  M ++G+ P+    +S+L  C   GL+E G+     ++    +  ++   + ++D+ 
Sbjct: 353 LFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 412

Query: 414 AKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            + G +++A  +   +P +   S W +++ +
Sbjct: 413 GRAGLLSEAYELIKSIPFEPTASIWGSLLAS 443



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 117/226 (51%), Gaps = 14/226 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
            +++ +  + +  N E+A+ +   +++  ++    T  S++  C++L +L +GK++H++I
Sbjct: 232 TWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVI 291

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +SG    +  + S  V M+  CG L+E   +F+++    + +WN ++  ++K    KE 
Sbjct: 292 RKSGFG-SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEV 350

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSWNC 237
           + LF+KMQ  G+  +  TFS +   L+V G++  V++  + F  +        +VV ++C
Sbjct: 351 MILFEKMQQDGMHPNEVTFSSL---LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSC 407

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           M+      G+  +  E+ K   ++ F    +   ++L+ C  C  L
Sbjct: 408 MVDILGRAGLLSEAYELIK---SIPFEPTASIWGSLLASCRVCKNL 450



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/315 (19%), Positives = 145/315 (46%), Gaps = 39/315 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLC-ADLKSLEDGKKVHSI 121
           ++N  IG +       +A+++ +   +E  K    T  S+L  C A+  +LE  KK+H +
Sbjct: 131 SWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALE-CKKLHCL 189

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             ++ + ++  V G+ L+ ++  CG + +  +VF  + +     W+ ++  Y ++ N++E
Sbjct: 190 SMKTSLDLNLYV-GTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEE 248

Query: 182 SLYLFKKMQSLGIAADSYTFS---CVLKCLAVVGNSRR---------------------- 216
           +L L+++ Q + +  + +T S   C    LA +   ++                      
Sbjct: 249 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVD 308

Query: 217 -------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                  +++++ +F E+ ++++  WN +ISG+  +   ++ + +F++M   G + +  T
Sbjct: 309 MYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 368

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
             ++LS C + G +  GR            S  +   + ++D+  + G L  A  + + +
Sbjct: 369 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 428

Query: 329 G-ERSVVSWTSMIAG 342
             E +   W S++A 
Sbjct: 429 PFEPTASIWGSLLAS 443


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/655 (37%), Positives = 374/655 (57%), Gaps = 44/655 (6%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +F+ + + + + WN MI G+  +      L ++  M++LG   +  T   +L  CA 
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS- 338
                 G+ +H   LK  F  ++  + +L+ MY +   L+ A +VF++   R VVS+T+ 
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 339 ------------------------------MIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
                                         MI+GYA  G +  A+ LF  M++  + PD 
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               ++L ACA  G +E+G+ VH ++ ++   S+L + NAL+D+Y+KCG +  A  +F  
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALERG 477
           +  KD++SWNT+IG          AL LF  ML++ E P+ VTM  +LPACA L A++ G
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG 316

Query: 478 REIHGYILRH--GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
           R IH YI +   G++   ++  +++DMY KCG +  A  +F+ +  K L SW  MI G+ 
Sbjct: 317 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 376

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
           MHG    +   F+ MR+ GIEPD+++F+ +L ACSHSG++D G   F  M  +  + PKL
Sbjct: 377 MHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKL 436

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           EHY CM+DLL  +G   EA   I  M + PD  IW SLL  C++H  V+LAE  A+++ +
Sbjct: 437 EHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIK 496

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           +EP+N   Y+LL+N+YA A +WE+V ++R  ++ + +KK PGCS IE+   V  FV G  
Sbjct: 497 IEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDK 556

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
            HP  ++I  +L+ + + ++  G+ P T   L   +E  KE AL  HSEKLA+AFG+++ 
Sbjct: 557 FHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 616

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             G  + + KNLRVC +CHE  K +SK  +REIV RD  RFHHF+DG CSC  +W
Sbjct: 617 KPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 232/459 (50%), Gaps = 54/459 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T+  +L+ CA  K+  +G+++H  + + G  +D  V  S L+ M+V    L++  +V
Sbjct: 63  NSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTS-LISMYVQNWRLEDAYKV 121

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F++  +  V  +  L+  Y+  G+                                    
Sbjct: 122 FDRSSHRDVVSYTALITGYASRGD------------------------------------ 145

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             ++ A KLFDE+  +DVVSWN MISGY   G  ++ LE+F+EM+ +    D +T VTVL
Sbjct: 146 --IRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVL 203

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S CA+ G++  GR VH++     F   +   N L+D+YSKCG+++ A  +F+ +  + V+
Sbjct: 204 SACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVI 263

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW ++I GY    ++  A+ LF+ M+R G  P+   + S+L ACA  G ++IG+ +H YI
Sbjct: 264 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYI 323

Query: 395 KE--NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------G 442
            +    + ++  +  +L+DMYAKCG +  A  VFN M  K + SWN MI           
Sbjct: 324 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADA 383

Query: 443 ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIV 500
           + DLF  M +   EPD +T   +L AC+    L+ GR I   + + + ++        ++
Sbjct: 384 SFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMI 443

Query: 501 DMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
           D+    G+   A  + + +  + D + W  ++    MHG
Sbjct: 444 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 482



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 34/187 (18%), Positives = 84/187 (44%), Gaps = 5/187 (2%)

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  A S+F+ I   + + W  MI G+ +      ++  +  M   G+ P+  +F  +L +
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           C+ S    EG +    +  +   +  L  +  ++ +  +   L +AY+  +      D  
Sbjct: 74  CAKSKTFTEGQQIHGQV-LKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFD-RSSHRDVV 131

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
            + +L+ G     +++ A+K+ +   E+   +   +  + + YAE   ++E  +L E++ 
Sbjct: 132 SYTALITGYASRGDIRSAQKLFD---EIPVKDVVSWNAMISGYAETGCYKEALELFEEMM 188

Query: 689 RRGLKKN 695
           +  ++ +
Sbjct: 189 KMNVRPD 195


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/741 (34%), Positives = 392/741 (52%), Gaps = 47/741 (6%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           + L+FMF  CGD+ E   +FN+++      WN ++   ++    +ES   F  M+ +   
Sbjct: 199 NSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEE 258

Query: 196 ADSYTFSCVLKC--------------------------------LAVVGNSRRVKDAHKL 223
            +  T S +L                                  L+V  ++ R KDA  +
Sbjct: 259 INYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELI 318

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           F  + +RD++SWN M++ Y+ +G     L+VF EML +   ++  T  + L+ C +    
Sbjct: 319 FRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFF 378

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G+ +H F +      E+   NTL+  Y KC  +  A +VF++M +   V+W ++I G+
Sbjct: 379 TNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGF 438

Query: 344 AREGVFDGAIRLFRGMVREGIEP--DVYAITSILHACAC-DGLLEIGKDVHDYIKENDMQ 400
           A     + A+  F+ ++REG     D   I +IL +C   + L++ G  +H +       
Sbjct: 439 ANNAELNEAVAAFK-LMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFD 497

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM 450
              +V ++L+ MYAKCG +  +  +F+Q+  K    WN +I A          L L V M
Sbjct: 498 LDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRM 557

Query: 451 LQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
                E D    +  L   A LA LE G+++HG  ++ G   D  + NA +DMY KCG L
Sbjct: 558 RSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGEL 617

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             A  +      +  +SW  +I+    HG    A  TF+DM + G++P+ VSF+ +L AC
Sbjct: 618 DDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSAC 677

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           SH GLVDEG  ++  M     I+P +EH  CM+DLL R+G L EA  FI  MP+ P+  +
Sbjct: 678 SHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLV 737

Query: 630 WGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISR 689
           W SLL  CRI+  + L  K A+H+ EL+P +   YVL +NV+A   +WE+V+ +R ++  
Sbjct: 738 WRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGA 797

Query: 690 RGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALIN 749
             ++K P  SW++ KG ++IF  G  +HP  ++I   L  L   +   GY P T Y+L +
Sbjct: 798 HKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQD 857

Query: 750 ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIV 809
            DE +KE  +  HSE++A+AFG++N+P G T+R+ KNLRVCGDCH   KF+S    R+IV
Sbjct: 858 TDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIV 917

Query: 810 LRDSNRFHHFKDGRCSCRGFW 830
           LRD  RFHHF +G CSC  +W
Sbjct: 918 LRDPYRFHHFTNGNCSCSDYW 938



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 230/484 (47%), Gaps = 46/484 (9%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+   G +   + VF+++       WN +M  Y + G++ E++  F+ +  +GI    + 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 201 FSCV---------------------LKCLAV----VGNSRR--------VKDAHKLFDEL 227
            + +                     +KC  +    VG S          V +A K+F+E+
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
            DR+VVSW  ++  Y  NG  ++ +  +K M + G   +   +  V+S C     ++ G 
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            +   ALK     ++S  N+L+ M+  CGD++ A  +F +M ER  +SW S+I+  A+  
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
           + + + R F  M     E +   ++ +L  C     L+ GK VH    +  ++S++ + N
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCN 300

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEP 456
            L+ +Y+  G   DAE +F +MP +D++SWN+M+           AL +F  ML    E 
Sbjct: 301 TLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEI 360

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           + VT    L AC        G+ +HG+++  G+  +  + N ++  Y KC  +  A+ +F
Sbjct: 361 NYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVF 420

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP-DEVSFISVLYAC-SHSGL 574
             +P  D ++W  +I G+  +    +A+A F  MR+      D ++ +++L +C +H  L
Sbjct: 421 QRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDL 480

Query: 575 VDEG 578
           +  G
Sbjct: 481 IKYG 484



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 231/481 (48%), Gaps = 19/481 (3%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           R+  A  +FD +S+R+  SWN M+SGY+  G   + +  F+++  +G       + ++++
Sbjct: 7   RINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVT 66

Query: 276 GCANCGALMF--GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
            C N  ++M   G   H FA+K     ++    + +  Y+  G +  A ++F +M +R+V
Sbjct: 67  AC-NKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNV 125

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSWTS++  Y+  G     I  ++ M  EGI  +   I  ++ +C     + +G  +  +
Sbjct: 126 VSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGH 185

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA---------- 443
             +  +++ +  +N+L+ M+  CG + +A S+FN+M  +D +SWN++I A          
Sbjct: 186 ALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEES 245

Query: 444 LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
              F  M L + E +  T++ +L  C S+  L+ G+ +HG  +++G+ ++  + N ++ +
Sbjct: 246 FRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSV 305

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y   G    A  +F  +P +DLISW  M+A Y   G    A+  F +M     E + V+F
Sbjct: 306 YSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTF 365

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
            S L AC        G +  +       ++ +L     ++    +   ++EA +  + MP
Sbjct: 366 TSALAACLDPEFFTNG-KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMP 424

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY-YVLLANVYAEAEKWEEVK 681
              D   W +L+ G    +  +L E VA      E   +G  Y+ + N+       E++ 
Sbjct: 425 -KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLI 481

Query: 682 K 682
           K
Sbjct: 482 K 482



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 222/488 (45%), Gaps = 50/488 (10%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           +I+  T   +L +C  +  L+ GK VH +  + G+   +  L + L+ ++   G  K+  
Sbjct: 258 EINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLE-SNICLCNTLLSVYSDAGRSKDAE 316

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-KCL--- 208
            +F ++    +  WN ++  Y + G    +L +F +M  +    +  TF+  L  CL   
Sbjct: 317 LIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPE 376

Query: 209 --------------------AVVGNS--------RRVKDAHKLFDELSDRDVVSWNCMIS 240
                                ++GN+         ++ +A K+F  +   D V+WN +I 
Sbjct: 377 FFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIG 436

Query: 241 GYIANGVAEKGLEVFKEMLNLGFN-VDLATMVTVLSGCANCGALM-FGRAVHAFALKACF 298
           G+  N    + +  FK M     + VD  T+V +L  C     L+ +G  +HA  +   F
Sbjct: 437 GFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGF 496

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             +    ++L+ MY+KCGDL  +  +F+++  ++   W ++IA  AR G  + A++L   
Sbjct: 497 DLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVR 556

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M   GIE D +  ++ L   A   +LE G+ +H    +   +   ++ NA MDMY KCG 
Sbjct: 557 MRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGE 616

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPA 467
           + DA  +  Q   +  +SWNT+I           A + F  ML+   +P+ V+  C+L A
Sbjct: 617 LDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSA 676

Query: 468 CASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFD--MIPAKDL 524
           C+    ++ G   +  +   +GI         ++D+  + G LV A +      IP  DL
Sbjct: 677 CSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDL 736

Query: 525 ISWTIMIA 532
           + W  ++A
Sbjct: 737 V-WRSLLA 743



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/397 (23%), Positives = 177/397 (44%), Gaps = 45/397 (11%)

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           K +I+  T+ S L  C D +   +GK +H  +   G+  D+ ++G+ L+  +  C  + E
Sbjct: 357 KKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQ-DELIIGNTLITFYGKCHKMAE 415

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS------------------- 191
            ++VF ++       WN L+  ++      E++  FK M+                    
Sbjct: 416 AKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCL 475

Query: 192 ------------------LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVV 233
                              G   D +  S ++   A  G+   +  +  +FD+L  +   
Sbjct: 476 THEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGD---LHSSSYIFDQLVFKTSS 532

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
            WN +I+     G  E+ L++   M + G   D     T LS  A+   L  G+ +H   
Sbjct: 533 VWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGST 592

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           +K  F  +    N  +DMY KCG+LD A+R+  +  +RS +SW ++I+  AR G F  A 
Sbjct: 593 IKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAK 652

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDM 412
             F  M++ G++P+  +   +L AC+  GL++ G   +  +     +Q  +     ++D+
Sbjct: 653 ETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDL 712

Query: 413 YAKCGSMADAESVFNQMPV--KDIVSWNTMIGALDLF 447
             + G + +AE+   +MP+   D+V W +++ +  ++
Sbjct: 713 LGRSGRLVEAEAFITEMPIPPNDLV-WRSLLASCRIY 748



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 168/340 (49%), Gaps = 22/340 (6%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MYSK G ++ A  VF++M ER+  SW  M++GY R G +  A+  FR +   GI+P  + 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 371 ITSILHACACDGLL-EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           I S++ AC    ++ + G   H +  +  +   ++V  + +  YA  G +++A+ +FN+M
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 430 PVKDIVSWNTMI------GALDLFVAMLQNFEPDGV-----TMACILPACASLAALERGR 478
           P +++VSW +++      G+    +   +    +G+      +A ++ +C  L  +  G 
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           ++ G+ L+ G+    + AN+++ M+  CG +  A S+F+ +  +D ISW  +I+    + 
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
              ++   F+ MR   +  +E+++ ++    S  G VD  +  +    +   ++  LE  
Sbjct: 241 LHEESFRYFHWMR---LVHEEINYTTLSILLSICGSVD--YLKWGKGVHGLAVKYGLESN 295

Query: 599 ACMVDLL----SRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
            C+ + L    S  G   +A      MP   D   W S+L
Sbjct: 296 ICLCNTLLSVYSDAGRSKDAELIFRRMP-ERDLISWNSML 334



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 4/157 (2%)

Query: 52  SASISKTLVCKTKN-YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCAD 108
           S+ I   LV KT + +NA I      G  E+A++++     + I  D   + + L + AD
Sbjct: 519 SSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAAD 578

Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNL 168
           L  LE+G+++H    + G  +D  ++ + +  M+  CG+L +  R+  +  +     WN 
Sbjct: 579 LAMLEEGQQLHGSTIKLGFELDHFIINAAMD-MYGKCGELDDALRILPQPTDRSRLSWNT 637

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           L+   ++ G F ++   F  M  LG+  +  +F C+L
Sbjct: 638 LISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLL 674


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/600 (38%), Positives = 356/600 (59%), Gaps = 42/600 (7%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI---------- 322
           +L  C +  +L  G+ +H+  + +  S +   +N LL++YSKCG LD AI          
Sbjct: 58  LLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKN 117

Query: 323 ---------------------RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
                                ++F++M ER+V +W +M+AG  +    +  + LF  M  
Sbjct: 118 IMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNE 177

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
            G  PD +A+ S+L  CA    L  G+ VH Y+++   + +L V ++L  MY KCGS+ +
Sbjct: 178 LGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGE 237

Query: 422 AESVFNQMPVKDIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACAS 470
            E +   MP +++V+WNT+I            LD +  M +  F PD +T   ++ +C+ 
Sbjct: 238 GERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSE 297

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           LA L +G++IH  +++ G S   +V ++++ MY +CG L  +  +F      D++ W+ M
Sbjct: 298 LATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSM 357

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           IA YG HG G +AI  FN M Q  +E ++V+F+S+LYACSH GL ++G +FF++M  +  
Sbjct: 358 IAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYG 417

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           ++P+LEHY CMVDLL R G++ EA   I  MPV  D   W +LL  C+IH + ++A +++
Sbjct: 418 VKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRIS 477

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
           E VF L+P +   YVLL+N++A  ++W++V  +R+ +  R LKK PG SW+E+K +++ F
Sbjct: 478 EEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQF 537

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
             G  SHP + +I S L+ L  EMK+ GY P     L + D  +KE +L  HSEKLA+AF
Sbjct: 538 CMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAF 597

Query: 771 GILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +L  P G  IRV KNLRVC DCH   K++S+ + REI++RDS+RFHHFK+GRCSC  +W
Sbjct: 598 ALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 228/503 (45%), Gaps = 54/503 (10%)

Query: 48  INPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCA 107
           + P++     T         AE    C  G+L++A +   S   S  +   +  +LQ C 
Sbjct: 6   LRPLTRRHFSTNPSSGSELTAEFTNLCSKGHLKQAFDRFSSHIWS--EPSLFSHLLQSCI 63

Query: 108 DLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWN 167
              SL  GK++HS+I  SG    D  + + L+ ++  CG L     +F  +    +   N
Sbjct: 64  SENSLSLGKQLHSLIITSGCS-SDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCN 122

Query: 168 LLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL 227
           +L++ Y ++G++                                        A K+FDE+
Sbjct: 123 ILINGYFRSGDWV--------------------------------------TARKMFDEM 144

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
            +R+V +WN M++G I     E+GL +F  M  LGF  D   + +VL GCA   AL+ GR
Sbjct: 145 PERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGR 204

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            VH +  K  F   +   ++L  MY KCG L    R+   M  ++VV+W ++IAG A+ G
Sbjct: 205 QVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNG 264

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
             +  +  +  M   G  PD     S++ +C+    L  G+ +H  + +      + V +
Sbjct: 265 YPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVIS 324

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEP 456
           +L+ MY++CG +  +  VF +    D+V W++MI           A+DLF  M Q   E 
Sbjct: 325 SLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEA 384

Query: 457 DGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSL 515
           + VT   +L AC+     E+G +    ++ ++G+         +VD+  + G +  A +L
Sbjct: 385 NDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEAL 444

Query: 516 FDMIPAK-DLISWTIMIAGYGMH 537
              +P K D+I+W  +++   +H
Sbjct: 445 IRSMPVKADVITWKTLLSACKIH 467


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/705 (36%), Positives = 388/705 (55%), Gaps = 45/705 (6%)

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL---------------KCLAV---- 210
           + EY  +G +   L  F  M    +  D  TF  +L                C+A+    
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346

Query: 211 -----VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                V NS        R+   A  +FD +S+RD++SWN +I+G   NG+  + + +F +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406

Query: 258 MLNLGFNVDLATMVTVLSGCANCG-ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
           +L  G   D  TM +VL   ++    L   + VH  A+K     +   +  L+D YS+  
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
            +  A  +FE+     +V+W +M+AGY +       ++LF  M ++G   D + + ++  
Sbjct: 467 CMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
            C     +  GK VH Y  ++     L+VS+ ++DMY KCG M+ A+  F+ +PV D V+
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA 585

Query: 437 WNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYIL 485
           W TMI           A  +F  M L    PD  T+A +  A + L ALE+GR+IH   L
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
           +   + D  V  ++VDMY KCG +  A  LF  I   ++ +W  M+ G   HG G + + 
Sbjct: 646 KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQ 705

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLL 605
            F  M+  GI+PD+V+FI VL ACSHSGLV E ++    M  +  I+P++EHY+C+ D L
Sbjct: 706 LFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADAL 765

Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV 665
            R G + +A   IE M +   A+++ +LL  CR+  + +  ++VA  + ELEP ++  YV
Sbjct: 766 GRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYV 825

Query: 666 LLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIES 725
           LL+N+YA A KW+E+K  R  +    +KK+PG SWIE+K K++IFV    S+   + I  
Sbjct: 826 LLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYR 885

Query: 726 LLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTK 785
            +K +  ++K+EGY P+T + L++ +E EKE AL  HSEKLA+AFG+L+ P    IRV K
Sbjct: 886 KVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIK 945

Query: 786 NLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           NLRVCGDCH   K+++K   REIVLRD+NRFH FKDG CSC  +W
Sbjct: 946 NLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 185/642 (28%), Positives = 323/642 (50%), Gaps = 32/642 (4%)

Query: 74  CEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICESGIVIDD 131
           C V N+++A  +     +  + T   T   +L+LC     +   +  H   C+ G+  D+
Sbjct: 121 CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
            V G+ LV +++  G +KEG+ +F ++    V +WNL++  Y + G  +E++ L     S
Sbjct: 181 FVAGA-LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHS 239

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
            G+  +  T   + +      ++ +VK      D  S  +++  N  +S Y+ +G     
Sbjct: 240 SGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSAL 299

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           L+ F +M+      D  T + +L+      +L  G+ VH  ALK      ++ +N+L++M
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y K      A  VF+ M ER ++SW S+IAG A+ G+   A+ LF  ++R G++PD Y +
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419

Query: 372 TSILHACAC--DGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           TS+L A +   +G L + K VH + IK N++  S +VS AL+D Y++   M +AE +F +
Sbjct: 420 TSVLKAASSLPEG-LSLSKQVHVHAIKINNVSDS-FVSTALIDAYSRNRCMKEAEILFER 477

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALERG 477
               D+V+WN M+            L LF  M +  E  D  T+A +   C  L A+ +G
Sbjct: 478 HNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG 536

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           +++H Y ++ G   D  V++ I+DMYVKCG +  A+  FD IP  D ++WT MI+G   +
Sbjct: 537 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIEN 596

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLE 596
           G    A   F+ MR  G+ PDE +  ++  A S    +++G +   N ++  C  +P + 
Sbjct: 597 GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 656

Query: 597 HYACMVDLLSRTGNLSEAY---RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
               +VD+ ++ G++ +AY   + IEMM +    T W ++L G   H E K   ++ + +
Sbjct: 657 --TSLVDMYAKCGSIDDAYCLFKRIEMMNI----TAWNAMLVGLAQHGEGKETLQLFKQM 710

Query: 654 FEL--EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
             L  +PD   +  +L+         E  K +R      G+K
Sbjct: 711 KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 5/166 (3%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           LM G+  HA  L    + E    N L+ MYSKCG L  A RVF+KM +R +VSW S++A 
Sbjct: 55  LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114

Query: 343 YAREGV-----FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           YA+           A  LFR + ++ +      ++ +L  C   G +   +  H Y  + 
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
            +    +V+ AL+++Y K G + + + +F +MP +D+V WN M+ A
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 13/166 (7%)

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           G+  H  IL    + +R + N ++ MY KCG L  AR +FD +P +DL+SW  ++A Y  
Sbjct: 58  GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117

Query: 537 HGFGC------DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
               C       A   F  +RQ  +    ++   +L  C HSG V   W   +   Y C 
Sbjct: 118 SS-ECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV---WASESFHGYACK 173

Query: 591 IEPKLEHY--ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           I    + +    +V++  + G + E     E MP   D  +W  +L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLML 218


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/687 (36%), Positives = 386/687 (56%), Gaps = 44/687 (6%)

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +M   G+   +Y  S +L+   +  N   +  A  +F+ + + +++ WN M  G+  +  
Sbjct: 24  QMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSD 83

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
               ++++  M++LG   +  T   +L  CA       G+ +H   LK  +  ++  + +
Sbjct: 84  PVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTS 143

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA--------------- 352
           L+ MY K G    A +VF+    R VVS+T++I GYA  G  + A               
Sbjct: 144 LISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSW 203

Query: 353 ----------------IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
                           + LF+ M++  ++PD   + +++ ACA  G +++G+ VH +I +
Sbjct: 204 NAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDD 263

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           + + S+L + NAL+D+Y+KCG +  A  +F  +  KD++SWNTMIG          AL L
Sbjct: 264 HGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLL 323

Query: 447 FVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRH--GISADRNVANAIVDMY 503
           F  ML++ E P+ VTM  ILPACA L A++ GR IH YI +   G++   ++  +++DMY
Sbjct: 324 FQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMY 383

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +  A  +F+ +  + L +   MI G+ MHG    A   F+ MR+ GIEPD+++F+
Sbjct: 384 AKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFV 443

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L ACSHSG++D G R F  M     I PKLEHY CM+DLL   G   EA   I  M +
Sbjct: 444 GLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTM 503

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            PD  IW SLL  C++H  V+L E  A+ + ++EP+N G YVLL+N+YA A +W EV  +
Sbjct: 504 EPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANI 563

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R  ++ +G+KK PGCS IEI   V+ F+ G   HP  ++I  +L+ + + ++  G+ P T
Sbjct: 564 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 623

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              L   +E  K+ AL  HSEKLA+AFG+++   G  + + KNLRVC +CHE  K +SK 
Sbjct: 624 SEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 683

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +REI+ RD  RFHHF+DG CSC  +W
Sbjct: 684 YKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 200/448 (44%), Gaps = 88/448 (19%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID------------------------ 130
           ++ T+  +L+ CA LK  ++G+++H  + + G  +D                        
Sbjct: 102 NSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVF 161

Query: 131 ------DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
                 D V  + L+  + + G ++  +++F++I    V  WN ++  Y+ TGN KE+L 
Sbjct: 162 DGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALD 221

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK---------------------- 222
           LFK+M    +  D  T   V+   A  G+ +  +  H                       
Sbjct: 222 LFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYS 281

Query: 223 ----------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
                     LF  LS++DV+SWN MI GY    + ++ L +F+EML  G N +  TM++
Sbjct: 282 KCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLS 341

Query: 273 VLSGCANCGALMFGRAVHAFALKAC--FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           +L  CA  GA+ FGR +H +  K     +   S   +L+DMY+KCGD++ A +VF  M  
Sbjct: 342 ILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHH 401

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R++ +  +MI G+A  G  + A  +F  M + GIEPD      +L AC+  G+L++G+ +
Sbjct: 402 RTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRI 461

Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVA 449
              + +N  +   L     ++D+    G   +AE + N M                    
Sbjct: 462 FRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTM-------------------- 501

Query: 450 MLQNFEPDGVTMACILPACASLAALERG 477
                EPDGV    +L AC     +E G
Sbjct: 502 ---TMEPDGVIWCSLLKACKMHGNVELG 526



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 93/415 (22%), Positives = 170/415 (40%), Gaps = 86/415 (20%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + + GN ++A+++     K+ +  D  T  +++  CA   S++ G++VHS I
Sbjct: 202 SWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWI 261

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+  +  ++ + L+ ++  CG+++    +F  + N  V  WN ++  Y+    +KE+
Sbjct: 262 DDHGLGSNLKIVNA-LIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEA 320

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----------SRRVKD------------ 219
           L LF++M   G   +  T   +L   A +G             +R+K             
Sbjct: 321 LLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLI 380

Query: 220 -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      AH++F+ +  R + + N MI G+  +G A    ++F  M   G   D  
Sbjct: 381 DMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDI 440

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V +LS C++ G L  GR                                   R+F  M
Sbjct: 441 TFVGLLSACSHSGMLDLGR-----------------------------------RIFRSM 465

Query: 329 GERSVVS-----WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
            +   ++     +  MI      G+F  A  +   M    +EPD     S+L AC   G 
Sbjct: 466 TQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMT---MEPDGVIWCSLLKACKMHGN 522

Query: 384 LEIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCG---SMADAESVFNQMPVKDI 434
           +E+G+      IK        YV   L ++YA  G    +A+  ++ N   +K +
Sbjct: 523 VELGESFAQKLIKIEPENPGSYV--LLSNIYATAGRWNEVANIRALLNDKGMKKV 575


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 266/779 (34%), Positives = 402/779 (51%), Gaps = 43/779 (5%)

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF-MFVTCGDLK 149
           K+  D  TY    +L   L+SL     +H        +    +    L+   + + GDL 
Sbjct: 36  KTGFDVLTY----RLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLP 91

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK--- 206
             + +F    +     W ++M  ++  G   ++L LF+ M   G+  D  T + VL    
Sbjct: 92  AAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG 151

Query: 207 CLAVVGNSRRVK---DAH---------------------KLFDELSDRDVVSWNCMISGY 242
           C     +   +K   D H                     ++F E+ D+D V++N M+ G 
Sbjct: 152 CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGC 211

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
              G+  + L++F  M   G      T  ++L+  A    L+ G  VHA  L++     +
Sbjct: 212 SKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNV 271

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
             NN+LLD YSKC  LD   R+F++M ER  VS+  +IA YA        +RLFR M + 
Sbjct: 272 FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKL 331

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G +  V    ++L        + IGK +H  +    + S   + NAL+DMY+KCG +  A
Sbjct: 332 GFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAA 391

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASL 471
           +S F+    K  +SW  +I           AL LF  M +    PD  T + I+ A +SL
Sbjct: 392 KSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSL 451

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           A +  GR++H Y++R G  +     + +VDMY KCG L  A   FD +P ++ ISW  +I
Sbjct: 452 AMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVI 511

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           + Y  +G   +AI  F  M   G  PD V+F+SVL ACSH+GL DE  ++F++M+++ +I
Sbjct: 512 SAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSI 571

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P  EHYAC++D L R G  S+  + +  MP   D  IW S+L  CRIH   +LA   A+
Sbjct: 572 SPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAAD 631

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            +F +EP +   YV+L+N+YA A +WE+   +++ +  RG++K  G SW+EIK K+  F 
Sbjct: 632 KLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFA 691

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFG 771
           +   + P   +I+  L RL  EM ++GY P    AL   D   K  +L  HSE+LA+AF 
Sbjct: 692 SNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFA 751

Query: 772 ILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           ++N PAG  IR+ KNL  C DCH + K +SK   R+I++RDS RFHHFKDG CSC  +W
Sbjct: 752 LMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 193/413 (46%), Gaps = 37/413 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
            YNA +    + G   +A+++  +  ++ I     T+ SIL + A +  L  G +VH+++
Sbjct: 203 TYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALV 262

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             S  V++  V  S L F +  C  L + RR+F+++       +N+++  Y+        
Sbjct: 263 LRSTSVLNVFVNNSLLDF-YSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATV 321

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL------------------- 223
           L LF++MQ LG       ++ +L     + +    K  H                     
Sbjct: 322 LRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDM 381

Query: 224 -------------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                        F   S++  +SW  +I+GY+ NG  E+ L++F +M   G   D AT 
Sbjct: 382 YSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATF 441

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +++   ++   +  GR +H++ +++ +   +   + L+DMY+KCG LD A+R F++M E
Sbjct: 442 SSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPE 501

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL-EIGKD 389
           R+ +SW ++I+ YA  G    AI++F GM+  G  PD     S+L AC+ +GL  E  K 
Sbjct: 502 RNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKY 561

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
            H    +  +         ++D   + G  +  + +  +MP K D + W +++
Sbjct: 562 FHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 614



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 34/335 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G  E+A+++     ++  + D  T+ SI++  + L  +  G+++HS +
Sbjct: 405 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG        GS LV M+  CG L E  R F+++       WN ++  Y+  G  K +
Sbjct: 465 IRSGYK-SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNA 523

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNC 237
           + +F+ M   G   DS TF   L  LA   ++    +  K F  +  +  +S     + C
Sbjct: 524 IKMFEGMLHCGFNPDSVTF---LSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYAC 580

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I      G      +V K ++ + F  D     ++L  C   G     R V A  L   
Sbjct: 581 VIDTLGRVGCFS---QVQKMLVEMPFKADPIIWTSILHSCRIHGNQELAR-VAADKLFGM 636

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV-----VSWTSM---IAGYAREGVF 349
              + +    L ++Y++ G  + A  V + M +R V      SW  +   I  +A   + 
Sbjct: 637 EPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLT 696

Query: 350 DGAI--------RLFRGMVREGIEPDVYAITSILH 376
              I        RL++ M ++G +PD   IT  LH
Sbjct: 697 SPMIDEIKDELDRLYKEMDKQGYKPD---ITCALH 728


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/727 (35%), Positives = 385/727 (52%), Gaps = 38/727 (5%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           + + GDL   + +F    +     W ++M  ++  G   ++L LF+ M   G+  D  T 
Sbjct: 84  YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTV 143

Query: 202 SCVLK---CLAVVGNSRRVK---DAH---------------------KLFDELSDRDVVS 234
           + VL    C     +   +K   D H                     ++F E+ D+D V+
Sbjct: 144 TTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVT 203

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           +N M+ G    G+  + L++F  M   G      T  ++L+  A    L+ G  VHA  L
Sbjct: 204 YNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVL 263

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           ++     +  NN+LLD YSKC  LD   R+F++M ER  VS+  +IA YA        +R
Sbjct: 264 RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLR 323

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LFR M + G +  V    ++L        + IGK +H  +    + S   + NAL+DMY+
Sbjct: 324 LFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYS 383

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMAC 463
           KCG +  A+S F+    K  +SW  +I           AL LF  M +    PD  T + 
Sbjct: 384 KCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSS 443

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           I+ A +SLA +  GR++H Y++R G  +     + +VDMY KCG L  A   FD +P ++
Sbjct: 444 IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 503

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
            ISW  +I+ Y  +G   +AI  F  M   G  PD V+F+SVL ACSH+GL DE  ++F+
Sbjct: 504 SISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFH 563

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
           +M+++ +I P  EHYAC++D L R G  S+  + +  MP   D  IW S+L  CRIH   
Sbjct: 564 LMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQ 623

Query: 644 KLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
           +LA   A+ +F +EP +   YV+L+N+YA A +WE+   +++ +  RG++K  G SW+EI
Sbjct: 624 ELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEI 683

Query: 704 KGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHS 763
           K K+  F +   + P   +I+  L RL  EM ++GY P    AL   D   K  +L  HS
Sbjct: 684 KQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHS 743

Query: 764 EKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGR 823
           E+LA+AF ++N PAG  IR+ KNL  C DCH + K +SK   R+I++RDS RFHHFKDG 
Sbjct: 744 ERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGV 803

Query: 824 CSCRGFW 830
           CSC  +W
Sbjct: 804 CSCGDYW 810



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 152/542 (28%), Positives = 262/542 (48%), Gaps = 62/542 (11%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
            ++ G L   R +F+++ +  +F  NL++  YS +G+   + +LF               
Sbjct: 53  LLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF--------------- 97

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                          +   H        R+  +W  M+  + A G     L +F+ ML  
Sbjct: 98  ---------------LSSPH--------RNATTWTIMMRAHAAAGRTSDALSLFRAMLGE 134

Query: 262 GFNVDLATMVTVLS--GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
           G   D  T+ TVL+  GC          ++H FA+K      +   NTLLD Y K G L 
Sbjct: 135 GVIPDRVTVTTVLNLPGCTVP-------SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLA 187

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A RVF +M ++  V++ +M+ G ++EG+   A++LF  M R GI    +  +SIL   A
Sbjct: 188 AARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAA 247

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               L +G  VH  +  +    +++V+N+L+D Y+KC  + D   +F++MP +D VS+N 
Sbjct: 248 GMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNV 307

Query: 440 MIGA----------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           +I A          L LF  M +  F+   +  A +L    SL  +  G++IH  ++  G
Sbjct: 308 IIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLG 367

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
           ++++  + NA++DMY KCG+L  A+S F     K  ISWT +I GY  +G   +A+  F+
Sbjct: 368 LASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFS 427

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
           DMR+AG+ PD  +F S++ A S   ++  G +  + +      +  +   + +VD+ ++ 
Sbjct: 428 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL-IRSGYKSSVFSGSVLVDMYAKC 486

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVL 666
           G L EA R  + MP   ++  W +++     + E K A K+ E +      PD+  +  +
Sbjct: 487 GCLDEALRTFDEMP-ERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSV 545

Query: 667 LA 668
           LA
Sbjct: 546 LA 547



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 193/413 (46%), Gaps = 37/413 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
            YNA +    + G   +A+++  +  ++ I     T+ SIL + A +  L  G +VH+++
Sbjct: 203 TYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALV 262

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             S  V++  V  S L F +  C  L + RR+F+++       +N+++  Y+        
Sbjct: 263 LRSTSVLNVFVNNSLLDF-YSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATV 321

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL------------------- 223
           L LF++MQ LG       ++ +L     + +    K  H                     
Sbjct: 322 LRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDM 381

Query: 224 -------------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                        F   S++  +SW  +I+GY+ NG  E+ L++F +M   G   D AT 
Sbjct: 382 YSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATF 441

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +++   ++   +  GR +H++ +++ +   +   + L+DMY+KCG LD A+R F++M E
Sbjct: 442 SSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPE 501

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL-EIGKD 389
           R+ +SW ++I+ YA  G    AI++F GM+  G  PD     S+L AC+ +GL  E  K 
Sbjct: 502 RNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKY 561

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
            H    +  +         ++D   + G  +  + +  +MP K D + W +++
Sbjct: 562 FHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 614



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 83/367 (22%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y ++L +   L  +  GK++H+ +   G+  +D +LG+ L+ M+  CG L   +  F+  
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASED-LLGNALIDMYSKCGMLDAAKSNFSNR 398

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSR 215
                  W  L+  Y + G  +E+L LF  M+  G+  D  TFS ++K    LA++G  R
Sbjct: 399 SEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGR 458

Query: 216 RVK-----------------------------DAHKLFDELSDRDVVSWNCMISGYIANG 246
           ++                              +A + FDE+ +R+ +SWN +IS Y   G
Sbjct: 459 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 518

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
            A+  +++F+ ML+ GFN D  T ++VL+ C++ G                         
Sbjct: 519 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGL------------------------ 554

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTS----MIAGYAREGVFDGAIRLFRGMVR 361
                       D  ++ F  M  + S+  W      +I    R G F    ++   +V 
Sbjct: 555 -----------ADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKM---LVE 600

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYI---KENDMQSSLYVSNALMDMYAKCGS 418
              + D    TSILH+C   G  E+ +   D +   +  D    + +SN    +YA+ G 
Sbjct: 601 MPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSN----IYARAGQ 656

Query: 419 MADAESV 425
             DA  V
Sbjct: 657 WEDAACV 663



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 34/335 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G  E+A+++     ++  + D  T+ SI++  + L  +  G+++HS +
Sbjct: 405 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG        GS LV M+  CG L E  R F+++       WN ++  Y+  G  K +
Sbjct: 465 IRSGYK-SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNA 523

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNC 237
           + +F+ M   G   DS TF   L  LA   ++    +  K F  +  +  +S     + C
Sbjct: 524 IKMFEGMLHCGFNPDSVTF---LSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYAC 580

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I      G      +V K ++ + F  D     ++L  C   G     R V A  L   
Sbjct: 581 VIDTLGRVGCFS---QVQKMLVEMPFKADPIIWTSILHSCRIHGNQELAR-VAADKLFGM 636

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV-----VSWTSM---IAGYAREGVF 349
              + +    L ++Y++ G  + A  V + M +R V      SW  +   I  +A   + 
Sbjct: 637 EPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLT 696

Query: 350 DGAI--------RLFRGMVREGIEPDVYAITSILH 376
              I        RL++ M ++G +PD   IT  LH
Sbjct: 697 SPMIDEIKDELDRLYKEMDKQGYKPD---ITCALH 728


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/556 (41%), Positives = 351/556 (63%), Gaps = 12/556 (2%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ +H   LK     ++   N LL+MY K   L  A ++F++M ER+ +S+ ++I GYA 
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
              F  AI LF  + RE + P+ +   S+L ACA    L +G  +H ++ +  + S ++V
Sbjct: 117 SVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 175

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NF 454
           SNALMD+YAKCG M ++  +F + P ++ V+WNT+I           AL LF+ ML+   
Sbjct: 176 SNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRV 235

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
           +   VT +  L ACASLAALE G +IH   ++     D  V NA++DMY KCG +  AR 
Sbjct: 236 QATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARL 295

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +FD++  +D +SW  MI+GY MHG G +A+  F+ M++  ++PD+++F+ VL AC+++GL
Sbjct: 296 VFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGL 355

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           +D+G  +F  M  +  IEP +EHY CMV LL R G+L +A + I+ +P  P   +W +LL
Sbjct: 356 LDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             C IH++++L    A+ V E+EP +   +VLL+N+YA A++W+ V  +R+ + R+G+KK
Sbjct: 416 GACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKK 475

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
            PG SWIE +G V+ F  G +SHP  + I  +L+ L ++ K+ GY P     L++ ++ E
Sbjct: 476 EPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEE 535

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
           KE  L  HSE+LA++FGI+  P+G  IR+ KNLR+C DCH   K +SK  +REIV+RD N
Sbjct: 536 KERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDIN 595

Query: 815 RFHHFKDGRCSCRGFW 830
           RFHHF++G CSC  +W
Sbjct: 596 RFHHFQEGLCSCGDYW 611



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 172/336 (51%), Gaps = 22/336 (6%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF----KEMLNLGFNVDLATMVTVL 274
           DA KLFDE+ +R+ +S+  +I GY  +    + +E+F    +E+L   F     T  +VL
Sbjct: 91  DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVLPNQF-----TFASVL 145

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             CA    L  G  +H   +K     ++  +N L+D+Y+KCG ++ ++ +F +   R+ V
Sbjct: 146 QACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDV 205

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           +W ++I G+ + G  + A+RLF  M+   ++      +S L ACA    LE G  +H   
Sbjct: 206 TWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLT 265

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
            +      + V+NAL+DMYAKCGS+ DA  VF+ M  +D VSWN MI           AL
Sbjct: 266 VKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREAL 325

Query: 445 DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDM 502
            +F  M +   +PD +T   +L ACA+   L++G+     +++ HGI         +V +
Sbjct: 326 RIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWL 385

Query: 503 YVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
             + G L  A  L D IP +  ++ W  ++    +H
Sbjct: 386 LGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIH 421



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 184/386 (47%), Gaps = 36/386 (9%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S+ ++  Y + LQ C        GK +H  I + G  +D     + L+ M+V    L + 
Sbjct: 34  SEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLD-LFAWNILLNMYVKSDFLCDA 92

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV- 210
            ++F+++       +  L+  Y+++  F E++ LF ++    +  + +TF+ VL+  A  
Sbjct: 93  SKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHR-EVLPNQFTFASVLQACATM 151

Query: 211 ----VGNS---------------------------RRVKDAHKLFDELSDRDVVSWNCMI 239
               +GN                             R++++ +LF E   R+ V+WN +I
Sbjct: 152 EGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVI 211

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
            G++  G  EK L +F  ML         T  + L  CA+  AL  G  +H+  +K  F 
Sbjct: 212 VGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFD 271

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
           K+I   N L+DMY+KCG +  A  VF+ M ++  VSW +MI+GY+  G+   A+R+F  M
Sbjct: 272 KDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKM 331

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGS 418
               ++PD      +L ACA  GLL+ G+      I+++ ++  +     ++ +  + G 
Sbjct: 332 QETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGH 391

Query: 419 MADAESVFNQMPVK-DIVSWNTMIGA 443
           +  A  + +++P +  ++ W  ++GA
Sbjct: 392 LDKAVKLIDEIPFQPSVMVWRALLGA 417



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 163/318 (51%), Gaps = 18/318 (5%)

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           E + +A  + L  C        GK +H  I +      L+  N L++MY K   + DA  
Sbjct: 35  EFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASK 94

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAAL 474
           +F++MP ++ +S+ T+I           A++LFV + +   P+  T A +L ACA++  L
Sbjct: 95  LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVLPNQFTFASVLQACATMEGL 154

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
             G +IH ++++ G+ +D  V+NA++D+Y KCG +  +  LF   P ++ ++W  +I G+
Sbjct: 155 NLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGH 214

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
              G G  A+  F +M +  ++  EV++ S L AC+    ++ G +  ++   +   +  
Sbjct: 215 VQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLT-VKTTFDKD 273

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH----HEVKLAEKVA 650
           +     ++D+ ++ G++ +A    ++M    D   W +++ G  +H      +++ +K+ 
Sbjct: 274 IVVTNALIDMYAKCGSIKDARLVFDLMN-KQDEVSWNAMISGYSMHGLGREALRIFDKMQ 332

Query: 651 EHVFELEPDNTGYYVLLA 668
           E   E++PD   +  +L+
Sbjct: 333 E--TEVKPDKLTFVGVLS 348



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 169/419 (40%), Gaps = 79/419 (18%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTK-TYCSILQLCADLKSLEDGKKVHSIICESG 126
           AE  RF E      A+E+     +  +  + T+ S+LQ CA ++ L  G ++H  + + G
Sbjct: 115 AESVRFLE------AIELFVRLHREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIG 168

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
           +   D  + + L+ ++  CG ++    +F +  +     WN ++  + + G+ +++L LF
Sbjct: 169 LH-SDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLF 227

Query: 187 KKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR------- 215
             M    + A   T+S  L+  A                        VV N+        
Sbjct: 228 LNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKC 287

Query: 216 -RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             +KDA  +FD ++ +D VSWN MISGY  +G+  + L +F +M       D  T V VL
Sbjct: 288 GSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVL 347

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S CAN G L  G+A         F+  I                D  I       E  + 
Sbjct: 348 SACANAGLLDQGQAY--------FTSMIQ---------------DHGI-------EPCIE 377

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
            +T M+    R G  D A++L   +     +P V    ++L AC     +E+G+     +
Sbjct: 378 HYTCMVWLLGRGGHLDKAVKLIDEI---PFQPSVMVWRALLGACVIHNDIELGRISAQRV 434

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VSWNTMIGALDLFV 448
            E + Q        L +MYA      +  SV   M  K +     +SW    G +  F 
Sbjct: 435 LEMEPQDKA-THVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFT 492



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 9/273 (3%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
            +N  I    ++G+ EKA+ +  +  + ++     TY S L+ CA L +LE G ++HS+ 
Sbjct: 206 TWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLT 265

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++     D V+ + L+ M+  CG +K+ R VF+ ++      WN ++  YS  G  +E+
Sbjct: 266 VKTTF-DKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREA 324

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG--NSRRVKDAHKLFDELSDRDVVSWNCMIS 240
           L +F KMQ   +  D  TF  VL   A  G  +  +      + D   +  +  + CM+ 
Sbjct: 325 LRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVW 384

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
                G  +K +++  E   + F   +     +L  C     +  GR + A  +     +
Sbjct: 385 LLGRGGHLDKAVKLIDE---IPFQPSVMVWRALLGACVIHNDIELGR-ISAQRVLEMEPQ 440

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           + + +  L +MY+     D    V + M  + V
Sbjct: 441 DKATHVLLSNMYATAKRWDNVASVRKNMKRKGV 473



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 9/193 (4%)

Query: 447 FVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
           FV  +   E +    A  L  C       RG+ +H  IL+ G   D    N +++MYVK 
Sbjct: 27  FVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKS 86

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             L  A  LFD +P ++ IS+  +I GY       +AI  F  + +  + P++ +F SVL
Sbjct: 87  DFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVL 145

Query: 567 YACSHSGLVDEGWRFFNMMR---YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            AC+      EG    N +     +  +   +     ++D+ ++ G +  +       P 
Sbjct: 146 QACA----TMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPH 201

Query: 624 APDATIWGSLLCG 636
             D T W +++ G
Sbjct: 202 RNDVT-WNTVIVG 213


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/737 (33%), Positives = 396/737 (53%), Gaps = 44/737 (5%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           ++  ++  G+L E R +F+ +       W +L+  Y++   F+E+  LF +M   GI  D
Sbjct: 138 MIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPD 197

Query: 198 SYTFSCVLKCLA------------------------VVGNS--------RRVKDAHKLFD 225
             + + +L                            VV NS        R +  A +LF+
Sbjct: 198 HVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFN 257

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
           ++ +RD V++N +++GY   G   + + +F +M  +G+     T   +L+       + F
Sbjct: 258 DIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEF 317

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ VH F +K  F   +   N LLD YSK   +  A ++F +M E   +S+  ++  YA 
Sbjct: 318 GQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAW 377

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G    ++ LF+ +   G +   +   ++L   A    L+IG+ +H      D  S + V
Sbjct: 378 NGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILV 437

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQ-NF 454
            N+L+DMYAKCG   +A  +F+ + ++  V W  MI +          L LFV M +   
Sbjct: 438 GNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKI 497

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
             D  T A I+ ACASLA+L  G+++H +I+  G  ++    +A+VDMY KCG +  A  
Sbjct: 498 GADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQ 557

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +F  +P ++ +SW  +I+ Y  +G G   +  F +M ++G++PD VS +S+L ACSH GL
Sbjct: 558 MFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGL 617

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           V+EG ++F+ M     + PK EHYA  +D+L R G   EA + +  MP  PD  +W S+L
Sbjct: 618 VEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVL 677

Query: 635 CGCRIHHEVKLAEKVAEHVFELEP-DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
             C IH   +LA+K A  +F ++   +   YV ++N+YA A +W+ V K+++ +  RG+K
Sbjct: 678 NSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVK 737

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           K P  SW+EIK K ++F A   +HP  ++I   L  L  +M ++GY P +  AL N DE 
Sbjct: 738 KVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEE 797

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
            K  +L  HSE++A+AF +++ P G  I V KNLR C DCH   K +SK  RREI +RDS
Sbjct: 798 VKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRDS 857

Query: 814 NRFHHFKDGRCSCRGFW 830
           +RFHHF+DG C+CR +W
Sbjct: 858 SRFHHFRDGFCTCRDYW 874



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 236/508 (46%), Gaps = 51/508 (10%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           LV  F+  GDL   R++F+++ +  +F  N ++  Y K+GN  E                
Sbjct: 107 LVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSE---------------- 150

Query: 198 SYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                                 A  LFD +  R  V+W  +I GY  N    +   +F E
Sbjct: 151 ----------------------ARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIE 188

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           M   G + D  ++ T+LSG     ++   R VH+  +K  +   +  +N+LLD Y K   
Sbjct: 189 MGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRS 248

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           L  A ++F  + ER  V++ +++ GY++EG    AI LF  M   G  P  +   +IL A
Sbjct: 249 LGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
                 +E G+ VH ++ + +   +++V+NAL+D Y+K   + +A  +F +MP  D +S+
Sbjct: 309 GIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISY 368

Query: 438 NTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR 486
           N ++           +L+LF  +    F+      A +L   A    L+ GR+IH   + 
Sbjct: 369 NVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIV 428

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
               ++  V N++VDMY KCG    A  +F  +  +  + WT MI+ Y   G   D +  
Sbjct: 429 TDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKL 488

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
           F +M++A I  D  ++ S++ AC+    +  G +  + +     I       A +VD+ +
Sbjct: 489 FVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSA-LVDMYA 547

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           + G++ +A +  + MPV  ++  W +L+
Sbjct: 548 KCGSIKDALQMFQEMPVR-NSVSWNALI 574



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 185/389 (47%), Gaps = 46/389 (11%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG------------------- 329
           V A  +K  F+     +N L+  + + GDL+GA ++F++M                    
Sbjct: 88  VDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGN 147

Query: 330 ------------ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
                       +R+ V+WT +I GYA+   F  A  LF  M R GI+PD  ++ ++L  
Sbjct: 148 LSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSG 207

Query: 378 -CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
               D + E+ + VH ++ +    S+L VSN+L+D Y K  S+  A  +FN +P +D V+
Sbjct: 208 FTEFDSVNEV-RQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVT 266

Query: 437 WNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYIL 485
           +N ++           A++LF  M +  + P   T A IL A   L  +E G+++HG+++
Sbjct: 267 FNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVV 326

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
           +     +  VANA++D Y K   +V A  LF  +P  D IS+ +++  Y  +G   +++ 
Sbjct: 327 KCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLE 386

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLL 605
            F +++  G +     F ++L   + S  +D G +  +       I   L   + +VD+ 
Sbjct: 387 LFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNS-LVDMY 445

Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           ++ G   EA R    + +   +  W +++
Sbjct: 446 AKCGEFGEANRIFSDLAIQ-SSVPWTAMI 473


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/572 (41%), Positives = 350/572 (61%), Gaps = 12/572 (2%)

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +VL  C    +L  GR +H   L +    +      L+D+Y+ CG +  A R+F+ M +
Sbjct: 66  TSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPK 125

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R+V  W  +I  YAR+G  + AI+L+RGMV  G+EPD +     L ACA    LE G++V
Sbjct: 126 RNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREV 185

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA------- 443
           H+ +        ++V   L+DMYAKCG + DA +VF+++ V+D V WN+MI A       
Sbjct: 186 HERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRP 245

Query: 444 ---LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
              L L   M  N   P   T+   + A A  AAL RGRE+HG+  R G      +  ++
Sbjct: 246 MEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSL 305

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR-QAGIEPD 558
           VDMY K G + +AR LF+ +  ++L+SW  MI GYGMHG   +A+  FN MR +A + PD
Sbjct: 306 VDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPD 365

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            ++F+ VL AC+H G+V E   FF +M    +I+P ++H+ C+VD+L   G   EAY  I
Sbjct: 366 NITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLI 425

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           + MP+ PD+ IWG+LL GC+IH  V+L E   + + ELEP++ G YVLL+N+YA++ KWE
Sbjct: 426 KGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWE 485

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           +  ++R+ ++ RGLKK  GCSWIE+KGK + F+ G +SHP + +I   L+RL   M   G
Sbjct: 486 KAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAG 545

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
           Y P T     +  + EK   +  HSE+LA+AFG+++ P+G  + VTKNLRVC DCH + K
Sbjct: 546 YMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIK 605

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +S+  +REI++RD NR+HHF +G CSC+ +W
Sbjct: 606 LISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 185/378 (48%), Gaps = 36/378 (9%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y S+LQ C   +SL  G+++H  +  SG+   D VL +KLV ++  CG +   RR+F+ +
Sbjct: 65  YTSVLQSCVASRSLGTGRQLHGRLLVSGLG-PDTVLATKLVDLYAACGLVGHARRLFDGM 123

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC--------------- 203
               VF+WN+L+  Y++ G  + ++ L++ M   G+  D++T+                 
Sbjct: 124 PKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGR 183

Query: 204 --------------VLKCLAVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                         +  C  +V    +   V DA  +FD +  RD V WN MI+ Y  NG
Sbjct: 184 EVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNG 243

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
              + L + ++M   G    +AT+V+ +S  A+  AL  GR +H F  +  F ++     
Sbjct: 244 RPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKT 303

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGIE 365
           +L+DMY+K G +  A  +FE++ +R +VSW +MI GY   G FD A++LF  M V   + 
Sbjct: 304 SLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVT 363

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAES 424
           PD      +L AC   G+++  K+    + +   ++ ++     L+D+    G   +A  
Sbjct: 364 PDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYD 423

Query: 425 VFNQMPVK-DIVSWNTMI 441
           +   MP++ D   W  ++
Sbjct: 424 LIKGMPMQPDSGIWGALL 441



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 163/359 (45%), Gaps = 17/359 (4%)

Query: 193 GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL 252
           G+  D+   + ++   A  G    V  A +LFD +  R+V  WN +I  Y  +G  E  +
Sbjct: 92  GLGPDTVLATKLVDLYAACG---LVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAI 148

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           ++++ M++ G   D  T    L  CA    L  GR VH   L   + +++     L+DMY
Sbjct: 149 QLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMY 208

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           +KCG +D A  VF+++  R  V W SMIA Y + G    A+ L R M   G+ P +  + 
Sbjct: 209 AKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLV 268

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           S + A A    L  G+++H +           +  +L+DMYAK G +  A  +F Q+  +
Sbjct: 269 STISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKR 328

Query: 433 DIVSWNTMI----------GALDLFVAML--QNFEPDGVTMACILPACASLAALERGREI 480
           ++VSWN MI           AL LF  M       PD +T   +L AC     ++  +E 
Sbjct: 329 ELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEF 388

Query: 481 HGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
            G ++  + I         +VD+    G    A  L   +P + D   W  ++ G  +H
Sbjct: 389 FGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIH 447



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 161/393 (40%), Gaps = 75/393 (19%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  TY   L+ CA L  LE G++VH  +  +    +D  + + LV M+  CG + + R V
Sbjct: 162 DNFTYPLALKACAALLDLETGREVHERVLGTHWG-EDMFVCAGLVDMYAKCGCVDDARAV 220

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL--------- 205
           F++I      +WN ++  Y + G   E+L L + M + G+     T    +         
Sbjct: 221 FDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAAL 280

Query: 206 -----------------------KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                    + +   S  V+ A  LF++L  R++VSWN MI GY
Sbjct: 281 PRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGY 340

Query: 243 IANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
             +G  ++ L++F +M +      D  T V VLS C + G  M   A   F L       
Sbjct: 341 GMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGG--MVKEAKEFFGL------- 391

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
                 ++D+YS                + +V  +T ++      G F+ A  L +GM  
Sbjct: 392 ------MVDVYSI---------------KPTVQHFTCLVDVLGHAGRFEEAYDLIKGMP- 429

Query: 362 EGIEPDVYAITSILHACACDGLLEIGK-DVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
             ++PD     ++L+ C     +E+G+  +   I+     +  YV   L ++YA+ G   
Sbjct: 430 --MQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYV--LLSNIYAQSGKWE 485

Query: 421 DAESVFNQMP---VKDIV--SWNTMIGALDLFV 448
            A  V   M    +K I+  SW  + G    F+
Sbjct: 486 KAARVRKLMTNRGLKKIIGCSWIELKGKTHGFL 518


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/697 (37%), Positives = 384/697 (55%), Gaps = 54/697 (7%)

Query: 186 FKKMQSLGIAA---DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR---DVVSWNCMI 239
           FK++ SL I     ++      L     V  S  +  A  LF+E       +V  WN +I
Sbjct: 44  FKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLI 103

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
            GY  +      L +F  ML  G   +  T   +   C    A   G+ +HA ALK    
Sbjct: 104 RGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALH 163

Query: 300 KEISFNNTLLDMYSKCGD-------------------------------LDGAIRVFEKM 328
                + +++ MY+  G+                               LD A R+F+++
Sbjct: 164 FNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEI 223

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             + VVSW +MI+GY + G F+ AI  F  M    + P+   +  +L AC      E+GK
Sbjct: 224 PVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGK 283

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
            +  ++++N   S+L ++NAL+DMY KCG    A  +F+ +  KD++SWNTMIG      
Sbjct: 284 WIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLS 343

Query: 443 ----ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYI---LRHGISADRN 494
               AL LF  ML+ N +P+ VT   IL ACA L AL+ G+ +H YI   LR+  S++ +
Sbjct: 344 LYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRN--SSNAS 401

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           +  +++DMY KCG +  A  +F  + +++L SW  M++G+ MHG    A+A F++M   G
Sbjct: 402 LWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKG 461

Query: 555 I-EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           +  PD+++F+ VL AC+ +GLVD G ++F  M  +  I PKL+HY CM+DLL+R     E
Sbjct: 462 LFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEE 521

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A   ++ M + PD  IWGSLL  C+ H  V+  E VAE +F+LEP+N G +VLL+N+YA 
Sbjct: 522 AEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAG 581

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
           A +W++V ++R +++ +G+KK PGC+ IEI G V+ F+ G   HP    I  +L  +   
Sbjct: 582 AGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKL 641

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           ++  G+ P T   L + DE  KE AL  HSEKLA++FG++    G TIR+ KNLRVCG+C
Sbjct: 642 LEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNC 701

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H   K +SK   REI+ RD NRFHHFKDG CSC   W
Sbjct: 702 HSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 217/461 (47%), Gaps = 58/461 (12%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T+  + + C   K+  +GK++H+   +  +  +  V  S ++ M+ + G++   R V
Sbjct: 130 NSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTS-VIHMYASVGEMDFARLV 188

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+K        +  L+  Y   G                             CL      
Sbjct: 189 FDKSSLRDAVSFTALITGYVSQG-----------------------------CL------ 213

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
               DA +LFDE+  +DVVSWN MISGY+ +G  E+ +  F EM       + +TMV VL
Sbjct: 214 ---DDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVL 270

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S C +  +   G+ + ++     F   +   N L+DMY KCG+ D A  +F+ + E+ V+
Sbjct: 271 SACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVI 330

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW +MI GY+   +++ A+ LF  M+R  ++P+      ILHACAC G L++GK VH YI
Sbjct: 331 SWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYI 390

Query: 395 KE---NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
            +   N   +SL+ S  L+DMYAKCG +  AE VF  M  +++ SWN M+          
Sbjct: 391 DKNLRNSSNASLWTS--LIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAE 448

Query: 443 -ALDLFVAMLQN--FEPDGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVANA 498
            AL LF  M+    F PD +T   +L AC     ++ G +     I  +GIS        
Sbjct: 449 RALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGC 508

Query: 499 IVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMHG 538
           ++D+  +      A  L  +M    D   W  +++    HG
Sbjct: 509 MIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHG 549



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 166/406 (40%), Gaps = 81/406 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + + G  E+A+   Y  +++ +  +  T   +L  C   +S E GK + S +
Sbjct: 230 SWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWV 289

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G    +  L + L+ M+  CG+    R +F+ I+   V  WN ++  YS    ++E+
Sbjct: 290 RDNGFG-SNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEA 348

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG--------------NSRR------------ 216
           L LF+ M    +  +  TF  +L   A +G              N R             
Sbjct: 349 LALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLID 408

Query: 217 -------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLA 268
                  ++ A ++F  +  R++ SWN M+SG+  +G AE+ L +F EM+N G F  D  
Sbjct: 409 MYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDI 468

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V VLS C   G +  G                 +  +++  Y     L          
Sbjct: 469 TFVGVLSACTQAGLVDLGH---------------QYFRSMIQDYGISPKLQ--------- 504

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                  +  MI   AR   F+ A  L + M    +EPD     S+L AC   G +E G 
Sbjct: 505 ------HYGCMIDLLARAEKFEEAEILMKNM---EMEPDGAIWGSLLSACKAHGRVEFG- 554

Query: 389 DVHDYIKENDMQSSLYVSNA-----LMDMYAKCGSMADAESVFNQM 429
              +Y+ E   Q  L   NA     L ++YA  G   D   +  ++
Sbjct: 555 ---EYVAERLFQ--LEPENAGAFVLLSNIYAGAGRWDDVARIRTRL 595



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 17/278 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAM---EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  IG +  +   E+A+   EV+  S     D  T+  IL  CA L +L+ GK VH+ 
Sbjct: 331 SWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDV-TFLGILHACACLGALDLGKWVHAY 389

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I ++     +  L + L+ M+  CG ++   RVF  + +  +  WN ++  ++  G+ + 
Sbjct: 390 IDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAER 449

Query: 182 SLYLFKKMQSLGI-AADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----W 235
           +L LF +M + G+   D  TF  VL      G    V   H+ F  +     +S     +
Sbjct: 450 ALALFSEMVNKGLFRPDDITFVGVLSACTQAG---LVDLGHQYFRSMIQDYGISPKLQHY 506

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
            CMI   +A   AEK  E    M N+    D A   ++LS C   G + FG  V     +
Sbjct: 507 GCMID-LLAR--AEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQ 563

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
                  +F   L ++Y+  G  D   R+  ++ ++ +
Sbjct: 564 LEPENAGAF-VLLSNIYAGAGRWDDVARIRTRLNDKGM 600


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/591 (38%), Positives = 352/591 (59%), Gaps = 13/591 (2%)

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           E   +M  LG  V      T+L+ C +  A+  G+ VH   +K C+   +     L+ +Y
Sbjct: 76  EALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLY 135

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           +KC  L  A  +F++M +++VVSWT+MI+ Y++ G    A+ LF  M+R   EP+ +   
Sbjct: 136 NKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFA 195

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           +IL +C      E G+ +H    + + +S ++V ++L+DMYAK G + DA  VF+ +P +
Sbjct: 196 TILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER 255

Query: 433 DIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIH 481
           D+V+   +I           AL LF  + ++    + VT A +L A + LAAL  G+++H
Sbjct: 256 DVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVH 315

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
            ++LR G  +   + N+++DMY KCG +  AR +FD +P +  ISW  M+ GY  HG   
Sbjct: 316 SHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAR 375

Query: 542 DAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEGWR-FFNMMRYECNIEPKLEHYA 599
           + +  F  MR+   ++PD +++++VL  CSH  L D G   F+NM+  +  IEP + HY 
Sbjct: 376 EVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYG 435

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           C+VDLL R G + EA+ FI+ MP  P A IWGSLL  CR+H +V++   V + + ELEP+
Sbjct: 436 CVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPE 495

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           N G YV+L+N+YA A KWE+++ +R+ +  + + K PG SW+E+   V+ F A   +HP 
Sbjct: 496 NAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPR 555

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
            +++   +K L ++ K +GY P     L + DE +KE  L GHSEKLA+AFG++  P G 
Sbjct: 556 REEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGT 615

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           TIRV KNLR+C DCH  AKF+S+   R ++LRD NRFH+   G CSC  +W
Sbjct: 616 TIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 164/316 (51%), Gaps = 14/316 (4%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           DA ++FDE+  ++VVSW  MIS Y   G A + L +F EML      +  T  T+L+ C 
Sbjct: 143 DAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCY 202

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
                  GR +H+ A+K  +   +   ++LLDMY+K G +  A  VF  + ER VV+ T+
Sbjct: 203 GSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTA 262

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +I+GYA+ G+ + A++LFR +  EG+  +     S+L A +    L  GK VH ++  + 
Sbjct: 263 IISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSG 322

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFV 448
             S + + N+L+DMY+KCG++  A  +F+ MP +  +SWN M+            L+LF 
Sbjct: 323 QYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFK 382

Query: 449 AMLQ--NFEPDGVTMACILPACASLAALERGREIHGYIL--RHGISADRNVANAIVDMYV 504
            M +    +PD +T   +L  C+     + G EI   ++  + GI  D      +VD+  
Sbjct: 383 LMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLG 442

Query: 505 KCGVLVLARSLFDMIP 520
           + G +  A      +P
Sbjct: 443 RAGRVEEAFDFIKKMP 458



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 204/407 (50%), Gaps = 38/407 (9%)

Query: 73  FCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG 132
            C  G L++A+ +  +    ++  + Y +IL  C   +++ +G++VH+ + ++   +   
Sbjct: 68  LCSSGQLKEAL-LQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKT-CYLPSV 125

Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
            L ++L+ ++  C  L + R +F+++    V  W  ++  YS+ G   E+L LF +M   
Sbjct: 126 YLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRS 185

Query: 193 GIAADSYTFSCVL-KCLAVVG-------------------------------NSRRVKDA 220
               + +TF+ +L  C   +G                                S R+ DA
Sbjct: 186 DTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDA 245

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
           H +F  L +RDVV+   +ISGY   G+ E+ L++F+++   G N +  T  +VL+  +  
Sbjct: 246 HGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGL 305

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
            AL  G+ VH+  L++     +   N+L+DMYSKCG++  A R+F+ M ER+ +SW +M+
Sbjct: 306 AALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAML 365

Query: 341 AGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDV-HDYIKEND 398
            GY++ G+    + LF+ M  E  ++PD     ++L  C+   L ++G ++ ++ +   D
Sbjct: 366 VGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKD 425

Query: 399 -MQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTMIGA 443
            ++  +     ++D+  + G + +A     +MP V     W +++G+
Sbjct: 426 GIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGS 472


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/737 (33%), Positives = 388/737 (52%), Gaps = 44/737 (5%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           ++  ++  G+L   R +F+ +    V  W +L+  Y++   F E+  LF  M   G+  D
Sbjct: 79  MIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPD 138

Query: 198 SYTFSCVLKCLAVVGNSRRVKDAH--------------------------------KLFD 225
             T + +L       +   V   H                                 LF 
Sbjct: 139 HITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFK 198

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            ++++D V++N +++GY   G     + +F +M +LGF     T   VL+       + F
Sbjct: 199 HMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEF 258

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ VH+F +K  F   +   N LLD YSK   +  A ++F +M E   +S+  +I   A 
Sbjct: 259 GQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAW 318

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G  + ++ LFR +     +   +   ++L   A    LE+G+ +H      D  S + V
Sbjct: 319 NGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLV 378

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQ-NF 454
            N+L+DMYAKC    +A  +F  +  +  V W  +I            L LFV M +   
Sbjct: 379 GNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKI 438

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
             D  T A IL ACA+LA+L  G+++H  I+R G  ++    +A+VDMY KCG +  A  
Sbjct: 439 GADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQ 498

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +F  +P ++ +SW  +I+ Y  +G G  A+ +F  M  +G++P+ VSF+S+L ACSH GL
Sbjct: 499 MFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGL 558

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           V+EG ++FN M     +EP+ EHYA MVD+L R+G   EA + +  MP  PD  +W S+L
Sbjct: 559 VEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSIL 618

Query: 635 CGCRIHHEVKLAEKVAEHVFELEP-DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
             CRIH   +LA K A+ +F ++   +   YV ++N+YA A +W+ V K+++ +  RG++
Sbjct: 619 NSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIR 678

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           K P  SW+EIK K ++F A  +SHP  K+I   L  L  +M+ +GY P +  AL N DE 
Sbjct: 679 KVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEE 738

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
            K  +L  HSE++A+AF +++ P G  I V KNLR C DCH   K +SK   REI +RDS
Sbjct: 739 VKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDS 798

Query: 814 NRFHHFKDGRCSCRGFW 830
           +RFHHF DG CSC+ +W
Sbjct: 799 SRFHHFTDGSCSCKDYW 815


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/787 (33%), Positives = 419/787 (53%), Gaps = 51/787 (6%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D+ TY  ++Q      SL  GK  H  + ++       +L + L++M+  CG+    ++
Sbjct: 17  LDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLL-NNLLYMYCKCGETDVAKK 75

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           +F+++    V  WN L+  Y++ G + E + LFK+ +   +  D +TFS  L       +
Sbjct: 76  LFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLD 135

Query: 214 SR--------------------------------RVKDAHKLFDELSDRDVVSWNCMISG 241
            R                                R+  A  +F+   + D VSWN +I+G
Sbjct: 136 LRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAG 195

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN--CGALMFGRAVHAFALKACFS 299
           Y+  G  ++ L +  +ML  G N++   + + L  C +    ++  G+ +H  A+K    
Sbjct: 196 YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD 255

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR-----EGVFDGAIR 354
            ++     LLD Y+K GDL+ A ++F+ M + +VV + +MIAG+ +     +   + A+ 
Sbjct: 256 LDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMY 315

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LF  M   G++P  +  +SIL AC+     E GK +H  I + ++QS  ++ NAL+++Y+
Sbjct: 316 LFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYS 375

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVTMAC 463
             GS+ D    F+  P  D+VSW ++I          G L LF  +L    +PD  T++ 
Sbjct: 376 LSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISI 435

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           +L ACA+LAA++ G +IH Y ++ GI     + N+ + MY KCG +  A   F      D
Sbjct: 436 MLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPD 495

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           ++SW++MI+    HG   +A+  F  M+ +GI P+ ++F+ VL ACSH GLV+EG R+F 
Sbjct: 496 IVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFE 555

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
           +M+ +  I P ++H AC+VDLL R G L+EA  FI       D  +W SLL  CR+H   
Sbjct: 556 IMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKAT 615

Query: 644 KLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
              ++VAE V ELEP+    YVLL N+Y +A       ++R  +  RG+KK PG SWIE+
Sbjct: 616 DTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEV 675

Query: 704 KGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHS 763
              V+ FVAG  SHP+++ I   L+ +  E+K+  Y  +   +  +  + +    +  HS
Sbjct: 676 GNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNSMVSYHS 735

Query: 764 EKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGR 823
           EKLA+ FGI++LP    +RV KNLR C  CHE  K  S+   REI+LRD  RFH F+DG 
Sbjct: 736 EKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGS 795

Query: 824 CSCRGFW 830
           CSC  +W
Sbjct: 796 CSCGDYW 802



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 240/527 (45%), Gaps = 55/527 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  + ++G   + M +   +  S  ++D  T+ + L +C     L  G+ +H++I
Sbjct: 87  SWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALI 146

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG+     +L + L+ M+  CG +   R VF   D      WN L+  Y + G+  E 
Sbjct: 147 TVSGLG-GPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEM 205

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA--------------------------VVGNSR- 215
           L L  KM   G+  +SY     LK                             VVG +  
Sbjct: 206 LRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALL 265

Query: 216 -------RVKDAHKLFDELSDRDVVSWNCMISGYI-----ANGVAEKGLEVFKEMLNLGF 263
                   ++DA K+F  + D +VV +N MI+G++     A+  A + + +F EM + G 
Sbjct: 266 DTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGM 325

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
                T  ++L  C+   A   G+ +HA   K     +    N L+++YS  G ++  ++
Sbjct: 326 KPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLK 385

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
            F    +  VVSWTS+I G+ + G F+G + LF  ++  G +PD + I+ +L ACA    
Sbjct: 386 CFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAA 445

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           ++ G+ +H Y  +  + +   + N+ + MYAKCG +  A   F +    DIVSW+ MI  
Sbjct: 446 VKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISS 505

Query: 443 ---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISA 491
                    A+DLF  M      P+ +T   +L AC+    +E G      + + HGI+ 
Sbjct: 506 NAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITP 565

Query: 492 DRNVANAIVDMYVKCGVLVLARS-LFDMIPAKDLISWTIMIAGYGMH 537
           +   +  IVD+  + G L  A S + D     D + W  +++   +H
Sbjct: 566 NVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVH 612



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 196/394 (49%), Gaps = 20/394 (5%)

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
           LG  +D  T   ++      G+L+ G+  H   +K CF   +   N LL MY KCG+ D 
Sbjct: 13  LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A ++F++M +R+VVSW S+I+GY + G +   + LF+      +  D +  ++ L  C  
Sbjct: 73  AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              L +G+ +H  I  + +   + ++N+L+DMY KCG +  A  VF      D VSWN++
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192

Query: 441 IGA----------LDLFVAMLQN-FEPDGVTMACILPACAS--LAALERGREIHGYILRH 487
           I            L L V ML++    +   +   L AC S   +++E G+ +HG  ++ 
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 252

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM-----HGFGCD 542
           G+  D  V  A++D Y K G L  A  +F ++P  +++ +  MIAG+         F  +
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANE 312

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
           A+  F +M+  G++P E +F S+L ACS     + G +    + ++ N++        +V
Sbjct: 313 AMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQI-FKYNLQSDEFIGNALV 371

Query: 603 DLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           +L S +G++ +  +     P   D   W SL+ G
Sbjct: 372 ELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIVG 404



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 16/268 (5%)

Query: 77  GNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGS 136
           G L    E+L+S  K   D  T   +L  CA+L +++ G+++H+   ++GI  +  ++ +
Sbjct: 413 GGLTLFHELLFSGRKP--DEFTISIMLSACANLAAVKSGEQIHAYAIKTGIG-NFTIIQN 469

Query: 137 KLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA 196
             + M+  CGD+      F +  N  +  W++++   ++ G  KE++ LF+ M+  GIA 
Sbjct: 470 SQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAP 529

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN--GVAEKGLEV 254
           +  TF   L  L    +   V++  + F+ +     ++ N   S  I +  G A +  E 
Sbjct: 530 NHITF---LGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEA 586

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL-DMYS 313
              +++ GF  D     ++LS C    A   G+ V    ++     E + +  LL ++Y+
Sbjct: 587 ESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIE--LEPEAAASYVLLYNIYN 644

Query: 314 KCGDLDGAIRVFEKMGERSV-----VSW 336
             G    A  +   M +R V     +SW
Sbjct: 645 DAGIQMPATEIRNLMKDRGVKKEPGLSW 672


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/708 (35%), Positives = 391/708 (55%), Gaps = 45/708 (6%)

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL---------------KCLAV- 210
           N ++  Y   G +   L  F  M    +  D  TF  VL                C+A+ 
Sbjct: 291 NKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALK 350

Query: 211 --------VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                   V NS        R++  A  +F+ +S+RD++SWN +I+G   + +  + + +
Sbjct: 351 LGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCL 410

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCG-ALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           F ++L  G   D  TM +VL   ++    L   + +H  A+K     +   +  L+D YS
Sbjct: 411 FMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYS 470

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
           +   +  A  +F +     +V+W +M++GY +       + LF  M ++G   D + + +
Sbjct: 471 RNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLAT 529

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD 433
           +L  C     +  GK VH Y  ++     L+VS+ ++DMY KCG M+ A+  F+ +PV D
Sbjct: 530 VLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 589

Query: 434 IVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHG 482
            V+W T+I           AL +F  M L    PD  T+A +  A + L ALE+GR+IH 
Sbjct: 590 DVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 649

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
             L+   ++D  V  ++VDMY KCG +  A  LF  I   ++ +W  M+ G   HG G +
Sbjct: 650 NALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 709

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
           A+  F  M   GI+PD+V+FI VL ACSHSGLV E +++   M  +  I+P++EHY+C+ 
Sbjct: 710 ALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLA 769

Query: 603 DLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTG 662
           D L R G + EA   I+ M +   A+++ +LL  CR+  + +  ++VA  + ELEP ++ 
Sbjct: 770 DALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 829

Query: 663 YYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKK 722
            YVLL+N+YA A KW+E+K  R  +    +KK+PG SWIE+K K+++FV    S+P  + 
Sbjct: 830 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTEL 889

Query: 723 IESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIR 782
           I   +K +  ++K+EGY P+T + L++ +E EKE AL  HSEKLA+AFG+L+ P    IR
Sbjct: 890 IYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIR 949

Query: 783 VTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           V KNLRVCGDCH   K++SK   REIVLRD+NRFH FKDG CSC  +W
Sbjct: 950 VIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 185/630 (29%), Positives = 322/630 (51%), Gaps = 36/630 (5%)

Query: 84  EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFV 143
           +V+Y+S        T   +L+LC     +   +  H   C+ G+  DD V G+ LV +++
Sbjct: 146 DVVYTSRM------TLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGA-LVNIYL 198

Query: 144 TCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
             G +KEGR +F ++    V +WNL++  Y + G  +E++ L     + G+  +  T   
Sbjct: 199 KFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRL 258

Query: 204 VLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
           + +       + +VK      D  +  +++S N ++SGY+  G     L+ F +M+    
Sbjct: 259 LSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDL 318

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             D  T + VL+      +L  G+ VH  ALK      ++ +N+L++MY K   +  A  
Sbjct: 319 ECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLART 378

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC--D 381
           VF  M ER ++SW S+IAG A+  +   A+ LF  ++R G++PD Y +TS+L A +   +
Sbjct: 379 VFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPE 438

Query: 382 GLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
           G L + K +H + IK N++  S +VS AL+D Y++   M +AE +F +    D+V+WN M
Sbjct: 439 G-LSLSKQIHVHAIKTNNVADS-FVSTALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNAM 495

Query: 441 IG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGI 489
           +            L+LF  M +  E  D  T+A +L  C  L A+ +G+++H Y ++ G 
Sbjct: 496 MSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGY 555

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             D  V++ I+DMYVKCG +  A+  FD IP  D ++WT +I+G   +G    A+  F+ 
Sbjct: 556 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQ 615

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRT 608
           MR  G+ PDE +  ++  A S    +++G +   N ++  C  +P +     +VD+ ++ 
Sbjct: 616 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVG--TSLVDMYAKC 673

Query: 609 GNLSEAY---RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDNTGY 663
           G++ +AY   + IEMM +    T W ++L G   H E K A ++ + +  L  +PD   +
Sbjct: 674 GSIDDAYCLFKRIEMMNI----TAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTF 729

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLK 693
             +L+         E  K +R      G+K
Sbjct: 730 IGVLSACSHSGLVSEAYKYIRSMHRDYGIK 759



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 145/574 (25%), Positives = 247/574 (43%), Gaps = 96/574 (16%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG-----NFKESLYLFKK 188
           L + L+ M+  CG L   RRVF+K+    +  WN ++  Y+++      N KE+  LF+ 
Sbjct: 83  LVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRI 142

Query: 189 MQSLGIAADSYTFSCVLK-CL----------------------------AVVG---NSRR 216
           ++   +     T S +LK CL                            A+V       +
Sbjct: 143 LRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGK 202

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           VK+   LF+E+  RDVV WN M+  Y+  G  E+              +DL++       
Sbjct: 203 VKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA-------------IDLSS------- 242

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS---- 332
                         AF        EI+    LL   S      G ++ FE   + S    
Sbjct: 243 --------------AFHTSGLHPNEITLR--LLSRISGDDSEAGQVKSFENGNDASAVSE 286

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           ++S   +++GY   G +   ++ F  MV   +E D      +L        L +G+ VH 
Sbjct: 287 IISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHC 346

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
              +  +   L VSN+L++MY K   +  A +VFN M  +D++SWN++I           
Sbjct: 347 MALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVE 406

Query: 443 ALDLFVAMLQ-NFEPDGVTMACILPACASLA-ALERGREIHGYILRHGISADRNVANAIV 500
           A+ LF+ +L+   +PD  TM  +L A +SL   L   ++IH + ++    AD  V+ A++
Sbjct: 407 AVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALI 466

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           D Y +   +  A  LF      DL++W  M++GY     G   +  F  M + G   D+ 
Sbjct: 467 DAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDF 525

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +  +VL  C     +++G +  +    +   +  L   + ++D+  + G++S A    + 
Sbjct: 526 TLATVLKTCGFLFAINQG-KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 584

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
           +PV PD   W +L+ GC  + E    E+ A HVF
Sbjct: 585 IPV-PDDVAWTTLISGCIENGE----EERALHVF 613



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 138/295 (46%), Gaps = 38/295 (12%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           LM G+  HA  L    + E    N L+ MYSKCG L  A RVF+KM ER +VSW S++A 
Sbjct: 62  LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121

Query: 343 YAR--EGVFDG---AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           YA+  EGV +    A  LFR + ++ +      ++ +L  C   G +   +  H Y  + 
Sbjct: 122 YAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKI 181

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPD 457
            +    +V+ AL+++Y K G + +   +F +MP +D+V WN M+ A   ++ M   F+ +
Sbjct: 182 GLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKA---YLEM--GFKEE 236

Query: 458 GVTMACIL------PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
            + ++         P   +L  L R            IS D + A  +            
Sbjct: 237 AIDLSSAFHTSGLHPNEITLRLLSR------------ISGDDSEAGQVKSF--------- 275

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             +  D     ++IS   +++GY   G     +  F DM ++ +E D+V+FI VL
Sbjct: 276 -ENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVL 329



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           S + L  G+  H  IL    + +R + N ++ MY KCG L  AR +FD +P +DL+SW  
Sbjct: 58  STSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNS 117

Query: 530 MIAGYGMHGFGC-----DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           ++A Y     G      +A   F  +RQ  +    ++   +L  C HSG V     F   
Sbjct: 118 ILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHG- 176

Query: 585 MRYECNIEPKLEHY--ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
             Y C I    + +    +V++  + G + E     E MP   D  +W  +L
Sbjct: 177 --YACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLML 225


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/768 (32%), Positives = 420/768 (54%), Gaps = 51/768 (6%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           ++  C  LK    G+++   + +SG+     V  S L+ M  + G++     +F+++   
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS-LISMLGSMGNVDYANYIFDQMSER 207

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------ 215
               WN +   Y++ G+ +ES  +F  M+      +S T S +L  L  V + +      
Sbjct: 208 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 267

Query: 216 --------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                     R  +A+ +F ++  +D++SWN +++ ++ +G + 
Sbjct: 268 GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSL 327

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
             L +   M++ G +V+  T  + L+ C        GR +H   + +         N L+
Sbjct: 328 DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALV 387

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
            MY K G++  + RV  +M  R VV+W ++I GYA +   D A+  F+ M  EG+  +  
Sbjct: 388 SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 447

Query: 370 AITSILHACACDG-LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
            + S+L AC   G LLE GK +H YI     +S  +V N+L+ MYAKCG ++ ++ +FN 
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 507

Query: 429 MPVKDIVSWNTMIGA---------LDLFVAMLQNF--EPDGVTMACILPACASLAALERG 477
           +  ++I++WN M+ A         +   V+ +++F    D  + +  L A A LA LE G
Sbjct: 508 LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG 567

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA---KDLISWTIMIAGY 534
           +++HG  ++ G   D  + NA  DMY KCG +     +  M+P    + L SW I+I+  
Sbjct: 568 QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI---GEVVKMLPPSVNRSLPSWNILISAL 624

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
           G HG+  +  ATF++M + GI+P  V+F+S+L ACSH GLVD+G  +++M+  +  +EP 
Sbjct: 625 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPA 684

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
           +EH  C++DLL R+G L+EA  FI  MP+ P+  +W SLL  C+IH  +    K AE++ 
Sbjct: 685 IEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLS 744

Query: 655 ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG 714
           +LEP++   YVL +N++A   +WE+V+ +R+++  + +KK   CSW+++K KV+ F  G 
Sbjct: 745 KLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD 804

Query: 715 SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
            +HP   +I + L+ ++  +K  GY   T  AL + DE +KE  L  HSE+LA+A+ +++
Sbjct: 805 RTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMS 864

Query: 775 LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
            P G T+R+ KNLR+C DCH + KF+S+   R IVLRD  RFHHF+ G
Sbjct: 865 TPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 230/493 (46%), Gaps = 44/493 (8%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR--------- 216
           WN +M    + G + E +  F+KM  LGI   S+  + ++      G+  R         
Sbjct: 9   WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68

Query: 217 ------------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL 252
                                   V  + K+F+E+ DR+VVSW  ++ GY   G  E+ +
Sbjct: 69  AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           +++K M   G   +  +M  V+S C        GR +    +K+    +++  N+L+ M 
Sbjct: 129 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 188

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
              G++D A  +F++M ER  +SW S+ A YA+ G  + + R+F  M R   E +   ++
Sbjct: 189 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 248

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           ++L         + G+ +H  + +    S + V N L+ MYA  G   +A  VF QMP K
Sbjct: 249 TLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 308

Query: 433 DIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIH 481
           D++SWN+++           AL L  +M+ + +  + VT    L AC +    E+GR +H
Sbjct: 309 DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILH 368

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
           G ++  G+  ++ + NA+V MY K G +  +R +   +P +D+++W  +I GY       
Sbjct: 369 GLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPD 428

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
            A+A F  MR  G+  + ++ +SVL AC   G + E  +  +        E        +
Sbjct: 429 KALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSL 488

Query: 602 VDLLSRTGNLSEA 614
           + + ++ G+LS +
Sbjct: 489 ITMYAKCGDLSSS 501



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 213/419 (50%), Gaps = 14/419 (3%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF-GRA 288
           R+ VSWN M+SG +  G+  +G+E F++M +LG       + ++++ C   G++   G  
Sbjct: 4   RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VH F  K+    ++  +  +L +Y   G +  + +VFE+M +R+VVSWTS++ GY+ +G 
Sbjct: 64  VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
            +  I +++GM  EG+  +  +++ ++ +C       +G+ +   + ++ ++S L V N+
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS 183

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL---------FVAMLQNF--EPD 457
           L+ M    G++  A  +F+QM  +D +SWN++  A              ++++ F  E +
Sbjct: 184 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 243

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
             T++ +L     +   + GR IHG +++ G  +   V N ++ MY   G  V A  +F 
Sbjct: 244 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 303

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            +P KDLISW  ++A +   G   DA+     M  +G   + V+F S L AC      ++
Sbjct: 304 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 363

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           G     ++        ++   A +V +  + G +SE+ R +  MP   D   W +L+ G
Sbjct: 364 GRILHGLVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 420



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 127/527 (24%), Positives = 241/527 (45%), Gaps = 55/527 (10%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T ++N+    + + G++E++  +  L      ++++ T  ++L +   +   + G+ +H 
Sbjct: 209 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 268

Query: 121 IICESGIVIDDGVLG--SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
           ++ + G    D V+   + L+ M+   G   E   VF ++    +  WN LM  +   G 
Sbjct: 269 LVVKMGF---DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 325

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVL-KCLA-----------------------VVGNS 214
             ++L L   M S G + +  TF+  L  C                         ++GN+
Sbjct: 326 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 385

Query: 215 --------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                     + ++ ++  ++  RDVV+WN +I GY  +   +K L  F+ M   G + +
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 445

Query: 267 LATMVTVLSGCANCGALM-FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
             T+V+VLS C   G L+  G+ +HA+ + A F  +    N+L+ MY+KCGDL  +  +F
Sbjct: 446 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 505

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
             +  R++++W +M+A  A  G  +  ++L   M   G+  D ++ +  L A A   +LE
Sbjct: 506 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 565

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD 445
            G+ +H    +   +   ++ NA  DMY+KCG + +   +      + + SWN +I AL 
Sbjct: 566 EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 625

Query: 446 ----------LFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADR 493
                      F  ML+   +P  VT   +L AC+    +++G   +  I R  G+    
Sbjct: 626 RHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAI 685

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAK--DLISWTIMIAGYGMHG 538
                ++D+  + G L  A +    +P K  DL+ W  ++A   +HG
Sbjct: 686 EHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV-WRSLLASCKIHG 731



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 205/451 (45%), Gaps = 60/451 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ +  F   G    A+ +L S  S    ++  T+ S L  C      E G+ +H ++
Sbjct: 312 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 371

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG+  +  ++G+ LV M+   G++ E RRV  ++    V  WN L+  Y++  +  ++
Sbjct: 372 VVSGLFYNQ-IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 430

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-------------------SRRVKD---- 219
           L  F+ M+  G++++  T   VL    + G+                      VK+    
Sbjct: 431 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 490

Query: 220 ----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                     +  LF+ L +R++++WN M++    +G  E+ L++  +M + G ++D  +
Sbjct: 491 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 550

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
               LS  A    L  G+ +H  A+K  F  +    N   DMYSKCG++   +++     
Sbjct: 551 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV 610

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            RS+ SW  +I+   R G F+     F  M+  GI+P      S+L AC+  GL++ G  
Sbjct: 611 NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLA 670

Query: 390 VHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFV 448
            +D I ++  ++ ++     ++D+  + G +A+AE+  ++MP+K                
Sbjct: 671 YYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK---------------- 714

Query: 449 AMLQNFEPDGVTMACILPACASLAALERGRE 479
                  P+ +    +L +C     L+RGR+
Sbjct: 715 -------PNDLVWRSLLASCKIHGNLDRGRK 738



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 154/324 (47%), Gaps = 22/324 (6%)

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG-LLEI 386
           M  R+ VSW +M++G  R G++   +  FR M   GI+P  + I S++ AC   G +   
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----- 441
           G  VH ++ ++ + S +YVS A++ +Y   G ++ +  VF +MP +++VSW +++     
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 442 -GALDLFVAMLQNFEPDGV-----TMACILPACASLAALERGREIHGYILRHGISADRNV 495
            G  +  + + +    +GV     +M+ ++ +C  L     GR+I G +++ G+ +   V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            N+++ M    G +  A  +FD +  +D ISW  + A Y  +G   ++   F+ MR+   
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR----TGNL 611
           E +  +  ++L    H      G     ++     ++   +   C+ + L R     G  
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLV-----VKMGFDSVVCVCNTLLRMYAGAGRS 295

Query: 612 SEAYRFIEMMPVAPDATIWGSLLC 635
            EA    + MP   D   W SL+ 
Sbjct: 296 VEANLVFKQMP-TKDLISWNSLMA 318


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 266/762 (34%), Positives = 413/762 (54%), Gaps = 47/762 (6%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI-WNLLMHEY 173
           G +VH++   +G+   D  + + LV M+   G + E RRVF++    +  + WN +M  +
Sbjct: 119 GVQVHAVAVSTGLS-GDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAF 177

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL------------------------- 208
            K     +++ LF +M   G+  + + FSCV+                            
Sbjct: 178 VKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDV 237

Query: 209 ----AVVGNSRRVKDAHK---LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
               A+V    ++ D H    +F ++   DVVSWN  ISG + +G  +  LE+  +M + 
Sbjct: 238 FTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSS 297

Query: 262 GFNVDLATMVTVLSGCANCGALMFG--RAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
           G   ++ T+ ++L  CA  GA  F   R +H F +KAC   +      L+DMY+K G LD
Sbjct: 298 GLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLD 357

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A +VFE +  + ++ W ++I+G +  G    ++ LF  M +EG + +   + ++L + A
Sbjct: 358 DARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTA 417

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               +     VH   ++    S  +V N L+D Y KC  +  A  VF +    +I+++ +
Sbjct: 418 SLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTS 477

Query: 440 MIGALD----------LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           MI AL           LF+ ML+   EPD   ++ +L ACASL+A E+G+++H ++++  
Sbjct: 478 MITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRK 537

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
              D    NA+V  Y KCG +  A   F  +P K ++SW+ MI G   HG G  A+  F 
Sbjct: 538 FMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFR 597

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            M    I P+ ++  SVL AC+H+GLVDE   +F+ M+    I+   EHY+CM+DLL R 
Sbjct: 598 RMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRA 657

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           G L +A   +  MP   +A +WG+LL   R+H + +L +  AE +F LEP+ +G +VLLA
Sbjct: 658 GKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLA 717

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           N YA A  W+EV K+R+ +    +KK P  SW+E+K +V+ F+ G  SHP A+ I + L+
Sbjct: 718 NTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLE 777

Query: 729 RLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLR 788
            L   M + GY P     L + D+ EKE+ L  HSE+LA+AF +++ PAG  IRV KNLR
Sbjct: 778 ELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLR 837

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +C DCH   KF+SK   REI++RD NRFHHF DG CSC  +W
Sbjct: 838 ICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 252/520 (48%), Gaps = 46/520 (8%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L   A  +SL  G  +H+ + +SG++       + L+  +  C      RRVF++  + 
Sbjct: 10  LLTRYAATQSLFLGAHIHAHLLKSGLL---HAFRNHLLSFYSKCRLPGSARRVFDETPDP 66

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-------------- 207
               W+ L+  YS     +E+L  F+ M++ G+  + +    VLKC              
Sbjct: 67  CHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGLGVQVHAVA 126

Query: 208 ---------------LAVVGNSRRVKDAHKLFDELS-DRDVVSWNCMISGYIANGVAEKG 251
                          +A+ G    V +A ++FDE + DR+ VSWN M+S ++ N      
Sbjct: 127 VSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDA 186

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           +E+F EM+  G   +      V++ C     L  GR VHA  ++  + K++   N L+DM
Sbjct: 187 VELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDM 246

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           YSK GD+  A  VF K+ +  VVSW + I+G    G    A+ L   M   G+ P+V+ +
Sbjct: 247 YSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTL 306

Query: 372 TSILH--ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           +SIL   A A  G   +G+ +H ++ +    S  Y+  AL+DMYAK G + DA  VF  +
Sbjct: 307 SSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWI 366

Query: 430 PVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGR 478
           P KD++ WN +I           +L LF  M  +  + +  T+A +L + ASL A+    
Sbjct: 367 PRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTT 426

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           ++H    + G  +D +V N ++D Y KC  L  A  +F+   + ++I++T MI       
Sbjct: 427 QVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCD 486

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
            G DAI  F +M + G+EPD     S+L AC+     ++G
Sbjct: 487 HGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 526



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 234/489 (47%), Gaps = 54/489 (11%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           +  ++  C   + LE G+KVH+++  +G    D    + LV M+   GD+     VF K+
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVVRTGY-DKDVFTANALVDMYSKLGDIHMAALVFGKV 263

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----------- 207
               V  WN  +      G+ + +L L  +M+S G+  + +T S +LK            
Sbjct: 264 PKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFAL 323

Query: 208 --------------------LAVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGYIA 244
                               +A+V    +   + DA K+F+ +  +D++ WN +ISG   
Sbjct: 324 GRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSH 383

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G   + L +F  M   G +++  T+  VL   A+  A+     VHA A K  F  +   
Sbjct: 384 GGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHV 443

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            N L+D Y KC  L  A +VFE+    +++++TSMI   ++    + AI+LF  M+R+G+
Sbjct: 444 VNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGL 503

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           EPD + ++S+L+ACA     E GK VH ++ +    + ++  NAL+  YAKCGS+ DA+ 
Sbjct: 504 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADL 563

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAA 473
            F+ +P K +VSW+ MIG          ALD+F  M+ +   P+ +T+  +L AC     
Sbjct: 564 AFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGL 623

Query: 474 LERGREIHGYILR----HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWT 528
           ++   E  GY        GI       + ++D+  + G L  A  L + +P + +   W 
Sbjct: 624 VD---EAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWG 680

Query: 529 IMIAGYGMH 537
            ++A   +H
Sbjct: 681 ALLAASRVH 689



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 154/572 (26%), Positives = 262/572 (45%), Gaps = 65/572 (11%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           L+     R    A ++FDE  D   VSW+ +++ Y  N +  + L  F+ M   G   + 
Sbjct: 44  LSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNE 103

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
             +  VL    + G    G  VHA A+    S +I   N L+ MY   G +D A RVF++
Sbjct: 104 FALPIVLKCAPDAG---LGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDE 160

Query: 328 MG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
              +R+ VSW  M++ + +      A+ LF  MV  G+ P+ +  + +++AC     LE 
Sbjct: 161 AARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEA 220

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
           G+ VH  +        ++ +NAL+DMY+K G +  A  VF ++P  D+VSWN  I     
Sbjct: 221 GRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVL 280

Query: 443 ------ALDLFVAMLQN-FEPDGVTMACILP--ACASLAALERGREIHGYILRHGISADR 493
                 AL+L + M  +   P+  T++ IL   A A   A   GR+IHG++++    +D 
Sbjct: 281 HGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDD 340

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            +  A+VDMY K G+L  AR +F+ IP KDL+ W  +I+G    G   ++++ F  MR+ 
Sbjct: 341 YIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKE 400

Query: 554 GIEPDEVSFISVLYAC------------------------SH--SGLVDEGWRFFNMMRY 587
           G + +  +  +VL +                         SH  +GL+D  W+  N +RY
Sbjct: 401 GSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWK-CNCLRY 459

Query: 588 -----ECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEMMP--VAPDATIWGSLLCGCRI 639
                E +    +  +  M+  LS+  +  +A + F+EM+   + PD  +  SLL  C  
Sbjct: 460 ANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACAS 519

Query: 640 HHEVKLAEKVAEHVFELEPDNTGYY-VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
               +  ++V  H+ + +     +    L   YA+    E+       ++  GL      
Sbjct: 520 LSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDA-----DLAFSGLPDKGVV 574

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL 730
           SW       +  + G + H H K+   + +R+
Sbjct: 575 SW-------SAMIGGLAQHGHGKRALDVFRRM 599



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 187/383 (48%), Gaps = 21/383 (5%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           ++  +L+  A   +L  G  +HA  LK+      +F N LL  YSKC     A RVF++ 
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDET 63

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            +   VSW+S++  Y+   +   A+  FR M   G+  + +A+  +L  CA D  L  G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVL-KCAPDAGL--GV 120

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIG----- 442
            VH       +   ++V+NAL+ MY   G + +A  VF++    ++ VSWN M+      
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180

Query: 443 -----ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                A++LF  M+     P+    +C++ AC     LE GR++H  ++R G   D   A
Sbjct: 181 DRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTA 240

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           NA+VDMY K G + +A  +F  +P  D++SW   I+G  +HG    A+     M+ +G+ 
Sbjct: 241 NALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300

Query: 557 PDEVSFISVL--YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           P+  +  S+L   A + +G    G +    M   C         A +VD+ ++ G L +A
Sbjct: 301 PNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVA-LVDMYAKYGLLDDA 359

Query: 615 YRFIEMMPVAPDATIWGSLLCGC 637
            +  E +P   D  +W +L+ GC
Sbjct: 360 RKVFEWIP-RKDLLLWNALISGC 381



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 198/419 (47%), Gaps = 43/419 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDG--KKVHS 120
           ++NA I      G+ + A+E+L   + S +  +  T  SIL+ CA   +      +++H 
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHG 329

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            + ++    DD  +G  LV M+   G L + R+VF  I    + +WN L+   S  G   
Sbjct: 330 FMIKACADSDD-YIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHG 388

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSRRV----------KDAH------ 221
           ESL LF +M+  G   +  T + VLK    L  + ++ +V           D+H      
Sbjct: 389 ESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLI 448

Query: 222 -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                        K+F+E S  +++++  MI+        E  +++F EML  G   D  
Sbjct: 449 DSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPF 508

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            + ++L+ CA+  A   G+ VHA  +K  F  ++   N L+  Y+KCG ++ A   F  +
Sbjct: 509 VLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGL 568

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            ++ VVSW++MI G A+ G    A+ +FR MV E I P+   +TS+L AC   GL++  K
Sbjct: 569 PDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAK 628

Query: 389 DVHDYIKEN---DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
                +KE    D     Y  + ++D+  + G + DA  + N MP + +   W  ++ A
Sbjct: 629 GYFSSMKEMFGIDRTEEHY--SCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAA 685


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/577 (40%), Positives = 347/577 (60%), Gaps = 14/577 (2%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           +D    ++ L  C N   +   + VHA         ++   N LL M +K  DL  A  +
Sbjct: 1   MDPDFFISTLFKCRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLL 57

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F KM ER  VSW+ MI G+ + G ++   + FR ++R G +PD +++  ++ AC     L
Sbjct: 58  FNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGL 117

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL 444
            +G+ +H  + +N +    +V + L+DMYAKCG + +A+ +F++MP KD+V+   MI   
Sbjct: 118 IMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGY 177

Query: 445 D----------LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                      LF  M ++ F PD V M  I+ ACA L A+ + R +H Y+     S D 
Sbjct: 178 AECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDV 237

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            +  A++DMY KCG +  +R +FD +  K++ISW+ MI  YG HG G +A+  F+ M  +
Sbjct: 238 ELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNS 297

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           GI P+ ++FIS+LYACSH+GLVD+G + F++M     + P ++HY CMVDLL R G L +
Sbjct: 298 GIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQ 357

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A R IE M V  D  IW + L  CRIH +V LAEK A+ +  L+  N G+Y+LL+N+YA 
Sbjct: 358 ALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYAN 417

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
           A +W++V K+R  +++R LKK PG +WIE+   +  F AG +SH  + +I  +LK L  +
Sbjct: 418 AGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQK 477

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           ++  GY P T   L + DE  K   L  HSEKLA+AFG++  P G  IR+TKNLRVCGDC
Sbjct: 478 LESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDC 537

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H   K +S   +R+I++RD+NRFHHFK+G CSC  +W
Sbjct: 538 HSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 188/345 (54%), Gaps = 13/345 (3%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K L +    + +  AH LF+++ +RD VSW+ MI G++ NG  E+  + F+E++  G   
Sbjct: 40  KLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKP 99

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  ++  V+  C +   L+ GR +H+  LK     +    +TL+DMY+KCG +D A ++F
Sbjct: 100 DNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLF 159

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++M ++ +V+ T MIAGYA  G  + +  LF  M R+G  PD  A+ +I++ACA  G + 
Sbjct: 160 DRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMN 219

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
             + VHDY+        + +  A++DMYAKCGS+  +  +F++M  K+++SW+ MIG   
Sbjct: 220 KARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYG 279

Query: 443 -------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADR 493
                  AL+LF  ML +   P+ +T   +L AC+    ++ G ++   + + +G+  D 
Sbjct: 280 YHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDV 339

Query: 494 NVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWTIMIAGYGMH 537
                +VD+  + G L  A R + +M   KD   W   +    +H
Sbjct: 340 KHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIH 384



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 184/384 (47%), Gaps = 38/384 (9%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D   + S L  C ++  +   K+VH+ +  +GI I D ++ +KL++M     DL     
Sbjct: 1   MDPDFFISTLFKCRNIFQI---KQVHAQVTTTGI-IHDLIVANKLLYMCAKHKDLVTAHL 56

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------- 206
           +FNK++      W++++  + K G+++     F+++   G   D+++   V+K       
Sbjct: 57  LFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMG 116

Query: 207 ----------------------CLAVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISG 241
                                 C  +V    +   + +A +LFD +  +D+V+   MI+G
Sbjct: 117 LIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAG 176

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y   G   +   +F +M   GF  D   MVT+++ CA  GA+   R VH +     +S +
Sbjct: 177 YAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD 236

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +     ++DMY+KCG +D +  +F++M +++V+SW++MI  Y   G    A+ LF  M+ 
Sbjct: 237 VELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLN 296

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMA 420
            GI P+     S+L+AC+  GL++ G  +   +  +  ++  +     ++D+  + G + 
Sbjct: 297 SGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLD 356

Query: 421 DAESVFNQMPV-KDIVSWNTMIGA 443
            A  +   M V KD   W   +GA
Sbjct: 357 QALRLIENMEVEKDEGIWCAFLGA 380



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 134/299 (44%), Gaps = 36/299 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +++  IG F + G+ E+  +         SK D  +   +++ C D   L  G+ +HS +
Sbjct: 68  SWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTV 127

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G+ +D+ V  S LV M+  CG +   +++F+++    +    +++  Y++ G   ES
Sbjct: 128 LKNGLHLDNFVC-STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNES 186

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH--------------------- 221
             LF +M+  G   D      ++   A +G   + +  H                     
Sbjct: 187 WVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDM 246

Query: 222 -----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                      ++FD +  ++V+SW+ MI  Y  +G   + LE+F  MLN G   +  T 
Sbjct: 247 YAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITF 306

Query: 271 VTVLSGCANCGALMFGRAVHAF-ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           +++L  C++ G +  G  + +  ++      ++     ++D+  + G LD A+R+ E M
Sbjct: 307 ISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENM 365


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/591 (38%), Positives = 353/591 (59%), Gaps = 13/591 (2%)

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           E   +M  LG  V      ++L+ C +  A+  G+ VH   +K C+   +     L+ +Y
Sbjct: 48  EALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLY 107

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           +KC  L  A  +F++M +R+VVSWT+MI+ Y++ G    A+ LF  M+R   EP+ +   
Sbjct: 108 NKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFA 167

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           +IL +C      E G+ +H    + + +S ++V ++L+DMYAK G + DA  VF+ +P +
Sbjct: 168 TILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER 227

Query: 433 DIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIH 481
           D+V+   +I           AL LF  + ++    + VT A +L A + LAAL  G+++H
Sbjct: 228 DVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVH 287

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
            ++LR G  +   + N+++DMY KCG +  AR +FD +P +  ISW  M+ GY  HG   
Sbjct: 288 SHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAR 347

Query: 542 DAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEGWR-FFNMMRYECNIEPKLEHYA 599
           + +  F  MR+   ++PD +++++VL  CSH  L D G   F+NM+  +  IEP + HY 
Sbjct: 348 EVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYG 407

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           C+VDLL R G + EA+ FI+ MP  P A IWGSLL  CR+H +V++   V + + ELEP+
Sbjct: 408 CVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPE 467

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           N G YV+L+N+YA A KWE+++ +R+ +  + + K PG SW+E+   V+ F A   +HP 
Sbjct: 468 NAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPR 527

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
            +++ + +K L ++ K +GY P     L + DE +KE  L GHSEKLA+AFG++  P G 
Sbjct: 528 REEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGT 587

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           TIRV KNLR+C DCH  AKF+S+   R ++LRD NRFH+   G CSC  +W
Sbjct: 588 TIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 163/316 (51%), Gaps = 14/316 (4%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           DA  +FDE+  R+VVSW  MIS Y   G A + L +F EML      +  T  T+L+ C 
Sbjct: 115 DARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCY 174

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
                  GR +H+ A+K  +   +   ++LLDMY+K G +  A  VF  + ER VV+ T+
Sbjct: 175 GSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTA 234

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +I+GYA+ G+ + A++LFR +  EG+  +     S+L A +    L  GK VH ++  + 
Sbjct: 235 IISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSG 294

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFV 448
             S + + N+L+DMY+KCG++  A  +F+ MP +  +SWN M+            L+LF 
Sbjct: 295 QYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFK 354

Query: 449 AMLQ--NFEPDGVTMACILPACASLAALERGREIHGYIL--RHGISADRNVANAIVDMYV 504
            M +    +PD +T   +L  C+     + G EI   ++  + GI  D      +VD+  
Sbjct: 355 LMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLG 414

Query: 505 KCGVLVLARSLFDMIP 520
           + G +  A      +P
Sbjct: 415 RAGRVEEAFDFIKKMP 430



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 204/407 (50%), Gaps = 38/407 (9%)

Query: 73  FCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG 132
            C  G L++A+ +  +    ++  + Y SIL  C   +++ +G++VH+ + ++   +   
Sbjct: 40  LCSSGQLKEAL-LQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKT-CYLPSV 97

Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
            L ++L+ ++  C  L + R +F+++    V  W  ++  YS+ G   E+L LF +M   
Sbjct: 98  YLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRS 157

Query: 193 GIAADSYTFSCVL-KCLAVVG-------------------------------NSRRVKDA 220
               + +TF+ +L  C   +G                                S R+ DA
Sbjct: 158 DTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDA 217

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
           H +F  L +RDVV+   +ISGY   G+ E+ L++F+++   G N +  T  +VL+  +  
Sbjct: 218 HGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGL 277

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
            AL  G+ VH+  L++     +   N+L+DMYSKCG++  A R+F+ M ER+ +SW +M+
Sbjct: 278 AALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAML 337

Query: 341 AGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDV-HDYIKEND 398
            GY++ G+    + LF+ M  E  ++PD     ++L  C+   L ++G ++ ++ +   D
Sbjct: 338 VGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKD 397

Query: 399 -MQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTMIGA 443
            ++  +     ++D+  + G + +A     +MP V     W +++G+
Sbjct: 398 GIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGS 444


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/714 (35%), Positives = 390/714 (54%), Gaps = 56/714 (7%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
            F+ N L+  Y+K+G    +  +F +M    +    +T + +L  LA   +SR V D  +
Sbjct: 48  TFLLNHLLTAYAKSGRLARARRVFDEMPDPNL----FTRNALLSALA---HSRLVPDMER 100

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN----LGFNVDLATMVTVLSGCA 278
           LF  + +RD VS+N +I+G+ + G   + +++++ +L         + L+ M+ V S  +
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV---- 334
           +      G +VH   L+  F       + L+DMY+K G +  A RVF++M  ++VV    
Sbjct: 161 DRA---LGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNT 217

Query: 335 ---------------------------SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
                                      +WT+M+ G  + G+   A+ +FR M  EG+  D
Sbjct: 218 LITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGID 277

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
            Y   SIL AC     LE GK +H YI     + +++V +AL+DMY+KC S+  AE+VF 
Sbjct: 278 QYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFR 337

Query: 428 QMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALER 476
           +M  ++I+SW  MI           A+  F  M +   +PD  T+  ++ +CA+LA+LE 
Sbjct: 338 RMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEE 397

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           G + H   L  G+     V+NA+V +Y KCG +  A  LFD +   D +SWT ++ GY  
Sbjct: 398 GAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQ 457

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
            G   + I  F  M   G++PD V+FI VL ACS +GLV++G  +F+ M+ +  I P  +
Sbjct: 458 FGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDD 517

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HY CM+DL SR+G   EA  FI+ MP +PDA  W +LL  CR+   +++ +  AE++ E 
Sbjct: 518 HYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLET 577

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           +P N   YVLL +++A   +W EV  LR  +  R +KK PGCSWI+ K KV+IF A   S
Sbjct: 578 DPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQS 637

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP + +I   L+ L  +M  EGY P     L +  + +K   +  HSEKLA+AFG++ +P
Sbjct: 638 HPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVP 697

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               IR+ KNLRVC DCH   KF+SK   R+I++RD+ RFH F DG CSC  FW
Sbjct: 698 QEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 234/490 (47%), Gaps = 55/490 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           +YNA I  F   G+  +++++   L   E  +    T  +++ + + L     G  VH  
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +   G       +GS LV M+   G +++ RRVF +++   V ++N L+     TG    
Sbjct: 172 VLRLGFGAY-AFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI-----TG---- 221

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
                                 +L+C       + ++DA  LF  + DRD ++W  M++G
Sbjct: 222 ----------------------LLRC-------KMIEDAKGLFQLMVDRDSITWTTMVTG 252

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
              NG+  + L+VF+ M   G  +D  T  ++L+ C    AL  G+ +HA+  +  +   
Sbjct: 253 LTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDN 312

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +   + L+DMYSKC  +  A  VF +M  R+++SWT+MI GY +    + A+R F  M  
Sbjct: 313 VFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQM 372

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           +GI+PD + + S++ +CA    LE G   H     + +   + VSNAL+ +Y KCGS+ D
Sbjct: 373 DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIED 432

Query: 422 AESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACAS 470
           A  +F++M   D VSW  ++            +DLF  ML N  +PDGVT   +L AC+ 
Sbjct: 433 AHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSR 492

Query: 471 LAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWT 528
              +E+G +    + + HGI    +    ++D+Y + G    A      +P + D   W 
Sbjct: 493 AGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWA 552

Query: 529 IMIAGYGMHG 538
            +++   + G
Sbjct: 553 TLLSSCRLRG 562



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 149/345 (43%), Gaps = 66/345 (19%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           +E   ID  T+ SIL  C  L +LE+GK++H+ I  +    D+  +GS LV M+  C  +
Sbjct: 271 AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYE-DNVFVGSALVDMYSKCRSI 329

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-- 206
           +    VF ++    +  W  ++  Y +    +E++  F +MQ  GI  D +T   V+   
Sbjct: 330 RLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSC 389

Query: 207 -------------CLAVVGNSRR-----------------VKDAHKLFDELSDRDVVSWN 236
                        CLA+V    R                 ++DAH+LFDE+S  D VSW 
Sbjct: 390 ANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 449

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            +++GY   G A++ +++F++ML  G   D  T + VLS C+  G             K 
Sbjct: 450 ALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAG----------LVEKG 499

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
           C            D +       G + + +         +T MI  Y+R G F  A    
Sbjct: 500 C------------DYFDSMQKDHGIVPIDDH--------YTCMIDLYSRSGRFKEAEEFI 539

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           + M      PD +   ++L +C   G +EIGK   + + E D Q+
Sbjct: 540 KQMPH---SPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQN 581



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 15/253 (5%)

Query: 43  HSSCTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTY 99
           +S C    ++ ++ + + C+   ++ A I  + +    E+A+      +   I  D  T 
Sbjct: 323 YSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
            S++  CA+L SLE+G + H +   SG++    V  + LV ++  CG +++  R+F+++ 
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITV-SNALVTLYGKCGSIEDAHRLFDEMS 441

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
                 W  L+  Y++ G  KE++ LF+KM + G+  D  TF  VL   +  G    V+ 
Sbjct: 442 FHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAG---LVEK 498

Query: 220 AHKLFDELS-DRDVVS----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
               FD +  D  +V     + CMI  Y  +G  ++  E  K+M +   + D     T+L
Sbjct: 499 GCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPH---SPDAFGWATLL 555

Query: 275 SGCANCGALMFGR 287
           S C   G +  G+
Sbjct: 556 SSCRLRGNMEIGK 568


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/568 (41%), Positives = 344/568 (60%), Gaps = 13/568 (2%)

Query: 275 SGCANCGALMFGRAVHA-FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           S   +C  L   R VHA  A    F + ++  N LL MY + G L+ A  +F+ M +R  
Sbjct: 58  SSLLSCRNLFQVRQVHAQIATNGAF-RNLAVANKLLYMYVERGALEDAQELFDGMSKRHP 116

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
            SW+ ++ GYA+ G F     +FR ++R G   D Y+   ++ AC     L+ G+ +H  
Sbjct: 117 YSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCI 176

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD-------- 445
             +  +    +V   L+DMYA+C  + DA  +F +M  +D+ +W  MIGAL         
Sbjct: 177 TLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVES 236

Query: 446 -LFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
            +F   ++N    PD V +  ++ ACA L A+ + + IH YI   G S D  +  A++DM
Sbjct: 237 LVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDM 296

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG +  AR +FD +  +++I+W+ MIA YG HG G  A+  F  M ++GI P+ ++F
Sbjct: 297 YAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITF 356

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           +S+LYACSH+GL++EG RFF+ M  E  + P ++HY CMVDLL R G L EA   IE MP
Sbjct: 357 VSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMP 416

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           V  D  +WG+LL  CRIH  + LAE+VA  + +L+    G+YVLL+N+YA A KWE++ K
Sbjct: 417 VEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAK 476

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
            R+ +++ GL+K PG +WIE+  K+  F  G  +HP + +I  +LKRL  +++  GY P 
Sbjct: 477 TRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPD 536

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           T   L + DE  K+  L  HSEKLA+AFG+L LP G  IR+TKNLRVCGDCH   KF+S 
Sbjct: 537 TNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSL 596

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
             ++ I++RD+ RFHHFK+G CSCR +W
Sbjct: 597 IEQKTIIVRDAKRFHHFKEGVCSCRDYW 624



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 193/383 (50%), Gaps = 38/383 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           DTK + S L  C +L  +   ++VH+ I  +G   +  V  +KL++M+V  G L++ + +
Sbjct: 52  DTKRFRSSLLSCRNLFQV---RQVHAQIATNGAFRNLAV-ANKLLYMYVERGALEDAQEL 107

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-------- 206
           F+ +     + W++++  Y+K GNF    ++F+++   G   D Y+   V++        
Sbjct: 108 FDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDL 167

Query: 207 ---------------------CLAVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGY 242
                                C  +V    R   V+DAH++F ++  RD+ +W  MI   
Sbjct: 168 KCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGAL 227

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             +GV  + L  F  M N G   D   +VTV+  CA  GA+   +A+HA+     +S ++
Sbjct: 228 AESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDV 287

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
                ++DMY+KCG ++ A  +F++M  R+V++W++MIA Y   G  + A+ LF  M+R 
Sbjct: 288 ILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRS 347

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMAD 421
           GI P+     S+L+AC+  GL+E G+     +  E  +   +     ++D+  + G + +
Sbjct: 348 GILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDE 407

Query: 422 AESVFNQMPV-KDIVSWNTMIGA 443
           A  +   MPV KD V W  ++GA
Sbjct: 408 ALEMIEGMPVEKDEVLWGALLGA 430



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 171/334 (51%), Gaps = 13/334 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++DA +LFD +S R   SW+ ++ GY   G       +F+E+L  G  +D  +   V+  
Sbjct: 101 LEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRA 160

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C +   L  GR +H   LK           TL+DMY++C  ++ A ++F KM +R + +W
Sbjct: 161 CRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATW 220

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T MI   A  GV   ++  F  M  +GI PD  A+ ++++ACA  G +   K +H YI  
Sbjct: 221 TVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYING 280

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
                 + +  A++DMYAKCGS+  A  +F++M V+++++W+ MI           AL+L
Sbjct: 281 TGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALEL 340

Query: 447 FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYV 504
           F  ML++   P+ +T   +L AC+    +E G+     +   +G++ D      +VD+  
Sbjct: 341 FPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLG 400

Query: 505 KCGVLVLARSLFDMIPA-KDLISWTIMIAGYGMH 537
           + G L  A  + + +P  KD + W  ++    +H
Sbjct: 401 RAGRLDEALEMIEGMPVEKDEVLWGALLGACRIH 434



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 160/354 (45%), Gaps = 42/354 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           +++  +G + +VGN         E+L S   + +D  +   +++ C DLK L+ G+ +H 
Sbjct: 118 SWSVIVGGYAKVGNFFSCFWMFRELLRSG--APLDDYSAPVVIRACRDLKDLKCGRLIHC 175

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           I  + G+     V  + LV M+  C  +++  ++F K+    +  W +++   +++G   
Sbjct: 176 ITLKCGLDYGHFVCAT-LVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPV 234

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK------------------ 222
           ESL  F +M++ GI  D      V+   A +G   + K  H                   
Sbjct: 235 ESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMI 294

Query: 223 --------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                         +FD +  R+V++W+ MI+ Y  +G  EK LE+F  ML  G   +  
Sbjct: 295 DMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRI 354

Query: 269 TMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T V++L  C++ G +  G R   +   +   + ++     ++D+  + G LD A+ + E 
Sbjct: 355 TFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEG 414

Query: 328 MG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACA 379
           M  E+  V W +++         D A R+ R +++ +  +P  Y + S ++A A
Sbjct: 415 MPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANA 468


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 271/828 (32%), Positives = 409/828 (49%), Gaps = 104/828 (12%)

Query: 101  SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
            +IL+ C+ +     GK VH  +     V  D  +G+ L+  +  CGDL   R VF+ +  
Sbjct: 188  TILKACSAMLLXRIGKMVHGFVIRKS-VESDVFVGNALIHFYSNCGDLGSSRSVFHSMQE 246

Query: 161  GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
              V  W  L+  Y + G   E+ ++F  MQ  G+  D  ++S +L   A  G    +  A
Sbjct: 247  RDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNG---EIDLA 303

Query: 221  HKLFDELSDR----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
             +  +E+ +R     V SWN +ISG + NG  E  L++F  ML    + ++ T+ ++L  
Sbjct: 304  LETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPA 363

Query: 277  CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
            C    AL  G+A+H  A K      +    +++DMYSKCG  D A +VF K   ++   W
Sbjct: 364  CTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMW 423

Query: 337  TSMIA-----------------------------------GYAREGVFDGAIRLFRGMVR 361
              MIA                                   G+AR G+   A  L   MV+
Sbjct: 424  NEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQ 483

Query: 362  EGIEPDVYA-----------------------------------------------ITSI 374
             G++P+V +                                               IT  
Sbjct: 484  MGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGA 543

Query: 375  LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
            L ACA   L   GK++H Y   N  + +++VS+AL+DMYAKC  M  A  VF ++  ++ 
Sbjct: 544  LPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNT 603

Query: 435  VSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGY 483
            VSWN ++           AL LF+ ML +  +P  +T   + PAC  +AA+  GR +HGY
Sbjct: 604  VSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGY 663

Query: 484  ILRHGISADRN-VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
              +  +   +N + +A++DMY KCG ++ A+S+FD    KD+  W  MI+ + +HG   +
Sbjct: 664  AAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARN 723

Query: 543  AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
            A A F  M   GI PD ++F+S+L AC+  GLV+EGW++FN M     +   LEHY CMV
Sbjct: 724  AFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMV 783

Query: 603  DLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTG 662
             +L   G L EA  FI  MP  PDA +W +LL  CR+H   ++ E+ A+ +FELEPDN  
Sbjct: 784  GILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNAT 843

Query: 663  YYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKK 722
             Y+LL+N+Y  +  W+  K LR  +  R L     CS++ +      F  G SSHP  ++
Sbjct: 844  NYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHXCTFKGGESSHPELEE 903

Query: 723  IESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIR 782
            I      L  +M+  GYFP     + + +E E +   C H+EKLA+ FGI++    + + 
Sbjct: 904  ILETWDXLARKMELSGYFPLD--PVFDDEEKELDPFSCLHTEKLAICFGIISSNXYRPVH 961

Query: 783  VTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            V+KN+R+C DCH  AK +SK   REI ++D   +HH KDG C C+  W
Sbjct: 962  VSKNIRMCIDCHTSAKLISKIDGREIFVKDVCFYHHMKDGICXCQDRW 1009



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 200/416 (48%), Gaps = 23/416 (5%)

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           N   ++DA KL DE+ +R V ++  +I  Y  +   ++    F+ M+  G   D   + T
Sbjct: 129 NQWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPT 188

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  C+       G+ VH F ++     ++   N L+  YS CGDL  +  VF  M ER 
Sbjct: 189 ILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERD 248

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           VVSWT++I+ Y  EG+ D A  +F  M  +G++PD+ + +++L   A +G +++  +  +
Sbjct: 249 VVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLE 308

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQ 452
            + E  +Q ++   N ++    + G + D                     ALD+F  ML 
Sbjct: 309 EMPERGLQPTVNSWNGIISGCVQNGYLED---------------------ALDMFSRMLW 347

Query: 453 NFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
             E P+ +T+A ILPAC  L AL  G+ IH    +HGI  +  V  +++DMY KCG    
Sbjct: 348 YPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDY 407

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A  +F     K+   W  MIA Y   G   DA+     M++ G +PD +++ ++L   + 
Sbjct: 408 AEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHAR 467

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           +GL  +     + M  +  ++P +  +  ++    ++G   EA +   +M    D 
Sbjct: 468 NGLKTQAXELLSEM-VQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDG 522



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 145/677 (21%), Positives = 281/677 (41%), Gaps = 136/677 (20%)

Query: 10  TNFLFFSPPNQSYGKKFASYKPSTLPIIVSSKSHSSCT--INPISASISKTLVCKTKNYN 67
           T FL  SP N+++     S    + P I+  K +S+ +  I+P      +TL        
Sbjct: 22  TCFLHLSPHNRNFFPLPKSKFRVSTPRIIGFKHYSTVSNHIHP------QTL-------- 67

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
                      L   ++ L +S  ++I      S+L  C+   +L + +++H+ + +   
Sbjct: 68  -----------LPSFVDTLTNSSPTEISDSI--SLLNRCS---TLSEFRQIHARVVKLNA 111

Query: 128 VIDDGVLGSKLVFMFV-TCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
           +     +G+KLV ++      L++ R++ ++I N  V  +  L+  Y ++  + E    F
Sbjct: 112 LKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXF 171

Query: 187 KKMQSLGIAADSYTFSCVLK-CLAV-----------------------VGNSR------- 215
           + M   G+  D Y    +LK C A+                       VGN+        
Sbjct: 172 RLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNC 231

Query: 216 -RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             +  +  +F  + +RDVVSW  +IS Y+  G+ ++   +F  M   G   DL +   +L
Sbjct: 232 GDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALL 291

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER--- 331
           SG                                   +++ G++D A+   E+M ER   
Sbjct: 292 SG-----------------------------------FARNGEIDLALETLEEMPERGLQ 316

Query: 332 -SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
            +V SW  +I+G  + G  + A+ +F  M+    +P++  I SIL AC     L +GK +
Sbjct: 317 PTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAI 376

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H    ++ +  ++YV  +++DMY+KCGS   AE VF +   K+   WN MI         
Sbjct: 377 HXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKV 436

Query: 443 --ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL L  +M ++ ++PD +T   IL   A      +  E+   +++ G+  +    N +
Sbjct: 437 EDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVL 496

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           +  + + G+   A  +F ++ +                  GC+     N++    + P+ 
Sbjct: 497 ISGFQQSGLSYEALKVFRIMQSP---------------SDGCNP----NEVLNLSMRPNP 537

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           ++    L AC+   L  +G +  +        EP +   + +VD+ ++  ++  A +   
Sbjct: 538 ITITGALPACADLNLWCQG-KEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFF 596

Query: 620 MMPVAPDATIWGSLLCG 636
            +    +   W +L+ G
Sbjct: 597 RID-GRNTVSWNALMAG 612


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/691 (35%), Positives = 400/691 (57%), Gaps = 44/691 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T   +++ CA L ++  G+ VH     +G+   D  +GS L+ M+   G L++ R  
Sbjct: 140 DAHTLPYVVKSCAALGAVSLGRLVHRTARATGLA-SDVYVGSALIKMYSDAGLLRDARDA 198

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL--------- 205
           F+ +      +WN++M  Y K G+   ++ LF+ M+  G   +  T +C L         
Sbjct: 199 FDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADL 258

Query: 206 -----------KC------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                      KC            L++    R + DA +LF+ L   D+V+WN MISG 
Sbjct: 259 LSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGC 318

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           + NG+ ++ L +F +ML  G   D  T+V++L    +   L  G+ VH + ++ C   + 
Sbjct: 319 VQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDA 378

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              + L+D+Y KC D+  A  +++      VV  +++I+GY   G+ + A+++FR ++ +
Sbjct: 379 FLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQ 438

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
            I+P+   + S+L ACA    L +G+++H Y+  N  +   YV +ALMDMYAKCG +  +
Sbjct: 439 CIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLS 498

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
             +F++M +KD V+WN+MI           ALDLF  M ++  + + VT++  L ACASL
Sbjct: 499 HYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASL 558

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            A+  G+EIHG I++  I AD    +A++DMY KCG + LA  +F+ +P K+ +SW  +I
Sbjct: 559 PAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSII 618

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           + YG HG   ++++  + M++ G +PD V+F++++ AC+H+GLV+EG + F  M  E  I
Sbjct: 619 SAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLI 678

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P++EH+ACMVDL SR+G L +A +FI  MP  PDA IWG+LL  CR+H  V+LA+  ++
Sbjct: 679 APRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQ 738

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            +F+L+P N+GYYVL++N+ A A +W+ V K+R  +    + K PG SW+++    ++FV
Sbjct: 739 ELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFV 798

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           A   SHP ++ I + LK L  E++ EGY P+
Sbjct: 799 ASDKSHPESEDIYTSLKALLQELREEGYVPR 829



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 162/328 (49%), Gaps = 19/328 (5%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKA---CFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
           ++ +L GC +   L  G  +HA A+ +        ++ +  LL MY        A+ VF 
Sbjct: 35  LLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 327 KMGER---SVVSWTSMIAGYAREGVFDGAIRLFRGMVRE--GIEPDVYAITSILHACACD 381
            +      S + W  +I G+   G    A+  +  M        PD + +  ++ +CA  
Sbjct: 95  ALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAAL 154

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
           G + +G+ VH   +   + S +YV +AL+ MY+  G + DA   F+ MP +D V WN M+
Sbjct: 155 GAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMM 214

Query: 442 ----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                     GA+ LF  M +   EP+  T+AC L  CA+ A L  G ++H   ++ G+ 
Sbjct: 215 DGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLE 274

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
            +  VAN ++ MY KC  L  A  LF+++P  DL++W  MI+G   +G   +A+  F DM
Sbjct: 275 QEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDM 334

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEG 578
            ++G  PD V+ +S+L A +    + +G
Sbjct: 335 LRSGARPDSVTLVSLLPALTDLNGLKQG 362



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 21/286 (7%)

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSS---LYVSNALMDMYAKCGSMADAESVFN 427
           + ++L  C     L +G  +H     +   S+   L +   L+ MY       DA +VF+
Sbjct: 35  LLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 428 QMP---VKDIVSWNTMIG----------ALDLFVAMLQNF---EPDGVTMACILPACASL 471
            +P       + WN +I           A+  +V M  +     PD  T+  ++ +CA+L
Sbjct: 95  ALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAAL 154

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            A+  GR +H      G+++D  V +A++ MY   G+L  AR  FD +P +D + W +M+
Sbjct: 155 GAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMM 214

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
            GY   G    A+  F +MR +G EP+  +    L  C+    +  G +  ++   +C +
Sbjct: 215 DGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLA-VKCGL 273

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           E ++     ++ + ++   L +A+R  E++P   D   W  ++ GC
Sbjct: 274 EQEVAVANTLLSMYAKCRCLDDAWRLFELLP-RDDLVTWNGMISGC 318



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 56/297 (18%)

Query: 77  GNLEKAMEVL-YSSEKS-KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G  EKA+++  Y  E+  K +  T  S+L  CA + +L  G+++H      G V+ +   
Sbjct: 423 GMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIH------GYVLRNAYE 476

Query: 135 G-----SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
           G     S L+ M+  CG L     +F+K+       WN ++  +S+ G  +E+L LF++M
Sbjct: 477 GKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQM 536

Query: 190 QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH---------------------------- 221
              GI  ++ T S  L   A +      K+ H                            
Sbjct: 537 CMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNM 596

Query: 222 ----KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
               ++F+ + D++ VSWN +IS Y A+G+ ++ +     M   G+  D  T + ++S C
Sbjct: 597 ELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISAC 656

Query: 278 ANCGALMFGRAVHAFALKACFSKE------ISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           A+ G +  G       L  C +KE      +     ++D+YS+ G LD AI+    M
Sbjct: 657 AHAGLVEEG-----LQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADM 708



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 14/220 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N+ I  F + G  ++A+++      E  K +  T  S L  CA L ++  GK++H +I
Sbjct: 512 TWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVI 571

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G +  D    S L+ M+  CG+++   RVF  + +     WN ++  Y   G  KES
Sbjct: 572 IK-GPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKES 630

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNC 237
           +    +MQ  G   D  TF  ++   A  G    V++  +LF  ++   +++     + C
Sbjct: 631 VSFLHRMQEEGYKPDHVTFLALISACAHAG---LVEEGLQLFQCMTKEYLIAPRMEHFAC 687

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           M+  Y  +G  +K ++   +M    F  D      +L  C
Sbjct: 688 MVDLYSRSGRLDKAIQFIADM---PFKPDAGIWGALLHAC 724


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/687 (37%), Positives = 389/687 (56%), Gaps = 46/687 (6%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           SILQ C D   L  G++ H+ +  +GI  + G+LG+KL+ M+V CG   + + +F ++  
Sbjct: 51  SILQTCTDPSGLSQGRQAHAQMLVNGIGYN-GILGTKLLGMYVLCGAFLDAKNIFYQLRL 109

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------------- 207
                WN ++  ++  G F  +L  + KM   G   D YTF  V+K              
Sbjct: 110 WCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVV 169

Query: 208 ----------LAVVGNSRRVK---------DAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                     L V   S  +K         DA  LFD +  +D V WN M++GY+ NG  
Sbjct: 170 HDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDW 229

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT- 307
           +    VF EM     N +  T   VLS CA+   + FG  +H   + +    +    NT 
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTF 289

Query: 308 -LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L+D+Y KC D++ A ++F++     +V  T+MI+GY   G+ + A+ +FR +++E +  
Sbjct: 290 ALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRA 349

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           +   + S+L ACA    L +GK++H +I +N    S YV +A+MDMYAKCG +  A   F
Sbjct: 350 NSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTF 409

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALE 475
             +  KD V WN+MI           A+DLF  M +   + D V+++  L ACA+L AL 
Sbjct: 410 IGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALH 469

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
            G+EIH +++R    +D    +A++DMY KCG L LA  +FD +  K+ +SW  +IA YG
Sbjct: 470 YGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYG 529

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
            HG   D++  F+ M   GI+PD V+F++++ AC H+G VDEG  +F  M  E  I  ++
Sbjct: 530 NHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARM 589

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           EHYACMVDL  R G L+EA+  I  MP +PDA +WG+LL  CR+H  V+LAE  + ++F+
Sbjct: 590 EHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFD 649

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           L+P N+GYYVLL+NV+A A +WE V K+R  +  RG++K PGCSWI++    ++FVA   
Sbjct: 650 LDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADR 709

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPK 742
           SHP + +I  LLK L LE+++EGY P+
Sbjct: 710 SHPQSSQIYLLLKNLFLELRKEGYVPQ 736



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 239/493 (48%), Gaps = 52/493 (10%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  +++ C  L S+  G+ VH  I   G  +D  V GS L+  +   G + + R +
Sbjct: 146 DKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFV-GSSLIKFYSENGCIHDARYL 204

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----- 209
           F+++ +    +WN++++ Y K G++  +  +F +M+      +S TF+CVL   A     
Sbjct: 205 FDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMI 264

Query: 210 -------------------VVGNS----------RRVKDAHKLFDELSDRDVVSWNCMIS 240
                               V N+          R V+ A K+FD+ +  D+V    MIS
Sbjct: 265 NFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMIS 324

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY+ NG+    LE+F+ +L      +  T+ +VL  CA   AL  G+ +H   LK     
Sbjct: 325 GYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGG 384

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                + ++DMY+KCG LD A + F  + ++  V W SMI   ++ G  + AI LFR M 
Sbjct: 385 SCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMG 444

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
             G + D  +I++ L ACA    L  GK++H ++     +S L+  +AL+DMY+KCG++ 
Sbjct: 445 MAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLD 504

Query: 421 DAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACA 469
            A  VF+ M  K+ VSWN++I A          L+LF  ML +  +PD VT   I+ AC 
Sbjct: 505 LACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACG 564

Query: 470 SLAALERGREIHGY---ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLI 525
               ++ G  IH +       GI A       +VD++ + G L  A  + + +P + D  
Sbjct: 565 HAGQVDEG--IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAG 622

Query: 526 SWTIMIAGYGMHG 538
            W  ++    +HG
Sbjct: 623 VWGTLLGACRLHG 635



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 208/420 (49%), Gaps = 41/420 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  +  + + G+ + A  V     +++ +    T+  +L +CA    +  G ++H ++ 
Sbjct: 216 WNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVV 275

Query: 124 ESGIVIDDGVLGS-KLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            SG+ +D  V  +  L+ ++  C D++  R++F++     + +   ++  Y   G    +
Sbjct: 276 SSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNA 335

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS---- 214
           L +F+ +    + A+S T + VL   A                         VG++    
Sbjct: 336 LEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDM 395

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R+  AH+ F  +SD+D V WN MI+    NG  E+ +++F++M   G   D  ++
Sbjct: 396 YAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSI 455

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
              LS CAN  AL +G+ +HAF ++  F  ++   + L+DMYSKCG+LD A RVF+ M E
Sbjct: 456 SAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEE 515

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           ++ VSW S+IA Y   G    ++ LF GM+ +GI+PD     +I+ AC   G  ++ + +
Sbjct: 516 KNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAG--QVDEGI 573

Query: 391 HDY---IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
           H +    +E  + + +     ++D++ + G + +A  + N MP   D   W T++GA  L
Sbjct: 574 HYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRL 633



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 183/387 (47%), Gaps = 27/387 (6%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V++L  C +   L  GR  HA  L             LL MY  CG    A  +F ++ 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
                 W  MI G+   G FD A+  +  M+  G  PD Y    ++ AC     + +G+ 
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-------- 441
           VHD I+    +  ++V ++L+  Y++ G + DA  +F++MP KD V WN M+        
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 442 --GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN- 497
              A  +F+ M +    P+ VT AC+L  CAS   +  G ++HG ++  G+  D  VAN 
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 498 -AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
            A++D+Y KC  + +AR +FD     D++  T MI+GY ++G   +A+  F  + Q  + 
Sbjct: 289 FALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 348

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFF-----NMMRYECNIEPKLEHYACMVDLLSRTGNL 611
            + V+  SVL AC+    +  G         N     C +       + ++D+ ++ G L
Sbjct: 349 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVG------SAIMDMYAKCGRL 402

Query: 612 SEAYR-FIEMMPVAPDATIWGSLLCGC 637
             A++ FI +     DA  W S++  C
Sbjct: 403 DLAHQTFIGISD--KDAVCWNSMITSC 427



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 87/398 (21%), Positives = 159/398 (39%), Gaps = 72/398 (18%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
            E+ + ++ T  S+L  CA L +L  GK++H  I ++G       +GS ++ M+  CG L
Sbjct: 344 QERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHG-GSCYVGSAIMDMYAKCGRL 402

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
               + F  I +     WN ++   S+ G  +E++ LF++M   G   D  + S  L   
Sbjct: 403 DLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC 462

Query: 209 AVVGNSRRVKDAH--------------------------------KLFDELSDRDVVSWN 236
           A +      K+ H                                ++FD + +++ VSWN
Sbjct: 463 ANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWN 522

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            +I+ Y  +G  +  L +F  ML  G   D  T + ++S C + G +     +H F    
Sbjct: 523 SIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQV--DEGIHYF---R 577

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
           C ++E+                     +  +M       +  M+  + R G  + A  + 
Sbjct: 578 CMTEELG--------------------IMARMEH-----YACMVDLFGRAGRLNEAFGMI 612

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M      PD     ++L AC   G +E+ +     + + D Q+S Y    L +++A  
Sbjct: 613 NSMP---FSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYV-LLSNVHANA 668

Query: 417 G---SMADAESVFNQMPVKDI--VSWNTMIGALDLFVA 449
           G   S+    S+  +  V+ +   SW  +     +FVA
Sbjct: 669 GQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVA 706



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 15/275 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ I    + G  E+A+++        +K D  +  + L  CA+L +L  GK++H+ + 
Sbjct: 420 WNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMM 479

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             G    D    S L+ M+  CG+L    RVF+ ++      WN ++  Y   G  K+SL
Sbjct: 480 R-GAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSL 538

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSWNCM 238
            LF  M   GI  D  TF   L  ++  G++ +V +    F  +++       +  + CM
Sbjct: 539 NLFHGMLGDGIQPDHVTF---LAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACM 595

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           +  +   G A +  E F  + ++ F+ D     T+L  C   G +     V +  L    
Sbjct: 596 VDLF---GRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAE-VASRNLFDLD 651

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
            +   +   L ++++  G  +  +++   M ER V
Sbjct: 652 PQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGV 686


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/765 (33%), Positives = 405/765 (52%), Gaps = 83/765 (10%)

Query: 146  GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
            G +   R VF+++ +     W+ ++  Y + G ++E++ LF +M  LG+  + +  + ++
Sbjct: 322  GHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLI 381

Query: 206  KC---------------------------------LAVVGNSRRVKDAHKLFDELSDRDV 232
                                               +   G+   V +A KLF+E+ D +V
Sbjct: 382  TACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNV 441

Query: 233  VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
            VSW  ++ GY  +G   + L V++ M   G + +  T  TV S C      + G  V   
Sbjct: 442  VSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGH 501

Query: 293  ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
             ++  F   +S  N+L+ M+S    ++ A  VF+ M E  ++SW +MI+ YA  G+   +
Sbjct: 502  IIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRES 561

Query: 353  IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
            +R F  M     E +   ++S+L  C+    L+ G+ +H  + +  + S++ + N L+ +
Sbjct: 562  LRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTL 621

Query: 413  YAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMA 462
            Y++ G   DAE VF  M  +D++SWN+M+            L +   +LQ  +PD VT  
Sbjct: 622  YSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWN 681

Query: 463  CI----------------------------------LPACASLAALERGREIHGYILRHG 488
             +                                  L A A+LA LE G+++HG +++ G
Sbjct: 682  ALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIKLG 741

Query: 489  ISADRNVANAIVDMYVKCGVLVLARSLFDMIPA---KDLISWTIMIAGYGMHGFGCDAIA 545
              +D +V NA +DMY KCG +     +  M+P    +  +SW I+I+ +  HG    A  
Sbjct: 742  FESDLHVTNAAMDMYGKCGEM---HDVLKMLPQPINRSRLSWNILISAFARHGCFQKARE 798

Query: 546  TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLL 605
            TF++M + G +PD V+F+S+L AC+H GLVDEG  +++ M  E  + P +EH  C++DLL
Sbjct: 799  TFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLL 858

Query: 606  SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV 665
             R+G LS A  FI+ MPV P+   W SLL  CRIH  ++LA K AEH+ EL+P +   YV
Sbjct: 859  GRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYV 918

Query: 666  LLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIES 725
            L +NV A + KWE+V+ LR+++    +KK P CSW+++K KV+ F  G   HP A +I +
Sbjct: 919  LYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISA 978

Query: 726  LLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTK 785
             L  L    K  GY P T +AL + DE +KE  L  HSE+LA+AFG++N P   T+R+ K
Sbjct: 979  KLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFK 1038

Query: 786  NLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            NLRVCGDCH + KF+S    R+IVLRD  RFHHF  G+CSC  +W
Sbjct: 1039 NLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 187/722 (25%), Positives = 327/722 (45%), Gaps = 107/722 (14%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           ++I   C +G L +A+++L SS  +++D   Y  ILQLC D K+ + G  +H+ +  +G 
Sbjct: 3   SKIQSACNLGRLAEALKLL-SSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGF 61

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              D  L +KL+  +V  GD+   R VF+ +    V  W  ++  YS+ G F+++  LF 
Sbjct: 62  G-SDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFS 120

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
            M+  G+ A+        KC        +++DA  LF  + +RDVVSWN MI GY   G 
Sbjct: 121 DMRHCGVKANHALVDFHSKC-------GKMEDASYLFGTMMERDVVSWNAMIGGYAVQGF 173

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF--------------- 292
           A+    +F+ ML  G   D  T+ +VL   A  G L+    +H                 
Sbjct: 174 ADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGL 233

Query: 293 ------------------------------ALKACFSKE--ISFNNTLLDMYSKCGDLDG 320
                                         AL   ++ E   +  N L+DMY+K G+++ 
Sbjct: 234 LINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIED 293

Query: 321 AIRVFEKMGERSVVSWTSMIAGYA---------------------------------REG 347
           A R F++M E++V+SWTS+I+GYA                                 R G
Sbjct: 294 AKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVG 353

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL-EIGKDVHDYIKENDMQSSLYVS 406
           +++ A+ LF  M   G+EP+ + + S++ AC+  G + + G  VH ++ +  +   +YV 
Sbjct: 354 LYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVG 413

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNT-MIGALDL-----FVAMLQNFEPDGV- 459
            AL+  Y   G + +A+ +F +MP  ++VSW + M+G  D       + + Q    +GV 
Sbjct: 414 TALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVS 473

Query: 460 ----TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
               T A +  +C  L     G ++ G+I+++G     +VAN+++ M+     +  A  +
Sbjct: 474 GNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYV 533

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           FD +   D+ISW  MI+ Y  HG   +++  F+ MR    E +  +  S+L  CS    +
Sbjct: 534 FDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNL 593

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
             G R  + +  +  ++  +     ++ L S  G   +A    + M    D   W S++ 
Sbjct: 594 KWG-RGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAM-TERDLISWNSMMA 651

Query: 636 GCRIHHEVKL-AEKVAEHVFEL-EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
            C +     L   K+   + ++ +PD   +  L+   +AE E+  E  K  + I  +G+ 
Sbjct: 652 -CYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGG-HAENEEPNEAVKAYKLIREKGIP 709

Query: 694 KN 695
            N
Sbjct: 710 AN 711


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/818 (32%), Positives = 416/818 (50%), Gaps = 128/818 (15%)

Query: 99  YCSILQLCADLK--SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           Y + L+LC  L+  SL+  + VH  I   G      +L ++L+ ++    +L   R++F+
Sbjct: 15  YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHIL-NRLIDVYCKSSELNYARQLFD 73

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           +I          ++  Y  +G+   +  +F+K                  C+        
Sbjct: 74  EISEPDKIARTTMVSGYCASGDITLARGVFEKAPV---------------CM-------- 110

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
                        RD V +N MI+G+  N      + +F +M + GF  D  T  +VL+G
Sbjct: 111 -------------RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAG 157

Query: 277 CANCG-----ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD----LDGAIRVFEK 327
            A         + F    HA ALK+      S +N L+ +YSKC      L  A +VF++
Sbjct: 158 LALVADDEKQCVQF----HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDE 213

Query: 328 MGERSVVSWTSMIAGYAREGVFD--------------------------------GAIRL 355
           + E+   SWT+M+ GY + G FD                                 A+ +
Sbjct: 214 ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEM 273

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
            R MV  GIE D +   S++ ACA  GLL++GK VH Y+   +   S +  N+L+ +Y K
Sbjct: 274 VRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYK 332

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGA-------------------------------- 443
           CG   +A ++F +MP KD+VSWN ++                                  
Sbjct: 333 CGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGL 392

Query: 444 ---------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                    L LF  M  + FEP     +  + +CA L A   G++ H  +L+ G  +  
Sbjct: 393 AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSL 452

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
           +  NA++ MY KCGV+  AR +F  +P  D +SW  +IA  G HG G +A+  + +M + 
Sbjct: 453 SAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKK 512

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           GI PD ++ ++VL ACSH+GLVD+G ++F+ M     I P  +HYA ++DLL R+G  S+
Sbjct: 513 GIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSD 572

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A   IE +P  P A IW +LL GCR+H  ++L    A+ +F L P++ G Y+LL+N++A 
Sbjct: 573 AESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAA 632

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
             +WEEV ++R+ +  RG+KK   CSWIE++ +V+ F+   +SHP A+ +   L+ L  E
Sbjct: 633 TGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKE 692

Query: 734 MKREGYFPKTRYALINAD-EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
           M+R GY P T + L + + +  KE  L  HSEK+A+AFG++ LP G TIR+ KNLR CGD
Sbjct: 693 MRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGD 752

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CH   +F+S   +R+I+LRD  RFHHF++G CSC  FW
Sbjct: 753 CHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 288/854 (33%), Positives = 454/854 (53%), Gaps = 61/854 (7%)

Query: 36   IIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKID 95
            +++S  SH S +I+       +  +  + ++N+ I  +C  G+   A ++  S ++   +
Sbjct: 182  VLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATE 241

Query: 96   TK------TYCSILQLCADLKS--LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
                    T+CS++ +   L    L   +++ + I +S  V  D  +GS LV  F   G 
Sbjct: 242  LNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFV-KDLYVGSALVSGFARYGL 300

Query: 148  LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL-GIAADSYTF----- 201
            +   + +F ++D+      N LM   ++    +E+  +FK+M+ L  I A SY       
Sbjct: 301  IDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLSAF 360

Query: 202  ----------------------SCVLKCLAVVGNS--------RRVKDAHKLFDELSDRD 231
                                  + ++    ++GN+          + +A  +F  +  +D
Sbjct: 361  TEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKD 420

Query: 232  VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
             VSWN +ISG   N   E+ +  F  M   G      ++++ LS CA+ G +M G+ +H 
Sbjct: 421  TVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHG 480

Query: 292  FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA-REGVFD 350
              +K     ++S +N LL +Y++   ++   +VF  M E   VSW S I   A  E    
Sbjct: 481  EGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVL 540

Query: 351  GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
             AI+ F  M++ G +P+     +IL A +   LLE+G+ +H  I ++ +     + N L+
Sbjct: 541  QAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLL 600

Query: 411  DMYAKCGSMADAESVFNQMP-VKDIVSWNTMIG----------ALDLFVAMLQNFEP-DG 458
              Y KC  M D E +F++M   +D VSWN MI           A+ L   M+Q  +  D 
Sbjct: 601  AFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDD 660

Query: 459  VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
             T+A +L ACAS+A LERG E+H   +R  + A+  V +A+VDMY KCG +  A   F++
Sbjct: 661  FTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFEL 720

Query: 519  IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
            +P +++ SW  MI+GY  HG G  A+  F  M+Q G  PD V+F+ VL ACSH GLVDEG
Sbjct: 721  MPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEG 780

Query: 579  WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG-C 637
            +  F  M     + P++EH++CMVDLL R G++ +   FI+ MP+ P+A IW ++L   C
Sbjct: 781  FEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACC 840

Query: 638  RIH-HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
            R +    +L  + A+ + ELEP N   YVLL+N++A   KWE+V++ R  +    +KK  
Sbjct: 841  RANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEA 900

Query: 697  GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
            GCSW+ +K  V++FVAG  +HP  +KI   LK +  +M+  GY P+T+YAL + +   KE
Sbjct: 901  GCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKE 960

Query: 757  VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
              L  HSEKLA+AF +L   +   IR+ KNLRVCGDCH   K++S    R+I+LRDSNRF
Sbjct: 961  ELLSYHSEKLAIAF-VLTRQSELPIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRF 1019

Query: 817  HHFKDGRCSCRGFW 830
            HHF  G CSC+ +W
Sbjct: 1020 HHFDGGICSCQDYW 1033



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 250/492 (50%), Gaps = 29/492 (5%)

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE 226
           NL  + Y  +   +++  L  ++   G+ +D +  + ++      GN   +  A KLFDE
Sbjct: 43  NLDYNRYRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGN---LVSAQKLFDE 99

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA--LM 284
           +  +++VSW+C++SGY  NG+ ++   +F+ +++ G   +   + + L  C   G   L 
Sbjct: 100 MPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLK 159

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKC-GDLDGAIRVFEKMGERSVVSWTSMIAGY 343
            G  +H    K+ ++ ++  +N L+ MYS C   +D A RVFE++  ++  SW S+I+ Y
Sbjct: 160 LGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVY 219

Query: 344 AREGVFDGAIRLFRGMVREGIE----PDVYAITSILH-ACA-CDGLLEIGKDVHDYIKEN 397
            R G    A +LF  M RE  E    P+ Y   S++  AC+  D  L + + +   I+++
Sbjct: 220 CRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKS 279

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN-TMIG---------ALDLF 447
                LYV +AL+  +A+ G +  A+ +F QM  ++ V+ N  M+G         A  +F
Sbjct: 280 SFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIF 339

Query: 448 VAMLQNFEPDGVTMACILPACASLAALE----RGREIHGYILRHG-ISADRNVANAIVDM 502
             M    E +  + A +L A    + L+    +G+E+H Y++R+  +     + NA+V++
Sbjct: 340 KEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNL 399

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KC  +  ARS+F ++P+KD +SW  +I+G   +    +A+A F+ MR+ G+ P + S 
Sbjct: 400 YAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSV 459

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           IS L +C+  G +  G +       +C ++  +     ++ L + T  + E  +   +MP
Sbjct: 460 ISTLSSCASLGWIMLGQQIHG-EGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMP 518

Query: 623 VAPDATIWGSLL 634
              D   W S +
Sbjct: 519 -EYDQVSWNSFI 529



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 247/514 (48%), Gaps = 62/514 (12%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
           ++ED  ++H  I ++G+   D    + LV +FV  G+L   +++F+++    +  W+ L+
Sbjct: 54  TVEDAHQLHLQIYKTGLT-SDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLV 112

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN----------------- 213
             Y++ G   E+  LF+ + S G+  + Y     L+    +G                  
Sbjct: 113 SGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSP 172

Query: 214 ------------------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                             S  + DA ++F+E+  +   SWN +IS Y   G A    ++F
Sbjct: 173 YASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLF 232

Query: 256 KEM------LNLGFN-VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
             M      LN   N     ++VTV     +CG  +  + + A   K+ F K++   + L
Sbjct: 233 SSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQML-ARIEKSSFVKDLYVGSAL 291

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           +  +++ G +D A  +FE+M +R+ V+   ++ G AR+   + A ++F+ M ++ +E + 
Sbjct: 292 VSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINA 350

Query: 369 YAITSILHACACDGLLEIGK----DVHDYIKENDMQSS-LYVSNALMDMYAKCGSMADAE 423
            +   +L A      L+ GK    +VH Y+  N +    + + NAL+++YAKC ++ +A 
Sbjct: 351 SSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNAR 410

Query: 424 SVFNQMPVKDIVSWNTMIGALD----------LFVAMLQN-FEPDGVTMACILPACASLA 472
           S+F  MP KD VSWN++I  LD           F  M +N   P   ++   L +CASL 
Sbjct: 411 SIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLG 470

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
            +  G++IHG  ++ G+  D +V+NA++ +Y +   +   + +F ++P  D +SW   I 
Sbjct: 471 WIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIG 530

Query: 533 GYGMHGFGC-DAIATFNDMRQAGIEPDEVSFISV 565
                      AI  F +M QAG +P+ V+FI++
Sbjct: 531 ALATSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 196/390 (50%), Gaps = 36/390 (9%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H    K   + ++ + NTL++++ + G+L  A ++F++M ++++VSW+ +++GYA+ G+
Sbjct: 61  LHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGM 120

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDG--LLEIGKDVHDYIKENDMQSSLYVS 406
            D A  LFRG++  G+ P+ YAI S L AC   G  +L++G ++H  I ++   S + +S
Sbjct: 121 PDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLS 180

Query: 407 NALMDMYAKC-GSMADAESVFNQMPVKDIVSWNTM----------IGALDLFVAMLQ--- 452
           N LM MY+ C  S+ DA  VF ++ +K   SWN++          I A  LF +M +   
Sbjct: 181 NVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREAT 240

Query: 453 --NFEPDG------VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
             N  P+       VT+AC L  C  L  LE   ++   I +     D  V +A+V  + 
Sbjct: 241 ELNCRPNEYTFCSLVTVACSLVDCG-LTLLE---QMLARIEKSSFVKDLYVGSALVSGFA 296

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           + G++  A+ +F+ +  ++ ++   ++ G      G +A   F +M+   +E +  S+  
Sbjct: 297 RYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAV 355

Query: 565 VLYACSHSGLVDEGWR----FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +L A +    + EG R        +     ++  +     +V+L ++   +  A    ++
Sbjct: 356 LLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQL 415

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           MP + D   W S++ G  + H  +  E VA
Sbjct: 416 MP-SKDTVSWNSIISG--LDHNERFEEAVA 442


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 270/808 (33%), Positives = 421/808 (52%), Gaps = 46/808 (5%)

Query: 68   AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSIICES 125
            A I    + G  E+A+ +      S+I    Y   S+L     ++  E G+++H ++ + 
Sbjct: 231  AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKW 290

Query: 126  GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
            G   +  V    LV ++     L    R+F+ +++     +N L+    + G    +L L
Sbjct: 291  GFHSETYVCNG-LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALEL 349

Query: 186  FKKMQSLGIAADSYTFSCVLKCLAVVGNSRR----------------------------- 216
            F KMQ   +  D  T + +L   A VG   +                             
Sbjct: 350  FTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSK 409

Query: 217  ---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
               V+ AHK F      ++V WN M+  Y          E+F++M   G   +  T  ++
Sbjct: 410  CADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSI 469

Query: 274  LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
            L  C + GAL  G  +H   +K  F   +   + L+DMY+K G L  A+R+  ++ E  V
Sbjct: 470  LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDV 529

Query: 334  VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
            VSWT+MIAGY +  +F  A++LF  M   GI+ D     S + ACA    L  G+ +H  
Sbjct: 530  VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ 589

Query: 394  IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
                   + L ++NAL+ +YA+CG + +A   F ++  K+ +SWN+++           A
Sbjct: 590  SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEA 649

Query: 444  LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
            L +FV ML+   E +  T    + A ASLA +++G++IH  +L+ G  ++R V+N+++ +
Sbjct: 650  LQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISL 709

Query: 503  YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
            Y K G +  A   F+ +  +++ISW  MI GY  HG G +A+  F +M+  GI P+ V+F
Sbjct: 710  YAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTF 769

Query: 563  ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
            + VL ACSH GLV EG  +F  M    ++ PK EHY C+VDLL R G L  A  +I+ MP
Sbjct: 770  VGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMP 829

Query: 623  VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
            +  DA IW +LL  C IH  +++ E+ A H+ ELEP+++  YVL++N+YA + +W     
Sbjct: 830  IPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDW 889

Query: 683  LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
             R+ +  RG+KK PG SWIE+K  V+ F AG   HP   +I   +  L       GY   
Sbjct: 890  SRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQD 949

Query: 743  TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
            +   L  +++ +K+     HSEKLA+AFG+L+L     IRV KNLRVC DCH   K++SK
Sbjct: 950  SFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSK 1009

Query: 803  TARREIVLRDSNRFHHFKDGRCSCRGFW 830
             + R I++RD++RFHHF  G CSC+ FW
Sbjct: 1010 ISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 173/591 (29%), Positives = 280/591 (47%), Gaps = 57/591 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG--VLGSKLVFMFVTCGDLKEGR 152
           + + Y  +L+ C    SL +  ++H  I +SG    DG  +L   LV  +   GD     
Sbjct: 57  NYQNYLWLLEGCLTSGSLFETMRLHCRISKSGF---DGEPLLIDSLVDNYFRHGDQHGAV 113

Query: 153 RVFNKIDNGKVFIWNLLMHEY-SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
           +VF++  N  VF WN ++H + ++  NF +   LF++M + GI  + YTF+ VLK  A V
Sbjct: 114 KVFDENSNRSVFSWNKMIHVFVAQKSNF-QVFCLFRRMLAEGITPNGYTFAGVLK--ACV 170

Query: 212 G-----------NSRR------------------------VKDAHKLFDELSDRDVVSWN 236
           G           +SR                         ++ A K+F+ +  +D+V+W 
Sbjct: 171 GGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWV 230

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MISG   NG+ E+ + +F +M           + +VLS          G  +H   +K 
Sbjct: 231 AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKW 290

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            F  E    N L+ +YS+   L  A R+F  M  R  VS+ S+I+G  ++G  D A+ LF
Sbjct: 291 GFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELF 350

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M R+ ++PD   + S+L ACA  G L  G  +H +  +  M + + +  +L+D+Y+KC
Sbjct: 351 TKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKC 410

Query: 417 GSMADAESVFNQMPVKDIVSWNTMI---GALD-------LFVAM-LQNFEPDGVTMACIL 465
             +  A   F     ++IV WN M+   G LD       +F  M ++   P+  T   IL
Sbjct: 411 ADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSIL 470

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
             C SL AL  G +IH ++++ G   +  V + ++DMY K G L LA  +   +P  D++
Sbjct: 471 RTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVV 530

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           SWT MIAGY  H    +A+  F +M   GI+ D + F S + AC+    + +G +  +  
Sbjct: 531 SWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ-IHAQ 589

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            Y       L     ++ L +R G + EAY   E +    + + W SL+ G
Sbjct: 590 SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSG 639



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 168/610 (27%), Positives = 296/610 (48%), Gaps = 57/610 (9%)

Query: 98  TYCSILQLC--ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVF 155
           T+  +L+ C   D+ +    K+VHS     G      ++ + L+ ++   G ++  ++VF
Sbjct: 161 TFAGVLKACVGGDI-AFNYVKQVHSRTFYYGFD-SSPLVANLLIDLYSKNGYIESAKKVF 218

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK--------- 206
           N I    +  W  ++   S+ G  +E++ LF  M +  I    Y  S VL          
Sbjct: 219 NCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFE 278

Query: 207 ------CL-----------------AVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                 CL                 A+   SR++  A ++F  ++ RD VS+N +ISG +
Sbjct: 279 LGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLV 338

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
             G +++ LE+F +M       D  T+ ++LS CA+ GAL  G  +H+ A+KA  S +I 
Sbjct: 339 QQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADII 398

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
              +LLD+YSKC D++ A + F      ++V W  M+  Y +      +  +FR M  EG
Sbjct: 399 LEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEG 458

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           + P+ +   SIL  C   G L +G+ +H ++ +   Q ++YV + L+DMYAK G +A A 
Sbjct: 459 MIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALAL 518

Query: 424 SVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNFEP--------DGVTMACILPACASLA 472
            +  ++P  D+VSW  MI      D+F   LQ FE         D +  A  + ACA + 
Sbjct: 519 RILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIR 578

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           AL +G++IH      G  AD ++ NA++ +Y +CG +  A   F+ I  K+ ISW  +++
Sbjct: 579 ALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVS 638

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           G    G+  +A+  F  M +   E +  ++ S + A +    + +G +  +M+  +   +
Sbjct: 639 GLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMV-LKTGYD 697

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMP----VAPDATIWGSLLCGC-----RIHHEV 643
            + E    ++ L +++G++S+A+R    M     ++ +A I G    GC     R+  E+
Sbjct: 698 SEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEM 757

Query: 644 KLAEKVAEHV 653
           K+   +  HV
Sbjct: 758 KVCGIMPNHV 767



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 256/520 (49%), Gaps = 48/520 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +YN+ I    + G  ++A+E+    ++   K D  T  S+L  CA + +L  G ++HS  
Sbjct: 329 SYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHA 388

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G+  D  +L   L+ ++  C D++   + F   +   + +WN+++  Y +  N  +S
Sbjct: 389 IKAGMSADI-ILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDS 447

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG--------NSRRVKD--------------- 219
             +F++MQ  G+  + +T+  +L+    +G        ++  +K                
Sbjct: 448 FEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDM 507

Query: 220 ---------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                    A ++   L + DVVSW  MI+GY+ + +  + L++F+EM   G   D    
Sbjct: 508 YAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGF 567

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + +S CA   AL  G+ +HA +  A F  ++S NN L+ +Y++CG +  A   FEK+G+
Sbjct: 568 ASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGD 627

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           ++ +SW S+++G A+ G F+ A+++F  M+R   E +++   S + A A    ++ G+ +
Sbjct: 628 KNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQI 687

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  + +    S   VSN+L+ +YAK GS++DA   FN M  ++++SWN MI         
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCG 747

Query: 443 --ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANA 498
             AL LF  M +    P+ VT   +L AC+ +  ++ G +    + + H +         
Sbjct: 748 MEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVC 807

Query: 499 IVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
           +VD+  + G L  A      +P   D + W  +++   +H
Sbjct: 808 VVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIH 847



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 190/398 (47%), Gaps = 16/398 (4%)

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           K +++   M   G   +    + +L GC   G+L     +H    K+ F  E    ++L+
Sbjct: 41  KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           D Y + GD  GA++VF++   RSV SW  MI  +  +        LFR M+ EGI P+ Y
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160

Query: 370 AITSILHAC-ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               +L AC   D      K VH         SS  V+N L+D+Y+K G +  A+ VFN 
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220

Query: 429 MPVKDIVSWNTMIGALD----------LFVAM-LQNFEPDGVTMACILPACASLAALERG 477
           + +KDIV+W  MI  L           LF  M      P    ++ +L A   +   E G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
            ++H  +++ G  ++  V N +V +Y +   L+ A  +F  + ++D +S+  +I+G    
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLE 596
           GF   A+  F  M++  ++PD ++  S+L AC+  G + +G +   + ++   + +  LE
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
               ++DL S+  ++  A++F  +     +  +W  +L
Sbjct: 401 --GSLLDLYSKCADVETAHKFF-LTTETENIVLWNVML 435



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 112/234 (47%), Gaps = 15/234 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ +    + G  E+A++V       +++++  TY S +   A L +++ G+++HS++
Sbjct: 632 SWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMV 691

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G   +  V  S L+ ++   G + +  R FN +    V  WN ++  YS+ G   E+
Sbjct: 692 LKTGYDSEREVSNS-LISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEA 750

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-RDVVS----WNC 237
           L LF++M+  GI  +  TF  VL   + +G    VK+    F+ +    D+V     + C
Sbjct: 751 LRLFEEMKVCGIMPNHVTFVGVLSACSHIG---LVKEGLDYFESMFKIHDLVPKSEHYVC 807

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVH 290
           ++      G  ++ +E  KEM       D     T+LS C     +  G RA H
Sbjct: 808 VVDLLGRAGQLDRAMEYIKEM---PIPADAMIWRTLLSACVIHKNIEIGERAAH 858


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/637 (39%), Positives = 356/637 (55%), Gaps = 81/637 (12%)

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S   +C A    RA+HA A+ +  +++    ++LL  Y + G    A  VF++M E++VV
Sbjct: 25  SALKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVV 84

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY-----------------AITSILH- 376
            W+++IAGY+  G  + A  L   M   G+EP+V                  A+T+++  
Sbjct: 85  GWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRM 144

Query: 377 ------------ACACDGL-----LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
                       +CA   +     + +GK VH Y+ +   +    V  AL+DMY KCG  
Sbjct: 145 HSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRA 204

Query: 420 ADAESVFNQMPVKDI-----------------------------------VSWNTMIG-- 442
            +   VF++    D+                                   VSW +++   
Sbjct: 205 DEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACC 264

Query: 443 --------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                   A+DLF  M     EP+ VT+ C+LPA A++AAL  GR  H + LR G   D 
Sbjct: 265 VQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDV 324

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            V +A+VDMY KCG    AR++FD +P+++++SW  MI GY MHG   +A+  F  M++ 
Sbjct: 325 YVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKC 384

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
             +PD V+F  VL ACS +GL +EG R+FN M+    I P++EHYACMV LL R+G L E
Sbjct: 385 KQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDE 444

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           AY  I  MP  PD+ IWGSLL  CR++  V LAE  AE +F+LEP N G YVLL+N+YA 
Sbjct: 445 AYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYAS 504

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
            + W+ V ++R+++   GLKK  GCSWIEIK KV++ +AG +SHP    I   L +L +E
Sbjct: 505 KKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIE 564

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           M R G+ P   + L + +E EK+  L  HSEKLA+A G+++   G  +RV KNLR+CGDC
Sbjct: 565 MNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLRICGDC 624

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           HE  KF+S   +REI +RD+NRFHHFKDG+CSC  +W
Sbjct: 625 HEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 199/471 (42%), Gaps = 83/471 (17%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           + +H+    SG+  +D  + S L+  ++  G     R VF+++    V  W+ L+  YS 
Sbjct: 37  RALHAAAVVSGLA-EDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSA 95

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSW 235
            G+ + +  L ++M+S G+                                  + +V++W
Sbjct: 96  RGDAEAAWGLLEQMRSAGV----------------------------------EPNVITW 121

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N ++SG   +G A   +     M + GF  D   +   LS   +   +  G+ VH + +K
Sbjct: 122 NGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVK 181

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-------------------------- 329
           A    +      L+DMY KCG  D  +RVF +                            
Sbjct: 182 AGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLL 241

Query: 330 ---------ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
                    E +VVSWTS++A   + G    A+ LFR M   G+EP+   I  +L A A 
Sbjct: 242 FREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFAN 301

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              L  G+  H +         +YV +AL+DMYAKCG    A ++F+ MP +++VSWN M
Sbjct: 302 VAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAM 361

Query: 441 IG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HG 488
           IG          A+ LF +M +   +PD VT  C+L AC+     E GR     + + HG
Sbjct: 362 IGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHG 421

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
           IS        +V +  + G L  A  L + +P   D   W  ++    ++G
Sbjct: 422 ISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYG 472



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 168/347 (48%), Gaps = 37/347 (10%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           L    D+K +  GK+VH  + ++G  +D  V+ + L+ M+  CG   E  RVF++  +  
Sbjct: 160 LSAVGDVKEVSVGKQVHGYVVKAGCRLDACVV-TALIDMYGKCGRADEIVRVFHESSHMD 218

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           V   N L+   S+     E+L LF++    G+                            
Sbjct: 219 VASCNALVAGLSRNAQVSEALLLFREFICRGV---------------------------- 250

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
                 + +VVSW  +++  + NG   + +++F+ M ++G   +  T+  VL   AN  A
Sbjct: 251 ------ELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAA 304

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           LM GR+ H F+L+  F  ++   + L+DMY+KCG    A  +F+ M  R+VVSW +MI G
Sbjct: 305 LMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGG 364

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           YA  G    A++LF  M +   +PD+   T +L AC+  GL E G+   + +++    S 
Sbjct: 365 YAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISP 424

Query: 403 LYVSNALM-DMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLF 447
                A M  +  + G + +A  + N+MP + D   W +++G+  ++
Sbjct: 425 RMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVY 471



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 3/121 (2%)

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
           +F PD   +   L +C    A    R +H   +  G++ D  VA++++  Y++ G    A
Sbjct: 15  SFPPDPHLLPSALKSCP---AQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAA 71

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           RS+FD +P K+++ W+ +IAGY   G    A      MR AG+EP+ +++  ++   + S
Sbjct: 72  RSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRS 131

Query: 573 G 573
           G
Sbjct: 132 G 132



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 23/266 (8%)

Query: 71  GRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           GR  E  +L + M+    S   + ++ T   +L   A++ +L  G+  H      G  + 
Sbjct: 268 GRDLEAVDLFRTMQ----SIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGF-LH 322

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D  +GS LV M+  CG  +  R +F+ + +  V  WN ++  Y+  G+   ++ LF  MQ
Sbjct: 323 DVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQ 382

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIAN 245
                 D  TF+CVL   +  G +   ++  + F+E+     +S     + CM++    +
Sbjct: 383 KCKQKPDLVTFTCVLGACSQAGLT---EEGRRYFNEMQQGHGISPRMEHYACMVTLLGRS 439

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI--S 303
           G  ++  ++  EM    F  D     ++L  C   G ++        A +  F  E   +
Sbjct: 440 GKLDEAYDLINEM---PFEPDSCIWGSLLGSCRVYGNVLLAE----VAAEKLFQLEPGNA 492

Query: 304 FNNTLL-DMYSKCGDLDGAIRVFEKM 328
            N  LL ++Y+     DG  RV ++M
Sbjct: 493 GNYVLLSNIYASKKMWDGVNRVRDEM 518


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 224/503 (44%), Positives = 322/503 (64%), Gaps = 12/503 (2%)

Query: 320 GAIR-VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
           G++R VFE M +R +VSW ++I+G A+ G+ + A+ + R M    + PD + ++S+L   
Sbjct: 147 GSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIF 206

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
           A    L  GK++H Y   N   + +++ ++L+DMYAKC  + D+  VF  +P  D +SWN
Sbjct: 207 AEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWN 266

Query: 439 TMIGA----------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRH 487
           ++I            L  F  ML    +P+ V+ + I+PACA L  L  G+++HGYI+R 
Sbjct: 267 SIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRS 326

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
               +  +A+A+VDMY KCG +  AR +FD +   D++SWT MI GY +HG   DAI+ F
Sbjct: 327 RFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLF 386

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
             M   G++P+ V+F++VL ACSH+GLVDE W++FN M  +  I P LEHYA + DLL R
Sbjct: 387 KRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGR 446

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            G L EAY FI  M + P  ++W +LL  CR+H  ++LAEKV++ +F ++P N G YVLL
Sbjct: 447 VGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLL 506

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLL 727
           +N+Y+ A +W++ +KLR  +  +G+KK P CSWIEIK KV+ FVAG  SHP+  +I   L
Sbjct: 507 SNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEAL 566

Query: 728 KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNL 787
           K L  +M+REGY   T   L + +E +K   LC HSE+LA+ FGI++ PAG TIRVTKNL
Sbjct: 567 KVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNL 626

Query: 788 RVCGDCHEMAKFMSKTARREIVL 810
           RVC DCH   KF+SK   REIV 
Sbjct: 627 RVCVDCHTATKFISKIVGREIVF 649



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 152/259 (58%), Gaps = 11/259 (4%)

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           K+F+ +  RD+VSWN +ISG   NG+ E  L + +EM N     D  T+ +VL   A   
Sbjct: 151 KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYV 210

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            L+ G+ +H +A++  +  ++   ++L+DMY+KC  +D + RVF  + +   +SW S+IA
Sbjct: 211 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 270

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           G  + G+FD  ++ F+ M+   I+P+  + +SI+ ACA    L +GK +H YI  +    
Sbjct: 271 GCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDG 330

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM- 450
           ++++++AL+DMYAKCG++  A  +F++M + D+VSW  MI           A+ LF  M 
Sbjct: 331 NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRME 390

Query: 451 LQNFEPDGVTMACILPACA 469
           ++  +P+ V    +L AC+
Sbjct: 391 VEGVKPNYVAFMAVLTACS 409



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 164/326 (50%), Gaps = 34/326 (10%)

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-- 209
           R+VF  +    +  WN ++   ++ G  +++L + ++M +  +  DS+T S VL   A  
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 209

Query: 210 ----------------------VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMI 239
                                  +G+S         RV D+ ++F  L   D +SWN +I
Sbjct: 210 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 269

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           +G + NG+ ++GL+ F++ML      +  +  +++  CA+   L  G+ +H + +++ F 
Sbjct: 270 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD 329

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
             +   + L+DMY+KCG++  A  +F+KM    +VSWT+MI GYA  G    AI LF+ M
Sbjct: 330 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 389

Query: 360 VREGIEPDVYAITSILHACACDGLL-EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
             EG++P+  A  ++L AC+  GL+ E  K  +   ++  +   L    A+ D+  + G 
Sbjct: 390 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGR 449

Query: 419 MADAESVFNQMPVKDIVS-WNTMIGA 443
           + +A    + M ++   S W+T++ A
Sbjct: 450 LEEAYEFISDMHIEPTGSVWSTLLAA 475



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 33/219 (15%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D+ T  S+L + A+  +L  GK++H     +G   D   +GS L+ M+  C  + +  RV
Sbjct: 195 DSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDAD-VFIGSSLIDMYAKCTRVDDSCRV 253

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----- 209
           F  +       WN ++    + G F E L  F++M    I  +  +FS ++   A     
Sbjct: 254 FYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTL 313

Query: 210 --------VVGNSR-------------------RVKDAHKLFDELSDRDVVSWNCMISGY 242
                    +  SR                    ++ A  +FD++   D+VSW  MI GY
Sbjct: 314 HLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGY 373

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
             +G A   + +FK M   G   +    + VL+ C++ G
Sbjct: 374 ALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAG 412



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 8/140 (5%)

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG--VLGSKLVFMFVTCGDL 148
           K K +  ++ SI+  CA L +L  GK++H  I  S     DG   + S LV M+  CG++
Sbjct: 292 KIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF---DGNVFIASALVDMYAKCGNI 348

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           +  R +F+K++   +  W  ++  Y+  G+  +++ LFK+M+  G+  +   F  VL   
Sbjct: 349 RTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTAC 408

Query: 209 AVVGNSRRVKDAHKLFDELS 228
           +  G    V +A K F+ ++
Sbjct: 409 SHAG---LVDEAWKYFNSMT 425


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 289/814 (35%), Positives = 420/814 (51%), Gaps = 84/814 (10%)

Query: 96  TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG---DLKEGR 152
           TK   S L+ C   K++++ K  H  + + G+  D   + +KLV      G    L   +
Sbjct: 32  TKATPSSLKNC---KTIDELKMFHRSLTKQGLDNDVSTI-TKLVARSCELGTRESLSFAK 87

Query: 153 RVF-NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-- 209
            VF N    G  F++N L+  Y+ +G   E++ LF +M + GI+ D YTF   L   A  
Sbjct: 88  EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147

Query: 210 -VVGNSRRV----------KD-------------------AHKLFDELSDRDVVSWNCMI 239
              GN  ++          KD                   A K+FDE+S+R+VVSW  MI
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207

Query: 240 SGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
            GY     A+  +++F  M+ +     +  TMV V+S CA    L  G  V+AF   +  
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
                  + L+DMY KC  +D A R+F++ G  ++    +M + Y R+G+   A+ +F  
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC-- 416
           M+  G+ PD  ++ S + +C+    +  GK  H Y+  N  +S   + NAL+DMY KC  
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 387

Query: 417 -----------------------------GSMADAESVFNQMPVKDIVSWNTMIG----- 442
                                        G +  A   F  MP K+IVSWNT+I      
Sbjct: 388 QDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQG 447

Query: 443 -----ALDLFVAML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                A+++F +M   +    DGVTM  I  AC  L AL+  + I+ YI ++GI  D  +
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
              +VDM+ +CG    A S+F+ +  +D+ +WT  I    M G    AI  F+DM + G+
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           +PD V+F+  L ACSH GLV +G   F  M     + P+  HY CMVDLL R G L EA 
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
           + IE MP+ P+  IW SLL  CR+   V++A   AE +  L P+ TG YVLL+NVYA A 
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687

Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
           +W ++ K+R  +  +GL+K PG S I+I+GK + F +G  SHP    IE++L  +     
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRAS 747

Query: 736 REGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHE 795
             G+ P     L++ DE EK   L  HSEKLAMA+G+++   G TIR+ KNLRVC DCH 
Sbjct: 748 HLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHS 807

Query: 796 MAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
            AKF SK   REI+LRD+NRFH+ + G+CSC  F
Sbjct: 808 FAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 254/554 (45%), Gaps = 83/554 (14%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           YN+ I  +   G   +A+ +      S I  D  T+   L  CA  ++  +G ++H +I 
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G   D  V  S LV  +  CG+L   R+VF+++    V  W  ++  Y++    K+++
Sbjct: 162 KMGYAKDLFVQNS-LVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220

Query: 184 YLFKKM-QSLGIAADSYTFSCVL-------------KCLAVVGNS--------------- 214
            LF +M +   +  +S T  CV+             K  A + NS               
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 +  A +LFDE    ++   N M S Y+  G+  + L VF  M++ G   D  +M
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           ++ +S C+    +++G++ H + L+  F    +  N L+DMY KC   D A R+F++M  
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGM------------------------------- 359
           ++VV+W S++AGY   G  D A   F  M                               
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460

Query: 360 -VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
             +EG+  D   + SI  AC   G L++ K ++ YI++N +Q  + +   L+DM+++CG 
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPA 467
              A S+FN +  +D+ +W   IG          A++LF  M+ Q  +PDGV     L A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580

Query: 468 CASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP--AKDL 524
           C+    +++G+EI   +L+ HG+S +      +VD+  + G+L  A  L + +P    D+
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640

Query: 525 ISWTIMIAGYGMHG 538
           I W  ++A   + G
Sbjct: 641 I-WNSLLAACRVQG 653



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 14/203 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  I    +    E+A+EV   + S E    D  T  SI   C  L +L+  K ++  
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I ++GI +D   LG+ LV MF  CGD +    +FN + N  V  W   +   +  GN + 
Sbjct: 496 IEKNGIQLD-VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL------SDRDVVSW 235
           ++ LF  M   G+  D   F   +  L    +   V+   ++F  +      S  D V +
Sbjct: 555 AIELFDDMIEQGLKPDGVAF---VGALTACSHGGLVQQGKEIFYSMLKLHGVSPED-VHY 610

Query: 236 NCMISGYIANGVAEKGLEVFKEM 258
            CM+      G+ E+ +++ ++M
Sbjct: 611 GCMVDLLGRAGLLEEAVQLIEDM 633


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/670 (35%), Positives = 387/670 (57%), Gaps = 45/670 (6%)

Query: 113 EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFIWNLLMH 171
           ++GK++HS I  + +  D   L + L+  +  CG   E R +F K+ D   +  WN+++ 
Sbjct: 156 KEGKQIHSYIVRNMLNFDP-FLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIG 214

Query: 172 EYSKTGNFKESL--YLFKKMQSLGIAADSYT-------------FSCVLKC--------- 207
            + + G ++ SL  YL  K +++ + + S+T             F   + C         
Sbjct: 215 GFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFED 274

Query: 208 --------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
                   L + G  + ++ A K+F+E+ D+++  WN +IS Y+ NG A   L ++K+M 
Sbjct: 275 DPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMK 334

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
                 D  T++ VL+  +  G    GR +H   +K      I+  + LL MYSK GD +
Sbjct: 335 LCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSN 394

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A  +F  M ER VV+W S+I+G+ +   +  A+  FR M  + ++PD   + SI+ AC 
Sbjct: 395 YANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACT 454

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               +++G  +H ++ ++ +Q  ++V+++L+DMY+K G    A ++F+ MP+K++V+WN+
Sbjct: 455 GLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNS 514

Query: 440 MIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           +I           +++LF  +L+N   PD V+   +L A +S+AAL +G+ +HGY++R  
Sbjct: 515 IISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLW 574

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
           I  D  V N ++DMY+KCG+L  A+ +F+ I  K+L++W  MI GYG HG    AI  F+
Sbjct: 575 IPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFD 634

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
           +MR +GI+PD+V+F+S+L +C+HSGL++EG   F MM+ +  IEP++EHY  +VDL  R 
Sbjct: 635 EMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRA 694

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           G L +AY F++ MPV PD +IW SLLC C+IH  ++L E VA  +  +EP     YV L 
Sbjct: 695 GCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLL 754

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           N+Y EAE W+    LR  +  +GLKK PGCSWIE++ KV++F +G  S P   +I   L 
Sbjct: 755 NLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLS 814

Query: 729 RLRLEMKREG 738
            L+  M ++G
Sbjct: 815 SLKRNMIKKG 824



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 176/623 (28%), Positives = 316/623 (50%), Gaps = 38/623 (6%)

Query: 81  KAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           + +E L    KS + T   TY S+L+ CA L +L+ GK +HS I  +G+   D  + S L
Sbjct: 36  QYIEALKLYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLH-SDQYITSSL 94

Query: 139 VFMFVTCGDLKEGRRVFNKIDNG-----KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           + ++V CG   +  +VF+++         V IWN ++  Y + G  +E +  F +MQS G
Sbjct: 95  INIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSG 154

Query: 194 IAADSYTFSCVLKCL---------AVVGNS---RRVKDAHKLFDELSDR-DVVSWNCMIS 240
                   S +++ +         A++       R  +A  LF +L DR ++V+WN MI 
Sbjct: 155 YKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIG 214

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G+  NG+ E  LE +         V  ++    LS C     + FG+ VH  A+K  F  
Sbjct: 215 GFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFED 274

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           +   + +LL MY KC  ++ A +VF ++ ++ +  W ++I+ Y   G    A+R+++ M 
Sbjct: 275 DPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMK 334

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
              +  D + I ++L + +  GL ++G+ +H  I +  +QSS+ + +AL+ MY+K G   
Sbjct: 335 LCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSN 394

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNF-EPDGVTMACILPACA 469
            A S+F+ M  +D+V+W ++I           ALD F AM  +  +PD   MA I+ AC 
Sbjct: 395 YANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACT 454

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            L  ++ G  IHG++++ G+  D  VA++++DMY K G    A ++F  +P K+L++W  
Sbjct: 455 GLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNS 514

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYE 588
           +I+ Y  +     +I  F+ + +  + PD VSF SVL A S    + +G      ++R  
Sbjct: 515 IISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLW 574

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
              + ++E+   ++D+  + G L  A    E +    +   W S++ G   H E   A +
Sbjct: 575 IPFDLQVEN--TLIDMYIKCGLLKYAQHIFERIS-EKNLVAWNSMIGGYGSHGECSKAIE 631

Query: 649 VAEHVFE--LEPDNTGYYVLLAN 669
           + + +    ++PD+  +  LL++
Sbjct: 632 LFDEMRSSGIKPDDVTFLSLLSS 654


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/676 (37%), Positives = 381/676 (56%), Gaps = 19/676 (2%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR--RVKDAHKLFDE 226
           ++  Y+KT   +      K++ +L I A  YT    L    V   S+   +  A KLFD 
Sbjct: 11  VIQTYAKTKRLRRG----KQLHALLICA-GYTPCTFLTNHLVNMYSKCGELDHALKLFDT 65

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           +  R++VSW  MISG   N    + +  F  M   G         + +  CA+ G++  G
Sbjct: 66  MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           + +H  ALK     E+   + L DMYSKCG +  A +VFE+M  +  VSWT+MI GY++ 
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 185

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G F+ A+  F+ M+ E +  D + + S L AC      + G+ VH  + +   +S ++V 
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245

Query: 407 NALMDMYAKCGSMADAESVFN-QMPVKDIVSWNTMIGA----------LDLFVAML-QNF 454
           NAL DMY+K G M  A +VF      +++VS+  +I            L +FV +  Q  
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
           EP+  T + ++ ACA+ AALE+G ++H  +++     D  V++ +VDMY KCG+L  A  
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 365

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
            FD I     I+W  +++ +G HG G DAI  F  M   G++P+ ++FIS+L  CSH+GL
Sbjct: 366 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 425

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           V+EG  +F  M     + P  EHY+C++DLL R G L EA  FI  MP  P+A  W S L
Sbjct: 426 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             CRIH + ++ +  AE + +LEP N+G  VLL+N+YA   +WE+V+ +R ++    +KK
Sbjct: 486 GACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK 545

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
            PG SW+++  K ++F A   SHP    I   L  L  ++K  GY P+T    ++ D+  
Sbjct: 546 LPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSM 605

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
           KE  L  HSE++A+AF ++++P G+ I V KNLRVC DCH   KF+SK   R+I++RD++
Sbjct: 606 KEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNS 665

Query: 815 RFHHFKDGRCSCRGFW 830
           RFHHF DG CSC  +W
Sbjct: 666 RFHHFTDGSCSCGDYW 681



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 224/418 (53%), Gaps = 18/418 (4%)

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D   +  V+   A    L  G+ +HA  + A ++      N L++MYSKCG+LD A+++F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           + M +R++VSWT+MI+G ++   F  AIR F GM   G  P  +A +S + ACA  G +E
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
           +GK +H    +  + S L+V + L DMY+KCG+M DA  VF +MP KD VSW  MI    
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 443 -------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  AL  F  M+ +    D   +   L AC +L A + GR +H  +++ G  +D  
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243

Query: 495 VANAIVDMYVKCGVLVLARSLFDM-IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
           V NA+ DMY K G +  A ++F +    ++++S+T +I GY         ++ F ++R+ 
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           GIEP+E +F S++ AC++   +++G +    +M+   + +P +   + +VD+  + G L 
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLE 361

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
           +A +  + +   P    W SL+     H   K A K+ E + +  ++P+   +  LL 
Sbjct: 362 QAIQAFDEIG-DPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLT 418



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 224/490 (45%), Gaps = 47/490 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           DT     ++Q  A  K L  GK++H+++  +G       L + LV M+  CG+L    ++
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYT-PCTFLTNHLVNMYSKCGELDHALKL 62

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+ +    +  W  ++   S+   F E++  F  M+  G     + FS  ++  A +G+ 
Sbjct: 63  FDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122

Query: 215 RRVKDAH--------------------------------KLFDELSDRDVVSWNCMISGY 242
              K  H                                K+F+E+  +D VSW  MI GY
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
              G  E+ L  FK+M++    +D   + + L  C    A  FGR+VH+  +K  F  +I
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGE-RSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
              N L DMYSK GD++ A  VF    E R+VVS+T +I GY      +  + +F  + R
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           +GIEP+ +  +S++ ACA    LE G  +H  + + +     +VS+ L+DMY KCG +  
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQ 362

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACAS 470
           A   F+++     ++WN+++           A+ +F  M+ +  +P+ +T   +L  C+ 
Sbjct: 363 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 422

Query: 471 LAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWT 528
              +E G +  +     +G+       + ++D+  + G L  A+   + +P   +   W 
Sbjct: 423 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 482

Query: 529 IMIAGYGMHG 538
             +    +HG
Sbjct: 483 SFLGACRIHG 492



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 128/276 (46%), Gaps = 39/276 (14%)

Query: 43  HSSCTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTY 99
           +S C     +  + + + CK + ++ A I  + ++G  E+A+        E+  ID    
Sbjct: 151 YSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVL 210

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
           CS L  C  LK+ + G+ VHS + + G    D  +G+ L  M+   GD++    VF  ID
Sbjct: 211 CSTLGACGALKACKFGRSVHSSVVKLGFE-SDIFVGNALTDMYSKAGDMESASNVFG-ID 268

Query: 160 NG--KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------- 209
           +    V  +  L+  Y +T   ++ L +F +++  GI  + +TFS ++K  A        
Sbjct: 269 SECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQG 328

Query: 210 ------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                                   + G    ++ A + FDE+ D   ++WN ++S +  +
Sbjct: 329 TQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQH 388

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           G+ +  +++F+ M++ G   +  T +++L+GC++ G
Sbjct: 389 GLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 424


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/703 (35%), Positives = 388/703 (55%), Gaps = 39/703 (5%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           F   G +   R +F+ + +  V  WN ++  Y       E+  LF KM      + +   
Sbjct: 26  FARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLV 85

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
           S  +K       +  + +A K+FD++ +R+VVSW  M+ GY+  G+ ++   +F  M   
Sbjct: 86  SGYVK-------NGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPE- 137

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               ++ +   +L G    G +   R +          K++  +  ++      G L  A
Sbjct: 138 ---KNVVSWTVMLGGLIEDGRVDEARRL----FDMIPVKDVVASTNMIGGLCSEGRLSEA 190

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT--SILHACA 379
             +F++M +R+VV+WTSMI+GYA     D A +LF  M      PD   +T  ++L    
Sbjct: 191 REIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVM------PDKNEVTWTAMLKGYT 244

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
             G +    ++   +    + +     N ++  +   G +  A  VF+QM  KD  +W+ 
Sbjct: 245 RSGRINEAAELFKAMPVKPVAAC----NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSA 300

Query: 440 MIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           +I           AL LF  M  +   P+  ++  IL  C SLA+L+ GR++H  ++R  
Sbjct: 301 LIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSH 360

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
              D  V++ ++ MY+KCG LV  + +FD   +KD++ W  +IAGY  HGFG  A+  F+
Sbjct: 361 FDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFH 420

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
           +M  +G  PDE++FI VL AC ++G V EG   F  M+ +  ++ K EHYACMVDLL R 
Sbjct: 421 EMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRA 480

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           G L+EA   IE MPV  DA +WG+LL  CR H  + LAE  A+ + +LEP + G Y+LL+
Sbjct: 481 GKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLS 540

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS-SHPHAKKIESLL 727
           N+YA   +W++V +LR+ +  R + K+PGCSWIE+  KV++F  GGS SHP  + I   L
Sbjct: 541 NLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKL 600

Query: 728 KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNL 787
           ++L   ++  GY P   + + + DE +K  +L  HSEK+A+A+G+L +P G+ IRV KNL
Sbjct: 601 EKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNL 660

Query: 788 RVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           RVCGDCH   K +++   REI+LRD+NRFHHFKDG CSCR FW
Sbjct: 661 RVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 229/510 (44%), Gaps = 60/510 (11%)

Query: 69  EIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADL---KSLEDGKKVHSIICES 125
           +I  F  +G +++A  +        + +KT  S   + A     K   + +K+   + E 
Sbjct: 22  QISYFARLGQIDRARNIF-----DDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPER 76

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
             +  +G     LV  +V  G + E R+VF+K+    V  W  ++  Y + G   E+  L
Sbjct: 77  NTISWNG-----LVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELL 131

Query: 186 FKKMQSLGIAA---------------------DSYTFSCVLKCLAVVG---NSRRVKDAH 221
           F +M    + +                     D      V+    ++G   +  R+ +A 
Sbjct: 132 FWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAR 191

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           ++FDE+  R+VV+W  MISGY  N   +   ++F+ M     + +  T   +L G    G
Sbjct: 192 EIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP----DKNEVTWTAMLKGYTRSG 247

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            +    A   F  KA   K ++  N ++  +   G++  A  VF++M E+   +W+++I 
Sbjct: 248 RI--NEAAELF--KAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIK 303

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
            Y R+G    A+ LF  M REG+ P+  +I SIL  C     L+ G+ VH  +  +    
Sbjct: 304 IYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDL 363

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
            +YVS+ L+ MY KCG +   + VF++   KDIV WN++I           AL++F  M 
Sbjct: 364 DIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMF 423

Query: 452 QN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN--AIVDMYVKCGV 508
            +   PD +T   +L AC     ++ G EI    ++     D+   +   +VD+  + G 
Sbjct: 424 SSGAAPDEITFIGVLSACGYTGKVKEGLEIFES-MKSKYQVDQKTEHYACMVDLLGRAGK 482

Query: 509 LVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           L  A +L + +P + D I W  +++    H
Sbjct: 483 LNEAMNLIENMPVEADAIVWGALLSACRTH 512



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/342 (21%), Positives = 148/342 (43%), Gaps = 50/342 (14%)

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           ++ FS   +     +  +++ G +D A  +F+ +  ++V SW +++AGY        A +
Sbjct: 9   RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LF  M     E +  +   ++     +G++   + V D + E ++ S      +++  Y 
Sbjct: 69  LFDKMP----ERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVS----WTSMVRGYV 120

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAAL 474
           + G + +AE +F +MP K++VSW  M+G L            DG               +
Sbjct: 121 QEGLIDEAELLFWRMPEKNVVSWTVMLGGLI----------EDG--------------RV 156

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           +  R +   I    + A  N+   +       G L  AR +FD +P +++++WT MI+GY
Sbjct: 157 DEARRLFDMIPVKDVVASTNMIGGLCSE----GRLSEAREIFDEMPQRNVVAWTSMISGY 212

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
            M+    + +     + +   + +EV++ ++L   + SG ++E    F  M       P 
Sbjct: 213 AMN----NKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAM-------PV 261

Query: 595 LEHYAC--MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
               AC  M+      G + +A    + M    D T W +L+
Sbjct: 262 KPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGT-WSALI 302


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 271/803 (33%), Positives = 423/803 (52%), Gaps = 52/803 (6%)

Query: 77  GNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G +E+A+       K  +  +     +++ LC  L+    G +V + +  SG++    V 
Sbjct: 124 GCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVA 183

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ---- 190
            S L+ MF     +++  R+F++++      WN ++  YS    + +   +   M+    
Sbjct: 184 NS-LITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEV 242

Query: 191 --------------------SLGIAADSYTFSCVLKCLAVVGNSR--------RVKDAHK 222
                               +LG    S   S  L C   + N+         ++ +A  
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCG 281
           LF  +S RDV+SWN MIS Y+ +    + LE   ++L       +  T  + L  C++  
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
           ALM GR +HA  L+      +   N+LL MYSKC  ++   RVFE M    VVS   +  
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG-LLEIGKDVHDYIKENDMQ 400
           GYA       A+R+F  M   GI+P+   + ++   C   G L   G  +H Y+ +  + 
Sbjct: 423 GYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFV-A 449
           S  Y++N+L+ MYA CG +  +  +F+++  K ++SWN +I A          + LF+ +
Sbjct: 483 SDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDS 542

Query: 450 MLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
                + D   +A  L + A+LA+LE G ++HG  +++G+  D +V NA +DMY KCG +
Sbjct: 543 QHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKM 602

Query: 510 -VLARSLFDMIPA-KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
             + ++L D  PA +    W  +I+GY  +G+  +A  TF  M   G +PD V+F+++L 
Sbjct: 603 DCMLKTLPD--PAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLS 660

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSH+GL+D+G  ++N M     + P ++H  C+VDLL R G  +EA +FI+ MPV P+ 
Sbjct: 661 ACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPND 720

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            IW SLL   R H  + +  K A+++ EL+P +   YVLL+N+YA   +W +V KLR  +
Sbjct: 721 LIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHM 780

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
               L K P CSW+++K +V+ F  G  SH HA+KI   L  + L+++  GY   T  AL
Sbjct: 781 KTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSAL 840

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
            + DE +KE  L  HSEKLA+A+G+L +P G TIR+ KNLRVC DCH + K +S    RE
Sbjct: 841 HDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHRE 900

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           IVLRD  RFH FK G CSC  FW
Sbjct: 901 IVLRDPYRFHQFKHGSCSCSDFW 923



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 193/378 (51%), Gaps = 12/378 (3%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           L + G+   V +A +LF E+  R+VVSW  ++    +NG  E+ L  ++ M   G   + 
Sbjct: 86  LHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNA 145

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
             + TV+S C      + G  V A  + +     +S  N+L+ M+     +  A R+F++
Sbjct: 146 NALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDR 205

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M ER  +SW +MI+ Y+ E V+     +   M    ++PDV  + S++  CA   L+ +G
Sbjct: 206 MEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALG 265

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
             +H     + +  S+ + NAL++MY+  G + +AES+F  M  +D++SWNTMI      
Sbjct: 266 SGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQS 325

Query: 443 -----ALDLFVAMLQNFE--PDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                AL+    +LQ  E  P+ +T +  L AC+S  AL  GR IH  IL+  +     +
Sbjct: 326 NSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLI 385

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            N+++ MY KC  +     +F+ +P  D++S  ++  GY       +A+  F+ MR  GI
Sbjct: 386 GNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGI 445

Query: 556 EPDEVSFISVLYACSHSG 573
           +P+ ++ I++   C   G
Sbjct: 446 KPNYITMINLQGTCKSLG 463



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 190/414 (45%), Gaps = 22/414 (5%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG---AL 283
           +  R   SW   +SG    G+      + + M      +    + ++++ C + G     
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G A+HA   +A     +     LL +Y   G +  A R+F +M +R+VVSWT+++   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE---IGKDVHDYIKENDMQ 400
           +  G  + A+  +R M +EG+  +  A+ +++  C   G LE    G  V  ++  + + 
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLC---GALEDEVAGLQVTAHVVVSGLL 177

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD-------LFVAMLQ- 452
           + + V+N+L+ M+     + DAE +F++M  +D +SWN MI            F+ +   
Sbjct: 178 THVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM 237

Query: 453 ---NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
                +PD  T+  ++  CAS   +  G  IH   +  G+     + NA+V+MY   G L
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI-EPDEVSFISVLYA 568
             A SLF  +  +D+ISW  MI+ Y       +A+ T   + Q     P+ ++F S L A
Sbjct: 298 DEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGA 357

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           CS    +  G R  + M  + +++  L     ++ + S+  ++ +  R  E MP
Sbjct: 358 CSSPEALMNG-RTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMP 410


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/649 (36%), Positives = 377/649 (58%), Gaps = 24/649 (3%)

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
           D++  S + K   V+    RV  A K+FD +   D V WN +++G   +    + +E F 
Sbjct: 148 DTFVASALAKLYFVLS---RVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFA 200

Query: 257 EMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
            M+  G    D  T+ +VL   A    +  GR VH+FA K   ++       L+ +YSKC
Sbjct: 201 RMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKC 260

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           GD++ A  +F+ M +  +V++ ++I+GY+  G+   ++ LF  ++  G+ P+   + +++
Sbjct: 261 GDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALI 320

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
              +  G   + + +H ++ ++   ++  VS A+  ++ +   M  A   F+ MP K + 
Sbjct: 321 PVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTME 380

Query: 436 SWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYI 484
           SWN MI           A+ LF  M++ N  P+ +T++  L ACA L AL  G+ +H  I
Sbjct: 381 SWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRII 440

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
               +  +  V  A++DMY KCG +  AR +F+ +  K+++SW  MIAGYG+HG G +A+
Sbjct: 441 TEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEAL 500

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
             + DM  A + P   +F+SVLYACSH GLV+EGW+ F  M  +  I P +EH  CMVDL
Sbjct: 501 KLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDL 560

Query: 605 LSRTGNLSEAYRFIEMMP---VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNT 661
           L R G L EA+  I   P   V P   +WG+LL  C +H +  LA+  ++ +FEL+P+N+
Sbjct: 561 LGRAGQLKEAFELISEFPKSAVGPG--VWGALLGACMVHKDSDLAKLASQKLFELDPENS 618

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK 721
           GYYVLL+N++   +++ E   +R++   R L K PG + IEI  K ++F+AG  +HP ++
Sbjct: 619 GYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSE 678

Query: 722 KIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
            I S L++L  +M   GY P+T  AL + +E EKE  +  HSEKLA+AFG+L+   G  I
Sbjct: 679 AIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEI 738

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           R+ KNLRVC DCH   KF+SK  +R IV+RD++RFHHF+DG CSC  +W
Sbjct: 739 RIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 210/439 (47%), Gaps = 57/439 (12%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D  + S L  ++     +   R+VF+ + +    +WN L+   S +    E++  F +M 
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMV 203

Query: 191 SLG-IAADSYTFSCVLKCLAVVGNSRR--------------------------------V 217
             G +  D+ T + VL   A V +                                   V
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           + A  LFD +   D+V++N +ISGY  NG+    + +F E++ LG   + +T+V ++   
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           +  G  +  + +H F LK+ F+     +  +  ++ +  D++ A + F+ M E+++ SW 
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           +MI+GYA+ G+ + A+ LF  MV+  + P+   I+S L ACA  G L +GK +H  I E 
Sbjct: 384 AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEE 443

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
           D++ ++YV  AL+DMYAKCGS+++A  +FN M  K++VSWN MI           AL L+
Sbjct: 444 DLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLY 503

Query: 448 VAMLQ-NFEPDGVTMACILPACASLAALERGREI-----HGYILRHGISADRNVANAIVD 501
             ML  +  P   T   +L AC+    +E G ++       Y +  GI         +VD
Sbjct: 504 KDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEH----CTCMVD 559

Query: 502 MYVKCGVLVLARSLFDMIP 520
           +  + G L  A  L    P
Sbjct: 560 LLGRAGQLKEAFELISEFP 578



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 188/386 (48%), Gaps = 36/386 (9%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T  S+L   A++  +  G+ VHS   + G+   + VL + L+ ++  CGD++  R
Sbjct: 209 RPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVL-TGLISLYSKCGDVESAR 267

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------- 205
            +F+ ++   +  +N L+  YS  G    S+ LF ++ +LG+  +S T   ++       
Sbjct: 268 CLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFG 327

Query: 206 -----KCL-------AVVGNSR----------RVKD---AHKLFDELSDRDVVSWNCMIS 240
                +CL           NS           R+ D   A K FD + ++ + SWN MIS
Sbjct: 328 HDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMIS 387

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY  NG+ E  + +F++M+ L    +  T+ + LS CA  GAL  G+ +H    +     
Sbjct: 388 GYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEP 447

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            +     L+DMY+KCG +  A R+F  M  ++VVSW +MIAGY   G    A++L++ M+
Sbjct: 448 NVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDML 507

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSM 419
              + P      S+L+AC+  GL+E G  V   + ++  +   +     ++D+  + G +
Sbjct: 508 DAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQL 567

Query: 420 ADAESVFNQMPVKDIVS--WNTMIGA 443
            +A  + ++ P   +    W  ++GA
Sbjct: 568 KEAFELISEFPKSAVGPGVWGALLGA 593



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 11/201 (5%)

Query: 64  KNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSI 121
           +++NA I  + + G  E A+ +     K  +  +  T  S L  CA L +L  GK +H I
Sbjct: 380 ESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRI 439

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I E  +  +  V+ + L+ M+  CG + E RR+FN +DN  V  WN ++  Y   G   E
Sbjct: 440 ITEEDLEPNVYVM-TALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAE 498

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSW-----N 236
           +L L+K M    +   S TF   L  L    +   V++  K+F  ++D   ++       
Sbjct: 499 ALKLYKDMLDAHLLPTSATF---LSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCT 555

Query: 237 CMISGYIANGVAEKGLEVFKE 257
           CM+      G  ++  E+  E
Sbjct: 556 CMVDLLGRAGQLKEAFELISE 576



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 20/227 (8%)

Query: 425 VFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAAL---------- 474
           +F   P  D    N ++ +L      L    PD  + A    A  SLAAL          
Sbjct: 74  LFRGFPRPDRFLRNALLRSLPSLRPRLLFPCPDSFSFAF---AATSLAALCSRGGGAASS 130

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
              R +H   +  G +AD  VA+A+  +Y     +  AR +FD +P+ D + W  ++AG 
Sbjct: 131 SAARALHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGL 190

Query: 535 GMHGFGCDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
                G +A+ +F  M   G + PD  +  SVL A +    V  G R  +    +C +  
Sbjct: 191 S----GSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMG-RCVHSFAEKCGLAE 245

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
                  ++ L S+ G++  A    +MM   PD   + +L+ G  ++
Sbjct: 246 HEHVLTGLISLYSKCGDVESARCLFDMME-KPDLVAYNALISGYSVN 291


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 276/803 (34%), Positives = 411/803 (51%), Gaps = 84/803 (10%)

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFM---FVTCGDLKEGRRVFNKI-----DNG 161
           K+L   K++H  I ++G+      L +KLV       +   L   R+ F         + 
Sbjct: 36  KTLNQLKQLHCQITKNGLDQIPSTL-TKLVNAGAEIASPESLDYARKAFELFKEDVRSDD 94

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK--------CLAVVGN 213
            +F+ N L+  YS  G  +E++ L+ +M  LG+  + YTF  VL         C  +  +
Sbjct: 95  ALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVH 154

Query: 214 SRRVK------------------------DAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
              VK                          HK+F+ +S+R+VVSW  +I GY      +
Sbjct: 155 GSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPK 214

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + + +F EM+  G      TMV V+S CA    L  G  V A+  +          N L+
Sbjct: 215 EAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALV 274

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           DMY KCG +D A R+F++  +R++V + ++++ YAR+G+   A+ +   M+++G  PD  
Sbjct: 275 DMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRV 334

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG--SMA------- 420
            + S + A A    L  GK  H Y+  N ++    + N ++DMY KCG   MA       
Sbjct: 335 TMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLM 394

Query: 421 -------------------DAES---VFNQMPVKDIVSWNTMIG----------ALDLFV 448
                              D ES   VFNQ+P ++ V WNTMI           A++LF 
Sbjct: 395 SNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFR 454

Query: 449 AML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            M  +  + D VTM  I  AC  L A E  + +H YI ++GI  D  +  A+VDM+ +CG
Sbjct: 455 EMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCG 514

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
               A  +F+ +  +D+ +WT  I    M G G  A   FN M   G++PD V F+ VL 
Sbjct: 515 DPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLT 574

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSH G V++G   F++M  +  I P++EHY CMVDLL R G L EA+  I+ MP+ P+ 
Sbjct: 575 ACSHGGQVEQGLHIFSLME-DHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPND 633

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            +WGSLL  CR+H  V++A   AE + EL P   G +VLL+N+YA A KW +V ++R  +
Sbjct: 634 VVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNL 693

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
             +G++K PG S +++ G ++ F +G  SHP    I  +L+ +       G+ P     L
Sbjct: 694 REKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVL 753

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
           ++ DE EKE  L  HSEKLA+AFG++       IRV KNLR+C DCH  AK  S    RE
Sbjct: 754 LDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNRE 813

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           I++RD+NRFH F+ G CSC  +W
Sbjct: 814 IIVRDNNRFHFFRQGLCSCCDYW 836



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  I    +    E A+E+      E  K D  T   I   C  L + E  K VH+ I 
Sbjct: 433 WNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIE 492

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           ++GI   D  L + LV MF  CGD +   +VFNK+    V  W   +   +  GN + + 
Sbjct: 493 KNGIPC-DMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGAT 551

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS----WNCMI 239
            LF +M   G+  D   F   ++ L    +  +V+    +F  + D  +      + CM+
Sbjct: 552 GLFNQMLIQGVKPDVVLF---VQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMV 608

Query: 240 SGYIANGVAEKGLEVFKEM 258
                 G+  +  ++ K M
Sbjct: 609 DLLGRAGLLREAFDLIKSM 627


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/691 (36%), Positives = 392/691 (56%), Gaps = 47/691 (6%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +DT+    +L+ C + KSL+ GK +H  +   G+  +D  L   L+ ++++C      + 
Sbjct: 1   MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQ-NDIFLCKNLINLYLSCHLYDHAKC 59

Query: 154 VFNKIDNG-KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLK----- 206
           VF+ ++N  ++ +WN LM  Y+K   + E+L LF+K+     +  DSYT+  VLK     
Sbjct: 60  VFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGL 119

Query: 207 -----------CLA--------VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMI 239
                      CL         VVG+S           + A  LF+E+ ++DV  WN +I
Sbjct: 120 YKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVI 179

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           S Y  +G  ++ LE F  M   GF  +  T+ T +S CA    L  G  +H   + + F 
Sbjct: 180 SCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFL 239

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +   ++ L+DMY KCG L+ AI VFE+M +++VV+W SMI+GY  +G     I+LF+ M
Sbjct: 240 LDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRM 299

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             EG++P +  ++S++  C+    L  GK VH Y   N +QS ++++++LMD+Y KCG +
Sbjct: 300 YNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKV 359

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNF-EPDGVTMACILPAC 468
             AE++F  +P   +VSWN MI           AL LF  M +++ EPD +T   +L AC
Sbjct: 360 ELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTAC 419

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           + LAALE+G EIH  I+   +  +  V  A++DMY KCG +  A S+F  +P +DL+SWT
Sbjct: 420 SQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWT 479

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI  YG HG    A+  F +M Q+ ++PD V+F+++L AC H+GLVDEG  +FN M   
Sbjct: 480 SMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNV 539

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP-VAPDATIWGSLLCGCRIHHEVKLAE 647
             I P++EHY+C++DLL R G L EAY  ++  P +  D  +  +L   CR+H  + L  
Sbjct: 540 YGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGA 599

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
           ++A  + + +PD++  Y+LL+N+YA A KW+EV+ +R K+   GLKKNPGCSWIEI  K+
Sbjct: 600 EIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKI 659

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
             F    +SH H + +   L  L   M+ E 
Sbjct: 660 LPFFVEDNSHLHLELVFKCLSYLSDHMEDES 690



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 172/587 (29%), Positives = 285/587 (48%), Gaps = 73/587 (12%)

Query: 43  HSSCTI----NPISASISKTLVC-KTKNYNAEIGRFCEVGNL-EKAMEVLYSSEKSKIDT 96
           H+ C      NP   S+   L+   TKNY      + E   L EK +   Y     K D+
Sbjct: 56  HAKCVFDNMENPCEISLWNGLMAGYTKNY-----MYVEALELFEKLLHYPYL----KPDS 106

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
            TY S+L+ C  L     GK +H+ + ++G+++D  V+GS LV M+  C   ++   +FN
Sbjct: 107 YTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDI-VVGSSLVGMYAKCNAFEKAIWLFN 165

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           ++    V  WN ++  Y ++GNFKE+L  F  M+  G   +S T +  +   A + +  R
Sbjct: 166 EMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNR 225

Query: 217 VKDAH--------------------------------KLFDELSDRDVVSWNCMISGYIA 244
             + H                                ++F+++  + VV+WN MISGY  
Sbjct: 226 GMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGL 285

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G +   +++FK M N G    L T+ +++  C+    L+ G+ VH + ++     ++  
Sbjct: 286 KGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFI 345

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
           N++L+D+Y KCG ++ A  +F+ + +  VVSW  MI+GY  EG    A+ LF  M +  +
Sbjct: 346 NSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYV 405

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           EPD    TS+L AC+    LE G+++H+ I E  + ++  V  AL+DMYAKCG++ +A S
Sbjct: 406 EPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFS 465

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAA 473
           VF  +P +D+VSW +MI           AL+LF  MLQ N +PD VT   IL AC     
Sbjct: 466 VFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGL 525

Query: 474 LERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA--KDLISWTIM 530
           ++ G      ++  +GI       + ++D+  + G L  A  +    P    D+   + +
Sbjct: 526 VDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTL 585

Query: 531 IAGYGMH---GFGCDAIATFNDMRQAGIEPDEVS---FISVLYACSH 571
            +   +H     G +   T  D      +PD+ S    +S +YA +H
Sbjct: 586 FSACRLHRNIDLGAEIARTLIDK-----DPDDSSTYILLSNMYASAH 627


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/605 (38%), Positives = 355/605 (58%), Gaps = 12/605 (1%)

Query: 238 MISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
           MISG++ N   E  + VF +M L  G   DL T++ VL   A    L  G  +   A+K 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            F   +S    L+ ++SKCG+++ A  +F ++ ++ ++S  +MI+G+   G  + ++RLF
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
           + ++  G       I  ++   +  G   +   +H +  +  + S   VS AL  +Y + 
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 417 GSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACIL 465
             M  A  +F++   K + SWN MI           A+ LF  M +N   P+ VT+  IL
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
            ACA + AL  G  +H  I  +   ++  V+ A++DMY KCG + +AR LFD++P K+ +
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEV 300

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           +W  MI+GYG+HG G +A+  F DM  + ++P  ++F+SVLYACSH+GLV EG   F+ M
Sbjct: 301 TWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTM 360

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
            ++   EP  EHYACMVD+L R G L +A  FI+ MPV P   +WG+LL  C IH +  L
Sbjct: 361 VHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNL 420

Query: 646 AEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
           A   +E +FEL+P+N GYYVL++N+Y+   K+ +   +R+   ++ L K PGC+ IEI  
Sbjct: 421 AHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQ 480

Query: 706 KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEK 765
             ++F +G  SHP +K I + L +L  +M   G+  +T   L + +E EKE+ +  HSEK
Sbjct: 481 VPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEK 540

Query: 766 LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCS 825
           LA+AFG+++   G  IR+ KNLRVC DCH   KF+SK  +R IV+RD+NRFHHFKDG CS
Sbjct: 541 LAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCS 600

Query: 826 CRGFW 830
           C  +W
Sbjct: 601 CGDYW 605



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 197/396 (49%), Gaps = 16/396 (4%)

Query: 142 FVTCGDLKEGRRVFNK--IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSY 199
           FV     ++  RVF    + NG  F    ++         +E L L  ++  L I    Y
Sbjct: 5   FVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQE-LKLGMQILCLAIKCGFY 63

Query: 200 TFSCVLKCL-AVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
           +   +L  L ++      V+ A  LF E+  +D++S N MISG+  NG  E  + +FKE+
Sbjct: 64  SHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKEL 123

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
           L+ G  V  +T+V ++   +  G       +H F +K       S +  L  +Y +  ++
Sbjct: 124 LSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEM 183

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
             A ++F++  E+++ SW +MI+G  + G+ D AI LF+ M +  + P+   +TSIL AC
Sbjct: 184 IFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSAC 243

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
           A  G L +G+ VH  IK N  +S++YVS AL+DMYAKCGS+  A  +F+ MP K+ V+WN
Sbjct: 244 AQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWN 303

Query: 439 TMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREI-HGYILR 486
            MI           AL LF  ML  + +P G+T   +L AC+    ++ G  I H  +  
Sbjct: 304 AMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHD 363

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            G          +VD+  + G L  A      +P +
Sbjct: 364 FGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVE 399



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 182/385 (47%), Gaps = 35/385 (9%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T  ++L   A+L+ L+ G ++  +  + G      +L + L+ +F  CG+++  R
Sbjct: 28  RFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLL-TGLISLFSKCGEVEIAR 86

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            +F +I    +   N ++  ++  G  ++S+ LFK++ S G    S T   ++   +  G
Sbjct: 87  LLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFG 146

Query: 213 NSR-----------------------------RVKD---AHKLFDELSDRDVVSWNCMIS 240
           +S                              R+ +   A +LFDE +++ + SWN MIS
Sbjct: 147 HSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMIS 206

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G   NG+ +  + +F+ M     N +  T+ ++LS CA  GAL  G  VH+      F  
Sbjct: 207 GCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFES 266

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            +  +  L+DMY+KCG +  A  +F+ M E++ V+W +MI+GY   G    A++LF  M+
Sbjct: 267 NVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDML 326

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDV-HDYIKENDMQSSLYVSNALMDMYAKCGSM 419
              ++P      S+L+AC+  GL++ G  + H  + +   +        ++D+  + G +
Sbjct: 327 SSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQL 386

Query: 420 ADAESVFNQMPVKD-IVSWNTMIGA 443
             A      MPV+     W  ++GA
Sbjct: 387 KKALEFIKAMPVEPGPPVWGALLGA 411



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 15/212 (7%)

Query: 54  SISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKS 111
           S  KTL     ++NA I    + G  + A+ +  + +K+ ++    T  SIL  CA + +
Sbjct: 193 SAEKTLA----SWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGA 248

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           L  G+ VHS+I +S     +  + + L+ M+  CG +   R +F+ +       WN ++ 
Sbjct: 249 LSLGEWVHSLI-KSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMIS 307

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS--- 228
            Y   G+ +E+L LF  M S  +     TF  VL   +  G    VK+   +F  +    
Sbjct: 308 GYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAG---LVKEGDGIFHTMVHDF 364

Query: 229 --DRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
             +     + CM+      G  +K LE  K M
Sbjct: 365 GFEPLAEHYACMVDILGRAGQLKKALEFIKAM 396


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 285/854 (33%), Positives = 447/854 (52%), Gaps = 61/854 (7%)

Query: 36   IIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKID 95
            +++S  S  S +I+       +     +  +N+ I  +C  G+   A ++    +   ++
Sbjct: 283  VLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVE 342

Query: 96   TK------TYCSILQLCADLKS--LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
                    T CS++     L    L   +++ + I +SG  + D  +GS LV  F   G 
Sbjct: 343  LNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGF-LRDLYVGSALVNGFARYGL 401

Query: 148  LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL--------------- 192
            +   + +F ++ +      N LM   ++    +E+  +FK+M+ L               
Sbjct: 402  MDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTF 461

Query: 193  ------------GIAADSYTF-SCVLKCLAVVGNS--------RRVKDAHKLFDELSDRD 231
                        G    +Y F S ++     +GN+          + +A  +F  +  +D
Sbjct: 462  TEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKD 521

Query: 232  VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
             VSWN MISG   N   E+ +  F  M   G      ++++ LS C++ G L  GR +H 
Sbjct: 522  TVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHG 581

Query: 292  FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR-EGVFD 350
               K     ++S +N LL +Y++   ++   +VF +M E   VSW S I   A+ E    
Sbjct: 582  EGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVL 641

Query: 351  GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
             A++ F  M++ G  P+     +IL A +   +L +G  +H  I +  +     + NAL+
Sbjct: 642  QALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALL 701

Query: 411  DMYAKCGSMADAESVFNQMP-VKDIVSWNTMIG----------ALDLFVAMLQNFEP-DG 458
              Y KC  M D E +F++M   +D VSWN+MI           A+DL   M+Q  +  DG
Sbjct: 702  AFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDG 761

Query: 459  VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
             T A +L ACAS+A LERG E+H   +R  + +D  V +A+VDMY KCG +  A   F++
Sbjct: 762  FTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFEL 821

Query: 519  IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
            +P +++ SW  MI+GY  HG G  A+  F  M+Q G  PD V+F+ VL ACSH GLVDEG
Sbjct: 822  MPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEG 881

Query: 579  WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG-C 637
            ++ F  M     + P++EH++CMVDLL R G++ +   FI+ MP+ P+  IW ++L   C
Sbjct: 882  YKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACC 941

Query: 638  RIH-HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
            R +    +L ++ A+ + ELEP N   YVLL+N++A    WE+V + R  + +  +KK+ 
Sbjct: 942  RANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDA 1001

Query: 697  GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
            GCSW+ +K  V++FVAG  +HP  +KI   LK L  +++  GY P+T+YAL + +   KE
Sbjct: 1002 GCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKE 1061

Query: 757  VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
              L  HSEKLA+AF +L   +   IR+ KNLRVCGDCH   K++SK   R+I+LRDSNRF
Sbjct: 1062 ELLSYHSEKLAIAF-VLTRKSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRF 1120

Query: 817  HHFKDGRCSCRGFW 830
            HHF  G CSC  +W
Sbjct: 1121 HHFGGGMCSCGDYW 1134



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 252/488 (51%), Gaps = 31/488 (6%)

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD 231
            Y  + +  ++ +L  ++   G   D +  + ++     +GN   +  A KLFDE+  ++
Sbjct: 149 RYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGN---LVSARKLFDEMPQKN 205

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA--LMFGRAV 289
           +VSW+C+ISGY  N + ++   +FK +++ G   +   + + L  C  CG+  +  G  +
Sbjct: 206 LVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQI 265

Query: 290 HAFALKACFSKEISFNNTLLDMYSKC-GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           HAF  K     ++  +N L+ MYS C G +D A RVF+++  R+ V+W S+I+ Y R G 
Sbjct: 266 HAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGD 325

Query: 349 FDGAIRLFRGMVREGIE----PDVYAITSILHACAC---DGLLEIGKDVHDYIKENDMQS 401
              A +LF  M  EG+E    P+ Y + S++ A AC   D  L + + +   I+++    
Sbjct: 326 AVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTA-ACSLADCGLVLLEQMLTRIEKSGFLR 384

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN-TMIG---------ALDLFVAML 451
            LYV +AL++ +A+ G M  A+ +F QM  ++ V+ N  M+G         A  +F  M 
Sbjct: 385 DLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK 444

Query: 452 QNFEPDGVTMACILPACASLAALE----RGREIHGYILRHGISADR-NVANAIVDMYVKC 506
              E +  ++  +L      + L+    +G+E+H Y+ R G+   R ++ NA+V+MY KC
Sbjct: 445 DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKC 504

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             +  A S+F ++P+KD +SW  MI+G   +    +A++ F+ M++ G+ P   S IS L
Sbjct: 505 TAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTL 564

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            +CS  G +  G R  +   ++  ++  +     ++ L + T +++E  +    MP   D
Sbjct: 565 SSCSSLGWLTLG-RQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYD 622

Query: 627 ATIWGSLL 634
              W S +
Sbjct: 623 QVSWNSFI 630



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 280/586 (47%), Gaps = 65/586 (11%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
           SL D   +H  + ++G   DD    + L+ ++V  G+L   R++F+++    +  W+ L+
Sbjct: 155 SLYDANHLHLQLYKTGFT-DDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSY------------------------TFSCVLK 206
             Y++     E+  LFK + S G+  + +                         F C L 
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLP 273

Query: 207 CLA--VVGN---------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
           C++  ++ N         S  + DAH++FDE+  R+ V+WN +IS Y   G A    ++F
Sbjct: 274 CVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLF 333

Query: 256 KEM------LNLGFN-VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
             M      LNL  N   L ++VT     A+CG ++  + +     K+ F +++   + L
Sbjct: 334 SVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIE-KSGFLRDLYVGSAL 392

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           ++ +++ G +D A  +F++M +R+ V+   ++ G AR+   + A ++F+ M ++ +E + 
Sbjct: 393 VNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINS 451

Query: 369 YAITSILHACACDGLLEIGK----DVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAE 423
            ++  +L        L+ GK    +VH Y+ +   + + + + NAL++MY KC ++ +A 
Sbjct: 452 ESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNAC 511

Query: 424 SVFNQMPVKDIVSWNTMIGALD----------LFVAMLQN-FEPDGVTMACILPACASLA 472
           SVF  MP KD VSWN+MI  LD           F  M +N   P   ++   L +C+SL 
Sbjct: 512 SVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLG 571

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
            L  GR+IHG   + G+  D +V+NA++ +Y +   +   + +F  +P  D +SW   I 
Sbjct: 572 WLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIG 631

Query: 533 GYGMHGFGC-DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM-MRYECN 590
               +      A+  F +M QAG  P+ V+FI++L A S   ++  G +   + ++Y   
Sbjct: 632 ALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVA 691

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            +  +E+   ++    +   + +       M    D   W S++ G
Sbjct: 692 DDNAIEN--ALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISG 735



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 193/386 (50%), Gaps = 28/386 (7%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H    K  F+ ++ F NTL+++Y + G+L  A ++F++M ++++VSW+ +I+GY +  +
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 221

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGL--LEIGKDVHDYIKENDMQSSLYVS 406
            D A  LF+G++  G+ P+ +A+ S L AC   G   +++G  +H +I +    S + +S
Sbjct: 222 PDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILS 281

Query: 407 NALMDMYAKC-GSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ--- 452
           N LM MY+ C GS+ DA  VF+++  ++ V+WN++I           A  LF  M     
Sbjct: 282 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 341

Query: 453 --NFEPDGVTMACILPACASLA--ALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
             N  P+  T+  ++ A  SLA   L    ++   I + G   D  V +A+V+ + + G+
Sbjct: 342 ELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGL 401

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +  A+ +F  +  ++ ++   ++ G      G +A   F +M+   +E +  S + +L  
Sbjct: 402 MDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLST 460

Query: 569 CSHSGLVDEGWR----FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
            +    + EG R        +     ++ ++     +V++  +   +  A    ++MP +
Sbjct: 461 FTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMP-S 519

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVA 650
            D   W S++ G  + H  +  E V+
Sbjct: 520 KDTVSWNSMISG--LDHNERFEEAVS 543


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/668 (37%), Positives = 384/668 (57%), Gaps = 30/668 (4%)

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
           YL K    L +   +Y      KC       R    A+K+FD + +R+VVSW+ ++SG++
Sbjct: 31  YLLKSGSGLNLITSNYLIDMYCKC-------REPLMAYKVFDSMPERNVVSWSALMSGHV 83

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            NG  +  L +F EM   G   +  T  T L  C    AL  G  +H F LK  F   + 
Sbjct: 84  LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N+L+DMYSKCG ++ A +VF ++ +RS++SW +MIAG+   G    A+  F GM++E 
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTF-GMMQEA 202

Query: 364 ---IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ--SSLYVSNALMDMYAKCGS 418
                PD + +TS+L AC+  G++  GK +H ++  +     SS  ++ +L+D+Y KCG 
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262

Query: 419 MADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPA 467
           +  A   F+Q+  K ++SW+++I           A+ LF  + + N + D   ++ I+  
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
            A  A L +G+++    ++     + +V N++VDMY+KCG++  A   F  +  KD+ISW
Sbjct: 323 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISW 382

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
           T++I GYG HG G  ++  F +M +  IEPDEV +++VL ACSHSG++ EG   F+ +  
Sbjct: 383 TVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
              I+P++EHYAC+VDLL R G L EA   I+ MP+ P+  IW +LL  CR+H +++L +
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 502

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
           +V + +  ++  N   YV+++N+Y +A  W E    RE  + +GLKK  G SW+EI+ +V
Sbjct: 503 EVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREV 562

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKRE-GYFPKTRYALINADEMEKEVALCGHSEK- 765
           + F +G  SHP    I+  LK     ++ E GY    ++ L + D+  KE  L  HSEK 
Sbjct: 563 HFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKL 622

Query: 766 ---LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
              LA+A G LN   G+TIRV KNLRVC DCHE  K +SK  +   V+RD+ RFH F+DG
Sbjct: 623 AIGLALATGGLN-QKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDG 681

Query: 823 RCSCRGFW 830
            CSC  +W
Sbjct: 682 CCSCGDYW 689



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 243/487 (49%), Gaps = 50/487 (10%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           SIL++C      + G +VH  + +SG  ++  +  + L+ M+  C +     +VF+ +  
Sbjct: 11  SILRVCTRKGLSDQGGQVHCYLLKSGSGLNL-ITSNYLIDMYCKCREPLMAYKVFDSMPE 69

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-------------- 206
             V  W+ LM  +   G+ K SL LF +M   GI  + +TFS  LK              
Sbjct: 70  RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129

Query: 207 ---CLAV-------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
              CL +       VGNS         R+ +A K+F  + DR ++SWN MI+G++  G  
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189

Query: 249 EKGLEVFKEM--LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF--SKEISF 304
            K L+ F  M   N+    D  T+ ++L  C++ G +  G+ +H F +++ F      + 
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
             +L+D+Y KCG L  A + F+++ E++++SW+S+I GYA+EG F  A+ LF+ +     
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           + D +A++SI+   A   LL  GK +     +        V N+++DMY KCG + +AE 
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEK 369

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAA 473
            F +M +KD++SW  +I           ++ +F  ML+ N EPD V    +L AC+    
Sbjct: 370 CFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429

Query: 474 LERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMI 531
           ++ G E+   +L  HGI         +VD+  + G L  A+ L D +P K  +  W  ++
Sbjct: 430 IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489

Query: 532 AGYGMHG 538
           +   +HG
Sbjct: 490 SLCRVHG 496



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 215/423 (50%), Gaps = 31/423 (7%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            +V++L  C   G    G  VH + LK+     +  +N L+DMY KC +   A +VF+ M
Sbjct: 8   NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            ER+VVSW+++++G+   G   G++ LF  M R+GI P+ +  ++ L AC     LE G 
Sbjct: 68  PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
            +H +  +   +  + V N+L+DMY+KCG + +AE VF ++  + ++SWN MI       
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187

Query: 443 ----ALDLFVAMLQNF----EPDGVTMACILPACASLAALERGREIHGYILRHGI--SAD 492
               ALD F  M+Q       PD  T+  +L AC+S   +  G++IHG+++R G    + 
Sbjct: 188 YGSKALDTF-GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             +  ++VD+YVKCG L  AR  FD I  K +ISW+ +I GY   G   +A+  F  +++
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA--CMVDLLSRTGN 610
              + D  +  S++   +   L+ +G +   M      +   LE      +VD+  + G 
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQ---MQALAVKLPSGLETSVLNSVVDMYLKCGL 363

Query: 611 LSEAYR-FIEMMPVAPDATIWGSLLCGCRIH----HEVKLAEKVAEHVFELEPDNTGYYV 665
           + EA + F EM     D   W  ++ G   H      V++  ++  H   +EPD   Y  
Sbjct: 364 VDEAEKCFAEMQ--LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH--NIEPDEVCYLA 419

Query: 666 LLA 668
           +L+
Sbjct: 420 VLS 422



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 162/393 (41%), Gaps = 77/393 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI----DTKTYCSILQLCADLKSLEDGKKVHS 120
           ++NA I  F   G   KA++     +++ I    D  T  S+L+ C+    +  GK++H 
Sbjct: 175 SWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234

Query: 121 IICESGI-VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
            +  SG        +   LV ++V CG L   R+ F++I    +  W+ L+  Y++ G F
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR----------------------- 216
            E++ LFK++Q L    DS+  S ++   A     R+                       
Sbjct: 295 VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSV 354

Query: 217 ---------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                    V +A K F E+  +DV+SW  +I+GY  +G+ +K + +F EML      D 
Sbjct: 355 VDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDE 414

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
              + VLS C++ G +  G  + +  L+       +     ++D+  + G L  A  + +
Sbjct: 415 VCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLID 474

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
            M                                   I+P+V    ++L  C   G +E+
Sbjct: 475 TM----------------------------------PIKPNVGIWQTLLSLCRVHGDIEL 500

Query: 387 GKDVHDYIKENDMQSSLYVSNALM--DMYAKCG 417
           GK+V   +   D ++    +N +M  ++Y + G
Sbjct: 501 GKEVGKILLRIDAKNP---ANYVMMSNLYGQAG 530


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/744 (34%), Positives = 393/744 (52%), Gaps = 92/744 (12%)

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
           DD  + + LV M V CG +    + F++I N  +   N ++  Y+K+     +L +FK  
Sbjct: 192 DDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFK-- 249

Query: 190 QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                                + +RDVVSWN +IS    +G   
Sbjct: 250 ------------------------------------SMPERDVVSWNMVISALSKSGRVR 273

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L++  +M   G   D  T  + L+ CA   +L +G+ +H   ++     +    + ++
Sbjct: 274 EALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMV 333

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           ++Y+KCG    A RVF  + +R+ VSWT +I G+ + G F  ++ LF  M  E +  D +
Sbjct: 334 ELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQF 393

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           A+ +++  C     + +G  +H    ++    ++ VSN+L+ MYAKCG++ +AE +FN M
Sbjct: 394 ALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFM 453

Query: 430 PVKDIVSW-------------------------------NTMIGA----------LDLFV 448
             +DIVSW                               N M+GA          L ++ 
Sbjct: 454 AERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYS 513

Query: 449 AML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
            ML  ++  PD VT   +   CA + A + G +I G+ ++ G+  D +V NA++ MY KC
Sbjct: 514 DMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKC 573

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G +  AR  FD +  KDL+SW  MI GY  HG G  AI  F+D+   G +PD +S+++VL
Sbjct: 574 GRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVL 633

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
             CSHSGLV+EG  +F+MM+ + NI P LEH++CMVDLL R G+L EA   I+ MP+ P 
Sbjct: 634 SGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPT 693

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
           A +WG+LL  C+ H    LAE  A+H+F+L+   +G Y+LLA +YA+A K ++  ++R+ 
Sbjct: 694 AEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKL 753

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +  +G+KK+PG SW+E+  +V++F A   SHP    I   L  L  ++   GY       
Sbjct: 754 MRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGY------- 806

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
            +  +    E+    HSEKLA+AFGI++LPA   I + KNLR+C DCH + K +S    R
Sbjct: 807 -VRTESPRSEIH---HSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDR 862

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           E V+RD  RFHHFK G CSC  +W
Sbjct: 863 EFVIRDGVRFHHFKGGSCSCMDYW 886



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 154/658 (23%), Positives = 274/658 (41%), Gaps = 133/658 (20%)

Query: 96  TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVF 155
           T+     L+ C    +L   + +HS +   G+      L + L+  +++CG L + R + 
Sbjct: 25  TQALADALRSCGARSALTGARTLHSRLINVGLA-SVVFLQNTLLHAYLSCGALSDARNLL 83

Query: 156 -NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
            ++I    V   N++M+ Y+K G+                                    
Sbjct: 84  RDEITEPNVITHNIMMNGYAKLGS------------------------------------ 107

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             + DA +LF  +  RDV SWN ++SGY  +G     L++F  M   G ++  A      
Sbjct: 108 --LSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTF--- 162

Query: 275 SGCA--NCGALMFGR-AVHAFALKACFSKE--ISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            GC   +CGAL +   A+    L + F  +        L+DM  +CG +D A + F ++ 
Sbjct: 163 -GCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIK 221

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGM--------------------VRE------- 362
             +++   SM+ GYA+    D A+ +F+ M                    VRE       
Sbjct: 222 NPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVD 281

Query: 363 ----GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
               G+ PD    TS L ACA    LE GK +H  +  N      YV++A++++YAKCG 
Sbjct: 282 MHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGC 341

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPA 467
             +A+ VF+ +  ++ VSW  +IG          +++LF  M       D   +A ++  
Sbjct: 342 FKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISG 401

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C +   +  G ++H   L+ G +    V+N+++ MY KCG L  A  +F+ +  +D++SW
Sbjct: 402 CCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSW 461

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
           T MI  Y   G    A   F+DM    +    +++ ++L A    G  ++G + ++ M  
Sbjct: 462 TGMITAYSQVGNIAKAREFFDDMSTRNV----ITWNAMLGAYIQHGAEEDGLKMYSDMLT 517

Query: 588 ECNIEPKLEHYACM-----------------------------------VDLLSRTGNLS 612
           E ++ P    Y  +                                   + + S+ G +S
Sbjct: 518 EKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRIS 577

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
           EA +  + +    D   W +++ G   H   K A ++ + +     +PD   Y  +L+
Sbjct: 578 EARKAFDFLS-RKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLS 634



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 215/447 (48%), Gaps = 69/447 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I    + G + +A++++       +  D+ TY S L  CA L SLE GK++H  +
Sbjct: 258 SWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQV 317

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +   ID  V  S +V ++  CG  KE +RVF+ + +     W +L+  + + G F ES
Sbjct: 318 IRNLPHIDPYV-ASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSES 376

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK--------CLA----------------VVGNSR--- 215
           + LF +M++  +A D +  + ++         CL                 VV NS    
Sbjct: 377 VELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISM 436

Query: 216 -----RVKDAHKLFDELSDRDVVS-------------------------------WNCMI 239
                 +++A  +F+ +++RD+VS                               WN M+
Sbjct: 437 YAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAML 496

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
             YI +G  E GL+++ +ML     + D  T VT+  GCA+ GA   G  +    +K   
Sbjct: 497 GAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGL 556

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             + S  N ++ MYSKCG +  A + F+ +  + +VSW +MI GY++ G+   AI +F  
Sbjct: 557 ILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDD 616

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCG 417
           ++ +G +PD  +  ++L  C+  GL+E GK   D +K ++++   L   + ++D+  + G
Sbjct: 617 ILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAG 676

Query: 418 SMADAESVFNQMPVKDIVS-WNTMIGA 443
            + +A+++ ++MP+K     W  ++ A
Sbjct: 677 HLIEAKNLIDEMPMKPTAEVWGALLSA 703


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/584 (40%), Positives = 335/584 (57%), Gaps = 46/584 (7%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +HA   +         N  L   Y+  G LD ++ +F +    SV  WT++I G+A  G+
Sbjct: 49  IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGL 108

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
            + A+  +  M+ +G+EP+ +  +SIL  C     +E GK +H    +    S LYV   
Sbjct: 109 HEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTG 164

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVS-------------------------------W 437
           L+D+YA+ G +  A+ +F+ MP K +VS                               W
Sbjct: 165 LLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCW 224

Query: 438 NTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR 486
           N MI           AL LF  ML+   +P+ VT+  +L AC  L ALE GR +H YI  
Sbjct: 225 NVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN 284

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
           +GI  + +V  A+VDMY KCG L  AR +FD I  KD+++W  MI GY MHGF  +A+  
Sbjct: 285 NGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQL 344

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
           F  M + G+ P  ++FI +L AC HSG V EGW  FN M+ E  IEPK+EHY CMV+LL 
Sbjct: 345 FKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLG 404

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVL 666
           R G++ +AY  ++ M + PD  +WG+LL  CR+H ++ L EK+ E + +    N+G Y+L
Sbjct: 405 RAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYIL 464

Query: 667 LANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESL 726
           L+N+YA    W+ V +LR  +   G+KK PGCS IE+  KV+ F+AGG +HP  K+I  +
Sbjct: 465 LSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMM 524

Query: 727 LKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKN 786
           L+ +   +K  GY P+T   L +  E EKE +L  HSEKLA+AFG++N   G TI++ KN
Sbjct: 525 LEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKN 584

Query: 787 LRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LRVC DCHE+ K +SK   R+IV+RD NRFHHF +G CSC  +W
Sbjct: 585 LRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 177/398 (44%), Gaps = 62/398 (15%)

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLL 169
           K++    ++H+++   G+     +L  KL   + + G L     +F +  N  VF W  +
Sbjct: 41  KTISHLLQIHAVLFRHGL-DHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAI 99

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK----------------------- 206
           +H ++  G  +++L  + +M + G+  +++TFS +LK                       
Sbjct: 100 IHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDL 159

Query: 207 -----CLAVVGNSRRVKDAHKLFDELS-------------------------------DR 230
                 L V      V  A +LFD +                                +R
Sbjct: 160 YVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEER 219

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           D V WN MI GY  NG+  + L +F+ ML      +  T+++VLS C   GAL  GR VH
Sbjct: 220 DGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVH 279

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
           ++         +     L+DMYSKCG L+ A  VF+K+ ++ VV+W SMI GYA  G   
Sbjct: 280 SYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQ 339

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNAL 409
            A++LF+ M R G+ P       IL AC   G +  G D+ + +K E  ++  +     +
Sbjct: 340 EALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCM 399

Query: 410 MDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
           +++  + G +  A  +   M ++ D V W T++GA  L
Sbjct: 400 VNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRL 437



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 176/360 (48%), Gaps = 48/360 (13%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           LF    +  V  W  +I G+   G+ E+ L  + +ML  G   +  T  ++L  C     
Sbjct: 84  LFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP---- 139

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           +  G+A+H+ A+K  F  ++     LLD+Y++ GD+  A ++F+ M E+S+VS T+M+  
Sbjct: 140 IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTC 199

Query: 343 YAREG-------VFDG------------------------AIRLFRGMVREGIEPDVYAI 371
           YA+ G       +FDG                        A+ LFR M++   +P+   +
Sbjct: 200 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 259

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            S+L AC   G LE G+ VH YI+ N +Q +++V  AL+DMY+KCGS+ DA  VF+++  
Sbjct: 260 LSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD 319

Query: 432 KDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           KD+V+WN+MI           AL LF +M +    P  +T   IL AC     +  G +I
Sbjct: 320 KDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI 379

Query: 481 HGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMHG 538
              +   +GI         +V++  + G +  A  L  +M    D + W  ++    +HG
Sbjct: 380 FNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 439



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 17/276 (6%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +N  I  + + G   +A+ VL+      K+K +  T  S+L  C  L +LE G+ VHS I
Sbjct: 224 WNVMIDGYTQNGMPNEAL-VLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 282

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +GI  +  V G+ LV M+  CG L++ R VF+KID+  V  WN ++  Y+  G  +E+
Sbjct: 283 ENNGIQFNVHV-GTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEA 341

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSWNC 237
           L LFK M  +G+   + TF   +  L+  G+S  V +   +F+++ D       +  + C
Sbjct: 342 LQLFKSMCRMGLHPTNITF---IGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGC 398

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M++     G  E+  E+ K   N+    D     T+L  C   G +  G  +    +   
Sbjct: 399 MVNLLGRAGHVEQAYELVK---NMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQN 455

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
            +   ++   L ++Y+  G+ DG  R+   M +  V
Sbjct: 456 LANSGTY-ILLSNIYAAVGNWDGVARLRTMMKDSGV 490


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/652 (36%), Positives = 374/652 (57%), Gaps = 44/652 (6%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +F+ + + +++ WN M  G+  +      L+++  M++LG   +  T   +L  CA   A
Sbjct: 19  VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
              G  +H   LK  +  ++  + +L+ MY +   L+ A +VF++   R VVS+T+++ G
Sbjct: 79  SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138

Query: 343 YAREG-------VFD------------------------GAIRLFRGMVREGIEPDVYAI 371
           YA  G       +FD                         A+ LF+ M++  + PD   +
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            +++ A A  G +E+G+ VH +I ++   S+L + NAL+D Y+KCG M  A  +F  +  
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY 258

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREI 480
           KD++SWN +IG          AL LF  ML++ E P+ VTM  IL ACA L A++ GR I
Sbjct: 259 KDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWI 318

Query: 481 HGYILRH--GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           H YI +   G++   ++  +++DMY KCG +  A  +F+ +  K L +W  MI G+ MHG
Sbjct: 319 HVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHG 378

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
               A   F+ MR+  I+PD+++F+ +L ACSH+G++D G   F  M +   I PKLEHY
Sbjct: 379 RANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHY 438

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
            CM+DLL  +G   EA   I  M + PD  IW SLL  C++H  V+L EK A+++F++EP
Sbjct: 439 GCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEP 498

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
           +N G YVLL+N+YA A +W EV ++R  ++ +G+KK PGCS IEI   V+ F+ G   HP
Sbjct: 499 NNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 558

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
             ++I  +L+ + + ++  G+ P T   L   +E  KE AL  HSEKLA+AFG+++    
Sbjct: 559 RNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLISTKPE 618

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             + + KNLRVC +CHE  K +SK  +REI+ RD  RFHHF+DG CSC  +W
Sbjct: 619 TKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 226/463 (48%), Gaps = 62/463 (13%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T+  +L+ CA LK+ ++G ++H  + + G  +D  V  S L+ M+V    L++  +V
Sbjct: 62  NSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTS-LISMYVQNERLEDAHKV 120

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F++  +  V  +  L+  Y+  G                                     
Sbjct: 121 FDRSSHRDVVSYTALVTGYASRG------------------------------------- 143

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             ++ A  +FDE+  +DVVSWN MISGY+  G  ++ LE+FKEM+      D +TMVTV+
Sbjct: 144 -YIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVI 202

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S  A  G++  GR VH++     F   +   N L+D YSKCG+++ A  +F  +  + V+
Sbjct: 203 SASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVI 262

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW  +I GY    ++  A+ LF+ M+R G  P+   + SILHACA  G ++IG+ +H YI
Sbjct: 263 SWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYI 322

Query: 395 KE--NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------G 442
            +    + ++  +  +L+DMY+KCG +  A  VFN M  K + +WN MI           
Sbjct: 323 DKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANA 382

Query: 443 ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI-----HGYILRHGISADRNVA 496
           A D+F  M +N  +PD +T   +L AC+    L+ GR I     H Y     I+      
Sbjct: 383 AFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNY----KITPKLEHY 438

Query: 497 NAIVDMYVKCGVLVLARSLFD-MIPAKDLISWTIMIAGYGMHG 538
             ++D+    G+   A  +   M    D + W  ++    MHG
Sbjct: 439 GCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHG 481



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 162/392 (41%), Gaps = 77/392 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + E GN ++A+E+     K+ +  D  T  +++   A   S+E G++VHS I
Sbjct: 162 SWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWI 221

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   +  ++ + L+  +  CG+++    +F  +    V  WN+L+  Y+    +KE+
Sbjct: 222 ADHGFGSNLKIVNA-LIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEA 280

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----------SRRVKD------------ 219
           L LF++M   G + +  T   +L   A +G             +R+K             
Sbjct: 281 LLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 340

Query: 220 -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      AH++F+ +  + + +WN MI G+  +G A    ++F  M       D  
Sbjct: 341 DMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDI 400

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V +LS C++ G L  GR  H F       + ++ N  +       G            
Sbjct: 401 TFVGLLSACSHAGMLDLGR--HIF-------RSMTHNYKITPKLEHYG------------ 439

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                     MI      G+F  A  +   M    +EPD     S+L AC   G +E+G+
Sbjct: 440 ---------CMIDLLGHSGLFKEAEEMISTMT---MEPDGVIWCSLLKACKMHGNVELGE 487

Query: 389 DVHD---YIKENDMQSSLYVSNALMDMYAKCG 417
                   I+ N+  S + +SN    +YA  G
Sbjct: 488 KFAQNLFKIEPNNPGSYVLLSN----IYATAG 515


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/714 (35%), Positives = 390/714 (54%), Gaps = 56/714 (7%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
            F+ N L+  Y+K+G    +  +F +M    +    +T + +L  LA   +SR V D  +
Sbjct: 48  TFLLNHLLTAYAKSGRLARARRVFDEMPDPNL----FTRNALLSALA---HSRLVPDMER 100

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN----LGFNVDLATMVTVLSGCA 278
           LF  + +RD VS+N +I+G+ + G   + +++++ +L         + L+ M+ V S  +
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV---- 334
           +      G +VH   L+  F       + L+DMY+K G +  A RVF++M  ++VV    
Sbjct: 161 DRA---LGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNT 217

Query: 335 ---------------------------SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
                                      +WT+M+ G  + G+   A+ +FR M  EG+  D
Sbjct: 218 LITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGID 277

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
            Y   SIL AC      E GK +H YI     + +++V +AL+DMY+KC S+  AE+VF 
Sbjct: 278 QYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFR 337

Query: 428 QMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALER 476
           +M  ++I+SW  MI           A+  F  M +   +PD  T+  ++ +CA+LA+LE 
Sbjct: 338 RMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEE 397

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           G + H   L  G+     V+NA+V +Y KCG +  A  LFD +   D +SWT ++ GY  
Sbjct: 398 GAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQ 457

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
            G   + I  F  M   G++PD V+FI VL ACS +GLV++G  +F+ M+ + +I P  +
Sbjct: 458 FGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDD 517

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HY CM+DL SR+G   EA  FI+ MP +PDA  W +LL  CR+   +++ +  AE++ E 
Sbjct: 518 HYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLET 577

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           +P N   YVLL +++A   +W EV  LR  +  R +KK PGCSWI+ K KV+IF A   S
Sbjct: 578 DPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQS 637

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP + +I   L+ L  +M  EGY P     L +  + +K   +  HSEKLA+AFG++ +P
Sbjct: 638 HPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVP 697

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               IR+ KNLRVC DCH   KF+SK   R+I++RD+ RFH F DG CSC  FW
Sbjct: 698 QEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 232/490 (47%), Gaps = 55/490 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           +YNA I  F   G+  +++++   L   E  +    T  +++ + + L     G  VH  
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +   G       +GS LV M+   G +++ RRVF +++   V ++N L+     TG    
Sbjct: 172 VLRLGFGAY-AFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI-----TG---- 221

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
                                 +L+C       + ++DA  LF  + DRD ++W  M++G
Sbjct: 222 ----------------------LLRC-------KMIEDAKGLFQLMVDRDSITWTTMVTG 252

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
              NG+  + L+VF+ M   G  +D  T  ++L+ C    A   G+ +HA+  +  +   
Sbjct: 253 LTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDN 312

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +   + L+DMYSKC  +  A  VF +M  R+++SWT+MI GY +    + A+R F  M  
Sbjct: 313 VFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQM 372

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           +GI+PD + + S++ +CA    LE G   H     + +   + VSNAL+ +Y KCGS+ D
Sbjct: 373 DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIED 432

Query: 422 AESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACAS 470
           A  +F++M   D VSW  ++            +DLF  ML N  +PDGVT   +L AC+ 
Sbjct: 433 AHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSR 492

Query: 471 LAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWT 528
              +E+G +    + + H I    +    ++D+Y + G    A      +P + D   W 
Sbjct: 493 AGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWA 552

Query: 529 IMIAGYGMHG 538
            +++   + G
Sbjct: 553 TLLSSCRLRG 562



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 120/253 (47%), Gaps = 15/253 (5%)

Query: 43  HSSCTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTY 99
           +S C    ++ ++ + + C+   ++ A I  + +    E+A+      +   I  D  T 
Sbjct: 323 YSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
            S++  CA+L SLE+G + H +   SG++    V  + LV ++  CG +++  R+F+++ 
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITV-SNALVTLYGKCGSIEDAHRLFDEMS 441

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
                 W  L+  Y++ G  KE++ LF+KM   G+  D  TF  VL   +  G    V+ 
Sbjct: 442 FHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAG---LVEK 498

Query: 220 AHKLFDELS-DRDVVS----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
               FD +  D D+V     + CMI  Y  +G  ++  E  K+M +   + D     T+L
Sbjct: 499 GCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPH---SPDAFGWATLL 555

Query: 275 SGCANCGALMFGR 287
           S C   G +  G+
Sbjct: 556 SSCRLRGNMEIGK 568


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/690 (37%), Positives = 369/690 (53%), Gaps = 84/690 (12%)

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVV 233
           S T +  ++      +   G+  D++  +   K L+   N+    DA  + D + + +V 
Sbjct: 24  STTASLSQTRQAHAHILKTGLFNDTHLAT---KLLSHYANNMCFADATLVLDLVPEPNVF 80

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           S++ +I  +         L  F +ML  G   D   + + +  CA   AL   R VH  A
Sbjct: 81  SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIA 140

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
             + F  +    ++L+ MY KC  +  A RVF++M E  VVSW++++A YAR+G  D A 
Sbjct: 141 SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAK 200

Query: 354 RLF---------------RGMVR--------------------EGIEPDVYAITSILHAC 378
           RLF                GM+                      G EPD   I+S+L A 
Sbjct: 201 RLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAV 260

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI---- 434
                L +G  +H Y+ +  + S   VS+AL+DMY KC   ++   VF+QM   D+    
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCN 320

Query: 435 -------------------------------VSWNTMIG----------ALDLFVAM-LQ 452
                                          VSW +MI           AL+LF  M + 
Sbjct: 321 AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIA 380

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
             +P+ VT+ C+LPAC ++AAL  G+  H + LR GIS D  V +A++DMY KCG +  +
Sbjct: 381 GVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQAS 440

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           R  FD IP K+L+ W  +IAGY MHG   +A+  F+ M+++G +PD +SF  VL ACS S
Sbjct: 441 RICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQS 500

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           GL +EG  +FN M  +  IE ++EHYACMV LLSR G L +AY  I  MPV PDA +WG+
Sbjct: 501 GLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGA 560

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           LL  CR+H+ V L E  AE +FELEP N G Y+LL+N+YA    W EV ++R+ +  +GL
Sbjct: 561 LLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGL 620

Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 752
           +KNPGCSWIE+K KV++ +AG  SHP   +I   L +L +EMK+ GYFP+  + L + +E
Sbjct: 621 RKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVEE 680

Query: 753 MEKEVALCGHSEKLAMAFGILNLPAGQTIR 782
            +KE  LCGHSEKLA+ FG+LN P G  ++
Sbjct: 681 QDKEQILCGHSEKLAVVFGLLNTPPGYPLQ 710



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/541 (24%), Positives = 238/541 (43%), Gaps = 86/541 (15%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D +   S ++ CA L +L+  ++VH I   SG    D  + S LV M++ C  +++  RV
Sbjct: 113 DNRVLPSAVKACAGLSALKPARQVHGIASVSGF-DSDSFVQSSLVHMYIKCNQIRDAHRV 171

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+++    V  W+ L+  Y++ G   E+  LF +M   G+                    
Sbjct: 172 FDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQP------------------ 213

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                           +++SWN MI+G+  +G+  + + +F +M   GF  D  T+ +VL
Sbjct: 214 ----------------NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVL 257

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC------------------- 315
               +   L+ G  +H + +K     +   ++ L+DMY KC                   
Sbjct: 258 PAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVG 317

Query: 316 ------------GDLDGAIRVFEKMGER----SVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                       G ++ ++R+F ++ ++    +VVSWTSMIA  ++ G    A+ LFR M
Sbjct: 318 SCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREM 377

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
              G++P+   I  +L AC     L  GK  H +     + + +YV +AL+DMYAKCG +
Sbjct: 378 QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRI 437

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPAC 468
             +   F+ +P K++V WN +I           A+++F  M ++ + PD ++  C+L AC
Sbjct: 438 QASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSAC 497

Query: 469 ASLAALERGR-EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLIS 526
           +     E G    +    ++GI A       +V +  + G L  A ++   +P   D   
Sbjct: 498 SQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACV 557

Query: 527 WTIMIAGYGMH-GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           W  +++   +H       +A           P     +S +YA    G+ +E  R  +MM
Sbjct: 558 WGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYAS--KGMWNEVNRVRDMM 615

Query: 586 R 586
           +
Sbjct: 616 K 616



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 172/397 (43%), Gaps = 55/397 (13%)

Query: 267 LATMVTVLSGCANC-----GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           LA + +V     NC      +L   R  HA  LK     +      LL  Y+       A
Sbjct: 8   LALLDSVQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADA 67

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             V + + E +V S++++I  +++   F  A+  F  M+  G+ PD   + S + ACA  
Sbjct: 68  TLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGL 127

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             L+  + VH     +   S  +V ++L+ MY KC  + DA  VF++M   D+VSW+ ++
Sbjct: 128 SALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALV 187

Query: 442 GAL----------DLFVAM------------------------------------LQNFE 455
            A            LF  M                                    L+ FE
Sbjct: 188 AAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE 247

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           PDG T++ +LPA   L  L  G  IHGY+++ G+ +D+ V++A++DMY KC        +
Sbjct: 248 PDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQV 307

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           FD +   D+ S    I G   +G    ++  F  ++  G+E + VS+ S++  CS +G  
Sbjct: 308 FDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRD 367

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
            E    F  M+    ++P      C   LL   GN++
Sbjct: 368 MEALELFREMQI-AGVKPNSVTIPC---LLPACGNIA 400



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 21/229 (9%)

Query: 54  SISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLE 113
           S +  + C ++N     GR  E   L + M++       K ++ T   +L  C ++ +L 
Sbjct: 353 SWTSMIACCSQN-----GRDMEALELFREMQI----AGVKPNSVTIPCLLPACGNIAALM 403

Query: 114 DGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
            GK  H      GI  D  V GS L+ M+  CG ++  R  F+ I    +  WN ++  Y
Sbjct: 404 HGKAAHCFSLRRGISTDVYV-GSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGY 462

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR--- 230
           +  G  KE++ +F  MQ  G   D  +F+CV   L+    S   ++    F+ +S +   
Sbjct: 463 AMHGKAKEAMEIFDLMQRSGQKPDIISFTCV---LSACSQSGLTEEGSYYFNSMSSKYGI 519

Query: 231 --DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
              V  + CM++     G  E+   + + M     N D      +LS C
Sbjct: 520 EARVEHYACMVTLLSRAGKLEQAYAMIRRM---PVNPDACVWGALLSSC 565


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 290/826 (35%), Positives = 437/826 (52%), Gaps = 63/826 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSE--KSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  + + G+   A  +  S +   S+    T+ S++     L    D + +  I+
Sbjct: 173 SWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTE-PDVRLLEQIM 231

Query: 123 C---ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
           C   +SG++ D  V GS LV  F   G L   R+VFN+++       N LM    +    
Sbjct: 232 CTIQKSGLLTDLFV-GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWG 290

Query: 180 KESLYLFKKMQSL-GIAADSYTF----------------------------SCVLKCLAV 210
           +E+  LF  M S+  ++ +SY                              + ++  +  
Sbjct: 291 EEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVG 350

Query: 211 VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
           +GN           + DA ++F  ++D+D VSWN MI+G   NG   + +E +K M    
Sbjct: 351 IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHD 410

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
                 T+++ LS CA+      G+ +H  +LK      +S +N L+ +Y++ G L+   
Sbjct: 411 ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECR 470

Query: 323 RVFEKMGERSVVSWTSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
           ++F  M E   VSW S+I   AR E     A+  F    R G + +    +S+L A +  
Sbjct: 471 KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTM 440
              E+GK +H    +N++       NAL+  Y KCG M   E +F++M   +D V+WN+M
Sbjct: 531 SFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590

Query: 441 IG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGI 489
           I           ALDL   MLQ  +  D    A +L A AS+A LERG E+H   +R  +
Sbjct: 591 ISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 650

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
            +D  V +A+VDMY KCG L  A   F+ +P ++  SW  MI+GY  HG G +A+  F  
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710

Query: 550 MRQAG-IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
           M+  G   PD V+F+ VL ACSH+GL++EG++ F  M     + P++EH++CM D+L R 
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRA 770

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGC-RIH-HEVKLAEKVAEHVFELEPDNTGYYVL 666
           G L +   FIE MP+ P+  IW ++L  C R +  + +L +K AE +F+LEP+N   YVL
Sbjct: 771 GELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVL 830

Query: 667 LANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESL 726
           L N+YA   +WE++ K R+K+    +KK  G SW+ +K  V++FVAG  SHP A  I   
Sbjct: 831 LGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKK 890

Query: 727 LKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT--IRVT 784
           LK L  +M+  GY P+T +AL + ++  KE  L  HSEKLA+AF +L      T  IR+ 
Sbjct: 891 LKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAF-VLAAQRSSTLPIRIM 949

Query: 785 KNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KNLRVCGDCH   K++SK   R+I+LRDSNRFHHF+DG CSC  FW
Sbjct: 950 KNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 170/663 (25%), Positives = 295/663 (44%), Gaps = 85/663 (12%)

Query: 77  GNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLED--GKKVHSIICESGIVIDDG 132
           G  ++A+  L    K  I +  Y   S+L+ C ++ S+    G+++H ++ +    +D  
Sbjct: 81  GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD-A 139

Query: 133 VLGSKLVFMFVTC-GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
           V+ + L+ M+  C G +      F  I+      WN ++  YS+ G+ + +  +F  MQ 
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199

Query: 192 LGIAADSYTFS---------------------CVLK-------------CLAVVGNSRRV 217
            G     YTF                      C ++              ++    S  +
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS-- 275
             A K+F+++  R+ V+ N ++ G +     E+  ++F +M N   +V   + V +LS  
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSF 318

Query: 276 ---GCANCGALMFGRAVHAFALKACFSK-EISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
                A    L  GR VH   +        +   N L++MY+KCG +  A RVF  M ++
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             VSW SMI G  + G F  A+  ++ M R  I P  + + S L +CA     ++G+ +H
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAML 451
               +  +  ++ VSNALM +YA+ G + +   +F+ MP  D VSWN++IGAL    A  
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL----ARS 494

Query: 452 QNFEPDGVTMACILPACASLAALER------------------GREIHGYILRHGISADR 493
           +   P+ V   C L A  +   L R                  G++IHG  L++ I+ + 
Sbjct: 495 ERSLPEAVV--CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552

Query: 494 NVANAIVDMYVKCGVLVLARSLFD-MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
              NA++  Y KCG +     +F  M   +D ++W  MI+GY  +     A+     M Q
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ 612

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH----YACMVDLLSRT 608
            G   D   + +VL A +    ++ G     M  + C++   LE      + +VD+ S+ 
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLERG-----MEVHACSVRACLESDVVVGSALVDMYSKC 667

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV---FELEPDNTGYYV 665
           G L  A RF   MPV  ++  W S++ G   H + + A K+ E +    +  PD+  +  
Sbjct: 668 GRLDYALRFFNTMPV-RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVG 726

Query: 666 LLA 668
           +L+
Sbjct: 727 VLS 729



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 225/451 (49%), Gaps = 24/451 (5%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A K+FDE+  R+ VSW C++SGY  NG  ++ L   ++M+  G   +    V+VL  C  
Sbjct: 55  ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQE 114

Query: 280 CGA--LMFGRAVHAFALKACFSKEISFNNTLLDMYSKC-GDLDGAIRVFEKMGERSVVSW 336
            G+  ++FGR +H    K  ++ +   +N L+ MY KC G +  A+  F  +  ++ VSW
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL-HACA-CDGLLEIGKDVHDYI 394
            S+I+ Y++ G    A R+F  M  +G  P  Y   S++  AC+  +  + + + +   I
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN-TMIG---------AL 444
           +++ + + L+V + L+  +AK GS++ A  VFNQM  ++ V+ N  M+G         A 
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294

Query: 445 DLFVAM--LQNFEPDG-VTMACILP--ACASLAALERGREIHGYILRHG-ISADRNVANA 498
            LF+ M  + +  P+  V +    P  + A    L++GRE+HG+++  G +     + N 
Sbjct: 295 KLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +V+MY KCG +  AR +F  +  KD +SW  MI G   +G   +A+  +  MR+  I P 
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
             + IS L +C+       G +       +  I+  +     ++ L + TG L+E  +  
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHG-ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
             MP   D   W S++ G     E  L E V
Sbjct: 474 SSMP-EHDQVSWNSII-GALARSERSLPEAV 502



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 139/568 (24%), Positives = 249/568 (43%), Gaps = 58/568 (10%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D  L + L+  ++  GD    R+VF+++       W  ++  YS+ G  KE+L   + M 
Sbjct: 35  DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRV--KDAHKL------------------------- 223
             GI ++ Y F  VL+    +G+   +  +  H L                         
Sbjct: 95  KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154

Query: 224 --------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG---FNVDLATMVT 272
                   F ++  ++ VSWN +IS Y   G       +F  M   G         ++VT
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
                      +    +     K+    ++   + L+  ++K G L  A +VF +M  R+
Sbjct: 215 TACSLTEPDVRLL-EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAI---TSILHACACDGLLEIGK 388
            V+   ++ G  R+   + A +LF  M     + P+ Y I   +   ++ A +  L+ G+
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGR 333

Query: 389 DVHDYIKENDMQSSLY-VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL- 446
           +VH ++    +   +  + N L++MYAKCGS+ADA  VF  M  KD VSWN+MI  LD  
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393

Query: 447 --FVAMLQNFE--------PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
             F+  ++ ++        P   T+   L +CASL   + G++IHG  L+ GI  + +V+
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS 453

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC-DAIATFNDMRQAGI 555
           NA++ +Y + G L   R +F  +P  D +SW  +I           +A+  F + ++AG 
Sbjct: 454 NALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ 513

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           + + ++F SVL A S     + G +  + +  + NI  +      ++    + G +    
Sbjct: 514 KLNRITFSSVLSAVSSLSFGELG-KQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEV 643
           +    M    D   W S++ G  IH+E+
Sbjct: 573 KIFSRMAERRDNVTWNSMISG-YIHNEL 599



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 170/372 (45%), Gaps = 23/372 (6%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
            R  H+   K    K++   N L++ Y + GD   A +VF++M  R+ VSW  +++GY+R
Sbjct: 20  ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI--GKDVHDYIKENDMQSSL 403
            G    A+   R MV+EGI  + YA  S+L AC   G + I  G+ +H  + +       
Sbjct: 80  NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139

Query: 404 YVSNALMDMYAKC-GSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-L 451
            VSN L+ MY KC GS+  A   F  + VK+ VSWN++I           A  +F +M  
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199

Query: 452 QNFEPDGVTMACILPACASLAA--LERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
               P   T   ++    SL    +    +I   I + G+  D  V + +V  + K G L
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             AR +F+ +  ++ ++   ++ G     +G +A   F DM    I+    S++ +L + 
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSF 318

Query: 570 SHSGLVDE-----GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
               L +E     G      +     ++  +     +V++ ++ G++++A R    M   
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM-TD 377

Query: 625 PDATIWGSLLCG 636
            D+  W S++ G
Sbjct: 378 KDSVSWNSMITG 389



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 149/332 (44%), Gaps = 34/332 (10%)

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
           +C G     +  H  + +N +   +Y+ N L++ Y + G    A  VF++MP+++ VSW 
Sbjct: 12  SCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWA 71

Query: 439 TMI------GALDLFVAMLQNFEPDGV-----TMACILPACASLAALE--RGREIHGYIL 485
            ++      G     +  L++   +G+         +L AC  + ++    GR+IHG + 
Sbjct: 72  CIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMF 131

Query: 486 RHGISADRNVANAIVDMYVKC-GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
           +   + D  V+N ++ MY KC G +  A   F  I  K+ +SW  +I+ Y   G    A 
Sbjct: 132 KLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAF 191

Query: 545 ATFNDMRQAGIEPDEVSFIS-VLYACSHSGLVDEGWRFFNMMRYECNIEPK-----LEHY 598
             F+ M+  G  P E +F S V  ACS   L +   R    +   C I+       L   
Sbjct: 192 RIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIM--CTIQKSGLLTDLFVG 246

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV---AEHVFE 655
           + +V   +++G+LS A +    M      T+ G L+ G       + A K+      + +
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNG-LMVGLVRQKWGEEATKLFMDMNSMID 305

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEV--KKLRE 685
           + P++   YV+L + + E    EEV  KK RE
Sbjct: 306 VSPES---YVILLSSFPEYSLAEEVGLKKGRE 334


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/707 (35%), Positives = 392/707 (55%), Gaps = 35/707 (4%)

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           LKEG+ V       +  ++  L+H   +TG+   +  L   M   G   D +  + ++  
Sbjct: 70  LKEGQSV-------QSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNV 122

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
               GNS   +DA  LFDE+ +++VV+W  +I+GY  N      LEVF EML LG     
Sbjct: 123 YMRCGNS---QDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSD 179

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T+  +LS C     +  G+ VH + +K   +   S  N+L  +Y+K G+L+  IR F++
Sbjct: 180 YTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKR 239

Query: 328 MGERSVVSWTSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
           + +++V++WT+MI+  A  E   +  + LF  M++  + P+ + +TS++  C     + +
Sbjct: 240 IPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNL 299

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
           GK V  +  +    ++L V N+ M +Y + G   +A  +F +M    +++WN MI     
Sbjct: 300 GKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQ 359

Query: 443 -----------------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYI 484
                            AL +F  ++++  +PD  T + IL  C+++ ALE+G +IH   
Sbjct: 360 IMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQT 419

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
           ++ G  +D  V +A+V+MY KCG +  A   F  +P + L++WT MI+GY  HG   DAI
Sbjct: 420 IKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAI 479

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
             F DM  AG +P+E++F+S+L ACS++GLV+E  R+F+MM+ E +IEP ++HY CM+D+
Sbjct: 480 QLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDM 539

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
             R G L +AY FI+     P+  IW SL+ GCR H  ++LA   A+ + EL+P     Y
Sbjct: 540 FVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETY 599

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
           VLL N+Y    +W +V ++R+      L      SWI I+ KV  F A   SHP + ++ 
Sbjct: 600 VLLLNMYISTGRWRDVARVRKLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELY 659

Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEMEKEVA--LCGHSEKLAMAFGILNLPAGQTIR 782
            LL+ L  + K  GY P     L +++E  K  A  L  HSE+LA+A G+L  P G T+R
Sbjct: 660 QLLETLLEKAKAIGYEPYQNTELYDSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTVR 719

Query: 783 VTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           +TKN+ +C DCH   KF S  A REIV+RDS R H FKDGRCSC  F
Sbjct: 720 ITKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 203/417 (48%), Gaps = 29/417 (6%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           ML  G +V  A  V +L  C   G+L   +A+H   +K     +I    +L+++Y +CG+
Sbjct: 69  MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGN 128

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
              A  +F++M E++VV+WT++I GY        A+ +F  M++ G  P  Y +  +L A
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSA 188

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           C     +++GK VH Y  +    S   + N+L  +Y K G++      F ++P K++++W
Sbjct: 189 CVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITW 248

Query: 438 NTMIGA-----------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYIL 485
            TMI A           L+LF+ ML+    P+  T+  ++  C +   +  G+++ G+  
Sbjct: 249 TTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCF 308

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG---------M 536
           + G + +  V N+ + +Y++ G    A  LF+ +    +I+W  MI+G+          +
Sbjct: 309 KIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDL 368

Query: 537 HG--FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
           H    G  A+  F D+ ++ ++PD  +F S+L  CS    +++G +  +    +      
Sbjct: 369 HARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQ-IHAQTIKTGFLSD 427

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC----RIHHEVKLAE 647
           +   + +V++ ++ G +  A +    MP     T W S++ G     R H  ++L E
Sbjct: 428 VVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVT-WTSMISGYSQHGRPHDAIQLFE 483



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 195/424 (45%), Gaps = 71/424 (16%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T   +L  C    +++ GK+VH    + G      + G+ L  ++   G+L+ G R F +
Sbjct: 181 TLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSI-GNSLCRLYTKSGNLESGIRAFKR 239

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKE-SLYLFKKMQSLGIAADSYTFSCVLK---------- 206
           I +  V  W  ++   ++  N+ E  L LF  M    +  + +T + V+           
Sbjct: 240 IPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNL 299

Query: 207 -------CLAV-------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYI- 243
                  C  +       V NS           ++A +LF+E+ D  V++WN MISG+  
Sbjct: 300 GKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQ 359

Query: 244 ----------ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
                     A     + L++F++++      DL T  ++LS C+   AL  G  +HA  
Sbjct: 360 IMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQT 419

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           +K  F  ++  N+ L++MY+KCG ++ A + F +M  R++V+WTSMI+GY++ G    AI
Sbjct: 420 IKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAI 479

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
           +LF  M+  G +P+     S+L AC+  GL+E      + ++  DM  + Y    LMD Y
Sbjct: 480 QLFEDMILAGAKPNEITFVSLLSACSYAGLVE------EAMRYFDMMQNEYHIEPLMDHY 533

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQN--FEPDGVTMACILPACASL 471
              G M D       M V+        +G LD   A ++   FEP+    + ++  C S 
Sbjct: 534 ---GCMID-------MFVR--------LGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSH 575

Query: 472 AALE 475
             +E
Sbjct: 576 GNME 579



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 133/310 (42%), Gaps = 54/310 (17%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  S++ LC     +  GK+V     + G   +  V  S + ++++  G+ +E  R+F +
Sbjct: 283 TLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTM-YLYLRKGETEEAMRLFEE 341

Query: 158 IDNGKVFIWNLLMHEYSKTGNFK-----------ESLYLFKKMQSLGIAADSYTFSCVLK 206
           +++  V  WN ++  +++  +             ++L +F+ +    +  D +TFS +L 
Sbjct: 342 MEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILS 401

Query: 207 CLA-----------------------VVGNSRRV---------KDAHKLFDELSDRDVVS 234
             +                       VV NS  V         + A K F E+  R +V+
Sbjct: 402 VCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVT 461

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           W  MISGY  +G     +++F++M+  G   +  T V++LS C+  G  +   A+  F +
Sbjct: 462 WTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAG--LVEEAMRYFDM 519

Query: 295 ---KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREG--- 347
              +      +     ++DM+ + G LD A    ++ G E +   W+S++AG    G   
Sbjct: 520 MQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNME 579

Query: 348 -VFDGAIRLF 356
             F  A RL 
Sbjct: 580 LAFYAADRLL 589



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 22/259 (8%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T+ SIL +C+ + +LE G+++H+   ++G  + D V+ S LV M+  CG ++   
Sbjct: 390 KPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGF-LSDVVVNSALVNMYNKCGCIEYAT 448

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           + F ++    +  W  ++  YS+ G   +++ LF+ M   G   +  TF  +L   +  G
Sbjct: 449 KAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAG 508

Query: 213 NSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
               V++A + FD + +   +      + CMI  ++  G  +      K     GF  + 
Sbjct: 509 ---LVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRK---GFEPNE 562

Query: 268 ATMVTVLSGCANCG--ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV- 324
           A   ++++GC + G   L F  A     LK    K +     LL+MY   G      RV 
Sbjct: 563 AIWSSLVAGCRSHGNMELAFYAADRLLELKP---KVVETYVLLLNMYISTGRWRDVARVR 619

Query: 325 ----FEKMGERSVVSWTSM 339
                E +G     SW ++
Sbjct: 620 KLSKHEDLGILRDRSWITI 638


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/747 (34%), Positives = 394/747 (52%), Gaps = 92/747 (12%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL- 227
           L+H Y+ + +      LF+     G  A +         +A    + R++DA   FD + 
Sbjct: 69  LIHLYTLSPDLATPAALFRSDPDPGPVAAT-------SLVAAHAAAGRLRDAAAFFDAVP 121

Query: 228 -SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMF 285
            + RD V  N M+S +    +A   + VF  +L  G    D  +   ++S       L  
Sbjct: 122 PARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAA 181

Query: 286 GR--AVHAFALKACFSKEISFNNTLLDMYSKC---------------------------- 315
                +H   LK+  +  +S +N L+ +Y KC                            
Sbjct: 182 PHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMV 241

Query: 316 ------GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
                 GD++ A  VFE++  +  V W +MI+GY + G+   A  LFR MV E +  D +
Sbjct: 242 VGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEF 301

Query: 370 AITSILHACACDGLLEIGKDVHDYI---KENDM-QSSLYVSNALMDMYAKCGSMADAESV 425
             TS+L ACA  G    GK VH  I   + N + +++L V+NAL+ +Y+K G +  A+ +
Sbjct: 302 TFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRI 361

Query: 426 FNQMPVKDIVSWNTMIG-----------------------------------------AL 444
           F+ M +KD+VSWNT++                                          AL
Sbjct: 362 FDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDAL 421

Query: 445 DLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            LF  M  ++ +P   T A  + AC  L AL+ GR++H ++++ G  A  +  NA++ MY
Sbjct: 422 KLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMY 481

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +  AR +F ++P  D +SW  MI+  G HG G +A+  F+ M   GI+PD +SF+
Sbjct: 482 AKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFL 541

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           ++L AC+H+GLVDEG+ +F  M+ +  I P  +HYA ++DLL R+G + EA   I+ MP 
Sbjct: 542 TILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPF 601

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            P  +IW ++L GCR + +++     A+ +F + P + G Y+LL+N Y+ A +W +  ++
Sbjct: 602 EPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARV 661

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R+ +  RG+KK PGCSWIE+  K+++F+ G + HP A+++   L+ +   M++ GY P T
Sbjct: 662 RKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDT 721

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
           ++ L + +  EKE  L  HSEKLA+ FG+L LP G T+ V KNLR+CGDCH    FMSK 
Sbjct: 722 KFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKA 781

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             REIV+RD  RFHHFKDG CSC  +W
Sbjct: 782 VGREIVVRDVRRFHHFKDGECSCGNYW 808



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 166/383 (43%), Gaps = 75/383 (19%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D +  + +V  +V  GD+   R VF ++D     +WN ++  Y ++G   ++  LF++M 
Sbjct: 233 DDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMV 292

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAH----------------------------- 221
           S  +  D +TF+ VL   A  G     K  H                             
Sbjct: 293 SEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKG 352

Query: 222 -------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV- 273
                  ++FD ++ +DVVSWN ++SGYI +G  +K +EVFK M    +  DL+ MV V 
Sbjct: 353 GKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM---PYKNDLSWMVMVS 409

Query: 274 ---------------------------------LSGCANCGALMFGRAVHAFALKACFSK 300
                                            ++ C   GAL  GR +HA  ++  F  
Sbjct: 410 GYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEA 469

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
             S  N LL MY+KCG ++ A  VF  M     VSW +MI+   + G    A+ LF  MV
Sbjct: 470 SNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMV 529

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA-LMDMYAKCGSM 419
            EGI+PD  +  +IL AC   GL++ G    + +K +   S      A L+D+  + G +
Sbjct: 530 AEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRI 589

Query: 420 ADAESVFNQMPVKDIVS-WNTMI 441
            +A  +   MP +   S W  ++
Sbjct: 590 GEARDLIKTMPFEPTPSIWEAIL 612


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/602 (38%), Positives = 349/602 (57%), Gaps = 43/602 (7%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           T+++ C    AL  GR VHA    + F   +  +N LLDMY+KCG L  A  +F++MG R
Sbjct: 92  TLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHR 151

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMV-REGIEPDVYAITSILHACACDGL------- 383
            + SW +MI GYA+ G  + A +LF  M  R+    +      + H    + L       
Sbjct: 152 DLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQ 211

Query: 384 ------------------------LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
                                   L +GK++H Y+   ++     V +AL+D+Y KCGS+
Sbjct: 212 RHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSL 271

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPAC 468
            +A  +F+QM  +D+VSW TMI              LF  ++Q+   P+  T A +L AC
Sbjct: 272 DEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNAC 331

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A  AA   G+E+HGY++  G        +A+V MY KCG   +AR +F+ +   DL+SWT
Sbjct: 332 ADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWT 391

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            +I GY  +G   +A+  F  + Q+G +PD+V+++ VL AC+H+GLVD+G  +F+ ++ +
Sbjct: 392 SLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEK 451

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             +    +HYAC++DLL+R+G   EA   I+ MPV PD  +W SLL GCRIH  ++LA++
Sbjct: 452 HGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKR 511

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            A+ ++E+EP+N   Y+ LAN+YA A  W EV  +R+ +   G+ K PG SWIEIK +V+
Sbjct: 512 AAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVH 571

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
           +F+ G +SHP    I   L  L  ++K EGY P T + L + +E +KE  L  HSEKLA+
Sbjct: 572 VFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAV 631

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
            FGI++ P G  I+V KNLR C DCH   K++SK  +R+I +RDSNRFH F+DG CSC+ 
Sbjct: 632 VFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKD 691

Query: 829 FW 830
           +W
Sbjct: 692 YW 693



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 242/497 (48%), Gaps = 56/497 (11%)

Query: 57  KTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGK 116
           K LV +   +   +   C+   +++A+E+L+ ++  +   + Y +++  C   ++LE G+
Sbjct: 49  KDLVSEDNKFEEAVDVLCQQKRVKEAVELLHRTD-HRPSARVYSTLIAACVRHRALELGR 107

Query: 117 KVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           +VH+    S  V   GV + ++L+ M+  CG L + + +F+++ +  +  WN ++  Y+K
Sbjct: 108 RVHAHTKASNFV--PGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAK 165

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSW 235
            G  ++                                      A KLFDE+  RD  SW
Sbjct: 166 LGRLEQ--------------------------------------ARKLFDEMPQRDNFSW 187

Query: 236 NCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           N  ISGY+ +    + LE+F+ M  +   + +  T+ + L+  A    L  G+ +H + +
Sbjct: 188 NAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLI 247

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           +   + +    + LLD+Y KCG LD A  +F++M +R VVSWT+MI     +G  +    
Sbjct: 248 RTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFL 307

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LFR +++ G+ P+ Y    +L+ACA      +GK+VH Y+         +  +AL+ MY+
Sbjct: 308 LFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYS 367

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMAC 463
           KCG+   A  VFN+M   D+VSW ++I           AL  F  +LQ+  +PD VT   
Sbjct: 368 KCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVG 427

Query: 464 ILPACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
           +L AC     +++G E  H    +HG+    +    ++D+  + G    A ++ D +P K
Sbjct: 428 VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVK 487

Query: 523 -DLISWTIMIAGYGMHG 538
            D   W  ++ G  +HG
Sbjct: 488 PDKFLWASLLGGCRIHG 504



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 166/407 (40%), Gaps = 72/407 (17%)

Query: 65  NYNAEIGRFCEVGNLEKAME---VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++NA I  +       +A+E   V+   E+S  +  T  S L   A +  L  GK++H  
Sbjct: 186 SWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGY 245

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +  + + +D+ V+ S L+ ++  CG L E R +F+++ +  V  W  ++H   + G  +E
Sbjct: 246 LIRTELNLDE-VVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREE 304

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------- 221
              LF+ +   G+  + YTF+ VL   A        K+ H                    
Sbjct: 305 GFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVH 364

Query: 222 ------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                       ++F+E+   D+VSW  +I GY  NG  ++ L  F+ +L  G   D  T
Sbjct: 365 MYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVT 424

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V VLS C + G +  G                      L+ +    +  G +   +   
Sbjct: 425 YVGVLSACTHAGLVDKG----------------------LEYFHSIKEKHGLMHTAD--- 459

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
                 +  +I   AR G F  A  +   M    ++PD +   S+L  C   G LE+ K 
Sbjct: 460 -----HYACVIDLLARSGRFKEAENIIDNM---PVKPDKFLWASLLGGCRIHGNLELAKR 511

Query: 390 VHDYIKENDMQS-SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
               + E + ++ + Y++  L ++YA  G  ++  +V   M    IV
Sbjct: 512 AAKALYEIEPENPATYIT--LANIYANAGLWSEVANVRKDMDNMGIV 556


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 269/808 (33%), Positives = 420/808 (51%), Gaps = 46/808 (5%)

Query: 68   AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSIICES 125
            A I    + G  E+A+ +      S+I    Y   S+L     ++  E G+++H ++ + 
Sbjct: 231  AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKW 290

Query: 126  GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
            G   +  V    LV ++     L    R+F+ +++     +N L+    + G    +L L
Sbjct: 291  GFHSETYVCNG-LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALEL 349

Query: 186  FKKMQSLGIAADSYTFSCVLKCLAVVGNSRR----------------------------- 216
            F KMQ   +  D  T + +L   A VG   +                             
Sbjct: 350  FTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSK 409

Query: 217  ---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
               V+ AHK F      ++V WN M+  Y          E+F++M   G   +  T  ++
Sbjct: 410  CADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSI 469

Query: 274  LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
            L  C + GAL  G  +H   +K  F   +   + L+DMY+K G L  A+R+  ++ E  V
Sbjct: 470  LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDV 529

Query: 334  VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
            VSWT+MIAGY +  +F  A++LF  M   GI+ D     S + ACA    L  G+ +H  
Sbjct: 530  VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ 589

Query: 394  IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
                   + L ++NAL+ +YA+CG + +A   F ++  K+ +SWN+++           A
Sbjct: 590  SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEA 649

Query: 444  LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
            L +FV ML+   E +  T    + A ASLA +++G++IH  +L+ G  ++R V+N+++ +
Sbjct: 650  LQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISL 709

Query: 503  YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
            Y K G +  A   F+ +  +++ISW  MI GY  HG G +A+  F +M+  GI P+ V+F
Sbjct: 710  YAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTF 769

Query: 563  ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
            + VL ACSH GLV EG  +F  M    ++ PK EHY C+VDLL R G L  A  +I+ MP
Sbjct: 770  VGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMP 829

Query: 623  VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
            +  DA IW +LL  C IH  +++ E+ A H+ ELEP+++  YVL++N+YA + +W     
Sbjct: 830  IPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDW 889

Query: 683  LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
             R+ +   G+KK PG SWIE+K  V+ F AG   HP   +I   +  L       GY   
Sbjct: 890  SRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQD 949

Query: 743  TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
            +   L  +++ +K+     HSEKLA+AFG+L+L     IRV KNLRVC DCH   K++SK
Sbjct: 950  SFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSK 1009

Query: 803  TARREIVLRDSNRFHHFKDGRCSCRGFW 830
             + R I++RD++RFHHF  G CSC+ FW
Sbjct: 1010 ISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 173/591 (29%), Positives = 280/591 (47%), Gaps = 57/591 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG--VLGSKLVFMFVTCGDLKEGR 152
           + + Y  +L+ C    SL +  ++H  I +SG    DG  +L   LV  +   GD     
Sbjct: 57  NYQNYLWLLEGCLTSGSLFETMRLHCRISKSGF---DGEPLLIDSLVDNYFRHGDQHGAV 113

Query: 153 RVFNKIDNGKVFIWNLLMHEY-SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
           +VF++  N  VF WN ++H + ++  NF +   LF++M + GI  + YTF+ VLK  A V
Sbjct: 114 KVFDENSNRSVFSWNKMIHVFVAQKSNF-QVFCLFRRMLAEGITPNGYTFAGVLK--ACV 170

Query: 212 G-----------NSRR------------------------VKDAHKLFDELSDRDVVSWN 236
           G           +SR                         ++ A K+F+ +  +D+V+W 
Sbjct: 171 GGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWV 230

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MISG   NG+ E+ + +F +M           + +VLS          G  +H   +K 
Sbjct: 231 AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKW 290

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            F  E    N L+ +YS+   L  A R+F  M  R  VS+ S+I+G  ++G  D A+ LF
Sbjct: 291 GFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELF 350

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M R+ ++PD   + S+L ACA  G L  G  +H +  +  M + + +  +L+D+Y+KC
Sbjct: 351 TKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKC 410

Query: 417 GSMADAESVFNQMPVKDIVSWNTMI---GALD-------LFVAM-LQNFEPDGVTMACIL 465
             +  A   F     ++IV WN M+   G LD       +F  M ++   P+  T   IL
Sbjct: 411 ADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSIL 470

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
             C SL AL  G +IH ++++ G   +  V + ++DMY K G L LA  +   +P  D++
Sbjct: 471 RTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVV 530

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           SWT MIAGY  H    +A+  F +M   GI+ D + F S + AC+    + +G +  +  
Sbjct: 531 SWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ-IHAQ 589

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            Y       L     ++ L +R G + EAY   E +    + + W SL+ G
Sbjct: 590 SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSG 639



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 168/610 (27%), Positives = 296/610 (48%), Gaps = 57/610 (9%)

Query: 98  TYCSILQLC--ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVF 155
           T+  +L+ C   D+ +    K+VHS     G      ++ + L+ ++   G ++  ++VF
Sbjct: 161 TFAGVLKACVGGDI-AFNYVKQVHSRTFYYGFD-SSPLVANLLIDLYSKNGYIESAKKVF 218

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK--------- 206
           N I    +  W  ++   S+ G  +E++ LF  M +  I    Y  S VL          
Sbjct: 219 NCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFE 278

Query: 207 ------CL-----------------AVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                 CL                 A+   SR++  A ++F  ++ RD VS+N +ISG +
Sbjct: 279 LGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLV 338

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
             G +++ LE+F +M       D  T+ ++LS CA+ GAL  G  +H+ A+KA  S +I 
Sbjct: 339 QQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADII 398

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
              +LLD+YSKC D++ A + F      ++V W  M+  Y +      +  +FR M  EG
Sbjct: 399 LEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEG 458

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           + P+ +   SIL  C   G L +G+ +H ++ +   Q ++YV + L+DMYAK G +A A 
Sbjct: 459 MIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALAL 518

Query: 424 SVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNFEP--------DGVTMACILPACASLA 472
            +  ++P  D+VSW  MI      D+F   LQ FE         D +  A  + ACA + 
Sbjct: 519 RILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIR 578

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           AL +G++IH      G  AD ++ NA++ +Y +CG +  A   F+ I  K+ ISW  +++
Sbjct: 579 ALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVS 638

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           G    G+  +A+  F  M +   E +  ++ S + A +    + +G +  +M+  +   +
Sbjct: 639 GLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMV-LKTGYD 697

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMP----VAPDATIWGSLLCGC-----RIHHEV 643
            + E    ++ L +++G++S+A+R    M     ++ +A I G    GC     R+  E+
Sbjct: 698 SEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEM 757

Query: 644 KLAEKVAEHV 653
           K+   +  HV
Sbjct: 758 KVCGIMPNHV 767



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 256/520 (49%), Gaps = 48/520 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +YN+ I    + G  ++A+E+    ++   K D  T  S+L  CA + +L  G ++HS  
Sbjct: 329 SYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHA 388

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G+  D  +L   L+ ++  C D++   + F   +   + +WN+++  Y +  N  +S
Sbjct: 389 IKAGMSADI-ILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDS 447

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG--------NSRRVKD--------------- 219
             +F++MQ  G+  + +T+  +L+    +G        ++  +K                
Sbjct: 448 FEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDM 507

Query: 220 ---------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                    A ++   L + DVVSW  MI+GY+ + +  + L++F+EM   G   D    
Sbjct: 508 YAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGF 567

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            + +S CA   AL  G+ +HA +  A F  ++S NN L+ +Y++CG +  A   FEK+G+
Sbjct: 568 ASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGD 627

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           ++ +SW S+++G A+ G F+ A+++F  M+R   E +++   S + A A    ++ G+ +
Sbjct: 628 KNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQI 687

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  + +    S   VSN+L+ +YAK GS++DA   FN M  ++++SWN MI         
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCG 747

Query: 443 --ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANA 498
             AL LF  M +    P+ VT   +L AC+ +  ++ G +    + + H +         
Sbjct: 748 MEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVC 807

Query: 499 IVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
           +VD+  + G L  A      +P   D + W  +++   +H
Sbjct: 808 VVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIH 847



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 190/398 (47%), Gaps = 16/398 (4%)

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           K +++   M   G   +    + +L GC   G+L     +H    K+ F  E    ++L+
Sbjct: 41  KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           D Y + GD  GA++VF++   RSV SW  MI  +  +        LFR M+ EGI P+ Y
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160

Query: 370 AITSILHAC-ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               +L AC   D      K VH         SS  V+N L+D+Y+K G +  A+ VFN 
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220

Query: 429 MPVKDIVSWNTMIGALD----------LFVAM-LQNFEPDGVTMACILPACASLAALERG 477
           + +KDIV+W  MI  L           LF  M      P    ++ +L A   +   E G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
            ++H  +++ G  ++  V N +V +Y +   L+ A  +F  + ++D +S+  +I+G    
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLE 596
           GF   A+  F  M++  ++PD ++  S+L AC+  G + +G +   + ++   + +  LE
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
               ++DL S+  ++  A++F  +     +  +W  +L
Sbjct: 401 --GSLLDLYSKCADVETAHKFF-LXTETENIVLWNVML 435



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 112/234 (47%), Gaps = 15/234 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ +    + G  E+A++V       +++++  TY S +   A L +++ G+++HS++
Sbjct: 632 SWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMV 691

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G   +  V  S L+ ++   G + +  R FN +    V  WN ++  YS+ G   E+
Sbjct: 692 LKTGYDSEREVSNS-LISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEA 750

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-RDVVS----WNC 237
           L LF++M+  GI  +  TF  VL   + +G    VK+    F+ +    D+V     + C
Sbjct: 751 LRLFEEMKVCGIMPNHVTFVGVLSACSHIG---LVKEGLDYFESMFKIHDLVPKSEHYVC 807

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVH 290
           ++      G  ++ +E  KEM       D     T+LS C     +  G RA H
Sbjct: 808 VVDLLGRAGQLDRAMEYIKEM---PIPADAMIWRTLLSACVIHKNIEIGERAAH 858


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 219/531 (41%), Positives = 332/531 (62%), Gaps = 12/531 (2%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MY KCG +  A  VF+KM  R VVSWT +IAGYA+  +   AI L   M+R    P+ + 
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
            TS+L A    G   IG+ +H    + +    +YV +AL+DMYA+C  M  A  VF+++ 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 431 VKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACASLAALERGRE 479
            K+ VSWN +I            L  F  M +N F     T + +  A A + ALE+GR 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +H ++++ G      V N ++ MY K G +V AR +FD +  +DL++W  M+     +G 
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
           G +A+A F ++R+ GI+ ++++F+SVL ACSH GLV EG  +F+MM+ + N++P+++HY 
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMK-DYNVQPEIDHYV 299

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
             VDLL R G L EA  F+  MP+ P A +WG+LL  CR+H   K+ +  A+HVFEL+PD
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 359

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           +TG  VLL N+YA   KW +  ++R+ +   G+KK P CSW++I+  V++FVA   +HP 
Sbjct: 360 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPK 419

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
           +  I  + + + + +K+ GY P T + L++ +E E+E  L  HSEK+A+AF ++N+PAG 
Sbjct: 420 SGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGA 479

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +IR+ KN+R+CGDCH   K++SK  +REIV+RD+NRFHHF +G CSC  +W
Sbjct: 480 SIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 173/333 (51%), Gaps = 12/333 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V DA  +FD++  RDVVSW  +I+GY  N +  + + +  +ML   F  +  T  ++L  
Sbjct: 8   VSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKA 67

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
              CG    G  +HA A+K  + +++   + LLDMY++C  +D AI VF+++  ++ VSW
Sbjct: 68  TGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSW 127

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++IAG+AR+   +  +  F  M R G     +  +S+  A A  G LE G+ VH ++ +
Sbjct: 128 NALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIK 187

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLF------VAM 450
           +  + + +V N ++ MYAK GSM DA  VF++M  +D+V+WNTM+ AL  +      VA 
Sbjct: 188 SGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAH 247

Query: 451 LQNFEPDG-----VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
            +     G     +T   +L AC+    ++ G+     +  + +  + +   + VD+  +
Sbjct: 248 FEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGR 307

Query: 506 CGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
            G+L  A      +P +   + W  ++    MH
Sbjct: 308 AGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 340



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 153/336 (45%), Gaps = 33/336 (9%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+  CG + + R VF+K+ +  V  W  L+  Y++     E++ L   M       + +T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 201 FSCVLKCLAVVGNSRRVKDAHKL--------------------------------FDELS 228
           F+ +LK     G     +  H L                                FD L 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            ++ VSWN +I+G+      E  L  F EM   GF     T  ++ S  A  GAL  GR 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VHA  +K+         NT+L MY+K G +  A +VF++M +R +V+W +M+   A+ G+
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+  F  + + GI+ +     S+L AC+  GL++ GK   D +K+ ++Q  +    +
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS 300

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            +D+  + G + +A     +MP++   + W  ++GA
Sbjct: 301 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 336



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 127/280 (45%), Gaps = 38/280 (13%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ S+L+          G+++H++  +     +D  +GS L+ M+  C  +     VF++
Sbjct: 60  TFTSLLKATGACGGCSIGEQMHALAVKYNW-DEDVYVGSALLDMYARCEQMDMAIMVFDR 118

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------------ 205
           + +     WN L+  +++  + + +L  F +MQ  G  A  +T+S +             
Sbjct: 119 LVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQG 178

Query: 206 ------------KCLAVVGN--------SRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                       K  A VGN        S  + DA K+FD +  RD+V+WN M++     
Sbjct: 179 RWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQY 238

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS--KEIS 303
           G+ ++ +  F+E+   G  ++  T ++VL+ C++ G +  G+  H F +   ++   EI 
Sbjct: 239 GLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK--HYFDMMKDYNVQPEID 296

Query: 304 FNNTLLDMYSKCGDLDGA-IRVFEKMGERSVVSWTSMIAG 342
              + +D+  + G L  A I VF+   E +   W +++  
Sbjct: 297 HYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 336


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 228/581 (39%), Positives = 345/581 (59%), Gaps = 23/581 (3%)

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT------LLDMYSKCGDLDG 320
           L   +++L  CA+    +  + +HAF+++      +S NN       +  + S    +  
Sbjct: 17  LTKCISLLQFCASSKHKL--KQIHAFSIR----HGVSLNNPDMGKHLIFTIVSLSAPMSY 70

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A  VF  +   +V +W ++I GYA       A   +R MV   +EPD +    +L A + 
Sbjct: 71  AYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISK 130

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              +  G+ +H     N  +S ++V N+L+ +YA CG    A  VF  M  +D+V+WN+M
Sbjct: 131 SLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSM 190

Query: 441 IG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
           I           AL LF  M ++  EPDG T+  +L A A L ALE GR +H Y+L+ G+
Sbjct: 191 INGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGL 250

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
           S + +V N+++D+Y KCG +  A+ +F  +  ++ +SWT +I G  ++GFG +A+  F +
Sbjct: 251 SKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKE 310

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M   G+ P E++F+ VLYACSH G++DEG+ +F  M+ EC I P++EHY CMVDLLSR G
Sbjct: 311 MEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAG 370

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
            + +AY +I+ MPV P+A IW +LL  C IH  + L E    H+  LEP ++G YVLL+N
Sbjct: 371 LVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSN 430

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           +YA   +W +V+ +R  + + G+KK PG S +E+  +V  F  G  SHP ++ + +LL++
Sbjct: 431 LYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEK 490

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
           +   +K EGY P T   L + +E EKE AL  HSEK+A+AF +LN P G  IRV KNLRV
Sbjct: 491 ITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRV 550

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           C DCH   K ++K   REIV+RD +RFHHF+ G CSC+ +W
Sbjct: 551 CADCHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 190/378 (50%), Gaps = 37/378 (9%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT-CGDLKEGRRVFNKID 159
           S+LQ CA  K     K++H+     G+ +++  +G  L+F  V+    +     VF  I 
Sbjct: 22  SLLQFCASSK--HKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIH 79

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR--- 216
           N  VF WN ++  Y+++ N   +   +++M    +  D++T+  +LK ++   N R    
Sbjct: 80  NPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEA 139

Query: 217 -----------------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
                                         + A+K+F+ + +RD+V+WN MI+G+  NG 
Sbjct: 140 IHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGR 199

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
             + L +F+EM   G   D  T+V++LS  A  GAL  GR VH + LK   SK     N+
Sbjct: 200 PNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNS 259

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           LLD+Y+KCG +  A RVF +M ER+ VSWTS+I G A  G  + A+ LF+ M  +G+ P 
Sbjct: 260 LLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPS 319

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVF 426
                 +L+AC+  G+L+ G +    +KE   +   +     ++D+ ++ G +  A    
Sbjct: 320 EITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYI 379

Query: 427 NQMPVK-DIVSWNTMIGA 443
             MPV+ + V W T++GA
Sbjct: 380 QNMPVQPNAVIWRTLLGA 397



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 189/378 (50%), Gaps = 20/378 (5%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
             +V  S  +  A+ +F  + + +V +WN +I GY  +         +++M+      D 
Sbjct: 59  FTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDT 118

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T   +L   +    +  G A+H+  ++  F   +   N+LL +Y+ CGD + A +VFE 
Sbjct: 119 HTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFEL 178

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M ER +V+W SMI G+A  G  + A+ LFR M  EG+EPD + + S+L A A  G LE+G
Sbjct: 179 MKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELG 238

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
           + VH Y+ +  +  + +V+N+L+D+YAKCG++ +A+ VF++M  ++ VSW ++I      
Sbjct: 239 RRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVN 298

Query: 442 ----GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRH----GISAD 492
                AL+LF  M  Q   P  +T   +L AC+    L+ G E   Y  R     GI   
Sbjct: 299 GFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFE---YFRRMKEECGIIPR 355

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG-FGCDAIATFNDM 550
                 +VD+  + G++  A      +P + + + W  ++    +HG  G   IA  + +
Sbjct: 356 IEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLL 415

Query: 551 RQAGIEPDEVSFISVLYA 568
                   +   +S LYA
Sbjct: 416 NLEPKHSGDYVLLSNLYA 433



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 35/282 (12%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           DT TY  +L+  +   ++ +G+ +HS+   +G      V  S L+ ++  CGD +   +V
Sbjct: 117 DTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNS-LLHIYAACGDTESAYKV 175

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN- 213
           F  +    +  WN +++ ++  G   E+L LF++M   G+  D +T   +L   A +G  
Sbjct: 176 FELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGAL 235

Query: 214 --SRRV-----------------------------KDAHKLFDELSDRDVVSWNCMISGY 242
              RRV                             ++A ++F E+S+R+ VSW  +I G 
Sbjct: 236 ELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGL 295

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC-FSKE 301
             NG  E+ LE+FKEM   G      T V VL  C++CG L  G        + C     
Sbjct: 296 AVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPR 355

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 342
           I     ++D+ S+ G +  A    + M  + + V W +++  
Sbjct: 356 IEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 397



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 23/252 (9%)

Query: 456 PDGVTMACI--LPACASLAALERGREIHGYILRHGISAD-----RNVANAIVDMYVKCGV 508
           P+     CI  L  CAS  +  + ++IH + +RHG+S +     +++   IV +      
Sbjct: 13  PENPLTKCISLLQFCAS--SKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSL---SAP 67

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +  A ++F +I   ++ +W  +I GY        A   +  M  + +EPD  ++  +L A
Sbjct: 68  MSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKA 127

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
            S S  V EG    + +      E  +     ++ + +  G+   AY+  E+M    D  
Sbjct: 128 ISKSLNVREG-EAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMK-ERDLV 185

Query: 629 IWGSLLCGC----RIHHEVKLAEKVAEHVFELEPDNTGYYVL-LANVYAEAEKWEEVKKL 683
            W S++ G     R +  + L  +++  V  +EPD  G+ V+ L +  AE    E  +++
Sbjct: 186 AWNSMINGFALNGRPNEALTLFREMS--VEGVEPD--GFTVVSLLSASAELGALELGRRV 241

Query: 684 REKISRRGLKKN 695
              + + GL KN
Sbjct: 242 HVYLLKVGLSKN 253


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 228/514 (44%), Positives = 315/514 (61%), Gaps = 42/514 (8%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           MV +G++P+ + +++++ ACA    LE GK  H+YI +   +S + V  AL+ MYA+CGS
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM---------------LQN 453
           + DA  VF++M  +   +WN MI           AL LF  M                QN
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 454 -----------------FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                             + D   M  +L ACA LAALE GR+ H Y+++ G + D  V 
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           +A+VDMY K G +  A  +FD +P ++ +SW  +I G   HG G DA+  F  M QAGI+
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           P+E+SF+ VL ACSH+GLV+EG  +FN+M     I P + HY CM+DLL R G L EA  
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
           FI  MPV PD ++WG+LL  CRIH   +LA+++AEH+  +E    G YVLL+N+YA A +
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           W++  K+R+ +  RG+ K PG SWIE+K  ++ FVAG +SHP  K+I   L+ L  +MK 
Sbjct: 361 WDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKA 420

Query: 737 EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
            GY P   + L + ++ EKE++L  HSEKLA+AFGI+N   G TIRV KNLRVCGDCH +
Sbjct: 421 AGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTV 480

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KF+S    R+IV+RD+NRFHHFKDGRCSC  +W
Sbjct: 481 IKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 187/353 (52%), Gaps = 41/353 (11%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T  ++++ CA + SLE GK+ H+ I + G   D                      
Sbjct: 7   KPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESD---------------------- 44

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
                     V +   L+H Y++ G+ +++ ++F KM        + T++ ++   A   
Sbjct: 45  ----------VVVQTALVHMYARCGSLEDAGHVFDKMSE----RSTRTWNAMITGHA--- 87

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
            +R +K A KLF E+S+RDVVSW  +I+GY  NG  ++ L VF +M   G   D   M +
Sbjct: 88  QNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGS 147

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           VLS CA+  AL  GR  HA+ +++ F+ +I   + L+DMY+K G ++ A +VF+KM +R+
Sbjct: 148 VLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRN 207

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
            VSW S+I G A+ G  + A+ LF  M++ GI+P+  +   +L AC+  GL+  G+   +
Sbjct: 208 EVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFN 267

Query: 393 YIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            + +N  +   +     ++D+  + G + +AE+  N MPV+ D+  W  ++GA
Sbjct: 268 LMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGA 320



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 164/325 (50%), Gaps = 44/325 (13%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           M+  G   +  T+ TV+  CA+  +L  G+  H + +K  F  ++     L+ MY++CG 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 318 LDGAIRVFEKMGERS-------------------------------VVSWTSMIAGYARE 346
           L+ A  VF+KM ERS                               VVSWT++IAGYA+ 
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G  D ++ +F  M + G++ D + + S+L ACA    LE+G+  H Y+ ++     + V 
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFE 455
           +AL+DMYAK GSM DA  VF++MP ++ VSWN++I           A+ LF  MLQ   +
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240

Query: 456 PDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARS 514
           P+ ++   +L AC+    +  GR     + + +GI  D +    ++D+  + G L  A +
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300

Query: 515 LFDMIPAK-DLISWTIMIAGYGMHG 538
             + +P + D+  W  ++    +HG
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHG 325



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 21/280 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G  ++++ V     K+ + +  +   S+L  CADL +LE G++ H+ +
Sbjct: 109 SWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYV 168

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +SG  +D  V+GS LV M+   G +++  +VF+K+       WN ++   ++ G   ++
Sbjct: 169 VQSGFALDI-VVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDA 227

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSWNC 237
           + LF++M   GI  +  +F  VL   +  G    V +    F+ ++       DV  + C
Sbjct: 228 VLLFEQMLQAGIKPNEISFVGVLSACSHTG---LVNEGRGYFNLMTQNYGIVPDVSHYTC 284

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR--AVHAFALK 295
           MI      G  ++       M       D++    +L  C   G     +  A H   ++
Sbjct: 285 MIDLLGRAGCLDEAENFINGM---PVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGME 341

Query: 296 ACFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSVV 334
                +I+    LL ++Y+  G  D A +V + M +R V+
Sbjct: 342 V----QIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVM 377


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/754 (36%), Positives = 393/754 (52%), Gaps = 53/754 (7%)

Query: 129  IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
            + D  +GS LV  F   G   + + +F ++    V   N LM    K    + +  +F +
Sbjct: 787  LQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHE 846

Query: 189  MQSL-GIAADSYT-FSCVLKCLAVVGNSRR------------------------------ 216
            M+ L GI +DSY          +V+   RR                              
Sbjct: 847  MKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYA 906

Query: 217  ----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
                + DA  +F+ + ++D VSWN +ISG   N  +E   E F  M   G      T+++
Sbjct: 907  KSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLIS 966

Query: 273  VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
             LS CA+ G +M G  +H   LK     ++S +N LL +Y++ G     ++VF  M E  
Sbjct: 967  TLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYD 1026

Query: 333  VVSWTSMIAGYA-REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             VSW S+I   +  E     A++ F  M+R G         +IL A +   L E+   +H
Sbjct: 1027 QVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIH 1086

Query: 392  DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTMIG-------- 442
              + +  +     + NAL+  Y KCG M + E +F +M   +D VSWN+MI         
Sbjct: 1087 ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELL 1146

Query: 443  --ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
              A+DL   M+Q  +  D  T A +L ACAS+A LERG E+H   +R  + +D  V +A+
Sbjct: 1147 HKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSAL 1206

Query: 500  VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
            VDMY KCG +  A   F+++P +++ SW  MI+GY  HG G  A+  F  M   G  PD 
Sbjct: 1207 VDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDH 1266

Query: 560  VS-FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            V+  + VL ACSH G V+EG+  F  M     + P++EH++CMVDLL R G L E   FI
Sbjct: 1267 VAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFI 1326

Query: 619  EMMPVAPDATIWGSLLCGC-RIH-HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
              MP+ P+  IW ++L  C R +    +L  + AE + ELEP N   YVLLAN+YA  EK
Sbjct: 1327 NSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEK 1386

Query: 677  WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
            WE+V K R  +    +KK  GCSW+ +K  V++FVAG   HP    I   L+ L  +M+ 
Sbjct: 1387 WEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRD 1446

Query: 737  EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
             GY P+T+YAL + +   KE  L  HSEK+A+AF +L   +   IR+ KNLRVCGDCH  
Sbjct: 1447 AGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSA 1505

Query: 797  AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              ++SK   R+IVLRDSNRFHHF+DG+CSC  +W
Sbjct: 1506 FGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 172/589 (29%), Positives = 279/589 (47%), Gaps = 73/589 (12%)

Query: 115  GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD-LKEGRRVFNKIDNGKVFIWNLLMHEY 173
            G ++H +I ++     D V+ + L+ M+ +C D   + R VF++I       WN ++  Y
Sbjct: 666  GVQIHGLISKTRYG-SDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVY 724

Query: 174  SKTGNFKESLYLFKKMQSLGIA----ADSYTFS--------------CVLKCL------- 208
            S+ G+   +  LF  MQ  G+      + YTF               CVL+ +       
Sbjct: 725  SRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKS 784

Query: 209  ----------AVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                      A+V    R     DA  +F+++  R+VVS N ++ G +     E   +VF
Sbjct: 785  GFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVF 844

Query: 256  KEMLNL-GFNVDLATMVTVLSGCANCGAL----MFGRAVHAFALKACFS-KEISFNNTLL 309
             EM +L G N D  + V +LS  +    L      GR VHA  ++   +  +++  N L+
Sbjct: 845  HEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 902

Query: 310  DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
            +MY+K G +  A  VFE M E+  VSW S+I+G  +    + A   F  M R G  P  +
Sbjct: 903  NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNF 962

Query: 370  AITSILHACACDGLLEIGKDVH-DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
             + S L +CA  G + +G+ +H D +K   + + + VSNAL+ +YA+ G   +   VF+ 
Sbjct: 963  TLISTLSSCASLGWIMLGEQIHCDGLKLG-LDTDVSVSNALLALYAETGCFTECLKVFSL 1021

Query: 429  MPVKDIVSWNTMIGALD-----------LFVAMLQ-NFEPDGVTMACILPACASLAALER 476
            MP  D VSWN++IGAL             F+ M++  +    VT   IL A +SL+  E 
Sbjct: 1022 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEV 1081

Query: 477  GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYG 535
              +IH  +L++ +S D  + NA++  Y KCG +     +F  M   +D +SW  MI+GY 
Sbjct: 1082 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 1141

Query: 536  MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
             +     A+     M Q G   D  +F +VL AC+    ++ G     M  + C I   +
Sbjct: 1142 HNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERG-----MEVHACGIRACM 1196

Query: 596  EHY----ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
            E      + +VD+ S+ G +  A RF E+MP+  +   W S++ G   H
Sbjct: 1197 ESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARH 1244



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 225/440 (51%), Gaps = 28/440 (6%)

Query: 220  AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
            A KLFDE+S+R++V+W C+ISGY  NG  ++    F++M+  GF  +     + L  C  
Sbjct: 598  AQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE 657

Query: 280  CG--ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD-LDGAIRVFEKMGERSVVSW 336
             G      G  +H    K  +  ++   N L+ MY  C D  + A  VF+++G R+ +SW
Sbjct: 658  SGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISW 717

Query: 337  TSMIAGYAREGVFDGAIRLFRGMVREGI----EPDVYAITSILHACACDGL---LEIGKD 389
             S+I+ Y+R G    A  LF  M +EG+    +P+ Y   S++ A AC  +   L + + 
Sbjct: 718  NSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITA-ACSSVDFGLCVLEQ 776

Query: 390  VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN-TMIG------ 442
            +   ++++     LYV +AL+  +A+ G   DA+++F QM V+++VS N  M+G      
Sbjct: 777  MLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQ 836

Query: 443  ---ALDLFVAMLQNFEPDGVTMACILPACASLAALE----RGREIHGYILRHGISADR-N 494
               A  +F  M      +  +   +L A +  + LE    +GRE+H +++R G++ ++  
Sbjct: 837  GEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVA 896

Query: 495  VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
            + N +V+MY K G +  A S+F+++  KD +SW  +I+G   +    DA  +F  MR+ G
Sbjct: 897  IGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTG 956

Query: 555  IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
              P   + IS L +C+  G +  G +  +    +  ++  +     ++ L + TG  +E 
Sbjct: 957  SMPSNFTLISTLSSCASLGWIMLGEQ-IHCDGLKLGLDTDVSVSNALLALYAETGCFTEC 1015

Query: 615  YRFIEMMPVAPDATIWGSLL 634
             +   +MP   D   W S++
Sbjct: 1016 LKVFSLMP-EYDQVSWNSVI 1034



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 198/380 (52%), Gaps = 36/380 (9%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
            R +H  ++K  F   +  +NTL+++Y + GDL  A ++F++M  R++V+W  +I+GY +
Sbjct: 563 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL--LEIGKDVHDYIKENDMQSSL 403
            G  D A   FR MVR G  P+ YA  S L AC   G    ++G  +H  I +    S +
Sbjct: 623 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682

Query: 404 YVSNALMDMYAKC-GSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ 452
            V N L+ MY  C  S  DA SVF+++ +++ +SWN++I           A DLF +M +
Sbjct: 683 VVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQK 742

Query: 453 -----NFEPDGVTM-ACILPACAS----LAALERGREIHGYILRHGISADRNVANAIVDM 502
                +F+P+  T  + I  AC+S    L  LE   ++   + + G   D  V +A+V  
Sbjct: 743 EGLGFSFKPNEYTFGSLITAACSSVDFGLCVLE---QMLARVEKSGFLQDLYVGSALVSG 799

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ-AGIEPDEVS 561
           + + G+   A+++F+ +  ++++S   ++ G      G  A   F++M+   GI  D  S
Sbjct: 800 FARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD--S 857

Query: 562 FISVLYACSHSGLVDEGWR-----FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           ++ +L A S   +++EG R       +++R   N + K+     +V++ +++G +++A  
Sbjct: 858 YVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN-DNKVAIGNGLVNMYAKSGAIADACS 916

Query: 617 FIEMMPVAPDATIWGSLLCG 636
             E+M V  D+  W SL+ G
Sbjct: 917 VFELM-VEKDSVSWNSLISG 935



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 60/99 (60%)

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           E  RE+H   +++G   +  ++N ++++YV+ G L  A+ LFD +  ++L++W  +I+GY
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
             +G   +A A F DM +AG  P+  +F S L AC  SG
Sbjct: 621 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 146/334 (43%), Gaps = 35/334 (10%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            ++N+ I  +     L KAM++++    +  ++D+ T+ ++L  CA + +LE G +VH+  
Sbjct: 1132 SWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACG 1191

Query: 123  CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              +  +  D V+GS LV M+  CG +    R F  +    V+ WN ++  Y++ G+ +++
Sbjct: 1192 IRA-CMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKA 1250

Query: 183  LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-----RDVVSWNC 237
            L LF +M   G   D    + +L  L+   +   V++  + F  +S+       V  ++C
Sbjct: 1251 LKLFTRMMLDGQPPDH--VAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSC 1308

Query: 238  MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC--ANCGALMFGRAVHAFALK 295
            M+      G A K  EV   + ++    ++    TVL  C  AN      GR      L+
Sbjct: 1309 MVDLL---GRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLE 1365

Query: 296  ACFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSV-----VSWTSMIAGY------ 343
                 + + N  LL +MY+     +   +    M E +V      SW +M  G       
Sbjct: 1366 --LEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAG 1423

Query: 344  -----AREGVFDGAIRLFRGMVREGIEPDV-YAI 371
                  ++ ++D    L R M   G  P   YA+
Sbjct: 1424 DKLHPEKDXIYDKLRELNRKMRDAGYIPQTKYAL 1457


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/735 (34%), Positives = 386/735 (52%), Gaps = 49/735 (6%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           +V  G+L   RR+F+  D   V  W  ++  YSK+  F ++  LF +M   G   D  T+
Sbjct: 84  YVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTY 143

Query: 202 SCVLKCLAVVGNSRRVKDAH--------------------------------KLFDELSD 229
             +L     +  ++ +  AH                                +LF E+  
Sbjct: 144 ITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCG 203

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
            D VS+N MI+GY  NG+ E+ +E+F EM NLGF     T   V+S         FG+ +
Sbjct: 204 WDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQI 263

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H F +K  F + +   N  LD YSK   ++   ++F +M E   VS+  +I  YA  G  
Sbjct: 264 HGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKV 323

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             +I LF+ +     +   +   ++L   A    L++G+ +H  +  +       VSN+L
Sbjct: 324 KESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSL 383

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQ-NFEPDG 458
           +DMYAKCG   +A+ +F ++  +  V W  MI A          L LF  M + N   D 
Sbjct: 384 VDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQ 443

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVAN--AIVDMYVKCGVLVLARSLF 516
            T AC+L A A+LA++  G+++H  ++R G     NV +  A++DMY  C  +  A   F
Sbjct: 444 ATFACVLKASANLASILLGKQLHSCVIRSGF---MNVYSGCALLDMYANCASIKDAIKTF 500

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           + +  +++++W  +++ Y  +G G   + +F +M  +G +PD VSF+ +L ACSH  LV+
Sbjct: 501 EEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVE 560

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           EG ++FN M    N+ PK EHY  MVD L R+G   EA + +  MP  PD  +W S+L  
Sbjct: 561 EGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNS 620

Query: 637 CRIHHEVKLAEKVAEHVFELEP-DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
           CRIH    LA K A  +F ++   +   YV ++N++AEA +W+ V K+++ +  RG++K 
Sbjct: 621 CRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKL 680

Query: 696 PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEK 755
           P  SW+EIK KV++F A    HP   +I   ++ L  +M++EGY P    A  N D+  K
Sbjct: 681 PAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESK 740

Query: 756 EVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNR 815
             +L  HSE+LA+AF ++N P G  I V KNLR C DCH   K +SK   REI +RDSNR
Sbjct: 741 IDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNR 800

Query: 816 FHHFKDGRCSCRGFW 830
           FHHF+DG CSC  +W
Sbjct: 801 FHHFRDGSCSCGDYW 815



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 234/491 (47%), Gaps = 47/491 (9%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S+ D  TY ++L  C DL+  ++  + H+ I + G  ++  V  + L   F T G L   
Sbjct: 136 SQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKT-GGLDSA 194

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-- 209
           RR+F ++       +N+++  Y+  G  +E++ LF +MQ+LG     +TF+ V+      
Sbjct: 195 RRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGL 254

Query: 210 ----------------------VVGNSRR--------VKDAHKLFDELSDRDVVSWNCMI 239
                                  VGN+          V +  KLF+E+ + D VS+N +I
Sbjct: 255 DDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVII 314

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           + Y   G  ++ +++F+E+    F+       T+LS  A+   L  GR +HA  + +   
Sbjct: 315 TAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMAD 374

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +   +N+L+DMY+KCG  + A R+F ++  RS V WT+MI+   + G+ +  ++LF  M
Sbjct: 375 PDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEM 434

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
            R  +  D      +L A A    + +GK +H  +  +    ++Y   AL+DMYA C S+
Sbjct: 435 RRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFM-NVYSGCALLDMYANCASI 493

Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPAC 468
            DA   F +M  +++V+WN ++          G L  F  M+ + ++PD V+  CIL AC
Sbjct: 494 KDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTAC 553

Query: 469 ASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLIS 526
           +    +E G +  +     + ++  R    A+VD   + G    A  L   +P   D I 
Sbjct: 554 SHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIV 613

Query: 527 WTIMIAGYGMH 537
           WT ++    +H
Sbjct: 614 WTSVLNSCRIH 624



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 137/541 (25%), Positives = 243/541 (44%), Gaps = 33/541 (6%)

Query: 144 TCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
           TC D +  +  F+ I +     +N ++ + S+ G   ++  L  +M +     +S++   
Sbjct: 28  TCIDARIVKTGFDPITSR----FNFMIKDLSERGQLCQARQLLDQMPN----RNSFSIDI 79

Query: 204 VLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
           ++      GN   +  A ++FD+  +R VV+W  MI  Y  +       ++F EM   G 
Sbjct: 80  IISGYVKSGN---LTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGS 136

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             D  T +T+L+GC +          HA  +K          NTLLD Y K G LD A R
Sbjct: 137 QPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARR 196

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           +F +M     VS+  MI GYA  G+ + AI LF  M   G +P  +   +++ A      
Sbjct: 197 LFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDD 256

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
              G+ +H ++ +     +++V NA +D Y+K   + +   +FN+MP  D VS+N +I A
Sbjct: 257 TAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITA 316

Query: 444 ----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                     +DLF  +    F+        +L   AS   L+ GR++H  ++      D
Sbjct: 317 YAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPD 376

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             V+N++VDMY KCG    A  +F  + ++  + WT MI+     G   + +  F +MR+
Sbjct: 377 FRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRR 436

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY---ACMVDLLSRTG 609
           A +  D+ +F  VL A ++   +  G +      + C I     +      ++D+ +   
Sbjct: 437 ANVSADQATFACVLKASANLASILLGKQL-----HSCVIRSGFMNVYSGCALLDMYANCA 491

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF--ELEPDNTGYYVLL 667
           ++ +A +  E M    +   W +LL     + + K   K  E +     +PD+  +  +L
Sbjct: 492 SIKDAIKTFEEMS-ERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCIL 550

Query: 668 A 668
            
Sbjct: 551 T 551


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 239/628 (38%), Positives = 368/628 (58%), Gaps = 14/628 (2%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVL 274
           + +A  +F   ++++VVSWN M+ G+ A G      +V ++ML  G +V  D  T++  +
Sbjct: 93  ITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAV 152

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             C +   L   + +H ++LK  F       N  +  Y+KCG L  A RVF  +  ++V 
Sbjct: 153 PVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 212

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW ++I G+A+      ++     M   G+ PD + + S+L AC+    L +GK+VH +I
Sbjct: 213 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 272

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
             N ++  L+V  +++ +Y  CG +   +++F+ M  K +VSWNT+I           AL
Sbjct: 273 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 332

Query: 445 DLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            +F  M L   +  G++M  +  AC+ L +L  GRE H Y L+H +  D  +A +++DMY
Sbjct: 333 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 392

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            K G +  +  +F+ +  K   SW  MI GYG+HG   +AI  F +M++ G  PD+++F+
Sbjct: 393 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 452

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI-EMMP 622
            VL AC+HSGL+ EG R+ + M+    ++P L+HYAC++D+L R G L +A R + E M 
Sbjct: 453 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 512

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
              D  IW SLL  CRIH  +++ EKVA  +FELEP+    YVLL+N+YA   KWE+V+K
Sbjct: 513 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 572

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R++++   L+K+ GCSWIE+  KV  FV G       ++I+SL   L +++ + GY P 
Sbjct: 573 VRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPD 632

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           T     +  E EK   L GHSEKLA+ +G++    G TIRV KNLR+C DCH  AK +SK
Sbjct: 633 TMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISK 692

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REIV+RD+ RFHHFK+G CSC  +W
Sbjct: 693 VMEREIVVRDNKRFHHFKNGVCSCGDYW 720



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/491 (30%), Positives = 250/491 (50%), Gaps = 33/491 (6%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEML----NLGFNVDLATMVTVLSGCANCGALMF 285
           R+ VSWN MI  +  NG +E+   +  EM+    +  F  D+AT+VTVL  CA    +  
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ VH +A+K    KE+  NN L+DMYSKCG +  A  +F+    ++VVSW +M+ G++ 
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 346 EGVFDGAIRLFRGMVR--EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
           EG   G   + R M+   E ++ D   I + +  C  +  L   K++H Y  + +   + 
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQ 452
            V+NA +  YAKCGS++ A+ VF+ +  K + SWN +IG          +LD  + M + 
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
              PD  T+  +L AC+ L +L  G+E+HG+I+R+ +  D  V  +++ +Y+ CG L   
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 300

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS-- 570
           ++LFD +  K L+SW  +I GY  +GF   A+  F  M   GI+   +S + V  ACS  
Sbjct: 301 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 360

Query: 571 ---HSGLVDEGWRFFNMMRYECNIEPKLEHYAC-MVDLLSRTGNLSEAYRFIEMMPVAPD 626
                G     +   +++  +  I       AC ++D+ ++ G+++++ +    +     
Sbjct: 361 PSLRLGREAHAYALKHLLEDDAFI-------ACSLIDMYAKNGSITQSSKVFNGLKEKST 413

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           A+ W +++ G  IH   K A K+ E +      PD+  +  +L          E ++ L 
Sbjct: 414 AS-WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLD 472

Query: 685 EKISRRGLKKN 695
           +  S  GLK N
Sbjct: 473 QMKSSFGLKPN 483



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 40/418 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS----SEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++N  +G F   G+     +VL       E  K D  T  + + +C     L   K++H 
Sbjct: 110 SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 169

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              +   V ++ ++ +  V  +  CG L   +RVF+ I +  V  WN L+  ++++ + +
Sbjct: 170 YSLKQEFVYNE-LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 228

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------- 221
            SL    +M+  G+  DS+T   +L   + + + R  K+ H                   
Sbjct: 229 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 288

Query: 222 -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                         LFD + D+ +VSWN +I+GY+ NG  ++ L VF++M+  G  +   
Sbjct: 289 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 348

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           +M+ V   C+   +L  GR  HA+ALK     +     +L+DMY+K G +  + +VF  +
Sbjct: 349 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 408

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            E+S  SW +MI GY   G+   AI+LF  M R G  PD      +L AC   GL+  G 
Sbjct: 409 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 468

Query: 389 DVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK--DIVSWNTMIGA 443
              D +K +  ++ +L     ++DM  + G +  A  V  +   +  D+  W +++ +
Sbjct: 469 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 526



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 236/526 (44%), Gaps = 56/526 (10%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID-DGVLGSKLVFMFVTCGDLKEGRR 153
           D  T  ++L +CA  + +  GK VH    +  + +D + VL + L+ M+  CG +   + 
Sbjct: 41  DVATLVTVLPVCAREREIGLGKGVHGWAVK--LRLDKELVLNNALMDMYSKCGCITNAQM 98

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG--IAADSYT----------- 200
           +F   +N  V  WN ++  +S  G+   +  + ++M + G  + AD  T           
Sbjct: 99  IFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHE 158

Query: 201 -FSCVLKCL------------AVVGNS--------RRVKDAHKLFDELSDRDVVSWNCMI 239
            F   LK L             +V N+          +  A ++F  +  + V SWN +I
Sbjct: 159 SFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI 218

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
            G+  +      L+   +M   G   D  T+ ++LS C+   +L  G+ VH F ++    
Sbjct: 219 GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 278

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
           +++    ++L +Y  CG+L     +F+ M ++S+VSW ++I GY + G  D A+ +FR M
Sbjct: 279 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 338

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           V  GI+    ++  +  AC+    L +G++ H Y  ++ ++   +++ +L+DMYAK GS+
Sbjct: 339 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 398

Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPAC 468
             +  VFN +  K   SWN MI           A+ LF  M +    PD +T   +L AC
Sbjct: 399 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 458

Query: 469 ASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF--DMIPAKDLI 525
                +  G R +       G+  +      ++DM  + G L  A  +   +M    D+ 
Sbjct: 459 NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 518

Query: 526 SWTIMIAGYGMHG---FGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
            W  +++   +H     G    A   ++     +P+    +S LYA
Sbjct: 519 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPE--KPENYVLLSNLYA 562



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 27/300 (9%)

Query: 46  CTINPI-SASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEV-----LYSSEKSKIDTKTY 99
           CT+  +  A   K+LV    ++N  I  + + G  ++A+ V     LY  +   I   + 
Sbjct: 298 CTVQALFDAMEDKSLV----SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI---SM 350

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
             +   C+ L SL  G++ H+   +  ++ DD  +   L+ M+   G + +  +VFN + 
Sbjct: 351 MPVFGACSLLPSLRLGREAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK 409

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
                 WN ++  Y   G  KE++ LF++MQ  G   D  TF   L  L    +S  + +
Sbjct: 410 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF---LGVLTACNHSGLIHE 466

Query: 220 AHKLFDELSDR-----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             +  D++        ++  + C+I      G  +K L V  E   +    D+    ++L
Sbjct: 467 GLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE--EMSEEADVGIWKSLL 524

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSV 333
           S C     L  G  V A   +     E   N  LL ++Y+  G  +   +V ++M E S+
Sbjct: 525 SSCRIHQNLEMGEKVAAKLFE--LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSL 582


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/708 (34%), Positives = 393/708 (55%), Gaps = 28/708 (3%)

Query: 147 DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
           D++E   +  +    +  ++  L+H   +TG+   +  +   M   G +AD +  + ++ 
Sbjct: 62  DVQEAMTMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVN 121

Query: 207 CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                  +R   DA +LFD + +R+VV+W  +++GY  N     GLEVF EML +G    
Sbjct: 122 AYMRCSAAR---DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPS 178

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             T+   L+ C     +  G+ VH +A+K       S  N+L  +Y+K G LD A+R F 
Sbjct: 179 HYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFW 238

Query: 327 KMGERSVVSWTSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++ E++V++WT+MI+  A  E   +  + LF  M+ +G+ P+ + +TS++  C     L 
Sbjct: 239 RIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLN 298

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
           +GK V  +  +   +++L V N+ M +Y + G   +A  +F QM    I++WN MI    
Sbjct: 299 LGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYA 358

Query: 443 ------------------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGY 483
                             AL +F  + ++  +PD  T + IL  C+++ ALE+G +IH  
Sbjct: 359 QIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQ 418

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
            ++ G  +D  V +A+V+MY KCG +  A   F  +P +  ++WT MI+GY  HG   +A
Sbjct: 419 TIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEA 478

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           I  F +MR AG+ P+E++F+S+L ACS++GLV+E   +F+MM+ E  IEP ++HY CM+D
Sbjct: 479 IQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMID 538

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY 663
           +  R G + +A+ FI+     P+  IW SL+ GCR H  ++LA   A+ + EL+P     
Sbjct: 539 MFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIET 598

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
           Y+LL N+Y   E+W++V ++R+ + +  +      SWI IK KV  F A   +HP A ++
Sbjct: 599 YILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATEL 658

Query: 724 ESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA--LCGHSEKLAMAFGILNLPAGQTI 781
             LL+ L  + K  GY P     L ++++ EK  A  L  HSE+LA+A G+L  P G T+
Sbjct: 659 YQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATV 718

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           RVTKN+ +C DCH   K  S    REI++RDS R H FKDGRCSC  F
Sbjct: 719 RVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 242/524 (46%), Gaps = 72/524 (13%)

Query: 78  NLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
           ++++AM +L  +E   + +  Y  +L  C +  SL   + VH  + ++G   D  V  + 
Sbjct: 62  DVQEAMTML--TEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFV-ATS 118

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           LV  ++ C   ++ RR+F+ +    V  W  L+  Y+        L +F +M  +G    
Sbjct: 119 LVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPS 178

Query: 198 SYTFSCVLK-CLA-----------------------VVGNSR--------RVKDAHKLFD 225
            YT    L  CLA                        +GNS          +  A + F 
Sbjct: 179 HYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFW 238

Query: 226 ELSDRDVVSWNCMISGYIAN-GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALM 284
            + +++V++W  MIS    +    E G+ +F +ML  G   +  T+ +V+S C     L 
Sbjct: 239 RIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLN 298

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            G+ V AF+ K      +   N+ + +Y + G+ D A+R+FE+M + S+++W +MI+GYA
Sbjct: 299 LGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYA 358

Query: 345 REGVFDG-------------AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           +  + D              A+ +FR + R  ++PD++  +SIL  C+    LE G+ +H
Sbjct: 359 Q--IMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIH 416

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
               ++   S + V++AL++MY KCG + DA   F +MP +  V+W +MI          
Sbjct: 417 AQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 476

Query: 443 -ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAI 499
            A+ LF  M L    P+ +T   +L AC+    +E        + + + I    +    +
Sbjct: 477 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCM 536

Query: 500 VDMYVKCGVL-----VLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           +DM+V+ G +      + R+ F+  P + +  W+ ++AG   HG
Sbjct: 537 IDMFVRLGRVEDAFSFIKRTGFE--PNEAI--WSSLVAGCRSHG 576



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 17/248 (6%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T+ SIL +C+ + +LE G+++H+   +SG  + D V+ S LV M+  CG +++  
Sbjct: 390 KPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGF-LSDVVVNSALVNMYNKCGCIQDAN 448

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           + F ++       W  ++  YS+ G  +E++ LF++M+  G+  +  TF  +L   +  G
Sbjct: 449 KAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAG 508

Query: 213 NSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
               V++A   FD +     +      + CMI  ++  G  E      K     GF  + 
Sbjct: 509 ---LVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRT---GFEPNE 562

Query: 268 ATMVTVLSGCANCG--ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           A   ++++GC + G   L F  A     LK    K I     LL+MY          RV 
Sbjct: 563 AIWSSLVAGCRSHGNMELAFYAADKLLELKP---KGIETYILLLNMYISTERWQDVARVR 619

Query: 326 EKMGERSV 333
           + M +  V
Sbjct: 620 KLMKQEDV 627


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/628 (38%), Positives = 374/628 (59%), Gaps = 23/628 (3%)

Query: 220  AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
            A+K+FD + +R+VVSW  ++SG++ NG     L +F EM   G   +  T  T L  C  
Sbjct: 423  AYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGL 482

Query: 280  CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              AL  G  +H F LK  F   +   N+L+DMYSKCG ++ A +VF  M  RS++SW +M
Sbjct: 483  LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAM 542

Query: 340  IAGYAREGVFDGAIRLFRGMVREGI---EPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            IAGY   G    A+  F GM++E      PD + +TS+L AC+  G++  GK +H ++  
Sbjct: 543  IAGYVHAGYGSRALATF-GMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 601

Query: 397  NDMQ--SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GAL 444
            +     SS  ++ +L+D+Y KCG++  A   F+Q+  K ++SW+++I           A+
Sbjct: 602  SGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAM 661

Query: 445  DLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
             LF  + + + + D   ++ I+   A  A L++G+++   +++     + +V+N++VDMY
Sbjct: 662  GLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMY 721

Query: 504  VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            +KCG++  A   F  +  KD+ISWT+MI GYG HG G  A++ FN M +  IEPDEV ++
Sbjct: 722  LKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYL 781

Query: 564  SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +VL ACSHSG++ EG   F+ +     I+P++EHYAC+VDLL R G L EA   ++ MP+
Sbjct: 782  AVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPI 841

Query: 624  APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
             P+  IW +LL  CR+H +++L ++V + +  ++  N   YV+++N+Y +A  W E    
Sbjct: 842  KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMSNLYGQAGYWNEQGNA 901

Query: 684  REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE-GYFPK 742
            RE  S +GL+K  G SW+EI+ +V+ F +G  SHP    I+  LK +   ++ E GY   
Sbjct: 902  RELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLVIQETLKEVERRLREELGYVYG 961

Query: 743  TRYALINADEMEKEVALCGHSEK----LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
             ++ L + D+  KE  L  HSEK    LA+A G LN   G+TIRV KNLRVC DCHE  K
Sbjct: 962  LKHELHDIDDESKEENLRAHSEKLAIGLALATGGLN-QKGKTIRVFKNLRVCVDCHEFIK 1020

Query: 799  FMSKTARREIVLRDSNRFHHFKDGRCSC 826
             +SK  +   V+RD+ RFH F+DG CSC
Sbjct: 1021 GLSKITKIAYVVRDAVRFHSFEDGCCSC 1048



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 179/382 (46%), Gaps = 39/382 (10%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ + L+ C  L +LE G ++H    + G  +   V G+ LV M+  CG + E  +VF  
Sbjct: 472 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV-GNSLVDMYSKCGRINEAEKVFRW 530

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA--ADSYTFSCVLKCLAVVGNSR 215
           +    +  WN ++  Y   G    +L  F  MQ   I    D +T + +LK  +  G   
Sbjct: 531 MVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIY 590

Query: 216 RVKDAH----------------------------------KLFDELSDRDVVSWNCMISG 241
             K  H                                  K FD++ ++ ++SW+ +I G
Sbjct: 591 AGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILG 650

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y   G   + + +FK +  L   +D   + +++   A+   L  G+ + A  +K     E
Sbjct: 651 YAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLE 710

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
            S +N+L+DMY KCG +D A + F +M  + V+SWT MI GY + G+   A+ +F  M+R
Sbjct: 711 TSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLR 770

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND-MQSSLYVSNALMDMYAKCGSMA 420
             IEPD     ++L AC+  G+++ G+++   + E   ++  +     ++D+  + G + 
Sbjct: 771 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLK 830

Query: 421 DAESVFNQMPVKDIVS-WNTMI 441
           +A+ + + MP+K  V  W T++
Sbjct: 831 EAKHLVDTMPIKPNVGIWQTLL 852



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 158/355 (44%), Gaps = 40/355 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI----DTKTYCSILQLCADLKSLEDGKKVHS 120
           ++NA I  +   G   +A+      +++KI    D  T  S+L+ C+    +  GK++H 
Sbjct: 538 SWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 597

Query: 121 IICESGI-VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
            +  SG        +   LV ++V CG+L   R+ F++I    +  W+ L+  Y++ G+F
Sbjct: 598 FLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDF 657

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR 215
            E++ LFK++Q L    DS+  S ++   A                         V NS 
Sbjct: 658 VEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSL 717

Query: 216 --------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                    V +A K F E+  +DV+SW  MI+GY  +G+ +K + +F +ML      D 
Sbjct: 718 VDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDE 777

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
              + VLS C++ G +  G  + +  L+       +     ++D+  + G L  A  + +
Sbjct: 778 VCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVD 837

Query: 327 KMGERSVVS-WTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACA 379
            M  +  V  W ++++     G  +    + + ++R +G  P  Y + S L+  A
Sbjct: 838 TMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMSNLYGQA 892


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/571 (39%), Positives = 346/571 (60%), Gaps = 13/571 (2%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L+ C N  A+  G+ VHA  +K C+   +  +  L+ +Y+KC  L  A  VF++M ER+
Sbjct: 16  LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN 75

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           VVSWT+MI+GY++ G    A+ LF  M+R   EP+ +   ++L +C      E+G+ +H 
Sbjct: 76  VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHS 135

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           +I + + ++ ++V ++L+DMYAK G + +A  VF  +P +D+VS   +I           
Sbjct: 136 HIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEE 195

Query: 443 ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           AL+LF  +  +    + VT A +L A + LAAL+ G+++H ++LR  +     + N+++D
Sbjct: 196 ALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLID 255

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-IEPDEV 560
           MY KCG L  AR +F+ +P + +ISW  M+ GY  HG G + +  F  MR+   ++PD V
Sbjct: 256 MYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSV 315

Query: 561 SFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           +F++VL  CSH GL D+G   F+ MM     IE  +EHY C++DLL R G + EA+  I+
Sbjct: 316 TFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIK 375

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP  P A IWGSLL  CR+H    + E V   + E+EP+N G YV+L+N+YA A +WE+
Sbjct: 376 KMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWED 435

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V+ +RE +  + + K PG SWIE+   ++ F A   SHP  +++   ++ L ++ K  GY
Sbjct: 436 VRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGY 495

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P     L + DE +KE  L GHSEKLA+AFG+++   G  +RV KNLR+C DCH  AKF
Sbjct: 496 VPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKF 555

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +SK   R++ +RD NRFHH   G CSC  +W
Sbjct: 556 VSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 184/367 (50%), Gaps = 20/367 (5%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +FDE+ +R+VVSW  MISGY   G A + L +F +ML      +  T  TVLS C  
Sbjct: 64  ARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTG 123

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
                 GR +H+   K  +   I   ++LLDMY+K G +  A  VFE + ER VVS T++
Sbjct: 124 FSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAI 183

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I+GYA+ G+ + A+ LF  + REG+  +     S+L A +    L+ GK VH ++   ++
Sbjct: 184 ISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCEL 243

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM----------IGALDLFVA 449
              + + N+L+DMY+KCG++  A  +FN MPV+ ++SWN M          I  + LF  
Sbjct: 244 PFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKL 303

Query: 450 MLQ--NFEPDGVTMACILPACASLAALERGREIHGYILRHG--ISADRNVANAIVDMYVK 505
           M +    +PD VT   +L  C+     ++G E+   ++  G  I A       ++D+  +
Sbjct: 304 MREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGR 363

Query: 506 CGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS--- 561
            G +  A  L   +P +   + W  ++    +H      I  F   R   IEP+      
Sbjct: 364 AGRVEEAFELIKKMPFEPTAAIWGSLLGACRVH--SNTNIGEFVGCRLLEIEPENAGNYV 421

Query: 562 FISVLYA 568
            +S LYA
Sbjct: 422 ILSNLYA 428



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 194/390 (49%), Gaps = 37/390 (9%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           +  +I    Y  +L  C + +++ +G++VH+ + ++   +    L ++L+ ++  C  L 
Sbjct: 4   QGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKT-CYLPPVYLSTRLIILYTKCECLG 62

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-- 207
             R VF+++    V  W  ++  YS+ G   E+L+LF +M       + +TF+ VL    
Sbjct: 63  CARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCT 122

Query: 208 ------------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNC 237
                                         L +   + R+ +A  +F+ L +RDVVS   
Sbjct: 123 GFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTA 182

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +ISGY   G+ E+ LE+F  +   G + +  T  ++L+  +   AL  G+ VH+  L+  
Sbjct: 183 IISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCE 242

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
               +   N+L+DMYSKCG+L+ A ++F  M  R+V+SW +M+ GY++ G     ++LF+
Sbjct: 243 LPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFK 302

Query: 358 GMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKE--NDMQSSLYVSNALMDMYA 414
            M  E  ++PD     ++L  C+  GL + G ++ D +    +++++ +     ++D+  
Sbjct: 303 LMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLG 362

Query: 415 KCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
           + G + +A  +  +MP +   + W +++GA
Sbjct: 363 RAGRVEEAFELIKKMPFEPTAAIWGSLLGA 392



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 165/325 (50%), Gaps = 18/325 (5%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M  +G E        +L+ C     +  G+ VH ++ +      +Y+S  L+ +Y KC  
Sbjct: 1   MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPA 467
           +  A  VF++M  +++VSW  MI           AL LFV ML+ + EP+  T A +L +
Sbjct: 61  LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C   +  E GR+IH +I +        V ++++DMY K G +  AR +F+ +P +D++S 
Sbjct: 121 CTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSC 180

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMR 586
           T +I+GY   G   +A+  F  +++ G+  + V++ S+L A S    +D G +   +++R
Sbjct: 181 TAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLR 240

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH---EV 643
            E      L++   ++D+ S+ GNL+ A +    MPV    + W ++L G   H    EV
Sbjct: 241 CELPFYVVLQN--SLIDMYSKCGNLNYARKIFNNMPVRTVIS-WNAMLVGYSKHGKGIEV 297

Query: 644 KLAEKVAEHVFELEPDNTGYYVLLA 668
               K+     +++PD+  +  +L+
Sbjct: 298 VKLFKLMREENKVKPDSVTFLAVLS 322



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 28/290 (9%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII-- 122
            A I  + ++G  E+A+E+    ++  + +   TY S+L   + L +L+ GK+VHS +  
Sbjct: 181 TAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLR 240

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
           CE    +   VL + L+ M+  CG+L   R++FN +    V  WN ++  YSK G   E 
Sbjct: 241 CELPFYV---VLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEV 297

Query: 183 LYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS------DRDVVSW 235
           + LFK M+    +  DS TF  VL   +  G   +     ++FDE+       +  +  +
Sbjct: 298 VKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDK---GLEMFDEMMNGGDEIEAGIEHY 354

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
            C+I      G  E+  E+ K+M    F    A   ++L  C        G  V    L+
Sbjct: 355 GCVIDLLGRAGRVEEAFELIKKM---PFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLE 411

Query: 296 ACFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSVV-----SWTSM 339
                E + N  +L ++Y+  G  +    V E M E++V+     SW  +
Sbjct: 412 --IEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIEL 459


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/764 (33%), Positives = 401/764 (52%), Gaps = 87/764 (11%)

Query: 79  LEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           L +A++ LYS  +   ++++Y  +L  C     +   K++ + +        D  L ++L
Sbjct: 7   LREAIDALYS--RGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRL 64

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS 198
           + ++   G+L + R +F+K+    VF WN ++  YSK+GN                    
Sbjct: 65  LHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGN-------------------- 104

Query: 199 YTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
                             V+D   +FD++S  D VS+N +I+G+  NG + + LE F  M
Sbjct: 105 ------------------VEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRM 146

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
              GF     T V+VL  C+    +  G+ +H   +     + +   N L +MY+KCG L
Sbjct: 147 QEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGAL 206

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
           D A  +F++M  ++VVSW SMI+GY + G  +   +LF  M   G+ PD   I++IL A 
Sbjct: 207 DQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA- 265

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
                                             Y +CG + +A   F ++  KD V W 
Sbjct: 266 ----------------------------------YFQCGYIDEACKTFREIKEKDKVCWT 291

Query: 439 TMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRH 487
           TM+           AL LF  M L+N  PD  T++ ++ +CA LA+L +G+ +HG  +  
Sbjct: 292 TMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIF 351

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           G+  D  V++A+VDMY KCG    A  +F  +  +++ISW  MI GY  +G   +A+A +
Sbjct: 352 GVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALY 411

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
            +M    ++PD ++F+ VL AC H+GLV+ G  +F  +     + P  +HY+CM++LL R
Sbjct: 412 EEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGR 471

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            G + +A   I+ M   P+  IW +LL  CRI+ +V   E  A H+FEL+P N G Y++L
Sbjct: 472 AGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIML 531

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLL 727
           +N+YA   +W++V  +R  +    +KK    SWIEI  +V+ FVA   +H   ++I   L
Sbjct: 532 SNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEEL 591

Query: 728 KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT-IRVTKN 786
            RL  +++  G+ P T   L +  E EK  ++C HSEKLA+AF ++  P G+T IR+ KN
Sbjct: 592 NRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKN 651

Query: 787 LRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +RVCGDCH   KF+SK  RR I+LRD NRFHHF +GRCSC+  W
Sbjct: 652 IRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 200/402 (49%), Gaps = 8/402 (1%)

Query: 45  SCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSI 102
           S  +  + A   +  V    +YN  I  F   G   +A+E     ++   ++   T+ S+
Sbjct: 102 SGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSV 161

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           L  C+ L  ++ GK++H  I  + +  +   + + L  M+  CG L + R +F+++ N  
Sbjct: 162 LHACSQLLDIKRGKQIHGRIVATSLG-ESVFVWNALTNMYAKCGALDQARWLFDRMVNKN 220

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           V  WN ++  Y + G  +    LF +MQS G+  D  T S +L      G    + +A K
Sbjct: 221 VVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCG---YIDEACK 277

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
            F E+ ++D V W  M+ G   NG  E  L +F+EML      D  T+ +V+S CA   +
Sbjct: 278 TFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLAS 337

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G+AVH  A+      ++  ++ L+DMYSKCG+   A  VF++M  R+V+SW SMI G
Sbjct: 338 LCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILG 397

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQS 401
           YA+ G    A+ L+  M+ E ++PD      +L AC   GL+E G+     I K + M  
Sbjct: 398 YAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNP 457

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIG 442
           +    + ++++  + G M  A  +   M  + + + W+T++ 
Sbjct: 458 TFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/708 (34%), Positives = 392/708 (55%), Gaps = 28/708 (3%)

Query: 147 DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
           D++E   +  +    +  ++  L+H   + G+   +  +   M   G  AD +  + ++ 
Sbjct: 62  DVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVN 121

Query: 207 CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                G +R   DA +LFD + +R+VV+W  +++GY  N     GLEVF EML +G    
Sbjct: 122 AYMRCGAAR---DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPS 178

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             T+   L+ C     +  G+ VH +A+K       S  N+L  +Y+K G LD A+R F 
Sbjct: 179 HYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFW 238

Query: 327 KMGERSVVSWTSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++ E++V++WT+MI+  A  E   +  + LF  M+ +G+ P+ + +TS++  C     L 
Sbjct: 239 RIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLN 298

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
           +GK V  +  +   +++L V N+ M +Y + G   +A  +F QM    I++WN MI    
Sbjct: 299 LGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYA 358

Query: 443 ------------------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGY 483
                             AL +F  + ++  +PD  T + IL  C+++ ALE+G +IH  
Sbjct: 359 QIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQ 418

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
            ++ G  +D  V +A+V+MY KCG +  A   F  +P +  ++WT MI+GY  HG   +A
Sbjct: 419 TIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEA 478

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           I  F +MR AG+ P+E++F+S+L ACS++GLV+E   +F+MM+ E  IEP ++HY CM+D
Sbjct: 479 IQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMID 538

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY 663
           +  R G + +A+ FI+     P+  IW SL+ GCR H  ++LA   A+ + EL+P     
Sbjct: 539 MFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIET 598

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
           Y+LL N+Y   E+W++V ++R+ + +  +      SWI IK KV  F A   +HP A ++
Sbjct: 599 YILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATEL 658

Query: 724 ESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA--LCGHSEKLAMAFGILNLPAGQTI 781
             LL+ L  + K  GY P     L ++++ EK  A  L  HSE+LA+A G+L  P G T+
Sbjct: 659 YQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATV 718

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           RVTKN+ +C DCH   K  S    REI++RDS R H FKDGRCSC  F
Sbjct: 719 RVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 244/524 (46%), Gaps = 72/524 (13%)

Query: 78  NLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
           ++++AM +L  +E   + +  Y  +L  C ++ SL   + VH  + ++G   D  V  + 
Sbjct: 62  DVQEAMTML--TEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFV-ATS 118

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           LV  ++ CG  ++ RR+F+ +    V  W  L+  Y+        L +F +M  +G    
Sbjct: 119 LVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPS 178

Query: 198 SYTFSCVLK-CLA-----------------------VVGNSR--------RVKDAHKLFD 225
            YT    L  CLA                        +GNS          +  A + F 
Sbjct: 179 HYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFW 238

Query: 226 ELSDRDVVSWNCMISGYIAN-GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALM 284
            + +++V++W  MIS    +    E GL +F +ML  G   +  T+ +V+S C     L 
Sbjct: 239 RIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLN 298

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            G+ V AF+ K      +   N+ + +Y + G+ D A+R+FE+M + S+++W +MI+GYA
Sbjct: 299 LGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYA 358

Query: 345 REGVFDG-------------AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           +  + D              A+ +FR + R  ++PD++  +SIL  C+    LE G+ +H
Sbjct: 359 Q--IMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIH 416

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
               ++   S + V++AL++MY KCG + DA   F +MP +  V+W +MI          
Sbjct: 417 AQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 476

Query: 443 -ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAI 499
            A+ LF  M L    P+ +T   +L AC+    +E        + + + I    +    +
Sbjct: 477 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCM 536

Query: 500 VDMYVKCGVL-----VLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           +DM+V+ G +      + R+ F+  P + +  W+ ++AG   HG
Sbjct: 537 IDMFVRLGRVEDAFSFIKRTGFE--PNEAI--WSSLVAGCRSHG 576



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 17/248 (6%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T+ SIL +C+ + +LE G+++H+   +SG  + D V+ S LV M+  CG +++  
Sbjct: 390 KPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGF-LSDVVVNSALVNMYNKCGCIQDAN 448

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           + F ++       W  ++  YS+ G  +E++ LF++M+  G+  +  TF  +L   +  G
Sbjct: 449 KAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAG 508

Query: 213 NSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
               V++A   FD +     +      + CMI  ++  G  E      K     GF  + 
Sbjct: 509 ---LVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRT---GFEPNE 562

Query: 268 ATMVTVLSGCANCG--ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           A   ++++GC + G   L F  A     LK    K I     LL+MY          RV 
Sbjct: 563 AIWSSLVAGCRSHGNMELAFYAADKLLELKP---KGIETYILLLNMYISTERWQDVARVR 619

Query: 326 EKMGERSV 333
           + M +  V
Sbjct: 620 KLMKQEDV 627


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/704 (33%), Positives = 394/704 (55%), Gaps = 46/704 (6%)

Query: 82  AMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIV----IDDGVLGSK 137
           AM + ++ ++  +      +         +L + + +H+++   G             S+
Sbjct: 13  AMLITFTRQQHSLPIHFTVTSFHRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQ 72

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           LV ++V  G L+     F  + +  +  WN ++      G+F ++++ +  M   G+  D
Sbjct: 73  LVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPD 132

Query: 198 SYTFSCVLKCLAVV--------------GNSR-----------------RVKDAHKLFDE 226
           +YT+  VLK  + +              G ++                  V+DA ++F+E
Sbjct: 133 NYTYPLVLKACSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEE 192

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           + DRD+ SW  +I G + NG   + L +F++M + G   D   + ++L  C    A+  G
Sbjct: 193 MPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLG 252

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
            A+   A+++ F  ++  +N ++DMY KCGD   A RVF  M    VVSW+++IAGY++ 
Sbjct: 253 MALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQN 312

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
            ++  + +L+ GM+  G+  +    TS+L A     LL+ GK++H+++ +  + S + V 
Sbjct: 313 CLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVG 372

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL---FVAMLQNFE-------- 455
           +AL+ MYA CGS+ +AES+F     KDI+ WN+MI   +L   F +    F         
Sbjct: 373 SALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHR 432

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           P+ +T+  ILP C  + AL +G+EIHGY+ + G+  + +V N+++DMY KCG L L   +
Sbjct: 433 PNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKV 492

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           F  +  +++ ++  MI+  G HG G   +A +  M++ G  P++V+FIS+L ACSH+GL+
Sbjct: 493 FKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLL 552

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           D GW  +N M  +  IEP +EHY+CMVDL+ R G+L  AY+FI  MP+ PDA ++GSLL 
Sbjct: 553 DRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLG 612

Query: 636 GCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
            CR+H++V+L E +AE + +L+ D++G+YVLL+N+YA  ++WE++ K+R  I  +GL+K 
Sbjct: 613 ACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKK 672

Query: 696 PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           PG SWI++   + +F A  + HP   KIE  L  L L MK E Y
Sbjct: 673 PGSSWIQVGHCIYVFHATSAFHPAFAKIEETLNSLLLVMKSEDY 716



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 235/504 (46%), Gaps = 54/504 (10%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA +     VG+  KA+   +S  +  +  D  TY  +L+ C+ L +L+ G+ VH  + 
Sbjct: 101 WNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHETM- 159

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             G    +  +   ++ MF  CG +++ RR+F ++ +  +  W  L+      G   E+L
Sbjct: 160 -HGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEAL 218

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK------------------------- 218
            LF+KM+S G+  DS   + +L      G    VK                         
Sbjct: 219 LLFRKMRSEGLMPDSVIVASILPA---CGRLEAVKLGMALQVCAVRSGFESDLYVSNAVI 275

Query: 219 ----------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                     +AH++F  +   DVVSW+ +I+GY  N + ++  +++  M+N+G   +  
Sbjct: 276 DMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAI 335

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
              +VL        L  G+ +H F LK     ++   + L+ MY+ CG +  A  +FE  
Sbjct: 336 VATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECT 395

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            ++ ++ W SMI GY   G F+ A   FR +      P+   + SIL  C   G L  GK
Sbjct: 396 SDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGK 455

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----- 443
           ++H Y+ ++ +  ++ V N+L+DMY+KCG +   E VF QM V+++ ++NTMI A     
Sbjct: 456 EIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHG 515

Query: 444 -----LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVA 496
                L  +  M  +   P+ VT   +L AC+    L+RG  ++  ++  +GI  +    
Sbjct: 516 QGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHY 575

Query: 497 NAIVDMYVKCGVLVLARSLFDMIP 520
           + +VD+  + G L  A      +P
Sbjct: 576 SCMVDLIGRAGDLDGAYKFITRMP 599


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/724 (35%), Positives = 386/724 (53%), Gaps = 54/724 (7%)

Query: 158  IDNG-KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--------- 207
             D G  +F WN  + E+   G    ++  FK +    I  DS T   +L           
Sbjct: 853  FDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDL 912

Query: 208  ---------------LAVVGNSRR--------VKDAHKLFDELSDRDVVSWNCMISGYIA 244
                           +  V NS          V  A K F    + D++SWN MIS Y  
Sbjct: 913  GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ 972

Query: 245  NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA---LMFGRAVHAFALKACFSKE 301
            N +  + +  F+++L  G   D  T+ +VL  C+          G  VH +A+K     +
Sbjct: 973  NNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIIND 1032

Query: 302  ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
               +  L+D+YSK G +D A  +     +  + SW +++ GY +      A+  F  M  
Sbjct: 1033 SFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092

Query: 362  EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
             GI  D   + + + A  C   L+ GK +  Y  +    + L+VS+ ++DMY KCG M +
Sbjct: 1093 MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPN 1152

Query: 422  AESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACAS 470
            A  +F ++   D V+W TMI           AL ++  M +   +PD  T A ++ A + 
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212

Query: 471  LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
            L ALE+G++IH  +++   S D  V  ++VDMY KCG +  A  +F  +  + ++ W  M
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272

Query: 531  IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
            + G   HG   +A+  F  M+  GI+PD+V+FI VL ACSHSGL  E +++F+ M     
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332

Query: 591  IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
            I P++EHY+C+VD L R G + EA   I  MP    A+++ +LL  CR   + + A++VA
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVA 1392

Query: 651  EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
            + +  L+P ++  YVLL+N+YA + +W++V   R  +  + +KK+PG SWI++K KV++F
Sbjct: 1393 DKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLF 1452

Query: 711  VAGGSSHPHA----KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKL 766
            V    SHP A    +KIE L+KR+R E     Y P T + L++ +E EKE AL  HSEKL
Sbjct: 1453 VVDDRSHPQASLIYEKIEDLMKRIREE---GSYVPDTDFTLLDVEEEEKERALYYHSEKL 1509

Query: 767  AMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
            A+AFG+++ P   TIRV KNLRVCGDCH   K +SK  +REIVLRD+NRFHHF++G CSC
Sbjct: 1510 AIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSC 1569

Query: 827  RGFW 830
              +W
Sbjct: 1570 GDYW 1573



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 166/593 (27%), Positives = 302/593 (50%), Gaps = 37/593 (6%)

Query: 116  KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
            + VH    + G  +D  V G+ LV ++   G + + R +F+K+      +WN+++  Y +
Sbjct: 737  ETVHGYAVKIGFELDLFVSGA-LVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795

Query: 176  TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL-AVVGNSRR-----VKD-AHKLFDELS 228
                 E+L  F      G   D     CV+  + + V N+R+     VK  A K+F    
Sbjct: 796  NSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQ 855

Query: 229  DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
              ++ +WN  ++ ++  G     ++ FK +L      D  T+V +LS       L  G  
Sbjct: 856  GSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQ 915

Query: 289  VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
            +HA  +K+ F+  +  +N+L++MYSK G +  A + F    E  ++SW +MI+ YA+  +
Sbjct: 916  IHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNL 975

Query: 349  FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE---IGKDVHDYIKENDMQSSLYV 405
               AI  FR ++R+G++PD + + S+L AC+     E   +G  VH Y  +  + +  +V
Sbjct: 976  EMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFV 1035

Query: 406  SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT-MIG---------ALDLFVAMLQNFE 455
            S AL+D+Y+K G M +AE + +     D+ SWN  M G         AL+ F  M +   
Sbjct: 1036 STALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGI 1095

Query: 456  P-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            P D +T+A  + A   L  L++G++I  Y ++ G + D  V++ ++DMY+KCG +  A  
Sbjct: 1096 PIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALE 1155

Query: 515  LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
            LF  I   D ++WT MI+GY  +G    A++ ++ MR +G++PDE +F +++ A S    
Sbjct: 1156 LFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215

Query: 575  VDEGWRFF-NMMRYECNIEPKLEHY--ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
            +++G +   N+++    ++  L+H+    +VD+  + G++ +AYR    M V      W 
Sbjct: 1216 LEQGKQIHANVVK----LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-VVFWN 1270

Query: 632  SLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL-----ANVYAEAEKW 677
            ++L G   H  V  A  +   +    ++PD   +  +L     + +++EA K+
Sbjct: 1271 AMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKY 1323



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 203/438 (46%), Gaps = 50/438 (11%)

Query: 220  AHKLFDELSDRDVVSWNCMISGY--IANGVAE---KGLEVFKEMLNLGFNVDLATMVTVL 274
            A ++FD+ SDRD+V+WN +++ Y   A+   E   +G  +F  +   GF++   T+  +L
Sbjct: 665  ARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLL 724

Query: 275  SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
              C   G +     VH +A+K  F  ++  +  L+++Y K G +  A  +F+KM ER  V
Sbjct: 725  KLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAV 784

Query: 335  SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
             W  M+  Y      D A+R F    R G  PD     S LH C   G   +  DV +  
Sbjct: 785  LWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDF----SNLH-CVIGG---VNSDVSNNR 836

Query: 395  KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN----------TMIGAL 444
            K +  Q   Y     M M+            F+Q    +I +WN           ++ A+
Sbjct: 837  KRHAEQVKAYA----MKMFP-----------FDQG--SNIFAWNKKLTEFLHAGQIVAAI 879

Query: 445  DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            D F  +L++    D VT+  IL A      L+ G +IH  +++   +    V+N++++MY
Sbjct: 880  DCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMY 939

Query: 504  VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
             K GV+  A   F   P  DLISW  MI+ Y  +    +AI TF D+ + G++PD+ +  
Sbjct: 940  SKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLA 999

Query: 564  SVLYACSHSGLVDEGWRF-----FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            SVL ACS     DEG  F      ++   +C I         ++DL S+ G + EA  F+
Sbjct: 1000 SVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFL 1055

Query: 619  EMMPVAPDATIWGSLLCG 636
                   D   W +++ G
Sbjct: 1056 LHGKYDFDLASWNAIMFG 1073



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 220/514 (42%), Gaps = 80/514 (15%)

Query: 107  ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIW 166
            ADLK    GK+ H+ I  SG  + D  L + L+ M+  CG L   R+VF+K  +  +  W
Sbjct: 625  ADLKL---GKRAHARIVTSGD-LPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTW 680

Query: 167  NLLMHEYSKTG-----NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
            N ++  Y++       N  E   LF  ++  G +    T + +LK   + G  +  +  H
Sbjct: 681  NSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVH 740

Query: 222  K--------------------------------LFDELSDRDVVSWNCMISGYIANGVAE 249
                                             LFD++ +RD V WN M+  Y+ N   +
Sbjct: 741  GYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQD 800

Query: 250  KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
            + L  F      GF  D + +  V+ G  +   +   R  HA  +KA             
Sbjct: 801  EALRFFSAFHRSGFXPDFSNLHCVIGGVNS--DVSNNRKRHAEQVKAY------------ 846

Query: 310  DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
                       A+++F      ++ +W   +  +   G    AI  F+ ++R  I  D  
Sbjct: 847  -----------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSV 895

Query: 370  AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
             +  IL A      L++G+ +H  + ++     + VSN+LM+MY+K G +  AE  F   
Sbjct: 896  TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 430  PVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALER-- 476
            P  D++SWNTMI           A+  F  +L++  +PD  T+A +L AC++    E   
Sbjct: 956  PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015

Query: 477  -GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
             G ++H Y ++ GI  D  V+ A++D+Y K G +  A  L       DL SW  ++ GY 
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYI 1075

Query: 536  MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
                   A+  F+ M + GI  DE++  + + A 
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS 1109



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 151/345 (43%), Gaps = 46/345 (13%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G+  HA  + +    +    N L+ MYSKCG L  A +VF+K  +R +V+W S++A 
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 343 YAR------EGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           YA+      E V +G  RLF G++RE G       +  +L  C   G +++ + VH Y  
Sbjct: 687 YAQFADSSYENVLEG-FRLF-GLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           +   +  L+VS AL+++Y K G +  A  +F++MP +D V WN M+           AL 
Sbjct: 745 KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR 804

Query: 446 LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
            F A  ++ F PD   + C++    S  +  R R                          
Sbjct: 805 FFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAE----------------------- 841

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
              V   A  +F      ++ +W   +  +   G    AI  F  + ++ I  D V+ + 
Sbjct: 842 --QVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVI 899

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           +L A   +  +D G +   ++  + +  P +     ++++ S+ G
Sbjct: 900 ILSAAVGADDLDLGEQIHALV-IKSSFAPVVPVSNSLMNMYSKAG 943



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 88/160 (55%), Gaps = 6/160 (3%)

Query: 70   IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
            I  + E G+ + A+ V +    S +  D  T+ ++++  + L +LE GK++H+ + +   
Sbjct: 1172 ISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY 1231

Query: 128  VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
             +D  V G+ LV M+  CG +++  RVF K+D  KV  WN ++   ++ G+  E+L LF+
Sbjct: 1232 SLDHFV-GTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFR 1290

Query: 188  KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL 227
             MQS GI  D  TF   +  L+   +S    +A+K FD +
Sbjct: 1291 TMQSNGIQPDKVTF---IGVLSACSHSGLFSEAYKYFDAM 1327



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           ++A L+ G+  H  I+  G   DR + N ++ MY KCG L  AR +FD    +DL++W  
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682

Query: 530 MIAGYGMHGFGC-----DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           ++A Y            +    F  +R+ G     ++   +L  C  SG V        +
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSE---TV 739

Query: 585 MRYECNIEPKLEHY--ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
             Y   I  +L+ +    +V++  + G + +A    + MP   DA +W  +L
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVML 790


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 258/756 (34%), Positives = 397/756 (52%), Gaps = 111/756 (14%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL- 227
           L+H Y+ + +      LF+      +AA S     ++   AV G   R++D+   FD + 
Sbjct: 66  LLHLYTLSPDLATPAVLFRADPG-PVAATS-----LVSAYAVAG---RLRDSAAFFDSVP 116

Query: 228 -SDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSGCANCGALM 284
            + RD V  N MIS +    +A   + VF+ +L  +     D  +  ++LS       L 
Sbjct: 117 VARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLA 176

Query: 285 FGR------AVHAFALKACFSKEISFNNTLLDMYSKC----------------------- 315
                    AVH     A     +S +N L+ +Y KC                       
Sbjct: 177 VSHCTQLHCAVHKLGAGAV----LSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELT 232

Query: 316 -----------GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
                      GD+  A   FE++     V W +MI+GY + G+   A  LFR MV + I
Sbjct: 233 WTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRI 292

Query: 365 EPDVYAITSILHACACDGLLEIGKDVH--------DYIKENDMQSSLYVSNALMDMYAKC 416
            PD +  TS+L ACA  G    GK VH        D++ E    ++L V+NAL+ +Y+K 
Sbjct: 293 PPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE----AALPVNNALVTLYSKS 348

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIG---------------------------------- 442
           G +A A  +F+ M +KD+VSWNT++                                   
Sbjct: 349 GKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYV 408

Query: 443 -------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  AL LF  M  ++ +P   T A  + AC  L AL+ G+++H ++++ G  A  +
Sbjct: 409 HGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNS 468

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
             NA++ MY +CG +  AR +F ++P  D +SW  MI+  G HG G +A+  F+ M   G
Sbjct: 469 AGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQG 528

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           I PD +SF+++L AC+H+GLVD+G+++F  M  +  I P  +HYA ++DLL R G + EA
Sbjct: 529 IYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEA 588

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
              I+ MP  P   IW ++L GCRI+ +++L    A+ +F++ P++ G Y+LL+N Y+ A
Sbjct: 589 RDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAA 648

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +W +  ++R+ +  RG+KK PGCSWIE+  KV++F+ G + HP A ++   L+ +  +M
Sbjct: 649 GRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKM 708

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           ++ GY P T++AL +    EKE  L  HSE+LA++FG+L LPAG T+ V KNL++CGDCH
Sbjct: 709 RKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCH 768

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               FMS+   REIV+RD  RFHHFKDG CSC  +W
Sbjct: 769 TAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 162/383 (42%), Gaps = 75/383 (19%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D +  + +V   V  GD+   R  F +ID     +WN ++  Y ++G   E+  LF++M 
Sbjct: 229 DELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMV 288

Query: 191 SLGIAADSYTFSCVLKCLAVVG------------------------------------NS 214
           S  I  D +TF+ +L   A  G                                     S
Sbjct: 289 SKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKS 348

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV- 273
            ++  A K+FD ++ +DVVSWN ++SGYI +G  +    +FKEM    +  +L+ MV V 
Sbjct: 349 GKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEM---PYKSELSWMVMVS 405

Query: 274 ---------------------------------LSGCANCGALMFGRAVHAFALKACFSK 300
                                            ++ C   GAL  G+ +HA  ++  F  
Sbjct: 406 GYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEA 465

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
             S  N LL MY++CG +  A  VF  M     VSW +MI+   + G    A+ LF  MV
Sbjct: 466 SNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMV 525

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA-LMDMYAKCGSM 419
            +GI PD  +  +IL AC   GL++ G    + ++ +   S      A L+D+  + G +
Sbjct: 526 AQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRI 585

Query: 420 ADAESVFNQMPVKDIVS-WNTMI 441
            +A  +   MP +   + W  ++
Sbjct: 586 GEARDLIKTMPFEPTPAIWEAIL 608



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 24/308 (7%)

Query: 37  IVSSKSHSSCTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVL--YSSEKSK 93
           I+S    S C  N  +A I K +  K++ ++   +  +   G  E A+++     SE  K
Sbjct: 372 ILSGYIESGCLDN--AARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVK 429

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
               TY   +  C +L +L+ GK++H+ + + G    +   G+ L+ M+  CG +K+ R 
Sbjct: 430 PCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSA-GNALLTMYARCGAVKDARL 488

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VF  + N     WN ++    + G+ +E+L LF +M + GI  D  +F   L  L    +
Sbjct: 489 VFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISF---LTILTACNH 545

Query: 214 SRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
           +  V D  + F+ +     +S     +  +I      G   +  ++ K M    F    A
Sbjct: 546 AGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTM---PFEPTPA 602

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT---LLDMYSKCGDLDGAIRVF 325
               +LSGC   G +  G    A+A    F      + T   L + YS  G    A RV 
Sbjct: 603 IWEAILSGCRINGDMELG----AYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVR 658

Query: 326 EKMGERSV 333
           + M +R V
Sbjct: 659 KLMRDRGV 666


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/570 (39%), Positives = 337/570 (59%), Gaps = 12/570 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++L  C +  AL  G+ +HA   +   +  +     L++ YS C  L  A  +F+K+ + 
Sbjct: 63  SLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKG 122

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           ++  W  +I  YA  G  + AI L+  M+  G++PD + +  +L AC+    +  G+ +H
Sbjct: 123 NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIH 182

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------- 443
           + +  +  +  ++V  AL+DMYAKCG + DA  VF+++  +D V WN+M+ A        
Sbjct: 183 ERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPD 242

Query: 444 --LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
             L L   M  +   P   T+  ++ + A +A L  GREIHG+  RHG   +  V  A++
Sbjct: 243 ESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALI 302

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY KCG + +A  LF+ +  K ++SW  +I GY MHG   +A+  F  M +   +PD +
Sbjct: 303 DMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHI 361

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+  L ACS   L+DEG   +N+M  +C I P +EHY CMVDLL   G L EAY  I  
Sbjct: 362 TFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQ 421

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           M V PD+ +WG+LL  C+ H  V+LAE   E + ELEPD++G YV+LAN+YA++ KWE V
Sbjct: 422 MDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGV 481

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            +LR+ +  +G+KKN  CSWIE+K KV  F++G  SHP++  I + LKRL   M+  GY 
Sbjct: 482 ARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYV 541

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T     + +E EK   +C HSE+LA+AFG+++   G  + +TKNLR+C DCH   KF+
Sbjct: 542 PDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFI 601

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK   REI +RD NR+HHF+ G CSC  +W
Sbjct: 602 SKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 191/379 (50%), Gaps = 36/379 (9%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y S+L+ C   K+LE GK++H+ +C+ GI  +   L +KLV  +  C  L+    +F+KI
Sbjct: 61  YASLLESCISAKALEPGKQLHARLCQLGIAYNLD-LATKLVNFYSVCNSLRNAHHLFDKI 119

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSR 215
             G +F+WN+L+  Y+  G  + ++ L+ +M   G+  D++T   VLK    L+ +G  R
Sbjct: 120 PKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGR 179

Query: 216 RVK-----------------------------DAHKLFDELSDRDVVSWNCMISGYIANG 246
            +                              DA  +FD++ DRD V WN M++ Y  NG
Sbjct: 180 VIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNG 239

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
             ++ L +  EM   G     AT+VTV+S  A+   L  GR +H F  +  F        
Sbjct: 240 HPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKT 299

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L+DMY+KCG +  A  +FE++ E+ VVSW ++I GYA  G+   A+ LF  M++E  +P
Sbjct: 300 ALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QP 358

Query: 367 DVYAITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           D       L AC+   LL+ G+ +++  +++  +  ++     ++D+   CG + +A  +
Sbjct: 359 DHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDL 418

Query: 426 FNQMPV-KDIVSWNTMIGA 443
             QM V  D   W  ++ +
Sbjct: 419 IRQMDVMPDSGVWGALLNS 437



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 183/369 (49%), Gaps = 21/369 (5%)

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
           L  ++  LGIA   Y      K +        +++AH LFD++   ++  WN +I  Y  
Sbjct: 80  LHARLCQLGIA---YNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAW 136

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           NG  E  + ++ +ML  G   D  T+  VL  C+    +  GR +H   +++ + +++  
Sbjct: 137 NGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFV 196

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
              L+DMY+KCG +  A  VF+K+ +R  V W SM+A YA+ G  D ++ L   M  +G+
Sbjct: 197 GAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGV 256

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
            P    + +++ + A    L  G+++H +   +  Q +  V  AL+DMYAKCGS+  A  
Sbjct: 257 RPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACV 316

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAAL 474
           +F ++  K +VSWN +I           ALDLF  M++  +PD +T    L AC+    L
Sbjct: 317 LFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEAQPDHITFVGALAACSRGRLL 376

Query: 475 ERGREIHGYILRH-GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS----WTI 529
           + GR ++  ++R   I+        +VD+   CG L  A   +D+I   D++     W  
Sbjct: 377 DEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEA---YDLIRQMDVMPDSGVWGA 433

Query: 530 MIAGYGMHG 538
           ++     HG
Sbjct: 434 LLNSCKTHG 442



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 156/317 (49%), Gaps = 24/317 (7%)

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           Y   S+L +C     LE GK +H  + +  +  +L ++  L++ Y+ C S+ +A  +F++
Sbjct: 59  YYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDK 118

Query: 429 MPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG 477
           +P  ++  WN +I           A+ L+  ML+   +PD  T+  +L AC++L+ +  G
Sbjct: 119 IPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEG 178

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           R IH  ++R G   D  V  A+VDMY KCG +V AR +FD I  +D + W  M+A Y  +
Sbjct: 179 RVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQN 238

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVL-----YACSHSGLVDEGWRFFNMMRYECNIE 592
           G   ++++   +M   G+ P E + ++V+      AC   G    G+ + +  +Y   ++
Sbjct: 239 GHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVK 298

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
             L      +D+ ++ G++  A    E +        W +++ G  +H     A  + E 
Sbjct: 299 TAL------IDMYAKCGSVKVACVLFERLR-EKRVVSWNAIITGYAMHGLAVEALDLFER 351

Query: 653 VF-ELEPDNTGYYVLLA 668
           +  E +PD+  +   LA
Sbjct: 352 MMKEAQPDHITFVGALA 368



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 74/346 (21%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T   +L+ C+ L ++ +G+ +H  +  SG    D  +G+ LV M+  CG + + R
Sbjct: 156 KPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWE-RDVFVGAALVDMYAKCGCVVDAR 214

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LA 209
            VF+KI +    +WN ++  Y++ G+  ESL L  +M + G+     T   V+     +A
Sbjct: 215 HVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIA 274

Query: 210 VVGNSRR-----------------------------VKDAHKLFDELSDRDVVSWNCMIS 240
            + + R                              VK A  LF+ L ++ VVSWN +I+
Sbjct: 275 CLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIIT 334

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC-FS 299
           GY  +G+A + L++F+ M+      D  T V  L+ C+    L  GRA++   ++ C  +
Sbjct: 335 GYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRIN 393

Query: 300 KEISFNNTLLDMYSKCGDLDGA---IRVFEKMGERSVVSWTSMIAG-------------- 342
             +     ++D+   CG LD A   IR  + M +  V  W +++                
Sbjct: 394 PTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGV--WGALLNSCKTHGNVELAEVAL 451

Query: 343 --------------------YAREGVFDGAIRLFRGMVREGIEPDV 368
                               YA+ G ++G  RL + M+ +GI+ ++
Sbjct: 452 EKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNI 497



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/333 (20%), Positives = 142/333 (42%), Gaps = 40/333 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ +  + + G+ ++++ +    +++  +    T  +++   AD+  L  G+++H    
Sbjct: 228 WNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGW 287

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             G   +D V  + L+ M+  CG +K    +F ++   +V  WN ++  Y+  G   E+L
Sbjct: 288 RHGFQYNDKV-KTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEAL 346

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD------VVSWNC 237
            LF++M       D  TF   +  LA     R + +   L++ L  RD      V  + C
Sbjct: 347 DLFERMMKEA-QPDHITF---VGALAACSRGRLLDEGRALYN-LMVRDCRINPTVEHYTC 401

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+      G  ++  ++ ++M       D      +L+ C   G +         AL+  
Sbjct: 402 MVDLLGHCGQLDEAYDLIRQM---DVMPDSGVWGALLNSCKTHGNVELAEV----ALEKL 454

Query: 298 FSKEI--SFNNTLL-DMYSKCGDLDGAIRVFEKMGERSV-----VSWT-------SMIAG 342
              E   S N  +L +MY++ G  +G  R+ + M ++ +      SW        + ++G
Sbjct: 455 IELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSG 514

Query: 343 ---YAREGVFDGAIRLFRGMVRE-GIEPDVYAI 371
              +   G     ++   G++RE G  PD  ++
Sbjct: 515 DVSHPNSGAIYAELKRLEGLMREAGYVPDTGSV 547


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/724 (35%), Positives = 386/724 (53%), Gaps = 54/724 (7%)

Query: 158  IDNG-KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--------- 207
             D G  +F WN  + E+   G    ++  FK +    I  DS T   +L           
Sbjct: 853  FDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDL 912

Query: 208  ---------------LAVVGNSRR--------VKDAHKLFDELSDRDVVSWNCMISGYIA 244
                           +  V NS          V  A K F    + D++SWN MIS Y  
Sbjct: 913  GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ 972

Query: 245  NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA---LMFGRAVHAFALKACFSKE 301
            N +  + +  F+++L  G   D  T+ +VL  C+          G  VH +A+K     +
Sbjct: 973  NNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIIND 1032

Query: 302  ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
               +  L+D+YSK G +D A  +     +  + SW +++ GY +      A+  F  M  
Sbjct: 1033 SFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092

Query: 362  EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
             GI  D   + + + A  C   L+ GK +  Y  +    + L+VS+ ++DMY KCG M +
Sbjct: 1093 MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPN 1152

Query: 422  AESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACAS 470
            A  +F ++   D V+W TMI           AL ++  M +   +PD  T A ++ A + 
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212

Query: 471  LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
            L ALE+G++IH  +++   S D  V  ++VDMY KCG +  A  +F  +  + ++ W  M
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272

Query: 531  IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
            + G   HG   +A+  F  M+  GI+PD+V+FI VL ACSHSGL  E +++F+ M     
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332

Query: 591  IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
            I P++EHY+C+VD L R G + EA   I  MP    A+++ +LL  CR   + + A++VA
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVA 1392

Query: 651  EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
            + +  L+P ++  YVLL+N+YA + +W++V   R  +  + +KK+PG SWI++K KV++F
Sbjct: 1393 DKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLF 1452

Query: 711  VAGGSSHPHA----KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKL 766
            V    SHP A    +KIE L+KR+R E     Y P T + L++ +E EKE AL  HSEKL
Sbjct: 1453 VVDDRSHPQASLIYEKIEDLMKRIREE---GSYVPDTDFTLLDVEEEEKERALYYHSEKL 1509

Query: 767  AMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
            A+AFG+++ P   TIRV KNLRVCGDCH   K +SK  +REIVLRD+NRFHHF++G CSC
Sbjct: 1510 AIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSC 1569

Query: 827  RGFW 830
              +W
Sbjct: 1570 GDYW 1573



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 166/593 (27%), Positives = 302/593 (50%), Gaps = 37/593 (6%)

Query: 116  KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
            + VH    + G  +D  V G+ LV ++   G + + R +F+K+      +WN+++  Y +
Sbjct: 737  ETVHGYAVKIGFELDLFVSGA-LVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795

Query: 176  TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL-AVVGNSRR-----VKD-AHKLFDELS 228
                 E+L  F      G   D     CV+  + + V N+R+     VK  A K+F    
Sbjct: 796  NSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQ 855

Query: 229  DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
              ++ +WN  ++ ++  G     ++ FK +L      D  T+V +LS       L  G  
Sbjct: 856  GSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQ 915

Query: 289  VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
            +HA  +K+ F+  +  +N+L++MYSK G +  A + F    E  ++SW +MI+ YA+  +
Sbjct: 916  IHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNL 975

Query: 349  FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE---IGKDVHDYIKENDMQSSLYV 405
               AI  FR ++R+G++PD + + S+L AC+     E   +G  VH Y  +  + +  +V
Sbjct: 976  EMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFV 1035

Query: 406  SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT-MIG---------ALDLFVAMLQNFE 455
            S AL+D+Y+K G M +AE + +     D+ SWN  M G         AL+ F  M +   
Sbjct: 1036 STALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGI 1095

Query: 456  P-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            P D +T+A  + A   L  L++G++I  Y ++ G + D  V++ ++DMY+KCG +  A  
Sbjct: 1096 PIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALE 1155

Query: 515  LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
            LF  I   D ++WT MI+GY  +G    A++ ++ MR +G++PDE +F +++ A S    
Sbjct: 1156 LFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215

Query: 575  VDEGWRFF-NMMRYECNIEPKLEHY--ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
            +++G +   N+++    ++  L+H+    +VD+  + G++ +AYR    M V      W 
Sbjct: 1216 LEQGKQIHANVVK----LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-VVFWN 1270

Query: 632  SLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL-----ANVYAEAEKW 677
            ++L G   H  V  A  +   +    ++PD   +  +L     + +++EA K+
Sbjct: 1271 AMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKY 1323



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 203/438 (46%), Gaps = 50/438 (11%)

Query: 220  AHKLFDELSDRDVVSWNCMISGY--IANGVAE---KGLEVFKEMLNLGFNVDLATMVTVL 274
            A ++FD+ SDRD+V+WN +++ Y   A+   E   +G  +F  +   GF++   T+  +L
Sbjct: 665  ARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLL 724

Query: 275  SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
              C   G +     VH +A+K  F  ++  +  L+++Y K G +  A  +F+KM ER  V
Sbjct: 725  KLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAV 784

Query: 335  SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
             W  M+  Y      D A+R F    R G  PD     S LH C   G   +  DV +  
Sbjct: 785  LWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDF----SNLH-CVIGG---VNSDVSNNR 836

Query: 395  KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN----------TMIGAL 444
            K +  Q   Y     M M+            F+Q    +I +WN           ++ A+
Sbjct: 837  KRHAEQVKAYA----MKMFP-----------FDQG--SNIFAWNKKLTEFLHAGQIVAAI 879

Query: 445  DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            D F  +L++    D VT+  IL A      L+ G +IH  +++   +    V+N++++MY
Sbjct: 880  DCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMY 939

Query: 504  VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
             K GV+  A   F   P  DLISW  MI+ Y  +    +AI TF D+ + G++PD+ +  
Sbjct: 940  SKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLA 999

Query: 564  SVLYACSHSGLVDEGWRF-----FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            SVL ACS     DEG  F      ++   +C I         ++DL S+ G + EA  F+
Sbjct: 1000 SVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFL 1055

Query: 619  EMMPVAPDATIWGSLLCG 636
                   D   W +++ G
Sbjct: 1056 LHGKYDFDLASWNAIMFG 1073



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 220/514 (42%), Gaps = 80/514 (15%)

Query: 107  ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIW 166
            ADLK    GK+ H+ I  SG  + D  L + L+ M+  CG L   R+VF+K  +  +  W
Sbjct: 625  ADLKL---GKRAHARIVTSGD-LPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTW 680

Query: 167  NLLMHEYSKTG-----NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
            N ++  Y++       N  E   LF  ++  G +    T + +LK   + G  +  +  H
Sbjct: 681  NSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVH 740

Query: 222  K--------------------------------LFDELSDRDVVSWNCMISGYIANGVAE 249
                                             LFD++ +RD V WN M+  Y+ N   +
Sbjct: 741  GYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQD 800

Query: 250  KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
            + L  F      GF  D + +  V+ G  +   +   R  HA  +KA             
Sbjct: 801  EALRFFSAFHRSGFFPDFSNLHCVIGGVNS--DVSNNRKRHAEQVKAY------------ 846

Query: 310  DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
                       A+++F      ++ +W   +  +   G    AI  F+ ++R  I  D  
Sbjct: 847  -----------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSV 895

Query: 370  AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
             +  IL A      L++G+ +H  + ++     + VSN+LM+MY+K G +  AE  F   
Sbjct: 896  TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 430  PVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALER-- 476
            P  D++SWNTMI           A+  F  +L++  +PD  T+A +L AC++    E   
Sbjct: 956  PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015

Query: 477  -GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
             G ++H Y ++ GI  D  V+ A++D+Y K G +  A  L       DL SW  ++ GY 
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYI 1075

Query: 536  MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
                   A+  F+ M + GI  DE++  + + A 
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS 1109



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 151/345 (43%), Gaps = 46/345 (13%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G+  HA  + +    +    N L+ MYSKCG L  A +VF+K  +R +V+W S++A 
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 343 YAR------EGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           YA+      E V +G  RLF G++RE G       +  +L  C   G +++ + VH Y  
Sbjct: 687 YAQFADSSYENVLEG-FRLF-GLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           +   +  L+VS AL+++Y K G +  A  +F++MP +D V WN M+           AL 
Sbjct: 745 KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR 804

Query: 446 LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
            F A  ++ F PD   + C++    S  +  R R                          
Sbjct: 805 FFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAE----------------------- 841

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
              V   A  +F      ++ +W   +  +   G    AI  F  + ++ I  D V+ + 
Sbjct: 842 --QVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVI 899

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           +L A   +  +D G +   ++  + +  P +     ++++ S+ G
Sbjct: 900 ILSAAVGADDLDLGEQIHALV-IKSSFAPVVPVSNSLMNMYSKAG 943



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 88/160 (55%), Gaps = 6/160 (3%)

Query: 70   IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
            I  + E G+ + A+ V +    S +  D  T+ ++++  + L +LE GK++H+ + +   
Sbjct: 1172 ISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY 1231

Query: 128  VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
             +D  V G+ LV M+  CG +++  RVF K+D  KV  WN ++   ++ G+  E+L LF+
Sbjct: 1232 SLDHFV-GTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFR 1290

Query: 188  KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL 227
             MQS GI  D  TF   +  L+   +S    +A+K FD +
Sbjct: 1291 TMQSNGIQPDKVTF---IGVLSACSHSGLFSEAYKYFDAM 1327



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           ++A L+ G+  H  I+  G   DR + N ++ MY KCG L  AR +FD    +DL++W  
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682

Query: 530 MIAGYGMHGFGC-----DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           ++A Y            +    F  +R+ G     ++   +L  C  SG V        +
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSE---TV 739

Query: 585 MRYECNIEPKLEHY--ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
             Y   I  +L+ +    +V++  + G + +A    + MP   DA +W  +L
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVML 790


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/640 (37%), Positives = 378/640 (59%), Gaps = 17/640 (2%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           + + G   R+  A  +FD +  R+VVSW  ++ G+I NG   + L +F +M   G   + 
Sbjct: 14  IVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPND 73

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T  T L  C     L  GR +H   +K  F       N+++DMYSKCG ++ A  +FE 
Sbjct: 74  FTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEV 133

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M  R+++SW +MIAGY   G  + A+ LF+ M   G   D +  TS L AC+  G ++ G
Sbjct: 134 MPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEG 193

Query: 388 KDVHDYIKENDMQSSL--YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---- 441
             +H ++       S+   V+ AL+D+Y KCG +  A  VF+ +  K ++SW  +I    
Sbjct: 194 NQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYA 253

Query: 442 ------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  +++LF  + ++  + DG  ++ ++   A  A +++G+++H + ++     D +
Sbjct: 254 QEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDIS 313

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V N+I+DMY+KCG++  A  LF  +PA+++ISWT+MI GYG HG G +AI  F++M+   
Sbjct: 314 VCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDS 373

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
            EPD+V++++VL  CSHSGLV++G  +F+ +     I+ ++EHYACMVDLL R G L EA
Sbjct: 374 TEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEA 433

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
              ++ MP+  +  IW +LL  CR+H +++L ++V   +  L+ +N   YV+++N+YA+A
Sbjct: 434 KNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIYADA 493

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
             W+E +++RE +  + LKK  G SW+EI  +V+ F  G  +HP  +KI  +LK +   M
Sbjct: 494 GYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKEMERRM 553

Query: 735 KRE-GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL--NLPAG-QTIRVTKNLRVC 790
           K E GY    +YAL + +E  K   L  HSEKLA+   ++   L  G + IRV KNLRVC
Sbjct: 554 KEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRVFKNLRVC 613

Query: 791 GDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           GDCHE  K +SK  R   V+RD+NRFH F+DG CSCR +W
Sbjct: 614 GDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 232/455 (50%), Gaps = 47/455 (10%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D +L + L+ M+  CG L     VF+++    V  W  LM  + + GN  ESL LF KM 
Sbjct: 6   DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65

Query: 191 SLGIAADSYTFSCVLKC------------------------LAVVGNS--------RRVK 218
             G+  + +TFS  LK                         + VVGNS         R+ 
Sbjct: 66  LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRIN 125

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           +A  +F+ +  R+++SWN MI+GY   G  EK L +F++M  +G  +D  T  + L  C+
Sbjct: 126 EAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACS 185

Query: 279 NCGALMFGRAVHAFALKACF--SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           + GA+  G  +HAF +   F  S   +    L+D+Y KCG L  A RVF  + E+ V+SW
Sbjct: 186 DLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISW 245

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T++I GYA+EG    ++ LFR +    I+ D + ++S++   A   L++ GK +H +  +
Sbjct: 246 TALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIK 305

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
                 + V N+++DMY KCG + +AE +F++MP ++++SW  MI           A+ L
Sbjct: 306 VPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRL 365

Query: 447 FVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYV 504
           F  M L + EPD VT   +L  C+    +E+G+E    +   HGI A       +VD+  
Sbjct: 366 FDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLG 425

Query: 505 KCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
           + G L  A++L D +P +  +  W  +++   +HG
Sbjct: 426 RAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 130/427 (30%), Positives = 217/427 (50%), Gaps = 32/427 (7%)

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F  ++  +N L+ MY KCG L  A  VF++M +R+VVSWT+++ G+ + G    ++ LF 
Sbjct: 3   FGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFS 62

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M   G++P+ +  ++ L AC     L+IG+ +HD   +        V N+++DMY+KCG
Sbjct: 63  KMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCG 122

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILP 466
            + +A  +F  MPV++++SWN MI           AL LF  M +     D  T    L 
Sbjct: 123 RINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLK 182

Query: 467 ACASLAALERGREIHGYILRHGI--SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           AC+ L A++ G +IH +++  G   S +  VA A++D+YVKCG L +AR +F  I  K +
Sbjct: 183 ACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHV 242

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           ISWT +I GY   G   +++  F  +R++ I+ D     S++   +   LV +G +   M
Sbjct: 243 ISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQ---M 299

Query: 585 MRYECNIEPKLEHYAC--MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
             +   +   ++   C  ++D+  + G ++EA R    MP A +   W  ++ G   H  
Sbjct: 300 HAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMP-ARNVISWTVMITGYGKHGL 358

Query: 643 VKLAEKVAE--HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSW 700
            K A ++ +   +   EPD+  Y  +L            V+K +E  SR        CS+
Sbjct: 359 GKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSG----LVEKGQEYFSRL-------CSY 407

Query: 701 IEIKGKV 707
             IK +V
Sbjct: 408 HGIKARV 414



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 206/425 (48%), Gaps = 61/425 (14%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ + L+ C  L  L+ G+++H I  ++G  + + V+G+ ++ M+  CG + E   +F  
Sbjct: 75  TFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVN-VVGNSIIDMYSKCGRINEAACMFEV 133

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +    +  WN ++  Y+  G  +++L LF+KMQ +G   D +TF+  LK  + +G  +  
Sbjct: 134 MPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEG 193

Query: 218 KDAH----------------------------------KLFDELSDRDVVSWNCMISGYI 243
              H                                  ++F  + ++ V+SW  +I GY 
Sbjct: 194 NQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYA 253

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
             G   + +E+F+++      VD   + +++   A+   +  G+ +HAFA+K     +IS
Sbjct: 254 QEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDIS 313

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N++LDMY KCG ++ A R+F +M  R+V+SWT MI GY + G+   AIRLF  M  + 
Sbjct: 314 VCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDS 373

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADA 422
            EPD     ++L  C+  GL+E G++    +   + +++ +     ++D+  + G + +A
Sbjct: 374 TEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEA 433

Query: 423 ESVFNQMPVK-DIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIH 481
           +++ + MP++ ++  W T+                        L AC     LE G+E+ 
Sbjct: 434 KNLVDSMPLEANVGIWQTL------------------------LSACRVHGDLELGKEVG 469

Query: 482 GYILR 486
           G +LR
Sbjct: 470 GILLR 474



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 177/398 (44%), Gaps = 73/398 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSK--IDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  +   G  EKA+ +    ++    +D  T+ S L+ C+DL ++++G ++H+ +
Sbjct: 141 SWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFL 200

Query: 123 CESGIV--IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              G +  ++  V G+ L+ ++V CG L   RRVF+ I+   V  W  L+  Y++ GN  
Sbjct: 201 ITGGFLYSVNTAVAGA-LIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLA 259

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRR--------------------- 216
           ES+ LF++++   I  D +  S ++      A+V   ++                     
Sbjct: 260 ESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSIL 319

Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   + +A +LF E+  R+V+SW  MI+GY  +G+ ++ + +F EM       D  
Sbjct: 320 DMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDV 379

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T + VL GC++ G +  G+          FS+  S++                       
Sbjct: 380 TYLAVLLGCSHSGLVEKGQEY--------FSRLCSYHGI--------------------- 410

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            +  V  +  M+    R G    A  L   M    +E +V    ++L AC   G LE+GK
Sbjct: 411 -KARVEHYACMVDLLGRAGRLKEAKNLVDSM---PLEANVGIWQTLLSACRVHGDLELGK 466

Query: 389 DVHDYIKENDMQSSL-YVSNALMDMYAKCGSMADAESV 425
           +V   +   D ++ + YV   + ++YA  G   + E +
Sbjct: 467 EVGGILLRLDSENPVNYV--MMSNIYADAGYWKECERI 502



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 82/157 (52%), Gaps = 18/157 (11%)

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           G   D  ++N ++ MY KCG L +A  +FD +  ++++SWT ++ G+  +G   +++  F
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF--------FNMMRYECNIEPKLEHYA 599
           + M  +G++P++ +F + L AC     +D G +         F+M+    N         
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGN--------- 112

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            ++D+ S+ G ++EA    E+MPV  +   W +++ G
Sbjct: 113 SIIDMYSKCGRINEAACMFEVMPV-RNLISWNAMIAG 148


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/692 (34%), Positives = 402/692 (58%), Gaps = 44/692 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  +++ C  L ++  GK +  +I E G  +D  V  S L+ ++   G +++ RR 
Sbjct: 9   DKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFV-ASSLIKLYADNGCIEDARRF 67

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------- 207
           F+K+ +    +WN++++ Y + G    ++ LFK M S     DS TF+CVL         
Sbjct: 68  FDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMV 127

Query: 208 -----------------LAVVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGY 242
                            + +VGN+        R++ DA KLFD +   D+V WN MI GY
Sbjct: 128 EYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGY 187

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           + NG  +    +F EM++ G   D  T  + L   A   +L   + +H + ++     ++
Sbjct: 188 VQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDV 247

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
             N+ L+D+Y KC D   A ++F    +  +V +T+MI+GY   G+   A+ +FR ++++
Sbjct: 248 YLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQK 307

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
            + P+    +SIL ACA    +++G+++H YI +N+++    V +A+M+MYAKCG +  A
Sbjct: 308 KMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLA 367

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
             +F ++ +KD + WN++I           A+ LF  M ++  + D VT++  L ACA++
Sbjct: 368 HLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANI 427

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            AL  G+EIHG++++    +D    +A+++MY KCG L +AR +F+++  K+ ++W  +I
Sbjct: 428 PALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSII 487

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           A YG HG+  D++A F++M + GI+PD ++F+++L +C H+G V++G R+F  M  E  I
Sbjct: 488 AAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGI 547

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
             ++EHYACM DL  R G+L EA+  I  MP  P A++WG+LL  CR+H  V+LAE  + 
Sbjct: 548 PAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASR 607

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
           ++ +LEP N+GYY+LL +V A+A KW  V K++  +  RG++K PGCSWIE+     +F 
Sbjct: 608 YLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFF 667

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           A   SHP + +I SLLK L LE+++ GY P+ 
Sbjct: 668 AADGSHPESPQIYSLLKSLLLELRKVGYVPQA 699



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 199/388 (51%), Gaps = 13/388 (3%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           ML  G   D  T   V+  C     +  G+ +    L+  F  ++   ++L+ +Y+  G 
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           ++ A R F+KM ++  V W  MI GY + G  D AI+LF+ M+    +PD      +L  
Sbjct: 61  IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
              + ++E G+ +H  +  + +     V N L+ +Y+K   + DA  +F+ MP  D+V W
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180

Query: 438 NTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR 486
           N MIG          A  LF  M+    +PD +T    LP+ A  ++L++ +EIHGYI+R
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVR 240

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
           HG+  D  + +A++D+Y KC   V+A  +F++    D++ +T MI+GY ++G   DA+  
Sbjct: 241 HGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEI 300

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
           F  + Q  + P+ ++F S+L AC+    +  G R  +    +  +E K    + ++++ +
Sbjct: 301 FRWLLQKKMIPNALTFSSILPACAGLAAIKLG-RELHGYIIKNELEEKCPVGSAIMNMYA 359

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           + G L  A+     + +  DA  W S++
Sbjct: 360 KCGRLDLAHLIFGRISIK-DAICWNSII 386



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 199/415 (47%), Gaps = 39/415 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +N  IG + + G ++ A  +L++   S   K D+ T+ S L   A+  SL+  K++H  I
Sbjct: 180 WNRMIGGYVQNGFMDDA-SMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYI 238

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G+++D   L S L+ ++  C D     ++FN      + I+  ++  Y   G  K++
Sbjct: 239 VRHGVILDV-YLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDA 297

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSR------------------------ 215
           L +F+ +    +  ++ TFS +L     LA +   R                        
Sbjct: 298 LEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNM 357

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R+  AH +F  +S +D + WN +I+ +  +G  E+ + +F++M   G   D  T+
Sbjct: 358 YAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTV 417

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
              LS CAN  AL +G+ +H F +K  F  ++   + L++MY+KCG L+ A  VF  M E
Sbjct: 418 SAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQE 477

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KD 389
           ++ V+W S+IA Y   G    ++ LF  M+ EGI+PD     +IL +C   G +E G + 
Sbjct: 478 KNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRY 537

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
                +E  + + +     + D++ + G + +A  V   MP     S W T++GA
Sbjct: 538 FRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGA 592


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/737 (33%), Positives = 389/737 (52%), Gaps = 46/737 (6%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           LV      G + E       +     F+ N+++  ++  G    +L  ++ M   G   D
Sbjct: 47  LVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106

Query: 198 SYTFSCVLKCLAVVGNSRR--------------------------------VKDAHKLFD 225
            +TF  V+KC A +G                                    V+DA ++FD
Sbjct: 107 RFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFD 166

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN-LGFNVDLATMVTVLSGCANCGALM 284
            +  RD+V+WN M+ GY++NG+    L  F+EM + L    D   ++  L+ C    + M
Sbjct: 167 GMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSM 226

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            G+ +H + ++    ++I    +LLDMY KCG++  A  VF  M  R+VV+W  MI GYA
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
                D A   F  M  EG++ +V    ++L ACA       G+ VH Y+        + 
Sbjct: 287 LNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVV 346

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QN 453
           +  AL++MY K G +  +E +F ++  K +VSWN MI A          + LF+ +L Q 
Sbjct: 347 LETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQP 406

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
             PD  TM+ ++PA   L +L   R+IH YI+  G + +  + NA++ MY + G +V +R
Sbjct: 407 LYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASR 466

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
            +FD + +KD+ISW  MI GY +HG G  A+  F++M+  G++P+E +F+SVL ACS SG
Sbjct: 467 EIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSG 526

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
           LVDEGW  FN+M  E  + P++EHY CM DLL R G+L E  +FIE MP+ P + +WGSL
Sbjct: 527 LVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSL 586

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
           L   R  +++ +AE  AE +F+LE DNTG Y++L+++YA+A +WE+V+++R  +  +GL+
Sbjct: 587 LTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLR 646

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           +    S +E+      F  G  SH  ++ I  +   L  ++K         Y +  A   
Sbjct: 647 RTEPISLVELHSTACSFANGDMSHSQSRTIHEVSDILSRKIKETDDTRNQSYPVPVA--T 704

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
                   HS +LA+ FG+++   G  I V KN+R+C  CH   K +S+ + R IV+ DS
Sbjct: 705 RTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDS 764

Query: 814 NRFHHFKDGRCSCRGFW 830
             +H F DG C C  +W
Sbjct: 765 KIYHEFSDGSCCCGDYW 781



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 209/432 (48%), Gaps = 45/432 (10%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           + ++ D  T+  +++ CA L  L++G+  H ++ + G+  D     S LV  +   G ++
Sbjct: 101 DGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNS-LVAFYAKLGLVE 159

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSCVLKCL 208
           +  RVF+ +    +  WN+++  Y   G    +L  F++M  +L +  DS      L   
Sbjct: 160 DAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAAC 219

Query: 209 AVVGNSRRVKDAH--------------------------------KLFDELSDRDVVSWN 236
            +  +S + K+ H                                 +F  +  R VV+WN
Sbjct: 220 CLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWN 279

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
           CMI GY  N   ++  + F +M   G  V++ T + +L+ CA   + ++GR+VH + ++ 
Sbjct: 280 CMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRR 339

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            F   +     LL+MY K G ++ + ++F K+  +++VSW +MIA Y  + ++  AI LF
Sbjct: 340 QFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLF 399

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             ++ + + PD + +++++ A    G L   + +H YI       +  + NA++ MYA+ 
Sbjct: 400 LELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARS 459

Query: 417 GSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACIL 465
           G +  +  +F++M  KD++SWNTMI           AL++F  M  N  +P+  T   +L
Sbjct: 460 GDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVL 519

Query: 466 PACASLAALERG 477
            AC+    ++ G
Sbjct: 520 TACSVSGLVDEG 531



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 169/390 (43%), Gaps = 50/390 (12%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           +E  +++  T  ++L  CA  +S   G+ VH  +      +   VL + L+ M+   G +
Sbjct: 303 AEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQF-LPHVVLETALLEMYGKVGKV 361

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           +   ++F KI N  +  WN ++  Y     + E++ LF ++ +  +  D +T S V+   
Sbjct: 362 ESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAF 421

Query: 209 AVVGNSRRVKDAH--------------------------------KLFDELSDRDVVSWN 236
            ++G+ R  +  H                                ++FD++  +DV+SWN
Sbjct: 422 VLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWN 481

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MI GY  +G  +  LE+F EM   G   + +T V+VL+ C+  G +  G       L+ 
Sbjct: 482 TMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQE 541

Query: 297 C-FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFD---- 350
                +I     + D+  + GDL   ++  E M  + +   W S++     +   D    
Sbjct: 542 YGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEY 601

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A R+F+    E      Y + S ++A A  G  E  + V   +KE  ++ +  +S  L+
Sbjct: 602 AAERIFQ---LEHDNTGCYIVLSSMYADA--GRWEDVERVRLLMKEKGLRRTEPIS--LV 654

Query: 411 DMYAKCGSMADAESVFNQ----MPVKDIVS 436
           ++++   S A+ +   +Q      V DI+S
Sbjct: 655 ELHSTACSFANGDMSHSQSRTIHEVSDILS 684


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/712 (36%), Positives = 383/712 (53%), Gaps = 51/712 (7%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
            ++ N L+  Y+ +G    +  +F  M    +     T + +L  LA  G    V+D  +
Sbjct: 46  TYLLNTLLTAYASSGLLPHARRVFDAMPGRNLV----TGNSLLSALARAG---LVRDMER 98

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN--LGFNVDLATMVTVLSGCANC 280
           LF  L  RD VS+N +++G+   G   +    +  +L    G      TM  V+   +  
Sbjct: 99  LFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASAL 158

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG----------- 329
           G    GR VH   L+  F       + L+DMY+K G +  A RVF++M            
Sbjct: 159 GDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMI 218

Query: 330 --------------------ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
                               ER  ++WT+M+ G  + G+   A+ +FR M  EG+  D Y
Sbjct: 219 TGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQY 278

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
              SIL AC     LE GK +H YI     + +++V +AL+DMY+KC S+  AE+VF +M
Sbjct: 279 TFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRM 338

Query: 430 PVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGR 478
             K+I+SW  MI           A+ +F  M ++  +PD  T+  ++ +CA+LA+LE G 
Sbjct: 339 MWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGA 398

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           + H   L  G+     V+NA+V +Y KCG +  A  LFD +   D +SWT ++ GY   G
Sbjct: 399 QFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFG 458

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
              + I  F  M   G++PD V+FI VL ACS SGLVD+G  +F+ M+ + +I P  +HY
Sbjct: 459 KAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHY 518

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
            CM+DL SR+G L +A  FI+ MP  PDA  W +LL  CR+  ++++ +  AE++ +L+P
Sbjct: 519 TCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDP 578

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
            N   YVLL +++A   +W +V KLR  +  R +KK PGCSWI+ K KV+IF A   SHP
Sbjct: 579 QNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHP 638

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
            ++ I   L+ L  +M  EGY P     L +  + EK   L  HSEKLA+AFG++ +P  
Sbjct: 639 FSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPE 698

Query: 779 QTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             IR+ KNLRVC DCH   KF+SK   R+I++RD+ RFH F +G CSC  FW
Sbjct: 699 MPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 163/379 (43%), Gaps = 69/379 (18%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           +E   ID  T+ SIL  C  L +LE+GK++H+ I  +    D+  +GS LV M+  C  +
Sbjct: 270 AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRT-CYEDNVFVGSALVDMYSKCRSV 328

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-- 206
           +    VF ++    +  W  ++  Y + G  +E++ +F +MQ  GI  D +T   V+   
Sbjct: 329 RLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSC 388

Query: 207 -------------CLAVVGNSR-----------------RVKDAHKLFDELSDRDVVSWN 236
                        CLA+V   R                  ++DAH+LFDE+S  D VSW 
Sbjct: 389 ANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 448

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            ++ GY   G A++ +++F++ML+ G   D  T + VLS C+  G +  GR+        
Sbjct: 449 ALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYF------ 502

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
             S +   +   LD +  C                       MI  Y+R G    A    
Sbjct: 503 -HSMQQDHDIVPLDDHYTC-----------------------MIDLYSRSGWLKQAEEFI 538

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGK-DVHDYIKENDMQSSLYVSNALMDMYAK 415
           + M R    PD +   ++L AC   G +EIGK    + +K +    + YV   L  M+A 
Sbjct: 539 KQMPR---CPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYV--LLCSMHAS 593

Query: 416 CGSMADAESVFNQMPVKDI 434
            G   D   +   M  + +
Sbjct: 594 KGEWNDVAKLRRGMRDRQV 612



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 158/361 (43%), Gaps = 35/361 (9%)

Query: 43  HSSCTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTY 99
           +S C    ++ ++ + ++ K   ++ A I  + + G  E+A+ V    ++  I  D  T 
Sbjct: 322 YSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTL 381

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
            S++  CA+L SLE+G + H +   SG+     V  + LV ++  CG +++  R+F+++ 
Sbjct: 382 GSVISSCANLASLEEGAQFHCLALVSGLRPYVTV-SNALVTLYGKCGSIEDAHRLFDEMS 440

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
                 W  L+  Y++ G  KE++ LF+KM S G+  D  TF   +  L+    S  V  
Sbjct: 441 FHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTF---IGVLSACSRSGLVDK 497

Query: 220 AHKLFDEL-SDRDVVS----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
               F  +  D D+V     + CMI  Y  +G  ++  E  K+M       D     T+L
Sbjct: 498 GRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCP---DAFGWATLL 554

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV- 333
           S C   G +  G+      LK       S+   L  M++  G+ +   ++   M +R V 
Sbjct: 555 SACRLRGDMEIGKWAAENLLKLDPQNPASY-VLLCSMHASKGEWNDVAKLRRGMRDRQVK 613

Query: 334 ----VSW------TSMIAGYAREGVFDGAIR-----LFRGMVREGIEPDVYAITSILHAC 378
                SW        + +   +   F   I      L   MV EG +PDV   +S+LH  
Sbjct: 614 KEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDV---SSVLHDV 670

Query: 379 A 379
           A
Sbjct: 671 A 671


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 280/804 (34%), Positives = 423/804 (52%), Gaps = 54/804 (6%)

Query: 77  GNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G+LE+A+       + +I  +   + +++ LC  L+    G +V S +  SG+     V 
Sbjct: 124 GHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVA 183

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
            S L+ M    G + +  ++F +++      WN L+  YS  G   +S  +F  M+  G+
Sbjct: 184 NS-LISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGL 242

Query: 195 AADSYTFSCVL------------------KCL------------AVVG---NSRRVKDAH 221
                T  C L                   CL            A+V    ++ ++ DA 
Sbjct: 243 LRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAE 302

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
            LF  +S RD++SWN MIS Y+ NG     L+   ++L+     D  T  + L  C++ G
Sbjct: 303 FLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPG 362

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
           ALM GR VHA  L+      +   N+L+ MY KC  ++ A R+F+ M    VVS   +I 
Sbjct: 363 ALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIG 422

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA-CACDGLLEIGKDVHDYIKENDMQ 400
            YA       A+++F  M R  ++ +   I +IL +  + + L   G  +H Y       
Sbjct: 423 SYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFL 482

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM 450
           S  YVSN+L+ MYAKCG +  + +VF ++  + +VSWN MI A          L LF+ M
Sbjct: 483 SDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDM 542

Query: 451 LQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
             +    D + +A  + + ASLA+LE G ++HG  L+ G+  D +V NA +DMY KCG +
Sbjct: 543 RHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKM 602

Query: 510 VLARSLFDMIPAKDLIS---WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
                +  M+P   +     W  +I+GY  +G+  +A  TF  M   G  PD V+F+++L
Sbjct: 603 ---DEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLL 659

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            ACSH+GLVD+G  ++N M     + P ++H  C+VD+L R G  +EA +FIE MPV P+
Sbjct: 660 SACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPN 719

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
             IW SLL   R H  + +  K A+ + EL+P +   YVLL+N+YA + +W +V ++R  
Sbjct: 720 DLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSH 779

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +    L K P CSW++ K +V+ F  G  SH HA KI   L  + L+++  GY   T  A
Sbjct: 780 MKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLREVGYVADTSSA 839

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
           L + DE +KE  L  HSEKLA+A+G++ +P G T+R+ KNLRVC DCH + K +S    R
Sbjct: 840 LHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADCHLVFKLVSMVFDR 899

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           EIVLRD  RFHHFK G CSC  FW
Sbjct: 900 EIVLRDPYRFHHFKGGSCSCSDFW 923



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 198/389 (50%), Gaps = 15/389 (3%)

Query: 190 QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
           Q  G+  + Y  + +L    + G+ + V DA +LF E+ +R+VVSW  ++    +NG  E
Sbjct: 71  QKAGLMVNVYIGTALLH---LYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLE 127

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L  ++ M       +     TV+S C +    + G  V +  + +   +++S  N+L+
Sbjct: 128 EALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLI 187

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDV 368
            M    G +  A ++F +M ER  VSW ++++ Y+ EG+   + R+F  M R G +  D 
Sbjct: 188 SMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDA 247

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
             + S++  CA    +  G  VH       + S + V NAL++MY+  G +ADAE +F  
Sbjct: 248 TTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWN 307

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALERG 477
           M  +D++SWNTMI           AL     +L   E PD +T +  L AC+S  AL  G
Sbjct: 308 MSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDG 367

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           R +H   L+  +  +  V N+++ MY KC  +  A  +F ++P  D++S  I+I  Y + 
Sbjct: 368 RMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVL 427

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             G  A+  F  MR+  ++ + ++ +++L
Sbjct: 428 EDGTKAMQVFFWMRRGEVKLNYITIVNIL 456



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 190/414 (45%), Gaps = 30/414 (7%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN------CGAL 283
           R   SW   ISG +  G       + + M   G  +    + ++++ C        CGA 
Sbjct: 6   RTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGA- 64

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
               A+HA   KA     +     LL +Y     +  A R+F +M ER+VVSWT+++   
Sbjct: 65  ----AIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVAL 120

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE---IGKDVHDYIKENDMQ 400
           +  G  + A+  +R M RE I  +  A  +++  C   G LE    G  V  ++  + +Q
Sbjct: 121 SSNGHLEEALGYYRRMRRERIACNANAFATVVSLC---GSLEDEVAGLQVFSHVIVSGLQ 177

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM 450
             + V+N+L+ M    G + DAE +F +M  +D VSWN ++           +  +F  M
Sbjct: 178 RQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDM 237

Query: 451 LQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
            +      D  T+  ++  CAS   +  G  +H   LR G+ +   V NA+V+MY   G 
Sbjct: 238 RRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGK 297

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  A  LF  +  +DLISW  MI+ Y  +G   DA+ T   +      PD ++F S L A
Sbjct: 298 LADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGA 357

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           CS  G + +G R  + M  + ++   L     ++ +  +  ++ +A R  ++MP
Sbjct: 358 CSSPGALMDG-RMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMP 410



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 25/268 (9%)

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC-------ACDG 382
            R+  SW + I+G  R G    A  + RGM   G+    +A+ S++ AC       AC  
Sbjct: 5   HRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRAC-- 62

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI- 441
               G  +H   ++  +  ++Y+  AL+ +Y     + DA+ +F +MP +++VSW  ++ 
Sbjct: 63  ----GAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMV 118

Query: 442 -----GALDLFVAMLQNFEPDGV-----TMACILPACASLAALERGREIHGYILRHGISA 491
                G L+  +   +    + +       A ++  C SL     G ++  +++  G+  
Sbjct: 119 ALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQR 178

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
             +VAN+++ M    G +  A  LF  +  +D +SW  +++ Y   G    +   F+DMR
Sbjct: 179 QVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMR 238

Query: 552 QAG-IEPDEVSFISVLYACSHSGLVDEG 578
           + G +  D  +  S++  C+ S  V  G
Sbjct: 239 RGGLLRHDATTLCSLISVCASSDYVSYG 266


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/722 (34%), Positives = 388/722 (53%), Gaps = 82/722 (11%)

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
           RRVF++I    +F WN L+  YSK G       L  +M+S                    
Sbjct: 61  RRVFDRIPQPNLFSWNNLLLAYSKAG-------LISEMES-------------------- 93

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATM 270
                       F++L DRD V+WN +I GY  +G+    ++ +  M+ +   N+   T+
Sbjct: 94  -----------TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTL 142

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK---------------- 314
           +T+L   ++ G +  G+ +H   +K  F   +   + LL MY+                 
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202

Query: 315 ---------------CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                          CG ++ A+++F  M E+  VSW +MI G A+ G+   AI  FR M
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM 261

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             +G++ D Y   S+L AC   G +  GK +H  I   + Q  +YV +AL+DMY KC  +
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321

Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPAC 468
             A++VF++M  K++VSW  M+           A+ +F+ M ++  +PD  T+   + AC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A++++LE G + HG  +  G+     V+N++V +Y KCG +  +  LF+ +  +D +SWT
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            M++ Y   G   + I  F+ M Q G++PD V+   V+ ACS +GLV++G R+F +M  E
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             I P + HY+CM+DL SR+G L EA RFI  MP  PDA  W +LL  CR    +++ + 
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKW 561

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            AE + EL+P +   Y LL+++YA   KW+ V +LR  +  + +KK PG SWI+ KGK++
Sbjct: 562 AAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLH 621

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            F A   S P+  +I + L+ L  ++   GY P T +   + +E  K   L  HSE+LA+
Sbjct: 622 SFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAI 681

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           AFG++ +P+GQ IRV KNLRVC DCH   K +S    REI++RD+ RFH FKDG CSC  
Sbjct: 682 AFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGD 741

Query: 829 FW 830
           FW
Sbjct: 742 FW 743



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 228/470 (48%), Gaps = 53/470 (11%)

Query: 76  VGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLG 135
           VG   KA   +     + +   T  ++L+L +    +  GK++H  + + G      ++G
Sbjct: 119 VGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE-SYLLVG 177

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           S L++M+   G + + ++VF  +D+    ++N LM      G  +++L LF+ M+     
Sbjct: 178 SPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME----- 232

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                                             +D VSW  MI G   NG+A++ +E F
Sbjct: 233 ----------------------------------KDSVSWAAMIKGLAQNGLAKEAIECF 258

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
           +EM   G  +D     +VL  C   GA+  G+ +HA  ++  F   I   + L+DMY KC
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
             L  A  VF++M +++VVSWT+M+ GY + G  + A+++F  M R GI+PD Y +   +
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            ACA    LE G   H     + +   + VSN+L+ +Y KCG + D+  +FN+M V+D V
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438

Query: 436 SWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYI 484
           SW  M+ A          + LF  M+Q+  +PDGVT+  ++ AC+    +E+G+     +
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498

Query: 485 L-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIA 532
              +GI       + ++D++ + G L  A    + +P   D I WT +++
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 147/364 (40%), Gaps = 76/364 (20%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K+D   + S+L  C  L ++ +GK++H+ I  +    D   +GS L+ M+  C  L   +
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ-DHIYVGSALIDMYCKCKCLHYAK 325

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV- 211
            VF+++    V  W  ++  Y +TG  +E++ +F  MQ  GI  D YT    +   A V 
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385

Query: 212 -------------------------------GNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                          G    + D+ +LF+E++ RD VSW  M+S
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFS 299
            Y   G A + +++F +M+  G   D  T+  V+S C+  G +  G R       +    
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIV 505

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
             I   + ++D++S+ G L+ A+R    M                               
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGM------------------------------- 534

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND--------MQSSLYVSNALMD 411
                 PD    T++L AC   G LEIGK   + + E D        + SS+Y S    D
Sbjct: 535 ---PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWD 591

Query: 412 MYAK 415
             A+
Sbjct: 592 SVAQ 595



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 7/151 (4%)

Query: 465 LPACASLAALERGRE---IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
           +  C  L A  + R    IHG I+R     +  + N IV  Y        AR +FD IP 
Sbjct: 10  IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
            +L SW  ++  Y   G   +  +TF  +     + D V++  ++   S SGLV    + 
Sbjct: 70  PNLFSWNNLLLAYSKAGLISEMESTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKA 125

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           +N M  + +          M+ L S  G++S
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVS 156


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/573 (39%), Positives = 347/573 (60%), Gaps = 16/573 (2%)

Query: 271 VTVLSGCANCGALMFGRAVHA--FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            ++L  C +  AL  G+ +HA  + L   ++++++    L+ +Y+    L  A  +F+K+
Sbjct: 51  TSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLA--TKLVHLYAVSNSLLNARNLFDKI 108

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            ++++  W  +I GYA  G  D AI L+  M+  G+ PD + +  +L AC+    +  G+
Sbjct: 109 PKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGR 168

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---- 444
            +H+Y+ ++  +  L+V  AL+DMYAKCG + DA  VF+++ V+D V WN+M+ A     
Sbjct: 169 SIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNG 228

Query: 445 --DLFVAMLQNFEPDGV-----TMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
             D  +++ +    +GV     T+  ++ + A +A L  GREIHG+  RHG  ++  V  
Sbjct: 229 HPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKT 288

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           A++DMY KCG + +A +LF+ +  K ++SW  +I GY MHG    A+  F+ MR+    P
Sbjct: 289 ALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RP 347

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           D ++F+ VL ACS   L+DEG   +N+M  +  I P ++HY CM+DLL   G L EAY  
Sbjct: 348 DHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDL 407

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           I  M V PD+ +WG+LL  C+IH  V+LAE   E + ELEPD++G YV+LAN+YA++ KW
Sbjct: 408 IRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKW 467

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
           E V+KLR+ +  + +KKN  CSWIE+K KV  F+AG  SH ++  I + LKRL   M   
Sbjct: 468 EGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEA 527

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           GY P T     + +E EK   +C HSE+LA+AFG+++   G  + +TKNLR+C DCH   
Sbjct: 528 GYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAI 587

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KF+SK   REI +RD NR+H FK G CSC   W
Sbjct: 588 KFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 206/429 (48%), Gaps = 49/429 (11%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y S+LQ C D K+L  GK++H+     GI  +   L +KLV ++     L   R +F+KI
Sbjct: 50  YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQD-LATKLVHLYAVSNSLLNARNLFDKI 108

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSR 215
               +F+WN+L+  Y+  G    ++ L+ KM   G+  D++T   VLK    L+ +G  R
Sbjct: 109 PKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGR 168

Query: 216 R-----------------------------VKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                                         V DA ++FD++  RD V WN M++ Y  NG
Sbjct: 169 SIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNG 228

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
             ++ + + +EM   G     AT+VTV+S  A+   L +GR +H F  +  F        
Sbjct: 229 HPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKT 288

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L+DMY+KCG +  A+ +FE++ E+ VVSW ++I GYA  G+  GA+ LF  M +E   P
Sbjct: 289 ALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RP 347

Query: 367 DVYAITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           D      +L AC+   LL+ G+ +++  +++  +  ++     ++D+   CG + +A  +
Sbjct: 348 DHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDL 407

Query: 426 FNQMPVK-DIVSWNTMIGA---------LDLFVAMLQNFEPDG----VTMACILPACASL 471
              M VK D   W  ++ +          +L +  L   EPD     V +A +       
Sbjct: 408 IRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKW 467

Query: 472 AALERGREI 480
             +E+ R++
Sbjct: 468 EGVEKLRQV 476



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 190/366 (51%), Gaps = 15/366 (4%)

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
           L  +   LGIA   Y      K + +   S  + +A  LFD++  +++  WN +I GY  
Sbjct: 69  LHAQFYHLGIA---YNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAW 125

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           NG  +  + ++ +ML+ G   D  T+  VL  C+   A+  GR++H + +K+ + +++  
Sbjct: 126 NGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFV 185

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
              L+DMY+KCG +  A RVF+K+  R  V W SM+A YA+ G  D +I L R M   G+
Sbjct: 186 GAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGV 245

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
            P    + +++ + A    L  G+++H +   +  QS+  V  AL+DMYAKCGS+  A +
Sbjct: 246 RPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALA 305

Query: 425 VFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFEPDGVTMACILPACASLAAL 474
           +F ++  K +VSWN +I          GALDLF  M +   PD +T   +L AC+    L
Sbjct: 306 LFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDRPDHITFVGVLAACSRGRLL 365

Query: 475 ERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIA 532
           + GR ++  ++R +GI+        ++D+   CG L  A  L   +  K D   W  ++ 
Sbjct: 366 DEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLN 425

Query: 533 GYGMHG 538
              +HG
Sbjct: 426 SCKIHG 431



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 139/283 (49%), Gaps = 13/283 (4%)

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           Y  TS+L +C     L  GK +H       +  +  ++  L+ +YA   S+ +A ++F++
Sbjct: 48  YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDK 107

Query: 429 MPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG 477
           +P +++  WN +I           A+ L+  ML     PD  T+  +L AC++L+A+  G
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           R IH Y+++ G   D  V  A++DMY KCG ++ A  +FD I  +D + W  M+A Y  +
Sbjct: 168 RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQN 227

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G   ++I+   +M   G+ P E + ++V+ + +    +  G R  +   +    +   + 
Sbjct: 228 GHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYG-REIHGFGWRHGFQSNDKV 286

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
              ++D+ ++ G++  A    E +        W +++ G  +H
Sbjct: 287 KTALIDMYAKCGSVKVALALFERLR-EKRVVSWNAIITGYAMH 328



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 35/269 (13%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T   +L+ C+ L ++ +G+ +H  + +SG    D  +G+ L+ M+  CG + +  
Sbjct: 145 RPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWE-RDLFVGAALIDMYAKCGCVMDAG 203

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           RVF+KI      +WN ++  Y++ G+  ES+ L ++M + G+     T   V+   A V 
Sbjct: 204 RVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVA 263

Query: 213 -------------------NSR-------------RVKDAHKLFDELSDRDVVSWNCMIS 240
                              N +              VK A  LF+ L ++ VVSWN +I+
Sbjct: 264 CLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIIT 323

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC-FS 299
           GY  +G+A   L++F +M       D  T V VL+ C+    L  GRA++   ++    +
Sbjct: 324 GYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGIT 382

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
             +     ++D+   CG LD A  +   M
Sbjct: 383 PTVQHYTCMIDLLGHCGQLDEAYDLIRNM 411


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/676 (37%), Positives = 379/676 (56%), Gaps = 19/676 (2%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR--RVKDAHKLFDE 226
           ++  Y+KT   +      K++ +L I A  YT    L    V   S+   +  A KLFD 
Sbjct: 11  VIQTYAKTKRLRRG----KQLHALLICA-GYTPCTFLTNHLVNMYSKCGELDHALKLFDT 65

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           +  R++VSW  MISG   N    + +  F  M   G         + +  CA+ G++  G
Sbjct: 66  MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           + +H  ALK     E+   + L DMYSKCG +  A +VFE+M  +  VSWT+MI GY++ 
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 185

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G F+ A+  F+ M+ E +  D + + S L AC      + G+ VH  + +   +S ++V 
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245

Query: 407 NALMDMYAKCGSMADAESVFN-QMPVKDIVSWNTMIGA----------LDLFVAML-QNF 454
           NAL DMY+K G M  A +VF      +++VS+  +I            L +FV +  Q  
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
           EP+  T + ++ ACA+ AALE+G ++H  +++     D  V++ +VDMY KCG+L  A  
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQ 365

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
            FD I     I+W  +++ +G HG G DAI  F  M   G++P+ ++FIS+L  CSH+GL
Sbjct: 366 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGL 425

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           V+EG  +F  M     + P  EHY+C++DLL R G L EA  FI  MP  P+A  W S L
Sbjct: 426 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             CRIH + ++ +  AE + +LEP N+G  VLL+N+YA   +WE+V+ +R ++    +KK
Sbjct: 486 GACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK 545

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
            PG SW+++  K ++F A   SH     I   L  L  ++K  GY P T    ++ D+  
Sbjct: 546 LPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXM 605

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
           KE  L  HSE++A+AF ++++P G+ I V KNLRVC DCH   KF+SK   R+I++RD++
Sbjct: 606 KEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNS 665

Query: 815 RFHHFKDGRCSCRGFW 830
           RFHHF DG CSC  +W
Sbjct: 666 RFHHFTDGSCSCGDYW 681



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 222/418 (53%), Gaps = 18/418 (4%)

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D   +  V+   A    L  G+ +HA  + A ++      N L++MYSKCG+LD A+++F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           + M +R++VSWT+MI+G ++   F  AIR F GM   G  P  +A +S + ACA  G +E
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
           +GK +H    +  + S L+V + L DMY+KCG+M DA  VF +MP KD VSW  MI    
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 443 -------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  AL  F  M+ +    D   +   L AC +L A + GR +H  +++ G  +D  
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243

Query: 495 VANAIVDMYVKCGVLVLARSLFDM-IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
           V NA+ DMY K G +  A ++F +    ++++S+T +I GY         ++ F ++R+ 
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           GIEP+E +F S++ AC++   +++G +    +M+   + +P +   + +VD+  + G L 
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLE 361

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
            A +  + +   P    W SL+     H   K A K  E + +  ++P+   +  LL 
Sbjct: 362 HAIQAFDEIG-DPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLT 418



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 223/490 (45%), Gaps = 47/490 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           DT     ++Q  A  K L  GK++H+++  +G       L + LV M+  CG+L    ++
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYT-PCTFLTNHLVNMYSKCGELDHALKL 62

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+ +    +  W  ++   S+   F E++  F  M+  G     + FS  ++  A +G+ 
Sbjct: 63  FDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122

Query: 215 RRVKDAH--------------------------------KLFDELSDRDVVSWNCMISGY 242
              K  H                                K+F+E+  +D VSW  MI GY
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
              G  E+ L  FK+M++    +D   + + L  C    A  FGR+VH+  +K  F  +I
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGE-RSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
              N L DMYSK GD++ A  VF    E R+VVS+T +I GY      +  + +F  + R
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           +GIEP+ +  +S++ ACA    LE G  +H  + + +     +VS+ L+DMY KCG +  
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEH 362

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACAS 470
           A   F+++     ++WN+++           A+  F  M+ +  +P+ +T   +L  C+ 
Sbjct: 363 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSH 422

Query: 471 LAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWT 528
              +E G +  +     +G+       + ++D+  + G L  A+   + +P   +   W 
Sbjct: 423 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 482

Query: 529 IMIAGYGMHG 538
             +    +HG
Sbjct: 483 SFLGACRIHG 492



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 127/276 (46%), Gaps = 39/276 (14%)

Query: 43  HSSCTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTY 99
           +S C     +  + + + CK + ++ A I  + ++G  E+A+        E+  ID    
Sbjct: 151 YSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVL 210

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
           CS L  C  LK+ + G+ VHS + + G    D  +G+ L  M+   GD++    VF  ID
Sbjct: 211 CSTLGACGALKACKFGRSVHSSVVKLGFE-SDIFVGNALTDMYSKAGDMESASNVFG-ID 268

Query: 160 NG--KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------- 209
           +    V  +  L+  Y +T   ++ L +F +++  GI  + +TFS ++K  A        
Sbjct: 269 SECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQG 328

Query: 210 ------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                                   + G    ++ A + FDE+ D   ++WN ++S +  +
Sbjct: 329 TQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQH 388

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           G+ +  ++ F+ M++ G   +  T +++L+GC++ G
Sbjct: 389 GLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAG 424


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/594 (38%), Positives = 346/594 (58%), Gaps = 31/594 (5%)

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC------------ 315
           A++   L  CA  G      ++HA A+++    +    N LL++  K             
Sbjct: 50  ASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGP 109

Query: 316 ---GDLDGAI-----RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
              G L+ A      +VF++M ER  VSW ++I G A       A+ + R M R+G  PD
Sbjct: 110 SGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPD 169

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
            + ++++L   A    ++ G  VH Y  +N   + ++V ++L+DMYA C  M  +  VF+
Sbjct: 170 TFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFD 229

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALER 476
                D V WN+M+           AL +F  MLQ    P  VT + ++PA  +L+ L  
Sbjct: 230 SFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRL 289

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           G+++H Y++R   + +  ++++++DMY KCG + +AR +F+ I + D++SWT MI GY +
Sbjct: 290 GKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYAL 349

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG   +A   F  M    ++P+ ++F++VL ACSH+GLVD GW++FN M  +    P LE
Sbjct: 350 HGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLE 409

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           H A + D L R G+L EAY FI  M + P +++W +LL  CR+H    LAE+VA+ +FEL
Sbjct: 410 HCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFEL 469

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           EP + G +V+L+N+Y+ + +W E  +LR+ +  +G+KK P CSWIE+K K+++F+A   S
Sbjct: 470 EPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKS 529

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP   +I   L     +M R+GY P     L + +E +K   LCGHSEKLA+ FGI++ P
Sbjct: 530 HPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTP 589

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            G TIRV KNLRVC DCH   KF+SK   REIV+RD NRFH FKDG CSC  FW
Sbjct: 590 PGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 148/267 (55%), Gaps = 11/267 (4%)

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           K+FDE+ +RD VSWN +I G   +   ++ L + +EM   GF  D  T+ TVL   A C 
Sbjct: 125 KVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECA 184

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            +  G  VH +A+K  F  ++   ++L+DMY+ C  +D +++VF+   +   V W SM+A
Sbjct: 185 DIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLA 244

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           GYA+ G  + A+ +FR M++ G+ P     +S++ A     LL +GK +H Y+       
Sbjct: 245 GYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFND 304

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM- 450
           ++++S++L+DMY KCG++  A  VFN +   DIVSW  MI           A  LF  M 
Sbjct: 305 NIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERME 364

Query: 451 LQNFEPDGVTMACILPACASLAALERG 477
           L N +P+ +T   +L AC+    ++ G
Sbjct: 365 LGNVKPNHITFLAVLTACSHAGLVDNG 391



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 154/326 (47%), Gaps = 34/326 (10%)

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
           R+VF+++       WN L+   ++    +E+L + ++M   G   D++T S VL   A  
Sbjct: 124 RKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAEC 183

Query: 212 GNSRRVKDAH--------------------------------KLFDELSDRDVVSWNCMI 239
            + +R    H                                K+FD  SD D V WN M+
Sbjct: 184 ADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSML 243

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           +GY  NG  E+ L +F+ ML  G      T  +++    N   L  G+ +HA+ ++A F+
Sbjct: 244 AGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFN 303

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
             I  +++L+DMY KCG++D A RVF  +    +VSWT+MI GYA  G    A  LF  M
Sbjct: 304 DNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERM 363

Query: 360 VREGIEPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
               ++P+     ++L AC+  GL++ G K  +    +     SL    AL D   + G 
Sbjct: 364 ELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGD 423

Query: 419 MADAESVFNQMPVKDIVS-WNTMIGA 443
           + +A +  ++M +K   S W+T++ A
Sbjct: 424 LDEAYNFISEMKIKPTSSVWSTLLRA 449


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/704 (35%), Positives = 385/704 (54%), Gaps = 21/704 (2%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           +V  G+L E R++F+ +       W +L+  YS+   FKE+  LF +MQ  G   D  TF
Sbjct: 88  YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 147

Query: 202 SCVLK-CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
             +L  C      ++  +   ++     D  ++  N ++  Y  +   +   ++FKEM  
Sbjct: 148 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE 207

Query: 261 LGFNVDLATMVTVLSGCANCGA--LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
               +D  T   VL  CAN G   ++ G+ +H+F +K  F   +  +N LLD YSK   +
Sbjct: 208 ----IDSFTFAAVL--CANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSV 261

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
             A ++F++M E+  VS+  +I+GYA +G    A  LFR +     +   +   ++L   
Sbjct: 262 IDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIA 321

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
           +     E+G+ +H         S + V N+L+DMYAKCG   +AE +F  +  +  V W 
Sbjct: 322 SNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWT 381

Query: 439 TMIGA----------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH 487
            MI A          L LF  M Q +   D  T A +L A AS+A+L  G+++H +I++ 
Sbjct: 382 AMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS 441

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           G  ++    +A++D+Y KCG +  A   F  +P ++++SW  MI+ Y  +G     + +F
Sbjct: 442 GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSF 501

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
            +M  +G++PD VSF+ VL ACSHSGLV+EG   FN M     ++P+ EHYA +VD+L R
Sbjct: 502 KEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCR 561

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP-DNTGYYVL 666
           +G  +EA + +  MP+ PD  +W S+L  CRIH   +LA + A+ +F +E   +   YV 
Sbjct: 562 SGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVN 621

Query: 667 LANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESL 726
           ++N+YA A +WE V K+ + +  RG+KK P  SW+EIK + ++F A    HP  ++I   
Sbjct: 622 MSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKK 681

Query: 727 LKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKN 786
           +  L   M+  GY P T  AL N DE  K  +L  HSE+LA+AF +++ P G  I V KN
Sbjct: 682 IDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKN 741

Query: 787 LRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LR C DCH   K +SK   REI +RDS RFHHF+DG CSC  FW
Sbjct: 742 LRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 211/416 (50%), Gaps = 47/416 (11%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLED---GKKVHSIIC 123
           N  +  +C+   L+ A ++    E  +ID+ T+ ++L  CA++  L+D   G+++HS + 
Sbjct: 183 NTLVDSYCKSNRLDLACQLF--KEMPEIDSFTFAAVL--CANI-GLDDIVLGQQIHSFVI 237

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           ++  V +  V  + L F +     + + R++F+++       +N+++  Y+  G  K + 
Sbjct: 238 KTNFVWNVFVSNALLDF-YSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAF 296

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR---- 215
            LF+++Q        + F+ +L   +                        +VGNS     
Sbjct: 297 DLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMY 356

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
               + ++A  +F  L+ R  V W  MIS Y+  G  E+GL++F +M       D AT  
Sbjct: 357 AKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFA 416

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++L   A+  +L  G+ +H+F +K+ F   +   + LLD+Y+KCG +  A++ F++M +R
Sbjct: 417 SLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR 476

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK--- 388
           ++VSW +MI+ YA+ G  +  ++ F+ MV  G++PD  +   +L AC+  GL+E G    
Sbjct: 477 NIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF 536

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
           +    I + D +   Y S  ++DM  + G   +AE +  +MP+  D + W++++ A
Sbjct: 537 NSMTQIYKLDPRREHYAS--VVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 590



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 124/267 (46%), Gaps = 24/267 (8%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N ++  Y K G+L  A ++F+ M ER+ V+WT +I GY++   F  A  LF  M R G E
Sbjct: 82  NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 141

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           PD     ++L  C    +      V   I +    S L V N L+D Y K   +  A  +
Sbjct: 142 PDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQL 201

Query: 426 FNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYIL 485
           F +MP                        E D  T A +L A   L  +  G++IH +++
Sbjct: 202 FKEMP------------------------EIDSFTFAAVLCANIGLDDIVLGQQIHSFVI 237

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
           +     +  V+NA++D Y K   ++ AR LFD +P +D +S+ ++I+GY   G    A  
Sbjct: 238 KTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFD 297

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHS 572
            F +++    +  +  F ++L   S++
Sbjct: 298 LFRELQFTAFDRKQFPFATMLSIASNT 324



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 170/403 (42%), Gaps = 76/403 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSII 122
           +YN  I  +   G  + A ++    + +  D K +   ++L + ++    E G+++H+  
Sbjct: 278 SYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHA-- 335

Query: 123 CESGIVIDDG--VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            ++ +   D   ++G+ LV M+  CG  +E   +F  + +     W  ++  Y + G ++
Sbjct: 336 -QTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYE 394

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKC--------------------------------L 208
           E L LF KM+   + AD  TF+ +L+                                 L
Sbjct: 395 EGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALL 454

Query: 209 AVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
            V      +KDA + F E+ DR++VSWN MIS Y  NG AE  L+ FKEM+  G   D  
Sbjct: 455 DVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSV 514

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           + + VLS C++ G +  G               +   N++  +Y              K+
Sbjct: 515 SFLGVLSACSHSGLVEEG---------------LWHFNSMTQIY--------------KL 545

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             R    + S++    R G F+ A +L   M    I+PD    +S+L+AC      E+ +
Sbjct: 546 DPRR-EHYASVVDMLCRSGRFNEAEKL---MAEMPIDPDEIMWSSVLNACRIHKNQELAR 601

Query: 389 DVHDYI--KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
              D +   E    ++ YV+  + ++YA  G   +   V   M
Sbjct: 602 RAADQLFNMEELRDAAPYVN--MSNIYAAAGQWENVSKVHKAM 642



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            N ++  YVK G L  AR LFD +  +  ++WTI+I GY       +A   F  M++ G 
Sbjct: 81  TNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGT 140

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           EPD V+F+++L  C+   + ++  +    +  +   + +L     +VD   ++  L  A 
Sbjct: 141 EPDYVTFVTLLSGCNGHEMGNQITQVQTQI-IKLGYDSRLIVGNTLVDSYCKSNRLDLAC 199

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV----Y 671
           +  + MP   D+  + ++LC      ++ L +++  H F ++  N  + V ++N     Y
Sbjct: 200 QLFKEMP-EIDSFTFAAVLCANIGLDDIVLGQQI--HSFVIKT-NFVWNVFVSNALLDFY 255

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           ++ +   + +KL ++     + +  G S+       N+ ++G +     K    L + L+
Sbjct: 256 SKHDSVIDARKLFDE-----MPEQDGVSY-------NVIISGYAWDGKHKYAFDLFRELQ 303

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKL 766
                   FP      I ++ ++ E+    H++ +
Sbjct: 304 FTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTI 338


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/736 (33%), Positives = 392/736 (53%), Gaps = 48/736 (6%)

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYT 200
           V  GD+   R +F+ + +  V  W +LM  Y++  +F E+  LF++M   S     D  T
Sbjct: 90  VKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVT 149

Query: 201 FSCVLKCL--AVVGNS--------------------------------RRVKDAHKLFDE 226
           F+ +L     AV  N+                                RR+  A  LF+E
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           + ++D V++N +I+GY  +G+  + + +F +M   G      T   VL           G
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           + +HA ++   FS++ S  N +LD YSK   +     +F++M E   VS+  +I+ Y++ 
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
             ++ ++  FR M   G +   +   ++L   A    L++G+ +H         S L+V 
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFE 455
           N+L+DMYAKC    +AE +F  +P +  VSW  +I            L LF  M   N  
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
            D  T A +L A AS A+L  G+++H +I+R G   +    + +VDMY KCG +  A  +
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 509

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           F+ +P ++ +SW  +I+ +  +G G  AI  F  M ++G++PD VS + VL ACSH G V
Sbjct: 510 FEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFV 569

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           ++G  +F  M     I PK +HYACM+DLL R G  +EA + ++ MP  PD  +W S+L 
Sbjct: 570 EQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLN 629

Query: 636 GCRIHHEVKLAEKVAEHVFELEP-DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
            CRIH    LAE+ AE +F +E   +   YV ++N+YA A +WE+V+ +++ +  RG+KK
Sbjct: 630 ACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKK 689

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
            P  SW+E+  K+++F +   +HP+  +I   +  L  E++REGY P T   + + DE  
Sbjct: 690 VPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQM 749

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
           K  +L  HSE+LA+AF +++ P G  I V KNLR C DCH   K +SK  +REI +RD++
Sbjct: 750 KIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTS 809

Query: 815 RFHHFKDGRCSCRGFW 830
           RFHHF +G CSC  +W
Sbjct: 810 RFHHFSEGVCSCGDYW 825



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 230/489 (47%), Gaps = 46/489 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM-FVTCGDLKEGRR 153
           D  T+ ++L  C D        +VH+   + G   +  +  S ++   +     L     
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL----- 208
           +F +I       +N L+  Y K G + ES++LF KM+  G     +TFS VLK +     
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265

Query: 209 -------------------AVVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISG 241
                              A VGN          RV +   LFDE+ + D VS+N +IS 
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y      E  L  F+EM  +GF+       T+LS  AN  +L  GR +H  AL A     
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +   N+L+DMY+KC   + A  +F+ + +R+ VSWT++I+GY ++G+    ++LF  M  
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
             +  D     ++L A A    L +GK +H +I  +    +++  + L+DMYAKCGS+ D
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505

Query: 422 AESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACAS 470
           A  VF +MP ++ VSWN +I           A+  F  M+++  +PD V++  +L AC+ 
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565

Query: 471 LAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWT 528
              +E+G E        +GI+  +     ++D+  + G    A  L D +P   D I W+
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625

Query: 529 IMIAGYGMH 537
            ++    +H
Sbjct: 626 SVLNACRIH 634



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 165/349 (47%), Gaps = 21/349 (6%)

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG- 363
            NT++  + K GD+  A  +F+ M +R+VV+WT ++  YAR   FD A +LFR M R   
Sbjct: 82  TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141

Query: 364 -IEPDVYAITSILHACACDGLLE--IGKDVHDYIKE--NDMQSSLYVSNALMDMYAKCGS 418
              PD    T++L  C  D + +  +G+ VH +  +   D    L VSN L+  Y +   
Sbjct: 142 CTLPDHVTFTTLLPGCN-DAVPQNAVGQ-VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRR 199

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPA 467
           +  A  +F ++P KD V++NT+I           ++ LF+ M Q+  +P   T + +L A
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
              L     G+++H   +  G S D +V N I+D Y K   ++  R LFD +P  D +S+
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
            ++I+ Y        ++  F +M+  G +     F ++L   ++   +  G R  +    
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG-RQLHCQAL 378

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
               +  L     +VD+ ++     EA    + +P     + W +L+ G
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALISG 426



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 138/314 (43%), Gaps = 41/314 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSII 122
           +YN  I  + +    E ++      +    D + +   ++L + A+L SL+ G+++H   
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH--- 374

Query: 123 CESGIVIDDGVL--GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           C++ +   D +L  G+ LV M+  C   +E   +F  +       W  L+  Y + G   
Sbjct: 375 CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHG 434

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVV----------------GNSRRV------- 217
             L LF KM+   + AD  TF+ VLK  A                  GN   V       
Sbjct: 435 AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLV 494

Query: 218 ---------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                    KDA ++F+E+ DR+ VSWN +IS +  NG  E  +  F +M+  G   D  
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554

Query: 269 TMVTVLSGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           +++ VL+ C++CG +  G     A +     + +      +LD+  + G    A ++ ++
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614

Query: 328 MG-ERSVVSWTSMI 340
           M  E   + W+S++
Sbjct: 615 MPFEPDEIMWSSVL 628


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/699 (35%), Positives = 393/699 (56%), Gaps = 38/699 (5%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G + E R++F+  D+  +  WN ++  Y      +++  LF +M    I + +   S  +
Sbjct: 31  GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYM 90

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K       +  + +A K+FD + +R+VVSW  ++ GY+ NG  +    +F +M      V
Sbjct: 91  K-------NGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN-KV 142

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT-LLDMYSKCGDLDGAIRV 324
               M+         G L  GR   A  L      + +   T ++    K G +D A  +
Sbjct: 143 SWTVMLI--------GFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F++M ERSV++WT+M+ GY +    D A ++F  M     E    + TS+L     +G +
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRI 250

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
           E  +++ + +        +   NA++    + G +A A  VF+ M  ++  SW T+I   
Sbjct: 251 EDAEELFEVMP----VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIH 306

Query: 443 --------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                   ALDLF+ M  Q   P   T+  IL  CASLA+L  G+++H  ++R     D 
Sbjct: 307 ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDV 366

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            VA+ ++ MY+KCG LV ++ +FD  P+KD+I W  +I+GY  HG G +A+  F +M  +
Sbjct: 367 YVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLS 426

Query: 554 G-IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           G  +P+EV+F++ L ACS++G+V+EG + +  M     ++P   HYACMVD+L R G  +
Sbjct: 427 GSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFN 486

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           EA   I+ M V PDA +WGSLL  CR H ++ +AE  A+ + E+EP+N+G Y+LL+N+YA
Sbjct: 487 EAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYA 546

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG-SSHPHAKKIESLLKRLR 731
              +W +V +LR+ +  R ++K+PGCSW E++ KV+ F  GG +SHP  + I  +L  L 
Sbjct: 547 SQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELD 606

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
             ++  GY P   YAL + DE EK  +L  HSE+LA+A+ +L L  G  IRV KNLRVC 
Sbjct: 607 GLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCS 666

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   K +SK   REI+LRD+NRFHHF++G CSC+ +W
Sbjct: 667 DCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 153/340 (45%), Gaps = 59/340 (17%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N  +   S+ G +  A ++F+    +S+ SW SM+AGY    +   A +LF  M      
Sbjct: 21  NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74

Query: 366 PD--VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           PD  + +   ++     +G ++  + V D + E ++ S      AL+  Y   G +  AE
Sbjct: 75  PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS----WTALVKGYVHNGKVDVAE 130

Query: 424 SVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHG 482
           S+F +MP K+ VSW  M+      +  LQ+    D   +  ++P   ++A   R   IHG
Sbjct: 131 SLFWKMPEKNKVSWTVML------IGFLQDGRIDDACKLYEMIPDKDNIA---RTSMIHG 181

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
                                 K G +  AR +FD +  + +I+WT M+ GYG +    D
Sbjct: 182 --------------------LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDD 221

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC-- 600
           A   F+ M     E  EVS+ S+L     +G +++    F +M     ++P +   AC  
Sbjct: 222 ARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVM----PVKPVI---ACNA 270

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           M+  L + G +++A R  + M    DA+ W +++   +IH
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDAS-WQTVI---KIH 306



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 26/263 (9%)

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEP-------D 457
            +N  +   ++ G + +A  +F+    K I SWN+M+           N  P       D
Sbjct: 19  TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGY------FANLMPRDARKLFD 72

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVAN--AIVDMYVKCGVLVLARSL 515
            +    I+     ++   +  EI        +  +RNV +  A+V  YV  G + +A SL
Sbjct: 73  EMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           F  +P K+ +SWT+M+ G+   G   DA   +  +     + D ++  S+++     G V
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRV 188

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           DE    F+ M      E  +  +  MV    +   + +A +  ++MP   + + W S+L 
Sbjct: 189 DEAREIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WTSMLM 242

Query: 636 GCRIHHEVKLAEKVAEHVFELEP 658
           G   +  ++ AE++ E V  ++P
Sbjct: 243 GYVQNGRIEDAEELFE-VMPVKP 264



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 140/341 (41%), Gaps = 51/341 (14%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  SIL +CA L SL  GK+VH+ +      +D  V  S L+ M++ CG+L + + +F++
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYV-ASVLMTMYIKCGELVKSKLIFDR 391

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSRR 216
             +  + +WN ++  Y+  G  +E+L +F +M   G    +  TF   L   +  G    
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG---M 448

Query: 217 VKDAHKLFDELSD----RDVVS-WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
           V++  K+++ +      + + + + CM+      G   + +E+   M       D A   
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT---VEPDAAVWG 505

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT---LLDMYSKCGDLDGAIRVFEKM 328
           ++L  C     L     V  F  K     E   + T   L +MY+  G       + + M
Sbjct: 506 SLLGACRTHSQL----DVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLM 561

Query: 329 GERSV-----VSWTSM---IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
             R V      SWT +   +  + R G+                 P+  +I  IL     
Sbjct: 562 KTRLVRKSPGCSWTEVENKVHAFTRGGI--------------NSHPEQESILKILD--EL 605

Query: 381 DGLL-EIGKD------VHDYIKENDMQSSLYVSNALMDMYA 414
           DGLL E G +      +HD  +E  + S  Y S  L   YA
Sbjct: 606 DGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYA 646



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 21/202 (10%)

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
            AN  +    + G +  AR LFD   +K + SW  M+AGY  +    DA   F++M    
Sbjct: 19  TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           I    +S+  ++     +G +DE  + F++M      E  +  +  +V      G +  A
Sbjct: 79  I----ISWNGLVSGYMKNGEIDEARKVFDLMP-----ERNVVSWTALVKGYVHNGKVDVA 129

Query: 615 YRFIEMMPVAPDATIWGSLLCGC----RIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
                 MP   +   W  +L G     RI    KL E + +       DN     ++  +
Sbjct: 130 ESLFWKMP-EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK------DNIARTSMIHGL 182

Query: 671 YAEAEKWEEVKKLREKISRRGL 692
             E  + +E +++ +++S R +
Sbjct: 183 CKEG-RVDEAREIFDEMSERSV 203


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/690 (36%), Positives = 387/690 (56%), Gaps = 47/690 (6%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +DT+    +L+ C + KSL+ GK +H  +   G+  +D  L   L+  +++C      + 
Sbjct: 1   MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQ-NDIFLCKTLINQYLSCHLYDHAKC 59

Query: 154 VFNKIDNG-KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLK----- 206
           VF+ ++N  ++ +WN LM  Y+K   + E+L LF+K+     +  DSYT+  V K     
Sbjct: 60  VFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGL 119

Query: 207 -----------CLA--------VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMI 239
                      CL         VVG+S           + A  LF+E+ ++DV  WN +I
Sbjct: 120 HRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVI 179

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           S Y  +G  +  LE F  M   GF  +  T+ T +S CA    L  G  +H   + + F 
Sbjct: 180 SCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFL 239

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +   ++ L+DMY KCG L+ AI +FE+M +++VV+W SMI+GY  +G     I+LF+ M
Sbjct: 240 LDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRM 299

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             EG++P +  ++S++  C+    L  GK VH Y   N +Q  ++V+++LMD+Y KCG +
Sbjct: 300 YNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKV 359

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNF-EPDGVTMACILPAC 468
             AE +F  +P   +VSWN MI           AL LF  M +++ E D +T   +L AC
Sbjct: 360 ELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTAC 419

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           + LAALE+G+EIH  I+   +  +  V  A++DMY KCG +  A S+F  +P +DL+SWT
Sbjct: 420 SQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWT 479

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI  YG HG    A+  F +M Q+ ++PD V+F+++L AC H+GLVDEG  +FN M   
Sbjct: 480 SMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINV 539

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP-VAPDATIWGSLLCGCRIHHEVKLAE 647
             I P++EHY+C++DLL R G L EAY  ++  P +  D  +  +L   CR+H  + L  
Sbjct: 540 YGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGA 599

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
           ++A  + + +PD++  Y+LL+N+YA A KW+EV+ +R K+   GLKKNPGCSWIEI  K+
Sbjct: 600 EIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKI 659

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
             F    +SH H + +   L  L   M+ E
Sbjct: 660 LPFFVEDNSHLHLELVFKCLSYLSDHMEDE 689



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 42/279 (15%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           +E  K    T  S++ +C+    L +GK VH     + I   D  + S L+ ++  CG +
Sbjct: 301 NEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQ-PDVFVNSSLMDLYFKCGKV 359

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           +   ++F  I   KV  WN+++  Y   G   E+L LF +M+   + +D+ TF+ VL   
Sbjct: 360 ELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTAC 419

Query: 209 AVVGNSRRVKDAHKLFDE--------------------------------LSDRDVVSWN 236
           + +    + K+ H L  E                                L  RD+VSW 
Sbjct: 420 SQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWT 479

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL-----MFGRAVHA 291
            MI+ Y ++G A   LE+F EML      D    + +LS C + G +      F + ++ 
Sbjct: 480 SMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINV 539

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           + +       +   + L+D+  + G L  A  + ++  E
Sbjct: 540 YGIIP----RVEHYSCLIDLLGRAGRLHEAYEILQQNPE 574


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/713 (34%), Positives = 381/713 (53%), Gaps = 85/713 (11%)

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDEL--SDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
           S     +A    + R++DA   FD +  + RD V  N M+S +    +A   + VF  +L
Sbjct: 93  SPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL 152

Query: 260 NLG-FNVDLATMVTVLSGCANCGALMFGR--AVHAFALKACFSKEISFNNTLLDMYSKC- 315
             G    D  +   ++S       L       +H   LK+  +  +S +N L+ +Y KC 
Sbjct: 153 GSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCD 212

Query: 316 ---------------------------------GDLDGAIRVFEKMGERSVVSWTSMIAG 342
                                            GD++ A  VFE++  +  V W +MI+G
Sbjct: 213 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISG 272

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI---KENDM 399
           Y + G+   A  LFR MV E +  D +  TS+L ACA  G    GK VH  I   + N +
Sbjct: 273 YVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFV 332

Query: 400 -QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------------- 442
            +++L V+NAL+ +Y+K G +  A+ +F+ M +KD+VSWNT++                 
Sbjct: 333 PEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFK 392

Query: 443 -------------------------ALDLFVAM-LQNFEPDGVTMACILPACASLAALER 476
                                    AL LF  M  ++ +P   T A  + AC  L AL+ 
Sbjct: 393 VMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKH 452

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           GR++H ++++ G  A  +  NA++ MY KCG +  AR +F ++P  D +SW  MI+  G 
Sbjct: 453 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQ 512

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG G +A+  F+ M   GI+PD +SF+++L AC+H+GLVDEG+ +F  M+ +  I P  +
Sbjct: 513 HGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGED 572

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HYA ++DLL R+G + EA   I+ MP  P  +IW ++L GCR + +++     A+ +F +
Sbjct: 573 HYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRM 632

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
            P + G Y+LL+N Y+ A +W +  ++R+ +  RG+KK PGCSWIE+  K+++F+ G + 
Sbjct: 633 IPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTK 692

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           HP A+++   L+ +   M++ GY P T++ L + +  EKE  L  HSEKLA+ FG+L LP
Sbjct: 693 HPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLP 752

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
            G T+ V KNLR+CGDCH    FMSK   REIV+RD  RFHHFKDG CSC G 
Sbjct: 753 PGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCEGL 805



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 166/383 (43%), Gaps = 75/383 (19%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D +  + +V  +V  GD+   R VF ++D     +WN ++  Y ++G   ++  LF++M 
Sbjct: 231 DDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMV 290

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAH----------------------------- 221
           S  +  D +TF+ VL   A  G     K  H                             
Sbjct: 291 SEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKG 350

Query: 222 -------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV- 273
                  ++FD ++ +DVVSWN ++SGYI +G  +K +EVFK M    +  DL+ MV V 
Sbjct: 351 GKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM---PYKNDLSWMVMVS 407

Query: 274 ---------------------------------LSGCANCGALMFGRAVHAFALKACFSK 300
                                            ++ C   GAL  GR +HA  ++  F  
Sbjct: 408 GYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEA 467

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
             S  N LL MY+KCG ++ A  VF  M     VSW +MI+   + G    A+ LF  MV
Sbjct: 468 SNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMV 527

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA-LMDMYAKCGSM 419
            EGI+PD  +  +IL AC   GL++ G    + +K +   S      A L+D+  + G +
Sbjct: 528 AEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRI 587

Query: 420 ADAESVFNQMPVKDIVS-WNTMI 441
            +A  +   MP +   S W  ++
Sbjct: 588 GEARDLIKTMPFEPTPSIWEAIL 610


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/737 (33%), Positives = 389/737 (52%), Gaps = 46/737 (6%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           LV      G + E       +     F+ N+++  ++  G    +L  ++ M   G   D
Sbjct: 47  LVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106

Query: 198 SYTFSCVLKCLAVVGNSRR--------------------------------VKDAHKLFD 225
            +TF  V+KC A +G                                    V+DA ++FD
Sbjct: 107 RFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFD 166

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN-LGFNVDLATMVTVLSGCANCGALM 284
            +  RD+V+WN M+ GY++NG+    L  F+EM + L    D   ++  L+ C    + M
Sbjct: 167 GMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSM 226

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            G+ +H + ++    ++I    +LLDMY KCG++  A  VF  M  R+VV+W  MI GYA
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
                D A   F  M  EG++ +V    ++L ACA       G+ VH Y+        + 
Sbjct: 287 LNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVV 346

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QN 453
           +  AL++MY K G +  +E +F ++  K +VSWN MI A          + LF+ +L Q 
Sbjct: 347 LETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQP 406

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
             PD  TM+ ++PA   L +L   R+IH YI+  G + +  + NA++ MY + G +V +R
Sbjct: 407 LYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASR 466

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
            +FD + +KD+ISW  MI GY +HG G  A+  F++M+  G++P+E +F+SVL ACS SG
Sbjct: 467 EIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSG 526

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
           LVDEGW  FN+M  E  + P++EHY CM DLL R G+L E  +FIE MP+ P + +WGSL
Sbjct: 527 LVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSL 586

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
           L   R  +++ +AE  AE +F+LE DNTG Y++L+++YA+A +WE+V+++R  +  +GL+
Sbjct: 587 LTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLR 646

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           +    S +E+      F  G  SH  ++ I  +   L  +++         Y +  A   
Sbjct: 647 RTEPISLVELHSTACSFANGDMSHSQSRTIHEVSNILSRKIEETDDTRNQSYPVPVA--T 704

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
                   HS +LA+ FG+++   G  I V KN+R+C  CH   K +S+ + R IV+ DS
Sbjct: 705 RTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDS 764

Query: 814 NRFHHFKDGRCSCRGFW 830
             +H F DG C C  +W
Sbjct: 765 KIYHEFSDGSCCCGDYW 781



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 209/432 (48%), Gaps = 45/432 (10%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           + ++ D  T+  +++ CA L  L++G+  H ++ + G+  D     S LV  +   G ++
Sbjct: 101 DGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNS-LVAFYAKLGLVE 159

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSCVLK-- 206
           +  RVF+ +    +  WN ++  Y   G    +L  F++M  +L +  DS      L   
Sbjct: 160 DAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAAC 219

Query: 207 CLAV----------------------VGNSR--------RVKDAHKLFDELSDRDVVSWN 236
           CL V                      VG S          V  A  +F  +  R VV+WN
Sbjct: 220 CLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWN 279

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
           CMI GY  N   ++  + F +M   G  V++ T + +L+ CA   + ++GR+VH + ++ 
Sbjct: 280 CMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRR 339

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            F   +     LL+MY K G ++ + ++F K+  +++VSW +MIA Y  + ++  AI LF
Sbjct: 340 QFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLF 399

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             ++ + + PD + +++++ A    G L   + +H YI       +  + NA++ MYA+ 
Sbjct: 400 LELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARS 459

Query: 417 GSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACIL 465
           G +  +  +F++M  KD++SWNTMI           AL++F  M  N  +P+  T   +L
Sbjct: 460 GDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVL 519

Query: 466 PACASLAALERG 477
            AC+    ++ G
Sbjct: 520 TACSVSGLVDEG 531



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 85/378 (22%), Positives = 164/378 (43%), Gaps = 46/378 (12%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           +E  +++  T  ++L  CA  +S   G+ VH  +      +   VL + L+ M+   G +
Sbjct: 303 AEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQF-LPHVVLETALLEMYGKVGKV 361

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           +   ++F KI N  +  WN ++  Y     + E++ LF ++ +  +  D +T S V+   
Sbjct: 362 ESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAF 421

Query: 209 AVVGNSRRVKDAH--------------------------------KLFDELSDRDVVSWN 236
            ++G+ R  +  H                                ++FD++  +DV+SWN
Sbjct: 422 VLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWN 481

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MI GY  +G  +  LE+F EM   G   + +T V+VL+ C+  G +  G       L+ 
Sbjct: 482 TMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQE 541

Query: 297 C-FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFD---- 350
                +I     + D+  + GDL   ++  E M  + +   W S++     +   D    
Sbjct: 542 YGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEY 601

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A R+F+    E      Y + S ++A A  G  E  + V   +KE  ++ +  +S  L+
Sbjct: 602 AAERIFQ---LEHDNTGCYIVLSSMYADA--GRWEDVERVRLLMKEKGLRRTEPIS--LV 654

Query: 411 DMYAKCGSMADAESVFNQ 428
           ++++   S A+ +   +Q
Sbjct: 655 ELHSTACSFANGDMSHSQ 672


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 278/805 (34%), Positives = 405/805 (50%), Gaps = 94/805 (11%)

Query: 113 EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHE 172
           E+ +++H    + G V  +  L + L+ ++V  GDL   +++F+++ N  +  W  L+  
Sbjct: 116 EEARELHLQSIKYGFV-GNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 174

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS------------------ 214
           Y++ G   E+   F+ M   G   + Y F   L+     G S                  
Sbjct: 175 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 234

Query: 215 -----------------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                                DA  +FD +  R+ +SWN +IS Y   G A    ++F  
Sbjct: 235 SDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSS 294

Query: 258 MLN--LGFNV---DLATMVTVLSGCANCGALMFGRAVHAFALKACFS-KEISFNNTLLDM 311
           M    LGF+    D  +  +VL           GR VHA  ++   +  +++  N L++M
Sbjct: 295 MQKEGLGFSFKPNDAFSEFSVLEE-----GRRKGREVHAHVIRTGLNDNKVAIGNGLVNM 349

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR-------------------------- 345
           Y+K G +  A  VFE M E+  VSW S+I+G  +                          
Sbjct: 350 YAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVI 409

Query: 346 ------EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
                 E     A++ F  M+R G         +IL A +   L E+   +H  + +  +
Sbjct: 410 GALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCL 469

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTMIG----------ALDLFV 448
                + NAL+  Y KCG M + E +F +M   +D VSWN+MI           A+DL  
Sbjct: 470 SDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVW 529

Query: 449 AMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            M+Q  +  D  T A IL ACAS+A LERG E+H   +R  + +D  V +A+VDMY KCG
Sbjct: 530 FMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCG 589

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            +  A   F+++P +++ SW  MI+GY  HG G  A+  F  M   G  PD V+F+ VL 
Sbjct: 590 RIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLS 649

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSH G V+EG+  F  M     + P++EH++CMVDLL R G L E   FI  MP+ P+ 
Sbjct: 650 ACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNV 709

Query: 628 TIWGSLLCG-CRIH-HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
            IW ++L   CR +    +L  + AE + ELEP N   YVLLAN+YA  EKWE+V K R 
Sbjct: 710 LIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKART 769

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +    +KK  GCSW+ +K  V++FVAG   HP    I   L+ L  +M+  GY P+T+Y
Sbjct: 770 AMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKY 829

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
           AL + +   KE  L  HSEK+A+AF +L   +   IR+ KNLRVCGDCH    ++SK   
Sbjct: 830 ALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVG 888

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           R+IVLRDSNRFHHF+DG+CSC  +W
Sbjct: 889 RQIVLRDSNRFHHFEDGKCSCGDYW 913



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 20/291 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  +     L KAM++++    +  ++D+ T+ +IL  CA + +LE G +VH+  
Sbjct: 507 SWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACG 566

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +  +  D V+GS LV M+  CG +    R F  +    V+ WN ++  Y++ G+ +++
Sbjct: 567 IRA-CLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKA 625

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE---LSDRDVVSWNCMI 239
           L LF +M   G   D  TF  VL   + VG      +  K   E   LS R V  ++CM+
Sbjct: 626 LKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPR-VEHFSCMV 684

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC--ANCGALMFGRAVHAFALKAC 297
                 G A K  EV   + ++    ++    TVL  C  AN      GR      L+  
Sbjct: 685 DLL---GRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLE-- 739

Query: 298 FSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSV-----VSWTSMIAG 342
              + + N  LL +MY+     +   +    M E +V      SW +M  G
Sbjct: 740 LEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDG 790


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/691 (35%), Positives = 394/691 (57%), Gaps = 44/691 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  +++ C  L S+  G+ VH  I   G  +D  V GS L+  +   G + + R +
Sbjct: 146 DKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFV-GSSLIKFYSENGCIHDARYL 204

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------- 207
           F+++ +    +WN++++ Y K G++  +  +F +M+      +S TF+CVL         
Sbjct: 205 FDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMI 264

Query: 208 -------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                    LA+      + DA +LFD +   D+V+WN MISGY
Sbjct: 265 NFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGY 324

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           + NG  ++   +F EM++     D  T  + L   +    L  G+ +H + ++   S ++
Sbjct: 325 VQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDV 384

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              + L+D+Y KC D++ A ++F++     +V  T+MI+GY   G+ + A+ +FR +++E
Sbjct: 385 FLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQE 444

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
            +  +   + S+L ACA    L +GK++H +I +N    S YV +A+MDMYAKCG +  A
Sbjct: 445 RMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLA 504

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
              F  +  KD V WN+MI           A+DLF  M +   + D V+++  L ACA+L
Sbjct: 505 HQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANL 564

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            AL  G+EIH +++R    +D    +A++DMY KCG L LA  +FD +  K+ +SW  +I
Sbjct: 565 PALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSII 624

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           A YG HG   D++  F+ M   GI+PD V+F++++ AC H+G VDEG  +F  M  E  I
Sbjct: 625 AAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGI 684

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
             ++EHYACMVDL  R G L+EA+  I  MP +PDA +WG+LL  CR+H  V+LAE  + 
Sbjct: 685 MARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASR 744

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
           ++F+L+P N+GYYVLL+NV+A A +WE V K+R  +  RG++K PGCSWI++    ++FV
Sbjct: 745 NLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFV 804

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           A   SHP + +I  LLK L LE+++EGY P+
Sbjct: 805 AADRSHPQSSQIYLLLKNLFLELRKEGYVPQ 835



 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 193/614 (31%), Positives = 296/614 (48%), Gaps = 50/614 (8%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           SILQ C D   L  G++ H+ +  +GI  + G+LG+KL+ M+V CG   + + +F ++  
Sbjct: 51  SILQTCTDPSGLSQGRQAHAQMLVNGIGYN-GILGTKLLGMYVLCGAFLDAKNIFYQLRL 109

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------------- 207
                WN ++  ++  G F  +L  + KM   G   D YTF  V+K              
Sbjct: 110 WCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVV 169

Query: 208 ----------LAVVGNSRRVK---------DAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                     L V   S  +K         DA  LFD +  +D V WN M++GY+ NG  
Sbjct: 170 HDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDW 229

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           +    VF EM     N +  T   VLS CA+   + FG  +H   + +    +    NTL
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTL 289

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           L MY+KCG L  A R+F+ M +  +V+W  MI+GY + G  D A  LF  M+   ++PD 
Sbjct: 290 LAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDS 349

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
              +S L   +    L  GK++H YI  N +   +++ +AL+D+Y KC  +  A  +F+Q
Sbjct: 350 ITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQ 409

Query: 429 MPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERG 477
               DIV    MI           AL++F  +LQ     + VT+A +LPACA LAAL  G
Sbjct: 410 RTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLG 469

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           +E+HG+IL++G      V +AI+DMY KCG L LA   F  I  KD + W  MI     +
Sbjct: 470 KELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQN 529

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPKLE 596
           G   +AI  F  M  AG + D VS  + L AC++   +  G      MMR        L 
Sbjct: 530 GKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGA--FRSDLF 587

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF-- 654
             + ++D+ S+ GNL  A R  + M    + + W S++     H  +K +  +   +   
Sbjct: 588 AESALIDMYSKCGNLDLACRVFDTMEEKNEVS-WNSIIAAYGNHGRLKDSLNLFHGMLGD 646

Query: 655 ELEPDNTGYYVLLA 668
            ++PD+  +  +++
Sbjct: 647 GIQPDHVTFLAIIS 660



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 212/419 (50%), Gaps = 41/419 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  I  + + G +++A  + +   S + K D+ T+ S L L ++  +L  GK++H  I 
Sbjct: 317 WNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYII 376

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            +G+ +D   L S L+ ++  C D++  R++F++     + +   ++  Y   G    +L
Sbjct: 377 RNGVSLDV-FLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNAL 435

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS----- 214
            +F+ +    + A+S T + VL   A                         VG++     
Sbjct: 436 EIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMY 495

Query: 215 ---RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
               R+  AH+ F  +SD+D V WN MI+    NG  E+ +++F++M   G   D  ++ 
Sbjct: 496 AKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSIS 555

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
             LS CAN  AL +G+ +HAF ++  F  ++   + L+DMYSKCG+LD A RVF+ M E+
Sbjct: 556 AALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEK 615

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           + VSW S+IA Y   G    ++ LF GM+ +GI+PD     +I+ AC   G  ++ + +H
Sbjct: 616 NEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAG--QVDEGIH 673

Query: 392 DY---IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
            +    +E  + + +     ++D++ + G + +A  + N MP   D   W T++GA  L
Sbjct: 674 YFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRL 732



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 162/320 (50%), Gaps = 11/320 (3%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V++L  C +   L  GR  HA  L             LL MY  CG    A  +F ++ 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
                 W  MI G+   G FD A+  +  M+  G  PD Y    ++ AC     + +G+ 
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-------- 441
           VHD I+    +  ++V ++L+  Y++ G + DA  +F++MP KD V WN M+        
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 442 --GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              A  +F+ M +    P+ VT AC+L  CAS   +  G ++HG ++  G+  D  VAN 
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           ++ MY KCG L  AR LFDM+P  DL++W  MI+GY  +GF  +A   F++M  A ++PD
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPD 348

Query: 559 EVSFISVLYACSHSGLVDEG 578
            ++F S L   S    + +G
Sbjct: 349 SITFSSFLPLLSEGATLRQG 368



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 87/398 (21%), Positives = 159/398 (39%), Gaps = 72/398 (18%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
            E+ + ++ T  S+L  CA L +L  GK++H  I ++G       +GS ++ M+  CG L
Sbjct: 443 QERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHG-GSCYVGSAIMDMYAKCGRL 501

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
               + F  I +     WN ++   S+ G  +E++ LF++M   G   D  + S  L   
Sbjct: 502 DLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC 561

Query: 209 AVVGNSRRVKDAH--------------------------------KLFDELSDRDVVSWN 236
           A +      K+ H                                ++FD + +++ VSWN
Sbjct: 562 ANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWN 621

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            +I+ Y  +G  +  L +F  ML  G   D  T + ++S C + G +     +H F    
Sbjct: 622 SIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQV--DEGIHYF---R 676

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
           C ++E+                     +  +M       +  M+  + R G  + A  + 
Sbjct: 677 CMTEELG--------------------IMARMEH-----YACMVDLFGRAGRLNEAFGMI 711

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M      PD     ++L AC   G +E+ +     + + D Q+S Y    L +++A  
Sbjct: 712 NSMP---FSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYV-LLSNVHANA 767

Query: 417 G---SMADAESVFNQMPVKDI--VSWNTMIGALDLFVA 449
           G   S+    S+  +  V+ +   SW  +     +FVA
Sbjct: 768 GQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVA 805


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/690 (37%), Positives = 389/690 (56%), Gaps = 47/690 (6%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D +    +L+   + KSL+ GK +H  +   G+  +D  +   L+ ++V+C      + 
Sbjct: 1   MDARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQ-NDVYVCKNLISLYVSCNLFDYAKN 59

Query: 154 VFNKIDNG-KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLK----- 206
           VF+ I+N  ++ + N LM  Y++   + E+L LF K+     +  DSYT+  VLK     
Sbjct: 60  VFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGL 119

Query: 207 -----------CLA--------VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMI 239
                      CL         VVG+S           + A KLFDE+ D+DV  WN +I
Sbjct: 120 RRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVI 179

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           S Y  +G  E+ L  F  M   GF  D  T+ T +S CA    L  GR +H   + + F 
Sbjct: 180 SCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFR 239

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +   +  L+DMY KCG L+ AI VFE+M  ++VV+W SMI GY  +G     I+LF+ M
Sbjct: 240 MDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRM 299

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             EG++P +  +TS L AC+    L  GK VH YI  N +Q  ++++++LMD+Y KCG +
Sbjct: 300 YSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKV 359

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNF-EPDGVTMACILPAC 468
             AE++F  MP    VSWN MI           AL LF  M ++F EPD +T   +L AC
Sbjct: 360 ESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAAC 419

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           + LAALE+GREIH  I+   +  +  V  A++DMY KCG +  A  +F  +P +DL+SWT
Sbjct: 420 SQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWT 479

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI  YG HG   +A+  F +M Q+ ++PD V+F+++L ACSH+GLVD+G   FN M   
Sbjct: 480 SMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINV 539

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP-VAPDATIWGSLLCGCRIHHEVKLAE 647
             I P++EHY+C++ LL R G L EAY  ++  P ++ D  +  +L   CR+H  + L  
Sbjct: 540 YGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGV 599

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
           ++AE++ + +PD++  Y++L+N+YA   KW+EV+ +R K+   GLKKNPGCSWIEI  K+
Sbjct: 600 EIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKI 659

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
             F    +SH H + I ++L  L   M+ E
Sbjct: 660 VPFFVEDNSHYHLEGIGNILSYLTSHMEDE 689



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/428 (31%), Positives = 230/428 (53%), Gaps = 44/428 (10%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D+ TY S+L+ C  L+ +  G+ +H+ + + G+++D  V+GS LV M+  C + +   
Sbjct: 103 KPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDI-VVGSSLVGMYAKCNEFECAV 161

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           ++F+++ +  V  WN ++  Y ++G F+E+L  F  M+  G   DS T +  +   A + 
Sbjct: 162 KLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLL 221

Query: 213 NSRRVKDAHK--------------------------------LFDELSDRDVVSWNCMIS 240
           +  R ++ HK                                +F+++ ++ VV+WN MI+
Sbjct: 222 DLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMIN 281

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY   G     +++FK M + G    L T+ + L  C+    L+ G+ VH + ++     
Sbjct: 282 GYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQP 341

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           +I  N++L+D+Y KCG ++ A  +F+ M + + VSW  MI+GY  EG    A+RLF  M 
Sbjct: 342 DIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMS 401

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           +  +EPD    TS+L AC+    LE G+++H+ I E ++ ++  V  AL+DMYAKCG++ 
Sbjct: 402 KSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVE 461

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACA 469
           +A  VF  +P +D+VSW +MI           AL+LF  MLQ N +PD VT   IL AC+
Sbjct: 462 EAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACS 521

Query: 470 SLAALERG 477
               ++ G
Sbjct: 522 HAGLVDDG 529


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 273/830 (32%), Positives = 441/830 (53%), Gaps = 73/830 (8%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
            A I  + E G  +KAME L+   + + +     +++  C+ L +L  G+++HS I +  
Sbjct: 113 TAMIRAWMEHGRPDKAME-LFDRMEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRD 171

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK---VFIWNLLMHEYSKTGNFKESL 183
              ++ VLG+ L+ M+  CG L + ++ F+++       V  WN ++  + + G+ +E+L
Sbjct: 172 FE-ENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREAL 230

Query: 184 YLFKKMQSLGIAA-DSYTF-----SCVLKCLAVVGNSRRV-------------------- 217
            LF+ M   G    +S TF     SCV   L  + + R +                    
Sbjct: 231 QLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALV 290

Query: 218 ---------KDAHKLF----DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
                     DA ++F    DE     +V+ + MIS    NG  ++ L +F  M   G  
Sbjct: 291 DSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTK 350

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACF-----SKEISFNNTLLDMYSKCGDLD 319
               T+V+VL+ C+    L  G A  AF L+        +++     TLL  Y++  DL 
Sbjct: 351 PSGVTLVSVLNACS---MLQVGSAT-AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLP 406

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A   F+ +    VVSW +M A Y +      A+ LF  M+ EG+ P V    + L ACA
Sbjct: 407 RARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACA 466

Query: 380 C---DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM-PVK-DI 434
                    IGK +   ++E  ++    V+NA ++MYAKCGS+ADA +VF ++ P + D 
Sbjct: 467 AYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDC 526

Query: 435 VSWNTMIGA----------LDLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHG 482
           ++WN+M+ A           +LF AM      +P+ VT   +L A  S  ++ +GREIH 
Sbjct: 527 ITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHA 586

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA--KDLISWTIMIAGYGMHGFG 540
            ++ +G  +D  + NA+++MY KCG L  A+++FD   +  +D+I+WT +IAGY  +G  
Sbjct: 587 RVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQA 646

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
             A+  F  M+Q G+ P+ V+FIS L AC+H G +++G    + M  +  I P  +H++C
Sbjct: 647 ERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSC 706

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           +VDLL R G L EA + +E    A D   W +LL  C+   E++  E+ AE + +L+P+ 
Sbjct: 707 IVDLLGRCGRLDEAEKLLERTSQA-DVITWMALLDACKNSKELERGERCAERIMQLDPEV 765

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
              Y++LA++YA A +W E   +R+ +  +G++ +PGCS +E+  +++ F AG  SHP +
Sbjct: 766 ASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKS 825

Query: 721 KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
           ++I   L+RL   +K  GY   T   L +  +  KE  L  HSEKLA+AFG+++ P+G  
Sbjct: 826 EEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSP 885

Query: 781 IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +RV KNLRVC DCH   K +SK   R+I++RDS+R+HHF  G CSC  +W
Sbjct: 886 LRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 168/602 (27%), Positives = 275/602 (45%), Gaps = 70/602 (11%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVI-DDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           TY  +LQ C  L++L+ G+++H+ I    I + +   L S L+ M   CG+L E   + +
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           +     V+    ++  + + G   +++ LF +M+                CL  +   RR
Sbjct: 105 RF--ASVYSCTAMIRAWMEHGRPDKAMELFDRMEVRPNCHALIALVNACSCLGNLAAGRR 162

Query: 217 VK-----------------------------DAHKLFDEL---SDRDVVSWNCMISGYIA 244
           +                              DA + FD L   S RDVV+WN MIS ++ 
Sbjct: 163 IHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLR 222

Query: 245 NGVAEKGLEVFKEMLNLGF-NVDLATMVTVLSGCANCGALMFG--RAVHAFALKACFSKE 301
           NG A + L++F++M   G    +  T V+VL  C   G L     RA+H   + A   +E
Sbjct: 223 NGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIERE 282

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGER----SVVSWTSMIAGYAREGVFDGAIRLFR 357
                 L+D Y K G LD A  VF + G+     S+V+ ++MI+   + G    ++RLF 
Sbjct: 283 AFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFF 342

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ-----SSLYVSNALMDM 412
            M  EG +P    + S+L+AC+   +L++G     ++ E  M+         +   L+  
Sbjct: 343 AMNLEGTKPSGVTLVSVLNACS---MLQVGSATA-FVLEQAMEVVSATRDNVLGTTLLTT 398

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTM 461
           YA+   +  A + F+ +   D+VSWN M            AL LF  M L+   P   T 
Sbjct: 399 YARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATF 458

Query: 462 ACILPACASL---AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
              L ACA+     A   G+ I   +   G+  D  VANA ++MY KCG L  AR++F+ 
Sbjct: 459 ITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFER 518

Query: 519 I-PA-KDLISWTIMIAGYGMHGFGCDAIATFNDMR-QAGIEPDEVSFISVLYACSHSGLV 575
           I PA +D I+W  M+A YG HG G +A   F  M  +  ++P++V+F++VL A +    +
Sbjct: 519 ISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSI 578

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEMMPVAPDATIWGSLL 634
            +G R  +        E        ++++ ++ G+L +A   F +      D   W SL+
Sbjct: 579 AQG-REIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLI 637

Query: 635 CG 636
            G
Sbjct: 638 AG 639



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 143/289 (49%), Gaps = 24/289 (8%)

Query: 345 REGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYI--KENDMQS 401
           R GV D    + R +  +G   P  Y    +L AC     L+ G+ +H +I  +  D+ +
Sbjct: 21  RLGVEDLTAAVSRIIADQGHCAPSTYGC--LLQACGRLRALKQGQRLHAHILSRRIDLHN 78

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML 451
             ++++ L+ M+AKCG++A+AE++ ++     + S   MI           A++LF  M 
Sbjct: 79  HSFLASDLIVMHAKCGNLAEAEALADRF--ASVYSCTAMIRAWMEHGRPDKAMELFDRM- 135

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
               P+   +  ++ AC+ L  L  GR IH  I       +  + NA++ MY KCG L+ 
Sbjct: 136 -EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLID 194

Query: 512 ARSLFDMIP---AKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLY 567
           A+  FD +P    +D+++W  MI+ +  +G   +A+  F DM R     P+ V+F+SVL 
Sbjct: 195 AKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLD 254

Query: 568 ACSHSGLVD-EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           +C  +GL+  E  R  +       IE +      +VD   + G+L +A+
Sbjct: 255 SCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAW 303



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 14/202 (6%)

Query: 441 IGALDLFVAMLQNFEPDG----VTMACILPACASLAALERGREIHGYILRHGISADRN-- 494
           +G  DL  A+ +     G     T  C+L AC  L AL++G+ +H +IL   I    +  
Sbjct: 22  LGVEDLTAAVSRIIADQGHCAPSTYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSF 81

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           +A+ ++ M+ KCG L  A +L D   +  + S T MI  +  HG    A+  F+ M    
Sbjct: 82  LASDLIVMHAKCGNLAEAEALADRFAS--VYSCTAMIRAWMEHGRPDKAMELFDRME--- 136

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           + P+  + I+++ ACS  G +  G R  + +  + + E        ++ + S+ G+L +A
Sbjct: 137 VRPNCHALIALVNACSCLGNLAAGRRIHSQIS-DRDFEENSVLGNALISMYSKCGSLIDA 195

Query: 615 YRFIEMMPVAP--DATIWGSLL 634
            +  + +P A   D   W +++
Sbjct: 196 KQAFDRLPRASKRDVVTWNAMI 217


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/613 (38%), Positives = 358/613 (58%), Gaps = 12/613 (1%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           + +V+W  +I+      +  + L +F +M   G   +  T  ++LS  A    ++ G+ +
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H+   K  F   I     L+DMY+KC D+  A+RVF++M ER++VSW SMI G+    ++
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327

Query: 350 DGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
           D A+ +F+ ++RE  + P+  +++S+L ACA  G L  G+ VH  + +  +    YV N+
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNS 387

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPD 457
           LMDMY KC    +   +F  +  +D+V+WN ++           A + F  M  +   PD
Sbjct: 388 LMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPD 447

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
             + + +L + ASLAAL +G  IH  I++ G   +  +  +++ MY KCG LV A  +F+
Sbjct: 448 EASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFE 507

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            I   ++ISWT MI+ Y +HG     I  F  M   GIEP  V+F+ VL ACSH+G V+E
Sbjct: 508 GIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEE 567

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           G   FN M+   ++ P  EHYACMVDLL R G L EA RFIE MP+ P  ++WG+LL  C
Sbjct: 568 GLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGAC 627

Query: 638 RIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPG 697
           R +  +K+  + AE +FE+EP N G YVLLAN+   + + EE  ++R  +   G++K PG
Sbjct: 628 RKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPG 687

Query: 698 CSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEV 757
           CSWI++K    +F A   SH  + +I  +L++L   +K++GY  +T +   + +E E+E 
Sbjct: 688 CSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQ 747

Query: 758 ALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFH 817
            L  HSEKLA+AFG+L LP    IR+ KNLR CG CH + K  SK   REI++RD NRFH
Sbjct: 748 GLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFH 807

Query: 818 HFKDGRCSCRGFW 830
            F DG CSC  +W
Sbjct: 808 RFADGFCSCGDYW 820



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/533 (26%), Positives = 249/533 (46%), Gaps = 66/533 (12%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDD----GVLGSKLVFMFVTCGDLKEGRRVFNK 157
           +L      +SL+   ++H+      I+I++      L + L+ ++  CG L +   +F+ 
Sbjct: 148 LLNTAIQTRSLKHATQIHT-----QIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSI 202

Query: 158 IDN--GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-------- 207
             +    +  W  L+   S      ++L LF +M+  G   + +TFS +L          
Sbjct: 203 THHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVL 262

Query: 208 ---------------------LAVVGNSRRVKDAH---KLFDELSDRDVVSWNCMISGYI 243
                                 A+V    +  D H   ++FD++ +R++VSWN MI G+ 
Sbjct: 263 HGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFF 322

Query: 244 ANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
            N + ++ + VFK++L     + +  ++ +VLS CAN G L FGR VH   +K       
Sbjct: 323 HNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLT 382

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              N+L+DMY KC   D  +++F+ +G+R VV+W  ++ G+ +   F+ A   F  M RE
Sbjct: 383 YVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRRE 442

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           GI PD  + +++LH+ A    L  G  +HD I +     ++ +  +L+ MYAKCGS+ DA
Sbjct: 443 GILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDA 502

Query: 423 ESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNFEPDGVTMACILPACASL 471
             VF  +   +++SW  MI A          ++LF  ML +  EP  VT  C+L AC+  
Sbjct: 503 YQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHT 562

Query: 472 AALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTI 529
             +E G      + + H ++        +VD+  + G L  A+   + +P K   S W  
Sbjct: 563 GRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGA 622

Query: 530 MIAG---YGMHGFGCDAIATFNDMRQAGIEP-DEVSFISVLYACSHSGLVDEG 578
           ++     YG    G +A     +M     EP +  +++ +   C+ SG ++E 
Sbjct: 623 LLGACRKYGNLKMGREAAERLFEM-----EPYNPGNYVLLANMCTRSGRLEEA 670



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 205/381 (53%), Gaps = 19/381 (4%)

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGE--RSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           FNN L+++Y+KCG L+ A+ +F       +++V+WTS+I   +   +   A+ LF  M  
Sbjct: 180 FNN-LINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRC 238

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
            G  P+ +  +SIL A A   ++  G+ +H  I ++   ++++V  AL+DMYAKC  M  
Sbjct: 239 SGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHS 298

Query: 422 AESVFNQMPVKDIVSWNTMI----------GALDLFVAML--QNFEPDGVTMACILPACA 469
           A  VF+QMP +++VSWN+MI           A+ +F  +L  +   P+ V+++ +L ACA
Sbjct: 299 AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACA 358

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           ++  L  GR++HG ++++G+     V N+++DMY KC        LF  +  +D+++W +
Sbjct: 359 NMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNV 418

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           ++ G+  +    +A   F  MR+ GI PDE SF +VL++ +    + +G    + +  + 
Sbjct: 419 LVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQI-IKL 477

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
                +     ++ + ++ G+L +AY+  E +    +   W +++   ++H       ++
Sbjct: 478 GYVKNMCILGSLITMYAKCGSLVDAYQVFEGIE-DHNVISWTAMISAYQLHGCANQVIEL 536

Query: 650 AEHVFE--LEPDNTGYYVLLA 668
            EH+    +EP +  +  +L+
Sbjct: 537 FEHMLSEGIEPSHVTFVCVLS 557



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 177/381 (46%), Gaps = 36/381 (9%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ SIL   A    +  G+++HS+I + G   +  V G+ LV M+  C D+    RVF++
Sbjct: 247 TFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFV-GTALVDMYAKCADMHSAVRVFDQ 305

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKK-MQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           +    +  WN ++  +     +  ++ +FK  ++   +  +  + S VL   A +G    
Sbjct: 306 MPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNF 365

Query: 217 VKDAH--------------------------------KLFDELSDRDVVSWNCMISGYIA 244
            +  H                                KLF  + DRDVV+WN ++ G++ 
Sbjct: 366 GRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQ 425

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           N   E+    F  M   G   D A+  TVL   A+  AL  G A+H   +K  + K +  
Sbjct: 426 NDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCI 485

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
             +L+ MY+KCG L  A +VFE + + +V+SWT+MI+ Y   G  +  I LF  M+ EGI
Sbjct: 486 LGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGI 545

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAE 423
           EP       +L AC+  G +E G    + +K+ +DM         ++D+  + G + +A+
Sbjct: 546 EPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAK 605

Query: 424 SVFNQMPVKDIVS-WNTMIGA 443
                MP+K   S W  ++GA
Sbjct: 606 RFIESMPMKPTPSVWGALLGA 626



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 159/351 (45%), Gaps = 47/351 (13%)

Query: 90  EKSKIDTK-TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           EK+ I  + +  S+L  CA++  L  G++VH ++ + G+V    V+ S L+ M+  C   
Sbjct: 340 EKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNS-LMDMYFKCRFF 398

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL--- 205
            EG ++F  + +  V  WN+L+  + +   F+E+   F  M+  GI  D  +FS VL   
Sbjct: 399 DEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSS 458

Query: 206 ----------------------KCLAVVGN-------SRRVKDAHKLFDELSDRDVVSWN 236
                                 K + ++G+          + DA+++F+ + D +V+SW 
Sbjct: 459 ASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWT 518

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MIS Y  +G A + +E+F+ ML+ G      T V VLS C++ G +  G A H  ++K 
Sbjct: 519 AMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLA-HFNSMKK 577

Query: 297 CFSKEISFNN--TLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAGYAREGVF---- 349
                    +   ++D+  + G LD A R  E M  +   S W +++    + G      
Sbjct: 578 IHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGR 637

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
           + A RLF     E   P  Y +  + + C   G LE   +V   +  N ++
Sbjct: 638 EAAERLFE---MEPYNPGNYVL--LANMCTRSGRLEEANEVRRLMGVNGVR 683



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 6/164 (3%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  +  F +    E+A    +   +  I  D  ++ ++L   A L +L  G  +H  I 
Sbjct: 416 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 475

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G V +  +LGS L+ M+  CG L +  +VF  I++  V  W  ++  Y   G   + +
Sbjct: 476 KLGYVKNMCILGS-LITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVI 534

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL 227
            LF+ M S GI     TF CVL   +  G   RV++    F+ +
Sbjct: 535 ELFEHMLSEGIEPSHVTFVCVLSACSHTG---RVEEGLAHFNSM 575


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/655 (35%), Positives = 386/655 (58%), Gaps = 43/655 (6%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D  +GS L+ ++   G +++ RR+F+K+ N    +WN++++ + K G    ++ +F+ M+
Sbjct: 6   DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65

Query: 191 SLGIAADSYTFSCVL-----KCLAVVGNSR---------------------------RVK 218
           +     +S TF+ VL     + L+  GN                             ++ 
Sbjct: 66  NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLS 125

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           DA KLF+ + D +VV+WN MI+G++ NG  ++   +F EM++ G + D  T  + L    
Sbjct: 126 DALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVT 185

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
              +L  G+ +H + L+   + ++   + L+D+Y KC D+  A ++F++     +V  T+
Sbjct: 186 ESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTA 245

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +I+GY   G+ + A+ +FR ++ E + P+   + S+L ACA    L +GK++H  I ++ 
Sbjct: 246 IISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHG 305

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFV 448
           +    +V +A+MDMYAKCG +  A  +F +MP KD V WN +I           A+DLF 
Sbjct: 306 LDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFR 365

Query: 449 AM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            M  +    D V+++  L ACA+L AL  G+ IH ++++    ++    +A++DMY KCG
Sbjct: 366 QMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCG 425

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            L +AR +FDM+  K+ +SW  +IA YG HG    ++A F+ M + GI+PD V+F+++L 
Sbjct: 426 NLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILS 485

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           AC H+G VD+G ++F  M  E  I  ++EHYAC+VDL  R G L+EA+  I+ MP +PD 
Sbjct: 486 ACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDD 545

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            +WG+LL  CR+H  V+LAE  +  + +L+P+N+G YVLL+NV+A+A +W  V+K+R  +
Sbjct: 546 GVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLM 605

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
            +RG++K PG SWIE+    ++FVA   SHP + +I S+L  L LE+++EGY PK
Sbjct: 606 KKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCPK 660



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 253/520 (48%), Gaps = 48/520 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSE--KSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  +  F + G    A++V       ++K ++ T+ S+L +CA     E G ++H ++ 
Sbjct: 41  WNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVI 100

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             G   D  ++ + LV M+   G L +  ++FN + +  V  WN ++  + + G   E+ 
Sbjct: 101 SCGFHFDP-LVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEAS 159

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH---------------------- 221
            LF +M S G++ DS TF+  L  +    + ++ K+ H                      
Sbjct: 160 LLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIY 219

Query: 222 ----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                     K+F + ++ D+V    +ISGY+ NG+    LE+F+ +L    + +  T+ 
Sbjct: 220 FKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLA 279

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +VL  CA    L  G+ +HA  LK    +     + ++DMY+KCG LD A ++F +M E+
Sbjct: 280 SVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEK 339

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             V W ++I   ++ G    AI LFR M REG+  D  +I++ L ACA    L  GK +H
Sbjct: 340 DAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIH 399

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------- 443
            ++ +    S ++  +AL+DMY KCG+++ A  VF+ M  K+ VSWN++I A        
Sbjct: 400 SFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLE 459

Query: 444 --LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAI 499
             L LF  ML++  +PD VT   IL AC     +++G +    +   +GI A       I
Sbjct: 460 VSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACI 519

Query: 500 VDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
           VD++ + G L  A      +P + D   W  ++    +HG
Sbjct: 520 VDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHG 559



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 9/209 (4%)

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           G + D  V ++++ +Y + G +  AR LFD +P KD + W +M+ G+   G    A+  F
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
            DMR    +P+ ++F SVL  C+   L + G +   ++   C           +V + S+
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLV-ISCGFHFDPLVANALVAMYSK 120

Query: 608 TGNLSEAYRFIEMMP----VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY 663
            G LS+A +    MP    V  +  I G +  G      +  +E ++  V    PD+  +
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGV---SPDSITF 177

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGL 692
              L +V  E+   ++ K++   I R G+
Sbjct: 178 ASFLPSV-TESASLKQGKEIHGYILRHGI 205


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/761 (33%), Positives = 408/761 (53%), Gaps = 119/761 (15%)

Query: 147 DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF----- 201
           ++ +  ++F+ I+N   FI N +M  Y +  +  ++++++K M    +AAD+YT+     
Sbjct: 75  NINQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQ 134

Query: 202 SCVL-------KCL-----------------------AVVGNSRRVKDAHKLFDELSDRD 231
           SC +       KC+                       AV GN   + DA K+FD  S  D
Sbjct: 135 SCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGN---LSDARKVFDGSSVLD 191

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           +VSWN M++GY+  G  E+  +V+  M                                 
Sbjct: 192 MVSWNSMLAGYVLVGNVEEAKDVYDRMP-------------------------------- 219

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
                   + +  +N+++ ++ K G+++ A ++F +M ++ +VSW+++I+ Y +  +++ 
Sbjct: 220 -------ERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEE 272

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           A+ LF+ M   GI  D   + S+L AC+   ++  GK VH  + +  +++ + + NAL+ 
Sbjct: 273 ALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIH 332

Query: 412 MYA-------------------------------KCGSMADAESVFNQMPVKDIVSWNTM 440
           MY+                               KCG +  A ++F+ MP KD VSW+ M
Sbjct: 333 MYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAM 392

Query: 441 IG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
           I            L LF  M ++  +PD   +  ++ AC  LAAL++G+ IH YI ++G+
Sbjct: 393 ISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGL 452

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             +  +   +++MY+K G +  A  +F  +  K + +W  +I G  M+G    ++ TF++
Sbjct: 453 KINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSE 512

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M++ G+ P+E++F++VL AC H GLVDEG R FN M  E  I P ++HY CMVDLL R G
Sbjct: 513 MKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAG 572

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
            L EA   IE MP+APD + WG+LL  C+ + + +  E++   + EL PD+ G+ VLL+N
Sbjct: 573 MLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSN 632

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           +YA    W +V ++R  + + G+ K PGCS IE  G+V+ F+AG  +HP  + IE +L  
Sbjct: 633 IYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDE 692

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
           +  ++K EGY P TR   ++ DE EKE  L  HSEKLA+AFG++ +     IR+ KNLR+
Sbjct: 693 MAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRI 752

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           C DCH  AK +SK   REIV+RD +RFHHFK G CSC  +W
Sbjct: 753 CNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 236/488 (48%), Gaps = 52/488 (10%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  TY  + Q C+   +  DGK +   + + G    D  + + L+ M+  CG+L + R+V
Sbjct: 125 DNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFD-SDVYIQNTLINMYAVCGNLSDARKV 183

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+      +  WN ++  Y   GN +E+  ++ +M    + A +         + + G  
Sbjct: 184 FDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASN-------SMIVLFGKK 236

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             V++A KLF+E+  +D+VSW+ +IS Y  N + E+ L +FKEM   G  VD   +++VL
Sbjct: 237 GNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVL 296

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS--------------------- 313
           S C+    ++ G+ VH   +K      ++  N L+ MYS                     
Sbjct: 297 SACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQI 356

Query: 314 ----------KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
                     KCG+++ A  +F+ M ++  VSW++MI+GYA++  F   + LF+ M  EG
Sbjct: 357 SWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEG 416

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
            +PD   + S++ AC     L+ GK +H YI++N ++ ++ +   L++MY K G + DA 
Sbjct: 417 TKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDAL 476

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLA 472
            VF  +  K + +WN +I           +L  F  M ++   P+ +T   +L AC  + 
Sbjct: 477 EVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMG 536

Query: 473 ALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIM 530
            ++ G R  +  I  H I  +      +VD+  + G+L  A  L + +P A D+ +W  +
Sbjct: 537 LVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGAL 596

Query: 531 IAGYGMHG 538
           +     +G
Sbjct: 597 LGACKKYG 604



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 199/442 (45%), Gaps = 72/442 (16%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           N  I  +   GNL  A +V   S  S +D  ++ S+L     + ++E+ K V+  + E  
Sbjct: 165 NTLINMYAVCGNLSDARKVFDGS--SVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERN 222

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
           ++  +      ++ +F   G+++E  ++FN++    +  W+ L+  Y +   ++E+L LF
Sbjct: 223 VIASNS-----MIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILF 277

Query: 187 KKMQSLGIAADSYTFSCVL----KCLAVV----------------------------GNS 214
           K+M + GI  D      VL    + L V+                             + 
Sbjct: 278 KEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSC 337

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG----------------------- 251
             V  A KLF E    D +SWN MISGY+  G  EK                        
Sbjct: 338 EEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYA 397

Query: 252 --------LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
                   L +F+EM   G   D   +V+V+S C +  AL  G+ +HA+  K      I 
Sbjct: 398 QQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINII 457

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
              TL++MY K G ++ A+ VF+ + E+ V +W ++I G A  G+ D +++ F  M   G
Sbjct: 458 LGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHG 517

Query: 364 IEPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           + P+     ++L AC   GL++ G +  +  I+E+ +  ++     ++D+  + G + +A
Sbjct: 518 VTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEA 577

Query: 423 ESVFNQMPV-KDIVSWNTMIGA 443
           E +   MP+  D+ +W  ++GA
Sbjct: 578 EELIESMPMAPDVSTWGALLGA 599



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 136/338 (40%), Gaps = 66/338 (19%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGI-------------------VID---- 130
           +D     S+L  C+ L  +  GK VH ++ + GI                   V+     
Sbjct: 287 VDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKL 346

Query: 131 -------DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
                  D +  + ++  +V CG++++ R +F+ + +     W+ ++  Y++   F E+L
Sbjct: 347 FSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETL 406

Query: 184 YLFKKMQSLGIAADSYTFSCV------------------------LKCLAVVGNSRR--- 216
            LF++MQ  G   D      V                        LK   ++G +     
Sbjct: 407 VLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMY 466

Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                V+DA ++F  L ++ V +WN +I G   NG+ +K L+ F EM   G   +  T V
Sbjct: 467 MKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFV 526

Query: 272 TVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG- 329
            VL  C + G +  G R  ++   +      I     ++D+  + G L  A  + E M  
Sbjct: 527 AVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPM 586

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
              V +W +++    + G  +   R+ R +V   + PD
Sbjct: 587 APDVSTWGALLGACKKYGDNETGERIGRKLVE--LHPD 622



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 19/285 (6%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           A+  RF E   L + M++    E +K D     S++  C  L +L+ GK +H+ I ++G+
Sbjct: 397 AQQDRFTETLVLFQEMQI----EGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGL 452

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
            I+  +LG+ L+ M++  G +++   VF  ++   V  WN L+   +  G   +SL  F 
Sbjct: 453 KINI-ILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFS 511

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSWNCMISGY 242
           +M+  G+  +  TF  VL     +G    V + H+ F+ +        ++  + CM+   
Sbjct: 512 EMKEHGVTPNEITFVAVLGACRHMG---LVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLL 568

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
              G+ ++  E+ + M       D++T   +L  C   G    G  +    L        
Sbjct: 569 GRAGMLKEAEELIESM---PMAPDVSTWGALLGACKKYGDNETGERI-GRKLVELHPDHD 624

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT--SMIAGYAR 345
            FN  L ++Y+  G+    + V   M +  VV     SMI  + R
Sbjct: 625 GFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGR 669


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/591 (38%), Positives = 353/591 (59%), Gaps = 16/591 (2%)

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            + V   M   G   D  T   ++  C   GA+  G+ VH       +  +    N L++
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MY K   L+ A  +F+KM ER+VVSWT+MI+ Y+   + D A+RL   M R+G+ P+++ 
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
            +S+L AC  + L ++ K +H +I +  ++S ++V +AL+D+Y+K G + +A  VF +M 
Sbjct: 389 FSSVLRAC--ERLYDL-KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 445

Query: 431 VKDIVSWNTMIGA----------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGRE 479
             D V WN++I A          L L+ +M +  F  D  T+  +L AC SL+ LE GR+
Sbjct: 446 TGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQ 505

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
            H ++L+     D  + NA++DMY KCG L  A+ +F+ +  KD+ISW+ MIAG   +GF
Sbjct: 506 AHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGF 563

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
             +A+  F  M+  G +P+ ++ + VL+ACSH+GLV+EGW +F  M     I+P  EHY 
Sbjct: 564 SMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYG 623

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           CM+DLL R   L +  + I  M   PD   W +LL  CR    V LA   A+ + +L+P 
Sbjct: 624 CMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQ 683

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           +TG YVLL+N+YA +++W +V ++R  + +RG++K PGCSWIE+  +++ F+ G  SHP 
Sbjct: 684 DTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQ 743

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
             +I   L +    +   GY P T + L + +  ++E +L  HSEKLA+ FGI++ P  +
Sbjct: 744 IDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEK 803

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           TIR+ KNL++CGDCH+ AK +++  +R IV+RD  R+HHF+DG CSC  +W
Sbjct: 804 TIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 204/414 (49%), Gaps = 60/414 (14%)

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK---- 222
           +LL H Y +  +   ++++   M+  G+ ADS T+S ++KC    G  R  K  H+    
Sbjct: 256 SLLNHCYRR--DLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFS 313

Query: 223 ----------------------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                                       LFD++ +R+VVSW  MIS Y    + ++ + +
Sbjct: 314 NGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRL 373

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
              M   G   ++ T  +VL  C     L   + +H++ +K     ++   + L+D+YSK
Sbjct: 374 LAFMFRDGVMPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSK 430

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
            G+L  A++VF +M     V W S+IA +A+    D A+ L++ M R G   D   +TS+
Sbjct: 431 MGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSV 490

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L AC    LLE+G+  H ++ + D    L ++NAL+DMY KCGS+ DA+ +FN+M  KD+
Sbjct: 491 LRACTSLSLLELGRQAHVHVLKFD--QDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDV 548

Query: 435 VSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGY 483
           +SW+TMI           AL+LF +M +Q  +P+ +T+  +L AC+    +  G     Y
Sbjct: 549 ISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEG----WY 604

Query: 484 ILR-----HGISADRNVANAIVDMYVKCGVL-VLARSLFDMIPAKDLISWTIMI 531
             R     +GI   R     ++D+  +   L  + + + +M    D+++W  ++
Sbjct: 605 YFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLL 658



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 194/409 (47%), Gaps = 48/409 (11%)

Query: 74  CEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDD 131
           C   +L  AM VL S E+  +  D+ TY  +++ C    ++ +GK+VH  I  +G     
Sbjct: 261 CYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNG-YHPK 319

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
             L + L+ M+V    L+E + +F+K+    V  W  ++  YS       ++ L   M  
Sbjct: 320 TFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFR 379

Query: 192 LGIAADSYTFSCVLKC-----------------------------LAVVGNSRRVKDAHK 222
            G+  + +TFS VL+                              + V      + +A K
Sbjct: 380 DGVMPNMFTFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALK 439

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +F E+   D V WN +I+ +  +   ++ L ++K M  +GF  D +T+ +VL  C +   
Sbjct: 440 VFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSL 499

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  GR  H   LK  F +++  NN LLDMY KCG L+ A  +F +M ++ V+SW++MIAG
Sbjct: 500 LELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAG 557

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
            A+ G    A+ LF  M  +G +P+   I  +L AC+  GL+  G     Y +     ++
Sbjct: 558 LAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEG---WYYFRS---MNN 611

Query: 403 LYVSNA-------LMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           LY  +        ++D+  +   + D   + ++M  + D+V+W T++ A
Sbjct: 612 LYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDA 660



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 18/220 (8%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +N+ I  F +  + ++A+  LY S +      D  T  S+L+ C  L  LE G++ H  +
Sbjct: 452 WNSIIAAFAQHSDGDEALH-LYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHV 510

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +      D +L + L+ M+  CG L++ + +FN++    V  W+ ++   ++ G   E+
Sbjct: 511 LKFD---QDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEA 567

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-----DRDVVSWNC 237
           L LF+ M+  G   +  T   +L  L    ++  V +    F  ++     D     + C
Sbjct: 568 LNLFESMKVQGPKPNHIT---ILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGC 624

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           M+      G AEK  ++ K +  +    D+ T  T+L  C
Sbjct: 625 MLDLL---GRAEKLDDMVKLIHEMNCEPDVVTWRTLLDAC 661


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/753 (32%), Positives = 396/753 (52%), Gaps = 57/753 (7%)

Query: 80  EKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
           E A+E+     S  +K    T   +LQ C  L++L +GK++H  +   G V +  +  S 
Sbjct: 214 EDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNS- 272

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           +V M+     L+  R VF+  ++  +  WN ++  Y+  G    +  LF++M+S  I  D
Sbjct: 273 IVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPD 332

Query: 198 SYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                                             +++WN ++SG++  G  E  L   + 
Sbjct: 333 ----------------------------------IITWNSLLSGHLLQGSYENVLTNIRS 358

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           + + GF  D  ++ + L      G    G+ +H + +++    ++    +L+DMY K   
Sbjct: 359 LQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDC 418

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           L+ A  VF     +++ +W S+I+GY  +G+FD A +L   M  EGI+ D+    S++  
Sbjct: 419 LEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSG 478

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
            +  G  E    V + IK   +  ++    A++    +  +  DA   F+QM        
Sbjct: 479 YSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQE------ 532

Query: 438 NTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                         +N +P+  T++ +L ACA  + L++G EIH + ++HG   D  +A 
Sbjct: 533 --------------ENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIAT 578

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           A++DMY K G L +A  +F  I  K L  W  M+ GY ++G G +    F++M + GI P
Sbjct: 579 ALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRP 638

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           D ++F ++L  C +SGLV +GW++F+ M+ + +I P +EHY+CMVDLL + G L EA  F
Sbjct: 639 DAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDF 698

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           I  MP   DA+IWG++L  CR+H ++K+AE  A ++F LEP N+  YVL+ N+Y+  E+W
Sbjct: 699 IHAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERW 758

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
            +V++L+E ++  G+K     SWI+++  +++F   G SHP   +I   L +L  E+K+ 
Sbjct: 759 GDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKL 818

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           GY P T     N D+ EKE  L  H+EKLAM +G++ +  G  IRV KN R+C DCH  A
Sbjct: 819 GYVPDTNCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAA 878

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K++S    REI LRD  RFHHF +G CSC   W
Sbjct: 879 KYISLARNREIFLRDGGRFHHFMNGECSCNDRW 911



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 226/516 (43%), Gaps = 56/516 (10%)

Query: 230 RDVVSWNCMISGYIA-NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           R+ + WN  +  + +  G + + LEVFKE+ + G   D   +  VL  C     L  G  
Sbjct: 93  RNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGME 152

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VHA  LK  F  ++  +  L+++Y KC  +D A +VF++   +    W +++    R   
Sbjct: 153 VHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSER 212

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
           ++ A+ L R M     +     I  +L AC     L  GK +H Y+      S+  + N+
Sbjct: 213 WEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNS 272

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-------- 450
           ++ MY++   +  A +VF+     ++ SWN++I          GA DLF  M        
Sbjct: 273 IVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPD 332

Query: 451 --------------------------LQN--FEPDGVTMACILPACASLAALERGREIHG 482
                                     LQ+  F+PD  ++   L A   L     G+EIHG
Sbjct: 333 IITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHG 392

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
           YI+R  +  D  V  ++VDMY+K   L  A  +F     K++ +W  +I+GY   G   +
Sbjct: 393 YIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDN 452

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
           A      M++ GI+ D V++ S++   S SG  +E     N ++    + P +  +  M+
Sbjct: 453 AEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIK-SLGLTPNVVSWTAMI 511

Query: 603 DLLSRTGNLSEAYRFIEMMP---VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP- 658
               +  N ++A +F   M    V P++T   +LL  C     +K  E++  H F ++  
Sbjct: 512 SGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEI--HCFSMKHG 569

Query: 659 --DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
             D+      L ++Y++  K +   ++   I  + L
Sbjct: 570 FVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTL 605



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 148/278 (53%), Gaps = 14/278 (5%)

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI-RLFRGMV 360
           ++ + +++  Y + GD + A +VF     R+ + W S +  +A  G     I  +F+ + 
Sbjct: 64  VTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELH 123

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
            +G++ D  A+T +L  C     L +G +VH  + +   Q  +++S AL+++Y KC  + 
Sbjct: 124 DKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGID 183

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNF--EPDGVTMACILPAC 468
            A  VF++ P+++   WNT++           AL+L   M        DG T+  +L AC
Sbjct: 184 RANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDG-TIVKLLQAC 242

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
             L AL  G++IHGY++R G  ++ ++ N+IV MY +   L LAR++FD     +L SW 
Sbjct: 243 GKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWN 302

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
            +I+ Y ++G    A   F +M  + I+PD +++ S+L
Sbjct: 303 SIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLL 340



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 17/251 (6%)

Query: 37  IVSSKSHSSCT---INPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVL--YSSEK 91
           +VS  S S C+   +  I+   S  L     ++ A I   C+  N   A++       E 
Sbjct: 475 LVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEEN 534

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
            K ++ T  ++L+ CA    L+ G+++H    + G V DD  + + L+ M+   G LK  
Sbjct: 535 VKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFV-DDIYIATALIDMYSKGGKLKVA 593

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
             VF  I    +  WN +M  Y+  G+ +E   LF  M   GI  D+ TF+ +   L+  
Sbjct: 594 HEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTAL---LSGC 650

Query: 212 GNSRRVKDAHKLFDELS-----DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
            NS  V D  K FD +      +  +  ++CM+      G  ++ L+    M       D
Sbjct: 651 KNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQ---KAD 707

Query: 267 LATMVTVLSGC 277
            +    VL+ C
Sbjct: 708 ASIWGAVLAAC 718


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/710 (35%), Positives = 383/710 (53%), Gaps = 51/710 (7%)

Query: 165 IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLF 224
           + N L+  Y K G    +  +F       +    +T++ +L  LA   ++R + D   LF
Sbjct: 43  LLNHLLTAYGKAGRHARARRVFDATPHPNL----FTYNALLSTLA---HARLLDDMDSLF 95

Query: 225 DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA--TMVTVLSGCANCGA 282
             ++ RD VS+N +I+G+   G   + + ++  +L  G +V  +  TM  ++   +  G 
Sbjct: 96  ASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGD 155

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG----------DLDG------------ 320
              GR  H   L+  F       + L+ MY+K G          ++DG            
Sbjct: 156 RALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITG 215

Query: 321 ---------AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
                    A R+FE M +R  ++WT+M+ G+ + G+   A+  FR M  +GI  D Y  
Sbjct: 216 LLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTF 275

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            SIL AC     LE GK +H YI       +++V +AL+DMY+KC S+  AE+ F +M  
Sbjct: 276 GSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSC 335

Query: 432 KDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI 480
           K+I+SW  +I           A+ +F  M ++  +PD  T+  ++ +CA+LA+LE G + 
Sbjct: 336 KNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQF 395

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           H   L  G+     V+NA+V +Y KCG +  A  LFD +   D +SWT ++ GY   G  
Sbjct: 396 HCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRA 455

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
            + I  F  M    ++PD V+FI VL ACS +G V++G  +F+ M+ +  I P  +HY C
Sbjct: 456 KETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTC 515

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           M+DL SR+G L EA  FI+ MP+ PDA  WG+LL  CR+  ++++ +  AE++ E++P N
Sbjct: 516 MIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQN 575

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
              YVLL +++A    W +V +LR  +  R +KK PGCSWI+ K KV+IF A   SHP +
Sbjct: 576 PASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFS 635

Query: 721 KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
           K I   L+ L  +M  EGY P     L +  + +K   +  HSEKLA+AFG++ +P    
Sbjct: 636 KGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMP 695

Query: 781 IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           IR+ KNLRVC DCH   K +SK   R+I++RD+ RFH F +G CSC  FW
Sbjct: 696 IRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 208/453 (45%), Gaps = 70/453 (15%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK----TYCSILQLCADLKSLEDGKKV 118
           T +YNA I  F   G   +A+ + ++  ++    +    T  +++   + L     G++ 
Sbjct: 103 TVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQF 162

Query: 119 HSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI------------- 165
           H  I   G  ++   +GS LV M+   G + + +RVF+++D   V +             
Sbjct: 163 HCQILRLGFGVN-AFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKM 221

Query: 166 ------------------WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK- 206
                             W  ++  +++ G   ++L  F++M+  GIA D YTF  +L  
Sbjct: 222 VEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTA 281

Query: 207 CLAV-----------------------VGNS--------RRVKDAHKLFDELSDRDVVSW 235
           C A+                       VG++        R +K A   F  +S ++++SW
Sbjct: 282 CGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISW 341

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
             +I GY  NG +E+ + VF EM   G + D  T+ +V+S CAN  +L  G   H  AL 
Sbjct: 342 TALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALV 401

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
           +     I+ +N L+ +Y KCG ++ A R+F++M     VSWT+++ GYA+ G     I L
Sbjct: 402 SGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDL 461

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYA 414
           F  M+ + ++PD      +L AC+  G +E G    H   K++ +         ++D+Y+
Sbjct: 462 FEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYS 521

Query: 415 KCGSMADAESVFNQMPV-KDIVSWNTMIGALDL 446
           + G + +AE    QMP+  D + W T++ A  L
Sbjct: 522 RSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRL 554



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 144/341 (42%), Gaps = 68/341 (19%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGR 152
           ID  T+ SIL  C  L +LE GK++H+ I  +    DD V +GS LV M+  C  +K   
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIRTH--YDDNVFVGSALVDMYSKCRSIKPAE 327

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------ 206
             F ++    +  W  L+  Y + G  +E++ +F +MQ  GI  D +T   V+       
Sbjct: 328 TAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLA 387

Query: 207 ---------CLAVV-----------------GNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                    CLA+V                 G    ++DAH+LFDE+   D VSW  +++
Sbjct: 388 SLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVT 447

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY   G A++ +++F++ML      D  T + VLS C+  G          F  K C   
Sbjct: 448 GYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAG----------FVEKGC--- 494

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                      Y      D  I   +         +T MI  Y+R G    A    + M 
Sbjct: 495 ----------SYFHSMQKDHGIVPIDD-------HYTCMIDLYSRSGRLKEAEEFIKQM- 536

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
              + PD     ++L AC   G +EIG+   + + E D Q+
Sbjct: 537 --PMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQN 575



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 160/361 (44%), Gaps = 35/361 (9%)

Query: 43  HSSC-TINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TY 99
           +S C +I P   +  +       ++ A I  + + G  E+A+ V    ++  ID    T 
Sbjct: 317 YSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTL 376

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
            S++  CA+L SLE+G + H +   SG+ +    + + LV ++  CG +++  R+F+++ 
Sbjct: 377 GSVISSCANLASLEEGAQFHCLALVSGL-MHYITVSNALVTLYGKCGSIEDAHRLFDEML 435

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
                 W  L+  Y++ G  KE++ LF+KM +  +  D  TF  VL   +  G    V+ 
Sbjct: 436 FHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGF---VEK 492

Query: 220 AHKLFDELS-DRDVVS----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
               F  +  D  +V     + CMI  Y  +G  ++  E  K+M     + D     T+L
Sbjct: 493 GCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQM---PMHPDAIGWGTLL 549

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV- 333
           S C   G +  G+      L+       S+   L  M++  G+ +   ++   M +R V 
Sbjct: 550 SACRLRGDMEIGQWAAENLLEIDPQNPASY-VLLCSMHATKGNWNQVAQLRRGMRDRQVK 608

Query: 334 -------VSWTSMIAGYARE--------GVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
                  + + + +  ++ +        G+++    L   M+ EG +PDV   +S+LH  
Sbjct: 609 KEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDV---SSVLHDV 665

Query: 379 A 379
           A
Sbjct: 666 A 666



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 97/250 (38%), Gaps = 75/250 (30%)

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL----------DLFVAMLQ- 452
           ++ N L+  Y K G  A A  VF+  P  ++ ++N ++  L           LF +M Q 
Sbjct: 42  HLLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQR 101

Query: 453 ---------------------------------NFEPDGVTMACILPACASLAALERGRE 479
                                            +  P  +TM+ ++ A ++L     GR+
Sbjct: 102 DTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQ 161

Query: 480 IHGYILRHGISADRNVANAIVDMYVK-------------------------------CGV 508
            H  ILR G   +  V + +V MY K                               C +
Sbjct: 162 FHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKM 221

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +  AR LF+++  +D I+WT M+ G+  +G    A+  F  MR  GI  D+ +F S+L A
Sbjct: 222 VEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTA 281

Query: 569 CSHSGLVDEG 578
           C     +++G
Sbjct: 282 CGALSALEQG 291


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/721 (35%), Positives = 396/721 (54%), Gaps = 91/721 (12%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL----- 208
           +FN   N  VF++  ++  YS   +  + + ++++MQ  G+  D++ +  ++K       
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGI 115

Query: 209 -------------------AVVGNSRR---VKDAHKLFDELSD--RDVVSWNCMISGYI- 243
                              AV+    R   +  A K+FDE+ D  R V  WN M+SGY  
Sbjct: 116 GFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWK 175

Query: 244 --ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
             + G A+   +V  E        ++ T   +++G                         
Sbjct: 176 WESEGQAQWLFDVMPER-------NVITWTAMVTG------------------------- 203

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
                     Y+K  DL+ A R F+ M ERSVVSW +M++GYA+ G+ + A+RLF  MV 
Sbjct: 204 ----------YAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVN 253

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
            GIEPD     +++ AC+  G   +   +   + +  +Q + +V  AL+DMYAK G +  
Sbjct: 254 AGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDS 313

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAML--QNFEPDGVTMACILPACA 469
           A  +FN MP +++V+WN+MI           A++LF  M+  +   PD VTM  ++ AC 
Sbjct: 314 ARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACG 373

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            L ALE G  +  ++  + I    +  NA++ MY +CG +  A+ +F  +  +D++S+  
Sbjct: 374 HLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNT 433

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           +I+G+  HG G +AI   + M++ GIEPD V+FI VL ACSH+GL++EG + F  ++   
Sbjct: 434 LISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK--- 490

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
             +P ++HYACMVDLL R G L +A R +E MP+ P A ++GSLL   RIH +V+L E  
Sbjct: 491 --DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELA 548

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           A  +FELEPDN+G ++LL+N+YA A +W++V+++RE + + G+KK  G SW+E  GK++ 
Sbjct: 549 ANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHK 608

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F+    SH  +  I  LL  LR +M+  GY       L + +E EKE  +  HSEKLA+ 
Sbjct: 609 FIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAIC 668

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           + +L   AG  IRV KNLRVC DCH   K +SK   R I++RD+NRFH F DG CSC+ +
Sbjct: 669 YALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDY 728

Query: 830 W 830
           W
Sbjct: 729 W 729



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 166/330 (50%), Gaps = 37/330 (11%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           + +V  +    DL+  RR F+ +    V  WN ++  Y++ G  +E+L LF +M + GI 
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIE 257

Query: 196 ADSYTFSCVLK--------CLAV----VGNSRRVK--------------------DAHKL 223
            D  T+  V+         CLA       + +R++                     A KL
Sbjct: 258 PDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKL 317

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGA 282
           F+ +  R+VV+WN MI+GY  NG +   +E+FKEM+       D  TMV+V+S C + GA
Sbjct: 318 FNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGA 377

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G  V  F  +      IS +N ++ MYS+CG ++ A RVF++M  R VVS+ ++I+G
Sbjct: 378 LELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISG 437

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           +A  G    AI L   M   GIEPD      +L AC+  GLLE G+ V + IK+  +   
Sbjct: 438 FAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHY 497

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVK 432
                 ++D+  + G + DA+    +MP++
Sbjct: 498 A----CMVDLLGRVGELEDAKRTMERMPME 523



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 133/299 (44%), Gaps = 40/299 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  + + G  E+A+ +      + I  D  T+ +++  C+          +   +
Sbjct: 227 SWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTL 286

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +  I ++  V  + L+ M+   GDL   R++FN +    V  WN ++  Y++ G    +
Sbjct: 287 HQKRIQLNCFVR-TALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMA 345

Query: 183 LYLFKKM-QSLGIAADSYTFSCVLKC-----------------------LAVVGNSRRV- 217
           + LFK+M  +  +  D  T   V+                         L++ G++  + 
Sbjct: 346 IELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIF 405

Query: 218 --------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                   +DA ++F E++ RDVVS+N +ISG+ A+G   + + +   M   G   D  T
Sbjct: 406 MYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVT 465

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            + VL+ C++ G L  GR V     ++     I     ++D+  + G+L+ A R  E+M
Sbjct: 466 FIGVLTACSHAGLLEEGRKV----FESIKDPAIDHYACMVDLLGRVGELEDAKRTMERM 520


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/640 (36%), Positives = 366/640 (57%), Gaps = 25/640 (3%)

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           R  +DA +LFD + +R+VV+W  +++GY  N     GLEVF EML +G      T+   L
Sbjct: 87  RAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATL 146

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           + C     +  G+ VH +A+K       S  N+L  +Y+K G LD A+R F ++ E++V+
Sbjct: 147 NACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVI 206

Query: 335 SWTSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           +WT+MI+  A  E   +  + LF  M+ +G+ P+ + +TS++  C     L +GK V  +
Sbjct: 207 TWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAF 266

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------- 442
             +   +++L V N+ M +Y + G   +A  +F QM    I++WN MI            
Sbjct: 267 SFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKD 326

Query: 443 ----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                     AL +F  + ++  +PD  T + IL  C+++ ALE+G +IH   ++ G  +
Sbjct: 327 DLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLS 386

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D  V +A+V+MY KCG +  A   F  +P +  ++WT MI+GY  HG   +AI  F +MR
Sbjct: 387 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 446

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
            AG+ P+E++F+S+L ACS++GLV+E   +F+MM+ E  IEP ++HY CM+D+  R G +
Sbjct: 447 LAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV 506

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
            +A+ FI+     P+  IW SL+ GCR H  ++LA   A+ + EL+P     Y+LL N+Y
Sbjct: 507 EDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMY 566

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
              E+W++V ++R+ + +  +      SWI IK KV  F A   +HP A ++  LL+ L 
Sbjct: 567 ISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLL 626

Query: 732 LEMKREGYFPKTRYALINADEMEKEVA--LCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
            + K  GY P     L ++++ EK  A  L  HSE+LA+A G+L  P G T+RVTKN+ +
Sbjct: 627 EKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITM 686

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           C DCH   K  S    REI++RDS R H FKDGRCSC  F
Sbjct: 687 CRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 135/296 (45%), Gaps = 58/296 (19%)

Query: 98  TYCSILQLCADLKSLEDGKKVHS----IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           T  S++ LC     L  GK+V +    I CE+ + + +  +     ++++  G+  E  R
Sbjct: 243 TLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM-----YLYLRKGETDEAMR 297

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFK-----------ESLYLFKKMQSLGIAADSYTFS 202
           +F ++++  +  WN ++  Y++  +             ++L +F+ ++   +  D +TFS
Sbjct: 298 LFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFS 357

Query: 203 CVLK-CLA----------------------VVGNSRRV---------KDAHKLFDELSDR 230
            +L  C A                      VV NS  V         +DA+K F E+  R
Sbjct: 358 SILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTR 417

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
             V+W  MISGY  +G  ++ +++F+EM   G   +  T V++LS C+  G  +   A H
Sbjct: 418 TFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAG--LVEEAEH 475

Query: 291 AFAL---KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 342
            F +   + C    +     ++DM+ + G ++ A    ++ G E +   W+S++AG
Sbjct: 476 YFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAG 531



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 17/248 (6%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T+ SIL +C+ + +LE G+++H+   +SG  + D V+ S LV M+  CG +++  
Sbjct: 350 KPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGF-LSDVVVNSALVNMYNKCGCIQDAN 408

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           + F ++       W  ++  YS+ G  +E++ LF++M+  G+  +  TF  +L   +  G
Sbjct: 409 KAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAG 468

Query: 213 NSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
               V++A   FD +     +      + CMI  ++  G  E      K     GF  + 
Sbjct: 469 ---LVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRT---GFEPNE 522

Query: 268 ATMVTVLSGCANCG--ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           A   ++++GC + G   L F  A     LK    K I     LL+MY          RV 
Sbjct: 523 AIWSSLVAGCRSHGNMELAFYAADKLLELKP---KGIETYILLLNMYISTERWQDVARVR 579

Query: 326 EKMGERSV 333
           + M +  V
Sbjct: 580 KLMKQEDV 587


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/579 (39%), Positives = 346/579 (59%), Gaps = 17/579 (2%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T   +++ C    +L  G  VH   + +   ++      L++MY   G +D A +VF++ 
Sbjct: 76  TFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDET 135

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL----L 384
            E+++  W ++    A     +  + L+  M   GI  + +  T +L AC    L    L
Sbjct: 136 REKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPL 195

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
             GK++H +I  +  +  ++V   L+D+YA+ G ++ A SVF  MP K+IVSW+ MI   
Sbjct: 196 RKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACY 255

Query: 443 --------ALDLF-VAMLQNFE--PDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                   AL+LF + ML+  +  P+ +TM  +L ACASLAALE G+ +H Y+LR G+ +
Sbjct: 256 AKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDS 315

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
              V N ++ MY +CG +   + +FD +  +D+ISW  +I+ YGMHG G  AI  F +M 
Sbjct: 316 TLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMI 375

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
             G+ P  ++FI+VL ACSH+GLV+E    F  M  +  I P++EHYACMVD+L R   L
Sbjct: 376 NRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRL 435

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
            EA   I+ M   P  T+WGSLL  CRIH  V+LAE+ +  +FELEP N G YVLL+++Y
Sbjct: 436 DEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIY 495

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           A++  W +V+++R+++  RGL+K P CSWIE+K K+   V+    +P  +++ + L  L 
Sbjct: 496 AKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLL 555

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
            E+K +GY P+T     + DE EKE  + GHS KLA+AFG++N   G+ IR++ NLR+C 
Sbjct: 556 TEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCE 615

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   KF+SK   REI+LRD NRFH FKDG CSC  +W
Sbjct: 616 DCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 212/455 (46%), Gaps = 52/455 (11%)

Query: 51  ISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLK 110
           ++AS   T   K+ N +  I   C  GNL++A+++L          KT+  ++  C +  
Sbjct: 31  LNASGYPTKDIKSNNNDDLIQSLCRGGNLKQAVQLLCCEPNPT--KKTFELLINSCIEQN 88

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
           SL DG  VH  +  SG+   D  L +KL+ M+   G +    +VF++     +F+WN + 
Sbjct: 89  SLSDGVDVHHRLVGSGLD-QDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIF 147

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS----RRVKDAH----- 221
              +     ++ L L+ +M  +GI ++ +T++ VLK   V   S    R+ K+ H     
Sbjct: 148 RALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILR 207

Query: 222 ---------------------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                                       +F  + D+++VSW+ MI+ Y  N +  K LE+
Sbjct: 208 HGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALEL 267

Query: 255 FKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           F+ M+    +   +  TMV+VL  CA+  AL  G+ VHA+ L+      +   NTL+ MY
Sbjct: 268 FQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMY 327

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
            +CG++    RVF+ M +R V+SW S+I+ Y   G+   AI++F  M+  G+ P      
Sbjct: 328 GRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFI 387

Query: 373 SILHACACDGLLEIGKDVHD-YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
           ++L AC+  GL+E  K + +  + +  +   +     ++D+  +   + +A  +   M  
Sbjct: 388 TVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDF 447

Query: 432 KD-IVSWNTMIGALDLFV---------AMLQNFEP 456
           K     W +++G+  +           AML   EP
Sbjct: 448 KPGPTVWGSLLGSCRIHCNVELAERASAMLFELEP 482



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 171/350 (48%), Gaps = 20/350 (5%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G+LK+  ++     N     + LL++   +  +  + + +  ++   G+  D Y  + ++
Sbjct: 57  GNLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLI 116

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                +G+   V  A K+FDE  ++ +  WN +          E  L ++ +M  +G   
Sbjct: 117 NMYCDLGS---VDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPS 173

Query: 266 DLATMVTVLSGCA----NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           +  T   VL  C     +   L  G+ +HA  L+  +   +    TLLD+Y++ G +  A
Sbjct: 174 NRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYA 233

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVYAITSILHACA 379
             VF  M ++++VSW++MIA YA+  +   A+ LF+ M+ E  +  P+   + S+L ACA
Sbjct: 234 SSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACA 293

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               LE GK VH Y+    + S+L V N L+ MY +CG ++  + VF+ M  +D++SWN+
Sbjct: 294 SLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNS 353

Query: 440 MIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGR 478
           +I           A+ +F  M+ +   P  +T   +L AC+    +E  +
Sbjct: 354 LISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAK 403



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/246 (21%), Positives = 100/246 (40%), Gaps = 13/246 (5%)

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           P   T   ++ +C    +L  G ++H  ++  G+  D  +A  +++MY   G +  A  +
Sbjct: 72  PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL- 574
           FD    K +  W  +     M   G D +  +  M   GI  +  ++  VL AC  S L 
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELS 191

Query: 575 ---VDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
              + +G     +++R+    E  +     ++D+ +R G +S A      MP   +   W
Sbjct: 192 ICPLRKGKEIHAHILRH--GYEGHVHVMTTLLDVYARFGYVSYASSVFGAMP-DKNIVSW 248

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEP-DNTGYYVLLANVY---AEAEKWEEVKKLREK 686
            +++  C   +E+ +       +  LE  D     + + +V    A     E  K +   
Sbjct: 249 SAMI-ACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAY 307

Query: 687 ISRRGL 692
           + RRGL
Sbjct: 308 VLRRGL 313


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 220/542 (40%), Positives = 334/542 (61%), Gaps = 13/542 (2%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACF-SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +L  C   G +  GR VHA  + + F    +   N +++MY+KCG LD A R+F++M  +
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            +V+WT++IAG+++      A+ LF  M+R G++P+ + ++S+L A   +  L+ G  +H
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
            +  +   QSS+YV +AL+DMYA+CG M  A+  F+ MP K  VSWN +I          
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272

Query: 443 -ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            AL L   M  +NF+P   T + +  ACAS+ ALE+G+ +H ++++ G+     + N ++
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY K G +  A+ +FD +   D++SW  M+ G   HG G + +  F  M + GIEP+E+
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEI 392

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           SF+ VL ACSHSGL+DEG  +F +M+ +  +EP + HY   VDLL R G L  A RFI  
Sbjct: 393 SFLCVLTACSHSGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIRE 451

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ P A +WG+LL  CR+H  ++L    AE  FEL+P ++G  +LL+N+YA A +W +V
Sbjct: 452 MPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDV 511

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            K+R+ +   G+KK P CSW+EI+  V++FVA   +HP  K+I    + +  ++K  GY 
Sbjct: 512 AKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGYV 571

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T + L+  D+ E+E  L  HSEKLA+AF +LN P G  IR+ KN+RVCGDCH   KF+
Sbjct: 572 PDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFV 631

Query: 801 SK 802
           SK
Sbjct: 632 SK 633



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 178/333 (53%), Gaps = 12/333 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + DA ++FDE+  +D+V+W  +I+G+  N      L +F +ML LG   +  T+ ++L  
Sbjct: 139 LDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKA 198

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
             +   L  G  +HAF LK  +   +   + L+DMY++CG +D A   F+ M  +S VSW
Sbjct: 199 SGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSW 258

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++I+G+AR+G  + A+ L   M R+  +P  +  +S+  ACA  G LE GK VH ++ +
Sbjct: 259 NALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIK 318

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDL 446
           + ++   ++ N L+DMYAK GS+ DA+ VF+++   D+VSWNTM+            LD 
Sbjct: 319 SGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDR 378

Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  ML+   EP+ ++  C+L AC+    L+ G      + ++ +  D       VD+  +
Sbjct: 379 FEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGR 438

Query: 506 CGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
            G+L  A      +P +   + W  ++    MH
Sbjct: 439 VGLLDRAERFIREMPIEPTAAVWGALLGACRMH 471



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 193/383 (50%), Gaps = 35/383 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D   Y  +L+ C  L  +E G+ VH+ + +S  + +  VL + +V M+  CG L + RR+
Sbjct: 86  DYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRM 145

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-------- 206
           F+++    +  W  L+  +S+    +++L LF +M  LG+  + +T S +LK        
Sbjct: 146 FDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGL 205

Query: 207 ---------CL------------AVVGNSRRVK--DAHKL-FDELSDRDVVSWNCMISGY 242
                    CL            A+V    R    DA +L FD +  +  VSWN +ISG+
Sbjct: 206 DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGH 265

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
              G  E  L +  +M    F     T  +V S CA+ GAL  G+ VHA  +K+   K I
Sbjct: 266 ARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGL-KLI 324

Query: 303 SF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +F  NTLLDMY+K G +D A RVF+++ +  VVSW +M+ G A+ G+    +  F  M+R
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
            GIEP+  +   +L AC+  GLL+ G    + +K+  ++  +      +D+  + G +  
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDR 444

Query: 422 AESVFNQMPVKDIVS-WNTMIGA 443
           AE    +MP++   + W  ++GA
Sbjct: 445 AERFIREMPIEPTAAVWGALLGA 467



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 160/385 (41%), Gaps = 65/385 (16%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  S+L+       L+ G ++H+   + G       +GS LV M+  CG +   +  F+ 
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQ-SSVYVGSALVDMYARCGHMDAAQLAFDG 249

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV------------- 204
           +       WN L+  +++ G  + +L+L  KMQ        +T+S V             
Sbjct: 250 MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQG 309

Query: 205 -----------LKCLAVVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                      LK +A +GN+          + DA ++FD L   DVVSWN M++G   +
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
           G+ ++ L+ F++ML +G   +  + + VL+ C++ G L  G        K     ++   
Sbjct: 370 GLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHY 429

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            T +D+  + G LD A R   +M  E +   W +++          GA R+ + M     
Sbjct: 430 VTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL----------GACRMHKNM----- 474

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           E  VY         A +   E+  D HD      + S++Y S       AK   M   ES
Sbjct: 475 ELGVY---------AAERAFEL--DPHDS-GPRMLLSNIYASAGRWRDVAKVRKMMK-ES 521

Query: 425 VFNQMPVKDIVSWNTMIGALDLFVA 449
              + P     SW  +  A+ LFVA
Sbjct: 522 GVKKQPA---CSWVEIENAVHLFVA 543



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 7/200 (3%)

Query: 439 TMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVAN 497
           T + ALDL      +  PD    + +L  C  L  +E+GR +H +++  H +     + N
Sbjct: 70  TGLYALDLI--QRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQN 127

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
            IV+MY KCG L  AR +FD +P KD+++WT +IAG+  +    DA+  F  M + G++P
Sbjct: 128 IIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQP 187

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNM-MRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           +  +  S+L A      +D G +     ++Y    +  +   + +VD+ +R G++  A  
Sbjct: 188 NHFTLSSLLKASGSEHGLDPGTQLHAFCLKY--GYQSSVYVGSALVDMYARCGHMDAAQL 245

Query: 617 FIEMMPVAPDATIWGSLLCG 636
             + MP   + + W +L+ G
Sbjct: 246 AFDGMPTKSEVS-WNALISG 264


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/561 (40%), Positives = 328/561 (58%), Gaps = 46/561 (8%)

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+  G LD ++ +F +    SV  WT++I G+A  G+ + A+  +  M+ +G+EP+ +  
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
           +SIL  C     +E GK +H    +    S LYV   L+D+YA+ G +  A+ +F+ MP 
Sbjct: 79  SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134

Query: 432 KDIVS-------------------------------WNTMIG----------ALDLFVAM 450
           K +VS                               WN MI           AL LF  M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 451 LQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
           L+   +P+ VT+  +L AC  L ALE GR +H YI  +GI  + +V  A+VDMY KCG L
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             AR +FD I  KD+++W  MI GY M GF  +A+  F  M + G+ P  ++FI +L AC
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
            HSG V EGW  FN M+ E  IEPK+EHY CMV+LL R G++ +AY  ++ M + PD  +
Sbjct: 315 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 374

Query: 630 WGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISR 689
           WG+LL  CR+H ++ L EK+ E + +    N+G Y+LL+N+YA    W+ V +LR  +  
Sbjct: 375 WGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKD 434

Query: 690 RGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALIN 749
            G+KK PGCS IE+  KV+ F+AGG +HP  K+I  +L+ +   +K  GY P+T   L +
Sbjct: 435 SGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHD 494

Query: 750 ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIV 809
             E EKE +L  HSEKLA+AFG++N   G TI++ KNLRVC DCHE+ K +SK   R+IV
Sbjct: 495 IGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIV 554

Query: 810 LRDSNRFHHFKDGRCSCRGFW 830
           +RD NRFHHF +G CSC  +W
Sbjct: 555 VRDRNRFHHFVNGSCSCGDYW 575



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 176/360 (48%), Gaps = 48/360 (13%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           LF    +  V  W  +I G+   G+ E+ L  + +ML  G   +  T  ++L  C     
Sbjct: 31  LFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP---- 86

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           +  G+A+H+ A+K  F  ++     LLD+Y++ GD+  A ++F+ M E+S+VS T+M+  
Sbjct: 87  IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTC 146

Query: 343 YAREG-------VFDG------------------------AIRLFRGMVREGIEPDVYAI 371
           YA+ G       +FDG                        A+ LFR M++   +P+   +
Sbjct: 147 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 206

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            S+L AC   G LE G+ VH YI+ N +Q +++V  AL+DMY+KCGS+ DA  VF+++  
Sbjct: 207 LSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD 266

Query: 432 KDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           KD+V+WN+MI           AL LF +M +    P  +T   IL AC     +  G +I
Sbjct: 267 KDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI 326

Query: 481 HGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMHG 538
              +   +GI         +V++  + G +  A  L  +M    D + W  ++    +HG
Sbjct: 327 FNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 386



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 164/371 (44%), Gaps = 61/371 (16%)

Query: 137 KLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA 196
           KL   + + G L     +F +  N  VF W  ++H ++  G  +++L  + +M + G+  
Sbjct: 14  KLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEP 73

Query: 197 DSYTFSCVLK----------------------------CLAVVGNSRRVKDAHKLFDE-- 226
           +++TFS +LK                             L V      V  A +LFD   
Sbjct: 74  NAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133

Query: 227 -----------------------------LSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                                        + +RD V WN MI GY  NG+  + L +F+ 
Sbjct: 134 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 193

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           ML      +  T+++VLS C   GAL  GR VH++         +     L+DMYSKCG 
Sbjct: 194 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 253

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           L+ A  VF+K+ ++ VV+W SMI GYA  G    A++LF+ M R G+ P       IL A
Sbjct: 254 LEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSA 313

Query: 378 CACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIV 435
           C   G +  G D+ + +K E  ++  +     ++++  + G +  A  +   M ++ D V
Sbjct: 314 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPV 373

Query: 436 SWNTMIGALDL 446
            W T++GA  L
Sbjct: 374 LWGTLLGACRL 384



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 120/248 (48%), Gaps = 13/248 (5%)

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           K+K +  T  S+L  C  L +LE G+ VHS I  +GI  +  V G+ LV M+  CG L++
Sbjct: 198 KAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHV-GTALVDMYSKCGSLED 256

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
            R VF+KID+  V  WN ++  Y+  G  +E+L LFK M  +G+   + TF   +  L+ 
Sbjct: 257 ARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITF---IGILSA 313

Query: 211 VGNSRRVKDAHKLFDELSDR-----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
            G+S  V +   +F+++ D       +  + CM++     G  E+  E+ K   N+    
Sbjct: 314 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVK---NMNIEP 370

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D     T+L  C   G +  G  +    +    +   ++   L ++Y+  G+ DG  R+ 
Sbjct: 371 DPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTY-ILLSNIYAAVGNWDGVARLR 429

Query: 326 EKMGERSV 333
             M +  V
Sbjct: 430 TMMKDSGV 437


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/777 (32%), Positives = 404/777 (51%), Gaps = 54/777 (6%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           ++++ C  L     G +V   + +SG+     V  S L+ MF  C  ++E   VF+ +  
Sbjct: 165 TVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANS-LISMFGNCDSIEEASCVFDDMKE 223

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR----- 215
                WN ++      G+ ++SL  F +M+      D  T S +L       N R     
Sbjct: 224 RDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGL 283

Query: 216 ---------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                                      + +DA  +F ++ +RD++SWN M++ ++ NG  
Sbjct: 284 HGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNY 343

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
            + LE+  EML      +  T  T LS C N   L   + VHAF +       +   N L
Sbjct: 344 PRALELLIEMLQTRKATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNAL 400

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           + MY K G +  A RV + M +R  V+W ++I G+A     + AI  F  +  EG+  + 
Sbjct: 401 VTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNY 460

Query: 369 YAITSILHA-CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
             I ++L A  + D LL+ G  +H +I     +   +V ++L+ MYA+CG +  +  +F+
Sbjct: 461 ITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFD 520

Query: 428 QMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACASLAALER 476
            +  K+  +WN ++ A          L L + M  +    D  + +       +L  L+ 
Sbjct: 521 VLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDE 580

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP---AKDLISWTIMIAG 533
           G+++H  I++HG  ++  V NA +DMY KCG +     +F ++P   ++   SW I+I+ 
Sbjct: 581 GQQLHSLIIKHGFESNDYVLNATMDMYGKCGEI---DDVFRILPQPRSRSQRSWNILISA 637

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
              HGF   A   F++M   G+ PD V+F+S+L ACSH GLVDEG  +F+ M  +  +  
Sbjct: 638 LARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPT 697

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            +EH  C++DLL R G L+EA  FI  MPV P   +W SLL  C+IH  ++LA K A+ +
Sbjct: 698 GIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRL 757

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
           FEL+  +   YVL +NV A   +W +V+ +R+++    +KK P CSW+++K +V  F  G
Sbjct: 758 FELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMG 817

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
              HP   +I + L+ L+  ++  GY P T Y+L + DE +KE  L  HSE++A+AFG++
Sbjct: 818 DQYHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLI 877

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           N   G  +R+ KNLRVCGDCH + K +S+   R+I+LRD+ RFHHF  G+CSC  +W
Sbjct: 878 NSSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 226/483 (46%), Gaps = 48/483 (9%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+   G ++  + VF+K+       WN LM  + + G +++++  F  M   G+   SY 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 201 -------------------------FSCVLKCLAVVGNSRR--------VKDAHKLFDEL 227
                                      C L C   VG S          V +   +F E+
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
            + ++VSW  ++ GY  NG  ++ + V++ +   G   +   M TV+  C      M G 
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            V    +K+     +S  N+L+ M+  C  ++ A  VF+ M ER  +SW S+I      G
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
             + ++  F  M     + D   I+++L  C     L  G+ +H  + ++ ++S++ V N
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEPD 457
           +L+ MY++ G   DAE VF++M  +D++SWN+M+           AL+L + MLQ  +  
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360

Query: 458 G-VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
             VT    L AC +L  L   + +H +++  G+  +  + NA+V MY K G +  A+ + 
Sbjct: 361 NYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA-CSHSGLV 575
            ++P +D ++W  +I G+  +     AI  FN +R+ G+  + ++ +++L A  S   L+
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLL 477

Query: 576 DEG 578
           D G
Sbjct: 478 DHG 480



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 239/523 (45%), Gaps = 50/523 (9%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSE--KSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T ++N+ I      G+ EK++E         +K D  T  ++L +C   ++L  G+ +H 
Sbjct: 226 TISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHG 285

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           ++ +SG+  +  V  S L+ M+   G  ++   VF+K+    +  WN +M  +   GN+ 
Sbjct: 286 MVVKSGLESNVCVCNS-LLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYP 344

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCL---------------------AVVGNSR---- 215
            +L L  +M     A +  TF+  L                         ++GN+     
Sbjct: 345 RALELLIEMLQTRKATNYVTFTTALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMY 404

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                +  A ++   + DRD V+WN +I G+  N      +E F  +   G  V+  T+V
Sbjct: 405 GKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIV 464

Query: 272 TVLSGCANCGALM-FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +LS   +   L+  G  +HA  + A F  E    ++L+ MY++CGDL+ +  +F+ +  
Sbjct: 465 NLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLAN 524

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD-GLLEIGKD 389
           ++  +W ++++  A  G  + A++L   M  +GI  D ++  S+ HA   +  LL+ G+ 
Sbjct: 525 KNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSF-SVAHAIIGNLTLLDEGQQ 583

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL----- 444
           +H  I ++  +S+ YV NA MDMY KCG + D   +  Q   +   SWN +I AL     
Sbjct: 584 LHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGF 643

Query: 445 -----DLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVAN 497
                + F  ML     PD VT   +L AC+    ++ G      +  + G+        
Sbjct: 644 FQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCV 703

Query: 498 AIVDMYVKCGVLVLARSLFDM--IPAKDLISWTIMIAGYGMHG 538
            I+D+  + G L  A +  +   +P  DL+ W  ++A   +HG
Sbjct: 704 CIIDLLGRAGKLTEAENFINKMPVPPTDLV-WRSLLAACKIHG 745



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 138/289 (47%), Gaps = 47/289 (16%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MYSK G ++ A  VF+KM ER+  SW ++++G+ R G +  A++ F  M+  G+ P  Y 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 371 ITSILHACACDGLLEIGK-DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
             S++ AC   G +  G   VH ++ +  +   ++V  +L+  Y   G +A+ + VF ++
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 430 PVKDIVSWNTMI------GALDLFVAMLQNFEPDGV-----TMACILPACASLAALERGR 478
              +IVSW +++      G +   +++ +    DGV      MA ++ +C  L     G 
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           ++ G +++ G+    +VAN+++ M+  C  +  A  +FD                     
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFD--------------------- 219

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
                     DM+    E D +S+ S++ A  H+G  ++   +F+ MRY
Sbjct: 220 ----------DMK----ERDTISWNSIITASVHNGHCEKSLEYFSQMRY 254



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 137/333 (41%), Gaps = 44/333 (13%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLED----GKKVHSI 121
           +NA IG   +      A+E      +  +    Y +I+ L +   S +D    G  +H+ 
Sbjct: 428 WNALIGGHADNKEPNAAIEAFNLLREEGVPVN-YITIVNLLSAFLSPDDLLDHGMPIHAH 486

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I  +G  ++  V  S L+ M+  CGDL     +F+ + N     WN ++   +  G  +E
Sbjct: 487 IVVAGFELETFV-QSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEE 545

Query: 182 SLYLFKKMQSLGIAADSYTFSC--------------------VLK------------CLA 209
           +L L  KM++ GI  D ++FS                     ++K             + 
Sbjct: 546 ALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMD 605

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           + G    + D  ++  +   R   SWN +IS    +G  ++  E F EML+LG   D  T
Sbjct: 606 MYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVT 665

Query: 270 MVTVLSGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            V++LS C++ G +  G A   + + K      I     ++D+  + G L  A     KM
Sbjct: 666 FVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKM 725

Query: 329 G-ERSVVSWTSMIAGYAREGVFD----GAIRLF 356
               + + W S++A     G  +     A RLF
Sbjct: 726 PVPPTDLVWRSLLAACKIHGNLELARKAADRLF 758


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 222/536 (41%), Positives = 338/536 (63%), Gaps = 16/536 (2%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N L++MY K G L  A  VF+KM +R+VVSWT+MI+ Y+   + D A+     M+REG+ 
Sbjct: 4   NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P+++  +S+L AC  DGL  + + +H  I +  + S ++V +AL+D+Y++ G + +A  V
Sbjct: 64  PNMFTYSSVLRAC--DGLFNL-RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAAL 474
           F++M   D+V W+++I           AL LF  M +  F     T+  +L AC  LA L
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           E GR++H ++L++    D  + NA++DMY KCG L  A ++F  +  KD+ISW+ MIAG 
Sbjct: 181 ELGRQVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGL 238

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
             +G+  +A+  F  M+  GI+P+ V+ + VL+ACSH+GLV+EG  +F+ M+    I+P 
Sbjct: 239 AQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPG 298

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
            EHY CM+DLL R G LSEA   I  M   PDA  W +LL  CR+H  V +A   A+ + 
Sbjct: 299 REHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQIL 358

Query: 655 ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG 714
            L+P + G YVLL+N+YA  ++W +V ++R  ++ RG+KK PGCSWIE+  +++ F+ G 
Sbjct: 359 RLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGD 418

Query: 715 SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
            SHP  ++I   L +L  ++   GY P T + L + +  + + +L  HSEKLA+ FG+++
Sbjct: 419 RSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMS 478

Query: 775 LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LP GQTIR+ KNLR+CGDCH   K ++K  +R IV+RD  R+HHF+DG CSC  FW
Sbjct: 479 LPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/334 (34%), Positives = 181/334 (54%), Gaps = 18/334 (5%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + DA  +FD++ DR+VVSW  MIS Y A  + +K LE    ML  G   ++ T  +VL  
Sbjct: 16  LHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRA 75

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C     L   R +H   +K     ++   + L+D+YS+ G+L+ A+RVF++M    +V W
Sbjct: 76  C---DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVW 132

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           +S+IAG+A+    D A+RLF+ M R G       +TS+L AC    LLE+G+ VH ++ +
Sbjct: 133 SSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK 192

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
            D    L ++NAL+DMY KCGS+ DA +VF +M  KD++SW+TMI           AL L
Sbjct: 193 YD--QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKL 250

Query: 447 FVAM-LQNFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANAIVDMYV 504
           F +M +   +P+ VT+  +L AC+    +E G    H      GI   R     ++D+  
Sbjct: 251 FESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLG 310

Query: 505 KCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           + G L  A  L + +  + D ++W  ++    +H
Sbjct: 311 RAGRLSEAVDLINEMECEPDAVTWRALLNACRVH 344



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 37/339 (10%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           L+ M+V  G L + + VF+K+ +  V  W  ++  YS      ++L     M   G+  +
Sbjct: 6   LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65

Query: 198 SYTFSCVLK-------------CLAVVGNSRRV----------------KDAHKLFDELS 228
            +T+S VL+             C+  +G    V                ++A ++FDE+ 
Sbjct: 66  MFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMV 125

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
             D+V W+ +I+G+  N   ++ L +FK M   GF     T+ +VL  C     L  GR 
Sbjct: 126 TGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQ 185

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VH   LK  + +++  NN LLDMY KCG L+ A  VF +M E+ V+SW++MIAG A+ G 
Sbjct: 186 VHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGY 243

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE---NDMQSSLYV 405
              A++LF  M   GI+P+   I  +L AC+  GL+E G      +KE    D     Y 
Sbjct: 244 SKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHY- 302

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
              ++D+  + G +++A  + N+M  + D V+W  ++ A
Sbjct: 303 -GCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNA 340



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 146/271 (53%), Gaps = 24/271 (8%)

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-Q 452
           ++ N L++MY K G + DA+ VF++MP +++VSW TMI           AL+  V ML +
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
              P+  T + +L AC  L  L   R++H  I++ G+ +D  V +A++D+Y + G L  A
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +FD +   DL+ W+ +IAG+  +  G +A+  F  M++AG    + +  SVL AC+  
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 573 GLVDEGWRF-FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEMMPVAPDATIW 630
            L++ G +   ++++Y+ ++         ++D+  + G+L +A   F+ M  V  D   W
Sbjct: 178 ALLELGRQVHVHVLKYDQDLILN----NALLDMYCKCGSLEDANAVFVRM--VEKDVISW 231

Query: 631 GSLLCGCRIHHEVKLAEKVAE--HVFELEPD 659
            +++ G   +   K A K+ E   V  ++P+
Sbjct: 232 STMIAGLAQNGYSKEALKLFESMKVLGIKPN 262



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 164/334 (49%), Gaps = 41/334 (12%)

Query: 80  EKAME--VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
           +KA+E  VL   E  + +  TY S+L+ C  L +L   +++H  I + G+   D  + S 
Sbjct: 48  DKALEFLVLMLREGVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLD-SDVFVRSA 103

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           L+ ++   G+L+   RVF+++  G + +W+ ++  +++  +  E+L LFK+M+  G  A 
Sbjct: 104 LIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQ 163

Query: 198 SYTFSCVLKC---LAVVGNSRRV---------------------------KDAHKLFDEL 227
             T + VL+    LA++   R+V                           +DA+ +F  +
Sbjct: 164 QTTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRM 223

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
            ++DV+SW+ MI+G   NG +++ L++F+ M  LG   +  T+V VL  C++ G +  G 
Sbjct: 224 VEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEG- 282

Query: 288 AVHAFALKACFSKEISFNN--TLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYA 344
             +  ++K  F  +    +   ++D+  + G L  A+ +  +M  E   V+W +++    
Sbjct: 283 LYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACR 342

Query: 345 REGVFDGAIRLFRGMVR-EGIEPDVYAITSILHA 377
                D AI   + ++R +  +   Y + S ++A
Sbjct: 343 VHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYA 376


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/644 (38%), Positives = 355/644 (55%), Gaps = 63/644 (9%)

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
           SC LK L    +  R  D   LF          +N +I G   N   E  +  F  ML L
Sbjct: 82  SCSLKSLDYALSIFRCFDHPNLF---------VFNALIRGLAENSRFEGSVSHFVLMLRL 132

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               D  T+  VL   A    +  GR +H   +K     +     +L+DMY K G+L   
Sbjct: 133 SIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFG 192

Query: 322 IRVFEKMGER----SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           +++F++  +R    S++ W  +I G  + G    A  LF  M      P+  A +     
Sbjct: 193 LQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAM------PERNAGSW---- 242

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
                                        N+L++ + + G +  A  +F QMP K++VSW
Sbjct: 243 -----------------------------NSLINGFVRNGDLDRARELFVQMPEKNVVSW 273

Query: 438 NTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR 486
            TMI           AL +F  ML+    P+ +T+   L AC  + AL+ G  IH Y+  
Sbjct: 274 TTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSS 333

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
           +G   +R +  A+VDMY KCG +  A  +F     KDL++W++MI G+ +HG    A+  
Sbjct: 334 NGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQC 393

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
           F  M+ AGI PDEV F+++L ACSHSG VD+G  FF  MR + +IEP ++HY  +VDLL 
Sbjct: 394 FVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLG 453

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVL 666
           R G L EA  FI+ MP+ PD  IWG+L C CR H  +++AE  AE + +LEP + G YV 
Sbjct: 454 RAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVF 513

Query: 667 LANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESL 726
           L+NVYA   +WE+V+++R  +  RG++K+PG S+IE++G+V+ FVAG  +H  A++I   
Sbjct: 514 LSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLK 573

Query: 727 LKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKN 786
           L+ +    K+EGY P+T + L N +E EKE AL  HSEKLA+AFG+++   G TIR+ KN
Sbjct: 574 LEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKN 633

Query: 787 LRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LRVCGDCH M K+ SK +RREI+LRD  RFHHFKDG CSC  +W
Sbjct: 634 LRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 203/418 (48%), Gaps = 19/418 (4%)

Query: 37  IVSSKSHSSCTINPISASISKTLVCKTKN---YNAEIGRFCEVGNLEKAME--VLYSSEK 91
           +V+    SSC++  +  ++S        N   +NA I    E    E ++   VL     
Sbjct: 74  VVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLS 133

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
            + D  T   +L+  A L  +  G+ +H  + + G+  D  V  S LV M+V  G+L  G
Sbjct: 134 IRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVS-LVDMYVKIGELGFG 192

Query: 152 RRVFNKIDNGK----VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
            ++F++         + +WN+L++   K G+  ++  LF+ M       ++ +++ ++  
Sbjct: 193 LQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPE----RNAGSWNSLING 248

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
               G+  R   A +LF ++ +++VVSW  MI+G+  NG  EK L +F  ML  G   + 
Sbjct: 249 FVRNGDLDR---ARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPND 305

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T+V+ L  C   GAL  G  +H +     F         L+DMY+KCG++  A RVF +
Sbjct: 306 LTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVE 365

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
              + +++W+ MI G+A  G FD A++ F  M   GI PD     +IL AC+  G ++ G
Sbjct: 366 TKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQG 425

Query: 388 KDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            +  + ++ +  ++ ++     ++D+  + G + +A S    MP+  D V W  +  A
Sbjct: 426 LNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCA 483



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 141/310 (45%), Gaps = 40/310 (12%)

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------- 441
            +H  I  +++ S+  V   L+       S+  A S+F      ++  +N +I       
Sbjct: 58  QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117

Query: 442 ---GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
              G++  FV ML+ +  PD +T+  +L + A+L  +  GR +HG +++ G+  D  V  
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRV 177

Query: 498 AIVDMYVKCGVLVLARSLFDMIP----AKDLISWTIMIAGYGMHGFGCDAIATFNDM--R 551
           ++VDMYVK G L     LFD  P    A+ ++ W ++I G    G    A + F  M  R
Sbjct: 178 SLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPER 237

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN- 610
            AG      S+ S++     +G +D     F  M      E  +  +  M++  S+ G+ 
Sbjct: 238 NAG------SWNSLINGFVRNGDLDRARELFVQMP-----EKNVVSWTTMINGFSQNGDH 286

Query: 611 ---LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV----FELEPDNTGY 663
              LS  +R +E      D T+  +LL   +I   +++ E++  ++    F+L   N G 
Sbjct: 287 EKALSMFWRMLEEGVRPNDLTVVSALLACTKI-GALQVGERIHNYLSSNGFQL---NRGI 342

Query: 664 YVLLANVYAE 673
              L ++YA+
Sbjct: 343 GTALVDMYAK 352


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 293/815 (35%), Positives = 418/815 (51%), Gaps = 86/815 (10%)

Query: 96  TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLG-SKLVFMFVTCG---DLKEG 151
           TK   S L+ C   K++++ K  H  + + G+  DD V   +KLV      G    L   
Sbjct: 31  TKATPSSLKNC---KTIDELKMFHLSLTKQGL--DDDVSAITKLVARSCELGTRESLSFA 85

Query: 152 RRVF-NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
           + VF N    G  F++N L+  Y+ +G  KE++ LF +M + GI+ D YTF   L   A 
Sbjct: 86  KEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAK 145

Query: 211 V---GNSRRV----------KD-------------------AHKLFDELSDRDVVSWNCM 238
               GN  ++          KD                   A K+FDE+S+R+VVSW  M
Sbjct: 146 SRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSM 205

Query: 239 ISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           I GY     A+  +++F  M+ +     +  TMV V+S CA    L  G  V+ F   + 
Sbjct: 206 ICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSG 265

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
                   + L+DMY KC  +D A R+F++ G  ++    +M + Y R+G+   A+ +  
Sbjct: 266 IEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLN 325

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC- 416
            M+  GI PD  ++ S + +C+    +  GK  H Y+  N  +S   + NAL+DMY KC 
Sbjct: 326 LMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 385

Query: 417 ------------------------------GSMADAESVFNQMPVKDIVSWNTMIGAL-- 444
                                         G +  A   FN MP K+IVSWNT+I AL  
Sbjct: 386 RQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQ 445

Query: 445 -DLFVAMLQNFE---------PDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
            +++   ++ F           DGVTM  I  AC  L AL+  + I+ YI ++ I  D  
Sbjct: 446 ENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVR 505

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           +   +VDM+ +CG    A S+F+ +  +D+ +WT  I    M G    AI  FN+M + G
Sbjct: 506 LGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQG 565

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           ++PD V FI  L AC H GLV +G   FN M     + P+  HY CMVDLL R G L EA
Sbjct: 566 LKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEA 625

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
            + I+ MP  P+  IW SLL  CR+   V++A   AE +  L P+ TG YVLL+NVYA A
Sbjct: 626 LQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASA 685

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +W ++ K+R  +  +GL+K PG S I+I+GK + F +G  SHP  +KIE++L  L    
Sbjct: 686 GRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRA 745

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
              G+ P     L++ DE EK   L  HSEKLAMAFG+++   G TIR+ KNLRVC  CH
Sbjct: 746 SDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYCH 805

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
             AKF SK   REI+LRD+NRFH  + G+CSC  F
Sbjct: 806 SFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 8/200 (4%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY---SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  I    +    E+A+EV +   S E   +D  T  SI   C  L +L+  K ++  
Sbjct: 435 SWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYY 494

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I ++ I +D   LG+ LV MF  CGD +    +FN + N  V  W   +   +  GN + 
Sbjct: 495 IEKNRIQLD-VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVER 553

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCL---AVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
           ++ LF +M   G+  D   F   L       +V   + + ++ +    +S  D V + CM
Sbjct: 554 AIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPED-VHYGCM 612

Query: 239 ISGYIANGVAEKGLEVFKEM 258
           +      G+ E+ L++ K+M
Sbjct: 613 VDLLGRAGLLEEALQLIKDM 632


>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g01030, mitochondrial; Flags: Precursor
 gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/756 (33%), Positives = 398/756 (52%), Gaps = 57/756 (7%)

Query: 77  GNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           GN EKA+E+    + S  K    T   +LQ+C++ +   +G+++H  +   G+  +  + 
Sbjct: 68  GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMC 127

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
            S L+ M+   G L+  R+VFN + +  +  WN ++  Y+K G   +++ L  +M+  G+
Sbjct: 128 NS-LIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186

Query: 195 AADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
             D                                  +V+WN ++SGY + G+++  + V
Sbjct: 187 KPD----------------------------------IVTWNSLLSGYASKGLSKDAIAV 212

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
            K M   G     +++ ++L   A  G L  G+A+H + L+     ++    TL+DMY K
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIK 272

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
            G L  A  VF+ M  +++V+W S+++G +   +   A  L   M +EGI+PD     S+
Sbjct: 273 TGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
               A  G  E   DV   +KE  +  ++    A+    +K G+  +A  VF +M  + +
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392

Query: 435 VSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                                P+  TM+ +L     L+ L  G+E+HG+ LR  +  D  
Sbjct: 393 --------------------GPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAY 432

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           VA A+VDMY K G L  A  +F  I  K L SW  M+ GY M G G + IA F+ M +AG
Sbjct: 433 VATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAG 492

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           +EPD ++F SVL  C +SGLV EGW++F++MR    I P +EH +CMVDLL R+G L EA
Sbjct: 493 MEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEA 552

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           + FI+ M + PDATIWG+ L  C+IH +++LAE   + +  LEP N+  Y+++ N+Y+  
Sbjct: 553 WDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNL 612

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +WE+V+++R  +    ++     SWI+I   V+IF A G +HP    I   L +L  EM
Sbjct: 613 NRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEM 672

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           K+ GY P T     +  + EKE  L GH+EKLAM +G++       IRV KN  +C D H
Sbjct: 673 KKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSH 732

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +AK+MS    REIVL++  R HHF+DG+CSC   W
Sbjct: 733 TVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 178/383 (46%), Gaps = 6/383 (1%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ +  +   G  + A+ VL   + +  K  T +  S+LQ  A+   L+ GK +H  I 
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            + +  D  V  + L+ M++  G L   R VF+ +D   +  WN L+   S     K++ 
Sbjct: 253 RNQLWYDVYV-ETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAE 311

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA-HKLFDELSDRDVVSWNCMISGY 242
            L  +M+  GI  D+ T++ +    A +G   +  D   K+ ++    +VVSW  + SG 
Sbjct: 312 ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGC 371

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             NG     L+VF +M   G   + ATM T+L        L  G+ VH F L+     + 
Sbjct: 372 SKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDA 431

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
                L+DMY K GDL  AI +F  +  +S+ SW  M+ GYA  G  +  I  F  M+  
Sbjct: 432 YVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEA 491

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMAD 421
           G+EPD    TS+L  C   GL++ G    D ++    +  ++   + ++D+  + G + +
Sbjct: 492 GMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDE 551

Query: 422 AESVFNQMPVK-DIVSWNTMIGA 443
           A      M +K D   W   + +
Sbjct: 552 AWDFIQTMSLKPDATIWGAFLSS 574



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 177/380 (46%), Gaps = 52/380 (13%)

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           +  Y +C  L  A ++F++M +R  ++W  ++    R G ++ A+ LFR M   G +   
Sbjct: 30  MGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYD 89

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
             +  +L  C+       G+ +H Y+    ++S++ + N+L+ MY++ G +  +  VFN 
Sbjct: 90  STMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNS 149

Query: 429 MPVKDIVSWN------TMIGALDLFVAMLQNFE-----PDGVTMACILPACAS------- 470
           M  +++ SWN      T +G +D  + +L   E     PD VT   +L   AS       
Sbjct: 150 MKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDA 209

Query: 471 LAALER----------------------------GREIHGYILRHGISADRNVANAIVDM 502
           +A L+R                            G+ IHGYILR+ +  D  V   ++DM
Sbjct: 210 IAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDM 269

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y+K G L  AR +FDM+ AK++++W  +++G        DA A    M + GI+PD +++
Sbjct: 270 YIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW 329

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEMM 621
            S+    +  G  ++       M+ E  + P +  +  +    S+ GN   A + FI+M 
Sbjct: 330 NSLASGYATLGKPEKALDVIGKMK-EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388

Query: 622 P--VAPDATIWGSLL--CGC 637
              V P+A    +LL   GC
Sbjct: 389 EEGVGPNAATMSTLLKILGC 408



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 165/372 (44%), Gaps = 63/372 (16%)

Query: 386 IGKDVHD-YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--- 441
           +G  +H   IK     S   V +A M  Y +C S+  A  +F++MP +D ++WN ++   
Sbjct: 5   LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64

Query: 442 ---GALDLFVAMLQNFEPDGV-----TMACILPACASLAALERGREIHGYILRHGISADR 493
              G  +  V + +  +  G      TM  +L  C++      GR+IHGY+LR G+ ++ 
Sbjct: 65  LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAK------------------------------- 522
           ++ N+++ MY + G L L+R +F+ +  +                               
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184

Query: 523 ----DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD-- 576
               D+++W  +++GY   G   DAIA    M+ AG++P   S  S+L A +  G +   
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244

Query: 577 ---EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
               G+   N + Y+  +E  L      +D+  +TG L  A    +MM  A +   W SL
Sbjct: 245 KAIHGYILRNQLWYDVYVETTL------IDMYIKTGYLPYARMVFDMMD-AKNIVAWNSL 297

Query: 634 LCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           + G      +K AE +   + +  ++PD   +   LA+ YA   K E+   +  K+  +G
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS-LASGYATLGKPEKALDVIGKMKEKG 356

Query: 692 LKKNPGCSWIEI 703
           +  N   SW  I
Sbjct: 357 VAPNV-VSWTAI 367


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/616 (38%), Positives = 355/616 (57%), Gaps = 12/616 (1%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           +  R++VSW  MISG   N    + +  F  M   G         + +  CA+ G++  G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           + +H  ALK     E+   + L DMYSKCG +  A +VFE+M  +  VSWT+MI GY++ 
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G F+ A+  F+ M+ E +  D + + S L AC      + G+ VH  + +   +S ++V 
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 407 NALMDMYAKCGSMADAESVFN-QMPVKDIVSWNTMIGA----------LDLFVAML-QNF 454
           NAL DMY+K G M  A +VF      +++VS+  +I            L +FV +  Q  
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
           EP+  T + ++ ACA+ AALE+G ++H  +++     D  V++ +VDMY KCG+L  A  
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
            FD I     I+W  +++ +G HG G DAI  F  M   G++P+ ++FIS+L  CSH+GL
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           V+EG  +F  M     + P  EHY+C++DLL R G L EA  FI  MP  P+A  W S L
Sbjct: 361 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             CRIH + ++ +  AE + +LEP N+G  VLL+N+YA   +WE+V+ +R ++    +KK
Sbjct: 421 GACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK 480

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
            PG SW+++  K ++F A   SHP    I   L  L  ++K  GY P+T    ++ D+  
Sbjct: 481 LPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSM 540

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
           KE  L  HSE++A+AF ++++P G+ I V KNLRVC DCH   KF+SK   R+I++RD++
Sbjct: 541 KEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNS 600

Query: 815 RFHHFKDGRCSCRGFW 830
           RFHHF DG CSC  +W
Sbjct: 601 RFHHFTDGSCSCGDYW 616



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 190/419 (45%), Gaps = 46/419 (10%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH---- 221
           W  ++   S+   F E++  F  M+  G     + FS  ++  A +G+    K  H    
Sbjct: 9   WTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 68

Query: 222 ----------------------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
                                       K+F+E+  +D VSW  MI GY   G  E+ L 
Sbjct: 69  KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 128

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
            FK+M++    +D   + + L  C    A  FGR+VH+  +K  F  +I   N L DMYS
Sbjct: 129 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 188

Query: 314 KCGDLDGAIRVFEKMGE-RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           K GD++ A  VF    E R+VVS+T +I GY      +  + +F  + R+GIEP+ +  +
Sbjct: 189 KAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFS 248

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           S++ ACA    LE G  +H  + + +     +VS+ L+DMY KCG +  A   F+++   
Sbjct: 249 SLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDP 308

Query: 433 DIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGRE-I 480
             ++WN+++           A+ +F  M+ +  +P+ +T   +L  C+    +E G +  
Sbjct: 309 TEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYF 368

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
           +     +G+       + ++D+  + G L  A+   + +P   +   W   +    +HG
Sbjct: 369 YSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 427



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 190/384 (49%), Gaps = 42/384 (10%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
            + S ++ CA L S+E GK++H +  + GI   +  +GS L  M+  CG + +  +VF +
Sbjct: 43  AFSSAIRACASLGSIEMGKQMHCLALKFGIG-SELFVGSNLEDMYSKCGAMFDACKVFEE 101

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-KCLAV------ 210
           +       W  ++  YSK G F+E+L  FKKM    +  D +     L  C A+      
Sbjct: 102 MPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 161

Query: 211 -----------------VGNSRR--------VKDAHKLFDELSD-RDVVSWNCMISGYIA 244
                            VGN+          ++ A  +F   S+ R+VVS+ C+I GY+ 
Sbjct: 162 RSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVE 221

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
               EKGL VF E+   G   +  T  +++  CAN  AL  G  +HA  +K  F ++   
Sbjct: 222 TEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFV 281

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
           ++ L+DMY KCG L+ AI+ F+++G+ + ++W S+++ + + G+   AI++F  MV  G+
Sbjct: 282 SSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGV 341

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS----NALMDMYAKCGSMA 420
           +P+     S+L  C+  GL+E G    DY    D    +       + ++D+  + G + 
Sbjct: 342 KPNAITFISLLTGCSHAGLVEEGL---DYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLK 398

Query: 421 DAESVFNQMPVK-DIVSWNTMIGA 443
           +A+   N+MP + +   W + +GA
Sbjct: 399 EAKEFINRMPFEPNAFGWCSFLGA 422



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 128/276 (46%), Gaps = 39/276 (14%)

Query: 43  HSSCTINPISASISKTLVCKTK-NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTY 99
           +S C     +  + + + CK + ++ A I  + ++G  E+A+        E+  ID    
Sbjct: 86  YSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVL 145

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
           CS L  C  LK+ + G+ VHS + + G    D  +G+ L  M+   GD++    VF  ID
Sbjct: 146 CSTLGACGALKACKFGRSVHSSVVKLGFE-SDIFVGNALTDMYSKAGDMESASNVFG-ID 203

Query: 160 NG--KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------- 209
           +    V  +  L+  Y +T   ++ L +F +++  GI  + +TFS ++K  A        
Sbjct: 204 SECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQG 263

Query: 210 ------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                                   + G    ++ A + FDE+ D   ++WN ++S +  +
Sbjct: 264 TQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQH 323

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           G+ +  +++F+ M++ G   +  T +++L+GC++ G
Sbjct: 324 GLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 359


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/709 (34%), Positives = 383/709 (54%), Gaps = 45/709 (6%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL 223
           F +  L+   SK   F E + +   +  +G+  D +  + ++   A  G   +V    K+
Sbjct: 123 FTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACG---KVDLGRKV 179

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           FDE+ +R+VVSW  +I+GY    +A++ + +F EM+ +G   +  TMV  +S CA    L
Sbjct: 180 FDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDL 239

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G+ V     +          N LLDMY KCGD+     +F++  ++++V + ++++ Y
Sbjct: 240 ELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNY 299

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
            + G+    + +   M+++G  PD   + S + ACA  G L +GK  H Y+  N ++   
Sbjct: 300 VQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLD 359

Query: 404 YVSNALMDMYAKCG----------SMAD---------------------AESVFNQMPVK 432
            +SNA++DMY KCG          SM++                     A  +F +MP  
Sbjct: 360 NISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPES 419

Query: 433 DIVSWNTMIGAL----------DLFVAML-QNFEPDGVTMACILPACASLAALERGREIH 481
           ++VSWNTMIGA+          DL   M  Q  + D VTM  I  AC  L AL+  + I+
Sbjct: 420 NLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIY 479

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
            YI ++ I  D  +  A+VDM+ +CG  + A  +F+ +  +D+ +WT  I    + G   
Sbjct: 480 TYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAK 539

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
            AI  F++M +  ++ D+  F+++L A SH G VD+G + F  M     + P++ HY CM
Sbjct: 540 GAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCM 599

Query: 602 VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNT 661
           VDLL R G L EA+  ++ MP+ P+  IWGS L  CR H  V+ A    E + +L P+  
Sbjct: 600 VDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKV 659

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK 721
           G +VLL+N+YA A KW +V ++R ++  +G +K  G S IE+ G +  F +G  SH    
Sbjct: 660 GIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENA 719

Query: 722 KIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
           +I  +L+ +   + + GY P T   L++ DE EKE  L  HSEKLAMA+G++N   G  I
Sbjct: 720 QIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPI 779

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           RV KNLR+C DCH  AK +SK   REI +RD+NR+H FK+G CSCR FW
Sbjct: 780 RVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 232/476 (48%), Gaps = 54/476 (11%)

Query: 225 DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGAL 283
           DE +   + + N +I GY A+G+ ++ + ++  M+  +G   D  T   +LS C+   A 
Sbjct: 79  DEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAF 138

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G  VH   +K    K++   N+L+  Y+ CG +D   +VF++M ER+VVSWTS+I GY
Sbjct: 139 SEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGY 198

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
           +   +   A+ LF  MV  G+EP+   +   + ACA    LE+GK V + + E  ++S+ 
Sbjct: 199 SVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNT 258

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN 453
            V NAL+DMY KCG M     +F++   K++V +NT++            L +   MLQ 
Sbjct: 259 LVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQK 318

Query: 454 FE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV---- 508
            + PD VTM   + ACA L  L  G+  H Y+ R+G+    N++NAI+DMY+KCG     
Sbjct: 319 GQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAA 378

Query: 509 ---------------------------LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
                                      L LA  +F  +P  +L+SW  MI          
Sbjct: 379 CKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFE 438

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD-EGWRFFNMMRYECNIEPKLEHYAC 600
           +AI    +M+  GI+ D V+ + +  AC + G +D   W +  + + + +I+ +L     
Sbjct: 439 EAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLG--TA 496

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           +VD+ SR G+   A R  E M    D + W + +        VK  E  A+   EL
Sbjct: 497 LVDMFSRCGDPLNAMRVFENME-KRDVSAWTAAI-------RVKAVEGNAKGAIEL 544



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND-MQSSLYVSNALMDM 412
           +L   M+++G    V+ I  ++ AC   G  E      +  KE++  + SLY  N L+  
Sbjct: 40  QLHCNMLKKG----VFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRG 95

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLA 472
           YA  G   +A  ++                   L + ++    PD  T   +L AC+ + 
Sbjct: 96  YAASGLCKEAIFIY-------------------LHMIIVMGIVPDNFTFPFLLSACSKIM 136

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           A   G ++HG +++ G+  D  VAN+++  Y  CG + L R +FD +  ++++SWT +I 
Sbjct: 137 AFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLIN 196

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           GY +     +A+  F +M + G+EP+ V+ +  + AC+    ++ G +  N+M  E  ++
Sbjct: 197 GYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMT-ELGVK 255

Query: 593 PKLEHYACMVDLLSRTGNL 611
                   ++D+  + G++
Sbjct: 256 SNTLVVNALLDMYMKCGDM 274


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/781 (32%), Positives = 405/781 (51%), Gaps = 63/781 (8%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHS-IICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           +D+      LQ C        G+ VH  ++   G+   D    + L+ M+   G L   R
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------ 206
           R+F+++    +  +  L+  +++ G+F+ +  LF++++  G   + +  + +LK      
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176

Query: 207 ----------CLAVVGNSRR----------------VKDAHKLFDELSDRDVVSWNCMIS 240
                     C   +G+                   V DA  +F+ +  +D V W  M+S
Sbjct: 177 AAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS 236

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
            Y  N   E      +    L  +            CA  G       +H  A+K     
Sbjct: 237 CYSENDCPENAFRCAQSCSLLAIS------------CARQG-------IHGCAIKTLNDT 277

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           E      LLDMY+KCGD+  A   FE +    V+  + MI+ YA+    + A  LF  ++
Sbjct: 278 EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLM 337

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           R  + P+ Y+++S+L AC     L+ GK +H++  +   +S L+V NALMD YAKC  M 
Sbjct: 338 RSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMD 397

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFEP-DGVTMACILPACA 469
            +  +F+ +   + VSWNT++           AL +F  M     P   VT + +L ACA
Sbjct: 398 SSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACA 457

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           S A++    +IH  I +   + D  + N+++D Y KCG +  A  +F  +  +D+ISW  
Sbjct: 458 STASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNA 517

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           +I+GY +HG   DA+  F+ M ++ +E ++++F+++L  C  +GLV+ G   F+ MR + 
Sbjct: 518 IISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDH 577

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            I+P +EHY C+V LL R G L++A +FI  +P AP A +W +LL  C IH  V L    
Sbjct: 578 GIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFS 637

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           AE + E+EP +   YVLL+N+YA A   ++V  LR+ +   G++K PG SW+EIKG+++ 
Sbjct: 638 AEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHA 697

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F  G   HP  + I ++L+ L L+  REGY P     L + D+ +K   L  HSE+LA+A
Sbjct: 698 FSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALA 757

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           +G++  P G  IR+ KNLR C DCH     +SK  +REI++RD NRFHHF+DG+CSC  +
Sbjct: 758 YGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDY 817

Query: 830 W 830
           W
Sbjct: 818 W 818


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/557 (40%), Positives = 332/557 (59%), Gaps = 13/557 (2%)

Query: 287 RAVHAFALK--ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           R +HAF+++     +        +  + S C  +  A ++F ++   ++ +W +MI GYA
Sbjct: 57  RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
                  A+ L+R M    IEPD +    +L A A    +  G+ VH     N  +S ++
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQN 453
           V N L+ MYA CG    A  +F  M  +++V+WN++I           AL LF  M L+ 
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
            EPDG TM  +L ACA L AL  GR  H Y+++ G+  + +  NA++D+Y KCG +  A 
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAH 296

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
            +FD +  K ++SWT +I G  ++GFG +A+  F ++ + G+ P E++F+ VLYACSH G
Sbjct: 297 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCG 356

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
           +VDEG+ +F  M+ E  I PK+EHY CMVDLL R G + +A+ FI+ MP+ P+A +W +L
Sbjct: 357 MVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTL 416

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
           L  C IH  + L E     + +LEP ++G YVLL+N+YA  ++W +V K+R  + R G+K
Sbjct: 417 LGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVK 476

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           K PG S +E++ +++ FV G  SHP  ++I   L  +   +K EGY P     L + +E 
Sbjct: 477 KTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEEE 536

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
           EKE AL  HSEK+A+AF ++N  AG  IRV KNLRVC DCH   K +SK   REIV+RD 
Sbjct: 537 EKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVRDR 596

Query: 814 NRFHHFKDGRCSCRGFW 830
           +RFHHFKDG CSC+ +W
Sbjct: 597 SRFHHFKDGHCSCKDYW 613



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 189/363 (52%), Gaps = 35/363 (9%)

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVT-CGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           +++H+     G+ + +  +G  L+F  ++ C  +    ++F++I N  +F WN ++  Y+
Sbjct: 57  RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------------------- 215
           ++ N   +L L+++M    I  D++T+  +LK +A + + R                   
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176

Query: 216 -------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                          + AHKLF+ +++R++V+WN +I+GY  NG   + L +F+EM   G
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
              D  TMV++LS CA  GAL  GR  H + +K      +   N LLD+Y+KCG +  A 
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAH 296

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
           +VF++M E+SVVSWTS+I G A  G    A+ LF+ + R+G+ P       +L+AC+  G
Sbjct: 297 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCG 356

Query: 383 LLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTM 440
           +++ G D    +KE   +   +     ++D+  + G +  A      MP++ + V W T+
Sbjct: 357 MVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTL 416

Query: 441 IGA 443
           +GA
Sbjct: 417 LGA 419



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 174/335 (51%), Gaps = 19/335 (5%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           AH++F ++ + ++ +WN MI GY  +      LE++++M       D  T   +L   A 
Sbjct: 93  AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAK 152

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              +  G  VH+ A++  F   +   NTL+ MY+ CG  + A ++FE M ER++V+W S+
Sbjct: 153 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSV 212

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I GYA  G  + A+ LFR M   G+EPD + + S+L ACA  G L +G+  H Y+ +  +
Sbjct: 213 INGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGL 272

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVA 449
             +L+  NAL+D+YAKCGS+  A  VF++M  K +VSW ++I           AL+LF  
Sbjct: 273 DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKE 332

Query: 450 M-LQNFEPDGVTMACILPACASLAALERGREIHGYILR----HGISADRNVANAIVDMYV 504
           +  +   P  +T   +L AC+    ++ G +   Y  R    +GI         +VD+  
Sbjct: 333 LERKGLMPSEITFVGVLYACSHCGMVDEGFD---YFKRMKEEYGIVPKIEHYGCMVDLLG 389

Query: 505 KCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
           + G++  A      +P + + + W  ++    +HG
Sbjct: 390 RAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHG 424



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 160/400 (40%), Gaps = 71/400 (17%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N  I  + E  N   A+E+      S I  DT TY  +L+  A L  + +G+KVHSI 
Sbjct: 107 TWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIA 166

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +G       + + LV M+  CG  +   ++F  +    +  WN +++ Y+  G   E+
Sbjct: 167 IRNGFE-SLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEA 225

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGN---SRR----------------------- 216
           L LF++M   G+  D +T   +L   A +G     RR                       
Sbjct: 226 LTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDL 285

Query: 217 ------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 ++ AHK+FDE+ ++ VVSW  +I G   NG  ++ LE+FKE+   G      T 
Sbjct: 286 YAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITF 345

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           V VL  C++CG +  G                       D + +  +  G +   E  G 
Sbjct: 346 VGVLYACSHCGMVDEG----------------------FDYFKRMKEEYGIVPKIEHYG- 382

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
                   M+    R G+   A    + M    ++P+     ++L AC   G L +G+  
Sbjct: 383 -------CMVDLLGRAGLVKQAHEFIQNM---PMQPNAVVWRTLLGACTIHGHLALGEVA 432

Query: 391 H-DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
               ++     S  YV   L ++YA     +D   V   M
Sbjct: 433 RAQLLQLEPKHSGDYV--LLSNLYASEQRWSDVHKVRRTM 470


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/702 (34%), Positives = 396/702 (56%), Gaps = 39/702 (5%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDN-----GKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           ++LV   V   ++ + +R+ + +++        F+ N L+H Y+K G  +++  LF KM 
Sbjct: 26  TQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM- 84

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
              +  D ++++ +L   A  G+ + +K     FD +  RD VS+N  I+G+  N   ++
Sbjct: 85  ---LKRDIFSWNALLSAYAKSGSIQNLKAT---FDRMPFRDSVSYNTTIAGFSGNSCPQE 138

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            LE+FK M   GF     T+V++L+  A    L +G+ +H   +   F   +   N L D
Sbjct: 139 SLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTD 198

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MY+KCG+++ A  +F+ + ++++VSW  MI+GYA+ G  +  I L   M   G  PD   
Sbjct: 199 MYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVT 258

Query: 371 ITSILHA-CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           +++I+ A C C G ++  + V    KE D    +    A+M  YAK G   DA  +FN+M
Sbjct: 259 MSTIIAAYCQC-GRVDEARRVFSEFKEKD----IVCWTAMMVGYAKNGREEDALLLFNEM 313

Query: 430 PVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
                               +L++ EPD  T++ ++ +CA LA+L  G+ +HG  +  G+
Sbjct: 314 --------------------LLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
           + +  V++A++DMY KCG +  ARS+F+++P ++++SW  MI G   +G   DA+  F +
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M Q   +PD V+FI +L AC H   +++G  +F+ +  +  + P L+HYACMV+LL RTG
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTG 473

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
            + +A   I+ M   PD  IW +LL  C    ++  AE  A H+FEL+P     Y++L+N
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSN 533

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           +YA   +W++V  +R  +  + +KK  G SWIEI  +V+ F +   +HP ++ I   L  
Sbjct: 534 MYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNM 593

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG-QTIRVTKNLR 788
           L  +++ EG+ P T   L +  E EK  ++C HSEKLA+AFG++  P G   IR+ KN+R
Sbjct: 594 LIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIR 653

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +C DCHE  KF S+   R+I+LRDSNRFHHF  G+CSC   W
Sbjct: 654 ICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/530 (27%), Positives = 243/530 (45%), Gaps = 113/530 (21%)

Query: 79  LEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           L +++++L S  +S   ++ Y  ++  C     +   K++ S +        D  L ++L
Sbjct: 7   LRQSVDLLCS--RSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQL 64

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK------------------ 180
           + ++   G L++ + +F+K+    +F WN L+  Y+K+G+ +                  
Sbjct: 65  LHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYN 124

Query: 181 -------------ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------------ 215
                        ESL LFK+MQ  G     YT   +L   A + + R            
Sbjct: 125 TTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVR 184

Query: 216 --------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                                ++ A  LFD L+ +++VSWN MISGY  NG  EK + + 
Sbjct: 185 NFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLL 244

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
            +M   G   D  TM T+++                                    Y +C
Sbjct: 245 HQMRLSGHMPDQVTMSTIIAA-----------------------------------YCQC 269

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G +D A RVF +  E+ +V WT+M+ GYA+ G  + A+ LF  M+ E IEPD Y ++S++
Sbjct: 270 GRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVV 329

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            +CA    L  G+ VH       + ++L VS+AL+DMY+KCG + DA SVFN MP +++V
Sbjct: 330 SSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVV 389

Query: 436 SWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYI 484
           SWN MI           AL+LF  MLQ  F+PD VT   IL AC     +E+G+E    I
Sbjct: 390 SWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSI 449

Query: 485 L-RHGISADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIA 532
             +HG++   +    +V++  + G +  A +L  +M    D + W+ +++
Sbjct: 450 TNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 202/407 (49%), Gaps = 18/407 (4%)

Query: 45  SCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SI 102
           S +I  + A+  +     + +YN  I  F      ++++E+    ++   +   Y   SI
Sbjct: 102 SGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSI 161

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF-----MFVTCGDLKEGRRVFNK 157
           L   A L  L  GK++H      G +I    LG+  ++     M+  CG++++ R +F+ 
Sbjct: 162 LNASAQLSDLRYGKQIH------GSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDC 215

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +    +  WNL++  Y+K G  ++ + L  +M+  G   D  T S ++      G   RV
Sbjct: 216 LTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCG---RV 272

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
            +A ++F E  ++D+V W  M+ GY  NG  E  L +F EML      D  T+ +V+S C
Sbjct: 273 DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A   +L  G+AVH  ++ A  +  +  ++ L+DMYSKCG +D A  VF  M  R+VVSW 
Sbjct: 333 AKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWN 392

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KE 396
           +MI G A+ G    A+ LF  M+++  +PD      IL AC     +E G++  D I  +
Sbjct: 393 AMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQ 452

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIG 442
           + M  +L     ++++  + G +  A ++   M    D + W+T++ 
Sbjct: 453 HGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 68/337 (20%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D V  S ++  +  CG + E RRVF++     +  W  +M  Y+K G  +++L LF +M 
Sbjct: 255 DQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRR--------------------------------VK 218
              I  DSYT S V+   A + +                                   + 
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFID 374

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           DA  +F+ +  R+VVSWN MI G   NG  +  LE+F+ ML   F  D  T + +LS C 
Sbjct: 375 DARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACL 434

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
           +C  +  G+                + +++ + +     LD                +  
Sbjct: 435 HCNWIEQGQ---------------EYFDSITNQHGMTPTLD---------------HYAC 464

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           M+    R G  + A+ L + M     +PD    +++L  C+  G +   +    ++ E D
Sbjct: 465 MVNLLGRTGRIEQAVALIKNMAH---DPDFLIWSTLLSICSTKGDIVNAEVAARHLFELD 521

Query: 399 MQSSL-YVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
              ++ Y+   L +MYA  G   D  SV N M  K++
Sbjct: 522 PTIAVPYI--MLSNMYASMGRWKDVASVRNLMKSKNV 556


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/679 (36%), Positives = 380/679 (55%), Gaps = 46/679 (6%)

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
           D YT S +L   A+   S  +  A  +F+++   ++  WN +I GY ++    +   +F 
Sbjct: 103 DPYTASKLLTAYAISSCSCLIY-AKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFL 161

Query: 257 EMLNLGFNV-DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
            ML+      +  T   +    +    L  G  +H   +KA  S ++   N+L++ Y   
Sbjct: 162 HMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSS 221

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G  D A RVF  M  + VVSW +MI  +A  G+ D A+ LF+ M  + ++P+V  + S+L
Sbjct: 222 GAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVL 281

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            ACA    LE G+ +  YI+ N     L ++NA++DMY KCG + DA+ +FN+M  KDIV
Sbjct: 282 SACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIV 341

Query: 436 SWNTMIG-----------------------------------------ALDLF--VAMLQ 452
           SW TM+                                          AL LF  + + +
Sbjct: 342 SWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSK 401

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
           + +PD VT+ C L A A L A++ G  IH YI +H I+ + ++A +++DMY KCG L  A
Sbjct: 402 DAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKA 461

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +F  +  KD+  W+ MI    M+G G  A+  F+ M +A I+P+ V+F ++L AC+H+
Sbjct: 462 MEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHA 521

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           GLV+EG + F  M     I P+++HY C+VD+  R G L +A  FIE MP+ P A +WG+
Sbjct: 522 GLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGA 581

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           LL  C  H  V+LAE   +++ ELEP N G +VLL+N+YA+A  WE+V  LR+ +    +
Sbjct: 582 LLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDV 641

Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL-INAD 751
           KK P CS I++ G V+ F+ G +SHP ++KI S L  +  + K  GY P     L ++ +
Sbjct: 642 KKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEE 701

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           +   E +L  HSEKLA+AFG+++  + Q IR+ KN+R+CGDCH  AK +S+   R+I+LR
Sbjct: 702 DNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLR 761

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           D  RFHHF+ G+CSC  +W
Sbjct: 762 DRYRFHHFRGGKCSCLDYW 780



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 140/535 (26%), Positives = 245/535 (45%), Gaps = 84/535 (15%)

Query: 84  EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLV--FM 141
           E +   + +++++      +  C +   L   K++H+ +  +    D     SKL+  + 
Sbjct: 60  EAVKGEKGNEVESTNILEFIDQCTNTMQL---KQIHAHMLRTSRFCDP-YTASKLLTAYA 115

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYT 200
             +C  L   + VFN+I    ++ WN L+  Y+ + +  +S  +F  M  S     + +T
Sbjct: 116 ISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFT 175

Query: 201 FSCVLKC--------------------------------LAVVGNSRRVKDAHKLFDELS 228
           F  + K                                 +   G+S     AH++F  + 
Sbjct: 176 FPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMP 235

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            +DVVSWN MI+ +   G+ +K L +F+EM       ++ TMV+VLS CA    L FGR 
Sbjct: 236 GKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRW 295

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           + ++     F++ +  NN +LDMY KCG ++ A  +F KM E+ +VSWT+M+ G+A+ G 
Sbjct: 296 ICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGN 355

Query: 349 FDGAIRLFRGM--------------------------------VREGIEPDVYAITSILH 376
           +D A  +F  M                                + +  +PD   +   L 
Sbjct: 356 YDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALC 415

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
           A A  G ++ G  +H YIK++D+  + +++ +L+DMYAKCG++  A  VF+ +  KD+  
Sbjct: 416 ASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYV 475

Query: 437 WNTMIG----------ALDLFVAMLQNF-EPDGVTMACILPACASLAALERGREIHGYI- 484
           W+ MIG          ALDLF +ML+ + +P+ VT   IL AC     +  G ++   + 
Sbjct: 476 WSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQME 535

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
             +GI         +VD++ + G+L  A S  + +P     + W  ++     HG
Sbjct: 536 PLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHG 590



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 48/386 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  F   G  +KA+ +    E    K +  T  S+L  CA    LE G+ + S I
Sbjct: 241 SWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYI 300

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +G   +  +L + ++ M+V CG + + + +FNK+    +  W  ++  ++K GN+ E 
Sbjct: 301 ENNGFT-EHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDE- 358

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                                AH +FD +  +   +WN +IS Y
Sbjct: 359 -------------------------------------AHCIFDAMPHKWTAAWNALISAY 381

Query: 243 IANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
             NG     L +F EM L+     D  T++  L   A  GA+ FG  +H +  K   +  
Sbjct: 382 EQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLN 441

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
                +LLDMY+KCG+L+ A+ VF  +  + V  W++MI   A  G    A+ LF  M+ 
Sbjct: 442 CHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLE 501

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE---NDMQSSLYVSNALMDMYAKCGS 418
             I+P+    T+IL AC   GL+  G+ + + ++       Q   YV   ++D++ + G 
Sbjct: 502 AYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYV--CVVDIFGRAGL 559

Query: 419 MADAESVFNQMPVKDIVS-WNTMIGA 443
           +  A S   +MP+    + W  ++GA
Sbjct: 560 LEKAASFIEKMPIPPTAAVWGALLGA 585



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 12/204 (5%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVH 119
           T  +NA I  + + G    A+ + +    S+ +K D  T    L   A L +++ G  +H
Sbjct: 371 TAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIH 430

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
             I +  I ++   L + L+ M+  CG+L +   VF+ ++   V++W+ ++   +  G  
Sbjct: 431 VYIKKHDINLNCH-LATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQG 489

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-----RDVVS 234
           K +L LF  M    I  ++ TF+ +   L    ++  V +  +LF+++         +  
Sbjct: 490 KAALDLFSSMLEAYIKPNAVTFTNI---LCACNHAGLVNEGEQLFEQMEPLYGIVPQIQH 546

Query: 235 WNCMISGYIANGVAEKGLEVFKEM 258
           + C++  +   G+ EK     ++M
Sbjct: 547 YVCVVDIFGRAGLLEKAASFIEKM 570


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/575 (40%), Positives = 333/575 (57%), Gaps = 50/575 (8%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMG----ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           + L+  ++  GD +GA  + E+M     E +V++W  +++G  R G    A+     M  
Sbjct: 90  SALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHG 149

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           EG  PD   ++  L A    G + +G+ +H Y+ +   +    V+ AL+DMY KCG   +
Sbjct: 150 EGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADE 209

Query: 422 AESVFNQMPVKDI-----------------------------------VSWNTMIG---- 442
              VF++    D+                                   VSW +++     
Sbjct: 210 IVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQ 269

Query: 443 ------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 A+DLF  M  +  EP+ VT+ C+LPA A++AAL  GR  H + LR G   D  V
Sbjct: 270 NGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYV 329

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            +A+VDMY KCG +  AR +F+ +P ++++SW  MI GY MHG   +A+  F  M+ +  
Sbjct: 330 GSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKE 389

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           +PD V+F  VL ACS +G  +EG  +FN M+++  I P++EHYACMV LL R G L +AY
Sbjct: 390 KPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAY 449

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
             I  MP  PD  IWGSLL  CR+H  V LAE  AE++F+LEP+N G YVLL+N+YA  +
Sbjct: 450 DIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKK 509

Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
            W+ V +LR+ +   GLKK  GCSWIEIK KV++ +AG SSHP    I   LK L +EM+
Sbjct: 510 MWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMR 569

Query: 736 REGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHE 795
           R G+ P T Y L + +E EK+  L  HSEKLA+A G+++   G  ++V KNLR+CGDCHE
Sbjct: 570 RLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHE 629

Query: 796 MAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             KF+S   RREI +RD+NRFHHFKDG+CSC  +W
Sbjct: 630 AMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 193/459 (42%), Gaps = 82/459 (17%)

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
           V  D  + S L+  ++  G   + R V + + +  V  W+ L+  ++  G+ + +  L +
Sbjct: 51  VSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLE 110

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +M+S G+                                  + +V++WN ++SG   +G 
Sbjct: 111 RMRSDGV----------------------------------EPNVITWNGLVSGLNRSGR 136

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
           A   +     M   GF  D   +   LS   + G +  G  +H + +KA    +      
Sbjct: 137 ARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATA 196

Query: 308 LLDMYSKCGDLDGAIRVFEKMG-----------------------------------ERS 332
           L+DMY KCG  D  +RVF++                                     E +
Sbjct: 197 LIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELN 256

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           VVSWTS++A   + G    A+ LFR M  EGIEP+   I  +L A A    L  G+  H 
Sbjct: 257 VVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHC 316

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           +         +YV +AL+DMYAKCG + DA  +F  MP +++VSWN MIG          
Sbjct: 317 FSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAEN 376

Query: 443 ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIV 500
           A+ LF +M  + E PD VT  C+L AC+     E GR     +  +HGIS        +V
Sbjct: 377 AVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMV 436

Query: 501 DMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
            +  + G L  A  + + +P   D   W  ++    +HG
Sbjct: 437 TLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHG 475



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 167/349 (47%), Gaps = 49/349 (14%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           L    D+  +  G+++H  + ++G  +D   + + L+ M+  CG   E  RVF++  +  
Sbjct: 163 LSAVGDVGDVAVGEQLHGYVVKAGCRLD-ACVATALIDMYGKCGRADEIVRVFDESSHMD 221

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           V   N L+   S+     E+L LF++    GI                            
Sbjct: 222 VASCNALVAGLSRNAQVSEALRLFREFVGRGI---------------------------- 253

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
                 + +VVSW  +++  + NG   + +++F+EM + G   +  T+  VL   AN  A
Sbjct: 254 ------ELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAA 307

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           LM GR+ H F+L+  F  +I   + L+DMY+KCG +  A  +FE M  R+VVSW +MI G
Sbjct: 308 LMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGG 367

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           YA  G  + A+RLFR M     +PD+   T +L AC+  G  E G+        N+MQ  
Sbjct: 368 YAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYF-----NEMQHK 422

Query: 403 LYVSNALMDMYA-------KCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
             +S   M+ YA       + G + DA  + NQMP + D   W +++G+
Sbjct: 423 HGIS-PRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGS 470



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 129/327 (39%), Gaps = 83/327 (25%)

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------------------- 442
           +V+++L+  Y + G+ ADA SV + MP + +V W+ +I                      
Sbjct: 56  FVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSD 115

Query: 443 ---------------------ALDLFVAML----QNFEPDGVTMACILPACASLAALERG 477
                                A D  +A++    + F PD   ++C L A   +  +  G
Sbjct: 116 GVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVG 175

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
            ++HGY+++ G   D  VA A++DMY KCG       +FD     D+ S   ++AG   +
Sbjct: 176 EQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRN 235

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
               +A+  F +    GIE + VS+ S++  C  +G   E    F  M+ E  IEP    
Sbjct: 236 AQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSE-GIEPNSVT 294

Query: 598 YAC-----------------------------------MVDLLSRTGNLSEAYRFIEMMP 622
             C                                   +VD+ ++ G + +A    E MP
Sbjct: 295 IPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMP 354

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKV 649
              +   W +++ G  +H E + A ++
Sbjct: 355 YR-NVVSWNAMIGGYAMHGEAENAVRL 380



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 13/193 (6%)

Query: 71  GRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           GR  E  +L + M+    SE  + ++ T   +L   A++ +L  G+  H      G    
Sbjct: 271 GRDLEAVDLFREMQ----SEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGF-HH 325

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D  +GS LV M+  CG +++ R +F  +    V  WN ++  Y+  G  + ++ LF+ MQ
Sbjct: 326 DIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQ 385

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIAN 245
           S     D  TF+CVL   +  G +   ++    F+E+  +  +S     + CM++     
Sbjct: 386 SSKEKPDLVTFTCVLGACSQAGWT---EEGRSYFNEMQHKHGISPRMEHYACMVTLLGRA 442

Query: 246 GVAEKGLEVFKEM 258
           G  +   ++  +M
Sbjct: 443 GKLDDAYDIINQM 455



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 48/86 (55%)

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           G+S D  VA++++  Y++ G    ARS+ D +P + ++ W+ +IA +  HG    A    
Sbjct: 50  GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSG 573
             MR  G+EP+ +++  ++   + SG
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSG 135


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/702 (34%), Positives = 396/702 (56%), Gaps = 39/702 (5%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDN-----GKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           ++LV   V   ++ + +R+ + +++        F+ N L+H Y+K G  +++  LF KM 
Sbjct: 26  TQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM- 84

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
              +  D ++++ +L   A  G+ + +K     FD +  RD VS+N  I+G+  N   ++
Sbjct: 85  ---LKRDXFSWNALLSAYAKSGSIQNLKAT---FDRMPFRDSVSYNTTIAGFSGNSCPQE 138

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            LE+FK M   GF     T+V++L+  A    L +G+ +H   +   F   +   N L D
Sbjct: 139 SLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTD 198

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MY+KCG+++ A  +F+ + ++++VSW  MI+GYA+ G  +  I L   M   G  PD   
Sbjct: 199 MYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVT 258

Query: 371 ITSILHA-CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           +++I+ A C C G ++  + V    KE D    +    A+M  YAK G   DA  +FN+M
Sbjct: 259 MSTIIAAYCQC-GRVDEARRVFSEFKEKD----IVCWTAMMVGYAKNGREEDALLLFNEM 313

Query: 430 PVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
                               +L++ EPD  T++ ++ +CA LA+L  G+ +HG  +  G+
Sbjct: 314 --------------------LLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
           + +  V++A++DMY KCG +  ARS+F+++P ++++SW  MI G   +G   DA+  F +
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M Q   +PD V+FI +L AC H   +++G  +F+ +  +  + P L+HYACMV+LL RTG
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTG 473

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
            + +A   I+ M   PD  IW +LL  C    ++  AE  A H+FEL+P     Y++L+N
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSN 533

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           +YA   +W++V  +R  +  + +KK  G SWIEI  +V+ F +   +HP ++ I   L  
Sbjct: 534 MYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNM 593

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG-QTIRVTKNLR 788
           L  +++ EG+ P T   L +  E EK  ++C HSEKLA+AFG++  P G   IR+ KN+R
Sbjct: 594 LIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIR 653

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +C DCHE  KF S+   R+I+LRDSNRFHHF  G+CSC   W
Sbjct: 654 ICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 148/530 (27%), Positives = 242/530 (45%), Gaps = 113/530 (21%)

Query: 79  LEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           L +++++L S  +S   ++ Y  ++  C     +   K++ S +        D  L ++L
Sbjct: 7   LRQSVDLLCS--RSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQL 64

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK------------------ 180
           + ++   G L++ + +F+K+     F WN L+  Y+K+G+ +                  
Sbjct: 65  LHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYN 124

Query: 181 -------------ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------------ 215
                        ESL LFK+MQ  G     YT   +L   A + + R            
Sbjct: 125 TTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVR 184

Query: 216 --------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                                ++ A  LFD L+ +++VSWN MISGY  NG  EK + + 
Sbjct: 185 NFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLL 244

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
            +M   G   D  TM T+++                                    Y +C
Sbjct: 245 HQMRLSGHMPDQVTMSTIIAA-----------------------------------YCQC 269

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G +D A RVF +  E+ +V WT+M+ GYA+ G  + A+ LF  M+ E IEPD Y ++S++
Sbjct: 270 GRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVV 329

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            +CA    L  G+ VH       + ++L VS+AL+DMY+KCG + DA SVFN MP +++V
Sbjct: 330 SSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVV 389

Query: 436 SWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYI 484
           SWN MI           AL+LF  MLQ  F+PD VT   IL AC     +E+G+E    I
Sbjct: 390 SWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSI 449

Query: 485 L-RHGISADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIA 532
             +HG++   +    +V++  + G +  A +L  +M    D + W+ +++
Sbjct: 450 SNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 202/407 (49%), Gaps = 18/407 (4%)

Query: 45  SCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SI 102
           S +I  + A+  +     + +YN  I  F      ++++E+    ++   +   Y   SI
Sbjct: 102 SGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSI 161

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF-----MFVTCGDLKEGRRVFNK 157
           L   A L  L  GK++H      G +I    LG+  ++     M+  CG++++ R +F+ 
Sbjct: 162 LNASAQLLDLRYGKQIH------GSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDC 215

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +    +  WNL++  Y+K G  ++ + L  +M+  G   D  T S ++      G   RV
Sbjct: 216 LTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCG---RV 272

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
            +A ++F E  ++D+V W  M+ GY  NG  E  L +F EML      D  T+ +V+S C
Sbjct: 273 DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A   +L  G+AVH  ++ A  +  +  ++ L+DMYSKCG +D A  VF  M  R+VVSW 
Sbjct: 333 AKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWN 392

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KE 396
           +MI G A+ G    A+ LF  M+++  +PD      IL AC     +E G++  D I  +
Sbjct: 393 AMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQ 452

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIG 442
           + M  +L     ++++  + G +  A ++   M    D + W+T++ 
Sbjct: 453 HGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 137/339 (40%), Gaps = 68/339 (20%)

Query: 129 IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
           + D V  S ++  +  CG + E RRVF++     +  W  +M  Y+K G  +++L LF +
Sbjct: 253 MPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNE 312

Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRR-------------------------------- 216
           M    I  DSYT S V+   A + +                                   
Sbjct: 313 MLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGF 372

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + DA  +F+ +  R+VVSWN MI G   NG  +  LE+F+ ML   F  D  T + +LS 
Sbjct: 373 IDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSA 432

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C +C  +  G+                + +++ + +     LD                +
Sbjct: 433 CLHCNWIEQGQ---------------EYFDSISNQHGMTPTLD---------------HY 462

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
             M+    R G  + A+ L + M     +PD    +++L  C+  G +   +    ++ E
Sbjct: 463 ACMVNLLGRTGRIEQAVALIKNMAH---DPDFLIWSTLLSICSTKGDIVNAEVAARHLFE 519

Query: 397 NDMQSSL-YVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
            D   ++ Y+   L +MYA  G   D  SV N M  K++
Sbjct: 520 LDPTIAVPYI--MLSNMYASMGRWKDVASVRNLMKSKNV 556


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/775 (33%), Positives = 408/775 (52%), Gaps = 83/775 (10%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y + ++ C  L +    K +H  I  + +   +  L + +V  +         RRVF+ I
Sbjct: 6   YSAQIKQCIGLGASRHVKMIHGNIIRT-LPHPETFLHNNIVHAYALIRSSIYARRVFDGI 64

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
               +F WN L+  YSK+G+  E                                     
Sbjct: 65  PQPNLFSWNNLLLAYSKSGHLSE------------------------------------- 87

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGC 277
              + F++L DRD V+WN +I GY  +G+    ++ +  M+ +   N+   T++T+L   
Sbjct: 88  -MERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLS 146

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK----------------------- 314
           ++ G +  G+ +H   +K  F   +   + LLDMYSK                       
Sbjct: 147 SSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYN 206

Query: 315 --------CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
                   CG ++ A+++F  M E+  VSW++MI G A+ G+   AI  FR M  EG++ 
Sbjct: 207 TLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKM 265

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D Y   S+L AC   G +  G+ +H  I   ++Q  +YV +AL+DMY KC  +  A++VF
Sbjct: 266 DQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVF 325

Query: 427 NQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALE 475
           ++M  K++VSW  M+           A+ +F+ M ++  +PD  T+   + ACA++++LE
Sbjct: 326 DRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLE 385

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
            G + HG  +  G+     V+N++V +Y KCG +  +  LF+ +  +D +SWT M++ Y 
Sbjct: 386 EGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYA 445

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
             G   +AI  F+ M Q G++PD V+   V+ ACS +GLV++G R+F +M  E  I P  
Sbjct: 446 QFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSN 505

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
            HY+CM+DL SR+G + EA  FI  MP  PDA  W +LL  CR    +++ +  AE + E
Sbjct: 506 GHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 565

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           L+P +   Y LL+++YA   KW+ V +LR  +  + ++K PG SWI+ KGK++ F A   
Sbjct: 566 LDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDE 625

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
           S P++ +I + L+ L  ++   GY P T +   + +E  K   L  HSE+LA+AFG++ +
Sbjct: 626 SSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFV 685

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           P+G  IRV KNLRVC DCH   K +S    REI++RD+ RFH FKDG CSC  FW
Sbjct: 686 PSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 740



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 224/470 (47%), Gaps = 53/470 (11%)

Query: 76  VGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLG 135
           VG   KA   +     S +   T  ++L+L +    +  GK++H  + + G      ++G
Sbjct: 116 VGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE-SYLLVG 174

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           S L+ M+   G + + ++VF  +D+    ++N LM      G  +++L LF+ M+     
Sbjct: 175 SPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGME----- 229

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                                             +D VSW+ MI G   NG+ ++ +E F
Sbjct: 230 ----------------------------------KDSVSWSAMIKGLAQNGMEKEAIECF 255

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
           +EM   G  +D     +VL  C   GA+  GR +HA  ++      I   + L+DMY KC
Sbjct: 256 REMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKC 315

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
             L  A  VF++M +++VVSWT+M+ GY + G    A+++F  M R GI+PD Y +   +
Sbjct: 316 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAI 375

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            ACA    LE G   H       +   + VSN+L+ +Y KCG + D+  +FN+M V+D V
Sbjct: 376 SACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEV 435

Query: 436 SWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG-REIHGY 483
           SW  M+           A+ LF  M+Q   +PDGVT+  ++ AC+    +E+G R     
Sbjct: 436 SWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELM 495

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIA 532
           I  +GI       + ++D++ + G +  A    + +P + D I WT +++
Sbjct: 496 INEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLS 545



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 164/405 (40%), Gaps = 88/405 (21%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E  K+D   + S+L  C  L ++ DG+++H+ I  + +  D   +GS L+ M+  C  L 
Sbjct: 261 EGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQ-DHIYVGSALIDMYCKCKCLH 319

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
             + VF+++    V  W  ++  Y +TG   E++ +F  MQ  GI  D YT    +   A
Sbjct: 320 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACA 379

Query: 210 VV--------------------------------GNSRRVKDAHKLFDELSDRDVVSWNC 237
            +                                G    + D+ +LF+E++ RD VSW  
Sbjct: 380 NISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTA 439

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+S Y   G A + +++F +M+ LG   D  T+  V+S C+  G +  G+          
Sbjct: 440 MVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQ---------- 489

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVS----WTSMIAGYAREGVFDGA 352
                                    R FE M  E  +V     ++ MI  ++R G  + A
Sbjct: 490 -------------------------RYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEA 524

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND--------MQSSLY 404
           +    GM      PD    T++L AC   G LEIGK   + + E D        + SS+Y
Sbjct: 525 MGFINGMP---FRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIY 581

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVA 449
            S    D  A+       ++V  + P +  + W    G L  F A
Sbjct: 582 ASKGKWDCVAQLRRGMKEKNVRKE-PGQSWIKWK---GKLHSFSA 622



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 149/341 (43%), Gaps = 38/341 (11%)

Query: 62  KTKN---YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGK 116
           K KN   + A +  + + G   +A+++    ++S ID   Y     +  CA++ SLE+G 
Sbjct: 329 KQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGS 388

Query: 117 KVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
           + H     +G+ I    + + LV ++  CGD+ +  R+FN+++      W  ++  Y++ 
Sbjct: 389 QFHGKAITAGL-IHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQF 447

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD-ELSDRDVVSW 235
           G   E++ LF KM  LG+  D  T + V+   +  G    V+   + F+  +++  +V  
Sbjct: 448 GRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAG---LVEKGQRYFELMINEYGIVPS 504

Query: 236 N----CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           N    CMI  +  +G  E+ +     M    F  D     T+LS C N G L  G+   A
Sbjct: 505 NGHYSCMIDLFSRSGRIEEAMGFINGM---PFRPDAIGWTTLLSACRNKGNLEIGKWA-A 560

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV--------VSWTSMIAGY 343
            +L        +    L  +Y+  G  D   ++   M E++V        + W   +  +
Sbjct: 561 ESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSF 620

Query: 344 A--------REGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
           +         + ++     L++ ++  G +PD    TS +H
Sbjct: 621 SADDESSPYSDQIYAKLEELYQKIIDNGYKPD----TSFVH 657


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/514 (41%), Positives = 328/514 (63%), Gaps = 12/514 (2%)

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M  R + SWTS+IAGYA+  + D A+ L  GM+R   +P+ +   S+L A        IG
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA---- 443
           + +H    + D    +YV +AL+DMYA+CG M  A +VF+Q+  K+ VSWN +I      
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 444 ------LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                 L +F  M +N FE    T + +  A A + ALE+G+ +H ++++ G      V 
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           N I+DMY K G ++ AR +FD +  KDL++W  M+  +  +G G +A+  F +MR+ G+ 
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
            ++++F+S+L ACSH GLV EG ++F+MM+ E N+EP+++HY  +VDLL R G L++A  
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYFDMMK-EHNLEPEIDHYVTVVDLLGRAGLLNDALV 299

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
           FI  MP+ P A +WG+LL  CR+H   K+ +  A+HVFEL+PD+TG  VLL N+YA   +
Sbjct: 300 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQ 359

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           W+   ++R+ +   G+KK P CSW+EI+  V++FVA   +HP +++I    + + +++++
Sbjct: 360 WDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRK 419

Query: 737 EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
            GY P T Y L++ DE E++  L  HSEK+A+AF ++N+P G TIR+ KN+R+CGDCH  
Sbjct: 420 AGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSA 479

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +++SK   REIV+RD+NRFHHF  G CSC  +W
Sbjct: 480 FRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 186/373 (49%), Gaps = 15/373 (4%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           +S RD+ SW  +I+GY  N + ++ L +   ML   F  +  T  ++L       +   G
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
             +HA  +K  +  ++   + LLDMY++CG +D AI VF+++  ++ VSW ++IAG+AR+
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G  +  + +F  M R G E   +  +S+  A A  G LE GK VH ++ ++  + S +V 
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNFEP------- 456
           N ++DMYAK GSM DA  VF+ +  KD+V+WN+M+ A     L    + +FE        
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240

Query: 457 -DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
            + +T   IL AC+    ++ G++    +  H +  + +    +VD+  + G+L  A   
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVF 300

Query: 516 FDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC-SHSG 573
              +P K   + W  ++    MH      I  F       ++PD+     +LY   + +G
Sbjct: 301 IFKMPMKPTAAVWGALLGSCRMHKNA--KIGQFAADHVFELDPDDTGPPVLLYNIYASTG 358

Query: 574 LVDEGWRFFNMMR 586
             D   R   MM+
Sbjct: 359 QWDAAARVRKMMK 371



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 131/248 (52%), Gaps = 4/248 (1%)

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
           D Y  S +L   A  G   R+  A  +FD+L  ++ VSWN +I+G+   G  E  L +F 
Sbjct: 75  DVYVGSALLDMYARCG---RMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFA 131

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
           EM   GF     T  +V S  A  GAL  G+ VHA  +K+         NT+LDMY+K G
Sbjct: 132 EMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSG 191

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
            +  A +VF+ + ++ +V+W SM+  +A+ G+   A+  F  M + G+  +     SIL 
Sbjct: 192 SMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILT 251

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
           AC+  GL++ GK   D +KE++++  +     ++D+  + G + DA     +MP+K   +
Sbjct: 252 ACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAA 311

Query: 437 -WNTMIGA 443
            W  ++G+
Sbjct: 312 VWGALLGS 319



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 129/277 (46%), Gaps = 34/277 (12%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ S+L+      S   G+++H++  +     DD  +GS L+ M+  CG +     VF++
Sbjct: 43  TFASLLKAAGASASSGIGEQIHALTVKYDWH-DDVYVGSALLDMYARCGRMDMAIAVFDQ 101

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +++     WN L+  +++ G+ + +L +F +MQ  G  A  +T+S V   +A +G   + 
Sbjct: 102 LESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG 161

Query: 218 K--------------------------------DAHKLFDELSDRDVVSWNCMISGYIAN 245
           K                                DA K+FD +  +D+V+WN M++ +   
Sbjct: 162 KWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQY 221

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
           G+  + +  F+EM   G +++  T +++L+ C++ G +  G+       +     EI   
Sbjct: 222 GLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHY 281

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIA 341
            T++D+  + G L+ A+    KM  +   + W +++ 
Sbjct: 282 VTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLG 318


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/571 (41%), Positives = 345/571 (60%), Gaps = 15/571 (2%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  CA  GA+M  +A H   ++     +++  N L++ YSKCG ++ A +VF+ M ERS
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA--CDGLLEIGKDV 390
           +VSW +MI  Y R  +   A+ +F  M  EG +   + I+S+L AC   CD L    K +
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALE--CKKL 184

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H    +  +  +LYV  AL+D+YAKCG + DA  VF  M  K  V+W++M+         
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244

Query: 443 --ALDLFV-AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL L+  A   + E +  T++ ++ AC++LAAL  G+++H  I + G  ++  VA++ 
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY KCG L  +  +F  +  K+L  W  +I+G+  H    + +  F  M+Q G+ P+E
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+F S+L  C H+GLV+EG RFF +MR    + P + HY+CMVD+L R G LSEAY  I+
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            +P  P A+IWGSLL  CR++  ++LAE  AE +FELEP+N G +VLL+N+YA  ++WEE
Sbjct: 425 SIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEE 484

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           + K R+ +    +KK  G SWI+IK KV+ F  G S HP  ++I S L  L ++ ++ GY
Sbjct: 485 IAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGY 544

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P   + L + +  +KE  L  HSEKLA+ FG++ LP    +R+ KNLR+C DCHE  K 
Sbjct: 545 KPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKA 604

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            S   RR I++RD NRFHHF DG CSC  FW
Sbjct: 605 ASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/425 (23%), Positives = 203/425 (47%), Gaps = 51/425 (12%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCS----------ILQLCADLKSLEDGKKVH 119
           + R     +L + + VL S ++ ++    Y +          ILQLCA   ++ + K  H
Sbjct: 25  LPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACH 84

Query: 120 SIICESGIVID---DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
             I    I ID   D  L + L+  +  CG ++  R+VF+ +    +  WN ++  Y++ 
Sbjct: 85  GKI----IRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRN 140

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLK---------------CLAV---------VG 212
               E+L +F +M++ G     +T S VL                CL+V         VG
Sbjct: 141 RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVG 200

Query: 213 NSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
            +          +KDA ++F+ + D+  V+W+ M++GY+ N   E+ L +++    +   
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            +  T+ +V+  C+N  AL+ G+ +HA   K+ F   +   ++ +DMY+KCG L  +  +
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F ++ E+++  W ++I+G+A+       + LF  M ++G+ P+    +S+L  C   GL+
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380

Query: 385 EIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIG 442
           E G+     ++    +  ++   + ++D+  + G +++A  +   +P     S W +++ 
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440

Query: 443 ALDLF 447
           +  ++
Sbjct: 441 SCRVY 445


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/737 (33%), Positives = 383/737 (51%), Gaps = 44/737 (5%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           +V  +V   +L   R +F  + +     W +++  YS+    KE+  L+ +M   G+  D
Sbjct: 83  MVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPD 142

Query: 198 SYTFSCVLKCLAVVGNSRRVKDAH--------------------------------KLFD 225
             TF+ +L         + V   H                                +LF 
Sbjct: 143 HITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFS 202

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
           E+  +D VS+N MI+GY   G  E+ L++F +M N+ F     T   +L        ++F
Sbjct: 203 EMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIF 262

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ +H  A+K  +  +I   N LLD YSK   +D A  +F++M E   VS+  +I GYA 
Sbjct: 263 GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAW 322

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G ++ +  LF+ +     +   +   ++L   A +  L +G+  H         S + V
Sbjct: 323 NGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQV 382

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNF 454
            NAL+DMYAKC    DA  +F  +  ++ V W  +I           AL +F  M  +N 
Sbjct: 383 GNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENV 442

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
             D  T A  L A A+LA++  G+++H  ++R G+ +     + +VDMY  CG +  A  
Sbjct: 443 HGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIE 502

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +F  +P ++++ W  +I+ Y  +G      ++F DM ++G+ PD VSF+SVL ACSH GL
Sbjct: 503 VFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGL 562

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           V++   +FN M     ++P+ +HYA M+D+L R+G  +EA   I  MP  PD  +W S+L
Sbjct: 563 VEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVL 622

Query: 635 CGCRIHHEVKLAEKVAEHVFELEP-DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
             CRIH    LA+K A+ +F+++   +   YV ++N+YAEA KWE   K+++ +  RG+K
Sbjct: 623 NSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVK 682

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           K    SW+EI  +V++F A   +HP  ++I   +  L   M +EGY P T   L N DE 
Sbjct: 683 KVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEE 742

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
            K  +L  HSE+LA+AF ++N P G  I + KNLR C DCH   K +SK   REI +RDS
Sbjct: 743 MKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDS 802

Query: 814 NRFHHFKDGRCSCRGFW 830
           +RFHHF+DG CSC  +W
Sbjct: 803 SRFHHFRDGSCSCGDYW 819



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 134/272 (49%), Gaps = 11/272 (4%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N ++  Y K  +L  A  +FE M  R+ VSWT MI GY++      A  L+  M R G++
Sbjct: 81  NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           PD     ++L        L+    +H +I      +SL V N+L+D Y K   +  A  +
Sbjct: 141 PDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQL 200

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAAL 474
           F++MP KD VS+N MI           AL LF+ M   +F+P G T A +L        +
Sbjct: 201 FSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDV 260

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
             G++IHG  ++     D  VANA++D Y K   + LA++LFD +P  D +S+ I+I GY
Sbjct: 261 IFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGY 320

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             +G    +   F  ++    +     F ++L
Sbjct: 321 AWNGQYEKSFDLFKRLQGTSFDRKNFPFATML 352



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 166/401 (41%), Gaps = 72/401 (17%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSII 122
           +YN  I  +   G  EK+ ++    + +  D K +   ++L + A   +L  G++ H+  
Sbjct: 312 SYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQA 371

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +  V +  V G+ LV M+  C   ++  R+F  +       W  ++  Y + G  +E+
Sbjct: 372 VVTTAVSEVQV-GNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEA 430

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA--------------------------------V 210
           L +FK+M    +  D  TF+  LK  A                                +
Sbjct: 431 LKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDM 490

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
             N   +KDA ++F E+ DR++V WN +IS Y  NG AE     F +M+  G   D  + 
Sbjct: 491 YANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSF 550

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           ++VL+ C++ G +                K + + N++  +Y              K+  
Sbjct: 551 LSVLTACSHRGLV---------------EKALWYFNSMTQVY--------------KLDP 581

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R    + +MI    R G F+ A  L   M     EPD    +S+L++C      ++ K  
Sbjct: 582 RR-KHYATMIDVLCRSGRFNEAENLISEM---PFEPDEVMWSSVLNSCRIHKNQDLAKKA 637

Query: 391 HDYIKENDM--QSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            D + + D    ++ YV+  + ++YA+ G   +A  V   M
Sbjct: 638 ADQLFKMDALRDAAAYVN--MSNIYAEAGKWENAAKVKKAM 676



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 137/328 (41%), Gaps = 34/328 (10%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           + A I  + + G  E+A+++     +  +  D  T+ S L+  A+L S+  GK++HS + 
Sbjct: 414 WTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVI 473

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             G+ +     GS LV M+  CG +K+   VF ++ +  +  WN L+  YS+ G+ + + 
Sbjct: 474 RLGL-LSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATF 532

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-----DRDVVSWNCM 238
             F  M   G+  DS +F  VL   +  G    V+ A   F+ ++     D     +  M
Sbjct: 533 SSFADMIESGLYPDSVSFLSVLTACSHRG---LVEKALWYFNSMTQVYKLDPRRKHYATM 589

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA--NCGALMFGRAVHAFALKA 296
           I     +G   +   +  EM    F  D     +VL+ C       L    A   F + A
Sbjct: 590 IDVLCRSGRFNEAENLISEM---PFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDA 646

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV--VSWTSMIAGYAREGVFDGAIR 354
                   N  + ++Y++ G  + A +V + M ER V  V+  S +    R  VF    R
Sbjct: 647 LRDAAAYVN--MSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDR 704

Query: 355 --------------LFRGMVREGIEPDV 368
                         L   M +EG +PD 
Sbjct: 705 THPQTEQIRRKINSLVELMDKEGYKPDT 732


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/630 (38%), Positives = 359/630 (56%), Gaps = 55/630 (8%)

Query: 251 GLEVFKEMLNLGFNVD---LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
           G    +E + L + ++    +  +T+L  C    AL  G+ VHA  +K   S  +  +N 
Sbjct: 100 GQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISNR 158

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           LLDMY+KCG L  A +VF++M  R + SW  MI+GY + G F+ A  LF  M       D
Sbjct: 159 LLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----D 214

Query: 368 VYAITSILHACACDGL------------------------------------LEIGKDVH 391
            ++ T+I+  C                                         L +GK +H
Sbjct: 215 NFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIH 274

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
            +I    + S   V  +L+DMY KCGS+ +A  +F++M  +D+VSW TMI          
Sbjct: 275 GHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRRE 334

Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
               LF  ++  N  P+  T A +L ACA LAA + G++IH Y++R G  +  + A+A+V
Sbjct: 335 EGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALV 394

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
            MY KCG +  A+S+F+++P  DL SWT ++ GY  HG    A+  F  + ++G +PD +
Sbjct: 395 HMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGI 454

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +FI VL AC+H+GLVD+G  +F+ ++ +  +   ++HYAC++DLL+R G  +EA   I  
Sbjct: 455 AFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINE 514

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ PD  IW +LL GCRIH  ++LA++ A+ +FE+EP+N   YV LAN+YA A    E 
Sbjct: 515 MPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEE 574

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
             +RE +  RG+ K PG SWIEI+ +V++F  G +SHP +K+I   L  L   MK  GY 
Sbjct: 575 ANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYV 634

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T + L + +  +KE  L  HSEKLA+AFGI++ P+G  I+V KNLR C DCH   KF+
Sbjct: 635 PDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFI 694

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           S    R+I++RDSNRFH F+ G CSC+ +W
Sbjct: 695 SNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 245/494 (49%), Gaps = 58/494 (11%)

Query: 60  VCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVH 119
           +C +K +   I   C    L +A+++LY  EK       Y ++L+ C   ++L++GK+VH
Sbjct: 85  LCDSKLFKEAIDILCGQSRLREAVQLLYRIEKPY--ASIYLTLLKFCLKQRALKEGKQVH 142

Query: 120 SIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
           + I  SG +   G+ + ++L+ M+  CG L +  +VF+++ +  +  WN+++  Y K GN
Sbjct: 143 AHIKTSGSI---GLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGN 199

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
           F+++  LF KM                                       +RD  SW  +
Sbjct: 200 FEKARNLFDKM--------------------------------------PNRDNFSWTAI 221

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFN-VDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           ISG + +   E+ LE+++ M    ++  +  T+ + L+  A   +L  G+ +H   ++  
Sbjct: 222 ISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMG 281

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
              +     +LLDMY KCG ++ A  +F+KM ER VVSWT+MI  Y + G  +    LFR
Sbjct: 282 LDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFR 341

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            ++   I P+ +    +L+ACA     ++GK +H Y+      S    ++AL+ MY+KCG
Sbjct: 342 HLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCG 401

Query: 418 SMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILP 466
            + +A+SVF  +P  D+ SW +++           AL  F  +L++  +PDG+    +L 
Sbjct: 402 DIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLS 461

Query: 467 ACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DL 524
           ACA    +++G E  H    +HG++   +    I+D+  + G    A S+ + +P K D 
Sbjct: 462 ACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDK 521

Query: 525 ISWTIMIAGYGMHG 538
             W  ++ G  +HG
Sbjct: 522 YIWAALLGGCRIHG 535



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 159/393 (40%), Gaps = 74/393 (18%)

Query: 80  EKAMEVLYSSEKSKIDTKTYCSILQLCAD---LKSLEDGKKVHSIICESGIVIDDGVLGS 136
           E+A+E+    +K        C+I    A    + SL  GKK+H  I   G+  D+ V+  
Sbjct: 232 EEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDE-VVWC 290

Query: 137 KLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA 196
            L+ M+  CG ++E R +F+K++   V  W  ++H Y K G  +E   LF+ + +  I  
Sbjct: 291 SLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMP 350

Query: 197 DSYTFSCVLKCLA--------------------------------VVGNSRRVKDAHKLF 224
           + +TF+ VL   A                                +      +++A  +F
Sbjct: 351 NDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVF 410

Query: 225 DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALM 284
           + L   D+ SW  ++ GY  +G  +K L  F+ +L  G   D    + VLS CA+ G + 
Sbjct: 411 EILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVD 470

Query: 285 FG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
            G    H+   K   ++ I     ++D+ ++ G    A  +  +M               
Sbjct: 471 KGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEM--------------- 515

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS-S 402
                               I+PD Y   ++L  C   G LE+ K     + E + ++ +
Sbjct: 516 -------------------PIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPA 556

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            YV+  L ++YA  G  A+  ++   M  + IV
Sbjct: 557 TYVT--LANIYASAGMRAEEANIRETMDSRGIV 587


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/628 (38%), Positives = 372/628 (59%), Gaps = 23/628 (3%)

Query: 220  AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
            A+K+FD + +R+VVSW+ ++SG++ NG  +  L +F EM   G   +  T  T L  C  
Sbjct: 431  AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 490

Query: 280  CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              AL  G  +H F LK  F   +   N+L+DMYSKCG ++ A +VF ++ +RS++SW +M
Sbjct: 491  LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 550

Query: 340  IAGYAREGVFDGAIRLFRGMVREG---IEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            IAG+   G    A+  F GM++E      PD + +TS+L AC+  G++  GK +H ++  
Sbjct: 551  IAGFVHAGYGSKALDTF-GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 609

Query: 397  NDMQ--SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GAL 444
            +     SS  ++ +L+D+Y KCG +  A   F+Q+  K ++SW+++I           A+
Sbjct: 610  SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 669

Query: 445  DLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
             LF  + + N + D   ++ I+   A  A L +G+++    ++     + +V N++VDMY
Sbjct: 670  GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 729

Query: 504  VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            +KCG++  A   F  +  KD+ISWT++I GYG HG G  ++  F +M +  IEPDEV ++
Sbjct: 730  LKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 789

Query: 564  SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +VL ACSHSG++ EG   F+ +     I+P++EHYAC+VDLL R G L EA   I+ MP+
Sbjct: 790  AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 849

Query: 624  APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
             P+  IW +LL  CR+H +++L ++V + +  ++  N   YV+++N+Y +A  W E    
Sbjct: 850  KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNA 909

Query: 684  REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE-GYFPK 742
            RE  + +GLKK  G SW+EI+ +V+ F +G  SHP    I+  LK     ++ E GY   
Sbjct: 910  RELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYG 969

Query: 743  TRYALINADEMEKEVALCGHSEK----LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
             ++ L + D+  KE  L  HSEK    LA+A G LN   G+TIRV KNLRVC DCHE  K
Sbjct: 970  LKHELHDIDDESKEENLRAHSEKLAIGLALATGGLN-QKGKTIRVFKNLRVCVDCHEFIK 1028

Query: 799  FMSKTARREIVLRDSNRFHHFKDGRCSC 826
             +SK  +   V+RD+ RFH F+DG CSC
Sbjct: 1029 GLSKITKIAYVVRDAVRFHSFEDGCCSC 1056



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 226/455 (49%), Gaps = 49/455 (10%)

Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
           +  + L+ M+  C +     +VF+ +    V  W+ LM  +   G+ K SL LF +M   
Sbjct: 413 ITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ 472

Query: 193 GIAADSYTFSCVLK-----------------CLAV-------VGNSR--------RVKDA 220
           GI  + +TFS  LK                 CL +       VGNS         R+ +A
Sbjct: 473 GIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA 532

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM--LNLGFNVDLATMVTVLSGCA 278
            K+F  + DR ++SWN MI+G++  G   K L+ F  M   N+    D  T+ ++L  C+
Sbjct: 533 EKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACS 592

Query: 279 NCGALMFGRAVHAFALKACF--SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           + G +  G+ +H F +++ F      +   +L+D+Y KCG L  A + F+++ E++++SW
Sbjct: 593 STGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISW 652

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           +S+I GYA+EG F  A+ LF+ +     + D +A++SI+   A   LL  GK +     +
Sbjct: 653 SSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK 712

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
                   V N+++DMY KCG + +AE  F +M +KD++SW  +I           ++ +
Sbjct: 713 LPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRI 772

Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYV 504
           F  ML+ N EPD V    +L AC+    ++ G E+   +L  HGI         +VD+  
Sbjct: 773 FYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLG 832

Query: 505 KCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
           + G L  A+ L D +P K  +  W  +++   +HG
Sbjct: 833 RAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 867



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 162/393 (41%), Gaps = 77/393 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI----DTKTYCSILQLCADLKSLEDGKKVHS 120
           ++NA I  F   G   KA++     +++ I    D  T  S+L+ C+    +  GK++H 
Sbjct: 546 SWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 605

Query: 121 IICESGI-VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
            +  SG        +   LV ++V CG L   R+ F++I    +  W+ L+  Y++ G F
Sbjct: 606 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 665

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR----------------------- 216
            E++ LFK++Q L    DS+  S ++   A     R+                       
Sbjct: 666 VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSV 725

Query: 217 ---------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                    V +A K F E+  +DV+SW  +I+GY  +G+ +K + +F EML      D 
Sbjct: 726 VDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDE 785

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
              + VLS C++ G +  G  + +  L+       +     ++D+  + G L  A  + +
Sbjct: 786 VCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLID 845

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
            M                                   I+P+V    ++L  C   G +E+
Sbjct: 846 TM----------------------------------PIKPNVGIWQTLLSLCRVHGDIEL 871

Query: 387 GKDVHDYIKENDMQSSLYVSNALM--DMYAKCG 417
           GK+V   +   D ++    +N +M  ++Y + G
Sbjct: 872 GKEVGKILLRIDAKNP---ANYVMMSNLYGQAG 901


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/608 (38%), Positives = 362/608 (59%), Gaps = 14/608 (2%)

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N M+  Y   G + + ++++  M  +G  V+  T   VL  CA+    +FG  VH   ++
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
             F  ++     L+DMY+KCG++  A  VF++M  R VV WT+MI  Y +      A+ L
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           FR M  EG   D     S+  A    G   +   VH Y   N     + V N+++ MYAK
Sbjct: 221 FRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAK 280

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACI 464
           CG++  A  VF++M  ++ +SWN+M+           AL LF  M     +P+ VT   +
Sbjct: 281 CGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIM 340

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD--MIPAK 522
           + AC+ L +   GR++H +++   +  D  + NAI+DMY+KCG L  A  +F+   +  +
Sbjct: 341 VSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGER 400

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           D+ SW ++I+GYG+HG G +A+  F+ M+  G+EP++++F S+L ACSH+GL+DEG + F
Sbjct: 401 DVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCF 460

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
             M  + ++ P+++HYACMVD+L R G L+EA+R I+ +P  P   +WG+LL  CRIH  
Sbjct: 461 ADMT-KLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGN 519

Query: 643 VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIE 702
            +L E  A ++F+LEP++TGYYVL++N+YA + KW+EV+ +R+ +  RGLKK    S IE
Sbjct: 520 TELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIE 579

Query: 703 IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGH 762
              +V+ F     S P+ +++   ++ L +EMK  GY P     L + +  +KE  L  H
Sbjct: 580 FGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYH 639

Query: 763 SEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
           SEKLA+AFGI+ +  G  I+VTKNLRVC DCH   KF+S    R+I++RD NRFHHF+ G
Sbjct: 640 SEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGG 699

Query: 823 RCSCRGFW 830
           RCSC  +W
Sbjct: 700 RCSCGDYW 707



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/546 (26%), Positives = 255/546 (46%), Gaps = 70/546 (12%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK- 157
           Y  +LQ C  L +L   K +HS +   G ++      ++L+ ++   GDL   R +F+  
Sbjct: 28  YDHLLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHR 84

Query: 158 -------IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA- 209
                        F+ N ++  Y+  G   E++ L+  MQ +G+  +++T+  VLK  A 
Sbjct: 85  HHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS 144

Query: 210 ---------VVGNSRR----------------------VKDAHKLFDELSDRDVVSWNCM 238
                    V G   R                      + DAH++FD +  RDVV W  M
Sbjct: 145 ELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAM 204

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I+ Y       K L +F++M   GF  D  T ++V S     G      +VH +A+   F
Sbjct: 205 ITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGF 264

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             ++S  N+++ MY+KCG+++ A  VF++M ER+ +SW SM++GY + G    A+ LF  
Sbjct: 265 IGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQ 324

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M     +P+      ++ AC+  G   +G+ +H+++  + M     + NA+MDMY KCG 
Sbjct: 325 MQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGD 384

Query: 419 MADAESVFN--QMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACIL 465
           +  A  +FN  ++  +D+ SWN +I           AL+LF  M ++  EP+ +T   IL
Sbjct: 385 LDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSIL 444

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK--D 523
            AC+    ++ GR+    + +  +  +      +VDM  + G L  A  L   IP++  D
Sbjct: 445 SACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSD 504

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF---ISVLYACSHSGLVDEGWR 580
            + W  ++    +HG         N++ Q  +EP+   +   +S +YA S+       W+
Sbjct: 505 EV-WGALLLACRIHGNTELGEIAANNLFQ--LEPEHTGYYVLMSNIYAASNK------WK 555

Query: 581 FFNMMR 586
              M+R
Sbjct: 556 EVEMVR 561



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 177/373 (47%), Gaps = 35/373 (9%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           ++  TY  +L++CA       G+ VH  +  +G    D  + + LV M+  CG++ +   
Sbjct: 130 VNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFG-SDLFVEAALVDMYAKCGEIGDAHE 188

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VF+++    V  W  ++  Y +     ++L LF+KMQ  G   D  T   V   +  +G+
Sbjct: 189 VFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGD 248

Query: 214 SR--------------------------------RVKDAHKLFDELSDRDVVSWNCMISG 241
            R                                 V+ A  +FD + +R+ +SWN M+SG
Sbjct: 249 GRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSG 308

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y  NG     L +F +M     + +  T + ++S C+  G+   GR +H F + +    +
Sbjct: 309 YTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDID 368

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFE--KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +  N ++DMY KCGDLD A+ +F   ++GER V SW  +I+GY   G    A+ LF  M
Sbjct: 369 TTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRM 428

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             EG+EP+    TSIL AC+  GL++ G+     + +  ++  +     ++DM  + G +
Sbjct: 429 QVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFL 488

Query: 420 ADAESVFNQMPVK 432
            +A  +  ++P +
Sbjct: 489 NEAFRLIKKIPSR 501



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 195/413 (47%), Gaps = 26/413 (6%)

Query: 280 CGALMFGRAVHA-FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW-- 336
           C +L   + +H+  + +        F   L+ +YSK GDL  A  +F+            
Sbjct: 35  CTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQA 94

Query: 337 ------TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
                  +M+  YA  G    AI L+  M R G+  + +    +L  CA +     G+ V
Sbjct: 95  PNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVV 154

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  +      S L+V  AL+DMYAKCG + DA  VF++M ++D+V W  MI         
Sbjct: 155 HGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERP 214

Query: 443 --ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL LF  M +  F  D +T   +  A   L        +HGY + +G   D +V N+I
Sbjct: 215 LKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSI 274

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           V MY KCG +  AR +FD +  ++ ISW  M++GY  +G   DA++ FN M+ +  +P+ 
Sbjct: 275 VGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNP 334

Query: 560 VSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
           V+ + ++ ACS+ G    G +  N ++  + +I+  L +   ++D+  + G+L  A    
Sbjct: 335 VTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRN--AIMDMYMKCGDLDTAVEMF 392

Query: 619 EMMPVAP-DATIWGSLLCGCRIHHEVKLAEKVAE--HVFELEPDNTGYYVLLA 668
               +   D + W  L+ G  +H   K A ++     V  +EP++  +  +L+
Sbjct: 393 NNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILS 445


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/627 (36%), Positives = 358/627 (57%), Gaps = 13/627 (2%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + DA K+FD +  R V +WN MIS Y  +  + +   +F+ M + G   D  T +++L  
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C N   L  G+ V     +  F  ++     L+ MY++C   + A +VF +M ++++++W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           +++I  +A  G    A+R FR M +EGI P+     S+L+       LE    +H  I E
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE 240

Query: 397 NDMQSSLYVSNALMDMYAKC--GSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
           + +  +  +SNAL+++Y +C  G +  AE +  +M  + I +WN +I           AL
Sbjct: 241 HGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREAL 300

Query: 445 DLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           + +  + L+    D VT   +L AC S  +L  G+ IH   +  G+ +D  V NA+ +MY
Sbjct: 301 ETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMY 360

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +  AR +FD +P +  +SW  M+  Y  HG   + +     M Q G++ + ++F+
Sbjct: 361 SKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFV 420

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           SVL +CSH+GL+ EG ++F+ + ++  IE K EHY C+VDLL R G L EA ++I  MP 
Sbjct: 421 SVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPS 480

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            P+   W SLL  CR+H ++   +  A  + EL+P N+   V+L+N+Y+E   W+   KL
Sbjct: 481 EPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKL 540

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R  ++ R +KK PG S I++K KV+ F    +SHP A +I   ++ L   M+  GY P T
Sbjct: 541 RRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDT 600

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
           +  L + DE +KE  L  HSEKLA+AFG+++ P   ++ + KNLRVC DCH   KF+SK 
Sbjct: 601 KMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKI 660

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             REIV+RD++RFHHF+DG CSC+ +W
Sbjct: 661 TGREIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 210/415 (50%), Gaps = 18/415 (4%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           ML  G   ++ T + VL+   +  AL  G+ +H+   ++  S ++  N  L++ Y+KCG 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           L  A +VF+ M  RSV +W SMI+ Y+       A  +F+ M  EG   D     SIL A
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           C     L+ GK V + I E   +  L+V  AL+ MYA+C S  +A  VF +M  K++++W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180

Query: 438 NTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR 486
           + +I           AL  F  M Q    P+ VT   +L    + + LE    IH  I  
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE 240

Query: 487 HGISADRNVANAIVDMYVKC--GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
           HG+     ++NA+V++Y +C  G L +A  +   +  + + +W ++I GY +HG   +A+
Sbjct: 241 HGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREAL 300

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
            T+  ++   I  D+V+FISVL AC+ S  + EG +  +    EC ++  +     + ++
Sbjct: 301 ETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSNAVECGLDSDVIVKNALTNM 359

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
            S+ G++  A R  + MP+   A  W  +L     H E   +E+V + + ++E +
Sbjct: 360 YSKCGSMENARRIFDSMPIR-SAVSWNGMLQAYAQHGE---SEEVLKLIRKMEQE 410



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 222/495 (44%), Gaps = 48/495 (9%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E  K +  T+ ++L    D  +L  GK +HS + ES   +D  V  + LV  +  CG L 
Sbjct: 4   EGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFV-NTALVNTYTKCGSLT 62

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-- 207
           + R+VF+ +    V  WN ++  YS +    E+ ++F++MQ  G   D  TF  +L    
Sbjct: 63  DARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACV 122

Query: 208 ------------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNC 237
                                         + +    R  ++A ++F  +  +++++W+ 
Sbjct: 123 NPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSA 182

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I+ +  +G   + L  F+ M   G   +  T +++L+G      L     +H    +  
Sbjct: 183 IITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHG 242

Query: 298 FSKEISFNNTLLDMYSKC--GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
                + +N L+++Y +C  G+LD A  + ++M E+ + +W  +I GY   G    A+  
Sbjct: 243 LDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALET 302

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           ++ +  E I  D     S+L+AC     L  GK +H    E  + S + V NAL +MY+K
Sbjct: 303 YQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSK 362

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACI 464
           CGSM +A  +F+ MP++  VSWN M+ A          L L   M Q   + +G+T   +
Sbjct: 363 CGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSV 422

Query: 465 LPACASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK- 522
           L +C+    +  G +  H      GI         +VD+  + G L  A      +P++ 
Sbjct: 423 LSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEP 482

Query: 523 DLISWTIMIAGYGMH 537
           ++++W  ++    +H
Sbjct: 483 EIVTWASLLGACRVH 497



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 145/322 (45%), Gaps = 42/322 (13%)

Query: 62  KTKN---YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGK 116
           K KN   ++A I  F + G+  +A+      ++  I  +  T+ S+L        LE+  
Sbjct: 173 KQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELS 232

Query: 117 KVHSIICESGIVIDDGVLGSKLVFMFVTC--GDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           ++H +I E G+  D   + + LV ++  C  G+L     +  ++D  ++  WN+L++ Y+
Sbjct: 233 RIHLLITEHGL-DDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYT 291

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTF------------------------SCVLKCLAV 210
             G  +E+L  ++++Q   I  D  TF                         C L    +
Sbjct: 292 LHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVI 351

Query: 211 VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
           V N+          +++A ++FD +  R  VSWN M+  Y  +G +E+ L++ ++M   G
Sbjct: 352 VKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEG 411

Query: 263 FNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
             ++  T V+VLS C++ G +  G +  H+         +      L+D+  + G L  A
Sbjct: 412 VKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEA 471

Query: 322 IRVFEKM-GERSVVSWTSMIAG 342
            +   KM  E  +V+W S++  
Sbjct: 472 EKYISKMPSEPEIVTWASLLGA 493



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 15/275 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  I  +   G   +A+E       E   +D  T+ S+L  C    SL +GK +HS   
Sbjct: 283 WNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV 342

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           E G+   D ++ + L  M+  CG ++  RR+F+ +       WN ++  Y++ G  +E L
Sbjct: 343 ECGL-DSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVL 401

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDV----VSWNCM 238
            L +KM+  G+  +  TF  VL   +  G    + +  + F  L  DR +      + C+
Sbjct: 402 KLIRKMEQEGVKLNGITFVSVLSSCSHAG---LIAEGCQYFHSLGHDRGIEVKTEHYGCL 458

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           +      G A K  E  K +  +    ++ T  ++L  C     L  G+ + A  L    
Sbjct: 459 VDLL---GRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGK-LAARKLLELD 514

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
               S +  L ++YS+ GD   A ++   M  R V
Sbjct: 515 PGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRV 549


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/685 (36%), Positives = 383/685 (55%), Gaps = 48/685 (7%)

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +M   G+   +Y  S +L+   V  +      A  +FD + + +++ WN M  G+  +  
Sbjct: 10  QMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHALSSD 69

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
               L+++  M++LG   D  T   +L  CA       G+ +H   LK  F  +I  + +
Sbjct: 70  PVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTS 129

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF----------- 356
           L+ MY++ G L+ A +VF+    R VVS+T++IAGY   G  + A +LF           
Sbjct: 130 LISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSW 189

Query: 357 ----RGMVREG-----------------IEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
                G V  G                 + PD   + +++ ACA    +E+G+ VH +I 
Sbjct: 190 NAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWIN 249

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           ++   S+L + NAL+D+Y+K G +  A  +F+ +  KD++SWNT+IG          AL 
Sbjct: 250 DHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALL 309

Query: 446 LFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYI---LRHGISADRNVANAIVD 501
           LF  ML++ E P+ VTM  ILPACA L A++ GR IH YI   L+  ++   ++  +++D
Sbjct: 310 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLID 369

Query: 502 MYVKCGVLVLARSLFD-MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           MY KCG +  A+ +FD  +  + L +W  MI+G+ MHG    A   F+ MR  GIEPD++
Sbjct: 370 MYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDI 429

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F+ +L ACSHSG++D G   F  M     I PKLEHY CM+DLL  +G   EA   I  
Sbjct: 430 TFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINT 489

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ PD  IW SLL  C+IH  ++L E  A+ + ++EP N+G YVLL+N+YA A +W EV
Sbjct: 490 MPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEV 549

Query: 681 KKLREKISRRGLKKN-PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
            K+R  ++ +G+KK  PGCS IEI   V+ F+ G   HP  ++I  +L+ + + ++  G+
Sbjct: 550 AKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGF 609

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P T   L   +E  +E AL  HSEKLA+AFG+++   G  + + KNLRVC +CHE  K 
Sbjct: 610 VPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKL 669

Query: 800 MSKTARREIVLRDSNRFHHFKDGRC 824
           +SK  +REI+ RD  RF HF+DG C
Sbjct: 670 ISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 199/422 (47%), Gaps = 66/422 (15%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D   + S++ + A    LED +KV  I         D V  + L+  +V+ G ++  ++
Sbjct: 122 LDIYVHTSLISMYAQNGRLEDARKVFDISSHR-----DVVSYTALIAGYVSRGYIESAQK 176

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL-GIAADSYTFSCVLKCLA--- 209
           +F++I    V  WN ++  Y +TGN+KE+L LFK+M  +  +  D  T   V+   A   
Sbjct: 177 LFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSD 236

Query: 210 -----------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                        +      V+ A +LFD L ++DV+SWN +I 
Sbjct: 237 SIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIG 296

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF---ALKAC 297
           GY    + ++ L +F+EML  G   +  TM+++L  CA+ GA+  GR +H +    LK  
Sbjct: 297 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGV 356

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFE-KMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            +   S   +L+DMY+KCGD+D A +VF+  M  RS+ +W +MI+G+A  G  + A  +F
Sbjct: 357 VTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIF 416

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDV-HDYIKENDMQSSLYVSNALMDMYAK 415
             M   GIEPD      +L AC+  G+L++G+++     +  ++   L     ++D+   
Sbjct: 417 SRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGH 476

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALE 475
            G   +AE + N MP+                       EPDGV    +L AC     LE
Sbjct: 477 SGLFKEAEEMINTMPM-----------------------EPDGVIWCSLLKACKIHGNLE 513

Query: 476 RG 477
            G
Sbjct: 514 LG 515



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 164/393 (41%), Gaps = 76/393 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++NA I  + E GN ++A+E+   +      + D  T  +++  CA   S+E G+ VHS 
Sbjct: 188 SWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSW 247

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I + G   +  ++ + L+ ++   G+++    +F+ + N  V  WN L+  Y+    +KE
Sbjct: 248 INDHGFASNLKIVNA-LIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKE 306

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----------SRRVKD----------- 219
           +L LF++M   G   +  T   +L   A +G            ++++K            
Sbjct: 307 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTS 366

Query: 220 -------------AHKLFD-ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                        A ++FD  +S+R + +WN MISG+  +G A    ++F  M   G   
Sbjct: 367 LIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEP 426

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T V +LS C++ G L  GR +     +     EI+     L+ Y    DL G     
Sbjct: 427 DDITFVGLLSACSHSGMLDLGRNIFRSMTRGY---EIT---PKLEHYGCMIDLLG----- 475

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
                                G+F  A  +   M    +EPD     S+L AC   G LE
Sbjct: 476 -------------------HSGLFKEAEEMINTM---PMEPDGVIWCSLLKACKIHGNLE 513

Query: 386 IGKD-VHDYIKENDMQSSLYVSNALMDMYAKCG 417
           +G+      IK     S  YV   L ++YA  G
Sbjct: 514 LGESFAKKLIKIEPGNSGSYV--LLSNIYAAAG 544


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/691 (34%), Positives = 392/691 (56%), Gaps = 44/691 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T   +++ CA L ++  G+ VH      G+  +D  +GS LV M+   G L   R  
Sbjct: 140 DAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLA-NDVYVGSALVKMYADAGLLGNARDA 198

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL--------- 205
           F+ I      +WN++M    K G+   ++ LF+ M++ G   +  T +C L         
Sbjct: 199 FDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADL 258

Query: 206 -----------KC------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                      KC            LA+    + + DA +LF+ +   D+V+WN MISG 
Sbjct: 259 LSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGC 318

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           + NG+  +   +F +M   G   D  T+V++L    +   L  G+ VH + ++ C + ++
Sbjct: 319 VQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDV 378

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              + L+D+Y KC D+  A  +++      VV  ++MI+GY   G+ + A+++FR ++ +
Sbjct: 379 FLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQ 438

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
            I+P+   I S+L  CA    L +G+ +H Y+  N  +   YV +ALMDMYAKCG +  +
Sbjct: 439 CIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLS 498

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
             +F +M  KD V+WN+MI           ALDLF  M ++  + + +T++  L ACASL
Sbjct: 499 HYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASL 558

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            A+  G+EIHG  ++  I AD    +A++DMY KCG L LA  +F+ +P K+ +SW  +I
Sbjct: 559 PAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSII 618

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           + YG HG   ++++  + M++ G +PD V+F++++ AC+H+GLV+EG + F  M  +  I
Sbjct: 619 SAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLI 678

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P++EH+ACMVDL SR+G L +A +FI  MP  PDA IWG+LL  CR+H  V+LA+  ++
Sbjct: 679 APRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQ 738

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            +F+L+P N+GYYVL++N+ A A +W+ V K+R  +    + K PG SW+++    ++FV
Sbjct: 739 ELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFV 798

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           A   SHP ++ I + LK L  E++ EGY P+
Sbjct: 799 ASDKSHPESEDIYTSLKTLLQELREEGYVPR 829



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 162/328 (49%), Gaps = 19/328 (5%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKA---CFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
           ++ VL GC +   L  G  +HA A+ +        ++ +  LL MY        A+ VF 
Sbjct: 35  LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 327 KMGERSVVS---WTSMIAGYAREGVFDGAIRLFRGMVRE--GIEPDVYAITSILHACACD 381
            +   +  S   W  +I G+   G    A+  +  M        PD + +  ++ +CA  
Sbjct: 95  ALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
           G + +G+ VH   +   + + +YV +AL+ MYA  G + +A   F+ +P +D V WN M+
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMM 214

Query: 442 ------GALDLFVAMLQNF-----EPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                 G +D  V + +N      EP+  T+AC L  CA+ A L  G ++H   ++ G+ 
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLE 274

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
            +  VAN ++ MY KC  L  A  LF+++P  DL++W  MI+G   +G   +A   F DM
Sbjct: 275 PEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDM 334

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +++G  PD ++ +S+L A +    + +G
Sbjct: 335 QRSGARPDSITLVSLLPALTDLNGLKQG 362



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 21/286 (7%)

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSS---LYVSNALMDMYAKCGSMADAESVFN 427
           + ++L  C     L +G  +H     +   S    L +   L+ MY       DA +VF+
Sbjct: 35  LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 428 QMPVKDIVS---WNTMIG----------ALDLFVAMLQNF---EPDGVTMACILPACASL 471
            +P     S   WN +I           A+  +V M  +     PD  T+  ++ +CA+L
Sbjct: 95  ALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            A+  GR +H      G++ D  V +A+V MY   G+L  AR  FD IP +D + W +M+
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMM 214

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
            G    G    A+  F +MR +G EP+  +    L  C+    +  G +  ++   +C +
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLA-VKCGL 273

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           EP++     ++ + ++   L +A+R  E+MP   D   W  ++ GC
Sbjct: 274 EPEVAVANTLLAMYAKCQCLDDAWRLFELMP-QDDLVTWNGMISGC 318



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 34/269 (12%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T  S+L  CA + +L  G+++H  +  +        + S L+ M+  CG L    
Sbjct: 441 KPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYE-RKCYVESALMDMYAKCGRLDLSH 499

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            +F K+       WN ++  +S+ G  +E+L LF++M   GI  ++ T S  L   A + 
Sbjct: 500 YIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLP 559

Query: 213 NSRRVKDAH--------------------------------KLFDELSDRDVVSWNCMIS 240
                K+ H                                ++F+ + D++ VSWN +IS
Sbjct: 560 AIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIIS 619

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFS 299
            Y A+G+ ++ + +   M   G+  D  T + ++S CA+ G +  G +       K   +
Sbjct: 620 AYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIA 679

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
             +     ++D+YS+ G LD AI+    M
Sbjct: 680 PRMEHFACMVDLYSRSGKLDKAIQFIADM 708



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 14/220 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N+ I  F + G  ++A+++      E  K +  T  + L  CA L ++  GK++H + 
Sbjct: 512 TWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVT 571

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G +  D    S L+ M+  CG+L+   RVF  + +     WN ++  Y   G  KES
Sbjct: 572 IK-GPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKES 630

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNC 237
           + L   MQ  G   D  TF  ++   A  G    V++  +LF  ++ + +++     + C
Sbjct: 631 VSLLHGMQEEGYKPDHVTFLALISACAHAG---LVEEGVQLFQCMTKKYLIAPRMEHFAC 687

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           M+  Y  +G  +K ++   +M    F  D      +L  C
Sbjct: 688 MVDLYSRSGKLDKAIQFIADM---PFKPDAGIWGALLHAC 724


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/625 (37%), Positives = 354/625 (56%), Gaps = 12/625 (1%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + DA K+FDE+ +R++VSWN +IS Y  NGV +KG  +F  ML L    + +T +  L  
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
             N   L  G+ +H+ A+++      S N  + +MY KCG L+GA  VFEKM E++ V+W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T ++ GY +      A+ LF  MV EG+E D Y  + +L ACA    L  G+ +H +I +
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVK 240

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA---LDLFVAMLQN 453
             ++S + V   L+D Y KC ++  A   F  +   + VSW+ +I     +  F   L+ 
Sbjct: 241 LGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKT 300

Query: 454 FEP--------DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           FE         +  T   I  AC++LA    G + H   ++  + A ++  +A++ MY +
Sbjct: 301 FESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSR 360

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           CG L  A  +F+ I   D ++WT +IAGY   G   +A+  F  M+  G+ P+ V+FI+V
Sbjct: 361 CGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAV 420

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L ACSHSGLV EG ++   M     +   ++HY CMVD+ SR G L EA   I  MP +P
Sbjct: 421 LTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSP 480

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
           DA  W  LL GC  +  +++ E  AE++F+L+P++T  Y+L+ N+YA   KW+E   +R+
Sbjct: 481 DAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRK 540

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            ++ R L+K   CSWI +KGKV+ F+ G   HP  ++I S L+ L   + +E     T  
Sbjct: 541 MMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTEE 600

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            + N+    KE  L  HSE+LA+AFG+++ P+   + V KNLR C DCH+  K +S    
Sbjct: 601 DVSNSLPERKEQLLV-HSERLALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITG 659

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REIV+RDS RFHHFK G CSC  +W
Sbjct: 660 REIVVRDSFRFHHFKLGECSCNDYW 684



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 194/394 (49%), Gaps = 21/394 (5%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           M + G +V   +   +   C    +L  GR  H    +   +      N++L MY KCG 
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           L  A +VF++M ER++VSW ++I+ YA  GVFD    +F  M+    +P+       L +
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
                 LEIGK +H +   + + S+  V+ A+ +MY KCG +  AE VF +M  K+ V+W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180

Query: 438 N-TMIG---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR 486
              M+G         AL LF  M+ +  E D    + +L ACA L  L  GR+IHG+I++
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVK 240

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
            G+ ++ +V   +VD YVKC  L  A   F+ I   + +SW+ +I GY   G   +A+ T
Sbjct: 241 LGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKT 300

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY----ACMV 602
           F  +R   ++ +  ++ S+  ACS     + G        +   I+  L  Y    + M+
Sbjct: 301 FESLRTRSVDINSFTYTSIFQACSALADFNSG-----AQAHADAIKSSLVAYQHGESAMI 355

Query: 603 DLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            + SR G L  A R  E +   PDA  W +++ G
Sbjct: 356 TMYSRCGRLDYATRVFESID-DPDAVAWTAIIAG 388



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 222/485 (45%), Gaps = 46/485 (9%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +  ++Y  + + C  +KSL DG+  H  + +  +      L + ++ M+  CG L + R+
Sbjct: 8   VSPRSYKCLFEACGKIKSLFDGRLFHEQM-QRTVKNPPEFLENSVLKMYCKCGSLADARK 66

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL----- 208
           VF+++    +  WN ++  Y++ G F +   +F  M  L    +  T+   L+ L     
Sbjct: 67  VFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSG 126

Query: 209 -------------AVVGNSRRV--------------KDAHKLFDELSDRDVVSWNCMISG 241
                        + +G++  V              + A  +F+++S+++ V+W  ++ G
Sbjct: 127 LEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVG 186

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y         L +F +M+N G  +D      VL  CA    L FGR +H   +K     E
Sbjct: 187 YTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESE 246

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +S    L+D Y KC +L+ A + FE + E + VSW+++I GY + G F+ A++ F  +  
Sbjct: 247 VSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRT 306

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
             ++ + +  TSI  AC+       G   H    ++ + +  +  +A++ MY++CG +  
Sbjct: 307 RSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDY 366

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACAS 470
           A  VF  +   D V+W  +I           AL LF  M      P+ VT   +L AC+ 
Sbjct: 367 ATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSH 426

Query: 471 LAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWT 528
              +  GR+ +      +G++   +  + +VD+Y + G L  A  L   +P + D +SW 
Sbjct: 427 SGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWK 486

Query: 529 IMIAG 533
            ++ G
Sbjct: 487 CLLGG 491



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 198/416 (47%), Gaps = 39/416 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSE---KSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  I  + E G  +K    ++S+    ++K +  TY   L+   +   LE GK++HS 
Sbjct: 78  SWNTIISAYAENGVFDKGF-CMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSH 136

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
              SG+  +  V  + +  M+V CG L+    VF K+       W  +M  Y++     +
Sbjct: 137 AIRSGLGSNASV-NTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMD 195

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS--- 214
           +L LF KM + G+  D Y FS VLK  A                         VG     
Sbjct: 196 ALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVD 255

Query: 215 -----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                  ++ A K F+ +S+ + VSW+ +I+GY   G  E+ L+ F+ +     +++  T
Sbjct: 256 FYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFT 315

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
             ++   C+       G   HA A+K+         + ++ MYS+CG LD A RVFE + 
Sbjct: 316 YTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESID 375

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           +   V+WT++IAGYA +G    A++LFR M   G+ P+     ++L AC+  GL+  G+ 
Sbjct: 376 DPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQ 435

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
             + +  N  + +++   + ++D+Y++ G + +A  +   MP   D +SW  ++G 
Sbjct: 436 YLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 21/279 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           +++A I  +C++G  E+A++   S     +D    TY SI Q C+ L     G + H+  
Sbjct: 280 SWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADA 339

Query: 123 CESGIV-IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            +S +V    G   S ++ M+  CG L    RVF  ID+     W  ++  Y+  GN  E
Sbjct: 340 IKSSLVAYQHG--ESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPE 397

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WN 236
           +L LF++MQ  G+  ++ TF  V   L    +S  V +  +  + +S    V+     ++
Sbjct: 398 ALKLFRRMQDCGVRPNAVTFIAV---LTACSHSGLVIEGRQYLESMSSNYGVATTIDHYD 454

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR--AVHAFAL 294
           CM+  Y   G  ++ LE+ + M    F+ D  +   +L GC     L  G   A + F L
Sbjct: 455 CMVDIYSRAGFLQEALELIRSM---PFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQL 511

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
                ++ +    + ++Y+  G    A  V + M ER++
Sbjct: 512 DP---EDTAGYILMFNLYASFGKWKEAANVRKMMAERNL 547


>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
          Length = 645

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/579 (40%), Positives = 343/579 (59%), Gaps = 26/579 (4%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           T+L  C    A+  GR +HA  L +    +      L+D+Y+ CG +  A RVF++M  +
Sbjct: 73  TILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMPNQ 132

Query: 332 -SVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKD 389
            +V  W  +I  YAR+G  + AI L+R M+  G ++PD +    +L ACA    L  G++
Sbjct: 133 GNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGRE 192

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVA 449
           VHD +   +  + ++V   L+DMYAKCG M +A +VFN   ++D   WN+MI A      
Sbjct: 193 VHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACG---- 248

Query: 450 MLQNFEPDGVTMAC-------ILPACASLAA----------LERGREIHGYILRHGISAD 492
             QN  P      C       I P  A+L +          L RGRE+HGY  R G  + 
Sbjct: 249 --QNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQ 306

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR- 551
             +  +++DMY K G +++A  LF+ +  ++LISW  MI G+GMHG    A   F+ MR 
Sbjct: 307 DKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRS 366

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
           +A + PD ++F+ VL AC+H G+V E    F++M    +I+P ++HY C+VD+L  +G  
Sbjct: 367 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRF 426

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
            EA   I+ M V PD+ IWG+LL GC+IH  V+LAE   + + ELEP++ G YVLL+N+Y
Sbjct: 427 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIY 486

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           AE+ KWEE  ++R+ ++ RGLKK   CSWIE+KGK + F+ G +SHP +  I   L+RL 
Sbjct: 487 AESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLE 546

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
             + + GY P T     N ++ EK   + GHSE+LA+AFG+++ P    + VTKNLRVC 
Sbjct: 547 GLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCE 606

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH + K +S+  +REI++RD NR+HHF +G CSC+  W
Sbjct: 607 DCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 189/387 (48%), Gaps = 38/387 (9%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S  +   Y +IL+ C   +++  G+++H+ +  SG  +D  VL ++LV ++ +CG +   
Sbjct: 64  SPYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLD-AVLATRLVDLYASCGHVSLA 122

Query: 152 RRVFNKIDN-GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLK-CL 208
           RRVF+++ N G VF+WN+L+  Y++ G  + ++ L++ M + G +  D++T+  VLK C 
Sbjct: 123 RRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACA 182

Query: 209 AVVGNS--RRVKD-----------------------------AHKLFDELSDRDVVSWNC 237
           A++  S  R V D                             A  +F++ + RD   WN 
Sbjct: 183 ALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNS 242

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MI+    NG   + L + + M   G    +AT+V+ +S  A   AL  GR +H +  +  
Sbjct: 243 MIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRG 302

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F  +     +LLDMY+K G +  A  +FE++  R ++SW +MI G+   G  D A  LF 
Sbjct: 303 FGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFS 362

Query: 358 GMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAK 415
            M  E  + PD      +L AC   G+++  K+V D  +    ++ ++     L+D+   
Sbjct: 363 RMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGH 422

Query: 416 CGSMADAESVFNQMPVK-DIVSWNTMI 441
            G   +A  V   M VK D   W  ++
Sbjct: 423 SGRFKEASDVIKGMLVKPDSGIWGALL 449



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 134/278 (48%), Gaps = 14/278 (5%)

Query: 217 VKDAHKLFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVL 274
           V  A ++FDE+ ++ +V  WN +I  Y  +G  E  +E+++ ML  G    D  T   VL
Sbjct: 119 VSLARRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVL 178

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             CA    L  GR VH   ++  ++ ++     L+DMY+KCG +D A  VF     R   
Sbjct: 179 KACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAA 238

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
            W SMIA   + G    A+ L R M  EGI P +  + S + A A    L  G+++H Y 
Sbjct: 239 VWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYG 298

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GAL 444
                 S   +  +L+DMYAK G +  A  +F Q+  ++++SWN MI           A 
Sbjct: 299 WRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAF 358

Query: 445 DLFVAMLQNFE--PDGVTMACILPACASLAALERGREI 480
           +LF  M    +  PD +T   +L AC     ++  +E+
Sbjct: 359 ELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEV 396



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 167/425 (39%), Gaps = 78/425 (18%)

Query: 66  YNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +N  I  +   G  E A+E+   + +    K D  TY  +L+ CA L  L  G++VH  +
Sbjct: 138 WNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRV 197

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +    D  V  + L+ M+  CG + E   VFN        +WN ++    + G   E+
Sbjct: 198 MRTNWATDVFVC-TGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEA 256

Query: 183 LYLFKKMQSLGIAADSYTFSCVL--------------------------------KCLAV 210
           L L + M + GIA    T    +                                  L +
Sbjct: 257 LTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDM 316

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLAT 269
              S  V  AH LF++L  R+++SWN MI G+  +G A+   E+F  M +      D  T
Sbjct: 317 YAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHIT 376

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V VLS C + G  M   A   F L             ++ +YS                
Sbjct: 377 FVGVLSACNHGG--MVQEAKEVFDL-------------MVTVYSI--------------- 406

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK- 388
           + +V  +T ++      G F  A  + +GM+   ++PD     ++L+ C     +E+ + 
Sbjct: 407 KPTVQHYTCLVDVLGHSGRFKEASDVIKGML---VKPDSGIWGALLNGCKIHKNVELAEL 463

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP---VKDIV--SWNTMIGA 443
            +   I+     +  YV   L ++YA+ G   +A  V   M    +K I+  SW  + G 
Sbjct: 464 ALQKLIELEPEDAGNYV--LLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGK 521

Query: 444 LDLFV 448
              F+
Sbjct: 522 FHGFL 526



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 10/181 (5%)

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
           A IL +C    A+  GR++H  +L  G   D  +A  +VD+Y  CG + LAR +FD +P 
Sbjct: 72  ATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMPN 131

Query: 522 K-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEGW 579
           + ++  W ++I  Y   G    AI  +  M   G ++PD  ++  VL AC+    +  G 
Sbjct: 132 QGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGR 191

Query: 580 RFFN-MMRYECNIEPKLEHYAC--MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
              + +MR     +     + C  ++D+ ++ G + EA+       +  DA +W S++  
Sbjct: 192 EVHDRVMRTNWATDV----FVCTGLIDMYAKCGCMDEAWAVFNDTTIR-DAAVWNSMIAA 246

Query: 637 C 637
           C
Sbjct: 247 C 247


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 258/745 (34%), Positives = 386/745 (51%), Gaps = 45/745 (6%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D  L + ++ M+  C   ++ R+VF++I     F W++L+  Y +   ++E+L ++K+M 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 191 SLGIAADSYTFSCVLKC---LAVVGNSRRVK----------------------------- 218
              I+ D+YT S VL     L  V   R V+                             
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 219 DAHKLFDELSD-RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           +A  +F  +   RD++S   MI  Y+ +G  +  L+ + +M + G   D  T   +L  C
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           ++   L+ G+ +H   L++     IS  N L+ MY+KCG L  +  +F  M  + VVSW 
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           +MIA Y   G    A  LF  M   G  PD+Y  +SIL ACA    LE G+ +H  I   
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVA-------- 449
                  + N L+ M+ +CGS+  A   F  +  K++ +WNTM+ A   F          
Sbjct: 301 GFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLY 360

Query: 450 ---MLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
              +L+ F PD  T + ++ +CASL AL  G+ IH      G   D  +  A+V+MY KC
Sbjct: 361 KNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKC 420

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G L  A+  FD I  KD++SW+ MIA    HG   +A+   + M   GI  +EV+  SVL
Sbjct: 421 GSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVL 480

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
           +ACSH G + EG  +F  +  +  IE   E+    +DLL R G L EA   +  MP    
Sbjct: 481 HACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVS 540

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
                +LL GC++H +V+  + + + +  LEP+N G YVLL N+YA A +W++V KLR  
Sbjct: 541 FVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRY 600

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMK-REGYFPKTRY 745
           + ++G+K+  GCS IE + K+  F  G +S+P   +I + L+RL   MK  EGY P TR 
Sbjct: 601 MRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRD 660

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
              +  + +KE  L  HSEK+AM FG++  P G T+R+ KNLRVC DCH + K  SK   
Sbjct: 661 VFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKITG 720

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           R I++RD  RFHHF+ G CSC  +W
Sbjct: 721 RRIIVRDGTRFHHFEGGICSCGDYW 745



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 238/515 (46%), Gaps = 51/515 (9%)

Query: 74  CEVGN--LEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVI 129
           C V N   ++A+EV     + +I  D  T  S+L  C  L  +E+G+ V     E G   
Sbjct: 42  CYVQNAMYQEALEVYKEMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFE- 100

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIW-NLLMHEYSKTGNFKESLYLFKK 188
            D V+ + L+ +F  CG L+E   VF  +   +  I    ++  Y + G    +L  + K
Sbjct: 101 KDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWK 160

Query: 189 MQSLGIAADSYTFSCVLKC--------------------------------LAVVGNSRR 216
           M+S G+  D++T++ +L                                  + +      
Sbjct: 161 MRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGS 220

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           +KD+  LF  +  +DVVSWN MI+ Y   G  +    +F  M  LG   D+ T  ++L  
Sbjct: 221 LKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGA 280

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA+   L  GR +H       F ++ +  N L+ M+++CG L+ A R F  + ++ + +W
Sbjct: 281 CASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAW 340

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            +M+A YA+      A+ L++ M+ EG  PD +  +S++ +CA  G L  GK +H+    
Sbjct: 341 NTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTS 400

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
              +  + +  AL++MYAKCGS+ADA+  F+ +  KD+VSW+ MI           AL+L
Sbjct: 401 CGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALEL 460

Query: 447 FVAM-LQNFEPDGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYV 504
              M LQ    + VT + +L AC+    L  G +   G     GI  D       +D+  
Sbjct: 461 SHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLG 520

Query: 505 KCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
           + G L  A  +   +P K   ++   ++ G  +HG
Sbjct: 521 RAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHG 555



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 132/326 (40%), Gaps = 48/326 (14%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKI-------------------------------- 94
           N  I  F   G+LE A    YS EK ++                                
Sbjct: 310 NNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFT 369

Query: 95  -DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
            D  T+ S++  CA L +L +GK +H      G    D +LG+ LV M+  CG L + ++
Sbjct: 370 PDRFTFSSVVDSCASLGALREGKFIHECSTSCGFE-KDVILGTALVNMYAKCGSLADAKK 428

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
            F+ I N  V  W+ ++   ++ G+ +E+L L   M   GIA +  T S VL   +  G 
Sbjct: 429 SFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGG- 487

Query: 214 SRRVKDAHKLFDELS-----DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
             R+ +    F  LS     +RD  +    I      G  ++   V   M    F V   
Sbjct: 488 --RLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTM---PFKVSFV 542

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL-DMYSKCGDLDGAIRVFEK 327
            +VT+L GC   G +  G+A+    +      E   +  LL +MY+  G  D   ++   
Sbjct: 543 ALVTLLGGCKVHGDVRRGKALTKRIV--ALEPENPGSYVLLNNMYAAAGRWDDVAKLRRY 600

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAI 353
           M ++ V   T   +   R+ +++ ++
Sbjct: 601 MRKKGVKRQTGCSSIEYRDKIYEFSV 626


>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 852

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 257/740 (34%), Positives = 379/740 (51%), Gaps = 82/740 (11%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           + +V  +   G L E R +FN   +     W+ L+  Y + G   E+  LFK+M+  G  
Sbjct: 150 NTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQK 209

Query: 196 ADSYTFSCVLKCLAVVG--------------------------------NSRRVKDAHKL 223
              YT   +L+  + +G                                  R + +A  L
Sbjct: 210 PSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEIL 269

Query: 224 FDELS--DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           F  L+    + V W  M++GY  NG   K +E F+ M   G   +  T  ++L+ C++  
Sbjct: 270 FKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVS 329

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
           A  FG  VH   ++  F       + L+DMY+KCGDL  A RV E M +  VVSW SMI 
Sbjct: 330 AHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIV 389

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           G  R G  + AI LF+ M    ++ D Y   S+L+ C   G ++ GK VH  + +   ++
Sbjct: 390 GCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIV-GRID-GKSVHCLVIKTGFEN 447

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM- 450
              VSNAL+DMYAK   +  A +VF +M  KD++SW +++           +L  F  M 
Sbjct: 448 YKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMR 507

Query: 451 LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
           +    PD   +A IL ACA L  LE G+++H   ++ G+ +  +V N++V MY KCG L 
Sbjct: 508 ISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLD 567

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            A ++F  +  +D+I+WT +I GY  +G G D++                          
Sbjct: 568 DADAIFVSMHVRDVITWTALIVGYARNGKGRDSL-------------------------- 601

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
                    ++F  M+    IEP  EHYACM+DL  R G L EA   +  M V PDAT+W
Sbjct: 602 ---------KYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVW 652

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
            +LL  CR+H  ++L E+ A ++FELEP N   YV+L+N+Y  A KW++  K+R  +  +
Sbjct: 653 KALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSK 712

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           G+ K PGCSWIE+  +++ F++    HP   +I S +  +   +K  GY P   ++L + 
Sbjct: 713 GITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLHDM 772

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           D   KE  L  HSEKLA+AFG+L  P G  IR+ KNLRVCGDCH   K++S    R I+L
Sbjct: 773 DREGKEAGLAYHSEKLAVAFGLLASPPGAPIRIFKNLRVCGDCHSAMKYISGVFTRHIIL 832

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RDSN FHHFK+G CSC  +W
Sbjct: 833 RDSNCFHHFKEGECSCEDYW 852



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 160/541 (29%), Positives = 274/541 (50%), Gaps = 28/541 (5%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           +F  N L++  SK+G   ++  LF KM    +  D YT++ ++   A VG   R+ +A +
Sbjct: 115 IFHSNQLLNGLSKSGQIDDARELFDKM----LQRDEYTWNTMVSGYANVG---RLVEARE 167

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           LF+  S R  ++W+ +ISGY   G   +  ++FK M   G      T+ ++L GC+  G 
Sbjct: 168 LFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGL 227

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG--ERSVVSWTSMI 340
           +  G  +H + +K  F   +     L+DMY+KC  +  A  +F+ +   + + V WT+M+
Sbjct: 228 IQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMV 287

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
            GYA+ G    AI  FR M  EG+E + +   SIL AC+       G+ VH  I  N   
Sbjct: 288 TGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFG 347

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM 450
            + YV +AL+DMYAKCG +  A+ V   M   D+VSWN+MI           A+ LF  M
Sbjct: 348 CNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKM 407

Query: 451 -LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
             +N + D  T   +L  C  +     G+ +H  +++ G    + V+NA+VDMY K   L
Sbjct: 408 HARNMKIDHYTFPSVLNCC--IVGRIDGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDL 465

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             A ++F+ +  KD+ISWT ++ GY  +G   +++ TF DMR +G+ PD+    S+L AC
Sbjct: 466 NCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSAC 525

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           +   L++ G +  +    +  +   L     +V + ++ G L +A      M V  D   
Sbjct: 526 AELTLLEFGKQVHSDF-IKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVR-DVIT 583

Query: 630 WGSLLCGCRIHHEVKLAEKVAEH---VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
           W +L+ G   + + + + K  +    ++ +EP    +Y  + +++    K +E K++  +
Sbjct: 584 WTALIVGYARNGKGRDSLKYFQQMKKIYGIEP-GPEHYACMIDLFGRLGKLDEAKEILNQ 642

Query: 687 I 687
           +
Sbjct: 643 M 643



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 247/501 (49%), Gaps = 62/501 (12%)

Query: 71  GRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           GR  E  +L K M +    E  K    T  SIL+ C+ L  ++ G+ +H  + ++G   +
Sbjct: 191 GRQAEAFDLFKRMRL----EGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESN 246

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKI--DNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
             V+   LV M+  C  + E   +F  +  + G   +W  ++  Y++ G+  +++  F+ 
Sbjct: 247 VYVVAG-LVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRY 305

Query: 189 MQSLGIAADSYTFSCVLK------------------------CLAVVGNSR--------R 216
           M + G+ ++ +TF  +L                         C A V ++          
Sbjct: 306 MHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGD 365

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           +  A ++ + + D DVVSWN MI G + +G  E+ + +FK+M      +D  T  +VL+ 
Sbjct: 366 LGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNC 425

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C      + G++VH   +K  F      +N L+DMY+K  DL+ A  VFEKM E+ V+SW
Sbjct: 426 CIV--GRIDGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISW 483

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH-DYIK 395
           TS++ GY + G  + +++ F  M   G+ PD + + SIL ACA   LLE GK VH D+IK
Sbjct: 484 TSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIK 543

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALD 445
              ++SSL V+N+L+ MYAKCG + DA+++F  M V+D+++W  +I           +L 
Sbjct: 544 LG-LRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLK 602

Query: 446 LFVAM--LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            F  M  +   EP     AC++     L  L+  +EI   + +  +  D  V  A++   
Sbjct: 603 YFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEI---LNQMDVKPDATVWKALLAAC 659

Query: 504 VKCGVLVL----ARSLFDMIP 520
              G L L    A +LF++ P
Sbjct: 660 RVHGNLELGERAATNLFELEP 680



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 191/385 (49%), Gaps = 56/385 (14%)

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG-------VFDG- 351
           + I  +N LL+  SK G +D A  +F+KM +R   +W +M++GYA  G       +F+G 
Sbjct: 113 QSIFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGF 172

Query: 352 -----------------------AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                                  A  LF+ M  EG +P  Y + SIL  C+  GL++ G+
Sbjct: 173 SSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGE 232

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK--DIVSWNTMIG---- 442
            +H Y+ +N  +S++YV   L+DMYAKC  +++AE +F  +     + V W  M+     
Sbjct: 233 MIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQ 292

Query: 443 ------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 A++ F  M  +  E +  T   IL AC+S++A   G ++HG I+R+G   +  V
Sbjct: 293 NGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYV 352

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            +A+VDMY KCG L  A+ + + +   D++SW  MI G   HGF  +AI  F  M    +
Sbjct: 353 QSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNM 412

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA----CMVDLLSRTGNL 611
           + D  +F SVL  C   G +D G     ++     I+   E+Y      +VD+ ++T +L
Sbjct: 413 KIDHYTFPSVLNCCI-VGRID-GKSVHCLV-----IKTGFENYKLVSNALVDMYAKTEDL 465

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCG 636
           + AY   E M    D   W SL+ G
Sbjct: 466 NCAYAVFEKM-FEKDVISWTSLVTG 489



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 195/412 (47%), Gaps = 70/412 (16%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIIC 123
           + A +  + + G+  KA+E         +++   T+ SIL  C+ + +   G++VH  I 
Sbjct: 283 WTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIV 342

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            +G   +   + S LV M+  CGDL   +RV   +++  V  WN ++    + G  +E++
Sbjct: 343 RNGFGCN-AYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAI 401

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCL---------------------------AVVGNSRR 216
            LFKKM +  +  D YTF  VL C                            A+V    +
Sbjct: 402 LLFKKMHARNMKIDHYTFPSVLNCCIVGRIDGKSVHCLVIKTGFENYKLVSNALVDMYAK 461

Query: 217 VKD---AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
            +D   A+ +F+++ ++DV+SW  +++GY  NG  E+ L+ F +M   G + D   + ++
Sbjct: 462 TEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASI 521

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           LS CA    L FG+ VH+  +K      +S NN+L+ MY+KCG LD A  +F  M  R V
Sbjct: 522 LSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDV 581

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           ++WT++I GYAR G    +++ F+ M +  GIEP         +AC              
Sbjct: 582 ITWTALIVGYARNGKGRDSLKYFQQMKKIYGIEPGPEH-----YAC-------------- 622

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
                           ++D++ + G + +A+ + NQM VK D   W  ++ A
Sbjct: 623 ----------------MIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAA 658


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/736 (34%), Positives = 403/736 (54%), Gaps = 51/736 (6%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G++   +++F+++    V  +N+L+  Y   G + +++ LF + +   +  D ++++ VL
Sbjct: 58  GEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVL 117

Query: 206 KC---------------LAVV---GNS--------------RRVKDAHKLFDELSDRDVV 233
                            LA+V   G                 R+  A  LF+   + D V
Sbjct: 118 SACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNV 177

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC-ANCGALM-FGRAVHA 291
           SWN +I+GY   G  E+ L++  +M + G  ++  T+ + L  C  N   ++ +G+ +H 
Sbjct: 178 SWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHG 237

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
           + +K     +I     LLDMY+K G L  AI++F     ++VV + +MIAG+ +    D 
Sbjct: 238 YTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDK 297

Query: 352 -----AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
                A++LF  M R+GI+P  +  +SI+  C      E GK +H +I ++++QS  ++ 
Sbjct: 298 ECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIG 357

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE- 455
           + L+++Y+  GS  D    FN  P  DIVSW TMI           AL LF  +L + + 
Sbjct: 358 STLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKK 417

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           PD   +  +L ACA +AA   G ++HGY ++ GI     V N+ + MY K G L  A+  
Sbjct: 418 PDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKIT 477

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           F+ I   D++SW++MI     HG   DAI  F  M+  GI P++++F+ VL ACSH GLV
Sbjct: 478 FEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLV 537

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           +EG R++  M+ + +++  ++H  C+VDLLSR G L +A  FI          +W +LL 
Sbjct: 538 EEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLS 597

Query: 636 GCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
           GCRI+ ++   + VAE + EL+P  +  YVLL N+Y +A       K+RE +  RG++K 
Sbjct: 598 GCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKE 657

Query: 696 PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF-PKTRYALINADEME 754
           PG SWIE+  +V+ FV G  SHP ++ I   L+ +  + ++ GY   K +   I+  E++
Sbjct: 658 PGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEVK 717

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
             + +  HSEKLA++FGI++LP    ++V KNLRVC DCH   K +S   +REI+LRDS 
Sbjct: 718 GTLGVNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSL 777

Query: 815 RFHHFKDGRCSCRGFW 830
           RFHHFK+G CSC  +W
Sbjct: 778 RFHHFKEGSCSCNDYW 793



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 240/527 (45%), Gaps = 69/527 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVH--S 120
           +YN  I  +  +G   KA+ +   +  +  K+D  +Y  +L  C  +K    GK +H  +
Sbjct: 77  SYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLA 136

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           I+C  G  +    L + L+ M+  C  +   R +F   D      WN L+  Y++ G ++
Sbjct: 137 IVCGLGQQV---FLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYE 193

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKC--------------------------------- 207
           E L L  KM   G+  +++T    LK                                  
Sbjct: 194 EMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTA 253

Query: 208 -LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK-----GLEVFKEMLNL 261
            L +   +  + DA +LF    +++VV +N MI+G+I     +K      L++F +M   
Sbjct: 254 LLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQ 313

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G      T  +++  C +  A  +G+ +HA   K     +    +TL+++YS  G  +  
Sbjct: 314 GIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQ 373

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
           ++ F    +  +VSWT+MIAGYA+ G F+ A+ LF  ++  G +PD + IT++L ACA  
Sbjct: 374 LKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADV 433

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
                G+ VH Y  +  + +   V N+ + MYAK G++  A+  F ++   D+VSW+ MI
Sbjct: 434 AAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMI 493

Query: 442 ----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      A++LF  M      P+ +T   +L AC+    +E G       LR+  S
Sbjct: 494 CSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEG-------LRYYES 546

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
             ++    I   +  C V +L+R+   ++ AK+     I+ +G+G H
Sbjct: 547 MKKDYDMKINVKHCTCIVDLLSRA-GRLLDAKNF----ILNSGFGDH 588



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 189/392 (48%), Gaps = 20/392 (5%)

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
           F +D      ++   +  G+ + G+  HA  +K  F+  +   N  L++YSK G++  A 
Sbjct: 5   FPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQ 64

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
           ++F++M ERSV+S+  +I+GY   G +  AI LF       ++ D ++   +L AC    
Sbjct: 65  KLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIK 124

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI- 441
              +GK +H       +   ++++N L+DMY KC  +  A  +F      D VSWN++I 
Sbjct: 125 DFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLIT 184

Query: 442 -----GALDLFVAMLQNFEPDGV-----TMACILPAC-ASLAAL-ERGREIHGYILRHGI 489
                GA +  + +L      G+     T+   L +C  +L  +   G+ +HGY ++ G+
Sbjct: 185 GYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGL 244

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM-----HGFGCDAI 544
             D  V  A++DMY K G L  A  LF   P ++++ +  MIAG+            +A+
Sbjct: 245 DLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEAL 304

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
             F+ M++ GI+P + +F S++  C+H    + G +    +  + NI+      + +++L
Sbjct: 305 KLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHI-CKHNIQSDEFIGSTLIEL 363

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            S  G+  +  +     P   D   W +++ G
Sbjct: 364 YSLLGSTEDQLKCFNSTP-KLDIVSWTTMIAG 394



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 124/273 (45%), Gaps = 9/273 (3%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++   I  + + G  E A+ + Y   +   K D     ++L  CAD+ +   G++VH   
Sbjct: 387 SWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYA 446

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++GI     V  S+ + M+   G+L   +  F +I N  V  W++++   ++ G+ K++
Sbjct: 447 VKTGIGTLAIVQNSQ-ISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDA 505

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
           + LF+ M+S GI  +  TF   L  L    +   V++  + ++ +     +  N      
Sbjct: 506 INLFELMKSYGIHPNQITF---LGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTC 562

Query: 243 IANGVAEKG--LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           I + ++  G  L+    +LN GF        T+LSGC     ++ G+ V A  L     +
Sbjct: 563 IVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHV-AEKLIELDPQ 621

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           E S    L ++Y+  G    A ++ E M +R +
Sbjct: 622 ESSSYVLLYNIYTDAGIDLPATKIRELMKDRGI 654


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/719 (35%), Positives = 405/719 (56%), Gaps = 49/719 (6%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  IG +   G    A+ + ++   E   +   ++ ++L+ CA L+ +  G ++HS++ 
Sbjct: 150 WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV 209

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFIWNLLMHEYSKTGNFKES 182
           + G     G + + LV M+    DL   RR+F+   + G   +WN ++  YS +G   E+
Sbjct: 210 KLGYH-STGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 268

Query: 183 LYLFKKMQSLGIAADSYTF--------------------SCVLK----------CLAVVG 212
           L LF++M   G A +SYT                     + VLK          C A++ 
Sbjct: 269 LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIA 328

Query: 213 NSRR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
              R   +  A ++  ++++ DVV+WN +I GY+ N + ++ LE F +M+  G   D  +
Sbjct: 329 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 388

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           M ++++       L+ G  +HA+ +K  +   +   NTL+DMYSKC       R F +M 
Sbjct: 389 MTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH 448

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ++ ++SWT++IAGYA+      A+ LFR + ++ +E D   + SIL A +    + I K+
Sbjct: 449 DKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKE 508

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H +I    +  ++ + N L+D+Y KC +M  A  VF  +  KD+VSW +MI        
Sbjct: 509 IHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGN 567

Query: 443 ---ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              A++LF  M++     D V + CIL A ASL+AL +GREIH Y+LR G   + ++A A
Sbjct: 568 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA 627

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +VDMY  CG L  A+++FD I  K L+ +T MI  YGMHG G  A+  F+ MR   + PD
Sbjct: 628 VVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPD 687

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            +SF+++LYACSH+GL+DEG  F  +M +E  +EP  EHY C+VD+L R   + EA+ F+
Sbjct: 688 HISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV 747

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           +MM   P A +W +LL  CR H E ++ E  A+ + ELEP N G  VL++NV+AE  +W 
Sbjct: 748 KMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 807

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
           +V+K+R K+   G++K+PGCSWIE+ GKV+ F A   SHP +K+I   L  +  +++RE
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE 866



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 194/378 (51%), Gaps = 13/378 (3%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K + + G    + DA K+FDE+ DR   +WN MI  Y++NG     L ++  M   G  +
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
            L++   +L  CA    +  G  +H+  +K  +       N L+ MY+K  DL  A R+F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240

Query: 326 EKMGER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           +   E+   V W S+++ Y+  G     + LFR M   G  P+ Y I S L AC      
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300

Query: 385 EIGKDVH-DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           ++GK++H   +K +   S LYV NAL+ MY +CG M  AE +  QM   D+V+WN++I  
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360

Query: 443 ---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    AL+ F  M+    + D V+M  I+ A   L+ L  G E+H Y+++HG  ++
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             V N ++DMY KC +       F  +  KDLISWT +IAGY  +    +A+  F D+ +
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480

Query: 553 AGIEPDEVSFISVLYACS 570
             +E DE+   S+L A S
Sbjct: 481 KRMEIDEMILGSILRASS 498



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 171/352 (48%), Gaps = 25/352 (7%)

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF-NNTLLDM 311
           E F+ +     N  +     VL  C    A+  GR +H+   K   S E+ F    L+ M
Sbjct: 66  EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y KCG LD A +VF++M +R+  +W +MI  Y   G    A+ L+  M  EG+   + + 
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            ++L ACA    +  G ++H  + +    S+ ++ NAL+ MYAK   ++ A  +F+    
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245

Query: 432 K-DIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGRE 479
           K D V WN+++ +          L+LF  M +    P+  T+   L AC   +  + G+E
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305

Query: 480 IHGYILRHGI-SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           IH  +L+    S++  V NA++ MY +CG +  A  +   +   D+++W  +I GY  + 
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACS-----------HSGLVDEGW 579
              +A+  F+DM  AG + DEVS  S++ A             H+ ++  GW
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/719 (34%), Positives = 406/719 (56%), Gaps = 47/719 (6%)

Query: 66   YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
            +N  I  + + G+ E+ +      ++  I  D  +   +L +C  L     G+++H  I 
Sbjct: 515  WNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYII 574

Query: 124  ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN-GKVFIWNLLMHEYSKTGNFKES 182
             + +   D  L + L+ M+ +C    E   +F K++N   +  WN+++  + + G +++S
Sbjct: 575  RN-MFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKS 633

Query: 183  LYLFK--KMQSLGIAADSYT-------------FSCVLKC-----------------LAV 210
            L L+   K ++  + + S+T             F   + C                 L +
Sbjct: 634  LELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTM 693

Query: 211  VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
               S  V+DA K+FD++ D++V   N MIS +I NG A   L ++ +M      VD  T+
Sbjct: 694  YAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTI 753

Query: 271  VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             ++LSGC+  G+  FGR VHA  +K      ++  + LL MY KCG  + A  VF  M E
Sbjct: 754  SSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKE 813

Query: 331  RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
            R VV+W SMIAG+ +   F  A+ LFR M +EG++ D   +TS++ A      +E+G  +
Sbjct: 814  RDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLI 873

Query: 391  HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
            H +  +  ++S ++V+ +L+DMY+K G    AE VF+ MP K++V+WN+MI         
Sbjct: 874  HGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLP 933

Query: 443  --ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
              +++L   +LQ+ F  D V++  +L A +S+AAL +G+ +H Y +R  I +D  V NA+
Sbjct: 934  EMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENAL 993

Query: 500  VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
            +DMYVKCG L  A+ +F+ +P ++L++W  MIAGYG HG   +A+  F +M+++   PDE
Sbjct: 994  IDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDE 1053

Query: 560  VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            V+F++++ +CSHSG+V+EG   F +MR E  +EP++EHYA +VDLL R G L +AY FI 
Sbjct: 1054 VTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIR 1113

Query: 620  MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
             MP+  D ++W  LL  CR H  ++L E VA+++ ++EP     YV L N+Y E E W+ 
Sbjct: 1114 GMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDR 1173

Query: 680  VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
               LR  +  RGLKK+PGCSWIE+K +V++F +G SS     +I   L  L+  M+ +G
Sbjct: 1174 AANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG 1232



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 190/654 (29%), Positives = 317/654 (48%), Gaps = 56/654 (8%)

Query: 69   EIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICESG 126
            EI    + G   +A+E+   +  S + T   T+ S+L+ CA L +L  G+ +H+ I   G
Sbjct: 412  EIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMG 471

Query: 127  IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK-----VFIWNLLMHEYSKTGNFKE 181
            +   D  + + L+ M+V CG L    +VF+K+   +     + +WN ++  Y K G+F+E
Sbjct: 472  LQ-SDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEE 530

Query: 182  SLYLFKKMQSLGIAADSYTFSCVLKC-----------------------------LAVVG 212
             L  F +MQ LGI  D Y+ S VL                                A++G
Sbjct: 531  GLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIG 590

Query: 213  ---NSRRVKDAHKLFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
               +  R  +A  LF +L +R ++V+WN MI G++ NG+ EK LE++    N    +  A
Sbjct: 591  MYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSA 650

Query: 269  TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            +     + C++   L FGR VH   +K  F  +     +LL MY+K G ++ A +VF+++
Sbjct: 651  SFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQV 710

Query: 329  GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             ++ V    +MI+ +   G    A+ L+  M       D + I+S+L  C+  G  + G+
Sbjct: 711  LDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGR 770

Query: 389  DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
             VH  + +  MQS++ + +AL+ MY KCGS  DA+SVF  M  +D+V+W +MI       
Sbjct: 771  TVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNR 830

Query: 443  ----ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                ALDLF AM  +  + D   M  ++ A   L  +E G  IHG+ ++ G+ +D  VA 
Sbjct: 831  RFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVAC 890

Query: 498  AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
            ++VDMY K G    A  +F  +P K+L++W  MI+ Y  +G    +I     + Q G   
Sbjct: 891  SLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYL 950

Query: 558  DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
            D VS  +VL A S    + +G +  +  +    I   L+    ++D+  + G L  A   
Sbjct: 951  DSVSITTVLVAVSSVAALLKG-KTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLI 1009

Query: 618  IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV--FELEPDNTGYYVLLAN 669
             E MP   +   W S++ G   H   + A ++ + +   E  PD   +  L+ +
Sbjct: 1010 FENMP-RRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITS 1062


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 225/628 (35%), Positives = 362/628 (57%), Gaps = 13/628 (2%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           R   A  L     +R VV+W  +I+G + NG     L  F  M       +  T      
Sbjct: 57  RPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFK 116

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
              +  + + G+ VHA A+KA    ++    +  DMYSK G  + A ++F++M ER++ +
Sbjct: 117 ASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIAT 176

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W + ++    EG +D A+  F     EG EP++    + L+ACA    L +G+ +H ++ 
Sbjct: 177 WNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVL 236

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-----------GAL 444
           ++  ++ + V+N L+D Y KC  +  +E +F+ +   + VSW +MI             L
Sbjct: 237 QSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACL 296

Query: 445 DLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
               A  +  EP    ++ +L ACA L+ LE G+ +H   ++  +  +  V +A+VDMY 
Sbjct: 297 VFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYG 356

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG--IEPDEVSF 562
           KCG +  A   FD +P ++L++W  MI GY   G    A+  F++M      + P+ V+F
Sbjct: 357 KCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTF 416

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           + VL ACS +G V+ G   F  MR    IEP  EHYAC+VDLL R G + +AY+FI+ MP
Sbjct: 417 VCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMP 476

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + P  ++WG+LL   ++  + +L +  A+++FEL+P ++G +VLL+N++A A +WEE   
Sbjct: 477 IRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATL 536

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R+++   G+KK  GCSWI     V++F A  +SH    +I+++L +LR EM+  GY P 
Sbjct: 537 VRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPD 596

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           T +AL + +E EK + +  HSEK+A+AFG++++PAG  IR+TKNLR+CGDCH   KF+S 
Sbjct: 597 TSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISG 656

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REI++RD+N FH F+D +CSCR +W
Sbjct: 657 IVGREIIVRDNNLFHRFRDNQCSCRDYW 684



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 176/364 (48%), Gaps = 14/364 (3%)

Query: 285 FGRAVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
            GRA HA  +K   +   SF  N L++MYSK    + A  +      RSVV+WT++IAG 
Sbjct: 24  LGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGS 83

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
            + G F  A+  F  M R+ I+P+ +       A        +GK VH    +    S +
Sbjct: 84  VQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-Q 452
           +V  +  DMY+K G   +A  +F++MP ++I +WN  +           AL  F+    +
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHE 203

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
            +EP+ +T    L ACA  + L  GR++HG++L+ G  AD +VAN ++D Y KC  +  +
Sbjct: 204 GWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCS 263

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +F  I   + +SW  MI  Y  +     A   F   R+ GIEP +    SVL AC+  
Sbjct: 264 EIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGL 323

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
            +++ G     +    C +       A +VD+  + G++ +A R  + MP   +   W +
Sbjct: 324 SVLEVGKSVHTLAVKACVVGNIFVGSA-LVDMYGKCGSIEDAERAFDEMP-ERNLVTWNA 381

Query: 633 LLCG 636
           ++ G
Sbjct: 382 MIGG 385



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 170/386 (44%), Gaps = 37/386 (9%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+    +    L+S   GK+VH++  ++G  I D  +G     M+   G  +E R++F++
Sbjct: 110 TFPCAFKASGSLRSPLVGKQVHALAVKAG-QISDVFVGCSAFDMYSKAGLTEEARKMFDE 168

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------- 209
           +    +  WN  +      G + ++L  F + +  G   +  TF   L   A        
Sbjct: 169 MPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLG 228

Query: 210 ------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                                     G   +V  +  +F  +S  + VSW  MI  Y+ N
Sbjct: 229 RQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQN 288

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
              EK   VF      G       + +VLS CA    L  G++VH  A+KAC    I   
Sbjct: 289 DEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVG 348

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV--REG 363
           + L+DMY KCG ++ A R F++M ER++V+W +MI GYA +G  D A+ LF  M      
Sbjct: 349 SALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHR 408

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADA 422
           + P+      +L AC+  G + +G ++ + ++    ++        ++D+  + G +  A
Sbjct: 409 VAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQA 468

Query: 423 ESVFNQMPVKDIVS-WNTMIGALDLF 447
                +MP++  VS W  ++GA  +F
Sbjct: 469 YQFIKKMPIRPTVSVWGALLGASKMF 494



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 172/432 (39%), Gaps = 93/432 (21%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+C+ L  CA    L  G+++H  + +SG   D  V  + L+  +  C  +     +F+ 
Sbjct: 211 TFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSV-ANGLIDFYGKCHQVGCSEIIFSG 269

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------- 209
           I       W  ++  Y +    +++  +F + +  GI    +  S VL   A        
Sbjct: 270 ISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVG 329

Query: 210 -----------VVGN-------------SRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                      VVGN                ++DA + FDE+ +R++V+WN MI GY   
Sbjct: 330 KSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQ 389

Query: 246 GVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
           G A+  + +F EM      V  +  T V VLS C+  G++  G  +   +++  +  E  
Sbjct: 390 GQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFE-SMRGRYGIEPG 448

Query: 304 FNN--TLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAGYAREGVFDGAIRLFRGMV 360
             +   ++D+  + G ++ A +  +KM  R  VS W +++          GA ++F    
Sbjct: 449 AEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALL----------GASKMF---- 494

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND-MQSSLYVSNALMDMYAKCGSM 419
                                G  E+GK   D + E D + S  +V   L +M+A  G  
Sbjct: 495 ---------------------GKSELGKVAADNLFELDPLDSGNHV--LLSNMFAAAGRW 531

Query: 420 ADAESVFNQMPVKDI-------VSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLA 472
            +A  V  +M  KD+        SW T   A+ +F A   + E +    A        LA
Sbjct: 532 EEATLVRKEM--KDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAM-------LA 582

Query: 473 ALERGREIHGYI 484
            L    E  GYI
Sbjct: 583 KLRGEMEAAGYI 594



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 13/188 (6%)

Query: 80  EKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
           EKA  V   + K  I+   +   S+L  CA L  LE GK VH++  ++  V+ +  +GS 
Sbjct: 292 EKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKA-CVVGNIFVGSA 350

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ--SLGIA 195
           LV M+  CG +++  R F+++    +  WN ++  Y+  G    ++ LF +M   S  +A
Sbjct: 351 LVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVA 410

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEK 250
            +  TF CVL   +  G+   V    ++F+ +  R  +      + C++      G+ E+
Sbjct: 411 PNYVTFVCVLSACSRAGS---VNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQ 467

Query: 251 GLEVFKEM 258
             +  K+M
Sbjct: 468 AYQFIKKM 475


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/665 (37%), Positives = 385/665 (57%), Gaps = 47/665 (7%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           ++D  T+  +L+ CAD  S++ G+++H ++ + G    D  +G+ L+  +  CG LK+ +
Sbjct: 4   RLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGF-DSDVFVGNTLLLFYGNCGGLKDVK 62

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ---------------------- 190
           RVF+++    V  WN ++  +S  G + E+++LF +M                       
Sbjct: 63  RVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGL 122

Query: 191 ---SLGIAADSYTFSCVLKCLAVVGNSR--------RVKDAHKLFDELSDRDVVSWNCMI 239
                G     Y     L     VGN+          VKD+ ++FDE+S+R+ VSWN +I
Sbjct: 123 EDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAII 182

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           +        +  LE+F+ M++ G   +  T  ++L          FG+ +H F+L+    
Sbjct: 183 TSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLE 242

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +I   N L+DMY+K G    A  VF ++GE+++VSW +M+A +A+  +   A+ L R M
Sbjct: 243 SDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQM 302

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             +G  P+    T++L ACA  G L  GK++H           L+VSNAL DMYAKCG +
Sbjct: 303 QADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCL 362

Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPAC 468
             A  VF ++ ++D VS+N +I           +L LF+ M ++  + D V+   ++ AC
Sbjct: 363 NLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISAC 421

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A+LAAL++G+E+HG  +R  +     +ANA++D Y+KCG + LA  +F  IP++D  SW 
Sbjct: 422 ANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWN 481

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI GYGM G    AI  F  M++ G+E D VS+I+VL ACSH GLV+EG ++F  M+ +
Sbjct: 482 SMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQ 541

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
            NI+P   HYACMVDLL R G + EA + IE +P+ PDA +WG+LL  CRIH  ++LA  
Sbjct: 542 -NIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHW 600

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            AEH+F+L+P ++GYY +L+N+YAEA KW+E  ++R+ +  RG KKNPGCSW++I  +V+
Sbjct: 601 AAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVH 660

Query: 709 IFVAG 713
            FVAG
Sbjct: 661 AFVAG 665



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 184/332 (55%), Gaps = 16/332 (4%)

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
           +G  +D  T   VL  CA+  ++  GR +H    K  F  ++   NTLL  Y  CG L  
Sbjct: 1   MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGIEPDVYAITSILHACA 379
             RVF++M ER VVSW S+I  ++  G +  AI LF  M +R G  P++ +I S+L  CA
Sbjct: 61  VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120

Query: 380 C--DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
              DG+   G+ +H Y+ +  + S + V NAL+D+Y KCG + D+  VF+++  ++ VSW
Sbjct: 121 GLEDGV--TGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSW 178

Query: 438 NTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR 486
           N +I           AL++F  M+    +P+ VT + +LP    L   + G+EIHG+ LR
Sbjct: 179 NAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR 238

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
            G+ +D  VANA++DMY K G  + A ++F+ I  K+++SW  M+A +  +     A+  
Sbjct: 239 FGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDL 298

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
              M+  G  P+ V+F +VL AC+  G +  G
Sbjct: 299 VRQMQADGEIPNSVTFTNVLPACARIGFLRPG 330


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/610 (38%), Positives = 351/610 (57%), Gaps = 13/610 (2%)

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           + +WN +++     G     L VF+ + +     D  T    L+ CA  G L    AV  
Sbjct: 77  IPAWNALLAARSRAGSPGAALRVFRALPS-SARPDSTTFTLALTACARLGDLDAAEAVRV 135

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
            A  A + +++   + LL +YS+CG +  AIRVF+ M  +  V+W++M+AG+   G    
Sbjct: 136 RAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVE 195

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           A+ ++  M   G+  D   +  ++ AC   G   +G  VH     + M+  + ++ +L+D
Sbjct: 196 ALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVD 255

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVT 460
           MYAK G    A  VF  MP ++ VSWN +I           ALDLF  M     +PD   
Sbjct: 256 MYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGA 315

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           +   L ACA +  L+ G+ IHG+ILR  +     +  A++DMY KCG L  AR LF+ + 
Sbjct: 316 LVSALLACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLS 374

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
           ++DL+ W  MIA  G HG G DA+A F ++ + GI+PD  +F S+L A SHSGLV+EG  
Sbjct: 375 SRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKF 434

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           +F+ M  E  IEP  +H  C+VDLL+R+G + EA   +  M   P   IW +LL GC  +
Sbjct: 435 WFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNN 494

Query: 641 HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSW 700
            +++L E +A+ + E +P++ G   L++N+YA A+KW++V+++R+ +   G KK PG S 
Sbjct: 495 KKLELGETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSL 554

Query: 701 IEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALC 760
           IE+ G  + FV    SHP  ++I  ++ +L  EM++ GY P+T +   + DE  KE  L 
Sbjct: 555 IEVHGTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLS 614

Query: 761 GHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFK 820
            HSE+LA+AFG+LN   G  + + KNLRVCGDCH+  K++SK   REIV+RD+ RFHHFK
Sbjct: 615 YHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFK 674

Query: 821 DGRCSCRGFW 830
           DG CSC  +W
Sbjct: 675 DGACSCGDYW 684



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 198/413 (47%), Gaps = 47/413 (11%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----SRRVK-- 218
           WN L+   S+ G+   +L +F+ + S     DS TF+  L   A +G+     + RV+  
Sbjct: 80  WNALLAARSRAGSPGAALRVFRALPS-SARPDSTTFTLALTACARLGDLDAAEAVRVRAF 138

Query: 219 -------------------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
                                    DA ++FD +  +D V+W+ M++G+++ G   + L 
Sbjct: 139 AAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALG 198

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           ++  M   G   D   MV V+  C   G    G +VH   L+     ++    +L+DMY+
Sbjct: 199 MYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYA 258

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
           K G  D A +VF  M  R+ VSW ++I+G+A+ G  D A+ LFR M   G++PD  A+ S
Sbjct: 259 KNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVS 318

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD 433
            L ACA  G L++GK +H +I    ++    +  A++DMY+KCGS+  A  +FN++  +D
Sbjct: 319 ALLACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRD 377

Query: 434 IVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGR-EIH 481
           +V WN MI           AL LF  + +   +PD  T A +L A +    +E G+    
Sbjct: 378 LVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 437

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAG 533
             I   GI         +VD+  + G++  A  +   +  +  I  W  +++G
Sbjct: 438 RMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSG 490



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 187/411 (45%), Gaps = 37/411 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKS-KIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           +NA +      G+   A+ V  +   S + D+ T+   L  CA L  L+  + V      
Sbjct: 80  WNALLAARSRAGSPGAALRVFRALPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFA 139

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
           +G   D  V  S L+ ++  CG + +  RVF+ +       W+ ++  +   G   E+L 
Sbjct: 140 AGYGRDVFVC-SALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALG 198

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH----------------------- 221
           ++ +M+  G+A D      V++   + GN+R     H                       
Sbjct: 199 MYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYA 258

Query: 222 ---------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
                    ++F  +  R+ VSWN +ISG+  NG A++ L++F+EM   G   D   +V+
Sbjct: 259 KNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVS 318

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
            L  CA+ G L  G+++H F L+     +      +LDMYSKCG L+ A ++F K+  R 
Sbjct: 319 ALLACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRD 377

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           +V W +MIA     G    A+ LF+ +   GI+PD     S+L A +  GL+E GK   D
Sbjct: 378 LVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 437

Query: 393 -YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMI 441
             I E  ++ +      ++D+ A+ G + +A  +   M  +  +  W  ++
Sbjct: 438 RMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALL 488



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 123/285 (43%), Gaps = 42/285 (14%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D      ++Q C    +   G  VH      G+ +D  V+ + LV M+   G     R+V
Sbjct: 211 DEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDV-VIATSLVDMYAKNGHFDVARQV 269

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKCLAV--- 210
           F  +       WN L+  +++ G+  E+L LF++M + G+  DS    S +L C  V   
Sbjct: 270 FRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFL 329

Query: 211 -VGNS------RR--------------------VKDAHKLFDELSDRDVVSWNCMISGYI 243
            +G S      RR                    ++ A KLF++LS RD+V WN MI+   
Sbjct: 330 KLGKSIHGFILRRLEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCG 389

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVL-----SGCANCGALMFGRAVHAFALKACF 298
            +G     L +F+E+   G   D AT  ++L     SG    G   F R +  F ++   
Sbjct: 390 THGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTE 449

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAG 342
              +     ++D+ ++ G ++ A  +   M  E ++  W ++++G
Sbjct: 450 KHCV----CVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSG 490



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 112/235 (47%), Gaps = 21/235 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  F + G+ ++A+++      S +  D+    S L  CAD+  L+ GK +H  I
Sbjct: 280 SWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFI 339

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
                +    +LG+ ++ M+  CG L+  R++FNK+ +  + +WN ++      G   ++
Sbjct: 340 LRR--LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDA 397

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD--------ELSDRDVVS 234
           L LF+++   GI  D  TF+ +L  L+   +S  V++    FD        E +++  V 
Sbjct: 398 LALFQELNETGIKPDHATFASLLSALS---HSGLVEEGKFWFDRMITEFGIEPTEKHCV- 453

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
             C++     +G+ E+  E+   M        +   V +LSGC N   L  G  +
Sbjct: 454 --CVVDLLARSGLVEEANEMLASMHT---EPTIPIWVALLSGCLNNKKLELGETI 503


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/782 (32%), Positives = 413/782 (52%), Gaps = 53/782 (6%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIV----IDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           +IL  C+DL++L +GK+VH ++    ++     D+ +L + ++ M++ CG       VF+
Sbjct: 15  AILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFD 74

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---------- 206
           ++ +  V  W  L+  ++  G+F +++ LF+KM   G++ D  TF+ +L           
Sbjct: 75  RMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLD 134

Query: 207 -----------------------CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                   + + G    V+ A  +FD + D +V SW  +I+ Y 
Sbjct: 135 EGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYA 194

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC-FSKEI 302
            NG   + L +   M   G   D  T  TVL  C   GAL   + +HA  + +    ++ 
Sbjct: 195 QNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDA 254

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
           +    L+++Y KCG L+ A  VF ++  + +VSW+SMIA +A+ G    AI+L   M  E
Sbjct: 255 AVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLE 314

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G+ P+     ++L A       + GK++H  I +      + +++AL+ MY   G +  A
Sbjct: 315 GVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETA 374

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
            S+F     +D+VSW++MI           AL LF  M +   +P+ VT    + ACA +
Sbjct: 375 RSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGV 434

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            AL RG ++H  +   G+  D  VA A+V++Y KCG L  A ++F  +  K+L++WT + 
Sbjct: 435 GALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIA 494

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
             YG +G G  ++   + M   G++PD + F+++L +C+++G + +G  ++N+M  +  I
Sbjct: 495 MAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGI 554

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P +EH  CMVD+L R G L  A + I  M     +  W  LL  C+ H++   A + AE
Sbjct: 555 APAVEHCGCMVDILGRAGKLEAAEQLINTMKF-ESSLAWMMLLTACKAHNDTARAARAAE 613

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            +F+LEP N   YVLL++V+  A  WE  ++ R ++  RG+++  G S IEI  +V+ FV
Sbjct: 614 KIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFV 673

Query: 712 AGGSSHPH--AKKIESLLKRLRLEMKREGYFPK-TRYALINADEMEKEVALCGHSEKLAM 768
           A     PH    +I + L++L  EM+  GY P  T   L + +E  KE A+  HSE LA+
Sbjct: 674 AASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEMLAL 733

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
             GI++ PAG  +R+TKNLR+C DCH   KF+SK   R I +RD  R HHF++G CSC  
Sbjct: 734 GLGIISTPAGTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCSCGD 793

Query: 829 FW 830
           +W
Sbjct: 794 YW 795



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 255/525 (48%), Gaps = 59/525 (11%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSIL-QLCADLKSLEDGKKVHSII 122
           + + I  F   G+   AM +      S +  D  T+ SIL +     ++L++GK+VHS I
Sbjct: 84  WTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHI 143

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G   D  V+ + +V M+  CGD+++   VF+ I +  VF W +++  Y++ G+  E 
Sbjct: 144 MQTGYEGDRMVM-NLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEV 202

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK------------------------ 218
           L L  +M   G+  D YTF+ VL     VG     K                        
Sbjct: 203 LRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALIN 262

Query: 219 ---------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                    +A  +F ++ ++D+VSW+ MI+ +  +G A+  +++   M   G   +  T
Sbjct: 263 LYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVT 322

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V VL    +  A  +G+ +HA  ++A +S ++   + L+ MY   G ++ A  +FE   
Sbjct: 323 FVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSR 382

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ER VVSW+SMIAGY++      A+ LFR M  +G++P+     S + ACA  G L  G  
Sbjct: 383 ERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQ 442

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA------ 443
           +H+ ++   +   + V+ AL+++Y KCG + +AE+VF  M  K++++W ++  A      
Sbjct: 443 LHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGH 502

Query: 444 ----LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
               L L   M LQ  +PDG+    IL +C     + +G  +H Y L   ++ D  +A A
Sbjct: 503 GSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKG--LHYYNL---MTQDFGIAPA 557

Query: 499 I------VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           +      VD+  + G L  A  L + +  +  ++W +++     H
Sbjct: 558 VEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTACKAH 602



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 230/493 (46%), Gaps = 57/493 (11%)

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK-----EISFNNTLLDMYSKCGD 317
              +++    +L+ C++  AL  G+ VH   ++    +     E    N ++ MY +CG 
Sbjct: 6   IQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGC 65

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
            D A+ VF++M +++VV+WTS+I+ +   G F  A+ LFR M+  G+ PD    TSIL  
Sbjct: 66  TDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLK 125

Query: 378 CAC-DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
            +  +  L+ GK VH +I +   +    V N +++MY KCG +  A +VF+ +   ++ S
Sbjct: 126 WSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFS 185

Query: 437 WNTMIGA----------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIH-GYI 484
           W  +I A          L L   M Q   +PDG T   +L AC ++ ALE  + +H   I
Sbjct: 186 WTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATI 245

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
              G+  D  V  A++++Y KCG L  A  +F  I  KD++SW+ MIA +   G    AI
Sbjct: 246 SSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAI 305

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACS-----------HSGLVDEG--------------- 578
                M   G+ P+ V+F++VL A +           H+ +V  G               
Sbjct: 306 QLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMY 365

Query: 579 --WRFFNMMR--YECNIEPKLEHYACMVDLLSRTGNLSEA---YRFIEMMPVAPDATIWG 631
             W +    R  +E + E  +  ++ M+   S+  + + A   +R +E+  V P++  + 
Sbjct: 366 CNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFV 425

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELEPD-NTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
           S +  C     ++   ++ E V  L  D +      L N+Y +  + EE + +       
Sbjct: 426 SAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAV-----FL 480

Query: 691 GLKKNPGCSWIEI 703
           G+KK    +W  I
Sbjct: 481 GMKKKNLLTWTSI 493



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/313 (20%), Positives = 135/313 (43%), Gaps = 40/313 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++++ I  F + G  + A+++L     E  + +  T+ ++L+    LK+ + GK++H+ I
Sbjct: 287 SWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARI 346

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G   DD  L S LV M+   G ++  R +F       V  W+ ++  YS+  +   +
Sbjct: 347 VQAGYS-DDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARA 405

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR--------------------------- 215
           L LF++M+  G+  +S TF   +   A VG  R                           
Sbjct: 406 LSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNL 465

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R+++A  +F  +  +++++W  +   Y  NG   + L++   M   G   D    
Sbjct: 466 YGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVF 525

Query: 271 VTVLSGCANCGALMFGRAVHAFALKA---CFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           V +L  C   G +   + +H + L       +  +     ++D+  + G L+ A ++   
Sbjct: 526 VAILVSCNYAGQM--SKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINT 583

Query: 328 MGERSVVSWTSMI 340
           M   S ++W  ++
Sbjct: 584 MKFESSLAWMMLL 596


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/716 (35%), Positives = 387/716 (54%), Gaps = 42/716 (5%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G L++G+ V       +  ++  L+H   + G    +  L   M   G AAD +  + ++
Sbjct: 66  GMLRDGQTV-------QSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLV 118

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                  +SR   DA +LFD + D++VV+W  +I+G+  N      LEVF EML LG   
Sbjct: 119 NVYMRCASSR---DARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYP 175

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
              T+  +LS C+    +  G+ VH +++K       S  N+L  +Y K GDL+  +R F
Sbjct: 176 SHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAF 235

Query: 326 EKMGERSVVSWTSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           +   +++V++WT+MI+  A  E   D  + LF  M+  G+ P+ + +TS++  C     +
Sbjct: 236 KGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDM 295

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
            +GK V  +  +   +++L V N+ M +Y + G   +A  +F +M    I++WN MI   
Sbjct: 296 SLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGY 355

Query: 443 -------------------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHG 482
                              AL LF  ++++  +PD  T + IL  C+++ ALE+G +IH 
Sbjct: 356 AQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHA 415

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
             ++ G  +D  V +A+V+MY KCG +  A   F  +P +  ++WT MI+GY  HG   D
Sbjct: 416 NTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQD 475

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
           AI  F DM  +G  P+E++F+S+L ACS++GLV+E  R+F+MMR E +IEP ++HY CMV
Sbjct: 476 AIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMV 535

Query: 603 DLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTG 662
           D+  R G L +A+ FI+     P+  IW SL+ GCR H  ++LA   A+ + EL+P    
Sbjct: 536 DMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIE 595

Query: 663 YYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKK 722
            YVLL N+Y    +W +V ++R+      +      SWI I+ KV  F A   +HP A +
Sbjct: 596 TYVLLLNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATE 655

Query: 723 IESLLKRLRLEMKREGYFPKTRYALINADEME----KEVALCG-----HSEKLAMAFGIL 773
           +  LL+ L  + K  GY P      +  D  E    K  A  G     HSE+LA+A G+L
Sbjct: 656 LYQLLENLLEKAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLL 715

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
             P G T+RVTKN+ +C DCH   K+ S  A REIV+RDS R H FKDGRCSC  F
Sbjct: 716 ETPPGATVRVTKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 185/395 (46%), Gaps = 55/395 (13%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV--LGSKLVFMFVTCGDLKEGRRVF 155
           T   +L  C+  + ++ G++VH    + G    D +  +G+ L  ++   GDL+ G R F
Sbjct: 179 TLGGMLSACSAARRIDLGQQVHGYSIKYGA---DTITSMGNSLCRLYCKSGDLESGLRAF 235

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKE-SLYLFKKMQSLGIAADSYTFSCVLK-------- 206
               +  V  W  ++   ++  N+ +  L LF  M   G+  + +T + V+         
Sbjct: 236 KGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDM 295

Query: 207 ---------CLAV-------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGY 242
                    C  V       V NS            +A +LF+E+    +++WN MISGY
Sbjct: 296 SLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGY 355

Query: 243 I-----------ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
                       A     + L++F++++      DL T  ++LS C+   AL  G  +HA
Sbjct: 356 AQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHA 415

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
             +K     ++  N+ L++MY+KCG ++ A + F +M  R+ V+WTSMI+GY++ G    
Sbjct: 416 NTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQD 475

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALM 410
           AI+LF  MV  G  P+     S+L AC+  GL+E  +   D ++ E  ++  +     ++
Sbjct: 476 AIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMV 535

Query: 411 DMYAKCGSMADAESVFNQM---PVKDIVSWNTMIG 442
           DM+ + G + DA S   +    P + I  W++++ 
Sbjct: 536 DMFVRLGRLDDAFSFIKRTGFEPNEAI--WSSLVA 568



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 137/314 (43%), Gaps = 62/314 (19%)

Query: 98  TYCSILQLCADLKSLEDGKKVHS----IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           T  S++ LC     +  GK+V +    + CE+ + + +  +     ++++  G+  E  R
Sbjct: 281 TLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTM-----YLYLRKGETDEAMR 335

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFK-----------ESLYLFKKMQSLGIAADSYTFS 202
           +F ++D+  +  WN ++  Y++  +             ++L LF+ +    +  D +TFS
Sbjct: 336 LFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFS 395

Query: 203 CVLK----------------------CLA-VVGNSR---------RVKDAHKLFDELSDR 230
            +L                       CL+ VV NS           ++ A K F E+  R
Sbjct: 396 SILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTR 455

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
             V+W  MISGY  +G ++  +++F++M+  G   +  T V++LS C+  G  +   A  
Sbjct: 456 TPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAG--LVEEAER 513

Query: 291 AFAL---KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYARE 346
            F +   +      +     ++DM+ + G LD A    ++ G E +   W+S++AG    
Sbjct: 514 YFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSH 573

Query: 347 G----VFDGAIRLF 356
           G     F  A RL 
Sbjct: 574 GNMELAFYAADRLL 587



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 17/239 (7%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T+ SIL +C+ + +LE G+++H+   ++G  + D V+ S LV M+  CG ++   
Sbjct: 388 KPDLFTFSSILSVCSAMMALEQGEQIHANTIKTG-CLSDVVVNSALVNMYNKCGSIECAT 446

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           + F ++       W  ++  YS+ G  ++++ LF+ M   G   +  TF  +L   +  G
Sbjct: 447 KAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAG 506

Query: 213 NSRRVKDAHKLFDELSDRD-----VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
               V++A + FD + +       V  + CM+  ++  G  +      K     GF  + 
Sbjct: 507 ---LVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRT---GFEPNE 560

Query: 268 ATMVTVLSGCANCG--ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           A   ++++GC + G   L F  A     LK    K I     LL+MY   G      RV
Sbjct: 561 AIWSSLVAGCRSHGNMELAFYAADRLLELKP---KVIETYVLLLNMYISTGRWRDVARV 616


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/660 (35%), Positives = 378/660 (57%), Gaps = 17/660 (2%)

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
           +L   +  LG  ++++  + ++   +V G+   V  A  +F+ +  +D+V W  ++S Y+
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGS---VDSARSVFEGILCKDIVVWAGIVSCYV 223

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            NG  E  L++   M   GF  +  T  T L      GA  F ++VH   LK C+  +  
Sbjct: 224 ENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPR 283

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               LL +Y++ GD+  A +VF +M +  VV W+ MIA + + G  + A+ +F  M REG
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRM-REG 342

Query: 364 -IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
            + P+ + ++SIL+ CA      +G+ +H  + +      +YVSNAL+D+YAKC  M  A
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTA 402

Query: 423 ESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASL 471
             +F ++  K++VSWNT+I           AL++F   L+N      VT +  L ACASL
Sbjct: 403 VKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASL 462

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           A++E G ++HG  ++   +    V+N+++DMY KCG + +A+++F+ +   D+ SW  +I
Sbjct: 463 ASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALI 522

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           +GY  HG G  A+  F+ M+ +  +P+ ++F+ VL  CS++GL+D+G   F  M  +  I
Sbjct: 523 SGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGI 582

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
           EP LEHY CMV L  R+G L +A   IE +P  P   IW ++L      +  + A + AE
Sbjct: 583 EPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAE 642

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            + ++ P +   YVLL+N+YA A++W  V  +R+ +  +G+KK PG SWIE +G V+ F 
Sbjct: 643 EILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFS 702

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFG 771
            G S HP  K I  +L+ L ++  R GY P     L++ D+ EK+  L  HSE+LA+A+G
Sbjct: 703 VGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYG 762

Query: 772 ILNLPAGQT-IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           ++ +P+ +  I + KNLR+C DCH   K +S   +R++V+RD NRFHHF  G CSC   W
Sbjct: 763 LVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 237/497 (47%), Gaps = 51/497 (10%)

Query: 86  LYSS---EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
           LYS    E  +++   + S L+L   L   E    +HS I + G    +  +G+ L+  +
Sbjct: 133 LYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLG-YDSNAFVGAALINAY 191

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
             CG +   R VF  I    + +W  ++  Y + G F++SL L  +M   G   ++YTF 
Sbjct: 192 SVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFD 251

Query: 203 CVLKCLAVVGNSRRVK--------------------------------DAHKLFDELSDR 230
             LK    +G     K                                DA K+F+E+   
Sbjct: 252 TALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN 311

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGRAV 289
           DVV W+ MI+ +  NG   K +++F  M   GF V +  T+ ++L+GCA       G  +
Sbjct: 312 DVVPWSFMIARFCQNGFCNKAVDIFIRMRE-GFVVPNEFTLSSILNGCAIGKCSGLGEQL 370

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H   +K  F  ++  +N L+D+Y+KC  +D A+++F ++  ++VVSW ++I GY   G  
Sbjct: 371 HGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEG 430

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             A+ +FR  +R  +       +S L ACA    +E+G  VH    + +    + VSN+L
Sbjct: 431 GKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSL 490

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDG 458
           +DMYAKCG +  A++VFN+M   D+ SWN +I           AL +F  M   + +P+G
Sbjct: 491 IDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNG 550

Query: 459 VTMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
           +T   +L  C++   +++G++     I  HGI         +V ++ + G L  A +L +
Sbjct: 551 LTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIE 610

Query: 518 MIPAK-DLISWTIMIAG 533
            IP +  ++ W  M++ 
Sbjct: 611 GIPYEPSVMIWRAMLSA 627



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 205/435 (47%), Gaps = 19/435 (4%)

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           KDA  LFDE+ +R+ VS+  +  GY      +  + ++  +   G  ++     + L   
Sbjct: 101 KDALNLFDEMPERNNVSYVTLTQGY----ACQDPVGLYSRLHREGHELNPHVFTSFLKLF 156

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
            +         +H+  +K  +         L++ YS CG +D A  VFE +  + +V W 
Sbjct: 157 VSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWA 216

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
            +++ Y   G F+ +++L   M  +G  P+ Y   + L A    G     K VH  I + 
Sbjct: 217 GIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKT 276

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
             +    V   L+ +Y + G M+DA  VFN+MP  D+V W+ MI           A+D+F
Sbjct: 277 CYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIF 336

Query: 448 VAMLQNF-EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
           + M + F  P+  T++ IL  CA       G ++HG +++ G   D  V+NA++D+Y KC
Sbjct: 337 IRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKC 396

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             +  A  LF  + +K+++SW  +I GY   G G  A+  F +  +  +   EV+F S L
Sbjct: 397 EKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSAL 456

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEMMPVAP 625
            AC+    ++ G +   +   + N   ++     ++D+ ++ G++  A   F EM  +  
Sbjct: 457 GACASLASMELGVQVHGLA-IKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETI-- 513

Query: 626 DATIWGSLLCGCRIH 640
           D   W +L+ G   H
Sbjct: 514 DVASWNALISGYSTH 528



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 15/310 (4%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           T+L  C      +  +A+H   LK     ++   N LL+ Y K G    A+ +F++M ER
Sbjct: 54  TMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER 113

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           + VS+ ++  GYA +      + L+  + REG E + +  TS L         EI   +H
Sbjct: 114 NNVSYVTLTQGYACQD----PVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLH 169

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
             I +    S+ +V  AL++ Y+ CGS+  A SVF  +  KDIV W  ++          
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFE 229

Query: 443 -ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            +L L   M +  F P+  T    L A   L A    + +HG IL+     D  V   ++
Sbjct: 230 DSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLL 289

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
            +Y + G +  A  +F+ +P  D++ W+ MIA +  +GF   A+  F  MR+  + P+E 
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEF 349

Query: 561 SFISVLYACS 570
           +  S+L  C+
Sbjct: 350 TLSSILNGCA 359



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 153/369 (41%), Gaps = 45/369 (12%)

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D +A  ++L  C         K +H  I +      L+ +N L++ Y K G   DA ++F
Sbjct: 48  DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107

Query: 427 NQMPVKDIVSWNTMIG--ALDLFVAMLQNFEPDGVTM-----ACILPACASLAALERGRE 479
           ++MP ++ VS+ T+    A    V +      +G  +        L    SL   E    
Sbjct: 108 DEMPERNNVSYVTLTQGYACQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWW 167

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +H  I++ G  ++  V  A+++ Y  CG +  ARS+F+ I  KD++ W  +++ Y  +G 
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGC 227

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC-NIEPKLEHY 598
             D++   + M   G  P+  +F + L A    G           +   C  ++P++   
Sbjct: 228 FEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVG-- 285

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMP----------------------------------VA 624
             ++ L ++ G++S+A++    MP                                  V 
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVV 345

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV-LLANVYAEAEKWEEVKKL 683
           P+     S+L GC I     L E++   V ++  D   Y    L +VYA+ EK +   KL
Sbjct: 346 PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKL 405

Query: 684 REKISRRGL 692
             ++S + +
Sbjct: 406 FAELSSKNV 414


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/573 (40%), Positives = 347/573 (60%), Gaps = 14/573 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           T+L  C    A+  GR +HA  L +    +      L+D+Y+ CG +  A R+F++M  +
Sbjct: 68  TILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQ 127

Query: 332 -SVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKD 389
            +V  W  +I  YAR+G  + AI L+R M+  G +EPD +    +L ACA    L  G++
Sbjct: 128 GNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGRE 187

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL--- 446
           VHD +      + ++V   L+DMYAKCG + +A +VF+   V+D V WN+MI A      
Sbjct: 188 VHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGR 247

Query: 447 ---FVAMLQNFEPDG-----VTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
               +A+ +N   +G     VT+   + A A   AL RGRE+HGY  R G  +   +  +
Sbjct: 248 PAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTS 307

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR-QAGIEP 557
           ++DMY K G + +AR LFD +  ++LISW  MI G+GMHG    A   F  MR +A + P
Sbjct: 308 LLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMP 367

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           D ++F+ VL AC+H G+V E    F++M    +I+P ++HY C+VD+L  +G   EA   
Sbjct: 368 DHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDV 427

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           I+ M V PD+ IWG+LL GC+IH  V+LAE     + ELEP++ G YVLL+N+YA++ KW
Sbjct: 428 IKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKW 487

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
           EE  ++R+ ++ RGLKK   CSWIE+KGK + F+ G +SHP + +I   L+RL   + + 
Sbjct: 488 EEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLEGLISQT 547

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           GY P T     N ++ EK   + GHSE+LA+AFG+++ P G  + VTKNLRVC DCH + 
Sbjct: 548 GYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVI 607

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K +S+  +REI++RD NR+HHF +G CSC+  W
Sbjct: 608 KLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 189/384 (49%), Gaps = 38/384 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           +   Y +IL+ C   +++  G+++H+ +  SG+ +D  VL ++LV ++ +CG +   RR+
Sbjct: 62  NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLD-AVLATRLVDLYASCGLVSVARRL 120

Query: 155 FNKIDN-GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAV-- 210
           F+++ N G VF+WN+L+  Y++ G  + ++ L+++M + G +  D++T+  VLK  A   
Sbjct: 121 FDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALL 180

Query: 211 -VGNSRRVKD-----------------------------AHKLFDELSDRDVVSWNCMIS 240
            +G  R V D                             A  +FD  + RD V WN MI+
Sbjct: 181 DLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIA 240

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
               NG   + L + + M   G    + T+V+ +S  A+ GAL  GR +H +  +  F  
Sbjct: 241 ACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGS 300

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           +     +LLDMY+K G +  A  +F+++  R ++SW +MI G+   G  D A  LFR M 
Sbjct: 301 QDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMR 360

Query: 361 REG-IEPDVYAITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGS 418
            E  + PD      +L AC   G+++  K+V D  +    ++  +     L+D+    G 
Sbjct: 361 NEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGR 420

Query: 419 MADAESVFNQMPVK-DIVSWNTMI 441
             +A  V   M VK D   W  ++
Sbjct: 421 FKEASDVIKGMLVKPDSGIWGALL 444



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 139/278 (50%), Gaps = 14/278 (5%)

Query: 217 VKDAHKLFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVL 274
           V  A +LFDE+ ++ +V  WN +I  Y  +G  E  +E+++EML  G    D  T   VL
Sbjct: 114 VSVARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVL 173

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             CA    L  GR VH   ++  ++ ++     L+DMY+KCG +D A  VF+    R  V
Sbjct: 174 KACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAV 233

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
            W SMIA   + G    A+ L R M  EGI P +  + S + A A  G L  G+++H Y 
Sbjct: 234 VWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYG 293

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GAL 444
                 S   +  +L+DMYAK G +  A  +F+Q+  ++++SWN MI           A 
Sbjct: 294 WRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHAC 353

Query: 445 DLFVAMLQNFE--PDGVTMACILPACASLAALERGREI 480
           +LF  M    +  PD +T   +L AC     ++  +E+
Sbjct: 354 ELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEV 391



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 6/179 (3%)

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
           A IL +C    A+  GR++H  +L  G+  D  +A  +VD+Y  CG++ +AR LFD +P 
Sbjct: 67  ATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPN 126

Query: 522 K-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEG- 578
           + ++  W ++I  Y   G    AI  + +M   G +EPD  ++  VL AC  + L+D G 
Sbjct: 127 QGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKAC--AALLDLGA 184

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
            R  +      +    +   A ++D+ ++ G + EA+   +   V  DA +W S++  C
Sbjct: 185 GREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVR-DAVVWNSMIAAC 242



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 157/401 (39%), Gaps = 73/401 (18%)

Query: 66  YNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +N  I  +   G  E A+E+   + +    + D  TY  +L+ CA L  L  G++VH  +
Sbjct: 133 WNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRV 192

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +    D  V    L+ M+  CG + E   VF+        +WN ++    + G   E+
Sbjct: 193 MRTSWAADVFVCAG-LIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEA 251

Query: 183 LYLFKKMQSLGIAADSYTFSCVL--------------------------------KCLAV 210
           L L + M + GIA    T    +                                  L +
Sbjct: 252 LALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDM 311

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLAT 269
              S  V  A  LFD+L  R+++SWN MI G+  +G A+   E+F+ M N      D  T
Sbjct: 312 YAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHIT 371

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V VLS C + G  M   A   F L             ++ +YS            + M 
Sbjct: 372 FVGVLSACNHGG--MVQEAKEVFDL-------------MVTVYS-----------IKPM- 404

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK- 388
              V  +T ++      G F  A  + +GM+   ++PD     ++L+ C     +E+ + 
Sbjct: 405 ---VQHYTCLVDVLGHSGRFKEASDVIKGML---VKPDSGIWGALLNGCKIHKNVELAEL 458

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            +H  I+     +  YV   L ++YA+ G   +A  V   M
Sbjct: 459 ALHKLIELEPEDAGNYV--LLSNIYAQSGKWEEAARVRKLM 497


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/691 (34%), Positives = 389/691 (56%), Gaps = 44/691 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  +++ C  LKS++ GK VH  +   G+  +D  +GS L+ ++   G L + + +
Sbjct: 57  DKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLK-EDVFVGSSLIKLYAENGHLSDAQYL 115

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------- 207
           F+ I      +WN++++ Y K G+   ++ +F +M+   I  +S TF+CVL         
Sbjct: 116 FDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAML 175

Query: 208 -------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                    LA+    + ++ A KLFD L   D+VSWN +ISGY
Sbjct: 176 DLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGY 235

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           + NG+  +   +F+ M++ G   D  T  + L       +L   + +H + ++     ++
Sbjct: 236 VQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDV 295

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              + L+D+Y KC D++ A +   +      V  T+MI+GY   G    A+  FR +V+E
Sbjct: 296 FLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQE 355

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
            ++P     +SI  A A    L +GK++H  I +  +    +V +A++DMYAKCG +  A
Sbjct: 356 RMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLA 415

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
             VFN++  KD + WN+MI           A++LF  M ++    D V+++  L ACA+L
Sbjct: 416 CRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANL 475

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            AL  G+EIHG +++  + +D    ++++DMY KCG L  +R +FD +  K+ +SW  +I
Sbjct: 476 PALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSII 535

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           + YG HG   + +A F++M + GI+PD V+F+ ++ AC H+G VDEG R++++M  E  I
Sbjct: 536 SAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGI 595

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
             ++EHYAC+ D+  R G L EA+  I  MP  PDA +WG+LL  C IH  V+LAE  ++
Sbjct: 596 PARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASK 655

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
           H+F+L+P N+GYYVLLANV A A KW +V K+R  +  RG++K PG SWIE+    ++FV
Sbjct: 656 HLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFV 715

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           A   SHP   +I S+L  L LE+K+EGY P+
Sbjct: 716 AADGSHPLTAQIYSVLDSLLLELKKEGYVPQ 746



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 168/548 (30%), Positives = 264/548 (48%), Gaps = 47/548 (8%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+V  G LK+ + +F  +  G    WN ++  ++  G F  +L  + KM   G++ D YT
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 201 FSCVLK-CLAV-----------------------VGNSR--------RVKDAHKLFDELS 228
           F  V+K C  +                       VG+S          + DA  LFD + 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            +D V WN M++GY+ NG +   +++F EM +     +  T   VLS CA+   L  G  
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H  A+      +    NTLL MYSKC  L  A ++F+ + +  +VSW  +I+GY + G+
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGL-LEIGKDVHDYIKENDMQSSLYVSN 407
              A  LFRGM+  GI+PD     S L  C  + L L+  K++H YI  + +   +++ +
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFL-PCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEP 456
           AL+D+Y KC  +  A+    Q    D V   TMI           AL+ F  ++Q   +P
Sbjct: 300 ALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
             VT + I PA A LAAL  G+E+HG I++  +    +V +AI+DMY KCG L LA  +F
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVF 419

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           + I  KD I W  MI     +G   +AI  F  M   G   D VS    L AC++   + 
Sbjct: 420 NRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALH 479

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            G     +M  +  +   L   + ++D+ ++ GNL+ + R  + M    + + W S++  
Sbjct: 480 YGKEIHGLM-IKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVS-WNSIISA 537

Query: 637 CRIHHEVK 644
              H ++K
Sbjct: 538 YGNHGDLK 545



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 247/520 (47%), Gaps = 48/520 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  +  + + G+   A+++      S+I  ++ T+  +L +CA    L+ G ++H I  
Sbjct: 127 WNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAV 186

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             G+ +D  V  + L+ M+  C  L+  R++F+ +    +  WN ++  Y + G   E+ 
Sbjct: 187 GCGLELDSPV-ANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAE 245

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCL-------------------AVVGN----------- 213
           +LF+ M S GI  DS TF+  L C+                   AVV +           
Sbjct: 246 HLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIY 305

Query: 214 --SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
              R V+ A K   + S  D V    MISGY+ NG  ++ LE F+ ++         T  
Sbjct: 306 FKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFS 365

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++    A   AL  G+ +H   +K    ++    + +LDMY+KCG LD A RVF ++ E+
Sbjct: 366 SIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK 425

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             + W SMI   ++ G    AI LFR M  EG   D  +I+  L ACA    L  GK++H
Sbjct: 426 DAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIH 485

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------- 443
             + +  ++S LY  ++L+DMYAKCG++  +  VF++M  K+ VSWN++I A        
Sbjct: 486 GLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLK 545

Query: 444 --LDLFVAMLQN-FEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANAI 499
             L LF  ML+N  +PD VT   I+ AC     ++ G R  H     +GI A       +
Sbjct: 546 ECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACV 605

Query: 500 VDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
            DM+ + G L  A    + +P   D   W  ++    +HG
Sbjct: 606 ADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHG 645



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 144/326 (44%), Gaps = 26/326 (7%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           ++ GR  E  NL + M +    E ++ D  +    L  CA+L +L  GK++H ++ + G 
Sbjct: 438 SQNGRPGEAINLFRQMGM----EGTRYDCVSISGALSACANLPALHYGKEIHGLMIK-GP 492

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
           +  D    S L+ M+  CG+L   RRVF+++       WN ++  Y   G+ KE L LF 
Sbjct: 493 LRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFH 552

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN-- 245
           +M   GI  D  TF   L  ++  G++ +V +  + +  +++   +         +A+  
Sbjct: 553 EMLRNGIQPDHVTF---LGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMF 609

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV--HAFALKACFSKEIS 303
           G A +  E F+ + ++ F  D     T+L  C   G +        H F L    S    
Sbjct: 610 GRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNS---G 666

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
           +   L ++ +  G     ++V   M ER V      + GY+   V + A  +F  +  +G
Sbjct: 667 YYVLLANVQAGAGKWRKVLKVRSIMKERGV----RKVPGYSWIEV-NNATHMF--VAADG 719

Query: 364 IEPDVYAITSILHACACDGLLEIGKD 389
             P    I S+L +     LLE+ K+
Sbjct: 720 SHPLTAQIYSVLDSL----LLELKKE 741


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/747 (34%), Positives = 388/747 (51%), Gaps = 94/747 (12%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+H Y+ +G+   +  LF+      +AA S         +A    + R+  A   FD + 
Sbjct: 65  LIHLYTLSGDLPAAATLFRA-DPCPVAATS--------LVAAYAAAGRLPAAVSFFDAVP 115

Query: 229 D--RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMF 285
              RD V  N +IS Y     A   + VF+ +L  G    D  +   +LS   +   +  
Sbjct: 116 QARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISV 175

Query: 286 GR--AVHAFALKACFSKEISFNNTLLDMYSKCGDLDG---AIRVFEKMGERSVVSWTSMI 340
                +    LK+     +S +N L+ +Y KC  L+    A +V ++M ++  ++WT+M+
Sbjct: 176 RHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMV 235

Query: 341 AGYAREG-------VFDG------------------------AIRLFRGMVREGIEPDVY 369
            GY R G       VF+                         A  LFR MV E +  D +
Sbjct: 236 VGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEF 295

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDM----QSSLYVSNALMDMYAKCGSMADAESV 425
             TS+L ACA  G    GK VH  I         +++L V+NAL+ +Y+KCG++A A  +
Sbjct: 296 TFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRI 355

Query: 426 FNQMPVKDIVSWNTMIG-----------------------------------------AL 444
           F+ M  KD+VSWNT++                                          AL
Sbjct: 356 FDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDAL 415

Query: 445 DLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            LF  M  ++ +P   T A  + AC  L +L+ G+++HG++++ G     +  NA++ MY
Sbjct: 416 KLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMY 475

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            +CG +  A  +F ++P  D +SW  MI+  G HG G +A+  F+ M   GI PD +SF+
Sbjct: 476 ARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFL 535

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           +VL AC+HSGLVDEG+++F  M+ +  I P  +HY  ++DLL R G + EA   I+ MP 
Sbjct: 536 TVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPF 595

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            P  +IW ++L GCR   +++L    A+ +F++ P + G Y+LL+N Y+ A +W +  ++
Sbjct: 596 EPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARV 655

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R+ +  RG+KK PGCSWIE   KV++FV G + HP A K+   L+ +   M++ GY P T
Sbjct: 656 RKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDT 715

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
           +  L + +  +KE  L  HSE+LA+ FG+L LP G T+ V KNLR+C DCH +  FMSK 
Sbjct: 716 KVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKA 775

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             REIV+RD  RFHHFKDG CSC  +W
Sbjct: 776 VGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 172/405 (42%), Gaps = 74/405 (18%)

Query: 106 CADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI 165
           C  L++  D +KV   + +      D +  + +V  +V  GD+   R VF ++D     +
Sbjct: 207 CEALEATRDARKVLDEMPDK-----DALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVV 261

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----------VVGNSR 215
           WN ++  Y  +G   E+  LF++M    +  D +TF+ VL   A          V G   
Sbjct: 262 WNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQIT 321

Query: 216 RVKD--------------------------AHKLFDELSDRDVVSWNCMISGYIANGVAE 249
           R++                           A ++FD +  +DVVSWN ++SGY+ +   +
Sbjct: 322 RLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLD 381

Query: 250 KGLEVFKEM---------------LNLGFNVDLA----------------TMVTVLSGCA 278
           K +EVF+EM               ++ GF+ D                  T    +S C 
Sbjct: 382 KAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACG 441

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
             G+L  G+ +H   ++  F    S  N L+ MY++CG +  A  +F  M     VSW +
Sbjct: 442 ELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNA 501

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN- 397
           MI+   + G    A+ LF  MV EGI PD  +  ++L AC   GL++ G    + +K + 
Sbjct: 502 MISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDF 561

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMI 441
            +         L+D+  + G + +A  +   MP +   S W  ++
Sbjct: 562 GIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAIL 606



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 13/241 (5%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           TY   +  C +L SL+ GK++H  + + G    +   G+ L+ M+  CG +KE   +F  
Sbjct: 432 TYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSA-GNALITMYARCGAVKEANLMFLV 490

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           + N     WN ++    + G+ +E+L LF +M + GI  D  +F   L  L    +S  V
Sbjct: 491 MPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISF---LTVLTACNHSGLV 547

Query: 218 KDAHKLFDELS-DRDVVSWNCMISGYI-ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
            +  + F+ +  D  ++      +  I   G A +  E    +  + F    +    +LS
Sbjct: 548 DEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILS 607

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNT---LLDMYSKCGDLDGAIRVFEKMGERS 332
           GC   G +  G    A A    F      + T   L + YS  G    A RV + M +R 
Sbjct: 608 GCRTSGDMELG----AHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRG 663

Query: 333 V 333
           V
Sbjct: 664 V 664


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/733 (33%), Positives = 412/733 (56%), Gaps = 46/733 (6%)

Query: 60  VCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKK 117
           +C +  +N  I  F  +G  + A+   +    S +  D  T+  +++ C  L ++   K 
Sbjct: 139 LCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKM 198

Query: 118 VHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
           VH +    G  +D   +GS L+ ++   G + + + +F+++      +WN++++ Y K G
Sbjct: 199 VHELARSMGFHMDL-FIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNG 257

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR---------------------- 215
           +F  +L  F++M++  +  +S +F C+L   A  G  R                      
Sbjct: 258 DFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVAN 317

Query: 216 ----------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                      + DA K+FD +   D V+WN +I+GY+ NG  ++ + +FK M+  G  +
Sbjct: 318 TIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKL 377

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T  + L      G+L + + VH++ ++     ++   + L+D+Y K GD++ A + F
Sbjct: 378 DSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTF 437

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++     V   T+MI+GY   G+   A+ LFR +++EG+ P+   + S+L ACA    L+
Sbjct: 438 QQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLK 497

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
           +GK++H  I +  +++   V +++  MYAK G +  A   F +MPVKD V WN MI    
Sbjct: 498 LGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFS 557

Query: 443 -------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  A+DLF  M     + D V+++  L ACA+  AL  G+E+H +++R+   +D  
Sbjct: 558 QNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTF 617

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           VA+ ++DMY KCG L LARS+FDM+  K+ +SW  +IA YG HG   + +  F++M +AG
Sbjct: 618 VASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAG 677

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           I+PD V+F+ ++ AC H+GLVDEG  +F  M  E  I  ++EH+ACMVDL  R G L EA
Sbjct: 678 IQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEA 737

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           +  I+ MP  PDA  WGSLL  CR+H  V+LA+  ++H+ EL+P+N+GYYVLL+NV+A A
Sbjct: 738 FDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGA 797

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +WE V K+R  +  +G++K PG SWI++ G  ++F A    HP + +I  +LK L LE+
Sbjct: 798 GEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIYLILKNLLLEL 857

Query: 735 KREGYFPKTRYAL 747
           ++ GY P+    L
Sbjct: 858 RKHGYVPQPYLPL 870



 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 171/581 (29%), Positives = 278/581 (47%), Gaps = 47/581 (8%)

Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
            LGS+++ M+V C   K+   +F ++       WN L+  +S  G F  +L  F +M   
Sbjct: 112 TLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGS 171

Query: 193 GIAADSYTFSCVLKCLAVVGN--------------------------------SRRVKDA 220
            +A D YTF  V+K    + N                                +  + DA
Sbjct: 172 NVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDA 231

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
             LFDEL  RD + WN M++GY+ NG     L  F+EM N     +  + V +LS CA  
Sbjct: 232 KYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATR 291

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
           G +  G  +H   +++ F  + +  NT++ MYSKCG+L  A ++F+ M +   V+W  +I
Sbjct: 292 GIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLI 351

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
           AGY + G  D A+ LF+ MV  G++ D     S L +    G L+  K+VH YI  + + 
Sbjct: 352 AGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVP 411

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM 450
             +Y+ +AL+D+Y K G +  A   F Q  + D+     MI           AL+LF  +
Sbjct: 412 FDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWL 471

Query: 451 LQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
           +Q    P+ +TMA +LPACA+LA+L+ G+E+H  IL+ G+     V ++I  MY K G L
Sbjct: 472 IQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRL 531

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
            LA   F  +P KD + W +MI  +  +G    AI  F  M  +G + D VS  + L AC
Sbjct: 532 DLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSAC 591

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           ++   +  G      +     I       + ++D+ S+ G L+ A    +MM    + + 
Sbjct: 592 ANYPALYYGKELHCFVVRNSFISDTFVA-STLIDMYSKCGKLALARSVFDMMDWKNEVS- 649

Query: 630 WGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
           W S++     H   +    +   + E  ++PD+  + V+++
Sbjct: 650 WNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMS 690



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 154/298 (51%), Gaps = 11/298 (3%)

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           R +HA  L    +  ++  + +L MY  C        +F ++     + W  +I G++  
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G FD A+  F  M+   + PD Y    ++ AC     + + K VH+  +       L++ 
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FE 455
           ++L+ +Y   G + DA+ +F+++PV+D + WN M+           AL  F  M  +  +
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           P+ V+  C+L  CA+   +  G ++HG ++R G  +D  VAN I+ MY KCG L  AR +
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
           FD++P  D ++W  +IAGY  +GF  +A+A F  M  +G++ D ++F S L +   SG
Sbjct: 336 FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSG 393


>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/649 (35%), Positives = 349/649 (53%), Gaps = 48/649 (7%)

Query: 230  RDVVSWNCMISGYIAN-GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            R+ + WN  +  + ++ G     LEVFKE+   G   D       L  C     +  G  
Sbjct: 485  RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 544

Query: 289  VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
            +H   +K  F  ++     L++ Y +C  L+ A +VF +M     + W   I    +   
Sbjct: 545  IHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEK 604

Query: 349  FDGAIRLFRGMVREGIEPDVYAITSILHACACD-GLLEIGKDVHDYIKENDMQSSLYVSN 407
                + LFR M    ++ +   I  +L A   + G L +GK+ H Y+  N     +YV  
Sbjct: 605  LQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGT 664

Query: 408  ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------------------------- 442
            +L+DMY K  S+  A++VF+ M  ++I +WN+++                          
Sbjct: 665  SLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKP 724

Query: 443  --------------------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIH 481
                                AL  F  M Q    P+  ++ C+L ACASL+ L++G+EIH
Sbjct: 725  DLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIH 784

Query: 482  GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
               +R+G   D  VA A++DMY K   L  A  +F  I  K L SW  MI G+ + G G 
Sbjct: 785  CLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGK 844

Query: 542  DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
            +AI+ FN+M++ G+ PD ++F ++L AC +SGL+ EGW++F+ M  +  I P+LEHY CM
Sbjct: 845  EAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCM 904

Query: 602  VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNT 661
            VDLL R G L EA+  I  MP+ PDATIWG+LL  CRIH  +K AE  A+++F+LEP+N+
Sbjct: 905  VDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNS 964

Query: 662  GYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK 721
              Y+L+ N+Y+   +WE++  LRE +   G++     SWI+I  +V++F +    HP A 
Sbjct: 965  ANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAG 1024

Query: 722  KIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
            KI   L +L  EMK+ GY P       N DE+EK+  L  H+EKLA+ +G++ + AG+ I
Sbjct: 1025 KIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPI 1084

Query: 782  RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            RV KN R+C DCH  AK++S    RE+ LRD  RFHHF++G+CSC  FW
Sbjct: 1085 RVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 181/420 (43%), Gaps = 71/420 (16%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
            D++ Y   L+ C  +  +  G ++H  + + G  +D   L   L+  +  C  L++  +
Sbjct: 521 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLD-VYLRCALMNFYGRCWGLEKANQ 579

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------- 206
           VF+++ N +  +WN  +    ++   ++ + LF+KMQ   + A++ T   VL+       
Sbjct: 580 VFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELG 639

Query: 207 ------------------CLAVVGNS--------RRVKDAHKLFDELSDRDVVSWNCMIS 240
                             C   VG S          +  A  +FD + +R++ +WN ++S
Sbjct: 640 FLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVS 699

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG------------------------ 276
           GY   G+ E  L +  +M   G   DL T   ++SG                        
Sbjct: 700 GYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMP 759

Query: 277 -----------CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
                      CA+   L  G+ +H  +++  F +++     L+DMYSK   L  A +VF
Sbjct: 760 NSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVF 819

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
            ++  +++ SW  MI G+A  G+   AI +F  M + G+ PD    T++L AC   GL+ 
Sbjct: 820 RRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIG 879

Query: 386 IGKDVHD-YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            G    D  I +  +   L     ++D+  + G + +A  + + MP+K D   W  ++G+
Sbjct: 880 EGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGS 939



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 14/243 (5%)

Query: 102  ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
            +L+ CA L  L+ GK++H +   +G  I+D  + + L+ M+     LK   +VF +I N 
Sbjct: 767  LLRACASLSLLQKGKEIHCLSIRNGF-IEDVFVATALIDMYSKSSSLKNAHKVFRRIQNK 825

Query: 162  KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
             +  WN ++  ++  G  KE++ +F +MQ +G+  D+ TF+ +   L+   NS  + +  
Sbjct: 826  TLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTAL---LSACKNSGLIGEGW 882

Query: 222  KLFDEL-SDRDVVS----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
            K FD + +D  +V     + CM+      G  ++  ++   M       D      +L  
Sbjct: 883  KYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTM---PLKPDATIWGALLGS 939

Query: 277  CANCGALMFGR--AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            C     L F    A + F L+   S        L  ++++  D+D    +    G R+  
Sbjct: 940  CRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQ 999

Query: 335  SWT 337
             W+
Sbjct: 1000 VWS 1002


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 262/726 (36%), Positives = 395/726 (54%), Gaps = 72/726 (9%)

Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
           +  +K +   +  G + +  R+F  +       +N ++  YS  G    +  LF+ +   
Sbjct: 39  IRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR- 97

Query: 193 GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL 252
               D+Y+++ +L  LAV   S  + DA  LFDE+  RD V++N MIS +  +G+    +
Sbjct: 98  ---PDNYSYNTLLHALAV---SSSLADARGLFDEMPVRDSVTYNVMISSHANHGL----V 147

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN----NTL 308
            + +   +L    D  +   +L+     G +   R +        F+    ++    N L
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGL--------FNSRTEWDVISWNAL 199

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGIEPD 367
           +  Y + G +  A  +F++M  R VVSW  M++GYAR G    A RLF    VR     D
Sbjct: 200 MSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR-----D 254

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQS-----SLYVSNALMDM---------- 412
           V+  T+++   A +G+LE  + V D + E +  S     + Y+   +MD           
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPC 314

Query: 413 ------------YAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM 450
                       YA+ G + +A++VF+ MP KD VSW  M+ A          L LF+ M
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374

Query: 451 LQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
            +  E  +    AC+L  CA +AALE G ++HG ++R G      V NA++ MY KCG +
Sbjct: 375 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNM 434

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             AR+ F+ +  +D++SW  MIAGY  HGFG +A+  F+ MR    +PD+++ + VL AC
Sbjct: 435 EDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAAC 494

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           SHSGLV++G  +F  M ++  +  K EHY CM+DLL R G L+EA+  ++ MP  PD+T+
Sbjct: 495 SHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM 554

Query: 630 WGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISR 689
           WG+LL   RIH   +L    AE +FELEP+N G YVLL+N+YA + KW + +K+R  +  
Sbjct: 555 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 614

Query: 690 RGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALIN 749
           RG+KK PG SWIE++ KV+ F AG   HP  +KI + L+ L + MK+ GY   T   L +
Sbjct: 615 RGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHD 674

Query: 750 ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIV 809
            +E EKE  L  HSEKLA+A+GILN+P G+ IRV KNLRVCGDCH   K     A  E++
Sbjct: 675 VEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFK-----AWIELM 729

Query: 810 LRDSNR 815
           L+ S R
Sbjct: 730 LKVSGR 735


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/654 (36%), Positives = 359/654 (54%), Gaps = 43/654 (6%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  LF  + +      N ++  +      E  L ++  +   GF +D  +   +L   + 
Sbjct: 68  ALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSK 127

Query: 280 CGALMFGRAVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
             AL  G  +H  A K  F     F  + L+ MY+ CG +  A  +F+KM  R VV+W  
Sbjct: 128 LSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNI 187

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           MI GY++   +D  ++L+  M   G EPD   + ++L ACA  G L  GK +H +IK+N 
Sbjct: 188 MIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNG 247

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-------------------------- 432
            +   ++  +L++MYA CG+M  A  V++Q+P K                          
Sbjct: 248 FRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFD 307

Query: 433 -----DIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALER 476
                D+V W+ MI           AL LF  M +    PD +TM  ++ ACA++ AL +
Sbjct: 308 RMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQ 367

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
            + IH Y  ++G      + NA++DMY KCG LV AR +F+ +P K++ISW+ MI  + M
Sbjct: 368 AKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAM 427

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG    AIA F+ M++  IEP+ V+FI VLYACSH+GLV+EG +FF+ M  E  I P+ E
Sbjct: 428 HGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQRE 487

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HY CMVDL  R  +L +A   IE MP  P+  IWGSL+  C+ H E++L E  A  + EL
Sbjct: 488 HYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLEL 547

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           EPD+ G  V+L+N+YA+ ++W++V  +R+ +  +G+ K   CS IE+  +V++F+     
Sbjct: 548 EPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRY 607

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           H  + +I   L  +  ++K  GY P T   L++ +E EK+  +  HSEKLA+ +G++   
Sbjct: 608 HKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGER 667

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               IR+ KNLR+C DCH   K +SK  R EIV+RD  RFHHF  G CSCR +W
Sbjct: 668 KESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/490 (29%), Positives = 226/490 (46%), Gaps = 79/490 (16%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------ 207
           +F+ I N      N L+ ++S+    + +L L+  ++  G   D ++F  +LK       
Sbjct: 71  LFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSA 130

Query: 208 ---------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                      +A+     R+ DA  LFD++S RDVV+WN MI 
Sbjct: 131 LNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMID 190

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY  N   +  L++++EM   G   D   + TVLS CA+ G L +G+A+H F     F  
Sbjct: 191 GYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRV 250

Query: 301 EISFNNTLLDMYSKCGDLDGAIRV-------------------------------FEKMG 329
                 +L++MY+ CG +  A  V                               F++M 
Sbjct: 251 GSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMV 310

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           E+ +V W++MI+GYA       A++LF  M R  I PD   + S++ ACA  G L   K 
Sbjct: 311 EKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKW 370

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL----- 444
           +H Y  +N    +L ++NAL+DMYAKCG++  A  VF  MP K+++SW++MI A      
Sbjct: 371 IHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGD 430

Query: 445 -DLFVAML-----QNFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVAN 497
            D  +A+      QN EP+GVT   +L AC+    +E G++    ++  H IS  R    
Sbjct: 431 ADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYG 490

Query: 498 AIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
            +VD+Y +   L  A  L + +P   ++I W  +++    HG     +  F   R   +E
Sbjct: 491 CMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGE--IELGEFAATRLLELE 548

Query: 557 PDEVSFISVL 566
           PD    + VL
Sbjct: 549 PDHDGALVVL 558



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 200/438 (45%), Gaps = 74/438 (16%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D  ++  +L+  + L +L  G ++H +  + G    D  + S L+ M+  CG + + R 
Sbjct: 113 LDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARF 172

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           +F+K+ +  V  WN+++  YS+  ++   L L+++M++ G   D+     VL   A  GN
Sbjct: 173 LFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGN 232

Query: 214 -------SRRVKD-------------------------AHKLFDELSDRDVV-------- 233
                   + +KD                         A +++D+L  + +V        
Sbjct: 233 LSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSG 292

Query: 234 -----------------------SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                                   W+ MISGY  +    + L++F EM       D  TM
Sbjct: 293 YAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITM 352

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           ++V+S CAN GAL+  + +H +A K  F + +  NN L+DMY+KCG+L  A  VFE M  
Sbjct: 353 LSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPR 412

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KD 389
           ++V+SW+SMI  +A  G  D AI LF  M  + IEP+      +L+AC+  GL+E G K 
Sbjct: 413 KNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKF 472

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA----- 443
               I E+ +         ++D+Y +   +  A  +   MP   +++ W +++ A     
Sbjct: 473 FSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHG 532

Query: 444 ---LDLFVAM-LQNFEPD 457
              L  F A  L   EPD
Sbjct: 533 EIELGEFAATRLLELEPD 550



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 179/396 (45%), Gaps = 49/396 (12%)

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           LD A+ +F  +          ++  ++R    +  + L+  + R G   D ++   +L A
Sbjct: 65  LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124

Query: 378 CACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
            +    L +G ++H    K     +  ++ +AL+ MYA CG + DA  +F++M  +D+V+
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184

Query: 437 WNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYIL 485
           WN MI            L L+  M     EPD + +  +L ACA    L  G+ IH +I 
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIK 244

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA------------------------ 521
            +G     ++  ++V+MY  CG + LAR ++D +P+                        
Sbjct: 245 DNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARF 304

Query: 522 -------KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG- 573
                  KDL+ W+ MI+GY       +A+  FN+M++  I PD+++ +SV+ AC++ G 
Sbjct: 305 IFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGA 364

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
           LV   W   +    +      L     ++D+ ++ GNL +A    E MP   +   W S+
Sbjct: 365 LVQAKW--IHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSM 421

Query: 634 LCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL 667
           +    +H +   A  +   + E  +EP+   +  +L
Sbjct: 422 INAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVL 457


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/696 (34%), Positives = 388/696 (55%), Gaps = 35/696 (5%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G + E R+ F+ +    +  WN ++  Y   G  +E+  +F +M    I + +   S  +
Sbjct: 31  GQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYI 90

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K       +R +++A  +F+ + +R+VVSW  M+ GY+  G+  +   +F  M       
Sbjct: 91  K-------NRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPER---- 139

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +  +   +  G  + G +   R ++         K++  +  ++    + G +D A  +F
Sbjct: 140 NEVSWTVMFGGLIDGGRIDDARKLYDMMP----GKDVVASTNMIGGLCREGRVDEAREIF 195

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++M ER+V++WT+MI GY +    D A +LF  M     E    + TS+L      G +E
Sbjct: 196 DEMRERNVITWTTMITGYGQNKRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIE 251

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-- 443
              D  ++ +   M+  +   NA++    + G +  A  VF+QM  +D  +W  MI A  
Sbjct: 252 ---DAEEFFEVMPMKPVI-ACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYE 307

Query: 444 --------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                   L+LF  M  Q   P   ++  IL  CA+LA+L+ GR++H +++R     D  
Sbjct: 308 RKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVY 367

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           VA+ ++ MYVKCG LV A+ +FD  P+KD+I W  +I+GY  HG G +A+  F++M  +G
Sbjct: 368 VASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSG 427

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
             P++V+ I++L ACS+ G ++EG   F  M  +  + P +EHY+C VD+L R G + +A
Sbjct: 428 TMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKA 487

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
              I  M + PDAT+WG+LL  C+ H  + LAE  A+ +FE+EP+N G Y+LL+++ A  
Sbjct: 488 MELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASR 547

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG-SSHPHAKKIESLLKRLRLE 733
            KW +V ++R+ +  + + K PGCSWIE+  KV++F  GG  +HP    I  +L++    
Sbjct: 548 SKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGL 607

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           ++  GY P   + L + DE EK  +L  HSE+LA+A+G+L LP G  IRV KNLRVCGDC
Sbjct: 608 LREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDC 667

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           H   K +SK   REI+LRD+NRFHHF +G CSCR +
Sbjct: 668 HAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 13/165 (7%)

Query: 101 SILQLCADLKSLEDGKKVHS--IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           SIL +CA L SL+ G++VH+  + C+      D  + S L+ M+V CG+L + + VF++ 
Sbjct: 336 SILSVCATLASLQYGRQVHAHLVRCQFD---GDVYVASVLMTMYVKCGELVKAKLVFDRF 392

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
            +  + +WN ++  Y+  G  +E+L +F +M   G   +  T   +L   +  G   +++
Sbjct: 393 PSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGG---KLE 449

Query: 219 DAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEM 258
           +  ++F+ +  +  V+     ++C +      G  +K +E+   M
Sbjct: 450 EGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSM 494


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/697 (35%), Positives = 387/697 (55%), Gaps = 35/697 (5%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G + E R+ F+ +    +  WN ++  Y   G  KE+  LF +M    + + +   S  +
Sbjct: 31  GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K       +R + +A  +F+ + +R+VVSW  M+ GY+  G+  +   +F  M       
Sbjct: 91  K-------NRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER---- 139

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +  +   +  G  + G +   R ++         K++  +  ++    + G +D A  +F
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIF 195

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++M ER+VV+WT+MI GY +    D A +LF  M     E    + TS+L      G +E
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIE 251

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-- 443
              D  ++ +   M+  +   NA++  + + G ++ A  VF+ M  +D  +W  MI A  
Sbjct: 252 ---DAEEFFEVMPMKPVI-ACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYE 307

Query: 444 --------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                   LDLF  M  Q   P   ++  IL  CA+LA+L+ GR++H +++R     D  
Sbjct: 308 RKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVY 367

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           VA+ ++ MYVKCG LV A+ +FD   +KD+I W  +I+GY  HG G +A+  F++M  +G
Sbjct: 368 VASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSG 427

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
             P++V+ I++L ACS++G ++EG   F  M  +  + P +EHY+C VD+L R G + +A
Sbjct: 428 TMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKA 487

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
              IE M + PDAT+WG+LL  C+ H  + LAE  A+ +FE EPDN G YVLL+++ A  
Sbjct: 488 MELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASR 547

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG-SSHPHAKKIESLLKRLRLE 733
            KW +V  +R+ +    + K PGCSWIE+  KV++F  GG  +HP    I  +L++    
Sbjct: 548 SKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGL 607

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           ++  GY P   + L + DE EK  +L  HSE+LA+A+G+L LP G  IRV KNLRVCGDC
Sbjct: 608 LREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDC 667

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H   K +SK   REI+LRD+NRFHHF +G CSCR +W
Sbjct: 668 HAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 33/224 (14%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           ++  F   G++ + RRVF+ +++     W  ++  Y + G   E+L LF +MQ  G+   
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330

Query: 198 SYTFSCVLKCLAVVGNSRRVKDAHK--------------------------------LFD 225
             +   +L   A + + +  +  H                                 +FD
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD 390

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
             S +D++ WN +ISGY ++G+ E+ L++F EM + G   +  T++ +L+ C+  G L  
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 450

Query: 286 GRAV-HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           G  +  +   K C +  +   +  +DM  + G +D A+ + E M
Sbjct: 451 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM 494



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 49/321 (15%)

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           S+ G ++ A + F+ +  +++ SW S+++GY   G+   A +LF  M     E +V +  
Sbjct: 28  SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS----ERNVVSWN 83

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
            ++     + ++   ++V + + E ++ S      A++  Y + G + +AES+F +MP +
Sbjct: 84  GLVSGYIKNRMIVEARNVFELMPERNVVS----WTAMVKGYMQEGMVGEAESLFWRMPER 139

Query: 433 DIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
           + VSW  M G L            DG               +++ R+++  +    + A 
Sbjct: 140 NEVSWTVMFGGLI----------DDG--------------RIDKARKLYDMMPVKDVVAS 175

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
            N+   +     + G +  AR +FD +  +++++WT MI GY  +     A   F  M  
Sbjct: 176 TNMIGGL----CREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP- 230

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC--MVDLLSRTGN 610
              E  EVS+ S+L   + SG +++   FF +M       P     AC  M+      G 
Sbjct: 231 ---EKTEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPVIACNAMIVGFGEVGE 280

Query: 611 LSEAYRFIEMMPVAPDATIWG 631
           +S+A R  ++M    +AT  G
Sbjct: 281 ISKARRVFDLMEDRDNATWRG 301



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 13/165 (7%)

Query: 101 SILQLCADLKSLEDGKKVHS--IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           SIL +CA L SL+ G++VH+  + C+     DD  + S L+ M+V CG+L + + VF++ 
Sbjct: 336 SILSVCATLASLQYGRQVHAHLVRCQFD---DDVYVASVLMTMYVKCGELVKAKLVFDRF 392

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
            +  + +WN ++  Y+  G  +E+L +F +M S G   +  T   +L   +  G   +++
Sbjct: 393 SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAG---KLE 449

Query: 219 DAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEM 258
           +  ++F+ +  +  V+     ++C +      G  +K +E+ + M
Sbjct: 450 EGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM 494


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/691 (34%), Positives = 389/691 (56%), Gaps = 44/691 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  +++ C  LKS++ GK VH  +   G+  +D  +GS L+ ++   G L + + +
Sbjct: 57  DKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLK-EDVFVGSSLIKLYAENGHLSDAQYL 115

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------- 207
           F+ I      +WN++++ Y K G+   ++ +F +M+   I  +S TF+CVL         
Sbjct: 116 FDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAML 175

Query: 208 -------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                    LA+    + ++ A KLFD     D+VSWN +ISGY
Sbjct: 176 DLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGY 235

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           + NG+  +   +F+ M++ G   D  T  + L       +L   + +H + ++     ++
Sbjct: 236 VQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDV 295

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              + L+D+Y KC D++ A ++  +      V  T+MI+GY   G    A+  FR +V+E
Sbjct: 296 FLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQE 355

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
            ++P     +SI  A A    L +GK++H  I +  +    +V +A++DMYAKCG +  A
Sbjct: 356 RMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLA 415

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
             VFN++  KD + WN+MI           A++LF  M ++    D V+++  L ACA+L
Sbjct: 416 CRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANL 475

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            AL  G+EIHG +++  + +D    ++++DMY KCG L  +R +FD +  ++ +SW  +I
Sbjct: 476 PALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSII 535

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           + YG HG   + +A F++M + GI+PD V+F+ ++ AC H+G VDEG R++++M  E  I
Sbjct: 536 SAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGI 595

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
             ++EHYAC+ D+  R G L EA+  I  MP  PDA +WG+LL  C IH  V+LAE  ++
Sbjct: 596 PARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASK 655

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
           H+F+L+P N+GYYVLLANV A A KW +V K+R  +  RG++K PG SWIE+    ++FV
Sbjct: 656 HLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFV 715

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           A   SHP   +I S+L  L LE+K+EGY P+
Sbjct: 716 AADGSHPLTAQIYSVLDSLLLELKKEGYVPQ 746



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 168/548 (30%), Positives = 264/548 (48%), Gaps = 47/548 (8%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+V  G LK+ + +F  +  G    WN ++  ++  G F  +L  + KM   G++ D YT
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 201 FSCVLK-CLAV-----------------------VGNSR--------RVKDAHKLFDELS 228
           F  V+K C  +                       VG+S          + DA  LFD + 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            +D V WN M++GY+ NG +   +++F EM +     +  T   VLS CA+   L  G  
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H  A+      +    NTLL MYSKC  L  A ++F+   +  +VSW  +I+GY + G+
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGL-LEIGKDVHDYIKENDMQSSLYVSN 407
              A  LFRGM+  GI+PD     S L  C  + L L+  K++H YI  + +   +++ +
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFL-PCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEP 456
           AL+D+Y KC  +  A+ +  Q    D V   TMI           AL+ F  ++Q   +P
Sbjct: 300 ALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
             VT + I PA A LAAL  G+E+HG I++  +    +V +AI+DMY KCG L LA  +F
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVF 419

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           + I  KD I W  MI     +G   +AI  F  M   G   D VS    L AC++   + 
Sbjct: 420 NRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALH 479

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            G     +M  +  +   L   + ++D+ ++ GNL+ + R  + M    + + W S++  
Sbjct: 480 YGKEIHGLM-IKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVS-WNSIISA 537

Query: 637 CRIHHEVK 644
              H ++K
Sbjct: 538 YGNHGDLK 545



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 247/520 (47%), Gaps = 48/520 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  +  + + G+   A+++      S+I  ++ T+  +L +CA    L+ G ++H I  
Sbjct: 127 WNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAV 186

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             G+ +D  V  + L+ M+  C  L+  R++F+      +  WN ++  Y + G   E+ 
Sbjct: 187 SCGLELDSPV-ANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAE 245

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCL-------------------AVVGN----------- 213
           +LF+ M S GI  DS TF+  L C+                   AVV +           
Sbjct: 246 HLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIY 305

Query: 214 --SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
              R V+ A K+  + S  D V    MISGY+ NG  ++ LE F+ ++         T  
Sbjct: 306 FKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFS 365

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++    A   AL  G+ +H   +K    ++    + +LDMY+KCG LD A RVF ++ E+
Sbjct: 366 SIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK 425

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             + W SMI   ++ G    AI LFR M  EG   D  +I+  L ACA    L  GK++H
Sbjct: 426 DAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIH 485

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------- 443
             + +  ++S LY  ++L+DMYAKCG++  +  VF++M  ++ VSWN++I A        
Sbjct: 486 GLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLK 545

Query: 444 --LDLFVAMLQN-FEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANAI 499
             L LF  ML+N  +PD VT   I+ AC     ++ G R  H     +GI A       +
Sbjct: 546 ECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACV 605

Query: 500 VDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
            DM+ + G L  A    + +P   D   W  ++    +HG
Sbjct: 606 ADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHG 645


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/543 (40%), Positives = 333/543 (61%), Gaps = 13/543 (2%)

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
           + I  +N L++ + + GDLD AI+VF++M ER+V +W +M++G  +    +  + LFR M
Sbjct: 21  RNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREM 80

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
              G  PD + + S+L  CA       GK VH Y+ +   + +L V ++L  MY K GS+
Sbjct: 81  HELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSL 140

Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPAC 468
            + E V   M ++++V+WNT+I          G LDL+  M +    PD +T+  ++ + 
Sbjct: 141 GEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSS 200

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISW 527
           A LA L +G++IH   ++ G ++   V ++++ MY KCG L  + ++L D     D + W
Sbjct: 201 AELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLD-CEHPDSVLW 259

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
           + MIA YG HG G +A+  F  M Q G+  ++V+F+S+LYACSH+GL ++G  FF +M  
Sbjct: 260 SSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVE 319

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
           +  ++P+LEHY C+VDLL R+G L EA   I  MP+  D  IW +LL  CRIH    +A 
Sbjct: 320 KYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMAT 379

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
           + AE +  L P ++  YVLL+N++A A++W++V K+R  +  R +KK PG SW+E+K +V
Sbjct: 380 RTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRV 439

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
             F  G  SHP +++I+  LK L  EMK  GY P T     + D  EKE +L  HSEKLA
Sbjct: 440 FQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLA 499

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
           +AFG++N+P G  IRV KNLR+C DCH   K +S    REI++RD++RFHHFK G+CSC 
Sbjct: 500 IAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCG 559

Query: 828 GFW 830
            +W
Sbjct: 560 DYW 562



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 186/380 (48%), Gaps = 24/380 (6%)

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR--VKDAHKLFDELSDR 230
           Y K G  +E++  F  M    I + +         + + G+ +   +  A K+FDE+ +R
Sbjct: 2   YFKMGEIQEAIAFFNAMPMRNIMSHN---------ILINGHVQHGDLDSAIKVFDEMLER 52

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           +V +WN M+SG I     E GL +F+EM  LGF  D  T+ +VL GCA   A   G+ VH
Sbjct: 53  NVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVH 112

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
           A+ LK  +   +   ++L  MY K G L    +V + M  R+VV+W ++IAG A+ G F+
Sbjct: 113 AYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFE 172

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
           G + L+  M   G+ PD   + S++ + A    L  G+ +H    +    S++ V ++L+
Sbjct: 173 GVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLI 232

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLF------VAMLQNFEPDG-----V 459
            MY+KCG + D+          D V W++MI A          V + +  E +G     V
Sbjct: 233 SMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDV 292

Query: 460 TMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           T   +L AC+     E+G      ++ ++G+         +VD+  + G L  A ++   
Sbjct: 293 TFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRS 352

Query: 519 IPAK-DLISWTIMIAGYGMH 537
           +P + D++ W  +++   +H
Sbjct: 353 MPLEADVVIWKTLLSACRIH 372



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 164/340 (48%), Gaps = 44/340 (12%)

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWN-----LLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           V  GDL    +VF+++    V  WN     L+  E+++ G     L+LF++M  LG   D
Sbjct: 34  VQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENG-----LFLFREMHELGFLPD 88

Query: 198 SYTFSCVLKCLA------------------------VVGNSR--------RVKDAHKLFD 225
            +T   VL+  A                        VVG+S          + +  K+  
Sbjct: 89  EFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIK 148

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            +  R+VV+WN +I+G   NG  E  L+++  M   G   D  T+V+V+S  A    L  
Sbjct: 149 AMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQ 208

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ +HA A+KA  +  ++  ++L+ MYSKCG L+ +++          V W+SMIA Y  
Sbjct: 209 GQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGF 268

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLY 404
            G  + A+ LF  M +EG+  +     S+L+AC+ +GL E G      + E   ++  L 
Sbjct: 269 HGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLE 328

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
               ++D+  + G + +AE++   MP++ D+V W T++ A
Sbjct: 329 HYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA 368



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/294 (21%), Positives = 133/294 (45%), Gaps = 49/294 (16%)

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-------- 453
           MY K G + +A + FN MP+++I+S N +I           A+ +F  ML+         
Sbjct: 1   MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60

Query: 454 ------------------------FEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
                                   F PD  T+  +L  CA L A   G+++H Y+L++G 
Sbjct: 61  VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGY 120

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             +  V +++  MY+K G L     +   +  +++++W  +IAG   +G     +  +N 
Sbjct: 121 EFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNM 180

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M+ +G+ PD+++ +SV+ + +    + +G +  +    +      +   + ++ + S+ G
Sbjct: 181 MKMSGLRPDKITLVSVISSSAELATLFQGQQ-IHAEAIKAGANSAVAVLSSLISMYSKCG 239

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE-LEPDNTG 662
            L ++ + + +    PD+ +W S++     H       + A H+FE +E +  G
Sbjct: 240 CLEDSMKAL-LDCEHPDSVLWSSMIAAYGFHGR----GEEAVHLFEQMEQEGLG 288



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 138/326 (42%), Gaps = 48/326 (14%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T  S+L+ CA L++   GK+VH+ + + G   +  V+GS L  M++  G L EG +V
Sbjct: 88  DEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNL-VVGSSLAHMYMKSGSLGEGEKV 146

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVV 211
              +    V  WN L+   ++ G+F+  L L+  M+  G+  D  T   V+     LA +
Sbjct: 147 IKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATL 206

Query: 212 GNSRRV-----------------------------KDAHKLFDELSDRDVVSWNCMISGY 242
              +++                             +D+ K   +    D V W+ MI+ Y
Sbjct: 207 FQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAY 266

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL-----MFGRAVHAFALKAC 297
             +G  E+ + +F++M   G   +  T +++L  C++ G        F   V  + LK  
Sbjct: 267 GFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKP- 325

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLF 356
               +     ++D+  + G LD A  +   M  E  VV W ++++        D A R  
Sbjct: 326 ---RLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTA 382

Query: 357 RGMVREGIEPD---VYAITSILHACA 379
             ++R  + P     Y + S +HA A
Sbjct: 383 EEILR--LNPQDSATYVLLSNIHASA 406


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/555 (40%), Positives = 331/555 (59%), Gaps = 11/555 (1%)

Query: 287  RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
            R VH  A      + +   N L+  YS    LD A  +F+ M  R  VSW+ M+ G+A+ 
Sbjct: 755  RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814

Query: 347  GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
            G +      FR ++R G  PD Y +  ++ AC     L++G+ +H  + +  +    +V 
Sbjct: 815  GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874

Query: 407  NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FE 455
             AL+DMY KC  + DA  +F++M  +D+V+W  MIG          +L LF  M +    
Sbjct: 875  AALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 934

Query: 456  PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
            PD V M  ++ ACA L A+ + R I  YI R     D  +  A++DM+ KCG +  AR +
Sbjct: 935  PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 994

Query: 516  FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
            FD +  K++ISW+ MIA YG HG G  A+  F  M ++GI P++++ +S+LYACSH+GLV
Sbjct: 995  FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 1054

Query: 576  DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
            +EG RFF+ M  + ++   ++HY C+VDLL R G L EA + I  M    D  +WG+ L 
Sbjct: 1055 EEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLG 1114

Query: 636  GCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
             CR H +V LAEK A  + EL+P N G+Y+LL+N+YA A +WE+V K+R+ +S+R LKK 
Sbjct: 1115 ACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKI 1174

Query: 696  PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEK 755
            PG +WIE+  K + F  G ++HP +K+I  +LK L  +++  GY P T + L + DE  K
Sbjct: 1175 PGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELK 1234

Query: 756  EVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNR 815
               L  HSEKLA+AFG++  P    IR+ KNLRVCGDCH   K +S    R I++RD+NR
Sbjct: 1235 IGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANR 1294

Query: 816  FHHFKDGRCSCRGFW 830
            FHHFK+G CSC  +W
Sbjct: 1295 FHHFKEGACSCGDYW 1309



 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/526 (39%), Positives = 306/526 (58%), Gaps = 11/526 (2%)

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           +S   NC  L   R VHA A      + I   N L+  YS    LD A  +F+ M  R  
Sbjct: 66  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSW+ M+ G+A+ G +      FR ++R G  PD Y +  ++ AC     L++G+ +H  
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           + +  +    +V  AL+DMY KC  + DA  +F++M  +D+V+W  MIG          +
Sbjct: 186 VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 245

Query: 444 LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           L LF  M +    PD V M  ++ ACA L A+ + R I  YI R     D  +  A++DM
Sbjct: 246 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDM 305

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG +  AR +FD +  K++ISW+ MIA YG HG G  A+  F  M  +G+ PD+++ 
Sbjct: 306 YAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITL 365

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
            S+LYACSH+GLV+EG RFF+ M  + ++   ++HY C+VDLL R G L EA + I+ M 
Sbjct: 366 ASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMT 425

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           +  D  +WG+ L  CR H +V LAEK A  + EL+  N G+YVLL+N+YA A +WE+V K
Sbjct: 426 IEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAK 485

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R+ +S+R LKK PG +WIE+  K + F  G ++HP +K+I  +LK L  +++  GY P 
Sbjct: 486 IRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPD 545

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLR 788
           T + L + DE  K   L  HSEKLA+AFG++  P    IR+ KNLR
Sbjct: 546 TNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 166/336 (49%), Gaps = 13/336 (3%)

Query: 215  RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
            R + DA+ LFD +  RD VSW+ M+ G+   G        F+E++  G   D  T+  V+
Sbjct: 784  RALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVI 843

Query: 275  SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
              C +   L  GR +H    K     +      L+DMY KC +++ A  +F+KM ER +V
Sbjct: 844  RACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLV 903

Query: 335  SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
            +WT MI GYA  G  + ++ LF  M  EG+ PD  A+ +++ ACA  G +   + + DYI
Sbjct: 904  TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 963

Query: 395  KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
            +    Q  + +  A++DM+AKCG +  A  +F++M  K+++SW+ MI           AL
Sbjct: 964  QRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 1023

Query: 445  DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDM 502
            DLF  ML++   P+ +T+  +L AC+    +E G      +   + +  D      +VD+
Sbjct: 1024 DLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDL 1083

Query: 503  YVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMH 537
              + G L  A  L   M   KD   W   +     H
Sbjct: 1084 LGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTH 1119



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 190/386 (49%), Gaps = 38/386 (9%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
            +++ K Y S L  C +L  +   ++VH+     G+ +++ V+ +KL++ +     L + 
Sbjct: 58  QRLNPKFYISALVNCRNLTQV---RQVHAQASVHGM-LENIVVANKLIYFYSYYRALDDA 113

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK----- 206
             +F+ +       W++++  ++K G++      F+++   G   D+YT   V++     
Sbjct: 114 YGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDL 173

Query: 207 ------------------------CLAVVG---NSRRVKDAHKLFDELSDRDVVSWNCMI 239
                                   C A+V      R ++DA  LFD++ +RD+V+W  MI
Sbjct: 174 KNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMI 233

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
            GY   G A + L +F++M   G   D   MVTV+  CA  GA+   R +  +  +  F 
Sbjct: 234 GGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ 293

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            ++     ++DMY+KCG ++ A  +F++M E++V+SW++MIA Y   G    A+ LF  M
Sbjct: 294 LDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMM 353

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGS 418
           +  G+ PD   + S+L+AC+  GL+E G      + E+  +++ +     ++D+  + G 
Sbjct: 354 LSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGR 413

Query: 419 MADAESVFNQMPV-KDIVSWNTMIGA 443
           + +A  +   M + KD   W   +GA
Sbjct: 414 LDEALKLIKSMTIEKDEGLWGAFLGA 439



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 177/367 (48%), Gaps = 35/367 (9%)

Query: 111  SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
            +L   ++VH      G+ + + ++ +KLV  +     L +   +F+ +       W++++
Sbjct: 750  NLTQVRQVHXQASVHGM-LQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 808

Query: 171  HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------------------------ 206
              ++K G++      F+++   G   D+YT   V++                        
Sbjct: 809  GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD 868

Query: 207  -----CLAVV---GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
                 C A+V   G  R ++DA  LFD++ +RD+V+W  MI GY   G A + L +F +M
Sbjct: 869  LDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKM 928

Query: 259  LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
               G   D   MVTV+  CA  GA+   R +  +  +  F  ++     ++DM++KCG +
Sbjct: 929  REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 988

Query: 319  DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
            + A  +F++M E++V+SW++MIA Y   G    A+ LF  M+R GI P+   + S+L+AC
Sbjct: 989  ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 1048

Query: 379  ACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVS 436
            +  GL+E G      + E+  ++  +     ++D+  + G + +A  +   M   KD   
Sbjct: 1049 SHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGL 1108

Query: 437  WNTMIGA 443
            W   +GA
Sbjct: 1109 WGAFLGA 1115



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 139/299 (46%), Gaps = 36/299 (12%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +++  +G F +VG+            +  ++ D  T   +++ C DLK+L+ G+ +H I+
Sbjct: 803  SWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIV 862

Query: 123  CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             + G+ +D  V  + LV M+  C ++++ R +F+K+    +  W +++  Y++ GN  ES
Sbjct: 863  YKFGLDLDHFVCAA-LVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANES 921

Query: 183  LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR-------------------------- 216
            L LF KM+  G+  D      V+   A +G   +                          
Sbjct: 922  LVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDM 981

Query: 217  ------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                  V+ A ++FD + +++V+SW+ MI+ Y  +G   K L++F  ML  G   +  T+
Sbjct: 982  HAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITL 1041

Query: 271  VTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            V++L  C++ G +  G R             ++     ++D+  + G LD A+++   M
Sbjct: 1042 VSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSM 1100



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 6/165 (3%)

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           L + R++H     HG+  +  VAN +V  Y     L  A  LFD +  +D +SW++M+ G
Sbjct: 751 LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 810

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           +   G   +   TF ++ + G  PD  +   V+ AC     +  G R  + + Y+  ++ 
Sbjct: 811 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMG-RLIHHIVYKFGLD- 868

Query: 594 KLEHYAC--MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            L+H+ C  +VD+  +   + +A RF+       D   W  ++ G
Sbjct: 869 -LDHFVCAALVDMYGKCREIEDA-RFLFDKMXERDLVTWTVMIGG 911


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/796 (32%), Positives = 426/796 (53%), Gaps = 72/796 (9%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           +++  C+ L +L  G+++HS I +     ++ VLG+ L+ M+  CG L + ++ F+++  
Sbjct: 12  ALVNACSCLGNLAAGRRIHSQISDRDFE-ENSVLGNALISMYSKCGSLIDAKQAFDRLPR 70

Query: 161 GK---VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA-DSYTF-----SCVLKCLAVV 211
                V  WN ++  + + G+ +E+L LF+ M   G    +S TF     SCV   L  +
Sbjct: 71  ASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSL 130

Query: 212 GNSRRV-----------------------------KDAHKLF----DELSDRDVVSWNCM 238
            + R +                              DA ++F    DE     +V+ + M
Sbjct: 131 EDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAM 190

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           IS    NG  ++ L +F  M   G      T+V+VL+ C+    L  G A  AF L+   
Sbjct: 191 ISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS---MLPVGSAT-AFVLEQAM 246

Query: 299 -----SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
                +++     TLL  Y++  DL  A   F+ +    VVSW +M A Y +      A+
Sbjct: 247 EVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREAL 306

Query: 354 RLFRGMVREGIEPDVYAITSILHACAC---DGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            LF  M+ EG+ P V    + L ACA         IGK +   ++E  ++    V+NA +
Sbjct: 307 VLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATL 366

Query: 411 DMYAKCGSMADAESVFNQM-PVK-DIVSWNTMIGA----------LDLFVAMLQN--FEP 456
           +MYAKCGS+ADA +VF ++ P + D ++WN+M+ A           +LF AM      +P
Sbjct: 367 NMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKP 426

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           + VT   +L A  S  ++ +GREIH  ++ +G  +D  + NA+++MY KCG L  A+++F
Sbjct: 427 NKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIF 486

Query: 517 DMIPA--KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           D   +  +D+I+WT ++AGY  +G    A+  F  M+Q G+ P+ ++FIS L AC+H G 
Sbjct: 487 DKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGK 546

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           +++G    + M  +  I P  +H++C+VDLL R G L EA + +E    A D   W +LL
Sbjct: 547 LEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQA-DVITWMALL 605

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             C+   E++  E+ AE + +L+P+    Y++LA++YA A +W E   +R+ +  +G++ 
Sbjct: 606 DACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRA 665

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
           +PGCS +E+  +++ F AG  SHP +++I   L+RL   +K  GY   T   L +  +  
Sbjct: 666 DPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEH 725

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
           KE  L  HSEKLA+AFG+++ P+G  +RV KNLRVC DCH   K +SK   R+I++RDS+
Sbjct: 726 KERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSS 785

Query: 815 RFHHFKDGRCSCRGFW 830
           R+HHF  G CSC  +W
Sbjct: 786 RYHHFTSGTCSCGDYW 801



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 190/399 (47%), Gaps = 43/399 (10%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM- 328
           ++ +++ C+  G L  GR +H+      F +     N L+ MYSKCG L  A + F+++ 
Sbjct: 10  LIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLP 69

Query: 329 --GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI-EPDVYAITSILHACACDGLLE 385
              +R VV+W +MI+ + R G    A++LFR M  +G   P+     S+L +C   GLL 
Sbjct: 70  RASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLS 129

Query: 386 IG--KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF----NQMPVKDIVSWNT 439
           +   + +H  I    ++   +V  AL+D Y K GS+ DA  VF    ++ P   +V+ + 
Sbjct: 130 LEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSA 189

Query: 440 MIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLA-------ALERGREIH 481
           MI A          L LF AM L+  +P GVT+  +L AC+ L         LE+  E+ 
Sbjct: 190 MISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEV- 248

Query: 482 GYILRHGISADRN--VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
                  +SA R+  +   ++  Y +   L  AR+ FD I + D++SW  M A Y  H  
Sbjct: 249 -------VSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHR 301

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACS---HSGLVDEGWRFFNMMRYECNIEPKLE 596
             +A+  F  M   G+ P   +FI+ L AC+          G R  +++  E  +E    
Sbjct: 302 PREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLE-EAGLEGDTA 360

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMM-PVAPDATIWGSLL 634
                +++ ++ G+L++A    E + P   D   W S+L
Sbjct: 361 VANATLNMYAKCGSLADARAVFERISPTRRDCITWNSML 399



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 36/311 (11%)

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           + P+ +A+ ++++AC+C G L  G+ +H  I + D + +  + NAL+ MY+KCGS+ DA+
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 424 SVFNQMP---VKDIVSWNTMIG----------ALDLFVAMLQN--FEPDGVTMACILPAC 468
             F+++P    +D+V+WN MI           AL LF  M  +    P+ VT   +L +C
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122

Query: 469 --ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF----DMIPAK 522
             A L +LE  R IHG I+  GI  +  V  A+VD Y K G L  A  +F    D  P+ 
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS-------HSGLV 575
            L++ + MI+    +G+  +++  F  M   G +P  V+ +SVL ACS        + ++
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVL 242

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           ++     +  R        L  YA       R+ +LS A    + +  +PD   W ++  
Sbjct: 243 EQAMEVVSATRDNVLGTTLLTTYA-------RSNDLSRARATFDAIQ-SPDVVSWNAMAA 294

Query: 636 GCRIHHEVKLA 646
               HH  + A
Sbjct: 295 AYLQHHRPREA 305


>gi|225441828|ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/623 (38%), Positives = 364/623 (58%), Gaps = 18/623 (2%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
            H+LFDE+   +  +WN +I  ++ NG +++ +  +++ML  G   D  T+  +L+   +
Sbjct: 46  THQLFDEIPVSNTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAARH 105

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             +  FG+ VH  ALK   S E    + LL+MY +    + A  VF K   R+ VSWT +
Sbjct: 106 TSSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGANAAKLVFCKSARRNSVSWTLI 165

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
              Y  E     A+ +F+ MV    E D  A+ + + AC     L+ G+ VH+  K+  +
Sbjct: 166 SRLYIMEDKPGLAVDMFKQMVESKSEIDPLALVTAIVACGMLKSLQEGRYVHEIAKKCGL 225

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVA 449
           ++ + VSN+L+ MY  CGS+ DA +VF++MP KD++SW  +             L LF  
Sbjct: 226 EADVLVSNSLLKMYIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQ 285

Query: 450 M-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M ++  +PD + ++ ILPAC   AA ++G+EIH Y+LR+GI  +  V NA++DMYVK G 
Sbjct: 286 MSMEGVKPDSLAISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGF 345

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLY 567
           +  A  +F  +  +D ISWT+MI GY +HG G   +  F  M + + +E D++++ + L+
Sbjct: 346 IESAAKIFAGMKDRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALH 405

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           AC+ + LV++G  +FN     C   PK  HYA MV LLSR G   EA  F+E   +    
Sbjct: 406 ACTTARLVEQGRFYFN-----CITAPKSRHYALMVALLSRVGLFDEARVFMEEHKLEGHV 460

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            +  +LL GCRIHH ++ A++V E + +L+  N   YVLL+N Y+   KW+ V +LRE I
Sbjct: 461 EVLRALLDGCRIHHNMRTAKRVIEQLCDLQTLNADNYVLLSNWYSSFAKWDMVNELRETI 520

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
              GLK     SWIE + K+++F  G  SHP ++KI   L  L  +++ EG      ++L
Sbjct: 521 RDMGLKPRKAYSWIEFRNKIHVFGTGDVSHPRSEKIYWELHSLMKKIEEEGTRLNLDFSL 580

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
            + DE E+E    GHSE LA +FG+++  AG TIRVTKNLR+CG+CH+ AK +SK   RE
Sbjct: 581 HDVDE-ERECVPIGHSELLATSFGLISTQAGATIRVTKNLRMCGNCHDSAKAISKIVERE 639

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           I+++D + FHHFKDG CSC  FW
Sbjct: 640 IIIKDPSCFHHFKDGFCSCGDFW 662



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 172/376 (45%), Gaps = 44/376 (11%)

Query: 147 DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
           D     ++F++I     F WN L+  +   G+    +  +++M   G+  D +T   +L 
Sbjct: 42  DFGLTHQLFDEIPVSNTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILT 101

Query: 207 C--------------------------------LAVVGNSRRVKDAHKLFDELSDRDVVS 234
                                            L + G       A  +F + + R+ VS
Sbjct: 102 AARHTSSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGANAAKLVFCKSARRNSVS 161

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           W  +   YI        +++FK+M+     +D   +VT +  C    +L  GR VH  A 
Sbjct: 162 WTLISRLYIMEDKPGLAVDMFKQMVESKSEIDPLALVTAIVACGMLKSLQEGRYVHEIAK 221

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           K     ++  +N+LL MY  CG +  A  VF++M  + V+SWT +  GY + G F+  ++
Sbjct: 222 KCGLEADVLVSNSLLKMYIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLK 281

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LFR M  EG++PD  AI+SIL AC      + GK++H Y+  N +  ++ V NA++DMY 
Sbjct: 282 LFRQMSMEGVKPDSLAISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYV 341

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMI--------GAL--DLFVAMLQN--FEPDGVTMA 462
           K G +  A  +F  M  +D +SW  MI        G L  DLF  M +N   E D +  A
Sbjct: 342 KSGFIESAAKIFAGMKDRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYA 401

Query: 463 CILPACASLAALERGR 478
             L AC +   +E+GR
Sbjct: 402 AALHACTTARLVEQGR 417



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 173/349 (49%), Gaps = 17/349 (4%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           M  K  D     ++F+++   +  +W ++I  +   G  D  +  +R M+  G+ PD + 
Sbjct: 36  MSQKSIDFGLTHQLFDEIPVSNTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHT 95

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           I  IL A         GK VH +  +  + S  YV +AL++MY +      A+ VF +  
Sbjct: 96  IPRILTAARHTSSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGANAAKLVFCKSA 155

Query: 431 VKDIVSWNTMIG-----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGR 478
            ++ VSW T+I            A+D+F  M+++  E D + +   + AC  L +L+ GR
Sbjct: 156 RRNSVSW-TLISRLYIMEDKPGLAVDMFKQMVESKSEIDPLALVTAIVACGMLKSLQEGR 214

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
            +H    + G+ AD  V+N+++ MY+ CG +  AR++FD +P+KD+ISWT +  GY  +G
Sbjct: 215 YVHEIAKKCGLEADVLVSNSLLKMYIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNG 274

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPKLEH 597
              + +  F  M   G++PD ++  S+L AC       +G      ++R   ++   +++
Sbjct: 275 GFNEGLKLFRQMSMEGVKPDSLAISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQN 334

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
              ++D+  ++G +  A +    M    DA  W  ++ G  +H + +L 
Sbjct: 335 --AVLDMYVKSGFIESAAKIFAGMK-DRDAISWTVMILGYSLHGQGELG 380



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 39/268 (14%)

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           KS+ID     + +  C  LKSL++G+ VH I  + G+  D  ++ + L+ M++ CG +K+
Sbjct: 189 KSEIDPLALVTAIVACGMLKSLQEGRYVHEIAKKCGLEAD-VLVSNSLLKMYIDCGSIKD 247

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
            R VF+++ +  V  W  +   Y K G F E L LF++M   G+  DS   S +L     
Sbjct: 248 ARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEGVKPDSLAISSILPACGR 307

Query: 211 VGNSRRVKDAH--------------------------------KLFDELSDRDVVSWNCM 238
               ++ K+ H                                K+F  + DRD +SW  M
Sbjct: 308 GAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIFAGMKDRDAISWTVM 367

Query: 239 ISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           I GY  +G  E G+++F++M  N    +D       L  C     +  GR    F     
Sbjct: 368 ILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVEQGR----FYFNCI 423

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVF 325
            + +      ++ + S+ G  D A RVF
Sbjct: 424 TAPKSRHYALMVALLSRVGLFDEA-RVF 450



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 1/103 (0%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           S E  K D+    SIL  C    + + GK++H+ +  +GI ++  V  + ++ M+V  G 
Sbjct: 287 SMEGVKPDSLAISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNA-VLDMYVKSGF 345

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           ++   ++F  + +     W +++  YS  G  +  + LF+KM+
Sbjct: 346 IESAAKIFAGMKDRDAISWTVMILGYSLHGQGELGVDLFRKME 388


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 269/768 (35%), Positives = 419/768 (54%), Gaps = 95/768 (12%)

Query: 152 RRVFN-KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
           RR ++  I +   F WN L+ + + T N + +L  F +MQ+  + ++++TF  +LK  A 
Sbjct: 6   RRWYHCSISHKDTFHWNSLIAK-NATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAA 64

Query: 211 V--------------------------------GNSRRVKDAHKLFDELSDR--DVVSWN 236
           +                                G       A ++FDE+ +   DVVSW 
Sbjct: 65  LRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWT 124

Query: 237 CMISGYIANGVAEKGLEVFKEMLNL-GFN------VDLATMVTVLSGCA-NCGA--LMFG 286
            +IS Y +NG  ++  + F  M  + G++      VD+ ++  ++S CA  CG+  L  G
Sbjct: 125 ALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRG 184

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE--KMGERSVVSWTSMIAGYA 344
            AVH   +K  F       N+++ MYS C D+ GA RVF    + +R VVSW S+I+G+ 
Sbjct: 185 SAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFT 244

Query: 345 REGVFDGAIRLFRGMVREG---IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
             G  + A+R F  MV EG   +EP+   + ++L +CA  G +E    VH+YI      S
Sbjct: 245 LNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSR--HS 302

Query: 402 SLYVS------NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           SL V+       AL+DM+A+CG++A A  +F+ +  K++V W+ MI           AL 
Sbjct: 303 SLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALR 362

Query: 446 LFVAMLQN-------FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
           LF  ML          +P+ VT+  ++ AC+ L A      IH Y +  G+  D  +A+A
Sbjct: 363 LFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASA 422

Query: 499 IVDMYVKCGVLVLARSLFDMI--PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           ++DM  KCG +   R +F  +    + ++SW+ MI   G+HG G  A+  F++MR  G E
Sbjct: 423 LIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYE 482

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           P+E+++ISVL ACSH+GLV++G   FN M  +  + P  +HYAC+VDLL R G+L EA+ 
Sbjct: 483 PNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHN 542

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
            I  MP+  D  +WGSLL  C +H   KL E V + +  L+ ++ G++VLLAN+Y +A +
Sbjct: 543 VILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGR 602

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA----KKIESLLKRLRL 732
           W++V ++R ++ R GL+K PG S+IEI  +V  F+A   SHP +    K+++ L +R+R 
Sbjct: 603 WDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRK 662

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL----------NLPAGQTIR 782
             K   Y  +T   + + D     +    HSE+LA+AFG++          +L     IR
Sbjct: 663 AAK---YVTETGLNVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIR 719

Query: 783 VTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +TKNLRVC DCH   K +SK   RE+++RD++RFHHF+DG CSC  +W
Sbjct: 720 ITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 244/515 (47%), Gaps = 75/515 (14%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ ++L+ CA L+ L    +VH+ +   G+  D     + LV  +  CG      +VF++
Sbjct: 54  TFPALLKACAALRRLLPTLQVHAYLTRLGLAADR-FSAAALVDAYGKCGHAYYAAQVFDE 112

Query: 158 IDNGKVFI--WNLLMHEYSKTGNFKESLYLFKKMQ----------------SLGIAADSY 199
           +  G V +  W  L+  YS  G   E+   F +M+                SLG    + 
Sbjct: 113 MPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSAC 172

Query: 200 TFSCVLKCL----AV--------------VGNS--------RRVKDAHKLFD--ELSDRD 231
              C   CL    AV              +GNS        + V  A ++F+   +  RD
Sbjct: 173 AVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRD 232

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV---DLATMVTVLSGCANCGALMFGRA 288
           VVSWN +ISG+  NG AE+ L  F++M++ G +    +  T++ +L  CA  G +     
Sbjct: 233 VVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSW 292

Query: 289 VHAFALKA----CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           VH +          +K++     LLDM+++CG+L  A  +F+ +  ++VV W++MIAGY 
Sbjct: 293 VHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYE 352

Query: 345 REGVFDGAIRLFRGMVREG------IEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +    + A+RLFR M+ EG      ++P+   + S++ AC+  G       +H Y     
Sbjct: 353 QGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATG 412

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQM--PVKDIVSWNTMIG----------ALDL 446
           +     +++AL+DM AKCG +     VF++M    + +VSW++MIG          AL+L
Sbjct: 413 LDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALEL 472

Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYV 504
           F  M    +EP+ +T   +L AC+    +E+G+     + + +G+S        +VD+  
Sbjct: 473 FSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLG 532

Query: 505 KCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
           + G L  A ++   +P K DL  W  ++A   +HG
Sbjct: 533 RAGHLDEAHNVILNMPIKADLALWGSLLAACHLHG 567



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 148/335 (44%), Gaps = 66/335 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAM---EVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVH 119
           ++N+ I  F   G  E+A+   E + S   S ++    T  ++L+ CA+L  +E    VH
Sbjct: 235 SWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVH 294

Query: 120 SIICE---SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
             I     S +V  D V+ + L+ M   CG+L   R +F+ ++   V  W+ ++  Y + 
Sbjct: 295 EYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQG 354

Query: 177 GNFKESLYLFKKMQSLG------IAADSYTFSCVLKCLAVVGNSRRVKDAHK-------- 222
              +E+L LF++M   G      +  ++ T   V+   + +G SR     HK        
Sbjct: 355 SCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLD 414

Query: 223 ------------------------LFDEL--SDRDVVSWNCMISGYIANGVAEKGLEVFK 256
                                   +F E+  S R VVSW+ MI     +G  ++ LE+F 
Sbjct: 415 QDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFS 474

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS---KEISFNNT------ 307
           EM   G+  +  T ++VLS C++ G +  G        K+CF+   K+   + T      
Sbjct: 475 EMRTGGYEPNEITYISVLSACSHAGLVEQG--------KSCFNSMEKDYGMSPTGKHYAC 526

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIA 341
           L+D+  + G LD A  V   M  ++ ++ W S++A
Sbjct: 527 LVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLA 561


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/640 (37%), Positives = 353/640 (55%), Gaps = 16/640 (2%)

Query: 204 VLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
           +L   + +GN   V+   K FDE+   D+VSWN +I+ YI N   ++    F+ ML  G 
Sbjct: 1   MLSAYSQIGNIPAVR---KAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGI 57

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
           N     +   LS C +   +  GR++    L     +E      L+ MY K G    A  
Sbjct: 58  NPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAAS 117

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF +M  R VV+W++M+A YAR G    A+ LFR M  +G+ P+   + S L ACA  G 
Sbjct: 118 VFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGD 177

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
           L  G  +H  ++   +QS + V  AL+++Y KCG +  A   F Q+  K++V+W+ +  A
Sbjct: 178 LRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAA 237

Query: 444 LD-----------LFVAMLQNFEPDGVTMACILPACASLAALERGREIH--GYILRHGIS 490
                        L    L+   P+  T   +L ACA++AAL++GR IH    +L  G+ 
Sbjct: 238 YARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLE 297

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
           +D  V  A+V+MY KCG L LA  +FD I   DL+ W  +IA    HG    A+  F  M
Sbjct: 298 SDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERM 357

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
           R  G++P  ++F SVL+ACSH+G++D+G + F     +  I P+ EH+ CMVDLL R G 
Sbjct: 358 RLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGW 417

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
           + ++   +  MP  P    W + L  CR +  +  A   AE++F+L+P     YVLL+N+
Sbjct: 418 IVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNM 477

Query: 671 YAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL 730
           YA+A +W +V ++R+ +      K  G SWIE+K +V+ F++G   HP   +I + L+RL
Sbjct: 478 YAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRL 537

Query: 731 RLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVC 790
              MK  GY P T   L +  +  KE+ +  HSEKLAMAF +L  P G  IRV KNLRVC
Sbjct: 538 TKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVC 597

Query: 791 GDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            DCH  +KF+SK   REIV+RD NRFH F++G CSC  +W
Sbjct: 598 NDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 176/377 (46%), Gaps = 37/377 (9%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           L  C D + +  G+ +   I  +GI  ++ ++ + LV M+   G   +   VF ++ +  
Sbjct: 68  LSACTDAREITIGRSIQLAILGTGIE-EESIVQTALVSMYGKLGHCTDAASVFLRMSHRD 126

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------- 215
           V  W+ ++  Y++ G+ +E+L LF++M   G+A +  T    L   A +G+ R       
Sbjct: 127 VVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQ 186

Query: 216 -------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
                                    R++ A + F ++ +++VV+W+ + + Y  N     
Sbjct: 187 RVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRD 246

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH--AFALKACFSKEISFNNTL 308
            + V   M   G   +  T V+VL  CA   AL  GR +H     L      ++     L
Sbjct: 247 AIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTAL 306

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           ++MYSKCG+L  A  +F+K+    +V W S+IA  A+ G  + A+ LF  M  EG++P +
Sbjct: 307 VNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTI 366

Query: 369 YAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
              TS+L AC+  G+L+ G K    +I ++ +         ++D+  + G + D+E +  
Sbjct: 367 ITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLL 426

Query: 428 QMPVKD-IVSWNTMIGA 443
            MP +   V+W   +GA
Sbjct: 427 HMPFEPHPVAWMAFLGA 443



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 66/113 (58%), Gaps = 3/113 (2%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVH--SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           ++ T+ S+L  CA + +L+ G+++H  + +   G+  D  VL + LV M+  CG+L    
Sbjct: 262 NSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVL-TALVNMYSKCGNLALAG 320

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
            +F+KI +  + +WN L+   ++ G  +++L LF++M+  G+     TF+ VL
Sbjct: 321 DMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVL 373


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/638 (38%), Positives = 371/638 (58%), Gaps = 23/638 (3%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           K +A    + R+ DA KLFD +S RDVVSWN MI G +  G       +F EM      +
Sbjct: 48  KMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNV-I 106

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFAL-KACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
              TMV         G L FGR   A  L      K+++  N ++  Y + G ++  +R+
Sbjct: 107 SWTTMVN--------GYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRL 158

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           FE+M  R V+SWTSMI G    G  + A+ +F+ M+R G+EP       +L ACA     
Sbjct: 159 FEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEF 218

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--- 441
            +G  VH ++ +       ++S +L+  YA C  +  A  +FN+   K++V W  ++   
Sbjct: 219 NLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAY 278

Query: 442 -------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                   AL +F  M +    P+  T +  L AC  L AL++G+EIH   ++ G+  D 
Sbjct: 279 VWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDV 338

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            V N++V MY +CG +  A ++F  I  KD++SW  +I G   HGFG  A+  FN M + 
Sbjct: 339 FVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRR 398

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMM-RYECNIEPKLEHYACMVDLLSRTGNLS 612
           G++P+E++F  +L ACS SG++ +G  FF  + RY+ N+  + +HYACMVD+L R G L 
Sbjct: 399 GVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNV-LRPQHYACMVDILGRCGKLD 457

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           EA   +  MPV  ++ IW +LL  CR+H  +++AE+ A+H+ +LEP+ +  YVLL+N+YA
Sbjct: 458 EAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYA 517

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
            A +W +V ++R K+ + GL K PG SW+ ++GK + F++   SHP +++I   L  L  
Sbjct: 518 SAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGK 577

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
           ++K  GY P  ++AL + ++ +KE  L  HSE+LA+AFG+++   G TI V KNLRVCGD
Sbjct: 578 KLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGD 637

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CH + K MSK   R+IV+RDS RFHHFK+G CSC  +W
Sbjct: 638 CHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 203/407 (49%), Gaps = 22/407 (5%)

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
           CG+L    R+F+++    V  W  +++ Y K G  + +  LF  M    +AA +      
Sbjct: 87  CGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGY 146

Query: 205 LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
            +       + RV++  +LF+E+  RDV+SW  MI G   NG +E+ L VFK+ML  G  
Sbjct: 147 FE-------NGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVE 199

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALK-ACFSKEISFNNTLLDMYSKCGDLDGAIR 323
              +T   VLS CAN      G  VH   +K  CF  E   + +L+  Y+ C  ++ A +
Sbjct: 200 PTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEF-ISVSLITFYANCMKIEHAHK 258

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           +F +   ++VV WT+++  Y        A+R+F  M + G  P+    +  L AC     
Sbjct: 259 IFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEA 318

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-- 441
           L+ GK++H    +  +++ ++V N+L+ MY +CG++  A +VF  +  KDIVSWN++I  
Sbjct: 319 LDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVG 378

Query: 442 --------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    AL  F  M++   +P+ +T   +L AC+    L +GR    YI R+  +  
Sbjct: 379 SAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVL 438

Query: 493 RNVANA-IVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           R    A +VD+  +CG L  A  L   +P K + + W  +++   +H
Sbjct: 439 RPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVH 485



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 167/348 (47%), Gaps = 41/348 (11%)

Query: 129 IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
           + D    + +V  +   G ++EG R+F ++    V  W  ++      G  +E+L++FKK
Sbjct: 133 VKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKK 192

Query: 189 MQSLGIAADSYTFSCVLKCLA--------------------------------VVGNSRR 216
           M   G+     TF+CVL   A                                   N  +
Sbjct: 193 MLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMK 252

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++ AHK+F+E   ++VV W  +++ Y+ N   +  L VF +M  +G   + +T    L  
Sbjct: 253 IEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKA 312

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C    AL  G+ +H  A+K     ++   N+L+ MY++CG+++ A+ VF  + E+ +VSW
Sbjct: 313 CCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSW 372

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-- 394
            S+I G A+ G    A+  F  M+R G++P+    T +L AC+  G+L  G+   +YI  
Sbjct: 373 NSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISR 432

Query: 395 -KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
            K N ++   Y    ++D+  +CG + +AE +   MPVK     N+MI
Sbjct: 433 YKSNVLRPQHYA--CMVDILGRCGKLDEAEELVRYMPVKA----NSMI 474



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 176/383 (45%), Gaps = 47/383 (12%)

Query: 298 FSKEISFN-NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
           +++ I+ +  T L  + K   LD A  +F+K+   ++  +T MIAGY R      A++LF
Sbjct: 7   YTRTITLSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLF 66

Query: 357 RGM-VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS-------------- 401
             M VR     DV +  S++  C   G L +   + D + E ++ S              
Sbjct: 67  DRMSVR-----DVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRV 121

Query: 402 --------SLYVS-----NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL-- 446
                    ++V      NA++  Y + G + +   +F +MPV+D++SW +MIG LDL  
Sbjct: 122 ELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNG 181

Query: 447 --------FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                   F  ML++  EP   T AC+L ACA+      G ++HG++++ G      ++ 
Sbjct: 182 KSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISV 241

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           +++  Y  C  +  A  +F+    K+++ WT ++  Y  +    DA+  F DM + G  P
Sbjct: 242 SLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALP 301

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           ++ +F   L AC     +D+G +  + M  +  +E  +     +V + +  GN++ A   
Sbjct: 302 NQSTFSITLKACCGLEALDKG-KEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAV 360

Query: 618 IEMMPVAPDATIWGSLLCGCRIH 640
              +    D   W S++ G   H
Sbjct: 361 FRNIN-EKDIVSWNSIIVGSAQH 382



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 167/427 (39%), Gaps = 80/427 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDT--KTYCSILQLCADLKSLEDGKKVHSII 122
           ++ + IG     G  E+A+ V     +S ++    T+  +L  CA+      G +VH  +
Sbjct: 169 SWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHV 228

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G    + +  S + F +  C  ++   ++FN+     V  W  L+  Y      +++
Sbjct: 229 VKLGCFFHEFISVSLITF-YANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDA 287

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC---------------LAV---------VGNSR--- 215
           L +F  M  +G   +  TFS  LK                +A+         VGNS    
Sbjct: 288 LRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVM 347

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 V  A  +F  ++++D+VSWN +I G   +G     L  F +M+  G + +  T 
Sbjct: 348 YTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITF 407

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISF--NNTLLDMYSKCGDLDGAIRVFEKM 328
             +LS C+  G L+ GR         CF + IS   +N L   +  C             
Sbjct: 408 TGLLSACSRSGMLLKGR---------CFFEYISRYKSNVLRPQHYAC------------- 445

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                     M+    R G  D A  L R M    ++ +     ++L AC     LE+ +
Sbjct: 446 ----------MVDILGRCGKLDEAEELVRYM---PVKANSMIWLALLSACRVHSNLEVAE 492

Query: 389 DVHDYIKENDMQ-SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV-----SWNTMIG 442
               +I + +   SS YV   L ++YA  G  AD   +  +M    +V     SW  + G
Sbjct: 493 RAAKHILDLEPNCSSAYV--LLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRG 550

Query: 443 ALDLFVA 449
               F++
Sbjct: 551 KKHEFLS 557



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 14/142 (9%)

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           AR +FD IP+ +L  +T MIAGY  +   CDA+  F+ M       D VS+ S++  C  
Sbjct: 31  ARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR----DVVSWNSMIKGCLD 86

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
            G +    R F+ M      E  +  +  MV+   + G +  A R    M V  D   W 
Sbjct: 87  CGNLGMATRLFDEMP-----EKNVISWTTMVNGYLKFGRVELAQRLFLDMHV-KDVAAWN 140

Query: 632 SLLCGC----RIHHEVKLAEKV 649
           +++ G     R+   V+L E++
Sbjct: 141 AMVHGYFENGRVEEGVRLFEEM 162


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 261/763 (34%), Positives = 391/763 (51%), Gaps = 102/763 (13%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
            FI N L++ Y K+ N   +  LF K+    I A +         L+   +S  VK A +
Sbjct: 40  TFILNRLINIYCKSSNITYARKLFDKIPKPDIVART-------TLLSAYSSSGNVKLAQQ 92

Query: 223 LFD--ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA-- 278
           LF+   L+ RD VS+N MI+ Y         L +F +M   GF  D  T  +VLS  +  
Sbjct: 93  LFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLI 152

Query: 279 ----------NCGALMFGRAVHAF---ALKACF----------------SKEISFN---- 305
                     +C  +  G  +      AL +C+                S    F+    
Sbjct: 153 ADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPK 212

Query: 306 --------NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
                    T++  Y +  DL  A  + + +     V+W +MI+GY R G+++ A   FR
Sbjct: 213 NQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFR 272

Query: 358 GMVREGIEPDVYAITSILHAC-ACD---GLLEIGKDVHDYIKENDMQSS----LYVSNAL 409
            M   GI+ D Y  TS++ AC +C+   G+   G+ VH YI    ++ S    L V+NAL
Sbjct: 273 RMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNAL 332

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------------------------- 443
           +  Y K   M +A  VF++MPV+DI+SWN ++                            
Sbjct: 333 ITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWT 392

Query: 444 ---------------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRH 487
                          L LF  M  +  EP     A  + AC+ L +L+ G++IH  ++R 
Sbjct: 393 VMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRL 452

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           G  +  +  NA++ MY +CGV+  A S+F  +P  D +SW  MIA    HG G  AI  F
Sbjct: 453 GHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELF 512

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
             M +  I PD ++F+++L AC+H+GL+ EG  +F+ M     I P  +HYA ++DLL R
Sbjct: 513 EQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCR 572

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            G   +A   I+ MP    A IW +LL GCRIH  ++L  + A+ + EL P   G Y++L
Sbjct: 573 AGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIIL 632

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLL 727
           +N+YA   +W+EV ++R  +  RG+KK PGCSW+E++  V++F+   + HP  + + + L
Sbjct: 633 SNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYL 692

Query: 728 KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNL 787
           ++L  EMK+ GY P T++ L + +   KE +L  HSEKLA+ +GI+ LP G TIRV KNL
Sbjct: 693 QQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNL 752

Query: 788 RVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           R+CGDCH   K++SK   REIV+RD  RFHHFK+G CSC  +W
Sbjct: 753 RICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 162/375 (43%), Gaps = 48/375 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCAD----LKSLEDGKKVH 119
           +NA I  +   G  E+A +         I  D  TY S++  C      +     G++VH
Sbjct: 251 WNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVH 310

Query: 120 SIICESGIVIDDGVLGS---KLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
             I  + +      + S    L+  +     + E RRVF+K+    +  WN ++  Y   
Sbjct: 311 GYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYV-- 368

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWN 236
                                               N++R+++A+ +F E+ +R+V++W 
Sbjct: 369 ------------------------------------NAQRIEEANSIFSEMPERNVLTWT 392

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MISG   NG  E+GL++F +M + G           ++ C+  G+L  G+ +H+  ++ 
Sbjct: 393 VMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRL 452

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
                +S  N L+ MYS+CG ++ A  VF  M     VSW +MIA  A+ G    AI LF
Sbjct: 453 GHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELF 512

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAK 415
             M++E I PD     +IL AC   GL++ G+   D +     +         L+D+  +
Sbjct: 513 EQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCR 572

Query: 416 CGSMADAESVFNQMP 430
            G    A+SV   MP
Sbjct: 573 AGMFLKAQSVIKSMP 587



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 122/518 (23%), Positives = 201/518 (38%), Gaps = 140/518 (27%)

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
           +  RAVHA  L + F       N L+++Y K  ++  A ++F+K+ +  +V+ T++++ Y
Sbjct: 22  IIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAY 81

Query: 344 AREG-------VFD--------------------------GAIRLFRGMVREGIEPDVYA 370
           +  G       +F+                           A+ LF  M R G  PD + 
Sbjct: 82  SSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFT 141

Query: 371 ITSILHACACDGLLEIGKDVH------DYIKENDMQSSLYVSNALMDMYAKCGS------ 418
            +S+L A +    L   ++ H      + IK   +     V+NAL+  Y  C S      
Sbjct: 142 FSSVLSALS----LIADEERHCQMLHCEVIKLGTLLIP-SVTNALLSCYVCCASSPLVKS 196

Query: 419 ---MADAESVFNQMPVKDI---------------------------------VSWNTMIG 442
              MA A  VF++ P   I                                 V+WN MI 
Sbjct: 197 SQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMIS 256

Query: 443 ----------ALDLFVAMLQ-NFEPDGVTMACILPACAS----LAALERGREIHGYILRH 487
                     A D F  M     + D  T   ++ AC S    +     GR++HGYILR 
Sbjct: 257 GYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRT 316

Query: 488 GISADRN----VANAIVDMYVKCGVLVLARSLFDMIPAKDLIS----------------- 526
            +    +    V NA++  Y K   ++ AR +FD +P +D+IS                 
Sbjct: 317 VVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEA 376

Query: 527 --------------WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
                         WT+MI+G   +GFG + +  FN M+  G+EP + +F   + ACS  
Sbjct: 377 NSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVL 436

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           G +D G +  + +      +  L     ++ + SR G +  A      MP   D+  W +
Sbjct: 437 GSLDNGQQIHSQV-IRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYV-DSVSWNA 494

Query: 633 LLCGCRIH-HEVKLAEKVAEHVFE-LEPDNTGYYVLLA 668
           ++     H H VK  E   + + E + PD   +  +L 
Sbjct: 495 MIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILT 532



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 166/402 (41%), Gaps = 79/402 (19%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           ++  G +P+ + +  +++       +   + + D I + D    +     L+  Y+  G+
Sbjct: 31  ILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPD----IVARTTLLSAYSSSGN 86

Query: 419 MADAESVFNQMP--VKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACIL 465
           +  A+ +FN  P  ++D VS+N MI           AL+LFV M +  F PD  T + +L
Sbjct: 87  VKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVL 146

Query: 466 PACASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCG---------VLVLARSL 515
            A + +A  ER  + +H  +++ G     +V NA++  YV C          ++  AR +
Sbjct: 147 SALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKV 206

Query: 516 FDMIPAKDLI--SWTIMIAGY--------------GM-----------------HGFGCD 542
           FD  P   +   SWT MIAGY              G+                  G   +
Sbjct: 207 FDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEE 266

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR------YECNIEPKLE 596
           A  TF  M   GI+ DE ++ S++ AC   G  +E    FN  R          +EP   
Sbjct: 267 AFDTFRRMHSMGIQEDEYTYTSLISAC---GSCNEKMGMFNCGRQVHGYILRTVVEPS-H 322

Query: 597 HYA-----CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
           H+       ++   ++   + EA R  + MPV  D   W ++L G      ++ A  +  
Sbjct: 323 HFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLSGYVNAQRIEEANSIFS 381

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
              E+   N   + ++ +  A+    EE  KL  ++   GL+
Sbjct: 382 ---EMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLE 420



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 40/238 (16%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           +V    ++E   +F+++    V  W +++   ++ G  +E L LF +M+S G+    Y F
Sbjct: 367 YVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAF 426

Query: 202 SCVLKCLAVVG---NSRR-----------------------------VKDAHKLFDELSD 229
           +  +   +V+G   N ++                             V+ A  +F  +  
Sbjct: 427 AGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPY 486

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
            D VSWN MI+    +G   K +E+F++M+      D  T +T+L+ C + G +  GR  
Sbjct: 487 VDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGR-- 544

Query: 290 HAFALKACFSKEISFNN----TLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 342
           H F    C    I+        L+D+  + G    A  V + M  E     W +++AG
Sbjct: 545 HYFD-TMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAG 601



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 32/289 (11%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNK 157
           +   +  C+ L SL++G+++HS +   G   D G+  G+ L+ M+  CG ++    VF  
Sbjct: 426 FAGAITACSVLGSLDNGQQIHSQVIRLGH--DSGLSAGNALITMYSRCGVVESAESVFLT 483

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +       WN ++   ++ G+  +++ LF++M    I  D  TF   L  L    ++  +
Sbjct: 484 MPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITF---LTILTACNHAGLI 540

Query: 218 KDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           K+    FD +  R  ++     +  +I      G+  K   V K M    F         
Sbjct: 541 KEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSM---PFEAGAPIWEA 597

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L+GC   G +  G       L+    ++ ++   L +MY+  G  D   RV   M ER 
Sbjct: 598 LLAGCRIHGNMELGIQAADRLLELIPGQDGTY-IILSNMYAALGQWDEVARVRLLMRERG 656

Query: 333 V-----VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
           V      SW  +          +  + +F  +V +   P+V A+ + L 
Sbjct: 657 VKKEPGCSWVEV----------ENMVHVF--LVDDARHPEVQAVYTYLQ 693


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/577 (39%), Positives = 344/577 (59%), Gaps = 11/577 (1%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           +D+ T+  +L  CA   +L+ G++ H  A+      +    N L+++Y+KCG  D A RV
Sbjct: 54  IDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRV 113

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F+ M  RS++SW +MIAGY        A++LF  M REG +   + ++S L ACA    +
Sbjct: 114 FDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAI 173

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--- 441
              K +H    +  + SS +V  A +D+YAKC  + DA  VF  MP K  V+W+++    
Sbjct: 174 IECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGF 233

Query: 442 ---GALDLFVAMLQNFEPDGV-----TMACILPACASLAALERGREIHGYILRHGISADR 493
              G  +  + + Q+ + +G+     T++ IL  CASLA +  G ++H  I++HG   + 
Sbjct: 234 VQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNL 293

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            VA ++VD+Y KCG +  +  +F  +  K+++ W  MIA +  H    +A+  F  M+Q 
Sbjct: 294 FVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQV 353

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           GI P+EV+++S+L ACSH+GLV+EG  +FN++  +   EP + HY+CMVD+L R+G   E
Sbjct: 354 GIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDE 413

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A++ ++ MP  P A++WGSLL   RIH  ++LA   AE +F LEP+N G +VLL+NVYA 
Sbjct: 414 AWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAA 473

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
           +  WE V   R+ +   G KK  G SWIE KGK+++FVAG   HP    + + L+ +  E
Sbjct: 474 SGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHE 533

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           M++  +   T+  L +    +KE  L  HSEKLA AFG+++LP    I + KNLR+CGDC
Sbjct: 534 MRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDC 593

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H   K +S    R++++RD NRFHHFKDG CSC  FW
Sbjct: 594 HSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 189/386 (48%), Gaps = 22/386 (5%)

Query: 170 MHEYSKTGNFKESLYLFKKMQSL----GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
           +HE  +    + SL + K    L    G+  D+ T + ++      G +     A ++FD
Sbjct: 59  LHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQN---DCARRVFD 115

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            +S R ++SWN MI+GY  N    + L++F  M   G  +   T+ + L  CA   A++ 
Sbjct: 116 AMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIE 175

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
            + +H  A+K             LD+Y+KC  +  A  VFE M E++ V+W+S+ AG+ +
Sbjct: 176 CKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQ 235

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G+ +  + LF+   REG++   + ++SIL  CA   L+  G  VH  I ++    +L+V
Sbjct: 236 NGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFV 295

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NF 454
           + +L+D+YAKCG +  +  VF  M  K++V WN MI           A+ LF  M Q   
Sbjct: 296 ATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGI 355

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN--AIVDMYVKCGVLVLA 512
            P+ VT   IL AC+    +E GR     +L    +A+ NV +   +VD+  + G    A
Sbjct: 356 FPNEVTYLSILSACSHTGLVEEGRHYFNLLLS-DRTAEPNVLHYSCMVDVLGRSGKTDEA 414

Query: 513 RSLFDMIPAKDLIS-WTIMIAGYGMH 537
             L D +P +   S W  ++    +H
Sbjct: 415 WKLLDKMPFEPTASMWGSLLGSSRIH 440



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 190/392 (48%), Gaps = 35/392 (8%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L   E+  ID  T   +LQLCA  +SL  GK  H +    G+V D  V  + L+ ++  C
Sbjct: 46  LVRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDT-VTCNILINLYTKC 104

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS--- 202
           G     RRVF+ +    +  WN ++  Y+      E+L LF +M   G     +T S   
Sbjct: 105 GQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTL 164

Query: 203 -------CVLKC----------------------LAVVGNSRRVKDAHKLFDELSDRDVV 233
                   +++C                      L V      +KDA  +F+ + ++  V
Sbjct: 165 CACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSV 224

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           +W+ + +G++ NG+ E+ L +F+     G  +   T+ ++LS CA+   ++ G  VHA  
Sbjct: 225 TWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVI 284

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           +K  F + +    +L+D+Y+KCG ++ +  VF  M E++VV W +MIA ++R      A+
Sbjct: 285 VKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAM 344

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD-YIKENDMQSSLYVSNALMDM 412
            LF  M + GI P+     SIL AC+  GL+E G+   +  + +   + ++   + ++D+
Sbjct: 345 ILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDV 404

Query: 413 YAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
             + G   +A  + ++MP +   S W +++G+
Sbjct: 405 LGRSGKTDEAWKLLDKMPFEPTASMWGSLLGS 436



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 102/193 (52%), Gaps = 11/193 (5%)

Query: 73  FCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           F + G  E+ + +  S+++   ++   T  SIL  CA L  + +G +VH++I + G    
Sbjct: 233 FVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFH-R 291

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           +  + + LV ++  CG +++   VF  ++   V +WN ++  +S+  +  E++ LF+KMQ
Sbjct: 292 NLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQ 351

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD-ELSDR----DVVSWNCMISGYIAN 245
            +GI  +  T+   L  L+   ++  V++    F+  LSDR    +V+ ++CM+     +
Sbjct: 352 QVGIFPNEVTY---LSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRS 408

Query: 246 GVAEKGLEVFKEM 258
           G  ++  ++  +M
Sbjct: 409 GKTDEAWKLLDKM 421


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/627 (37%), Positives = 374/627 (59%), Gaps = 14/627 (2%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + +A KLFDEL  R +V+WN MIS +I++G +++ +E +  ML  G   D  T   +   
Sbjct: 51  LAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKA 110

Query: 277 CANCGALMFGRAVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            +  G +  G+  H  A+         F  + L+DMY+K   +  A  VF ++ E+ VV 
Sbjct: 111 FSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVL 170

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           +T++I GYA+ G+   A+++F  MV  G++P+ Y +  IL  C   G L  G+ +H  + 
Sbjct: 171 FTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVV 230

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           ++ ++S +    +L+ MY++C  + D+  VFNQ+   + V+W + +           A+ 
Sbjct: 231 KSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVS 290

Query: 446 LFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           +F  M++ +  P+  T++ IL AC+SLA LE G +IH   ++ G+  ++    A++++Y 
Sbjct: 291 IFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYG 350

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG +  ARS+FD++   D+++   MI  Y  +GFG +A+  F  ++  G+ P+ V+FIS
Sbjct: 351 KCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFIS 410

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           +L AC+++GLV+EG + F  +R   NIE  ++H+ CM+DLL R+  L EA   IE +   
Sbjct: 411 ILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-N 469

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           PD  +W +LL  C+IH EV++AEKV   + EL P + G ++LL N+YA A KW +V +++
Sbjct: 470 PDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMK 529

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
             I    LKK+P  SW+++  +V+ F+AG  SHP + +I  +L  L  ++K  GY P TR
Sbjct: 530 STIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTR 589

Query: 745 YALINADEMEKEVALCGHSEKLAMAFGIL-NLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
           + L + DE +K  +L  HSEKLA+A+ +   +    TIR+ KNLRVCGDCH   KF+S  
Sbjct: 590 FVLQDLDEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLL 649

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             R+I+ RDS RFHHFK G CSC+ +W
Sbjct: 650 TGRDIIARDSKRFHHFKGGLCSCKDYW 676



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 245/486 (50%), Gaps = 49/486 (10%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y S++   A  KSL   + VH+ + +SG       LG KL+  ++ CG L E R++F+++
Sbjct: 4   YSSLIAQSAHTKSLTTLRAVHTNVIKSGF--SYSFLGHKLIDGYIKCGSLAEARKLFDEL 61

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR--- 215
            +  +  WN ++  +   G  KE++  +  M   G+  D+YTFS + K  + +G  R   
Sbjct: 62  PSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQ 121

Query: 216 ------------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                                         +++DAH +F  + ++DVV +  +I GY  +
Sbjct: 122 RAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQH 181

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
           G+  + L++F++M+N G   +  T+  +L  C N G L+ G+ +H   +K+     ++  
Sbjct: 182 GLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQ 241

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
            +LL MYS+C  ++ +I+VF ++   + V+WTS + G  + G  + A+ +FR M+R  I 
Sbjct: 242 TSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSIS 301

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P+ + ++SIL AC+   +LE+G+ +H    +  +  + Y   AL+++Y KCG+M  A SV
Sbjct: 302 PNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSV 361

Query: 426 FNQMPVKDIVSWNTMI----------GALDLFVAMLQN--FEPDGVTMACILPACASLAA 473
           F+ +   D+V+ N+MI           AL+LF   L+N    P+GVT   IL AC +   
Sbjct: 362 FDVLTELDVVAINSMIYAYAQNGFGHEALELF-ERLKNMGLVPNGVTFISILLACNNAGL 420

Query: 474 LERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           +E G +I   I   H I    +    ++D+  +   L  A  L + +   D++ W  ++ 
Sbjct: 421 VEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLN 480

Query: 533 GYGMHG 538
              +HG
Sbjct: 481 SCKIHG 486



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 189/362 (52%), Gaps = 14/362 (3%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++++  A+  +L   RAVH   +K+ FS      + L+D Y KCG L  A ++F+++  R
Sbjct: 6   SLIAQSAHTKSLTTLRAVHTNVIKSGFSYSF-LGHKLIDGYIKCGSLAEARKLFDELPSR 64

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            +V+W SMI+ +   G    A+  +  M+ EG+ PD Y  ++I  A +  GL+  G+  H
Sbjct: 65  HIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAH 124

Query: 392 DYIKENDMQS-SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--------- 441
                  ++    +V++AL+DMYAK   M DA  VF ++  KD+V +  +I         
Sbjct: 125 GLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLD 184

Query: 442 -GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL +F  M+ +  +P+  T+ACIL  C +L  L  G+ IHG +++ G+ +      ++
Sbjct: 185 GEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSL 244

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + MY +C ++  +  +F+ +   + ++WT  + G   +G    A++ F +M +  I P+ 
Sbjct: 245 LTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNP 304

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            +  S+L ACS   +++ G +  + +  +  ++      A +++L  + GN+ +A    +
Sbjct: 305 FTLSSILQACSSLAMLEVGEQ-IHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFD 363

Query: 620 MM 621
           ++
Sbjct: 364 VL 365



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 178/382 (46%), Gaps = 33/382 (8%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+ +I +  + L  +  G++ H +    G+ + DG + S LV M+     +++   V
Sbjct: 100 DAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLV 159

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL--------- 205
           F ++    V ++  L+  Y++ G   E+L +F+ M + G+  + YT +C+L         
Sbjct: 160 FRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDL 219

Query: 206 -----------------------KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                    L +      ++D+ K+F++L   + V+W   + G 
Sbjct: 220 VNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGL 279

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           + NG  E  + +F+EM+    + +  T+ ++L  C++   L  G  +HA  +K       
Sbjct: 280 VQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNK 339

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
                L+++Y KCG++D A  VF+ + E  VV+  SMI  YA+ G    A+ LF  +   
Sbjct: 340 YAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNM 399

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMAD 421
           G+ P+     SIL AC   GL+E G  +   I+ N +++ ++     ++D+  +   + +
Sbjct: 400 GLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEE 459

Query: 422 AESVFNQMPVKDIVSWNTMIGA 443
           A  +  ++   D+V W T++ +
Sbjct: 460 AAMLIEEVRNPDVVLWRTLLNS 481



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 38/200 (19%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG--VLGSKLVFMFVTCGDLKEGRRVF 155
           T  SILQ C+ L  LE G+++H+I  + G+   DG    G+ L+ ++  CG++ + R VF
Sbjct: 306 TLSSILQACSSLAMLEVGEQIHAITMKLGL---DGNKYAGAALINLYGKCGNMDKARSVF 362

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKC------- 207
           + +    V   N +++ Y++ G   E+L LF++++++G+  +  TF S +L C       
Sbjct: 363 DVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVE 422

Query: 208 -------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                    + ++G SRR+++A  L +E+ + DVV W  +++  
Sbjct: 423 EGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSC 482

Query: 243 IANGVAEKGLEVFKEMLNLG 262
             +G  E   +V  ++L L 
Sbjct: 483 KIHGEVEMAEKVMSKILELA 502


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/747 (34%), Positives = 386/747 (51%), Gaps = 94/747 (12%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL- 227
           L+H Y+ + +   +  LF         AD    S     +A    + R+  A   FD + 
Sbjct: 65  LIHLYTLSRDLPAAATLF--------CADPCPVSAT-SLVAAYAAADRLPAAVSFFDAVP 115

Query: 228 -SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMF 285
            + RD V  N +IS Y     A   + VF+ +L  G    D  +   +LS   +   +  
Sbjct: 116 PARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISV 175

Query: 286 GR--AVHAFALKACFSKEISFNNTLLDMYSKC---------------------------- 315
                +H   LK+     +S  N L+ +Y KC                            
Sbjct: 176 RHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMV 235

Query: 316 ------GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
                 GD+  A  VFE++  +  V W +MI+GY   G+   A  LFR MV E +  D +
Sbjct: 236 VGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEF 295

Query: 370 AITSILHACACDGLLEIGKDVHDYI---KENDM-QSSLYVSNALMDMYAKCGSMADAESV 425
             TS+L ACA  GL   GK VH  I   + N + +++L V+NAL+  Y+KCG++A A  +
Sbjct: 296 TFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRI 355

Query: 426 FNQMPVKDIVSWNTMIG-----------------------------------------AL 444
           F+ M +KD+VSWNT++                                          AL
Sbjct: 356 FDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDAL 415

Query: 445 DLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            LF  M  +N +P   T A  + AC  L AL+ G+++HG+I++ G     +  NA++ MY
Sbjct: 416 KLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMY 475

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            +CG +  A  +F ++P  D +SW  MI+  G HG G +A+  F+ M   GI PD +SF+
Sbjct: 476 ARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFL 535

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           +VL AC+HSGLVDEG+R+F  M+ +  I P  +HY  ++DLL R G + EA   I+ MP 
Sbjct: 536 TVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPF 595

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            P  +IW ++L GCR   +++L    A+ +F++ P + G Y+LL+N Y+ A  W +  ++
Sbjct: 596 EPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARV 655

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R+ +  RG+KK PGCSWIE   KV++F+ G + HP A ++   L+ +  +M++ GY P T
Sbjct: 656 RKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDT 715

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
           +  L + +  +KE  L  HSE+LA+ FG+LNLP G T+ V KNLR+C DCH    FMSK 
Sbjct: 716 KVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKA 775

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             REIV+RD  RFHHFKDG CSC  +W
Sbjct: 776 VGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 168/383 (43%), Gaps = 45/383 (11%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII- 122
           +NA I  +   G   +A E+      E+  +D  T+ S+L  CA++     GK VH  I 
Sbjct: 262 WNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQII 321

Query: 123 -CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
             +   V +  + + + LV  +  CG++   RR+F+ +    V  WN ++  Y ++    
Sbjct: 322 RLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVES---- 377

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                SC+ K + V             F+E+  ++ +SW  M+S
Sbjct: 378 ---------------------SCLDKAVEV-------------FEEMPYKNELSWMVMVS 403

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY+  G AE  L++F +M +        T    ++ C   GAL  G+ +H   ++  F  
Sbjct: 404 GYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEG 463

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
             S  N L+ MY++CG +  A  +F  M     VSW +MI+   + G    A+ LF  MV
Sbjct: 464 SNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMV 523

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSM 419
            EGI PD  +  ++L AC   GL++ G    + +K +  +         L+D+  + G +
Sbjct: 524 AEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRI 583

Query: 420 ADAESVFNQMPVKDIVS-WNTMI 441
            +A  +   MP +   S W  ++
Sbjct: 584 GEARDLIKTMPFEPTPSIWEAIL 606



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 106/250 (42%), Gaps = 13/250 (5%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           SE  K    TY   +  C +L +L+ GK++H  I + G    +   G+ L+ M+  CG +
Sbjct: 423 SENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSA-GNALITMYARCGAV 481

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           KE   +F  + N     WN ++    + G+ +E+L LF +M + GI  D  +F   L  L
Sbjct: 482 KEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISF---LTVL 538

Query: 209 AVVGNSRRVKDAHKLFDELS-DRDVVSWNCMISGYI-ANGVAEKGLEVFKEMLNLGFNVD 266
               +S  V +  + F+ +  D  ++      +  I   G A +  E    +  + F   
Sbjct: 539 TACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPT 598

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT---LLDMYSKCGDLDGAIR 323
            +    +LSGC   G +  G    A A    F      + T   L + YS  G    A R
Sbjct: 599 PSIWEAILSGCRTSGDMELG----AHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAAR 654

Query: 324 VFEKMGERSV 333
           V + M +R V
Sbjct: 655 VRKLMRDRGV 664


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/623 (37%), Positives = 363/623 (58%), Gaps = 20/623 (3%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +F  L +     +N +I    ++    + L ++  ML  G   D  T   V+  C  
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
                FG  VH   +K+ F  +    ++L+ +Y+   DL  A ++F     R VVSW +M
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I GY +      A  +F  MV      DV +  ++++  A  G ++  K + D + E ++
Sbjct: 268 IDGYVKHVEMGHARMVFDRMVCR----DVISWNTMINGYAIVGKIDEAKRLFDEMPERNL 323

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
            S     N+++  + KCG++ DA  +F++MP +D+VSWN+M+           AL LF  
Sbjct: 324 VSW----NSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQ 379

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M     +P   T+  +L ACA L AL++G  +H YI  + I  +  V  A+VDMY KCG 
Sbjct: 380 MRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGK 439

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           + LA  +F+ + +KD+++W  +IAG  +HG   +A   F +M++AG+EP++++F+++L A
Sbjct: 440 ISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSA 499

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSH+G+VDEG +  + M     IEPK+EHY C++DLL+R G L EA   I  MP+ P+ +
Sbjct: 500 CSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPS 559

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
             G+LL GCRIH   +L E V + +  L+P ++G Y+LL+N+YA A+KW++ +K+R  + 
Sbjct: 560 ALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMK 619

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE-GYFPKTRYAL 747
             G+ K PG S IE+KG V+ FVAG  SHP + KI   L  +   +K   GY   T   L
Sbjct: 620 VNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVL 679

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
           ++ +E +KE AL  HSEKLA+A+G+L+L + + IR+ KNLRVC DCH + K +SK   RE
Sbjct: 680 LDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGRE 739

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           I++RD NRFHHF+DG CSC  FW
Sbjct: 740 IIVRDRNRFHHFEDGECSCLDFW 762



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 208/445 (46%), Gaps = 50/445 (11%)

Query: 50  PISASISKTLVCKTKN-----YNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSI 102
           P   + +KT+    +N     YN+ I          +A+ + ++  +S  K D  TY  +
Sbjct: 142 PTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFV 201

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           ++ C +      G  VH+ + +SG   D  ++ S L+ ++    DL   +++FN      
Sbjct: 202 IKACNESSVTWFGLLVHTHVVKSGFECDSYIV-SSLIHLYANGKDLGAAKQLFNLCSARD 260

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
           V  WN ++  Y K      +  +F +M    +  D  +++ ++   A+VG   ++ +A +
Sbjct: 261 VVSWNAMIDGYVKHVEMGHARMVFDRM----VCRDVISWNTMINGYAIVG---KIDEAKR 313

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAE-------------------------------KG 251
           LFDE+ +R++VSWN M++G++  G  E                               + 
Sbjct: 314 LFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEA 373

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           L +F +M  +G     AT+V++LS CA+ GAL  G  +H +               L+DM
Sbjct: 374 LALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDM 433

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+KCG +  A +VF  M  + V++W ++IAG A  G    A +LF+ M   G+EP+    
Sbjct: 434 YAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITF 493

Query: 372 TSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
            +IL AC+  G+++ G+ + D +  +  ++  +     ++D+ A+ G + +A  +   MP
Sbjct: 494 VAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMP 553

Query: 431 VKDIVSWNTMIGALDLFVAMLQNFE 455
           ++   S    +GAL     +  NFE
Sbjct: 554 MEPNPS---ALGALLGGCRIHGNFE 575


>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/571 (40%), Positives = 335/571 (58%), Gaps = 18/571 (3%)

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY--SKCGDLDGAIRVFEKMGERSVVS 335
            +C ++   +  HA  L+        F++ L+     S  GDL+ A ++F +M       
Sbjct: 19  THCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFI 78

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
             +MI GYAR      A+ L+  MV  G+  D Y    +L ACA  G +++G+  H  + 
Sbjct: 79  CNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVL 138

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LD 445
           +N   S L+V NAL+  Y  CGS   A  VF++  V+D+V+WN MI A           D
Sbjct: 139 KNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFD 198

Query: 446 LFVAM--LQNFEPDGVTMACILPACASLAALERGREIHGY---ILRHGISADRNVANAIV 500
           L   M  L N  PD VTM  ++PACA L  LERG+ +H Y   + +  I+ D  +  A+V
Sbjct: 199 LLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALV 258

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY KCG + LA  +F  +  +++ +W  +I G  MHG G DAI+ F+ M    + PD+V
Sbjct: 259 DMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDV 318

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +FI++L ACSH+GLVDEG   F  M+ +  IEP++EHY C+VDLL R   + +A  FIE 
Sbjct: 319 TFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIEN 378

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+  ++ +W +LL  CR      LAEK+   V ELEPD+ G YV+L+N+YA   +W+  
Sbjct: 379 MPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHA 438

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE-GY 739
            KLR+++  +G++K PGCSWIE+ G ++ FVAG  SH   ++I ++++ +   +  + G+
Sbjct: 439 LKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGH 498

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P T   L + +E EKE +L  HSEKLA+A G+++ P+G  IR+ KNLRVC DCH   K 
Sbjct: 499 VPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKV 558

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            SK   REIV RD +RFHHFK+G CSC  FW
Sbjct: 559 TSKVYNREIVARDRSRFHHFKEGSCSCMDFW 589



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 144/292 (49%), Gaps = 15/292 (5%)

Query: 201 FSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
           FS  L     + +S  +  A KLF ++ + D    N MI GY  +    + + ++  M+ 
Sbjct: 45  FSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVE 104

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
            G  VD  T   VL+ CA  GA+  GR  H   LK  F  ++   N L+  Y  CG    
Sbjct: 105 RGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGC 164

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACA 379
           A  VF++   R VV+W  MI  +  +G+ + A  L   M + + + PD   + S++ ACA
Sbjct: 165 ACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACA 224

Query: 380 CDGLLEIGKDVHDYIKEND---MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
             G LE GK +H Y KE D   +   L +  AL+DMYAKCGS+  A  VF +M V+++ +
Sbjct: 225 QLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFT 284

Query: 437 WNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERG 477
           WN +IG          A+ LF  M  +   PD VT   +L AC+    ++ G
Sbjct: 285 WNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG 336



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 139/326 (42%), Gaps = 46/326 (14%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D  TY  +L  CA L +++ G++ H  + ++G   D  V+ + L+  +  CG       
Sbjct: 109 VDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINA-LIQFYHNCGSFGCACD 167

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL-GIAADSYTFSCVLKCLAVVG 212
           VF++     V  WN++++ +   G  +++  L  +M  L  +  D  T   ++   A +G
Sbjct: 168 VFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLG 227

Query: 213 NSRRVKDAH-----------------------------------KLFDELSDRDVVSWNC 237
           N  R K  H                                   ++F  +  R+V +WN 
Sbjct: 228 NLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNA 287

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I G   +G  E  + +F +M +     D  T + +L  C++ G +  G A+   A+K  
Sbjct: 288 LIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMKNK 346

Query: 298 FSKEISFNN--TLLDMYSKCGDLDGAIRVFEKMGERS-VVSWTSMIAGYAREGVFDGAIR 354
           F  E    +   ++D+  +   +D A+   E M  ++  V W +++      G FD A +
Sbjct: 347 FQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEK 406

Query: 355 LFRGMVREGIEPDV---YAITSILHA 377
           + R ++   +EPD    Y + S L+A
Sbjct: 407 IGRRVIE--LEPDSCGRYVMLSNLYA 430



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 9/148 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDT-----KTYCSILQLCADLKSLEDGKKVH 119
            +N  I      G  EKA ++L   E +K+D       T  S++  CA L +LE GK +H
Sbjct: 179 TWNIMINAHLNKGLSEKAFDLL--DEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLH 236

Query: 120 SIICE-SGIVID-DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
           S   E     I+ D VL + LV M+  CG +    +VF ++    VF WN L+   +  G
Sbjct: 237 SYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHG 296

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVL 205
           + ++++ LF +M+   +  D  TF  +L
Sbjct: 297 HGEDAISLFDQMEHDKLMPDDVTFIALL 324


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 264/820 (32%), Positives = 426/820 (51%), Gaps = 59/820 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  +   G+  +A+E+  +   E    D  +  +IL   A L  L  G+  H  +
Sbjct: 8   SWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRTV 67

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
           CE+  +  D V+ + ++ M+  CG +   RR F+ +    V  W+ ++  Y++ G+  ++
Sbjct: 68  CEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDA 127

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA-------------------------VVGNS--- 214
           L LF +M   G+ A++ TF  VL   A                         ++GN+   
Sbjct: 128 LELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVN 187

Query: 215 -----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                  V  A ++F+ +  ++ V+WN MI+    +   ++   +  EM   G   +  T
Sbjct: 188 MYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKIT 247

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V+V+  CA   +++ GR VH          + +  N L+++Y KCG L  A    E + 
Sbjct: 248 LVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIE 307

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            R  +SWT+++A YAR G    AI + + M  EG++ D +   ++L +C     L +G++
Sbjct: 308 TRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEE 367

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTMIGA----- 443
           +HD + E+ ++    +  AL+DMY KCG+   A   F++M  V+D+  WN ++ A     
Sbjct: 368 IHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRD 427

Query: 444 -----LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                L +F  M LQ   PD VT   IL ACASLAAL  GR  H  +L  G+   + VA+
Sbjct: 428 QGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVAS 487

Query: 498 A------IVDMYVKCGVLVLARSLF---DMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
           A      +++MY KCG L  A++ F       A D+++W+ M+A Y   G   +A+  F 
Sbjct: 488 ADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFY 547

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            M+Q G++PD VSF+S +  CSHSGLV E   FF  +R++  I P   H+AC+VDLLSR 
Sbjct: 548 SMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRA 607

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           G + EA   +   P+    + W +LL  CR + +++ A +VA  +  L   +   Y LLA
Sbjct: 608 GWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAARLASLRSGSA--YSLLA 665

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS-HPHAKKIESLL 727
           +V+  + KW++V+  R+ +  RG    PGCSWIEI  +V  F AG     P  ++I + L
Sbjct: 666 SVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAEL 725

Query: 728 KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNL 787
           +RL +E+++ GY       + +  E EK+  L  HSEK+A+ FG+++ P G  +R+ KN+
Sbjct: 726 ERLCVEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVKNI 785

Query: 788 RVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
            VC DCHE+ K +S+ A R I LRD   FH F  G CSC+
Sbjct: 786 GVCQDCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSCK 825



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/421 (32%), Positives = 215/421 (51%), Gaps = 14/421 (3%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           ++DR   SWN  I+ Y  NG   + LE+F+ M   G   D  + + +L   A+ G L  G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 287 RAVHAFALKAC-FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
              H    +A     ++     +L MY++CG +  A R F+ M  R+VVSW++MIA YA+
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND-MQSSLY 404
            G    A+ LF  M  EG++ +     S+L ACA    + +GK +H+ I  +  +   + 
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL-------DLFVAM----LQN 453
           + N +++MY KCG +  A  VF +M  K+ V+WNTMI A        + F  +    L  
Sbjct: 181 LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDG 240

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
             P+ +T+  ++ ACA + ++ RGR +H  +   G+ +D  VANA+V++Y KCG L  AR
Sbjct: 241 LRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAAR 300

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
              + I  +D ISWT ++A Y  HG G  AIA    M   G++ D  +F+++L +C    
Sbjct: 301 HALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIA 360

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
            +  G    + +  E  IE        +VD+  + GN   A R  + M    D T+W +L
Sbjct: 361 ALALGEEIHDRL-AESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNAL 419

Query: 634 L 634
           L
Sbjct: 420 L 420



 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 222/453 (49%), Gaps = 46/453 (10%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------- 216
           F WNL + EY++ G+   +L +F+ M   G+A D  +   +L   A +G+  +       
Sbjct: 7   FSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRT 66

Query: 217 --------------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
                                     V  A + FD +  R+VVSW+ MI+ Y   G    
Sbjct: 67  VCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGD 126

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA-FALKACFSKEISFNNTLL 309
            LE+F  M + G   +  T V+VL  CA+  A+  G+++H           ++   NT++
Sbjct: 127 ALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIV 186

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           +MY KCG++D A  VFE+M  ++ V+W +MIA  +R   +  A  L   M  +G+ P+  
Sbjct: 187 NMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKI 246

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            + S++ ACA    +  G+ VH+ +    ++S   V+NAL+++Y KCG +  A      +
Sbjct: 247 TLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGI 306

Query: 430 PVKDIVSWNTMIGALDLF------VAMLQNFEPDGV-----TMACILPACASLAALERGR 478
             +D +SW T++ A          +A+++  + +GV     T   +L +C ++AAL  G 
Sbjct: 307 ETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGE 366

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD-MIPAKDLISWTIMIAGYGMH 537
           EIH  +   GI  D  +  A+VDMY KCG    AR  FD M   +D+  W  ++A Y + 
Sbjct: 367 EIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLR 426

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
             G + +  F  M   G+ PD V+F+S+L AC+
Sbjct: 427 DQGKETLGIFARMSLQGVAPDAVTFLSILDACA 459



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 170/332 (51%), Gaps = 15/332 (4%)

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M +RS  SW   IA YAR G    A+ +FR M  EG+ PD  +  +IL A A  G L  G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 388 KDVHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
           +  H  + E + + S + V+ A++ MY +CGS++ A   F+ M V+++VSW+ MI     
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 443 ------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 AL+LFV M  +  + + +T   +L ACAS+ A+  G+ IH  I+  G+  D  +
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180

Query: 496 -ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
             N IV+MY KCG + LAR +F+ + AK+ ++W  MIA    H    +A A   +M   G
Sbjct: 181 LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDG 240

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           + P++++ +SV+ AC+    +  G     ++  E  +E        +V+L  + G L  A
Sbjct: 241 LRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGE-GLESDNTVANALVNLYGKCGKLRAA 299

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
              +E +    D   W +LL     H   K A
Sbjct: 300 RHALEGIET-RDKISWTTLLAAYARHGHGKRA 330


>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
 gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 681

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/599 (39%), Positives = 351/599 (58%), Gaps = 17/599 (2%)

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G     L VF+  L      D  T    LS CA  G L  G +V   A  A +  ++  
Sbjct: 87  RGSPASALRVFRA-LPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFV 145

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            ++LL +Y++ G +  A++VF +M  R  V+W++M+AG+   G    AI+++R M  +G+
Sbjct: 146 CSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGV 205

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           + D   +  ++ AC     + +G  VH ++  + M+  +  + +L+DMYAK G +  A  
Sbjct: 206 KGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACR 265

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAA 473
           VF  M  ++ VSW+ MI           AL LF  M     +PD   +   L AC+++  
Sbjct: 266 VFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGF 325

Query: 474 LERGREIHGYILRHGISADRN--VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           L+ GR +HG+I+R     D N  +  A +DMY KCG L  A+ LF+MI  +DLI W  MI
Sbjct: 326 LKLGRSVHGFIVRR---FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMI 382

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           A  G HG G DA+  F +M + G+ PD  +F S+L A SHSGLV+EG  +F  M     I
Sbjct: 383 ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKI 442

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P  +HY C+VDLL+R+G + EA   +  M   P   IW +LL GC  + +++L E +A+
Sbjct: 443 TPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIAD 502

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
           ++ EL+PD+ G   L++N+YA  +KW++V+++R+ +   G KK PGCS IEI+G  ++FV
Sbjct: 503 NILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFV 562

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFG 771
               SHP  ++I S + +L LEM++ GY P+T +   + +E  KE  L  HSE+LA+AFG
Sbjct: 563 MEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFG 622

Query: 772 ILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +LN   G  + + KNLRVCGDCH+  K++SK A REIV+RD+ RFHHFKDG CSCR +W
Sbjct: 623 LLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 194/381 (50%), Gaps = 17/381 (4%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
           + L +   ++ G+ +    +  +    G   D +  S +L   A  G    + DA K+F 
Sbjct: 111 FTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGA---MGDAVKVFV 167

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            +  RD V+W+ M++G+++ G     +++++ M   G   D   M+ V+  C     +  
Sbjct: 168 RMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRM 227

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G +VH   L+     ++    +L+DMY+K G LD A RVF  M  R+ VSW++MI+G+A+
Sbjct: 228 GASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQ 287

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G  D A+RLFR M   GI+PD  A+ S L AC+  G L++G+ VH +I       +  +
Sbjct: 288 NGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCIL 346

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-F 454
             A +DMY+KCGS+A A+ +FN +  +D++ WN MI           AL LF  M +   
Sbjct: 347 GTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGM 406

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIVDMYVKCGVLVLAR 513
            PD  T A +L A +    +E G+   G ++ H  I+        +VD+  + G++  A 
Sbjct: 407 RPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEAS 466

Query: 514 SLFDMIPAKDLIS-WTIMIAG 533
            L   + A+  ++ W  +++G
Sbjct: 467 DLLTSMKAEPTVAIWVALLSG 487



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 171/387 (44%), Gaps = 42/387 (10%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           ++ D+ T+   L  CA L  L  G+ V     ++G   DD  + S L+ ++   G + + 
Sbjct: 104 ARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYK-DDVFVCSSLLHLYARWGAMGDA 162

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
            +VF ++       W+ ++  +   G   +++ ++++M+  G+  D      V++     
Sbjct: 163 VKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAA 222

Query: 212 GNSRRVKDAH--------------------------------KLFDELSDRDVVSWNCMI 239
            N R     H                                ++F  +  R+ VSW+ MI
Sbjct: 223 RNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMI 282

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           SG+  NG +++ L +F+ M   G   D   +V+ L  C+N G L  GR+VH F ++  F 
Sbjct: 283 SGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FD 341

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                    +DMYSKCG L  A  +F  + +R ++ W +MIA     G    A+ LF+ M
Sbjct: 342 FNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEM 401

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGK----DVHDYIKENDMQSSLYVSNALMDMYAK 415
              G+ PD     S+L A +  GL+E GK     + ++ K    +   YV   L+D+ A+
Sbjct: 402 NETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKH-YV--CLVDLLAR 458

Query: 416 CGSMADAESVFNQMPVKDIVS-WNTMI 441
            G + +A  +   M  +  V+ W  ++
Sbjct: 459 SGLVEEASDLLTSMKAEPTVAIWVALL 485



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 42/287 (14%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D      ++Q C   +++  G  VH  +   G+ +D  V  + LV M+   G L    
Sbjct: 206 KGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMD-VVTATSLVDMYAKNGLLDVAC 264

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS-------------- 198
           RVF  + +     W+ ++  +++ G   E+L LF+ MQ+ GI  DS              
Sbjct: 265 RVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIG 324

Query: 199 ---------------YTFSCVLKCLAVVGNSR--RVKDAHKLFDELSDRDVVSWNCMISG 241
                          + F+C+L   A+   S+   +  A  LF+ +SDRD++ WN MI+ 
Sbjct: 325 FLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIAC 384

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL-----SGCANCGALMFGRAVHAFALKA 296
             A+G  +  L +F+EM   G   D AT  ++L     SG    G L FGR V+ F +  
Sbjct: 385 CGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITP 444

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAG 342
                +     L+D+ ++ G ++ A  +   M  E +V  W ++++G
Sbjct: 445 AEKHYV----CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSG 487



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 111/233 (47%), Gaps = 17/233 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           +++A I  F + G  ++A+ +  + + S I  D+    S L  C+++  L+ G+ VH  I
Sbjct: 277 SWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFI 336

Query: 123 CESGIVID-DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
                  D + +LG+  + M+  CG L   + +FN I +  + +WN ++      G  ++
Sbjct: 337 VRR---FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQD 393

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WN 236
           +L LF++M   G+  D  TF+ +L  L+   +S  V++    F  + +   ++     + 
Sbjct: 394 ALTLFQEMNETGMRPDHATFASLLSALS---HSGLVEEGKLWFGRMVNHFKITPAEKHYV 450

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           C++     +G+ E+  ++   M        +A  V +LSGC N   L  G ++
Sbjct: 451 CLVDLLARSGLVEEASDLLTSM---KAEPTVAIWVALLSGCLNNKKLELGESI 500


>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Glycine max]
          Length = 650

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/576 (40%), Positives = 354/576 (61%), Gaps = 21/576 (3%)

Query: 274 LSGCANCGALMFGRAVHAFALKAC--FSKEISFNNTLLDMYSKCGDLDGAIRVF----EK 327
           L  C +  +L  GR +H   L++     +  +    L+ +YS CG ++ A RVF    EK
Sbjct: 77  LHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEK 136

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
             E  V  W +M  GY+R G    A+ L+R M+   ++P  +A +  L AC+      +G
Sbjct: 137 PPEEPV--WVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVG 194

Query: 388 KDVHDYIKENDM-QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----- 441
           + +H  I ++D+ ++   V+NAL+ +Y + G   +   VF +MP +++VSWNT+I     
Sbjct: 195 RAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAG 254

Query: 442 -GALDLFVAMLQNFEPDG-----VTMACILPACASLAALERGREIHGYILRHGISADRNV 495
            G +   ++  +  + +G     +T+  +LP CA + AL  G+EIHG IL+   +AD  +
Sbjct: 255 QGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPL 314

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            N+++DMY KCG +     +FD + +KDL SW  M+AG+ ++G   +A+  F++M + GI
Sbjct: 315 LNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGI 374

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           EP+ ++F+++L  CSHSGL  EG R F+ +  +  ++P LEHYAC+VD+L R+G   EA 
Sbjct: 375 EPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEAL 434

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
              E +P+ P  +IWGSLL  CR++  V LAE VAE +FE+EP+N G YV+L+N+YA A 
Sbjct: 435 SVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAG 494

Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH-AKKIESLLKRLRLEM 734
            WE+VK++RE ++  G+KK+ GCSWI+IK K++ FVAGGSS    + + + +   L   +
Sbjct: 495 MWEDVKRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKIWNELSNAV 554

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           K  GY P T   L + +E  K V +C HSE+LA  F ++N  AG  IR+TKNLRVC DCH
Sbjct: 555 KNLGYVPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLRVCVDCH 614

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              K +SK  RR IVLRD+NRFHHF++G CSC+ +W
Sbjct: 615 SWMKAVSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 229/458 (50%), Gaps = 47/458 (10%)

Query: 33  TLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKS 92
           +LP  ++ K++ + T  P     + T   KT  +N+ +   C+ GNL+KA+ ++ SS+ +
Sbjct: 6   SLPTNITVKTNITATSTP---RTTNTHKHKTTPFNSTLKSLCKWGNLDKALRLIESSKPT 62

Query: 93  KI----DTKTYCSILQLCADLKSLEDGKKVH-SIICESGIVIDDGVLGSKLVFMFVTCGD 147
            I    + ++    L  C   +SLE G+K+H  ++     V+++  L +KL+ ++  CG 
Sbjct: 63  PIEEEEEEESISLFLHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGR 122

Query: 148 LKEGRRVFNKIDNGKV---FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
           + E RRVF +ID+ K     +W  +   YS+ G   E+L L++ M S  +   ++ FS  
Sbjct: 123 VNEARRVF-QIDDEKPPEEPVWVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMA 181

Query: 205 LKCLAVVGNSRRVKDAH---------------------------------KLFDELSDRD 231
           LK  + + N+   +  H                                 K+F+E+  R+
Sbjct: 182 LKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRN 241

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           VVSWN +I+G+   G   + L  F+ M   G      T+ T+L  CA   AL  G+ +H 
Sbjct: 242 VVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHG 301

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
             LK+  + ++   N+L+DMY+KCG++    +VF++M  + + SW +M+AG++  G    
Sbjct: 302 QILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHE 361

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALM 410
           A+ LF  M+R GIEP+     ++L  C+  GL   GK +   + ++  +Q SL     L+
Sbjct: 362 ALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLV 421

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALDLF 447
           D+  + G   +A SV   +P++   S W +++ +  L+
Sbjct: 422 DILGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRLY 459



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 195/390 (50%), Gaps = 25/390 (6%)

Query: 216 RVKDAHKLF---DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           RV +A ++F   DE    + V W  M  GY  NG + + L ++++ML+            
Sbjct: 122 RVNEARRVFQIDDEKPPEEPV-WVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSM 180

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSK-EISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
            L  C++    + GRA+HA  +K    + +   NN LL +Y + G  D  ++VFE+M +R
Sbjct: 181 ALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQR 240

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           +VVSW ++IAG+A +G     +  FR M REG+      +T++L  CA    L  GK++H
Sbjct: 241 NVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIH 300

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
             I ++   + + + N+LMDMYAKCG +   E VF++M  KD+ SWNTM+          
Sbjct: 301 GQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIH 360

Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAI 499
            AL LF  M++   EP+G+T   +L  C+       G+ +   +++  G+         +
Sbjct: 361 EALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACL 420

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           VD+  + G    A S+ + IP +   S W  ++    +  +G  A+A     R   IEP+
Sbjct: 421 VDILGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRL--YGNVALAEVVAERLFEIEPN 478

Query: 559 EVS---FISVLYACSHSGLVDEGWRFFNMM 585
                  +S +YA  ++G+ ++  R   MM
Sbjct: 479 NPGNYVMLSNIYA--NAGMWEDVKRVREMM 506



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 166/354 (46%), Gaps = 24/354 (6%)

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY--AITSILHACACDGLLEIGKDVHDY 393
           + S +    + G  D A+RL        IE +    +I+  LHAC     LE G+ +H +
Sbjct: 36  FNSTLKSLCKWGNLDKALRLIESSKPTPIEEEEEEESISLFLHACISRRSLEHGRKLHLH 95

Query: 394 I--KENDMQSSLYVSNALMDMYAKCGSMADAESVF---NQMPVKDIVSWNTMIG------ 442
           +   +N +  +  +   L+ +Y+ CG + +A  VF   ++ P ++ V     IG      
Sbjct: 96  LLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPVWVAMAIGYSRNGF 155

Query: 443 ---ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGI-SADRNVAN 497
              AL L+  ML    +P     +  L AC+ L     GR IH  I++H +  AD+ V N
Sbjct: 156 SHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNN 215

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           A++ +YV+ G       +F+ +P ++++SW  +IAG+   G   + ++ F  M++ G+  
Sbjct: 216 ALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGF 275

Query: 558 DEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
             ++  ++L  C+    +  G      +++   N +  L     ++D+ ++ G +    +
Sbjct: 276 SWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPL--LNSLMDMYAKCGEIGYCEK 333

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV--FELEPDNTGYYVLLA 668
             + M  + D T W ++L G  I+ ++  A  + + +  + +EP+   +  LL+
Sbjct: 334 VFDRMH-SKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLS 386


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/568 (39%), Positives = 340/568 (59%), Gaps = 12/568 (2%)

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           ++ C    AL  GR VHA  + A +   +     L+ MY +CG LD A  V ++M ERSV
Sbjct: 17  ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSV 76

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSWT+MI+GY++      A+ LF  M+R G  P+ Y + ++L +C+    +  GK VH  
Sbjct: 77  VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 136

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           + + + +S ++V ++L+DMYAK  ++ +A  VF+ +P +D+VS   +I           A
Sbjct: 137 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 196

Query: 444 LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           LDLF  +  +  + + VT   ++ A + LA+L+ G+++H  ILR  +     + N+++DM
Sbjct: 197 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDM 256

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG L+ +R +FD +  + ++SW  M+ GYG HG G + I+ F D+ +  ++PD V+ 
Sbjct: 257 YSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTL 315

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           ++VL  CSH GLVDEG   F+ +  E +      HY C++DLL R+G L +A   IE MP
Sbjct: 316 LAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMP 375

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
                +IWGSLL  CR+H  V + E VA+ + E+EP+N G YV+L+N+YA A  W++V K
Sbjct: 376 FESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFK 435

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R+ +  + + K PG SWI +   ++ F +    HP  K I + +K + +++K  G+ P 
Sbjct: 436 VRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPD 495

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
               L + D+ +KE  L GHSEKLA+ FG++N P G TIRV KNLR+C DCH  AKF+SK
Sbjct: 496 LSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSK 555

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REI LRD NRFH    G C+C  +W
Sbjct: 556 VYEREISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 197/381 (51%), Gaps = 40/381 (10%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y + +  C + ++L +G++VH+ +  +        LG++LV M+V CG L + R V +++
Sbjct: 13  YEAAITACIERRALWEGRQVHARMI-TARYRPAVFLGTRLVTMYVRCGALDDARNVLDRM 71

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----------- 207
               V  W  ++  YS+T    E+L LF KM   G   + YT + VL             
Sbjct: 72  PERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGK 131

Query: 208 ---------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                                L +   S  +++A ++FD L +RDVVS   +ISGY   G
Sbjct: 132 QVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKG 191

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           + E+ L++F+++ + G   +  T  T+++  +   +L +G+ VHA  L+      ++  N
Sbjct: 192 LDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN 251

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           +L+DMYSKCG L  + RVF+ M ERSVVSW +M+ GY R G+    I LF+ + +E ++P
Sbjct: 252 SLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKP 310

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS---NALMDMYAKCGSMADAE 423
           D   + ++L  C+  GL++ G D+ D + +   QS+L  +     ++D+  + G +  A 
Sbjct: 311 DSVTLLAVLSGCSHGGLVDEGLDIFDTVVKE--QSALLHTGHYGCIIDLLGRSGRLEKAL 368

Query: 424 SVFNQMPVKDIVS-WNTMIGA 443
           ++   MP +   S W +++GA
Sbjct: 369 NLIENMPFESTPSIWGSLLGA 389



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 181/335 (54%), Gaps = 14/335 (4%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + DA  + D + +R VVSW  MISGY       + L++F +ML  G   +  T+ TVL+ 
Sbjct: 61  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C+   ++  G+ VH+  +K  F   +   ++LLDMY+K  ++  A RVF+ + ER VVS 
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 180

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T++I+GYA++G+ + A+ LFR +  EG++ +    T+++ A +    L+ GK VH  I  
Sbjct: 181 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDL 446
            ++   + + N+L+DMY+KCG +  +  VF+ M  + +VSWN M+            + L
Sbjct: 241 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISL 300

Query: 447 FVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN--AIVDMYV 504
           F  + +  +PD VT+  +L  C+    ++ G +I   +++   SA  +  +   I+D+  
Sbjct: 301 FKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQ-SALLHTGHYGCIIDLLG 359

Query: 505 KCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
           + G L  A +L + +P +   S W  ++    +H 
Sbjct: 360 RSGRLEKALNLIENMPFESTPSIWGSLLGACRVHA 394



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 153/300 (51%), Gaps = 18/300 (6%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M   G     +   + + AC     L  G+ VH  +     + ++++   L+ MY +CG+
Sbjct: 1   MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPA 467
           + DA +V ++MP + +VSW TMI           ALDLF+ ML+    P+  T+A +L +
Sbjct: 61  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C+   ++ +G+++H  +++    +   V ++++DMY K   +  AR +FD +P +D++S 
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 180

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM-MR 586
           T +I+GY   G   +A+  F  +   G++ + V+F +++ A S    +D G +   + +R
Sbjct: 181 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH---HEV 643
            E      L++   ++D+ S+ G L  + R  + M +      W ++L G   H   HEV
Sbjct: 241 KELPFFVALQN--SLIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAMLMGYGRHGLGHEV 297



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 130/279 (46%), Gaps = 36/279 (12%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  ++L  C+  +S+  GK+VHS++ ++        +GS L+ M+    +++E RRVF+ 
Sbjct: 113 TLATVLTSCSGPQSIYQGKQVHSLLVKTNFE-SHMFVGSSLLDMYAKSENIQEARRVFDT 171

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +    V     ++  Y++ G  +E+L LF+++ S G+  +  TF+ ++  L+ + +    
Sbjct: 172 LPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYG 231

Query: 218 KDAHKL--------------------------------FDELSDRDVVSWNCMISGYIAN 245
           K  H L                                FD + +R VVSWN M+ GY  +
Sbjct: 232 KQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRH 291

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS-KEISF 304
           G+  + + +FK+ L+     D  T++ VLSGC++ G +  G  +    +K   +      
Sbjct: 292 GLGHEVISLFKD-LHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGH 350

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAG 342
              ++D+  + G L+ A+ + E M   S  S W S++  
Sbjct: 351 YGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGA 389



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 18/276 (6%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
            A I  + + G  E+A+++     SE  + +  T+ +++   + L SL+ GK+VH++I  
Sbjct: 181 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
             +      L + L+ M+  CG L   RRVF+ +    V  WN ++  Y + G   E + 
Sbjct: 241 KELPFFVA-LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVIS 299

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVV-----SWNCMI 239
           LFK +    +  DS T   VL   +  G    V +   +FD +            + C+I
Sbjct: 300 LFKDLHK-EVKPDSVTLLAVLSGCSHGG---LVDEGLDIFDTVVKEQSALLHTGHYGCII 355

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
                +G  EK L + +   N+ F    +   ++L  C     +  G  V    L+    
Sbjct: 356 DLLGRSGRLEKALNLIE---NMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLE--ME 410

Query: 300 KEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSVV 334
            E + N  +L ++Y+  G      +V + M E++V 
Sbjct: 411 PENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVT 446


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/575 (39%), Positives = 341/575 (59%), Gaps = 12/575 (2%)

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
           ++   ++L  C    A+  G+ +HA   +   S        L+++Y  C  L  A  +F+
Sbjct: 1   MSYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFD 60

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
           ++ +R++  W  MI GYA  G ++ AI L+  M   G+ PD +    +L AC+    +E 
Sbjct: 61  RISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEE 120

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----- 441
           GK +H  +  + ++S ++V  AL+DMYAKCG +  A  VF+++  +D+V WN+M+     
Sbjct: 121 GKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQ 180

Query: 442 -GALDLFVAM-----LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
            G  D  +A+         +P   T    + A A    L +G+E+HGY  RHG  ++  V
Sbjct: 181 NGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKV 240

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
             A++DMY K G + +ARSLF+++  K ++SW  MI GY MHG   +A+  F +M+   +
Sbjct: 241 KTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMK-GKV 299

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
            PD ++F+ VL ACSH GL++EG   F  M  + NI P ++HY CM+DLL   G L EAY
Sbjct: 300 LPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAY 359

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
           + I  M V PDA +WG+LL  C+IH  V++ E   E + ELEPD+ G YV+L+N+YA+A 
Sbjct: 360 KLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAG 419

Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
           KW+ V +LR+ +  +GLKK+  CSWIE+  KV+ F++  +SHP ++ I + LKR    MK
Sbjct: 420 KWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMK 479

Query: 736 REGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHE 795
             GY P+      + ++ EK   +  HSE+LA+AFG+++  AG  + + KNLR+C DCH 
Sbjct: 480 EAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHV 539

Query: 796 MAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             KF+SK   REI +RD NR+HHFKDG CSC  FW
Sbjct: 540 AIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/334 (33%), Positives = 166/334 (49%), Gaps = 12/334 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + +AH LFD +S R++  WN MI GY  NG  E  + ++ +M + G   D  T   VL  
Sbjct: 52  LTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKA 111

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C+   A+  G+ +H   +++    ++     L+DMY+KCG ++ A +VF+K+ ER VV W
Sbjct: 112 CSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCW 171

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            SM+A Y++ G  D ++ L R M   G++P        + A A +GLL  GK++H Y   
Sbjct: 172 NSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWR 231

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           +  +S+  V  ALMDMYAK GS+  A S+F  +  K +VSWN MI           ALDL
Sbjct: 232 HGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDL 291

Query: 447 FVAMLQNFEPDGVTMACILPACASLAALERGR-EIHGYILRHGISADRNVANAIVDMYVK 505
           F  M     PD +T   +L AC+    L  G+      I    I         ++D+   
Sbjct: 292 FKEMKGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGH 351

Query: 506 CGVLVLARSLF-DMIPAKDLISWTIMIAGYGMHG 538
           CG L  A  L  +M    D   W  ++    +HG
Sbjct: 352 CGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHG 385



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 193/402 (48%), Gaps = 45/402 (11%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y S+LQ C   K++E GK++H+ IC+ GI  +  +L +KLV ++  C  L     +F++I
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNP-LLATKLVNLYCICNSLTNAHLLFDRI 62

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
               +F+WN+++  Y+  G ++ ++ L+ +M+  G+  D +TF  VLK  + +      K
Sbjct: 63  SKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGK 122

Query: 219 DAHK--------------------------------LFDELSDRDVVSWNCMISGYIANG 246
             HK                                +FD++ +RDVV WN M++ Y  NG
Sbjct: 123 KIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNG 182

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
             ++ L + + M   G      T V  ++  A+ G L  G+ +H ++ +  F        
Sbjct: 183 QPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKT 242

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L+DMY+K G ++ A  +FE + E+ VVSW +MI GYA  G  + A+ LF+ M +  + P
Sbjct: 243 ALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLP 301

Query: 367 DVYAITSILHACACDGLLEIGK-DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           D      +L AC+  GLL  GK      I + ++  ++     ++D+   CG + +A  +
Sbjct: 302 DHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKL 361

Query: 426 FNQMPVK-DIVSWNTMIGAL---------DLFVAMLQNFEPD 457
             +M V+ D   W  ++ +          +L +  L   EPD
Sbjct: 362 IMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPD 403



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 173/403 (42%), Gaps = 85/403 (21%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  I  +   G  E A+ + Y      +  D  T+  +L+ C+ L ++E+GKK+H  + 
Sbjct: 70  WNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVI 129

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            SG+   D  +G+ L+ M+  CG ++  R+VF+KID   V  WN ++  YS+ G   ESL
Sbjct: 130 RSGLE-SDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESL 188

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVG------------------------------- 212
            L + M   G+     TF   +   A  G                               
Sbjct: 189 ALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMY 248

Query: 213 -NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
             S  V  A  LF+ L ++ VVSWN MI+GY  +G A + L++FKEM       D  T V
Sbjct: 249 AKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVLP-DHITFV 307

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFS--KEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            VL+ C++ G L  G+ +H  ++ + F+    +     ++D+   CG L+ A ++  +M 
Sbjct: 308 GVLAACSHGGLLNEGK-MHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMR 366

Query: 330 -ERSVVSWTSMIAG----------------------------------YAREGVFDGAIR 354
            E     W +++                                    YA+ G +DG  R
Sbjct: 367 VEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVAR 426

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           L   M+ +G++  +        AC+    +E+G  VH ++ E+
Sbjct: 427 LRDLMMNKGLKKSI--------ACS---WIEVGNKVHAFLSED 458


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/762 (35%), Positives = 416/762 (54%), Gaps = 96/762 (12%)

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV------ 211
           I +   F WN L+ + + T N + +L  F +MQ+  + ++++TF  +LK  A +      
Sbjct: 13  ISHKDTFHWNSLIAK-NATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 212 --------------------------GNSRRVKDAHKLFDELSDR--DVVSWNCMISGYI 243
                                     G       A ++FDE+ +   DVVSW  +IS Y 
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 244 ANGVAEKGLEVFKEMLNL-GFN------VDLATMVTVLSGCA-NCGA--LMFGRAVHAFA 293
           +NG  ++    F  M  + G++      VD+ ++  ++S CA  CG+  L  G AVH   
Sbjct: 132 SNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLV 191

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE--KMGERSVVSWTSMIAGYAREGVFDG 351
           +K  F       N+++ MYS C D+ GA RVF    + +R VVSW S+I+G+   G  + 
Sbjct: 192 VKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAER 251

Query: 352 AIRLFRGMVREG---IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS-- 406
           A+R F  MV EG   +EP+   + ++L +CA  G +E    VH+YI      SSL V+  
Sbjct: 252 ALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSR--HSSLLVAKD 309

Query: 407 ----NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ 452
                AL+DM+A+CG++A A  +F+ +  K++V W+ MI           AL LF  ML 
Sbjct: 310 VVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLM 369

Query: 453 N-------FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
                    +P+ VT+  ++ AC+ L A      IH Y +  G+  D  +A+A++DM  K
Sbjct: 370 EGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAK 429

Query: 506 CGVLVLARSLFDMI--PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
           CG +   R +F  +    + ++SW+ MI   G+HG G  A+  F++MR  G EP+E+++I
Sbjct: 430 CGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYI 489

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           SVL ACSH+GLV++G   FN M  +  + P  +HYAC+VDLL R G+L EA+  I  MP+
Sbjct: 490 SVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPI 549

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
             D  +WGSLL  C +H   KL E V + +  L+ ++ G++VLLAN+Y +A +W++V ++
Sbjct: 550 KADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRM 609

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA----KKIESLLKRLRLEMKREGY 739
           R ++ R GL+K PG S+IEI  +V  F+A   SHP +    K+++ L +R+R   K   Y
Sbjct: 610 RVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAK---Y 666

Query: 740 FPKTRYALINADEMEKEVALCG-HSEKLAMAFGIL----------NLPAGQTIRVTKNLR 788
             +T   + + D +   +  C  HSE+LA+AFG++          +L     IR+TKNLR
Sbjct: 667 VTETGLNVEDGD-IAGLIXRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLR 725

Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           VC DCH   K +SK   RE+++RD++RFHHF+DG CSC  +W
Sbjct: 726 VCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 244/515 (47%), Gaps = 75/515 (14%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ ++L+ CA L+ L    +VH+ +   G+  D     + LV  +  CG      +VF++
Sbjct: 54  TFPALLKACAALRRLLPTLQVHAYLTRLGLAADR-FSAAALVDAYGKCGHAYYAAQVFDE 112

Query: 158 IDNGKVFI--WNLLMHEYSKTGNFKESLYLFKKMQ----------------SLGIAADSY 199
           +  G V +  W  L+  YS  G   E+   F +M+                SLG    + 
Sbjct: 113 MPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSAC 172

Query: 200 TFSCVLKCL----AV--------------VGNS--------RRVKDAHKLFD--ELSDRD 231
              C   CL    AV              +GNS        + V  A ++F+   +  RD
Sbjct: 173 AVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRD 232

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV---DLATMVTVLSGCANCGALMFGRA 288
           VVSWN +ISG+  NG AE+ L  F++M++ G +    +  T++ +L  CA  G +     
Sbjct: 233 VVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSW 292

Query: 289 VHAFALKA----CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           VH +          +K++     LLDM+++CG+L  A  +F+ +  ++VV W++MIAGY 
Sbjct: 293 VHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYE 352

Query: 345 REGVFDGAIRLFRGMVREG------IEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +    + A+RLFR M+ EG      ++P+   + S++ AC+  G       +H Y     
Sbjct: 353 QGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATG 412

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQM--PVKDIVSWNTMIG----------ALDL 446
           +     +++AL+DM AKCG +     VF++M    + +VSW++MIG          AL+L
Sbjct: 413 LDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALEL 472

Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYV 504
           F  M    +EP+ +T   +L AC+    +E+G+     + + +G+S        +VD+  
Sbjct: 473 FSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLG 532

Query: 505 KCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
           + G L  A ++   +P K DL  W  ++A   +HG
Sbjct: 533 RAGHLDEAHNVILNMPIKADLALWGSLLAACHLHG 567



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 148/335 (44%), Gaps = 66/335 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAM---EVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVH 119
           ++N+ I  F   G  E+A+   E + S   S ++    T  ++L+ CA+L  +E    VH
Sbjct: 235 SWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVH 294

Query: 120 SIICE---SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
             I     S +V  D V+ + L+ M   CG+L   R +F+ ++   V  W+ ++  Y + 
Sbjct: 295 EYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQG 354

Query: 177 GNFKESLYLFKKMQSLG------IAADSYTFSCVLKCLAVVGNSRRVKDAHK-------- 222
              +E+L LF++M   G      +  ++ T   V+   + +G SR     HK        
Sbjct: 355 SCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLD 414

Query: 223 ------------------------LFDEL--SDRDVVSWNCMISGYIANGVAEKGLEVFK 256
                                   +F E+  S R VVSW+ MI     +G  ++ LE+F 
Sbjct: 415 QDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFS 474

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS---KEISFNNT------ 307
           EM   G+  +  T ++VLS C++ G +  G        K+CF+   K+   + T      
Sbjct: 475 EMRTGGYEPNEITYISVLSACSHAGLVEQG--------KSCFNSMEKDYGMSPTGKHYAC 526

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIA 341
           L+D+  + G LD A  V   M  ++ ++ W S++A
Sbjct: 527 LVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLA 561


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/649 (38%), Positives = 361/649 (55%), Gaps = 46/649 (7%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A K+FDE+    V  WN MI GY     +E G+ ++K ML      D  T   +L G   
Sbjct: 88  ARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTK 147

Query: 280 CGALMFGRAVHAFALKACF-SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
             AL +G+ +   A+   F    +      + ++S CG ++ A ++F+      VV+W  
Sbjct: 148 DMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNV 207

Query: 339 MIAGYAREGVFDGAIRLFRGMVR--EGIEPDVYAITSILHACACDGLLEIGKDVHD-YIK 395
           +++GY R   ++ + RLF  M +  E + P+   +  +L AC+    L  GK +++ YIK
Sbjct: 208 VLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIK 267

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFN---------------------------- 427
           E  ++ +L + NAL+DM+A CG M  A  VF+                            
Sbjct: 268 EGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARK 327

Query: 428 ---QMPVKDIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAA 473
              QMP +D VSW  MI            L LF  M + N +PD  TM  IL ACA L A
Sbjct: 328 YFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGA 387

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           LE G     YI ++ I  D  + NA++DMY KCG +  A+ +F+ +  KD  +WT MI G
Sbjct: 388 LELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVG 447

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
              +G G +A+  F+ M +A + PDE+++I V+ AC+H GLV +G  FF+ M  +  I+P
Sbjct: 448 LANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKP 507

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            L HY CMVDLL R G+L EA   I  MPV P++ +WGSLL  CR+H  V+LAE  A  +
Sbjct: 508 NLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEI 567

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
            ELEP+N   YVLL N+YA  +KW+ +  +R+ +  RG+KK PGCS +E+ G V  FVAG
Sbjct: 568 LELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAG 627

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
             SHP +K+I + L+ ++ ++   GY P T    ++  E +KE AL  HSEKLA+A+ ++
Sbjct: 628 DKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALI 687

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
           +   G TIR+ KNLR+C DCH MA  +SK   RE+++RD  RFHHF+ G
Sbjct: 688 SSGKGVTIRIVKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHG 736



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 185/398 (46%), Gaps = 51/398 (12%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T   +L  C+ LK L  GK +++   + GIV  + +L + L+ MF +CG++   R V
Sbjct: 238 NSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGV 297

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+++    V  W  ++  ++                                      N+
Sbjct: 298 FDEMKTRDVISWTSIVTGFA--------------------------------------NT 319

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
            R+  A K FD++ +RD VSW  MI GY+     ++ L +F++M       D  TMV++L
Sbjct: 320 CRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSIL 379

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           + CA+ GAL  G     +  K     +    N L+DMY KCG+++ A ++F +M ++   
Sbjct: 380 TACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKF 439

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           +WT+MI G A  G  + A+ +F  M+   + PD      ++ AC   GL+  GK     +
Sbjct: 440 TWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNM 499

Query: 395 K-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA--------- 443
             ++ ++ +L     ++D+  + G + +A  V   MPVK + + W +++GA         
Sbjct: 500 AVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQL 559

Query: 444 LDLFVAMLQNFEPDGVTMACILPACASLAALERGREIH 481
            ++    +   EP+   +  +L  C   AA ++ + +H
Sbjct: 560 AEMAANEILELEPENGAVYVLL--CNIYAACKKWKNLH 595



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 175/368 (47%), Gaps = 50/368 (13%)

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           GD+  A +VF+++ + SV  W +MI GY+R    +  + L++ M+   I+PD +    +L
Sbjct: 83  GDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLL 142

Query: 376 HACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
                D  L+ GK + ++ +    + S+L+V    + +++ CG +  A  +F+     ++
Sbjct: 143 KGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEV 202

Query: 435 VSWNTMIGALD----------LFVAMLQNFE---PDGVTMACILPACASLAALERGREIH 481
           V+WN ++   +          LF+ M +  E   P+ VT+  +L AC+ L  L  G+ I+
Sbjct: 203 VTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIY 262

Query: 482 GYILRHGI-SADRNVANAIVDMYVKCGVL------------------------------- 509
              ++ GI   +  + NA++DM+  CG +                               
Sbjct: 263 NKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRI 322

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
            LAR  FD +P +D +SWT MI GY       + +  F DM+ + ++PDE + +S+L AC
Sbjct: 323 DLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTAC 382

Query: 570 SHSGLVDEG-WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           +H G ++ G W    + + +   +  + +   ++D+  + GN+ +A +    M    D  
Sbjct: 383 AHLGALELGEWAKTYIDKNKIKNDTFIGN--ALIDMYFKCGNVEKAKKIFNEMQ-KKDKF 439

Query: 629 IWGSLLCG 636
            W +++ G
Sbjct: 440 TWTAMIVG 447



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 13/194 (6%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVI 129
           + RF EV  L + M++       K D  T  SIL  CA L +LE G+   + I ++ I  
Sbjct: 350 MNRFKEVLTLFRDMQM----SNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIK- 404

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
           +D  +G+ L+ M+  CG++++ +++FN++     F W  ++   +  G+ +E+L +F  M
Sbjct: 405 NDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYM 464

Query: 190 QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSWNCMISGYIA 244
               +  D  T+  V+     VG    V      F  ++ +     ++  + CM+     
Sbjct: 465 LEASVTPDEITYIGVMCACTHVG---LVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGR 521

Query: 245 NGVAEKGLEVFKEM 258
            G  ++ LEV   M
Sbjct: 522 AGHLKEALEVIMNM 535


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/637 (37%), Positives = 344/637 (54%), Gaps = 85/637 (13%)

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG--ERSVVSW 336
           +C  L   RA+HA A  +  +++    ++LL  Y + G    A  +F+ M   +R+VV W
Sbjct: 29  SCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGW 88

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREG--------------------------------- 363
           ++++A +A  G  +GA RL   M R+G                                 
Sbjct: 89  SALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMH 148

Query: 364 ----IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
               + PD   ++  L A    GL+ +G+ +H Y  +   ++   V  AL+DMY KCG  
Sbjct: 149 GEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQA 208

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML------------------ 451
           A+   VF++    D+ S N +I           AL LF   +                  
Sbjct: 209 AEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACC 268

Query: 452 ------------------QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                             Q  EP+ VT+ C+LPA A++AAL  GR  H + LR G   D 
Sbjct: 269 VQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDV 328

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            V++A+VDMY KCG +  AR +FD + +++++SW  MI GY M+G   +A+  F+ M + 
Sbjct: 329 YVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKC 388

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
             +PD V+F  +L AC+ +GL +EG  +F  M  E  + P++EHYACMV LL R G L E
Sbjct: 389 KQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDE 448

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           AY  I  MP  PDA IWGSLL  CR+H  V LAE  AE +F LEP+N G YVLL+N+YA 
Sbjct: 449 AYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYAS 508

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
            + W+ V ++RE +   GLKK  GCSWIEIK KV++ +AG  SHP    I   + +L ++
Sbjct: 509 KKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQ 568

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           M++ G+ P T + L + +E EK+  L  HSEKLA+A G+++   G T+RV KNLR+CGDC
Sbjct: 569 MRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKNLRICGDC 628

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           HE  KF+S    REI +RD+NRFHHF  G+CSC  FW
Sbjct: 629 HEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 189/432 (43%), Gaps = 65/432 (15%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL 223
           F+ + L+H Y + G    +  LF  M           +S ++   A  G++   + A +L
Sbjct: 53  FVASSLLHAYLRLGTTGNARALFDGMPR--PQRTVVGWSALVAAHAARGDA---EGAWRL 107

Query: 224 FDELS-----DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT-VLSGC 277
            +E+      + +V++WN ++SG   +G A   +     M   G     AT V+  LS  
Sbjct: 108 LEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAV 167

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
            + G +  G+ +H +A+KA    +      L+DMY KCG     +RVF++     V S  
Sbjct: 168 GDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCN 227

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG--------------- 382
           ++IAG +R      A+RLF+  V  G+E +V + TSI+  C  +G               
Sbjct: 228 ALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQ 287

Query: 383 --------------------LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
                                L  G+  H +         +YVS+AL+DMYAKCG + DA
Sbjct: 288 GTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDA 347

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASL 471
             +F+ M  +++VSWN MIG          A+ +F +ML+   +PD VT  C+L AC   
Sbjct: 348 RIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQA 407

Query: 472 AALERGR----EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLIS 526
              E GR    E+H     +G+S        +V +  + G L  A  L   +P   D   
Sbjct: 408 GLTEEGRHYFKEMHN---EYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYI 464

Query: 527 WTIMIAGYGMHG 538
           W  ++    +HG
Sbjct: 465 WGSLLGSCRVHG 476



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 170/370 (45%), Gaps = 49/370 (13%)

Query: 82  AMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM 141
           A+  ++     + D       L    D+  +  G+++H    ++G   D  V+ + L+ M
Sbjct: 143 ALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVV-TALIDM 201

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           +  CG   E  RVF++  +  V   N L+   S+     E+L LFK+    G+       
Sbjct: 202 YGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGV------- 254

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                                      + +VVSW  +++  + NG   + +E F+EM   
Sbjct: 255 ---------------------------ELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQ 287

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G   +  T+  VL   AN  ALM GR+ H FAL+  F  ++  ++ L+DMY+KCG +  A
Sbjct: 288 GTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDA 347

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F+ M  R+VVSW +MI GYA  G    A+ +F  M++   +PD+   T +L AC   
Sbjct: 348 RIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQA 407

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA-------KCGSMADAESVFNQMPVK-D 433
           GL E G+    Y KE  M +   VS   M+ YA       + G + +A  + + MP + D
Sbjct: 408 GLTEEGR---HYFKE--MHNEYGVS-PRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPD 461

Query: 434 IVSWNTMIGA 443
              W +++G+
Sbjct: 462 AYIWGSLLGS 471



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 12/195 (6%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
            ++ ++ ++ T   +L   A++ +L  G+  H      G  + D  + S LV M+  CG 
Sbjct: 285 QAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGF-LHDVYVSSALVDMYAKCGR 343

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           +K+ R +F+ + +  V  WN ++  Y+  G    ++++F  M       D  TF+C+L  
Sbjct: 344 VKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAA 403

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLG 262
               G +   ++    F E+ +   VS     + CM++     G A K  E +  + ++ 
Sbjct: 404 CTQAGLT---EEGRHYFKEMHNEYGVSPRMEHYACMVTLL---GRAGKLDEAYDLISDMP 457

Query: 263 FNVDLATMVTVLSGC 277
           F  D     ++L  C
Sbjct: 458 FEPDAYIWGSLLGSC 472



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 6/163 (3%)

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
           +F PD   +     +C +L      R +H      G++ D  VA++++  Y++ G    A
Sbjct: 15  SFPPDPHLLPTAFKSCPTLPL---ARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNA 71

Query: 513 RSLFDMIP--AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ-AGIEPDEVSFISVLYAC 569
           R+LFD +P   + ++ W+ ++A +   G    A     +MR+  G+EP+ +++  ++   
Sbjct: 72  RALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGL 131

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           + SG   +       M  E  + P     +C +  +   G +S
Sbjct: 132 NRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVS 174


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/786 (32%), Positives = 417/786 (53%), Gaps = 45/786 (5%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           SE    +  T  S++  C  L++   G +V   + + G+  +  V  S L+ MF   G +
Sbjct: 124 SEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANS-LISMFGYFGSV 182

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           +E   VF+ +D      WN ++  Y + G  KESL  F  M  +    +S T S +L   
Sbjct: 183 EEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGC 242

Query: 209 AVVGNSR--------------------------------RVKDAHKLFDELSDRDVVSWN 236
             V N +                                R +DA  +F  + ++D++SWN
Sbjct: 243 GSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWN 302

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            M++ Y  +G     L++   M  +    +  T  + L+ C++      G+ +HA  +  
Sbjct: 303 SMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHV 362

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
              + +   N L+ +Y+K G +  A +VF+ M +R  V+W ++I G+A     D A++ F
Sbjct: 363 GLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAF 422

Query: 357 RGMVREGIEPDVYAITSILHAC-ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           + M  EG+  +   I+++L AC A + LLE G  +H +I     QS  YV N+L+ MYAK
Sbjct: 423 KLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAK 482

Query: 416 CGSMADAESVFNQMPVKD----------IVSWNTMIGALDLFVAMLQ-NFEPDGVTMACI 464
           CG +  + ++F+++  K+                M  AL   + M +     D  + +  
Sbjct: 483 CGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSEC 542

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           L A A LA LE G+++HG  ++ G  ++  VA+A +DMY KCG +     +      +  
Sbjct: 543 LAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSR 602

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           +SW I+ + +  HGF   A  TF++M   G++PD V+F+S+L ACSH G+V+EG  +++ 
Sbjct: 603 LSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDS 662

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVK 644
           M  E  I  K+ H  C++DLL R+G  +EA  FI+ MPV+P   +W SLL  C+ H  ++
Sbjct: 663 MIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLE 722

Query: 645 LAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIK 704
           L  K  E++ +L+P +   YVL +N+ A   KWE+V+K+R ++    +KK P CSW+++K
Sbjct: 723 LGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLK 782

Query: 705 GKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSE 764
            K+++F  G  SHP A +I + L+ L+  +K  GY P   YAL + DE +KE  L  HSE
Sbjct: 783 NKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSE 842

Query: 765 KLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRC 824
           +LA+A+G+++ P G T+++ KNLRVCGDCH + KF S    R+IVLRD  RFH F  G+C
Sbjct: 843 RLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQC 902

Query: 825 SCRGFW 830
           SC  +W
Sbjct: 903 SCTDYW 908



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 212/444 (47%), Gaps = 19/444 (4%)

Query: 142 FVTCGDLKEGRRVFNKIDN-----GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA 196
           FV  G  +E  R FN++ +       + + +L+           E + +   +  +G+ +
Sbjct: 4   FVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLS 63

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
           D +  + ++    + GN     DA K+F E+  ++VVSW  ++  Y+  G     + +++
Sbjct: 64  DVFVGTSLVH---LYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
            M + G + +  TM +V+S C +    + G  V    +K      +S  N+L+ M+   G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
            ++ A  VF  M E   +SW SMIA Y R G+   ++R F  M R   E +   ++++L 
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA 240

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
            C     L+ G+ +H  + +    S++  SN L+ MY+  G   DAE VF  M  KD++S
Sbjct: 241 GCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMIS 300

Query: 437 WNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYIL 485
           WN+M+           AL L   M       + VT    L AC+       G+ +H  ++
Sbjct: 301 WNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVI 360

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
             G+  +  V NA+V +Y K G+++ A+ +F  +P +D ++W  +I G+       +A+ 
Sbjct: 361 HVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALK 420

Query: 546 TFNDMRQAGIEPDEVSFISVLYAC 569
            F  MR+ G+  + ++  +VL AC
Sbjct: 421 AFKLMREEGVPINYITISNVLGAC 444



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 197/410 (48%), Gaps = 14/410 (3%)

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF-GRAVHAFALKAC 297
           +SG++  G   + +  F EM + G       + ++++ C     ++  G  VH F +K  
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
              ++    +L+ +Y   G    A++VF++M  ++VVSWT+++  Y   G     + ++R
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M  EG+  +   ++S++  C       +G  V  ++ +  +++++ V+N+L+ M+   G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180

Query: 418 SMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQ-NFEPDGVTMACILP 466
           S+ +A  VF+ M   D +SWN+MI A          L  F  M + + E +  T++ +L 
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA 240

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
            C S+  L+ GR IH  +L+ G +++   +N ++ MY   G    A  +F  +  KD+IS
Sbjct: 241 GCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMIS 300

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           W  M+A Y   G   DA+     M       + V+F S L ACS      EG +  + + 
Sbjct: 301 WNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEG-KILHALV 359

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
               +   +     +V L +++G + EA +  + MP   D   W +L+ G
Sbjct: 360 IHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWNALIGG 408



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 174/424 (41%), Gaps = 77/424 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLC-ADLKSLEDGKKVHSI 121
            +NA IG   +    ++A++   L   E   I+  T  ++L  C A    LE G  +H+ 
Sbjct: 401 TWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAF 460

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I  +G   D+ V  S L+ M+  CGDL     +F+++ +     WN +M   +  G+ +E
Sbjct: 461 IILTGFQSDEYVQNS-LITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEE 519

Query: 182 SLYLFKKMQSLGIAADSYTFS-CV--------------LKCLAV---------------- 210
           +L    +M+  G+  D ++FS C+              L  LAV                
Sbjct: 520 ALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMD 579

Query: 211 -VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
             G    + D  ++     +R  +SWN + S +  +G  EK  E F EM+NLG   D  T
Sbjct: 580 MYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVT 639

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V++LS C++ G +  G               +++ ++++  +     +   + + + +G
Sbjct: 640 FVSLLSACSHGGMVEEG---------------LAYYDSMIKEFGIPAKIGHCVCIIDLLG 684

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-K 388
                          R G F  A    + M    + P  +   S+L AC   G LE+G K
Sbjct: 685 ---------------RSGRFAEAETFIKEM---PVSPTDHVWRSLLAACKTHGNLELGRK 726

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VSWNTMIGA 443
            V + +K +    S YV  +  ++ A  G   D E +  QM +  I      SW  +   
Sbjct: 727 AVENLLKLDPSDDSAYVLYS--NICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNK 784

Query: 444 LDLF 447
           L LF
Sbjct: 785 LSLF 788


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/568 (38%), Positives = 338/568 (59%), Gaps = 12/568 (2%)

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           ++ C    AL  GR VHA  +KA +   +     L+ +Y +CG LD A  V + M ER+V
Sbjct: 48  ITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNV 107

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSWT+MI+GY++ G    A+ LF  M+R G + + + + ++L +C     ++  + VH  
Sbjct: 108 VSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSL 167

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           + + + +S ++V ++L+DMY K G++ +A  VF+ +P +D VS   +I           A
Sbjct: 168 VVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEA 227

Query: 444 LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           LDLF  +  +  + + VT   +L + + LA+L  G+++HG ILR  +     + N+++DM
Sbjct: 228 LDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDM 287

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG L+ +R +FD +P +  ISW  M+ GYG HG G + +  F  M +  ++PD V+ 
Sbjct: 288 YSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTL 346

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           ++VL  CSH GLVDEG   F+++  E N    + HY C++DLL R+G L +A   IE MP
Sbjct: 347 LAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMP 406

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
             P   IWGSLL  CR+H  V + E VA+ + ++EP N G YV+L+N+YA A  W++V +
Sbjct: 407 FEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFR 466

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R+ +    + K P  SWI +   ++ F +    HP  K I + +K + +++K  G+ P 
Sbjct: 467 VRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPD 526

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
               L + D+ +KE  L GHSEKLA+ FG++N P G TI+V KNLR+C DCH  AKF+SK
Sbjct: 527 LSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSK 586

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REI LRD NRFH  KDG C+C  +W
Sbjct: 587 VYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 192/379 (50%), Gaps = 36/379 (9%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y + +  C + ++L +G++VH+ + ++        L ++L+ ++V CG L + R V + +
Sbjct: 44  YDAAITACVERQALGEGRQVHAHMVKARYR-PPVYLATRLIILYVRCGALDDARNVLDGM 102

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------------- 205
               V  W  ++  YS++G   E+L LF +M   G  A+ +T + VL             
Sbjct: 103 PERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVE 162

Query: 206 -------------------KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                                L + G S  +++A K+FD L +RD VS   +ISGY   G
Sbjct: 163 QVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLG 222

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           + ++ L++F+++ + G   +  T  T+L+  +   +L +G+ VH   L+      I   N
Sbjct: 223 LDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQN 282

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           +L+DMYSKCG L  + RVF+ M +RS +SW +M+ GY R G+    ++LFR M  E ++P
Sbjct: 283 SLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKP 341

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           D   + ++L  C+  GL++ G D+ D I KE +    +     ++D+  + G +  A  +
Sbjct: 342 DSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDL 401

Query: 426 FNQMPVKDIVS-WNTMIGA 443
              MP +   + W +++GA
Sbjct: 402 IEHMPFEPTPAIWGSLLGA 420



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 169/316 (53%), Gaps = 13/316 (4%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + DA  + D + +R+VVSW  MISGY  +G   + LE+F  ML  G   +  T+ TVL+ 
Sbjct: 92  LDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTS 151

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C    ++     VH+  +K  F   +   ++LLDMY K G++  A +VF+ + ER  VS 
Sbjct: 152 CPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSC 211

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T++I+GYA+ G+ D A+ LFR +   G++ +    T++L + +    L  GK VH  I  
Sbjct: 212 TAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILR 271

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDL 446
            ++   + + N+L+DMY+KCG +  +  VF+ MP +  +SWN M+            + L
Sbjct: 272 KELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQL 331

Query: 447 FVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN--AIVDMYV 504
           F  M +  +PD VT+  +L  C+    ++ G +I   I++   +A  ++ +   ++D+  
Sbjct: 332 FRTMTEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQ-NAVIHIGHYGCVIDLLG 390

Query: 505 KCGVLVLARSLFDMIP 520
           + G L  A  L + +P
Sbjct: 391 RSGQLQKALDLIEHMP 406



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVH 119
           T +  A I  + ++G  ++A+++   LYSS   + +  T+ ++L   + L SL  GK+VH
Sbjct: 208 TVSCTAIISGYAQLGLDDEALDLFRQLYSS-GMQCNYVTFTTLLTSLSGLASLNYGKQVH 266

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
            +I    +     VL + L+ M+  CG L   RRVF+ +       WN ++  Y + G  
Sbjct: 267 GLILRKELPFFI-VLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIG 325

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD-----VVS 234
           +E + LF+ M    +  DS T   VL   +  G    V +   +FD +         +  
Sbjct: 326 QEVVQLFRTMTE-EVKPDSVTLLAVLSGCSHGG---LVDEGLDIFDLIVKEQNAVIHIGH 381

Query: 235 WNCMISGYIANGVAEKGLEVFKEM 258
           + C+I     +G  +K L++ + M
Sbjct: 382 YGCVIDLLGRSGQLQKALDLIEHM 405


>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/599 (39%), Positives = 351/599 (58%), Gaps = 17/599 (2%)

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G     L VF+  L      D  T    LS CA  G L  G +V   A  A +  ++  
Sbjct: 87  RGSPASALRVFRA-LPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFV 145

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            ++LL +Y++ G +  A++VF++M  R  V+W++M+AG+   G    AI+++R M  +G+
Sbjct: 146 CSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGV 205

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           + D   +  ++ AC     + +G  VH ++  + M+  +  + +L+DMYAK G +  A  
Sbjct: 206 KGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACR 265

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAA 473
           VF  M  ++ VSW+ MI           AL LF  M     +PD   +   L AC+++  
Sbjct: 266 VFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGF 325

Query: 474 LERGREIHGYILRHGISADRN--VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           L+ GR +HG+I+R     D N  +  A +DMY KCG L  A+ LF+MI  +DLI W  MI
Sbjct: 326 LKLGRSVHGFIVRR---FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMI 382

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           A  G HG G DA+  F +M + G+ PD  +F S+L A SHSGLV+EG  +F  M     I
Sbjct: 383 ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKI 442

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P  +HY C+VDLL+R+G + EA   +  M   P   IW +LL GC  + +++L E +A+
Sbjct: 443 TPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIAD 502

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
           ++ EL+PD+ G   L++N+YA  +KW++V+++R+ +   G KK PGCS IEI+G  + F+
Sbjct: 503 NILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFL 562

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFG 771
               SHP  ++I S + +L LEM++ GY P+T +   + +E  KE  L  HSEKLA+AFG
Sbjct: 563 MEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFG 622

Query: 772 ILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +LN   G  + + KNLRVCGDCH+  K++SK A REIV+RD+ RFHHFKDG CSCR +W
Sbjct: 623 LLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 172/387 (44%), Gaps = 42/387 (10%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           ++ D+ T+   L  CA L  L  G+ V     ++G   DD  + S L+ ++   G + + 
Sbjct: 104 ARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYK-DDVFVCSSLLHLYARWGAMGDA 162

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
            +VF+++       W+ ++  +   G   +++ ++++M+  G+  D      V++     
Sbjct: 163 VKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAA 222

Query: 212 GNSRRVKDAH--------------------------------KLFDELSDRDVVSWNCMI 239
            N R     H                                ++F  +  R+ VSW+ MI
Sbjct: 223 RNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMI 282

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           SG+  NG +++ L +F+ M   G   D   +V+ L  C+N G L  GR+VH F ++  F 
Sbjct: 283 SGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FD 341

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
                    +DMYSKCG L  A  +F  + +R ++ W +MIA     G    A+ LF+ M
Sbjct: 342 FNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEM 401

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKD----VHDYIKENDMQSSLYVSNALMDMYAK 415
              G+ PD     S+L A +  GL+E GK     + ++ K    +   YV   L+D+ A+
Sbjct: 402 NETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKH-YV--CLVDLLAR 458

Query: 416 CGSMADAESVFNQMPVKDIVS-WNTMI 441
            G + +A  +   M  +  V+ W  ++
Sbjct: 459 SGLVEEASDLLTSMKAEPTVAIWVALL 485



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 127/287 (44%), Gaps = 42/287 (14%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D      ++Q C   +++  G  VH  +   G+ +D  V  + LV M+   G L    
Sbjct: 206 KGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMD-VVTATSLVDMYAKNGLLDVAC 264

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS-------------- 198
           RVF  + +     W+ ++  +++ G   E+L LF+ MQ+ GI  DS              
Sbjct: 265 RVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIG 324

Query: 199 ---------------YTFSCVLKCLAVVGNSR--RVKDAHKLFDELSDRDVVSWNCMISG 241
                          + F+C+L   A+   S+   +  A  LF+ +SDRD++ WN MI+ 
Sbjct: 325 FLKLGRSVHGFIVRRFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIAC 384

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL-----SGCANCGALMFGRAVHAFALKA 296
             A+G  +  L +F+EM   G   D AT  ++L     SG    G L FG  V+ F +  
Sbjct: 385 CGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITP 444

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAG 342
                +     L+D+ ++ G ++ A  +   M  E +V  W ++++G
Sbjct: 445 AEKHYV----CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSG 487



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 111/233 (47%), Gaps = 17/233 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           +++A I  F + G  ++A+ +  + + S I  D+    S L  C+++  L+ G+ VH  I
Sbjct: 277 SWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFI 336

Query: 123 CESGIVID-DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
                  D + +LG+  + M+  CG L   + +FN I +  + +WN ++      G  ++
Sbjct: 337 VRR---FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQD 393

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WN 236
           +L LF++M   G+  D  TF+ +L  L+   +S  V++    F  + +   ++     + 
Sbjct: 394 ALTLFQEMNETGMRPDHATFASLLSALS---HSGLVEEGKLWFGCMVNHFKITPAEKHYV 450

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           C++     +G+ E+  ++   M        +A  V +LSGC N   L  G ++
Sbjct: 451 CLVDLLARSGLVEEASDLLTSM---KAEPTVAIWVALLSGCLNNKKLELGESI 500


>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/599 (39%), Positives = 351/599 (58%), Gaps = 17/599 (2%)

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G     L VF+  L      D  T    LS CA  G L  G +V   A  A +  ++  
Sbjct: 87  RGSPASALRVFRA-LPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFV 145

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            ++LL +Y++ G +  A++VF +M  R  V+W++M+AG+   G    AI+++R M  +G+
Sbjct: 146 CSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGV 205

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           + D   +  ++ AC     + +G  VH ++  + M+  +  + +L+DMYAK G +  A  
Sbjct: 206 KGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACR 265

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAA 473
           VF  M  ++ VSW+ MI           AL LF  M     +PD   +   L AC+++  
Sbjct: 266 VFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGF 325

Query: 474 LERGREIHGYILRHGISADRN--VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           L+ GR +HG+I+R     D N  +  A +DMY KCG L  A+ LF+MI  +DLI W  MI
Sbjct: 326 LKLGRSVHGFIVRR---FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMI 382

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           A  G HG G DA+  F +M + G+ PD  +F S+L A SHSGLV+EG  +F  M     I
Sbjct: 383 ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKI 442

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P  +HY C+VDLL+R+G + EA   +  M   P   IW +LL GC  + +++L E +A+
Sbjct: 443 TPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIAD 502

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
           ++ EL+PD+ G   L++N+YA  +KW++V+++R+ +   G KK PGCS IEI+G  ++FV
Sbjct: 503 NILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFV 562

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFG 771
               SHP  ++I S + +L LEM++ GY P+T +   + +E  KE  L  HSE+LA+AFG
Sbjct: 563 MEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFG 622

Query: 772 ILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +LN   G  + + KNLRVCGDCH+  K++SK A REIV+RD+ RFHHFKDG CSCR +W
Sbjct: 623 LLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 194/381 (50%), Gaps = 17/381 (4%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
           + L +   ++ G+ +    +  +    G   D +  S +L   A  G    + DA K+F 
Sbjct: 111 FTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGA---MGDAVKVFV 167

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            +  RD V+W+ M++G+++ G     +++++ M   G   D   M+ V+  C     +  
Sbjct: 168 RMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRM 227

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G +VH   L+     ++    +L+DMY+K G LD A RVF  M  R+ VSW++MI+G+A+
Sbjct: 228 GASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQ 287

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G  D A+RLFR M   GI+PD  A+ S L AC+  G L++G+ VH +I       +  +
Sbjct: 288 NGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCIL 346

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-F 454
             A +DMY+KCGS+A A+ +FN +  +D++ WN MI           AL LF  M +   
Sbjct: 347 GTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGM 406

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIVDMYVKCGVLVLAR 513
            PD  T A +L A +    +E G+   G ++ H  I+        +VD+  + G++  A 
Sbjct: 407 RPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEAS 466

Query: 514 SLFDMIPAKDLIS-WTIMIAG 533
            L   + A+  ++ W  +++G
Sbjct: 467 DLLTSMKAEPTVAIWVALLSG 487



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 190/436 (43%), Gaps = 52/436 (11%)

Query: 77  GNLEKAMEVLYS-SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLG 135
           G+   A+ V  +    ++ D+ T+   L  CA L  L  G+ V     ++G   DD  + 
Sbjct: 88  GSPASALRVFRALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYK-DDVFVC 146

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           S L+ ++   G + +  +VF ++       W+ ++  +   G   +++ ++++M+  G+ 
Sbjct: 147 SSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVK 206

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAH--------------------------------KL 223
            D      V++      N R     H                                ++
Sbjct: 207 GDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRV 266

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           F  +  R+ VSW+ MISG+  NG +++ L +F+ M   G   D   +V+ L  C+N G L
Sbjct: 267 FGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFL 326

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             GR+VH F ++  F          +DMYSKCG L  A  +F  + +R ++ W +MIA  
Sbjct: 327 KLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACC 385

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK----DVHDYIKENDM 399
              G    A+ LF+ M   G+ PD     S+L A +  GL+E GK     + ++ K    
Sbjct: 386 GAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPA 445

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA------LDLFVAMLQ 452
           +   YV   L+D+ A+ G + +A  +   M  +  V+ W  ++        L+L  ++  
Sbjct: 446 EKH-YV--CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIAD 502

Query: 453 N---FEPDGVTMACIL 465
           N    +PD V +  ++
Sbjct: 503 NILELQPDDVGVLALV 518



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 111/233 (47%), Gaps = 17/233 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           +++A I  F + G  ++A+ +  + + S I  D+    S L  C+++  L+ G+ VH  I
Sbjct: 277 SWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFI 336

Query: 123 CESGIVID-DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
                  D + +LG+  + M+  CG L   + +FN I +  + +WN ++      G  ++
Sbjct: 337 VRR---FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQD 393

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WN 236
           +L LF++M   G+  D  TF+ +L  L+   +S  V++    F  + +   ++     + 
Sbjct: 394 ALTLFQEMNETGMRPDHATFASLLSALS---HSGLVEEGKLWFGRMVNHFKITPAEKHYV 450

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           C++     +G+ E+  ++   M        +A  V +LSGC N   L  G ++
Sbjct: 451 CLVDLLARSGLVEEASDLLTSM---KAEPTVAIWVALLSGCLNNKKLELGESI 500


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/563 (41%), Positives = 340/563 (60%), Gaps = 19/563 (3%)

Query: 286 GRAVHAFALKACFSKEISFN-NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           GR +H  A+++       F+ + LL MY+ C     A + F+++   + V  T+M +GY 
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG--KDVHDYIKENDMQSS 402
           R  +   ++ LFR ++  G    V    +++   A   + + G    +H  + +  +   
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227

Query: 403 LYVSNALMDMYAKCG--SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM 450
             V N ++D YAK G   +  A  VF+ M  KD+VSWN+MI           AL L+  M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYRKM 286

Query: 451 LQ---NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
           L    + + + VT++ IL ACA    ++ G+ IH  ++R G+  +  V  ++VDMY KCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            + +AR  F  I  K+++SW+ MI GYGMHG G +A+  FN+M ++G  P+ ++FISVL 
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLA 406

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSH+GL+D+G  ++N M+    IEP +EHY CMVDLL R G L EAY  I+ M V PDA
Sbjct: 407 ACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 466

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            IWG+LL  CRIH  V+LAE  A+ +FEL+  N GYYVLL+N+YAEA  W++V+++R  +
Sbjct: 467 AIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLV 526

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
             RG++K PG S +E+KG+ ++F  G  SHP  K+I S L +L  +M+  GY P T   L
Sbjct: 527 KTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVL 586

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
            + DE EK  AL  HSEKLA+AF ++N   G  I V KNLRVC DCH   K ++K A+RE
Sbjct: 587 HDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQRE 646

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           I++RD  RFHHFKDG CSC  +W
Sbjct: 647 IIVRDLQRFHHFKDGSCSCGDYW 669



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 182/361 (50%), Gaps = 23/361 (6%)

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
           +D ++ S +L    +  +  R  DA K FDE+   + V    M SGY+ N +    L +F
Sbjct: 123 SDPFSASALLH---MYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALF 179

Query: 256 KEMLNLG--FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           ++++  G    VD A  +   S  A         ++HA  +K     +    NT+LD Y+
Sbjct: 180 RKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYA 239

Query: 314 KCG--DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM--VREGIEPDVY 369
           K G  DL  A +VF+ M E+ VVSW SMIA YA+ G+   A+ L+R M  V   I+ +  
Sbjct: 240 KGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAV 298

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            +++IL ACA  G ++ GK +H+ +    ++ ++YV  +++DMY+KCG +  A   F ++
Sbjct: 299 TLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKI 358

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGR 478
             K+I+SW+ MI           ALD+F  M ++ + P+ +T   +L AC+    L++GR
Sbjct: 359 KEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGR 418

Query: 479 EIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGM 536
             +  +  R GI         +VD+  + G L  A  L   +  K D   W  +++   +
Sbjct: 419 YWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRI 478

Query: 537 H 537
           H
Sbjct: 479 H 479



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 41/249 (16%)

Query: 118 VHSIICESGIVIDDGVLGSKLVFMFVTCG--DLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           +H+++ ++G+  D GV+ + ++  +   G  DL   R+VF+ ++   V  WN ++  Y++
Sbjct: 215 LHALVVKTGLDGDAGVVNT-MLDAYAKGGRRDLGAARKVFDTMEK-DVVSWNSMIALYAQ 272

Query: 176 TGNFKESLYLFKKMQSLG--IAADSYTFSCVL------------KCL------------A 209
            G   ++L L++KM ++   I  ++ T S +L            KC+             
Sbjct: 273 NGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENV 332

Query: 210 VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
            VG S         RV+ A K F ++ +++++SW+ MI+GY  +G  ++ L++F EM   
Sbjct: 333 YVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRS 392

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE--ISFNNTLLDMYSKCGDLD 319
           G N +  T ++VL+ C++ G L  GR  +  A+K  F  E  +     ++D+  + G LD
Sbjct: 393 GQNPNYITFISVLAACSHAGLLDKGRYWYN-AMKKRFGIEPGVEHYGCMVDLLGRAGCLD 451

Query: 320 GAIRVFEKM 328
            A  + ++M
Sbjct: 452 EAYGLIKEM 460



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 16/222 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++N+ I  + + G    A+    ++L  S   K +  T  +IL  CA   +++ GK +H+
Sbjct: 262 SWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHN 321

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            +   G+  ++  +G+ +V M+  CG ++  R+ F KI    +  W+ ++  Y   G+ +
Sbjct: 322 QVVRMGLE-ENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQ 380

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSW 235
           E+L +F +M   G   +  TF   +  LA   ++  +      ++ +  R      V  +
Sbjct: 381 EALDIFNEMCRSGQNPNYITF---ISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHY 437

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
            CM+      G  ++   + KEM       D A    +LS C
Sbjct: 438 GCMVDLLGRAGCLDEAYGLIKEM---KVKPDAAIWGALLSAC 476


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/568 (39%), Positives = 340/568 (59%), Gaps = 12/568 (2%)

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           ++ C    AL  GR VHA  + A +   +     L+ MY +CG LD A  V ++M ERSV
Sbjct: 49  ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSV 108

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSWT+MI+GY++      A+ LF  M+R G  P+ Y + ++L +C+    +  GK VH  
Sbjct: 109 VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 168

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           + + + +S ++V ++L+DMYAK  ++ +A  VF+ +P +D+VS   +I           A
Sbjct: 169 LVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEA 228

Query: 444 LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           LDLF  +  +  + + VT   ++ A + LA+L+ G+++H  ILR  +     + N+++DM
Sbjct: 229 LDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDM 288

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG L+ +R +FD +  + ++SW  M+ GYG HG G + I+ F D+ +  ++PD V+ 
Sbjct: 289 YSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTL 347

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           ++VL  CSH GLVDEG   F+ +  E +      HY C++DLL R+G L +A   IE MP
Sbjct: 348 LAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMP 407

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
                +IWGSLL  CR+H  V + E VA+ + E+EP+N G YV+L+N+YA A  W++V K
Sbjct: 408 FESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFK 467

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R+ +  + + K PG SWI +   ++ F +    HP  K I + +K + +++K  G+ P 
Sbjct: 468 VRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPD 527

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
               L + D+ +KE  L GHSEKLA+ FG++N P G TIRV KNLR+C DCH  AKF+SK
Sbjct: 528 LSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSK 587

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REI LRD NRFH    G C+C  +W
Sbjct: 588 VYEREISLRDKNRFHLLTHGNCTCGDYW 615



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 197/381 (51%), Gaps = 40/381 (10%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y + +  C + ++L +G++VH+ +  +        LG++LV M+V CG L + R V +++
Sbjct: 45  YEAAITACIERRALWEGRQVHARMI-TARYRPAVFLGTRLVTMYVRCGALDDARNVLDRM 103

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----------- 207
               V  W  ++  YS+T    E+L LF KM   G   + YT + VL             
Sbjct: 104 PERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGK 163

Query: 208 ---------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                                L +   S  +++A ++FD L +RDVVS   +ISGY   G
Sbjct: 164 QVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKG 223

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           + E+ L++F+++ + G   +  T  T+++  +   +L +G+ VHA  L+      ++  N
Sbjct: 224 LDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN 283

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           +L+DMYSKCG L  + RVF+ M ERSVVSW +M+ GY R G+    I LF+ + +E ++P
Sbjct: 284 SLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKP 342

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS---NALMDMYAKCGSMADAE 423
           D   + ++L  C+  GL++ G D+ D + +   QS+L  +     ++D+  + G +  A 
Sbjct: 343 DSVTLLAVLSGCSHGGLVDEGLDIFDTVVKE--QSALLHTGHYGCIIDLLGRSGRLEKAL 400

Query: 424 SVFNQMPVKDIVS-WNTMIGA 443
           ++   MP +   S W +++GA
Sbjct: 401 NLIENMPFESTPSIWGSLLGA 421



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 181/335 (54%), Gaps = 14/335 (4%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + DA  + D + +R VVSW  MISGY       + L++F +ML  G   +  T+ TVL+ 
Sbjct: 93  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 152

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C+   ++  G+ VH+  +K  F   +   ++LLDMY+K  ++  A RVF+ + ER VVS 
Sbjct: 153 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 212

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T++I+GYA++G+ + A+ LFR +  EG++ +    T+++ A +    L+ GK VH  I  
Sbjct: 213 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 272

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDL 446
            ++   + + N+L+DMY+KCG +  +  VF+ M  + +VSWN M+            + L
Sbjct: 273 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISL 332

Query: 447 FVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN--AIVDMYV 504
           F  + +  +PD VT+  +L  C+    ++ G +I   +++   SA  +  +   I+D+  
Sbjct: 333 FKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQ-SALLHTGHYGCIIDLLG 391

Query: 505 KCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
           + G L  A +L + +P +   S W  ++    +H 
Sbjct: 392 RSGRLEKALNLIENMPFESTPSIWGSLLGACRVHA 426



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 165/331 (49%), Gaps = 18/331 (5%)

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           +  R ++   +   G A +  F   +R   GM   G     +   + + AC     L  G
Sbjct: 2   LAARGLLRPEAAARGLALQRCFVAPLRAASGMALPGASARFHEYEAAITACIERRALWEG 61

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
           + VH  +     + ++++   L+ MY +CG++ DA +V ++MP + +VSW TMI      
Sbjct: 62  RQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQT 121

Query: 443 -----ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                ALDLF+ ML+    P+  T+A +L +C+   ++ +G+++H  +++    +   V 
Sbjct: 122 ERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVG 181

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           ++++DMY K   +  AR +FD +P +D++S T +I+GY   G   +A+  F  +   G++
Sbjct: 182 SSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQ 241

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNM-MRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
            + V+F +++ A S    +D G +   + +R E      L++   ++D+ S+ G L  + 
Sbjct: 242 CNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN--SLIDMYSKCGKLLYSR 299

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIH---HEV 643
           R  + M +      W ++L G   H   HEV
Sbjct: 300 RVFDNM-LERSVVSWNAMLMGYGRHGLGHEV 329



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 130/279 (46%), Gaps = 36/279 (12%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  ++L  C+  +S+  GK+VHS++ ++        +GS L+ M+    +++E RRVF+ 
Sbjct: 145 TLATVLTSCSGPQSIYQGKQVHSLLVKTNFE-SHMFVGSSLLDMYAKSENIQEARRVFDT 203

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +    V     ++  Y++ G  +E+L LF+++ S G+  +  TF+ ++  L+ + +    
Sbjct: 204 LPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYG 263

Query: 218 KDAHKL--------------------------------FDELSDRDVVSWNCMISGYIAN 245
           K  H L                                FD + +R VVSWN M+ GY  +
Sbjct: 264 KQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRH 323

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS-KEISF 304
           G+  + + +FK+ L+     D  T++ VLSGC++ G +  G  +    +K   +      
Sbjct: 324 GLGHEVISLFKD-LHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGH 382

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAG 342
              ++D+  + G L+ A+ + E M   S  S W S++  
Sbjct: 383 YGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGA 421



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 18/276 (6%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
            A I  + + G  E+A+++     SE  + +  T+ +++   + L SL+ GK+VH++I  
Sbjct: 213 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 272

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
             +      L + L+ M+  CG L   RRVF+ +    V  WN ++  Y + G   E + 
Sbjct: 273 KELPFFVA-LQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVIS 331

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVV-----SWNCMI 239
           LFK +    +  DS T   VL   +  G    V +   +FD +            + C+I
Sbjct: 332 LFKDLHK-EVKPDSVTLLAVLSGCSHGG---LVDEGLDIFDTVVKEQSALLHTGHYGCII 387

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
                +G  EK L + +   N+ F    +   ++L  C     +  G  V    L+    
Sbjct: 388 DLLGRSGRLEKALNLIE---NMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLE--ME 442

Query: 300 KEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSVV 334
            E + N  +L ++Y+  G      +V + M E++V 
Sbjct: 443 PENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVT 478


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/690 (34%), Positives = 388/690 (56%), Gaps = 44/690 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D+ T+  +++ CA L ++  G+ VH      G+   D  +GS L+ M+   G L + R+V
Sbjct: 145 DSHTFPYVVKSCAALGAIALGRLVHRTARTLGL-DGDMFVGSALIKMYANGGLLWDARQV 203

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV---- 210
           F+ +      +WN++M  Y K G+   ++ LF  M++ G   +  T +C L   A     
Sbjct: 204 FDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDL 263

Query: 211 --------------------VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGY 242
                               V N+        + + D  KLF  +   D+V+WN MISG 
Sbjct: 264 FFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGC 323

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           + NG  ++ L +F +M   G   D  T+V++L    +      G+ +H + ++ C   ++
Sbjct: 324 VQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDV 383

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              + L+D+Y KC  +  A  V++      VV  ++MI+GY   G+   A+++FR ++ +
Sbjct: 384 FLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQ 443

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           GI P+  AI S+L ACA    +++G+++H Y  +N  +   YV +ALMDMYAKCG +  +
Sbjct: 444 GIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLS 503

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
             +F+++  KD V+WN+MI           AL+LF  M ++  +   VT++ +L ACASL
Sbjct: 504 HYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASL 563

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            A+  G+EIHG +++  I AD    +A++DMY KCG L  A  +F+ +P K+ +SW  +I
Sbjct: 564 PAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSII 623

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           A YG +G   ++++    M++ G + D V+F++++ AC+H+G V EG R F  M  E  I
Sbjct: 624 ASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQI 683

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P++EH+ACMVDL SR G L +A   I  MP  PDA IWG+LL  CR+H  V+LAE  ++
Sbjct: 684 APRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQ 743

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            +F+L+P N+GYYVL++N+ A A +W+ V K+R  +    ++K PG SW+++    ++FV
Sbjct: 744 ELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFV 803

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           A   SHP ++ I   LK + LE++ EGY P
Sbjct: 804 AADKSHPDSEDIYMSLKSILLELREEGYIP 833



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 182/634 (28%), Positives = 307/634 (48%), Gaps = 52/634 (8%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           ++L+ C     L  G +VH     +G+   D  L ++LV M+V     ++   VF+ +  
Sbjct: 44  AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103

Query: 161 GK---VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA--ADSYTFSCVLKCLAVVG--- 212
           G       WN L+   +  G+++ +L  + KM +   A   DS+TF  V+K  A +G   
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163

Query: 213 -----------------------------NSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                        N   + DA ++FD +++RD V WN M+ GY+
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
             G     +E+F +M   G   + AT+   LS  A    L FG  +H  A+K     E++
Sbjct: 224 KAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVA 283

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             NTL+ MY+KC  LD   ++F  M    +V+W  MI+G  + G  D A+ LF  M + G
Sbjct: 284 VANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSG 343

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           I PD   + S+L A         GK++H YI  N +   +++ +AL+D+Y KC ++  A+
Sbjct: 344 IRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQ 403

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLA 472
           SV++     D+V  +TMI           A+ +F  +L Q   P+ V +A +LPACAS+A
Sbjct: 404 SVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMA 463

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           A++ G+E+H Y L++       V +A++DMY KCG L L+  +F  I AKD ++W  MI+
Sbjct: 464 AMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMIS 523

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
            +  +G   +A+  F +M   G++   V+  SVL AC+    +  G     ++  +  I 
Sbjct: 524 SFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVV-IKGPIR 582

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
             L   + ++D+  + GNL  A+R  E MP   + + W S++     +  VK +  +  H
Sbjct: 583 ADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIASYGAYGLVKESVSLLRH 641

Query: 653 VFE--LEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           + E   + D+  +  L++      +  E ++  R
Sbjct: 642 MQEEGFKADHVTFLALVSACAHAGQVQEGLRLFR 675



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 159/326 (48%), Gaps = 17/326 (5%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACF-SKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           ++ VL GC +   L  G  VH  A+ A   + + +    L+ MY        A+ VF  +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 329 GERSV---VSWTSMIAGYAREGVFDGAIRLFRGMVRE--GIEPDVYAITSILHACACDGL 383
              +    + W  +I G    G +  A+  +  M        PD +    ++ +CA  G 
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-- 441
           + +G+ VH   +   +   ++V +AL+ MYA  G + DA  VF+ M  +D V WN M+  
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 442 --------GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    A++LF  M     EP+  T+AC L   A+ + L  G ++H   +++G+ ++
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             VAN +V MY KC  L     LF ++P  DL++W  MI+G   +GF   A+  F DM++
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEG 578
           +GI PD V+ +S+L A +     ++G
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQG 367



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 27/288 (9%)

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSS-LYVSNALMDMYAKCGSMADAESVFNQM 429
           + ++L  C     L +G  VH       + ++   +   L+ MY       DA +VF+ +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 430 P---VKDIVSWN------TMIG----ALDLFVAMLQNFE---PDGVTMACILPACASLAA 473
           P       + WN      TM G    AL  ++ M  +     PD  T   ++ +CA+L A
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           +  GR +H      G+  D  V +A++ MY   G+L  AR +FD +  +D + W +M+ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           Y   G    A+  F DMR +G EP+  +      AC  S    E   FF +  +   ++ 
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATL-----ACFLSVSATESDLFFGVQLHTLAVKY 276

Query: 594 KLEHYAC----MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
            LE        +V + ++   L + ++   +MP   D   W  ++ GC
Sbjct: 277 GLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP-RDDLVTWNGMISGC 323



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 14/220 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N+ I  F + G  E+A+ +      E  K    T  S+L  CA L ++  GK++H ++
Sbjct: 517 TWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVV 576

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G +  D    S L+ M+  CG+L+   RVF  +       WN ++  Y   G  KES
Sbjct: 577 IK-GPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKES 635

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNC 237
           + L + MQ  G  AD  TF  ++   A  G   +V++  +LF  +++   ++     + C
Sbjct: 636 VSLLRHMQEEGFKADHVTFLALVSACAHAG---QVQEGLRLFRCMTEEYQIAPRMEHFAC 692

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           M+  Y   G  +K +E+   ++++ F  D      +L  C
Sbjct: 693 MVDLYSRAGKLDKAMEL---IVDMPFKPDAGIWGALLHAC 729


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/656 (35%), Positives = 368/656 (56%), Gaps = 46/656 (7%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS--G 276
           DA KLFDE+ +R+ +S+  +I GY  +    + +E+F  +   G  ++     T+L    
Sbjct: 91  DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLV 150

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
             +CG L +G  +HA   K            L+D YS CG +D A  VF+ +  + +VSW
Sbjct: 151 STDCGELGWG--IHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSW 208

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T M+  +A    F  A++LF  M   G +P+ +   S+  AC      ++GK VH    +
Sbjct: 209 TGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALK 268

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           +  +  LYV  AL+D+Y K G + DA   F ++P KD++ W+ MI           A+++
Sbjct: 269 SRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEM 328

Query: 447 FVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M Q    P+  T A +L ACA++  L  G +IH ++++ G+ +D  V+NA++D+Y K
Sbjct: 329 FFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAK 388

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE--------- 556
           CG +  +  LF   P ++ ++W  +I G+   G G  A+  F +M +  ++         
Sbjct: 389 CGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSA 448

Query: 557 ----------------------PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
                                 PD+++F+ VL AC+++GL+D+G  +F  M  +  IEP 
Sbjct: 449 LRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPC 508

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
           +EHY CMV LL R G+L +A + I+ +P  P   +W +LL  C IH++++L    A+ V 
Sbjct: 509 IEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVL 568

Query: 655 ELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG 714
           E+EP +   +VLL+N+YA A++W+ V  +R+ + R+G+KK PG SWIE +G V+ F  G 
Sbjct: 569 EMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGD 628

Query: 715 SSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILN 774
           +SHP  + I  +L+ L ++ K+ GY P     L++ ++ EKE  L  HSE+LA++FGI+ 
Sbjct: 629 TSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIR 688

Query: 775 LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            P+G  IR+ KNLR+C DCH   K +SK  +REIV+RD NRFHHF++G CSC  +W
Sbjct: 689 TPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 181/365 (49%), Gaps = 19/365 (5%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ +H   LK     ++   N LL+MY K   L  A ++F++M ER+ +S+ ++I GYA 
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
              F  AI LF  + REG E + +  T+IL         E+G  +H  I +   +S+ +V
Sbjct: 117 SVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFV 176

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNF 454
             AL+D Y+ CG +  A  VF+ +  KD+VSW  M+           AL LF  M +  F
Sbjct: 177 GTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGF 236

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
           +P+  T A +  AC  L A + G+ +HG  L+     D  V  A++D+Y K G +  AR 
Sbjct: 237 KPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARR 296

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
            F+ IP KD+I W+ MIA Y       +A+  F  MRQA + P++ +F SVL AC+    
Sbjct: 297 AFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACA---- 352

Query: 575 VDEGWRFFNMMR---YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
             EG    N +     +  +   +     ++D+ ++ G +  +       P   D T W 
Sbjct: 353 TMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVT-WN 411

Query: 632 SLLCG 636
           +++ G
Sbjct: 412 TVIVG 416



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 206/457 (45%), Gaps = 56/457 (12%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           AE  RF E   L     V    E  +++   + +IL+L       E G  +H+ I + G 
Sbjct: 115 AESVRFLEAIELF----VRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGH 170

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              +  +G+ L+  +  CG +   R VF+ I    +  W  ++  +++   FKE+L LF 
Sbjct: 171 E-SNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFS 229

Query: 188 KMQSLGIAADSYTFSCVLK-CLAV----VGNSRR-------------------------- 216
           +M+ +G   +++TF+ V K CL +    VG S                            
Sbjct: 230 QMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSG 289

Query: 217 -VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
            + DA + F+E+  +DV+ W+ MI+ Y  +  +++ +E+F +M       +  T  +VL 
Sbjct: 290 DIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQ 349

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            CA    L  G  +H   +K     ++  +N L+D+Y+KCG ++ ++ +F +   R+ V+
Sbjct: 350 ACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVT 409

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W ++I G+ + G  + A+RLF  M+   ++      +S L ACA    LE G  +H    
Sbjct: 410 WNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTV 469

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD------IVSWNTMI------GA 443
           + D  + + V +A     A  G +   ++ F  M ++D      I  +  M+      G 
Sbjct: 470 KPDKLTFVGVLSAC----ANAGLLDQGQAYFTSM-IQDHGIEPCIEHYTCMVWLLGRGGH 524

Query: 444 LDLFVAMLQN--FEPDGVTMACILPACASLAALERGR 478
           LD  V ++    F+P  +    +L AC     +E GR
Sbjct: 525 LDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGR 561



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 168/398 (42%), Gaps = 51/398 (12%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T+ S+ + C  L++ + GK VH    +S   +D  V G  L+ ++   GD+ + R
Sbjct: 237 KPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYV-GVALLDLYTKSGDIDDAR 295

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV-- 210
           R F +I    V  W+ ++  Y+++   KE++ +F +M+   +  + +TF+ VL+  A   
Sbjct: 296 RAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATME 355

Query: 211 ---VGNS---------------------------RRVKDAHKLFDELSDRDVVSWNCMIS 240
              +GN                             R++++ +LF E   R+ V+WN +I 
Sbjct: 356 GLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIV 415

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G++  G  EK L +F  ML         T  + L  CA+  AL  G  +H+  +K     
Sbjct: 416 GHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVK---PD 472

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKM-----GERSVVSWTSMIAGYAREGVFDGAIRL 355
           +++F   +L   +  G LD     F  M      E  +  +T M+    R G  D A++L
Sbjct: 473 KLTFVG-VLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKL 531

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
              +     +P V    ++L AC     +E+G+     + E + Q        L +MYA 
Sbjct: 532 IDEI---PFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKA-THVLLSNMYAT 587

Query: 416 CGSMADAESVFNQMPVKDI-----VSWNTMIGALDLFV 448
                +  SV   M  K +     +SW    G +  F 
Sbjct: 588 AKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFT 625



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 133/284 (46%), Gaps = 19/284 (6%)

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           E + +A  + L  C        GK +H  I +      L+  N L++MY K   + DA  
Sbjct: 35  EFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASK 94

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAA 473
           +F++MP ++ +S+ T+I           A++LFV +  +  E +      IL    S   
Sbjct: 95  LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDC 154

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
            E G  IH  I + G  ++  V  A++D Y  CG + +AR +FD I  KD++SWT M+  
Sbjct: 155 GELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTC 214

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM---RYECN 590
           +  +    +A+  F+ MR  G +P+  +F SV  AC      D G          RYE +
Sbjct: 215 FAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELD 274

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           +   +     ++DL +++G++ +A R  E +P   D   W  ++
Sbjct: 275 LYVGV----ALLDLYTKSGDIDDARRAFEEIP-KKDVIPWSFMI 313



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 59/133 (44%)

Query: 447 FVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
           FV  +   E +    A  L  C       RG+ +H  IL+ G   D    N +++MYVK 
Sbjct: 27  FVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKS 86

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             L  A  LFD +P ++ IS+  +I GY       +AI  F  + + G E +   F ++L
Sbjct: 87  DFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTIL 146

Query: 567 YACSHSGLVDEGW 579
                +   + GW
Sbjct: 147 KLLVSTDCGELGW 159


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 228/627 (36%), Positives = 354/627 (56%), Gaps = 12/627 (1%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVL 274
           +V  AH LFD + +R+VVSW+ +++GY+ NG + K + + K+M++ G  + +   +   +
Sbjct: 81  QVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAI 140

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S C + G +  GR  H   LK  FS      N L+ MYSKC  +  A+ V+ ++    +V
Sbjct: 141 SSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIV 200

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           ++ S+++     G     + + R MV E ++ D     +    CA    L +G  VH  +
Sbjct: 201 AYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKM 260

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
             +D++   YVS+A+++MY KCG    A  VF+ +  +++V W  ++           AL
Sbjct: 261 LTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEAL 320

Query: 445 DLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           +LF  M Q N + +  T A +L ACA L+A   G  +HG+  + G      V NA+++MY
Sbjct: 321 NLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMY 380

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            K G +  A+ +F  +  +D+I+W  MI G+  HG G  A+  F DM  A   P+ V+F 
Sbjct: 381 AKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFT 440

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            VL AC H GLV EG+ + + +  +  ++P LEHY C+V LLS+TG L+EA  F+   PV
Sbjct: 441 GVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPV 500

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
             D   W +LL  C +H    L   VAE V E++P++ G Y LL+N+YA+ ++W+ V K+
Sbjct: 501 KWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKV 560

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R+ +  + +KK PG SWIEI    +IF +  + HP   +    +K L   +K  GY P  
Sbjct: 561 RKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDI 620

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              L + ++ +KE  L  HSEKLA+A+G+L LP+  +I V KNLR+C DCH   + +SK 
Sbjct: 621 GAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKV 680

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             R IV+RD+NRFHHF+DGRCSC  +W
Sbjct: 681 TNRVIVVRDANRFHHFRDGRCSCLDYW 707



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 209/390 (53%), Gaps = 26/390 (6%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISF--NNTLLDMYSKCGDLDGAIRVFEK 327
           ++ +L   A+   L  G+ +H+  +    + E S    N+L++ Y+K   +  A  +F++
Sbjct: 32  LIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDR 91

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEI 386
           M ER+VVSW++++ GY   G     IRL + M+ EG + P+ Y +   + +C   G +E 
Sbjct: 92  MPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEE 151

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA--- 443
           G+  H  + +       YV NAL+ MY+KC  + DA  V+N++PV DIV++N+++ +   
Sbjct: 152 GRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVE 211

Query: 444 -------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                  L++  +M+ ++ + D VT       CASL  L  G  +HG +L   +  D  V
Sbjct: 212 NGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYV 271

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
           ++AI++MY KCG  ++AR +FD + +++++ WT ++A    +G   +A+  F+ M Q  +
Sbjct: 272 SSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENV 331

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA----CMVDLLSRTGNL 611
           + +E ++  +L AC  +GL     R    + +  + +   +H+      ++++ +++G++
Sbjct: 332 KSNEFTYAVLLNAC--AGL---SARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDI 386

Query: 612 SEAYR-FIEMMPVAPDATIWGSLLCGCRIH 640
             A + F +MM    D   W +++CG   H
Sbjct: 387 EAAKKVFSDMM--HRDIITWNAMICGFSHH 414



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 173/372 (46%), Gaps = 35/372 (9%)

Query: 106 CADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI 165
           C D   +E+G++ H ++ ++G    + V  + LV M+  C  +++   V+N++    +  
Sbjct: 143 CCDRGRVEEGRQCHGLLLKTGFSFHNYVRNA-LVSMYSKCSIVQDAMGVWNEVPVNDIVA 201

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF------------------------ 201
           +N ++    + G  +E L + + M S  +  D  TF                        
Sbjct: 202 YNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKML 261

Query: 202 SCVLKCLAVV--------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
           +  ++C A V        G   +   A  +FD L  R+VV W  +++    NG  E+ L 
Sbjct: 262 TSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALN 321

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           +F +M       +  T   +L+ CA   A   G  +H  + K+ F   +   N L++MY+
Sbjct: 322 LFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYA 381

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
           K GD++ A +VF  M  R +++W +MI G++  G+   A+ +F+ M+     P+    T 
Sbjct: 382 KSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTG 441

Query: 374 ILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           +L AC   GL++ G   +H  +K+  +Q  L     ++ + +K G + +A +     PVK
Sbjct: 442 VLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVK 501

Query: 433 -DIVSWNTMIGA 443
            D+V+W T++ A
Sbjct: 502 WDVVAWRTLLNA 513



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 145/312 (46%), Gaps = 39/312 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           YN+ +    E G L + +EVL S  SE  K D  T+ +   LCA LK L  G  VH  + 
Sbjct: 202 YNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKML 261

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            S +  D   + S ++ M+  CG     R VF+ + +  V +W  +M    + G F+E+L
Sbjct: 262 TSDVECD-AYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEAL 320

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGN------ 213
            LF KM+   + ++ +T++ +L   A                        +VGN      
Sbjct: 321 NLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMY 380

Query: 214 --SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
             S  ++ A K+F ++  RD+++WN MI G+  +G+ +K L VF++ML    + +  T  
Sbjct: 381 AKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFT 440

Query: 272 TVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG- 329
            VLS C + G +  G   +H    +      +     ++ + SK G L+ A R F +   
Sbjct: 441 GVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEA-RNFMRTAP 499

Query: 330 -ERSVVSWTSMI 340
            +  VV+W +++
Sbjct: 500 VKWDVVAWRTLL 511


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/784 (31%), Positives = 407/784 (51%), Gaps = 54/784 (6%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           TY ++L  C     ++    + + +   G +  D ++ + ++  +  CGDL     VF+ 
Sbjct: 143 TYVAVLGACGHPWEVD---TIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDG 199

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT-------------FSCV 204
           I      +WN ++          E+L LF++M+  G+  +  T             FS  
Sbjct: 200 ILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEA 259

Query: 205 LKCLA-------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
           L+  A                   + G   +V DA ++F+ + +RDVVSWN M++    N
Sbjct: 260 LRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACN 319

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA---CFSKEI 302
           G  +K  + F+EML +G      T V +L+ C     L  G  V   A++      S ++
Sbjct: 320 GFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDV 379

Query: 303 SFNNTLLDMYSKCGD----LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
                +++MYS+C         ++ + +   + S++ W ++++ Y     F+ A  +FR 
Sbjct: 380 VMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRL 439

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M+  G+  D  ++ ++ +AC     LE GK +H  + E+++     V NAL+ MYA+ GS
Sbjct: 440 MLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGS 499

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA-MLQNFEPDGVTMACILPA 467
           + DA  +F+ M  ++++SW  M+G          AL +F + +L+   P+ VT   +L A
Sbjct: 500 LEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNA 559

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C +LA++   + +   +   G   +  VAN ++    KCG L    + F ++  K+ +SW
Sbjct: 560 CGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSW 619

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
              IA    HG G   +  F  M+  GI+   V+ I VL +CSH+GLV +G+ +F  M  
Sbjct: 620 NTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHV 679

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI-WGSLLCGCRIHHEVKLA 646
           +     + EHY+C++DLLSR G L  A  F++ +P    +   W +LLCGC++H +++  
Sbjct: 680 DYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERG 739

Query: 647 EKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGK 706
            +  + +  L P +TG Y+++ N+YA A KW E   +R+ +   G KK PG SWIE+KG+
Sbjct: 740 GRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGR 799

Query: 707 VNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKL 766
           ++ F  G +SHP + +I   L+RL  EMKR G+    +  + +    EKE  LC HSEKL
Sbjct: 800 IHEFRVGDTSHPRSSEIHRELERLNEEMKRAGFVCDIKAVVYDLQAKEKESLLCQHSEKL 859

Query: 767 AMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           A+AFG+++  AG+ +R+ KNLRVC DCH   KF+S    REIV+RD+ RFHHF+ G CSC
Sbjct: 860 AIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSC 919

Query: 827 RGFW 830
             FW
Sbjct: 920 EDFW 923



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 159/581 (27%), Positives = 269/581 (46%), Gaps = 58/581 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+ +++  CA L  L  G+++H +I  +GI + D  LG++L+ M+  CG  +E R V
Sbjct: 39  DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGD-FLGARLLAMYCKCGSPEEARAV 97

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL--------- 205
           F  I +  V  W  L+   +++G+ KE+ +LF++MQ  G+  +  T+  VL         
Sbjct: 98  FQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEV 157

Query: 206 ---------------------KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
                                  +   G    +  A  +FD +  RD   WN MIS  +A
Sbjct: 158 DTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVA 217

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           +   ++ LE+F++M   G   +  T V  L+ C +         +HAFA +     +   
Sbjct: 218 HEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVV 277

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
              L++MY K G +D A  +FE++ ER VVSW +M+   A  G  D A + FR M+  G 
Sbjct: 278 QTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGE 337

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS-------LYVSNALMDMYAKCG 417
            P      +IL+AC     L+ G    D++K   ++         + +  A+M+MY++C 
Sbjct: 338 LPSRITYVAILNACFLAAHLKHG----DFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCK 393

Query: 418 SMADAES----VFNQMPVKDIVSWNTMIG----------ALDLF-VAMLQNFEPDGVTMA 462
           S   A S    +        I+ WNT++           A  +F + +L     D V++ 
Sbjct: 394 SPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLM 453

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            +  AC S A+LE+G+ IH  +    ++    V NA+V MY + G L  AR +FD +  +
Sbjct: 454 TVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTR 513

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           ++ISWT M+  +   G   +A+  F  +   G+ P+EV+F +VL AC +   +    +  
Sbjct: 514 NVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAA-KLV 572

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
                E      +E    ++  L + G+L E   F ++M V
Sbjct: 573 QACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAV 613



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 171/388 (44%), Gaps = 20/388 (5%)

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
           + D +T   ++  CA    L  GR +H   L+            LL MY KCG  + A  
Sbjct: 37  SADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARA 96

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF+ + ++SVV+WTS+I   AR G    A  LFR M  +G+ P+     ++L AC     
Sbjct: 97  VFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHP-- 154

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
            E+            ++  + V+ A+M+ Y KCG +  A  VF+ + V+D   WN MI  
Sbjct: 155 WEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISL 214

Query: 443 ---------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    AL+LF  M L    P+  T    L AC           IH +       AD
Sbjct: 215 LVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDAD 274

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             V  A+V+MY K G +  A  +F+ I  +D++SW  M+     +GF   A   F +M  
Sbjct: 275 TVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLL 334

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE--CNIEP-KLEHYACMVDLLSRTG 609
            G  P  ++++++L AC  +  +  G  F   +  E  C IE   +     ++++ SR  
Sbjct: 335 VGELPSRITYVAILNACFLAAHLKHG-DFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCK 393

Query: 610 NLSEAYR---FIEMMPVAPDATIWGSLL 634
           +   A+     +E     P   +W ++L
Sbjct: 394 SPKSAFSSSLLLEQDRDQPSIMMWNTVL 421



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 167/377 (44%), Gaps = 47/377 (12%)

Query: 43  HSSCTINPISASISKTLVCKTKN------YNAEIGRFCEVGNLEKAMEV--LYSSEKSKI 94
           +S C  +P SA  S  L+ + ++      +N  +  + E    E+A  +  L       I
Sbjct: 389 YSRCK-SPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTI 447

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           DT +  ++   C    SLE GK +HS++ ES +     V  + LV M+   G L++ R +
Sbjct: 448 DTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNA-LVTMYARLGSLEDAREI 506

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-------- 206
           F+ +    V  W  ++  +S+ G  +E+L +F+ +   G+A +  TF+ VL         
Sbjct: 507 FDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASI 566

Query: 207 --------CLAVVGNSRRVKDAHKL----------------FDELSDRDVVSWNCMISGY 242
                   CL+  G    V+ A+ L                F  ++ ++ VSWN  I+  
Sbjct: 567 PAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAAN 626

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA-FALKACFSKE 301
             +G   +G+E+F+ M   G +    T++ VLS C++ G +  G +      +   F  E
Sbjct: 627 AQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAE 686

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKM--GERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
               + ++D+ S+ G L+ A    +++  G++SV  W +++ G    G  +   R  + +
Sbjct: 687 AEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRI 746

Query: 360 VREGIEPDVYAITSILH 376
           +  G+ P       ++H
Sbjct: 747 L--GLNPGSTGPYLVMH 761


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/764 (33%), Positives = 400/764 (52%), Gaps = 89/764 (11%)

Query: 79  LEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           L +A+++LYS   +  D   Y  ++  CA        K++ S +  +     D  + ++L
Sbjct: 7   LHQAIDLLYSHGLASFDD--YTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQL 64

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS 198
           + ++   G L + + VF+ +    V+ WN L+  Y+K G                     
Sbjct: 65  LHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMG--------------------- 103

Query: 199 YTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
                             V++ H +FD++  RD VS+N +I+ + +NG + K L+V   M
Sbjct: 104 -----------------MVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRM 146

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
              GF     + V  L  C+    L  G+ +H   + A   +     N + DMY+KCGD+
Sbjct: 147 QEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDI 206

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
           D A  +F+ M +++VVSW  MI+GY + G  +  I LF  M   G++PD+  ++++L+A 
Sbjct: 207 DKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA- 265

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
                                             Y +CG + DA ++F ++P KD + W 
Sbjct: 266 ----------------------------------YFRCGRVDDARNLFIKLPKKDEICWT 291

Query: 439 TMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH 487
           TMI           A  LF  ML+ N +PD  T++ ++ +CA LA+L  G+ +HG ++  
Sbjct: 292 TMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVM 351

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           GI     V++A+VDMY KCGV + AR +F+ +P +++I+W  MI GY  +G   +A+  +
Sbjct: 352 GIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLY 411

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
             M+Q   +PD ++F+ VL AC ++ +V EG ++F+ +  E  I P L+HYACM+ LL R
Sbjct: 412 ERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSIS-EHGIAPTLDHYACMITLLGR 470

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
           +G++ +A   I+ MP  P+  IW +LL  C    ++K AE  A H+FEL+P N G Y++L
Sbjct: 471 SGSVDKAVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPYIML 529

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLL 727
           +N+YA   +W++V  +R  +  +  KK    SW+E+  KV+ FV+    HP   KI   L
Sbjct: 530 SNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGEL 589

Query: 728 KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG-QTIRVTKN 786
            RL   +++ GY P T   L N  E EK  ++  HSEKLA+AF ++  P G   IR+ KN
Sbjct: 590 NRLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIKN 649

Query: 787 LRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +RVC DCH   KF S T  R I++RDSNRFHHF  G+CSC   W
Sbjct: 650 IRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 189/380 (49%), Gaps = 7/380 (1%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSI--LQLCADLKSLEDGKKVHSII 122
           +YN  I  F   G+  KA++VL   ++       Y  +  LQ C+ L  L  GK++H  I
Sbjct: 122 SYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRI 181

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             + +  ++  + + +  M+  CGD+ + R +F+ + +  V  WNL++  Y K GN  E 
Sbjct: 182 VVADLG-ENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNEC 240

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
           ++LF +MQ  G+  D  T S VL      G   RV DA  LF +L  +D + W  MI GY
Sbjct: 241 IHLFNEMQLSGLKPDLVTVSNVLNAYFRCG---RVDDARNLFIKLPKKDEICWTTMIVGY 297

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             NG  E    +F +ML      D  T+ +++S CA   +L  G+ VH   +       +
Sbjct: 298 AQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSM 357

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
             ++ L+DMY KCG    A  +FE M  R+V++W +MI GYA+ G    A+ L+  M +E
Sbjct: 358 LVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQE 417

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
             +PD      +L AC    +++ G+   D I E+ +  +L     ++ +  + GS+  A
Sbjct: 418 NFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKA 477

Query: 423 ESVFNQMPVK-DIVSWNTMI 441
             +   MP + +   W+T++
Sbjct: 478 VDLIQGMPHEPNYRIWSTLL 497


>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/636 (37%), Positives = 347/636 (54%), Gaps = 78/636 (12%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM-GE 330
           T+L   ++  +    + +HA  L+       S  +T+L +YS    L  ++ +F  +   
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTSLPSP-SLLSTILSIYSNLNLLHDSLLIFNSLPSP 68

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
            + ++W S+I  Y   G+F  ++  F  M+  G  PD     S+L +C     L  G+ V
Sbjct: 69  PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAES-------------------------- 424
           H  I    M   LY  NALM+MY+K  S+ +  +                          
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188

Query: 425 ---VFNQMPVKDIVSWNTMI------GALDLFVAMLQ-----NFEPDGVTMACILPACAS 470
              VF  MP +DIVSWNT+I      G  +  + M++     +  PD  T++ +LP  A 
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
              L +G+EIHGY +R+G  AD  + ++++DMY KC  +  +  +F M+P  D ISW  +
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308

Query: 531 IAGYGMHGFGCDAIATFNDM------------------------------------RQAG 554
           IAG   +G   + +  F  M                                    R  G
Sbjct: 309 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRMEG 368

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           ++P+ V+F++VL ACSH+GLVDE W++FN M  +  I P LEHYA + DLL R G L EA
Sbjct: 369 VKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEA 428

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           Y FI  M + P  ++W +LL  CR+H  ++LAEKV++ +F ++P N G YVLL+N+Y+ A
Sbjct: 429 YEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAA 488

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +W++ +KLR  +  +G+KK P CSWIEIK KV+ FVAG  SHP+  +I   LK L  +M
Sbjct: 489 GRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQM 548

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           +REGY   T   L + +E +K   LC HSE+LA+ FGI++ PAG TIRVTKNLRVC DCH
Sbjct: 549 EREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCH 608

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              KF+SK   REIV+RD++RFHHFKDG+CSC  FW
Sbjct: 609 TATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 182/402 (45%), Gaps = 59/402 (14%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D   + S+L+ C  +K L  G+ VH  I   G+  D             TC         
Sbjct: 105 DHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFD-----------LYTC--------- 144

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
                       N LM+ YSK  + +E +  +KK+   G  +D Y  S   K    +G+ 
Sbjct: 145 ------------NALMNMYSKFWSLEE-VNTYKKVFDEGKTSDVY--SKKEKESYYLGSL 189

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           R+V      F+ +  RD+VSWN +ISG   NG+ E  L + +EM N     D  T+ +VL
Sbjct: 190 RKV------FEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 243

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
              A    L+ G+ +H +A++  +  ++   ++L+DMY+KC  +D + RVF  + +   +
Sbjct: 244 PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGI 303

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW S+IAG  + G+FD  ++ F+ M+   I+P+  + +SI+ ACA    L +GK +H YI
Sbjct: 304 SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 363

Query: 395 KENDMQSSLYVSNALMDMYAKC---GSMADAESVFNQMP--VKDIVSWNTMIGALDLF-- 447
              +     YV  A M +   C   G + +A   FN M    + I          DL   
Sbjct: 364 IRMEGVKPNYV--AFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGR 421

Query: 448 VAMLQ---------NFEPDGVTMACILPACASLAALERGREI 480
           V  L+         + EP G   + +L AC     +E   ++
Sbjct: 422 VGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKV 463


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/668 (36%), Positives = 386/668 (57%), Gaps = 45/668 (6%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN-GKVFIWNLLMHEY 173
           G+++H  I  + +   D  L + L+ M+ +C    E   +F K++N   +  WN+++  +
Sbjct: 161 GRQIHGYIIRN-MFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGF 219

Query: 174 SKTGNFKESLYLFK--KMQSLGIAADSYT-------------FSCVLKC----------- 207
            + G +++SL L+   K ++  + + S+T             F   + C           
Sbjct: 220 VENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDP 279

Query: 208 ------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                 L +   S  V+DA K+FD++ D++V   N MIS +I NG A   L ++ +M   
Sbjct: 280 YVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAG 339

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
              VD  T+ ++LSGC+  G+  FGR VHA  +K      ++  + LL MY KCG  + A
Sbjct: 340 ETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDA 399

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             VF  M ER VV+W SMIAG+ +   F  A+ LFR M +EG++ D   +TS++ A    
Sbjct: 400 DSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGL 459

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             +E+G  +H +  +  ++S ++V+ +L+DMY+K G    AE VF+ MP K++V+WN+MI
Sbjct: 460 ENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMI 519

Query: 442 G----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      +++L   +LQ+ F  D V++  +L A +S+AAL +G+ +H Y +R  I 
Sbjct: 520 SCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIP 579

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
           +D  V NA++DMYVKCG L  A+ +F+ +P ++L++W  MIAGYG HG   +A+  F +M
Sbjct: 580 SDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEM 639

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
           +++   PDEV+F++++ +CSHSG+V+EG   F +MR E  +EP++EHYA +VDLL R G 
Sbjct: 640 KRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGR 699

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
           L +AY FI  MP+  D ++W  LL  CR H  ++L E VA+++ ++EP     YV L N+
Sbjct: 700 LDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNL 759

Query: 671 YAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL 730
           Y E E W+    LR  +  RGLKK+PGCSWIE+K +V++F +G SS     +I   L  L
Sbjct: 760 YGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSL 819

Query: 731 RLEMKREG 738
           +  M+ +G
Sbjct: 820 KSNMEGKG 827



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 183/640 (28%), Positives = 313/640 (48%), Gaps = 43/640 (6%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICE 124
           N++I    + G   +A+E+   +  S + T   T+ S+L+ CA L +L  G+ +H+ I  
Sbjct: 24  NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVT 83

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK-----VFIWNLLMHEYSKTGNF 179
            G+   D  + + L+ M+V CG L    +VF+K+   +     + +WN ++  Y K G+F
Sbjct: 84  MGLQ-SDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHF 142

Query: 180 KESLYLFKKMQSLG----------------IAADSYTFSCVLKCLAVVGNSRRVKDAHKL 223
           +E L  F +MQ L                    D Y  + ++    +  +  R  +A  L
Sbjct: 143 EEGLAQFCRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALI---GMYSSCSRPMEAWSL 199

Query: 224 FDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           F +L +R ++V+WN MI G++ NG+ EK LE++    N    +  A+     + C++   
Sbjct: 200 FGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEV 259

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L FGR VH   +K  F  +     +LL MY+K G ++ A +VF+++ ++ V    +MI+ 
Sbjct: 260 LDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISA 319

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           +   G    A+ L+  M       D + I+S+L  C+  G  + G+ VH  + +  MQS+
Sbjct: 320 FIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSN 379

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-L 451
           + + +AL+ MY KCGS  DA+SVF  M  +D+V+W +MI           ALDLF AM  
Sbjct: 380 VAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEK 439

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
           +  + D   M  ++ A   L  +E G  IHG+ ++ G+ +D  VA ++VDMY K G    
Sbjct: 440 EGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAES 499

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A  +F  +P K+L++W  MI+ Y  +G    +I     + Q G   D VS  +VL A S 
Sbjct: 500 AEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSS 559

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
              + +G +  +  +    I   L+    ++D+  + G L  A    E MP   +   W 
Sbjct: 560 VAALLKG-KTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMP-RRNLVTWN 617

Query: 632 SLLCGCRIHHEVKLAEKVAEHV--FELEPDNTGYYVLLAN 669
           S++ G   H   + A ++ + +   E  PD   +  L+ +
Sbjct: 618 SMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITS 657



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 184/420 (43%), Gaps = 38/420 (9%)

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           S N  I   +  G   + LE+  +  +        T  ++L  CA+   L  GR +HA  
Sbjct: 22  SINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI 81

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-----SVVSWTSMIAGYAREGV 348
           +      +     +L++MY KCG L  A++VF+KM E       +  W  +I GY + G 
Sbjct: 82  VTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH 141

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
           F+  +  F  M     E   Y                 G+ +H YI  N  +   Y+  A
Sbjct: 142 FEEGLAQFCRMQ----ELSWYM---------------AGRQIHGYIIRNMFEGDPYLETA 182

Query: 409 LMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIG----------ALDLF-VAMLQNFEP 456
           L+ MY+ C    +A S+F ++  + +IV+WN MIG          +L+L+ +A  +N + 
Sbjct: 183 LIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKL 242

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
              +      AC+    L+ GR++H  +++     D  V  +++ MY K G +  A+ +F
Sbjct: 243 VSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVF 302

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           D +  K++     MI+ +  +G   DA+  +N M+      D  +  S+L  CS  G  D
Sbjct: 303 DQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYD 362

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            G R  +    + +++  +   + ++ +  + G+  +A      M    D   WGS++ G
Sbjct: 363 FG-RTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMK-ERDVVAWGSMIAG 420


>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
           [Vitis vinifera]
 gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/543 (41%), Positives = 327/543 (60%), Gaps = 15/543 (2%)

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS---WTSMIAGYAREGVFDGAIRLFRGM 359
           +    L+ ++S C  +D A RVFE  GE   +    W +M  GY+R G    A+ L+  M
Sbjct: 110 TLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEM 169

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           V +  +   +A +  L AC+  G L+ G+ VH  + +        V+NAL+ +Y++ G  
Sbjct: 170 VCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCF 229

Query: 420 ADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEP-----------DGVTMACILPAC 468
            +A  VF+ MP +++VSWN++I  L     + +  E              VT+  ILP C
Sbjct: 230 DEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVC 289

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A + AL  G+EIH  I++     D  V N++VDMY KCG +   R +F+ +  KDL SW 
Sbjct: 290 ARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWN 349

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            +I GY ++G   +A+ +F +M  +G  PD ++FI++L  CSH+GL D+G R F MM+ +
Sbjct: 350 TLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMD 409

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             I P +EHYAC+VD+L R G + EA   ++ MP  P  +IWGSLL  CR+H  V LAE 
Sbjct: 410 YGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEA 469

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
           VA+ +FELEP+N G YV+L+N+YA A  WE VK +RE + +RG+ K  GCSW++IK K++
Sbjct: 470 VAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIH 529

Query: 709 IFVAGGSSH-PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
            FVAGGS+   ++ + + + KRL   M+  GY P T   L +  E  + + +CGHSE+LA
Sbjct: 530 TFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLA 589

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
             F ++N  +G  IR+TKNLRVC DCH   K +SK   R IVLRD+NRFHHFKDG CSC+
Sbjct: 590 TMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCSCK 649

Query: 828 GFW 830
            +W
Sbjct: 650 DYW 652



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 171/341 (50%), Gaps = 18/341 (5%)

Query: 215 RRVKDAHKLFD---ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
           RRV +A ++F+   E  D     W  M  GY  NG  ++ L ++ EM+     +      
Sbjct: 123 RRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFS 182

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
             L  C++ G L  GRAVHA  LKA    +   NN LL +YS+ G  D A+RVF+ M  R
Sbjct: 183 MALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHR 242

Query: 332 SVVSWTSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +VVSW S+IAG  + +GVF+ AI  FR M  +G+      +T+IL  CA    L  GK++
Sbjct: 243 NVVSWNSLIAGLVKKDGVFE-AIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEI 301

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I ++  +    V N+L+DMYAKCG+M     VFN M  KD+ SWNT+I         
Sbjct: 302 HAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRM 361

Query: 443 --ALDLFVAML-QNFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANA 498
             A++ F  M+   F PDG+T   +L  C+     + G R      + +GIS        
Sbjct: 362 TEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYAC 421

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
           +VD+  + G +  A  +   +P K   S W  ++    +HG
Sbjct: 422 LVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHG 462



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 211/462 (45%), Gaps = 54/462 (11%)

Query: 34  LPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVL-YSSEKS 92
           LP I  S + +  T   I+A+ + T + K + +N+ +    + G L++A+ ++ Y   KS
Sbjct: 4   LPAISLSTNITVST--NITATSAPTTLHKHRLHNSTLKSLSKSGKLDEALRLIEYWPSKS 61

Query: 93  KI---DTKTYCSILQLCADLKSLEDGKKVHSII------CESGIVIDDGVLGSKLVFMFV 143
                D +     L  C   K+LE G++++  +      C   + +++  L  KL+ +F 
Sbjct: 62  PATAPDVEACALFLHSCISRKALEHGQRLYLQLLLYRDRCNHNL-LNNPTLKGKLITLFS 120

Query: 144 TCGDLKEGRRVFNKIDNGKVF-----IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS 198
            C  + E RRVF   D G+       +W  +   YS+ G  KE+L L+ +M        +
Sbjct: 121 VCRRVDEARRVFE--DGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGN 178

Query: 199 YTFSCVLKCLAVVGNSRRVKDAH--------------------------------KLFDE 226
           + FS  LK  + +G+ +  +  H                                ++FD 
Sbjct: 179 FAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDG 238

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           +  R+VVSWN +I+G +      + +E F+ M   G      T+ T+L  CA   AL  G
Sbjct: 239 MPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSG 298

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           + +HA  +K+    +    N+L+DMY+KCG +D   RVF  M  + + SW ++I GYA  
Sbjct: 299 KEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAIN 358

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYV 405
           G    A+  F+ M+  G  PD     ++L  C+  GL + G  + + +K +  +  ++  
Sbjct: 359 GRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEH 418

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALDL 446
              L+D+  + G + +A  +   MP K   S W +++ +  L
Sbjct: 419 YACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRL 460



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 146/338 (43%), Gaps = 50/338 (14%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           L+ C+DL  L+ G+ VH+ + ++     D V+ + L+ ++   G   E  RVF+ + +  
Sbjct: 185 LKACSDLGDLQTGRAVHAQVLKA-TEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRN 243

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH- 221
           V  WN L+    K     E++  F+ MQ  G+     T + +L   A V      K+ H 
Sbjct: 244 VVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHA 303

Query: 222 -------------------------------KLFDELSDRDVVSWNCMISGYIANGVAEK 250
                                          ++F+ +  +D+ SWN +I+GY  NG   +
Sbjct: 304 VIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTE 363

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLL 309
            +E F+EM+  GF+ D  T + +LSGC++ G    G R      +    S  +     L+
Sbjct: 364 AMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLV 423

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAGYAREGVFD----GAIRLFRGMVREGI 364
           D+  + G +  A+ + + M  +   S W S++      G        A RLF       +
Sbjct: 424 DVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFE------L 477

Query: 365 EPD---VYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           EP+    Y + S ++A A  G+ E  K V +++++  M
Sbjct: 478 EPNNAGNYVMLSNIYANA--GMWESVKVVREFMEKRGM 513



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 154/356 (43%), Gaps = 28/356 (7%)

Query: 338 SMIAGYAREGVFDGAIRL--FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           S +   ++ G  D A+RL  +         PDV A    LH+C     LE G+ ++  + 
Sbjct: 36  STLKSLSKSGKLDEALRLIEYWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQLL 95

Query: 396 ------ENDMQSSLYVSNALMDMYAKCGSMADAESVF----NQMPVKDIVSWNTM-IG-- 442
                  +++ ++  +   L+ +++ C  + +A  VF      + + + V W  M IG  
Sbjct: 96  LYRDRCNHNLLNNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESV-WVAMGIGYS 154

Query: 443 -------ALDLFVAMLQNFEPDG-VTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  AL L+  M+  F   G    +  L AC+ L  L+ GR +H  +L+     D+ 
Sbjct: 155 RNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQV 214

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V NA++ +Y + G    A  +FD +P ++++SW  +IAG        +AI  F  M+  G
Sbjct: 215 VNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKG 274

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           +    V+  ++L  C+    +  G +  + +  +   +P       +VD+ ++ G +   
Sbjct: 275 MGFSWVTLTTILPVCARVTALGSG-KEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYC 333

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA-EKVAEHVFE-LEPDNTGYYVLLA 668
            R    M    D T W +L+ G  I+  +  A E   E +     PD   +  LL+
Sbjct: 334 RRVFNGMQ-GKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLS 388



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 44/300 (14%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  +IL +CA + +L  GK++H++I +S    D  VL S LV M+  CG +   RRVFN 
Sbjct: 281 TLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNS-LVDMYAKCGAMDYCRRVFNG 339

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +    +  WN L+  Y+  G   E++  F++M   G + D  TF  +L   +  G     
Sbjct: 340 MQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAG---LA 396

Query: 218 KDAHKLFDELS-----DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
            D  +LF+ +         V  + C++      G  ++ LE+ K   N+ F    +   +
Sbjct: 397 DDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVK---NMPFKPTGSIWGS 453

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNT-----LLDMYSKCGDLDGAIRVFEK 327
           +L+ C   G +    AV     K  F  E+  NN      L ++Y+  G  +    V E 
Sbjct: 454 LLNSCRLHGNVPLAEAV----AKRLF--ELEPNNAGNYVMLSNIYANAGMWESVKVVREF 507

Query: 328 MGERSVV-----SWT-------SMIAGYAREGVFDGAI-------RLFRGMVREGIEPDV 368
           M +R +      SW        + +AG + E  F  ++       RL   M   G  PD 
Sbjct: 508 MEKRGMTKEAGCSWLQIKSKIHTFVAGGSNE--FRNSVEYKKVWKRLMEAMEEVGYVPDT 565


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 725

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/660 (35%), Positives = 364/660 (55%), Gaps = 49/660 (7%)

Query: 220 AHKLFDELSD-RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           A  LF  +S   + + +N ++     +G     +  ++ + ++G   D  +   +L   +
Sbjct: 66  ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
              AL  G  +H FA K     +      L+DMY+ CG ++ A  VF++M +R VV+W +
Sbjct: 126 KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNT 185

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           MI  Y R G+ D A +LF  M    + PD   + +I+ AC   G +   + ++D++ END
Sbjct: 186 MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEND 245

Query: 399 MQ-------------------------------SSLYVSNALMDMYAKCGSMADAESVFN 427
           ++                                +L+VS A++  Y+K G + DA  +F+
Sbjct: 246 VRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFD 305

Query: 428 QMPVKDIVSWNTMIGA----------LDLFVAML-QNFEPDGVTMACILPACASLAALER 476
           Q  +KD+V W TMI A          L +F  M     +PD VTM  ++ AC +L  L++
Sbjct: 306 QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDK 365

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
            + +H Y   +G+ +   + NA+++MY KCG L  AR +F+ +P ++++SW+ MI  + M
Sbjct: 366 AKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAM 425

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG   D+++ F  M+Q  +EP+EV+F+ VLY CSHSGLV+EG + F  M  E NI PK+E
Sbjct: 426 HGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIE 485

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HY CMVDL  R   L EA   IE MP+AP+  IWGSL+  CR+H E++L E  A+ + +L
Sbjct: 486 HYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKL 545

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           EPD+ G  VL++N+YA   +W+ V+ +R  + ++ + K  G S I++ GK + F+ G   
Sbjct: 546 EPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKR 605

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           H  + +I + L  +  ++K  GY P     L++ +E EK+  +  HSEKLA+ FG++N  
Sbjct: 606 HKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKE 665

Query: 777 AGQ------TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             +       IR+ KNLRVC DCH   K +SK    EI++RD  RFH +KDG CSCR +W
Sbjct: 666 KEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 181/416 (43%), Gaps = 66/416 (15%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  ++  IL+  + + +L +G ++H    +    + D  + + L+ M+  CG +   R
Sbjct: 111 RFDRISFPPILKAVSKVSALFEGMELHGFAFKIA-TLSDPFVETGLMDMYAACGRINYAR 169

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            VF+++    V  WN ++  Y + G   E+  LF++M+   +  D      ++      G
Sbjct: 170 NVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG 229

Query: 213 NSRRVK-------------DAHKL-------------------FDELSDRDVVSWNCMIS 240
           N R  +             D H L                   F ++S R++     M+S
Sbjct: 230 NMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVS 289

Query: 241 GYIANGV-------------------------------AEKGLEVFKEMLNLGFNVDLAT 269
           GY   G                                 ++ L VF+EM   G   D+ T
Sbjct: 290 GYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVT 349

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           M++V+S C N G L   + VH +         +  +N L++MY+KCG LD A  VFEKM 
Sbjct: 350 MLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMP 409

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            R+VVSW+SMI  +A  G    ++ LF  M +E +EP+      +L+ C+  GL+E GK 
Sbjct: 410 TRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 469

Query: 390 VH-DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
           +      E ++   +     ++D++ +   + +A  V   MP+  ++V W +++ A
Sbjct: 470 IFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSA 525


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/718 (34%), Positives = 385/718 (53%), Gaps = 50/718 (6%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------- 215
           V  WN L+  Y++ G + E + LFK+ +   +  D +TFS  L       + R       
Sbjct: 6   VVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHA 65

Query: 216 -------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
                                    R+  A  +F+   + D VSWN +I+GY+  G  ++
Sbjct: 66  LITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDE 125

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCAN--CGALMFGRAVHAFALKACFSKEISFNNTL 308
            L +  +ML  G N++   + + L  C +    ++  G+ +H  A+K     ++     L
Sbjct: 126 MLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTAL 185

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR-----EGVFDGAIRLFRGMVREG 363
           LD Y+K GDL+ A ++F+ M + +VV + +MIAG+ +     +   + A+ LF  M   G
Sbjct: 186 LDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRG 245

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           ++P  +  +SIL AC+     E GK +H  I + ++QS  ++ NAL+++Y+  GS+ D  
Sbjct: 246 MKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGL 305

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVTMACILPACASLA 472
             F+  P  D+VSW ++I          G L LF  +L    +PD  T++ +L ACA+LA
Sbjct: 306 KCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLA 365

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           A++ G +IH Y ++ GI     + N+ + MY KCG +  A   F      D++SW++MI+
Sbjct: 366 AVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMIS 425

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
               HG   +A+  F  M+ +GI P+ ++F+ VL ACSH GLV+EG R+F +M+ +  I 
Sbjct: 426 SNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGIT 485

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P ++H AC+VDLL R G L+EA  FI       D  +W SLL  CR+H      ++VAE 
Sbjct: 486 PNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAER 545

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           V ELEP+    YVLL N+Y +A       ++R  +  RG+KK PG SWIE+   V+ FVA
Sbjct: 546 VIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVA 605

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  SHP+++ I   L+ +  E+K+  Y  +   +  +  + +    +  HSEKLA+ FGI
Sbjct: 606 GDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNSMVSYHSEKLAVTFGI 665

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           ++LP    +RV KNLR C  CHE  K  S+   REI+LRD  RFH F+DG CSC  +W
Sbjct: 666 ISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 723



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 186/370 (50%), Gaps = 18/370 (4%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           +  R+VVSWN +ISGY   G   + + +FKE       +D  T    LS C     L  G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           R +HA    +     +   N+L+DMY KCG +D A  VFE   E   VSW S+IAGY R 
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACD--GLLEIGKDVHDYIKENDMQSSLY 404
           G  D  +RL   M+R G+  + YA+ S L AC  +    +E GK +H    +  +   + 
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------------ALDLFVA 449
           V  AL+D YAK G + DA  +F  MP  ++V +N MI                A+ LF  
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240

Query: 450 ML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M  +  +P   T + IL AC+++ A E G++IH  I ++ + +D  + NA+V++Y   G 
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGS 300

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +      F   P  D++SWT +I G+  +G     +  F+++  +G +PDE +   +L A
Sbjct: 301 IEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSA 360

Query: 569 CSHSGLVDEG 578
           C++   V  G
Sbjct: 361 CANLAAVKSG 370



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 240/527 (45%), Gaps = 55/527 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  + ++G   + M +   +  S  ++D  T+ + L +C     L  G+ +H++I
Sbjct: 8   SWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALI 67

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG+     +L + L+ M+  CG +   R VF   D      WN L+  Y + G+  E 
Sbjct: 68  TVSGLG-GPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEM 126

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA--------------------------VVGNSR- 215
           L L  KM   G+  +SY     LK                             VVG +  
Sbjct: 127 LRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALL 186

Query: 216 -------RVKDAHKLFDELSDRDVVSWNCMISGYI-----ANGVAEKGLEVFKEMLNLGF 263
                   ++DA K+F  + D +VV +N MI+G++     A+  A + + +F EM + G 
Sbjct: 187 DTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGM 246

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
                T  ++L  C+   A   G+ +HA   K     +    N L+++YS  G ++  ++
Sbjct: 247 KPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLK 306

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
            F    +  VVSWTS+I G+ + G F+G + LF  ++  G +PD + I+ +L ACA    
Sbjct: 307 CFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAA 366

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           ++ G+ +H Y  +  + +   + N+ + MYAKCG +  A   F +    DIVSW+ MI  
Sbjct: 367 VKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISS 426

Query: 443 ---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISA 491
                    A+DLF  M      P+ +T   +L AC+    +E G      + + HGI+ 
Sbjct: 427 NAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITP 486

Query: 492 DRNVANAIVDMYVKCGVLVLARS-LFDMIPAKDLISWTIMIAGYGMH 537
           +   +  IVD+  + G L  A S + D     D + W  +++   +H
Sbjct: 487 NVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVH 533



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 161/327 (49%), Gaps = 20/327 (6%)

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M +R+VVSW S+I+GY + G +   + LF+      +  D +  ++ L  C     L +G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA---- 443
           + +H  I  + +   + ++N+L+DMY KCG +  A  VF      D VSWN++I      
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 444 ------LDLFVAMLQN-FEPDGVTMACILPACAS--LAALERGREIHGYILRHGISADRN 494
                 L L V ML++    +   +   L AC S   +++E G+ +HG  ++ G+  D  
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM-----HGFGCDAIATFND 549
           V  A++D Y K G L  A  +F ++P  +++ +  MIAG+         F  +A+  F +
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M+  G++P E +F S+L ACS     + G +    + ++ N++        +V+L S +G
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQI-FKYNLQSDEFIGNALVELYSLSG 299

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCG 636
           ++ +  +     P   D   W SL+ G
Sbjct: 300 SIEDGLKCFHSTP-KLDVVSWTSLIVG 325



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 16/268 (5%)

Query: 77  GNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGS 136
           G L    E+L+S  K   D  T   +L  CA+L +++ G+++H+   ++GI  +  ++ +
Sbjct: 334 GGLTLFHELLFSGRKP--DEFTISIMLSACANLAAVKSGEQIHAYAIKTGIG-NFTIIQN 390

Query: 137 KLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA 196
             + M+  CGD+      F +  N  +  W++++   ++ G  KE++ LF+ M+  GIA 
Sbjct: 391 SQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAP 450

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN--GVAEKGLEV 254
           +  TF   L  L    +   V++  + F+ +     ++ N   S  I +  G A +  E 
Sbjct: 451 NHITF---LGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEA 507

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL-DMYS 313
              +++ GF  D     ++LS C    A   G+ V    ++     E + +  LL ++Y+
Sbjct: 508 ESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIE--LEPEAAASYVLLYNIYN 565

Query: 314 KCGDLDGAIRVFEKMGERSV-----VSW 336
             G    A  +   M +R V     +SW
Sbjct: 566 DAGIQMPATEIRNLMKDRGVKKEPGLSW 593


>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
 gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
          Length = 650

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 219/541 (40%), Positives = 335/541 (61%), Gaps = 17/541 (3%)

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR-EGVFDGAIRLFRGMV 360
           I  +N+L+ MY+K G LD A+R+F++M ER+VV+WT+++A  A  +G  + A+R    M 
Sbjct: 115 IFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMW 174

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           R+G+ P+ Y  +S+L AC   G+L     +H    +  + S ++V ++L+D Y K G + 
Sbjct: 175 RDGVAPNAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDVFVRSSLIDAYMKLGDLD 231

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACA 469
               VF++M  +D+V WN++I          GA++LF+ M    F  +  T+  +L AC 
Sbjct: 232 GGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACT 291

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            +  LE GR++H ++L++    D  + NA++DMY KCG L  A +LF  +P +D+ISW+ 
Sbjct: 292 GMVMLEAGRQVHAHVLKY--ERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWST 349

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           MI+G   +G   +A+  F+ M+  G+ P+ ++ + VL+ACSH+GLV++GW +F  M+   
Sbjct: 350 MISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLF 409

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            I+P+ EH+ CMVDLL R G L EA  FI  M + PDA IW +LL  CR+H    LA   
Sbjct: 410 GIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYA 469

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           A  + +LEPD+ G  VLL+N YA+  +W + +K  + +  RG+KK PG SWIE++  V++
Sbjct: 470 AREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHV 529

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F+AG  SHP +  I   L RL   +   GY P+T + L +    +KE  L  HSEK+A+A
Sbjct: 530 FIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIA 589

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           FG ++   G+ IR+ KNLR+CGDCH  AK +SK+  R I++RD  RFHHF+DG CSC  +
Sbjct: 590 FGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDY 649

Query: 830 W 830
           W
Sbjct: 650 W 650



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 185/361 (51%), Gaps = 29/361 (8%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYI-ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           + DA +LFD + +R+VV+W  +++    A+G  E+ L     M   G   +  T  +VL 
Sbjct: 131 LDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLG 190

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C   G L    A+HA  +K     ++   ++L+D Y K GDLDG  RVF++M  R +V 
Sbjct: 191 ACGTPGVLA---ALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVV 247

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W S+IAG+A+ G   GAI LF  M   G   +   +TS+L AC    +LE G+ VH ++ 
Sbjct: 248 WNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVL 307

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           +   +  L + NAL+DMY KCGS+ DAE++F++MP +D++SW+TMI           AL 
Sbjct: 308 K--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALR 365

Query: 446 LFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRH-----GISADRNVANAI 499
           +F  M  +   P+ +TM  +L AC+    +E G     Y  R      GI  +R   N +
Sbjct: 366 VFDLMKSEGVAPNRITMVGVLFACSHAGLVEDG----WYYFRSMKKLFGIQPEREHHNCM 421

Query: 500 VDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           VD+  + G L  A     DM    D + W  ++    MH  G   +A +       +EPD
Sbjct: 422 VDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSG--NLAAYAAREILKLEPD 479

Query: 559 E 559
           +
Sbjct: 480 D 480



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 215/478 (44%), Gaps = 68/478 (14%)

Query: 7   KITTNFLFFSPPNQSYGKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNY 66
           ++    LF  PP      + A+ + S+ P+      H S  I                  
Sbjct: 6   RVLMKSLFKRPPRN----RLAATRRSSRPVHTQPPPHPSLAI------------------ 43

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
                R C  G    A+ +L     +  + D  +   +++LC    +  DG+ +H  +  
Sbjct: 44  ---FSRLCVEGPFPAALALLPDLAAAGLRADPVSLTRLVKLCVRHGTAGDGRLIHRHVEA 100

Query: 125 SGIV------IDDGVLGSK-LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT- 176
            G +         G+  S  LV M+   G L +  R+F+++    V  W  ++   +   
Sbjct: 101 HGQLSHYSGGAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANAD 160

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG-----NSRRVK------------- 218
           G  +E+L     M   G+A ++YTFS VL      G     ++  VK             
Sbjct: 161 GRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGVLAALHASTVKVGLDSDVFVRSSL 220

Query: 219 -DAH----------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
            DA+          ++FDE+  RD+V WN +I+G+  +G     +E+F  M + GF+ + 
Sbjct: 221 IDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQ 280

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T+ +VL  C     L  GR VHA  LK  + +++  +N LLDMY KCG L+ A  +F +
Sbjct: 281 GTLTSVLRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHR 338

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M +R V+SW++MI+G A+ G    A+R+F  M  EG+ P+   +  +L AC+  GL+E G
Sbjct: 339 MPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDG 398

Query: 388 KDVHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
                 +K+   +Q      N ++D+  + G + +A      M ++ D V W T++GA
Sbjct: 399 WYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGA 456


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/548 (39%), Positives = 340/548 (62%), Gaps = 12/548 (2%)

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           ++ CA    L   R +HA    + F+ +   +N+L+ +Y KCG +  A +VF+KM  + +
Sbjct: 58  ITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDM 117

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSWTS+IAGYA+  +   AI L  GM++   +P+ +   S+L A        IG  +H  
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHAL 177

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
             + D    +YV +AL+DMYA+CG M  A +VF+++  K+ VSWN +I           A
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 444 LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           L +F  M +N FE    T + I  A A + ALE+G+ +H ++++        V N ++DM
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDM 297

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y K G ++ AR +F+ +  KDL++W  M+  +  +G G +A++ F +MR++GI  +++SF
Sbjct: 298 YAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISF 357

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           + +L ACSH GLV EG  +F+M++ E N+EP++EHY  +VDLL R G L+ A  FI  MP
Sbjct: 358 LCILTACSHGGLVKEGKHYFDMIK-EYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMP 416

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + P A +WG+LL  CR+H   K+ +  A+HVF+L+PD++G  VLL N+YA    W+   +
Sbjct: 417 MEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAAR 476

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R+ +   G+KK P CSW+EI+  V++FVA   +HP A++I  +   + +++++EGY P 
Sbjct: 477 VRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPD 536

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
             Y L++ DE E+E  L  HSEK+A+AF ++ +PAG TIR+ KN+R+CGDCH   K++SK
Sbjct: 537 MDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISK 596

Query: 803 TARREIVL 810
              REIV+
Sbjct: 597 VFEREIVI 604



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 223/449 (49%), Gaps = 22/449 (4%)

Query: 155 FNKIDNGKVFIWNLLMHEY----SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
            + +D+G++     + H +    +++ N  ++  +   + S   A D++  + ++     
Sbjct: 39  LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCK 98

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
            G+   V +AHK+FD++ ++D+VSW  +I+GY  N +  + + +   ML   F  +  T 
Sbjct: 99  CGS---VVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTF 155

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++L           G  +HA A+K  + +++   + LLDMY++CG +D A  VF+K+  
Sbjct: 156 ASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDS 215

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           ++ VSW ++I+G+AR+G  + A+ +F  M R G E   +  +SI  A A  G LE GK V
Sbjct: 216 KNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWV 275

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLF--- 447
           H ++ ++  + + +V N ++DMYAK GSM DA  VF ++  KD+V+WN+M+ A   +   
Sbjct: 276 HAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLG 335

Query: 448 ---VAMLQNFEPDG-----VTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
              V+  +     G     ++  CIL AC+    ++ G+     I  + +  +      +
Sbjct: 336 KEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTV 395

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           VD+  + G+L  A      +P +   + W  ++A   MH      +  F       ++PD
Sbjct: 396 VDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNA--KVGQFAADHVFQLDPD 453

Query: 559 EVSFISVLYAC-SHSGLVDEGWRFFNMMR 586
           +     +LY   + +G  D   R   MM+
Sbjct: 454 DSGPPVLLYNIYASTGHWDAAARVRKMMK 482



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 178/380 (46%), Gaps = 34/380 (8%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + Y + +  CA  K+L+D +K+H+ +  S     D  L + L+ ++  CG + E  +VF+
Sbjct: 52  RVYHAFITACAQSKNLDDARKIHAHLASSRFA-GDAFLDNSLIHLYCKCGSVVEAHKVFD 110

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
           K+ N  +  W  L+  Y++     E++ L   M       + +TF+ +LK +    +S  
Sbjct: 111 KMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGI 170

Query: 217 VKDAHKL--------------------------------FDELSDRDVVSWNCMISGYIA 244
               H L                                FD+L  ++ VSWN +ISG+  
Sbjct: 171 GGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFAR 230

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G  E  L VF EM   GF     T  ++ S  A  GAL  G+ VHA  +K+        
Sbjct: 231 KGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFV 290

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            NT+LDMY+K G +  A +VFE++  + +V+W SM+  +A+ G+   A+  F  M + GI
Sbjct: 291 GNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGI 350

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
             +  +   IL AC+  GL++ GK   D IKE +++  +     ++D+  + G +  A  
Sbjct: 351 YLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALV 410

Query: 425 VFNQMPVKDIVS-WNTMIGA 443
              +MP++   + W  ++ A
Sbjct: 411 FIFKMPMEPTAAVWGALLAA 430


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/584 (38%), Positives = 347/584 (59%), Gaps = 26/584 (4%)

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAF-----ALKACFSKEISFNNTLLDMYSKCGDLDG 320
           D  ++  ++  C   G    GR +H        L    +  +  +N+L  MY+K G LD 
Sbjct: 63  DPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDD 122

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
           A+R+F+ M  R+VV+WT+++A  A  +G    A+R    M R+G+ P+ Y  +S+L AC 
Sbjct: 123 ALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACT 182

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
             G+L     VH    +  + S ++V ++L+D Y K G +     VF++M  +D+V WN+
Sbjct: 183 TPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNS 239

Query: 440 MI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           +I          GA++LF+ M    F  +  T+  +L AC  +  LE GR++H ++L++ 
Sbjct: 240 IIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKY- 298

Query: 489 ISADRNVA--NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
              DR++   NA++DMY KCG L  A +LF  +P +D+ISW+ M++G   +G   +A+  
Sbjct: 299 ---DRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRV 355

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
           F+ M+  G+ P+ V+ + VL+ACSH+GLV++GW +F  M+    I+P+ EH+ CMVDLL 
Sbjct: 356 FDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLG 415

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVL 666
           R G L EA  FI  M + PD+ IW +LL  CR+H    LA   A  + +LEPD+ G  VL
Sbjct: 416 RAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVL 475

Query: 667 LANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESL 726
           L+N YA+  +W + +K  + +  RG++K PG SWIE++ +V++F+AG  SHP +  I   
Sbjct: 476 LSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQE 535

Query: 727 LKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKN 786
           L RL   +K  GY P+T + L +    +KE  L  HSEK+A+ FG ++   G+ IR+ KN
Sbjct: 536 LNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKN 595

Query: 787 LRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LR+CGDCH  AK +SK+  R IV+RD  RFHHF+DG CSC  +W
Sbjct: 596 LRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 190/387 (49%), Gaps = 38/387 (9%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLG----SKLVFMFVTCGDL 148
           + D  +   +++LC    + + G+ +H  +   G +  DG  G    + L  M+   G L
Sbjct: 61  RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEY-SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
            +  R+F+ +    V  W  ++    S  G  +E+L     M+  G+A ++YTFS VL  
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180

Query: 208 LAVVG-----NSRRVK--------------DAH----------KLFDELSDRDVVSWNCM 238
               G     ++  VK              DA+          ++FDE+  RD+V WN +
Sbjct: 181 CTTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSI 240

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I+G+  +G     +E+F  M + GF+ +  T+ +VL  C     L  GR VHA  LK  +
Sbjct: 241 IAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--Y 298

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
            +++  +N LLDMY KCG L+ A  +F +M +R V+SW++M++G A+ G    A+R+F  
Sbjct: 299 DRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDL 358

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCG 417
           M  +G+ P+   +  +L AC+  GL+E G      +K    +Q      N ++D+  + G
Sbjct: 359 MKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAG 418

Query: 418 SMADAESVFNQMPVK-DIVSWNTMIGA 443
            + +A    + M ++ D V W T++GA
Sbjct: 419 KLDEAVEFIHGMSLEPDSVIWRTLLGA 445


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/707 (35%), Positives = 387/707 (54%), Gaps = 35/707 (4%)

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           L+EG+ V       +  ++  L+H   +TG+   +  L   M   G +AD +  + ++  
Sbjct: 70  LREGKTV-------QSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNA 122

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
               G S   +DA  LFD++ +++VV+W  +I+GY  N    + LEVF EML  G     
Sbjct: 123 YMRCGAS---QDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSH 179

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T+  +L+ C+       G  VH + +K       S  N+L  MY+K G L+ A+R F  
Sbjct: 180 YTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRM 239

Query: 328 MGERSVVSWTSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
           + +++V++WT+MI+  A  E   +  + LF  M+ +G+ P+ + +TS++  C     L +
Sbjct: 240 VPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNL 299

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
           GK V  +  +   Q+++ V N+ M +Y + G   +A   F +M    I++WN MI     
Sbjct: 300 GKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQ 359

Query: 443 -----------------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYI 484
                            AL +F  + ++  +PD  T + IL  C+S+ ALE+G +IH   
Sbjct: 360 IMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQT 419

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
           ++ G  +D  V +A+V+MY KCG +  A   F  +  + L++WT MI+GY  HG   +AI
Sbjct: 420 IKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAI 479

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
             F DMR AG+ P+E++F+ VL ACS++GL ++   +F+MM+ E  IEP ++HY CMVD+
Sbjct: 480 QLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDM 539

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
             R G L +A+ FI      P+  IW SL+ GCR H  ++LA   A+ + EL P     Y
Sbjct: 540 FVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETY 599

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
           VLL N+Y   E+W +V ++R+ + + GL      SWI IK KV  F A   +H  + ++ 
Sbjct: 600 VLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELY 659

Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEMEKEVA--LCGHSEKLAMAFGILNLPAGQTIR 782
            LL+ L  + K  GY P     L ++++ +K  A  +  HSE+LA+A G+L  P G T+R
Sbjct: 660 QLLENLLEKAKTIGYEPYQSAELSDSEDDKKPPAGSVRHHSERLAVALGLLQTPPGATVR 719

Query: 783 VTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           VTKN+ +C DCH   KF S  A REIV+RDS R H FKDGRCSC  F
Sbjct: 720 VTKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 199/418 (47%), Gaps = 27/418 (6%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           ML  G  V  A  V +L  C   G+L   RA+H   +K   S ++    +L++ Y +CG 
Sbjct: 69  MLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGA 128

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
              A  +F++M E++VV+WT++I GY        A+ +F  M+  G  P  Y + ++L+A
Sbjct: 129 SQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNA 188

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           C+     ++G  VH Y  +    S   + N+L  MYAK GS+  A   F  +P K++++W
Sbjct: 189 CSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITW 248

Query: 438 NTMIGA-----------LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYIL 485
            TMI A           L LF+ ML +   P+  T+  ++  C +   L  G+++  +  
Sbjct: 249 TTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCF 308

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM--------- 536
           + G   +  V N+ + +Y++ G    A   F+ +    +I+W  MI+GY           
Sbjct: 309 KIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDL 368

Query: 537 --HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
                G  A+  F +++++ ++PD  +F S+L  CS    +++G +  +    +      
Sbjct: 369 HARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQ-IHAQTIKTGFLSD 427

Query: 595 LEHYACMVDLLSRTGNLSEAYR-FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
           +   + +V++ ++ G + +A + F+EM         W S++ G   H   + A ++ E
Sbjct: 428 VVVNSALVNMYNKCGCIEDATKAFVEM--SIRTLVTWTSMISGYSQHGRPQEAIQLFE 483



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 19/241 (7%)

Query: 81  KAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           +A++V  + ++S  K D  T+ SIL +C+ + +LE G+++H+   ++G  + D V+ S L
Sbjct: 376 QALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGF-LSDVVVNSAL 434

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS 198
           V M+  CG +++  + F ++    +  W  ++  YS+ G  +E++ LF+ M+  G+  + 
Sbjct: 435 VNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNE 494

Query: 199 YTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLE 253
            TF CVL   +  G + +   A   FD + +   +      + CM+  ++  G  +   +
Sbjct: 495 ITFVCVLSACSYAGLAEK---AEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLD---D 548

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCG--ALMFGRAVHAFALKACFSKEISFNNTLLDM 311
            F  +   GF  + A   ++++GC + G   L F  A     L+    K I     LL+M
Sbjct: 549 AFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRP---KGIETYVLLLNM 605

Query: 312 Y 312
           Y
Sbjct: 606 Y 606


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/574 (40%), Positives = 341/574 (59%), Gaps = 12/574 (2%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T  ++LS  A    ++ G+ +H+   K  F   I     L+DMY+KC D+  A+RVF++M
Sbjct: 12  TFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQM 71

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIG 387
            ER++VSW SMI G+    ++D A+ +F+ ++RE  + P+  +++S+L ACA  G L  G
Sbjct: 72  PERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFG 131

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
           + VH  + +  +    YV N+LMDMY KC    +   +F  +  +D+V+WN ++      
Sbjct: 132 RQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQN 191

Query: 442 ----GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                A + F  M  +   PD  + + +L + ASLAAL +G  IH  I++ G   +  + 
Sbjct: 192 DKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCIL 251

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
            +++ MY KCG LV A  +F+ I   ++ISWT MI+ Y +HG     I  F  M   GIE
Sbjct: 252 GSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIE 311

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           P  V+F+ VL ACSH+G V+EG   FN M+   ++ P  EHYACMVDLL R G L EA R
Sbjct: 312 PSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKR 371

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
           FIE MP+ P  ++WG+LL  CR +  +K+  + AE +FE+EP N G YVLLAN+   + +
Sbjct: 372 FIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGR 431

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
            EE  ++R  +   G++K PGCSWI++K    +F A   SH  + +I  +L++L   +K+
Sbjct: 432 LEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKK 491

Query: 737 EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
           +GY  +T +   + +E E+E  L  HSEKLA+AFG+L LP    IR+ KNLR CG CH +
Sbjct: 492 KGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTV 551

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            K  SK   REI++RD NRFH F DG CSC  +W
Sbjct: 552 MKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 199/391 (50%), Gaps = 26/391 (6%)

Query: 209 AVVGNSRRVKDAH---KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           A+V    +  D H   ++FD++ +R++VSWN MI G+  N + ++ + VFK++L     +
Sbjct: 50  ALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVI 109

Query: 266 -DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            +  ++ +VLS CAN G L FGR VH   +K          N+L+DMY KC   D  +++
Sbjct: 110 PNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKL 169

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F+ +G+R VV+W  ++ G+ +   F+ A   F  M REGI PD  + +++LH+ A    L
Sbjct: 170 FQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAAL 229

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA- 443
             G  +HD I +     ++ +  +L+ MYAKCGS+ DA  VF  +   +++SW  MI A 
Sbjct: 230 HQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAY 289

Query: 444 ---------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISAD 492
                    ++LF  ML +  EP  VT  C+L AC+    +E G      + + H ++  
Sbjct: 290 QLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPG 349

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAG---YGMHGFGCDAIATFN 548
                 +VD+  + G L  A+   + +P K   S W  ++     YG    G +A     
Sbjct: 350 PEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLF 409

Query: 549 DMRQAGIEP-DEVSFISVLYACSHSGLVDEG 578
           +M     EP +  +++ +   C+ SG ++E 
Sbjct: 410 EM-----EPYNPGNYVLLANMCTRSGRLEEA 435



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 178/382 (46%), Gaps = 38/382 (9%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFN 156
           T+ SIL   A    +  G+++HS+I + G   D  + +G+ LV M+  C D+    RVF+
Sbjct: 12  TFSSILSASAATMMVLHGQQLHSLIHKHGF--DANIFVGTALVDMYAKCADMHSAVRVFD 69

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK-MQSLGIAADSYTFSCVLKCLAVVGNSR 215
           ++    +  WN ++  +     +  ++ +FK  ++   +  +  + S VL   A +G   
Sbjct: 70  QMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLN 129

Query: 216 RVKDAH--------------------------------KLFDELSDRDVVSWNCMISGYI 243
             +  H                                KLF  + DRDVV+WN ++ G++
Sbjct: 130 FGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFV 189

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            N   E+    F  M   G   D A+  TVL   A+  AL  G A+H   +K  + K + 
Sbjct: 190 QNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMC 249

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
              +L+ MY+KCG L  A +VFE + + +V+SWT+MI+ Y   G  +  I LF  M+ EG
Sbjct: 250 ILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEG 309

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADA 422
           IEP       +L AC+  G +E G    + +K+ +DM         ++D+  + G + +A
Sbjct: 310 IEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEA 369

Query: 423 ESVFNQMPVKDIVS-WNTMIGA 443
           +     MP+K   S W  ++GA
Sbjct: 370 KRFIESMPMKPTPSVWGALLGA 391



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 169/320 (52%), Gaps = 16/320 (5%)

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G  P+ +  +SIL A A   ++  G+ +H  I ++   ++++V  AL+DMYAKC  M  A
Sbjct: 5   GPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSA 64

Query: 423 ESVFNQMPVKDIVSWNTMI----------GALDLFVAML--QNFEPDGVTMACILPACAS 470
             VF+QMP +++VSWN+MI           A+ +F  +L  +   P+ V+++ +L ACA+
Sbjct: 65  VRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACAN 124

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           +  L  GR++HG +++ G+     V N+++DMY KC        LF  +  +D+++W ++
Sbjct: 125 MGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVL 184

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           + G+  +    +A   F  MR+ GI PDE SF +VL++ +    + +G    + +  +  
Sbjct: 185 VMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQI-IKLG 243

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
               +     ++ + ++ G+L +AY+  E +    +   W +++   ++H       ++ 
Sbjct: 244 YVKNMCILGSLITMYAKCGSLVDAYQVFEGIE-DHNVISWTAMISAYQLHGCANQVIELF 302

Query: 651 EHVFE--LEPDNTGYYVLLA 668
           EH+    +EP +  +  +L+
Sbjct: 303 EHMLSEGIEPSHVTFVCVLS 322



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 159/351 (45%), Gaps = 47/351 (13%)

Query: 90  EKSKIDTK-TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           EK+ I  + +  S+L  CA++  L  G++VH ++ + G+V    V+ S L+ M+  C   
Sbjct: 105 EKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNS-LMDMYFKCRFF 163

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL--- 205
            EG ++F  + +  V  WN+L+  + +   F+E+   F  M+  GI  D  +FS VL   
Sbjct: 164 DEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSS 223

Query: 206 ----------------------KCLAVVGN-------SRRVKDAHKLFDELSDRDVVSWN 236
                                 K + ++G+          + DA+++F+ + D +V+SW 
Sbjct: 224 ASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWT 283

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MIS Y  +G A + +E+F+ ML+ G      T V VLS C++ G +  G A H  ++K 
Sbjct: 284 AMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLA-HFNSMKK 342

Query: 297 CFSKEISFNN--TLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAGYAREGVF---- 349
                    +   ++D+  + G LD A R  E M  +   S W +++    + G      
Sbjct: 343 IHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGR 402

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
           + A RLF     E   P  Y +  + + C   G LE   +V   +  N ++
Sbjct: 403 EAAERLFE---MEPYNPGNYVL--LANMCTRSGRLEEANEVRRLMGVNGVR 448



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 6/165 (3%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N  +  F +    E+A    +   +  I  D  ++ ++L   A L +L  G  +H  I
Sbjct: 180 TWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQI 239

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G V +  +LGS L+ M+  CG L +  +VF  I++  V  W  ++  Y   G   + 
Sbjct: 240 IKLGYVKNMCILGS-LITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQV 298

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL 227
           + LF+ M S GI     TF CVL   +  G   RV++    F+ +
Sbjct: 299 IELFEHMLSEGIEPSHVTFVCVLSACSHTG---RVEEGLAHFNSM 340


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/763 (32%), Positives = 385/763 (50%), Gaps = 44/763 (5%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           LE G  VH+      +   + +  + ++   +  G L + R +F+ +       W +L+ 
Sbjct: 54  LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH---------- 221
            Y ++   KE+  L+  M+  GI  D  T   +L     +     +   H          
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173

Query: 222 ----------------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
                                 +LF  + ++D V++N +++GY   G+ E+ +E+F E+ 
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
           N G      T   +LS         FG+ VH F LK  F   +   N LLD YSK   +D
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
              ++F +M E   +S+  +I  YA  G F  +  LFR +     +   +   ++L    
Sbjct: 294 EVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIAT 353

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               L +G+ +H             V NAL+DMYAKC    +A+ +F+ +  K  V W  
Sbjct: 354 SSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTA 413

Query: 440 MIGA----------LDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHG 488
           MI A          +++F  M +   P D  T A IL ACA+LA++  GR++H  ++R G
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSG 473

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
             ++    +A++D Y KCG +  A   F  +P ++ +SW  +I+ Y  +G     + +F 
Sbjct: 474 FMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQ 533

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            M Q+G +PD VSF+SVL ACSH G V+E    FN M     + PK EHY  MVD+L R 
Sbjct: 534 QMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRN 593

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP-DNTGYYVLL 667
           G   EA + +  MP  P   +W S+L  CRIH   +LA+K A+ +F +E   +   Y+ +
Sbjct: 594 GRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINM 653

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLL 727
           +N+YA A +W+ V K+++ +  RG++K P  SW+EIK + ++F A   SHP  KKI   +
Sbjct: 654 SNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKI 713

Query: 728 KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNL 787
             L  EM+++GY P T  AL + DE+ K  +L  HSE+ A+AF ++N P G  I V KNL
Sbjct: 714 NALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNL 773

Query: 788 RVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           R C DCH   K +S+   REI++RDS+RFHHFKDG CSC  +W
Sbjct: 774 RACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 135/539 (25%), Positives = 240/539 (44%), Gaps = 56/539 (10%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGK---KVHSIICESG 126
           IG + +    ++A  +     +  I+   Y +++ L +    LE      ++H+ + + G
Sbjct: 112 IGGYLQSNQSKEAFRLYADMRRGGIEPD-YVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
              +  V  S LV  +     L    ++F  + N     +N LM  YS  G  +E++ LF
Sbjct: 171 YEYNLMVCNS-LVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229

Query: 187 KKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS-------- 214
            ++ + GI    +TF+ +L                             VGN+        
Sbjct: 230 LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH 289

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
            +V +  KLF E+ + D +S+N +I+ Y  NG  ++  ++F+++    F+       T+L
Sbjct: 290 DQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLL 349

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S   +   L  GR +H  A+    + E    N L+DMY+KC     A ++F+ +  +S V
Sbjct: 350 SIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTV 409

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
            WT+MI+ Y ++G  +  I +F  M R G+  D     SIL ACA    + +G+ +H  +
Sbjct: 410 PWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLL 469

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GAL 444
             +   S++Y  +AL+D YAKCG M DA   F +MP ++ VSWN +I          G L
Sbjct: 470 IRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTL 529

Query: 445 DLFVAMLQN-FEPDGVTMACILPACASLAALERGR-EIHGYILRHGISADRNVANAIVDM 502
           + F  M+Q+ ++PD V+   +L AC+    +E      +     + ++  R    ++VD+
Sbjct: 530 NSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDV 589

Query: 503 YVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGF------GCDAIATFNDMRQAG 554
             + G    A  L   +P     I W+ ++    +H          D +    D+R A 
Sbjct: 590 LCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAA 648



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 12/200 (6%)

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVS-NALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
           +  LE G  VH +   + M +   +S N ++  + K G ++ A  +F+ M  +  VSW  
Sbjct: 51  NNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTI 110

Query: 440 MIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           +IG          A  L+  M +   EPD VT+  +L     L       +IH ++++ G
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
              +  V N++VD Y K   L LA  LF  +  KD +++  ++ GY   G   +AI  F 
Sbjct: 171 YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFL 230

Query: 549 DMRQAGIEPDEVSFISVLYA 568
           ++  +GI+P + +F ++L A
Sbjct: 231 ELHNSGIKPSDFTFAALLSA 250



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 31/129 (24%)

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI--- 525
           A   +L     I  +I++ G + +   +N  V+ +++ G LV A  +FD +PAK+ I   
Sbjct: 19  APKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLN 78

Query: 526 ----------------------------SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
                                       SWTI+I GY       +A   + DMR+ GIEP
Sbjct: 79  MMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEP 138

Query: 558 DEVSFISVL 566
           D V+ +++L
Sbjct: 139 DYVTLVTLL 147


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/580 (40%), Positives = 356/580 (61%), Gaps = 25/580 (4%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L+ C+    L  G+ VH    K  F       N+++DMYSKCG +  A RVF  +  R+
Sbjct: 10  ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRN 69

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           V+SW +MIAGY  E   + A+ LFR M  +G  PD Y  +S L AC+C      G  +H 
Sbjct: 70  VISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHA 129

Query: 393 YIKENDM----QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------- 441
            +  +      QS+  V+ AL+D+Y KC  MA+A  VF+++  K ++SW+T+I       
Sbjct: 130 ALIRHGFPYLAQSA--VAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQED 187

Query: 442 ---GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR--HGISADRNV 495
               A+DLF  + ++    DG  ++ I+   A  A LE+G+++H Y ++  +G+  + +V
Sbjct: 188 NLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGL-LEMSV 246

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
           AN+++DMY+KCG+ V A +LF  +  ++++SWT+MI GYG HG G  A+  FN+M++ GI
Sbjct: 247 ANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGI 306

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           EPD V++++VL ACSHSGL+ EG ++F+++     I+PK+EHYACMVDLL R G L EA 
Sbjct: 307 EPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAK 366

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
             IE MP+ P+  IW +LL  CR+H +V++ ++V E +   E +N   YV+++N+YA A 
Sbjct: 367 NLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAG 426

Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
            W+E +K+RE + R+GLKK  G SW+E+  +++IF  G   HP  ++I  +LK +   +K
Sbjct: 427 YWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVK 486

Query: 736 RE-GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI----LNLPAGQTIRVTKNLRVC 790
            E GY     ++L + +E  K  +L  HSEKLA+   +    L L   + IR+ KNLRVC
Sbjct: 487 EEMGYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRVC 546

Query: 791 GDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           GDCH   K +SK  +   V+RD+NRFH F++G CSC  +W
Sbjct: 547 GDCHAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 196/384 (51%), Gaps = 38/384 (9%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           +++    IL  C+  + L+ GK+VH ++ + G  +   V+G+ ++ M+  CG + E  RV
Sbjct: 3   ESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIX-VVGNSMIDMYSKCGMVGEAARV 61

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---CLAVV 211
           FN +    V  WN ++  Y+   N +E+L LF++M+  G   D YT+S  LK   C    
Sbjct: 62  FNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAA 121

Query: 212 GNS-------------------------------RRVKDAHKLFDELSDRDVVSWNCMIS 240
           G                                 RR+ +A K+FD + ++ V+SW+ +I 
Sbjct: 122 GEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLIL 181

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS- 299
           GY      ++ +++F+E+      +D   + +++   A+   L  G+ +HA+ +K  +  
Sbjct: 182 GYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGL 241

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            E+S  N++LDMY KCG    A  +F +M ER+VVSWT MI GY + G+ + A+ LF  M
Sbjct: 242 LEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEM 301

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND-MQSSLYVSNALMDMYAKCGS 418
              GIEPD     ++L AC+  GL++ GK     +  N  ++  +     ++D+  + G 
Sbjct: 302 QENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGR 361

Query: 419 MADAESVFNQMPVKDIVS-WNTMI 441
           + +A+++  +MP+K  V  W T++
Sbjct: 362 LKEAKNLIEKMPLKPNVGIWQTLL 385



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 198/397 (49%), Gaps = 31/397 (7%)

Query: 208 LAVVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
           + VVGNS          V +A ++F+ L  R+V+SWN MI+GY      E+ L +F+EM 
Sbjct: 38  IXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMR 97

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS--KEISFNNTLLDMYSKCGD 317
             G   D  T  + L  C+   A   G  +HA  ++  F    + +    L+D+Y KC  
Sbjct: 98  EKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRR 157

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           +  A +VF+++ E+SV+SW+++I GYA+E     A+ LFR +       D + ++SI+  
Sbjct: 158 MAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGV 217

Query: 378 CACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
            A   LLE GK +H Y IK       + V+N+++DMY KCG   +A+++F +M  +++VS
Sbjct: 218 FADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVS 277

Query: 437 WNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYIL 485
           W  MI           A++LF  M +N  EPD VT   +L AC+    ++ G++    + 
Sbjct: 278 WTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILC 337

Query: 486 -RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG---FG 540
               I         +VD+  + G L  A++L + +P K  +  W  +++   MHG    G
Sbjct: 338 SNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMG 397

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
                    +R+ G  P     +S +YA  H+G   E
Sbjct: 398 KQVGEIL--LRREGNNPANYVMVSNMYA--HAGYWKE 430



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 159/318 (50%), Gaps = 26/318 (8%)

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           +  IL+ C+   LL+ GK VH  +++        V N+++DMY+KCG + +A  VFN +P
Sbjct: 7   LNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLP 66

Query: 431 VKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGRE 479
           V++++SWN MI           AL+LF  M +  E PDG T +  L AC+   A   G +
Sbjct: 67  VRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQ 126

Query: 480 IHGYILRHGIS--ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           IH  ++RHG    A   VA A+VD+YVKC  +  AR +FD I  K ++SW+ +I GY   
Sbjct: 127 IHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQE 186

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
               +A+  F ++R++    D     S++   +   L+++G +   M  Y   +   L  
Sbjct: 187 DNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQ---MHAYTIKVPYGLLE 243

Query: 598 YAC---MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH----HEVKLAEKVA 650
            +    ++D+  + G   EA      M +  +   W  ++ G   H      V+L  ++ 
Sbjct: 244 MSVANSVLDMYMKCGLTVEADALFREM-LERNVVSWTVMITGYGKHGIGNKAVELFNEMQ 302

Query: 651 EHVFELEPDNTGYYVLLA 668
           E+   +EPD+  Y  +L+
Sbjct: 303 EN--GIEPDSVTYLAVLS 318



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/451 (22%), Positives = 187/451 (41%), Gaps = 84/451 (18%)

Query: 43  HSSCTINPISASISKTL-VCKTKNYNAEIGRFCEVGNLEKAMEVLYS-SEKSKI-DTKTY 99
           +S C +   +A +  TL V    ++NA I  +    N E+A+ +     EK ++ D  TY
Sbjct: 49  YSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTY 108

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGI-VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
            S L+ C+   +  +G ++H+ +   G   +    +   LV ++V C  + E R+VF++I
Sbjct: 109 SSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRI 168

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
           +   V  W+ L+  Y++  N KE++ LF++++      D +  S ++   A      + K
Sbjct: 169 EEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGK 228

Query: 219 DAH---------------------------------KLFDELSDRDVVSWNCMISGYIAN 245
             H                                  LF E+ +R+VVSW  MI+GY  +
Sbjct: 229 QMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKH 288

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA-FALKACFSKEISF 304
           G+  K +E+F EM   G   D  T + VLS C++ G +  G+   +          ++  
Sbjct: 289 GIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEH 348

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
              ++D+  + G L  A  + EKM                                   +
Sbjct: 349 YACMVDLLGRGGRLKEAKNLIEKM----------------------------------PL 374

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYI---KENDMQSSLYVSNALMDMYAKCGSMAD 421
           +P+V    ++L  C   G +E+GK V + +   + N+  + + VSN    MYA  G   +
Sbjct: 375 KPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSN----MYAHAGYWKE 430

Query: 422 AESVFNQMPVKDIV-----SWNTMIGALDLF 447
           +E +   +  K +      SW  M   + +F
Sbjct: 431 SEKIRETLKRKGLKKEAGRSWVEMDKEIHIF 461


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/753 (34%), Positives = 396/753 (52%), Gaps = 123/753 (16%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL----- 208
           +FN   N  VF++  ++  YS   +  + + +F+ MQ  G+  D++ +  ++K       
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGI 115

Query: 209 -------------------AVVGNSRR---VKDAHKLFDELSD--RDVVSWNCMISGYI- 243
                              AV+    R   +  A K+FDE+ D  R V  WN M+SGY  
Sbjct: 116 GFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWK 175

Query: 244 --ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
             + G A+   +V  E        ++ T   +++G                         
Sbjct: 176 WESEGQAQWLFDVMPER-------NVITWTAMVTG------------------------- 203

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
                     Y+K  DL+ A R F+ M ERSVVSW +M++GYA+ G+ +  +RLF  MV 
Sbjct: 204 ----------YAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVN 253

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA- 420
            GIEPD     +++ AC+  G   +   +   + +  +Q + +V  AL+DMYAKCGS+  
Sbjct: 254 AGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGA 313

Query: 421 -------------------------------DAESVFNQMPVKDIVSWNTMIG------- 442
                                           A  +FN MP +++V+WN+MI        
Sbjct: 314 ARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQ 373

Query: 443 ---ALDLFVAML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
              A++LF  M+  +   PD VTM  ++ AC  L ALE G  +  ++  + I    +  N
Sbjct: 374 SAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHN 433

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           A++ MY +CG +  A+ +F  +  +D++S+  +I+G+  HG G +AI   + M++ GIEP
Sbjct: 434 AMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEP 493

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           D V+FI VL ACSH+GL++EG + F  ++     +P ++HYACMVDLL R G L +A R 
Sbjct: 494 DRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRT 548

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           +E MP+ P A ++GSLL   RIH +V+L E  A  +FELEPDN+G ++LL+N+YA A +W
Sbjct: 549 MERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRW 608

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
           ++V+++RE + + G+KK  G SW+E  GK++ F+    SH  +  I  LL  LR +M+  
Sbjct: 609 KDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREA 668

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           GY       L + +E EKE  +  HSEKLA+ + +L   AG  IRV KNLRVC DCH   
Sbjct: 669 GYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAI 728

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K +SK   R I++RD+NRFH F DG CSC+ +W
Sbjct: 729 KMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 167/362 (46%), Gaps = 69/362 (19%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           + +V  +    DL+  RR F+ +    V  WN ++  Y++ G  +E L LF +M + GI 
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIE 257

Query: 196 ADSYTFSCVLK--------CLAV------------------------------VGNSRRV 217
            D  T+  V+         CLA                               +G +RR+
Sbjct: 258 PDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRI 317

Query: 218 KD--------------------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
            D                          A +LF+ +  R+VV+WN MI+GY  NG +   
Sbjct: 318 FDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMA 377

Query: 252 LEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
           +E+FKEM+       D  TMV+V+S C + GAL  G  V  F  +      IS +N ++ 
Sbjct: 378 IELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIF 437

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MYS+CG ++ A RVF++M  R VVS+ ++I+G+A  G    AI L   M   GIEPD   
Sbjct: 438 MYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVT 497

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
              +L AC+  GLLE G+ V + IK+  +         ++D+  + G + DA+    +MP
Sbjct: 498 FIGVLTACSHAGLLEEGRKVFESIKDPAIDHYA----CMVDLLGRVGELEDAKRTMERMP 553

Query: 431 VK 432
           ++
Sbjct: 554 ME 555



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 37/231 (16%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM- 189
           + V  + ++  +   G+L   R +FN +    V  WN ++  Y++ G    ++ LFK+M 
Sbjct: 326 NSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMI 385

Query: 190 QSLGIAADSYTFSCVLKC-----------------------LAVVGNSRRV--------- 217
            +  +  D  T   V+                         L++ G++  +         
Sbjct: 386 TAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSM 445

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           +DA ++F E++ RDVVS+N +ISG+ A+G   + + +   M   G   D  T + VL+ C
Sbjct: 446 EDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTAC 505

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           ++ G L  GR V     ++     I     ++D+  + G+L+ A R  E+M
Sbjct: 506 SHAGLLEEGRKV----FESIKDPAIDHYACMVDLLGRVGELEDAKRTMERM 552



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 9/179 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            +N+ I  + + G    A+E+   + +++K   D  T  S++  C  L +LE G  V   
Sbjct: 360 TWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRF 419

Query: 122 ICESGIVIDDGVLG-SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           + E+ I +   + G + ++FM+  CG +++ +RVF ++    V  +N L+  ++  G+  
Sbjct: 420 LTENQIKLS--ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGV 477

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMI 239
           E++ L   M+  GI  D  TF  VL   +  G    +++  K+F+ + D  +  + CM+
Sbjct: 478 EAINLMSTMKEGGIEPDRVTFIGVLTACSHAG---LLEEGRKVFESIKDPAIDHYACMV 533


>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/613 (37%), Positives = 346/613 (56%), Gaps = 53/613 (8%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL--GFNVDLATMVTVLSGCANCGALM 284
           LS  ++ ++N ++  +  +      +  F   L L    N D  T  +VL  CA    ++
Sbjct: 85  LSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVL 144

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            G+ VH F  K      +   N+L+D+Y K G    A ++F++M  R VVSW ++I+GY 
Sbjct: 145 EGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYC 204

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
             G+ D A  +F GM                                       M+ +L 
Sbjct: 205 FSGMVDKARMVFDGM---------------------------------------MEKNLV 225

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN- 453
             + ++  YA+ G++ +A  +F  MP++++VSWN MI           A++LF  M    
Sbjct: 226 SWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEG 285

Query: 454 -FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
              P+ VT+  +L ACA L AL+ G+ IH +I R+ I     + NA+ DMY KCG ++ A
Sbjct: 286 GLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEA 345

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           + +F  +  +D+ISW+I+I G  M+G+  +A   F +M + G+EP+++SF+ +L AC+H+
Sbjct: 346 KGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHA 405

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           GLVD+G  +F+MM     I PK+EHY C+VDLLSR G L +A   I  MP+ P+  +WG+
Sbjct: 406 GLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGA 465

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           LL GCRI+ + +  E+V   + EL+ +++G  V LANVYA   + ++    R ++     
Sbjct: 466 LLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKS 525

Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 752
            K PGCSWIEI   V  F  G SSHP + +I S+++ L+ +MK  GY PKT   + N DE
Sbjct: 526 MKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDE 585

Query: 753 MEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRD 812
            EKE AL  HSEKLA+AFG++N   G TIR+ KNLRVC DCH+  K +SK   REIV+RD
Sbjct: 586 EEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRD 645

Query: 813 SNRFHHFKDGRCS 825
            +RFHHFKDG+CS
Sbjct: 646 RSRFHHFKDGKCS 658



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 193/360 (53%), Gaps = 19/360 (5%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSII----CESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           D  T+ S+L+ CA L  + +G+KVH  +    CES + + + ++    ++  V C  +  
Sbjct: 126 DEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVD---LYFKVGCNCI-- 180

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
            +++F+++    V  WN L+  Y  +G   ++  +F  M    +     ++S ++   A 
Sbjct: 181 AQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLV----SWSTMISGYAR 236

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLAT 269
           VGN   +++A +LF+ +  R+VVSWN MI+GY  N      +E+F++M + G    +  T
Sbjct: 237 VGN---LEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVT 293

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V+VLS CA+ GAL  G+ +H F  +      +   N L DMY+KCG +  A  VF +M 
Sbjct: 294 LVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMH 353

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ER V+SW+ +I G A  G  + A   F  M+ +G+EP+  +   +L AC   GL++ G +
Sbjct: 354 ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLE 413

Query: 390 VHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLF 447
             D + +   +   +     ++D+ ++ G +  AES+ N MP++ +++ W  ++G   ++
Sbjct: 414 YFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIY 473



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 174/364 (47%), Gaps = 40/364 (10%)

Query: 313 SKCGDLDGAIRVFEK-MGERSVVSWTSMIAGYAREGVFDGAIRLFRG--MVREGIEPDVY 369
           S  G+L  ++ +F   +   ++ ++ +++  +++   +   I  F    ++     PD Y
Sbjct: 69  SSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEY 128

Query: 370 AITSILHACACDGLLEI--GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
             TS+L ACA  GL ++  G+ VH ++ +   +S+L+V N+L+D+Y K G    A+ +F+
Sbjct: 129 TFTSVLKACA--GLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFD 186

Query: 428 QMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRH 487
           +M V+D+VSWNT+I                          C S   +++ R +   ++  
Sbjct: 187 EMVVRDVVSWNTLISGY-----------------------CFS-GMVDKARMVFDGMMEK 222

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
            + +     + ++  Y + G L  AR LF+ +P ++++SW  MIAGY  +    DAI  F
Sbjct: 223 NLVS----WSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELF 278

Query: 548 NDMR-QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
             M+ + G+ P++V+ +SVL AC+H G +D G      +R    IE  L     + D+ +
Sbjct: 279 RQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRN-KIEVGLFLGNALADMYA 337

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYY 664
           + G + EA      M    D   W  ++ G  ++     A      + E  LEP++  + 
Sbjct: 338 KCGCVLEAKGVFHEMH-ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFM 396

Query: 665 VLLA 668
            LL 
Sbjct: 397 GLLT 400


>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/514 (44%), Positives = 307/514 (59%), Gaps = 46/514 (8%)

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G+  D + +  +L +CA    + +G+ VH       ++   YV  +L+DMY KCG + DA
Sbjct: 102 GLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDA 161

Query: 423 ESVFNQMPVKDIVSWNTMIG---------------------------------------- 442
             +F++M V+D+ SWN +I                                         
Sbjct: 162 RKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAE 221

Query: 443 -ALDLFVAMLQN---FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
            AL LF  MLQ+    +P+ VT+  +LPACA  AALERGR IH +    G+  + +V  A
Sbjct: 222 QALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTA 281

Query: 499 IVDMYVKCGVLVLARSLFDMIP--AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           +  MY KC  LV AR  FDMI    K+LI+W  MI  Y  HG G +A++ F +M +AG++
Sbjct: 282 LAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQ 341

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           PD V+F+ +L  CSHSGL+D G   FN M    ++EP++EHYAC+VDLL R G L EA  
Sbjct: 342 PDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKE 401

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
            I  MP+    ++WG+LL  CR H  +++AE  A  +F LEPDN+G YVLL+N+YAEA  
Sbjct: 402 LISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGM 461

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           WEEVKKLR  +  +G+KK+PGCSWIEI GK ++F+    SHP AK+I   L+ L  ++K 
Sbjct: 462 WEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKM 521

Query: 737 EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
            GY P T + L +  E EKE  L  HSEKLA+AFG+LN   G  +RVTKNLR+CGDCH  
Sbjct: 522 AGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAA 581

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KF+SK   REI++RD NRFH FKDG CSC  +W
Sbjct: 582 TKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 168/355 (47%), Gaps = 45/355 (12%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T   +L+ CADL  +  G+ VH      G+   D  +G+ L+ M+V CG + + R++
Sbjct: 106 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLE-GDFYVGASLIDMYVKCGVIGDARKL 164

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+K+    +  WN L+  Y K G              +G+A D                 
Sbjct: 165 FDKMIVRDMASWNALIAGYMKEGE-------------IGVAED----------------- 194

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG--FNVDLATMVT 272
                   LF+ +  R++VSW  MISGY  NG AE+ L +F EML  G     +  T+V+
Sbjct: 195 --------LFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVS 246

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE-- 330
           VL  CA   AL  GR +H FA         S    L  MY+KC  L  A   F+ + +  
Sbjct: 247 VLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNG 306

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD- 389
           +++++W +MI  YA  G    A+ +F  M+R G++PD      +L  C+  GL++ G + 
Sbjct: 307 KNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNH 366

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            +D    + ++  +     ++D+  + G + +A+ + +QMP++   S W  ++ A
Sbjct: 367 FNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAA 421



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 176/388 (45%), Gaps = 55/388 (14%)

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           LE +  M  LG   D  T+  VL  CA+   +  GR VH   L+     +     +L+DM
Sbjct: 92  LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151

Query: 312 YSKCGDLDGAIRVFEKM------------------GE-------------RSVVSWTSMI 340
           Y KCG +  A ++F+KM                  GE             R++VSWT+MI
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211

Query: 341 AGYAREGVFDGAIRLFRGMVREGIE--PDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +GY + G  + A+ LF  M+++G E  P+   I S+L ACA    LE G+ +HD+     
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPV--KDIVSWNTMIG----------ALDL 446
           +  +  V  AL  MYAKC S+ +A   F+ +    K++++WNTMI           A+ +
Sbjct: 272 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 331

Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANAIVDMYV 504
           F  ML+   +PD VT   +L  C+    ++ G    +     H +         +VD+  
Sbjct: 332 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLG 391

Query: 505 KCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS-- 561
           + G LV A+ L   +P +   S W  ++A    H      IA     R   +EPD     
Sbjct: 392 RAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRN--LEIAELAARRLFVLEPDNSGNY 449

Query: 562 -FISVLYACSHSGLVDEGWRFFNMMRYE 588
             +S LYA   +G+ +E  +   +++Y+
Sbjct: 450 VLLSNLYA--EAGMWEEVKKLRALLKYQ 475



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 7/147 (4%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++ A I  + + G  E+A+    E+L    + K +  T  S+L  CA   +LE G+++H 
Sbjct: 206 SWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHD 265

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFI-WNLLMHEYSKTGN 178
                G+ ++  V  + L  M+  C  L E R  F+ I  NGK  I WN ++  Y+  G 
Sbjct: 266 FANGIGLHLNSSV-QTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGC 324

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVL 205
             E++ +F+ M   G+  D+ TF  +L
Sbjct: 325 GVEAVSIFENMLRAGVQPDAVTFMGLL 351


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/689 (34%), Positives = 389/689 (56%), Gaps = 44/689 (6%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T   +++ CA L +L  G+ VH      G+   D  +GS L+ M+   G L   R
Sbjct: 144 RPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGL-DRDMYVGSALIKMYADAGLLDGAR 202

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--- 209
            VF+ +D     +WN++M  Y K G+   ++ LF+ M++ G   +  T +C L   A   
Sbjct: 203 EVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEA 262

Query: 210 ---------------------VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMIS 240
                                 V N+        + +++A +LF  +   D+V+WN MIS
Sbjct: 263 DLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMIS 322

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G + NG+ +  L +F +M   G   D  T+ ++L           G+ +H + ++ C   
Sbjct: 323 GCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHV 382

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++   + L+D+Y KC D+  A  VF+      VV  ++MI+GY    + + A+++FR ++
Sbjct: 383 DVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLL 442

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
             GI+P+   + S L ACA    + IG+++H Y+ +N  +   YV +ALMDMY+KCG + 
Sbjct: 443 ALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLD 502

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACA 469
            +  +F++M  KD V+WN+MI           ALDLF  M ++  + + VT++ IL ACA
Sbjct: 503 LSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACA 562

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            L A+  G+EIHG I++  I AD    +A++DMY KCG L LA  +F+ +P K+ +SW  
Sbjct: 563 GLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNS 622

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           +I+ YG HG   +++     M++ G + D V+F++++ AC+H+G V EG R F  M  E 
Sbjct: 623 IISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEY 682

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
           +IEP++EH +CMVDL SR G L +A +FI  MP  PDA IWG+LL  CR+H  V+LAE  
Sbjct: 683 HIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIA 742

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           ++ +F+L+P N GYYVL++N+ A A +W+ V K+R  +  + ++K PG SW+++    ++
Sbjct: 743 SQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHL 802

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           FVA   +HP +++I   LK L +E+K+EG
Sbjct: 803 FVAADKNHPDSEEIYMSLKSLIIELKQEG 831



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 214/442 (48%), Gaps = 28/442 (6%)

Query: 214 SRRVKDAHKLFDELS---DRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLA 268
           +RR +DA  +F  L        + WN +I G+   G     +  + +M         D  
Sbjct: 89  ARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGH 148

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+  V+  CA  GAL  GR VH         +++   + L+ MY+  G LDGA  VF+ M
Sbjct: 149 TLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGM 208

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            ER  V W  M+ GY + G    A+ LFR M   G +P+   +   L  CA +  L  G 
Sbjct: 209 DERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGV 268

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
            +H    +  ++  + V+N L+ MYAKC  + +A  +F  MP  D+V+WN MI       
Sbjct: 269 QLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNG 328

Query: 443 ----ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
               AL LF  M ++  +PD VT+A +LPA   L   ++G+EIHGYI+R+    D  + +
Sbjct: 329 LVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVS 388

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           A+VD+Y KC  + +A+++FD   + D++  + MI+GY ++     A+  F  +   GI+P
Sbjct: 389 ALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKP 448

Query: 558 DEVSFISVLYACS-----HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           + V   S L AC+       G    G+   N     C +E      + ++D+ S+ G L 
Sbjct: 449 NAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVE------SALMDMYSKCGRLD 502

Query: 613 EAYRFIEMMPVAPDATIWGSLL 634
            ++     M  A D   W S++
Sbjct: 503 LSHYMFSKMS-AKDEVTWNSMI 523


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/644 (37%), Positives = 365/644 (56%), Gaps = 48/644 (7%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +F+ + + + + WN M  G+  +      L+++  M++LG   +  T   +L  CA 
Sbjct: 28  AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS---- 335
                 G+ +H   LK  F  ++  + +L+ MY++ G L+ A +VF++   R VVS    
Sbjct: 88  SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147

Query: 336 ---------------------------WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
                                      W +MI+GYA  G +  A+ LF+ M++  ++PD 
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
             + +++ ACA  G +E+G+ VH +I ++   S+L + NAL+D+Y+KCG +  A  +   
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALERG 477
           +  KD++SWNT+IG          AL LF  ML++ E P+ VTM  ILPACA L A++ G
Sbjct: 268 LSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 327

Query: 478 REIHGYILRH----GISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIA 532
           R IH YI +      ++   ++  +++DMY KCG +  A  + D     + L +W  MI 
Sbjct: 328 RWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIF 387

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           G+ MHG    A   F+ MR+ GIEPD+++F+ +L ACSHSG++D G   F  MR + NI 
Sbjct: 388 GFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNIT 447

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           PKLEHY CM+DLL  +G   EA   I  MP+ PD  IW SLL  C+IH  ++L E  A+ 
Sbjct: 448 PKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKK 507

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN-PGCSWIEIKGKVNIFV 711
           + ++EP+N G YVLL+N+YA A KW EV K+R  ++ +G+KK  PGCS IEI   V+ F+
Sbjct: 508 LIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFI 567

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFG 771
            G   HP  ++I  +L+ + + ++  G+ P T   L   +E  KE AL  HSEKLA+AFG
Sbjct: 568 IGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 627

Query: 772 ILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNR 815
           +++   G  + + KNLRVC +CHE  K +SK  +REI+ RD  R
Sbjct: 628 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 228/461 (49%), Gaps = 61/461 (13%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+  +L+ CA  K+ ++G+++H  + + G  +D  V  S L+ M+   G L++ ++VF++
Sbjct: 77  TFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTS-LISMYAQNGRLEDAQKVFDR 135

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
             +  V  +  L+  Y+  G                                       +
Sbjct: 136 SSHRDVVSYTALITGYASRG--------------------------------------YI 157

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           + A K+FDE+  +DVVSWN MISGY   G  +K LE+FKEM+      D +TM TV+S C
Sbjct: 158 ESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSAC 217

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A  G++  GR VH++     F   +   N L+D+YSKCG+++ A  + E +  + V+SW 
Sbjct: 218 AQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWN 277

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           ++I GY    ++  A+ LF+ M+R G  P+   + SIL ACA  G ++IG+ +H YI + 
Sbjct: 278 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK 337

Query: 398 DMQSSLYVSNA------LMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMI--------- 441
                + V+NA      L+DMYAKCG +  A  V +     + + +WN MI         
Sbjct: 338 --LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRA 395

Query: 442 -GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANA 498
             A D+F  M +N  EPD +T   +L AC+    L+ GR I   + + + I+        
Sbjct: 396 NAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGC 455

Query: 499 IVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
           ++D+    G+   A  + + +P + D + W  ++    +HG
Sbjct: 456 MIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG 496



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 157/393 (39%), Gaps = 76/393 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + E GN +KA+E+     K+ +  D  T  +++  CA   S+E G++VHS I
Sbjct: 174 SWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWI 233

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   +  ++ + L+ ++  CG+++    +   + N  V  WN L+  Y+    +KE+
Sbjct: 234 NDHGFGSNLKIVNA-LIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEA 292

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA----------------------VVGNSRRVK-- 218
           L LF++M   G   +  T   +L   A                      VV N+  ++  
Sbjct: 293 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTS 352

Query: 219 -----------DAHKLFDELS--DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                      DA     + S  +R + +WN MI G+  +G A    ++F  M   G   
Sbjct: 353 LIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 412

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T V +LS C++ G L  GR +         S    +N T    +  C          
Sbjct: 413 DDITFVGLLSACSHSGMLDLGRNIFR-------SMRQDYNITPKLEHYGC---------- 455

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
                        MI      G+F  A  +   M    +EPD     S+L AC   G LE
Sbjct: 456 -------------MIDLLGHSGLFKEAEEMINTM---PMEPDGVIWCSLLKACKIHGNLE 499

Query: 386 IGKD-VHDYIKENDMQSSLYVSNALMDMYAKCG 417
           +G+      IK        YV   L ++YA  G
Sbjct: 500 LGESFAKKLIKIEPENPGSYV--LLSNIYATAG 530



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 35/187 (18%), Positives = 85/187 (45%), Gaps = 5/187 (2%)

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  A S+F+ IP  + + W IM  G+ +      A+  +  M   G+ P+  +F  +L +
Sbjct: 25  LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           C+ S    EG +    +  +   +  L  +  ++ + ++ G L +A +  +      D  
Sbjct: 85  CAKSKTFKEGQQIHGHV-LKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFD-RSSHRDVV 142

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
            + +L+ G      ++ A+K+ +   E+   +   +  + + YAE   +++  +L +++ 
Sbjct: 143 SYTALITGYASRGYIESAQKMFD---EIPIKDVVSWNAMISGYAETGNYKKALELFKEMM 199

Query: 689 RRGLKKN 695
           +  +K +
Sbjct: 200 KTNVKPD 206


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/601 (38%), Positives = 347/601 (57%), Gaps = 43/601 (7%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           T+++ C     L  G+ VHA    + F   I  +N L+ MY+KCG L  A  +F+++ ++
Sbjct: 68  TLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQK 127

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLF---------------RGMVREG--IEP-DVYAITS 373
            + SW +MI+GYA  G  + A +LF                G V +G  +E  D++ +  
Sbjct: 128 DLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQ 187

Query: 374 ILHACACDGLLEI--------------GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
              +  C+                   GK++H Y+  + ++    V  AL+D+Y KCGS+
Sbjct: 188 ENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSL 247

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPAC 468
            +A  +F+QM  KDIVSW TMI              LF  ++     P+  T A +L AC
Sbjct: 248 NEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNAC 307

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A LAA + G+E+HGY+ R G       A+A+V +Y KCG    AR +F+ +P  DL+SWT
Sbjct: 308 ADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWT 367

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            +I GY  +G    A+  F  + ++G +PDE++F+ VL AC+H+GLVD G  +F+ ++ +
Sbjct: 368 SLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEK 427

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             +    +HYAC++DLL+R+G   EA   I+ MP+ PD  +W SLL GCRIH  ++LAE+
Sbjct: 428 HGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAER 487

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            A+ +FELEP+N   Y+ L+N+YA A  W E  K+R  +  RG+ K PG SWIEIK +V+
Sbjct: 488 AAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVH 547

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
           +F+ G +SHP    I   L  L  +MK EGY   T + L + +E +KE  +  HSEKLA+
Sbjct: 548 VFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAV 607

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           AFGI++   G  I+V KNLR C DCH   K++SK  +R+I++RDSNRFH F DG CSC+ 
Sbjct: 608 AFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKD 667

Query: 829 F 829
           +
Sbjct: 668 Y 668



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 249/514 (48%), Gaps = 57/514 (11%)

Query: 39  SSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKT 98
           SS+ H +  +NP   ++S     + + +   I  FC+   L++A++ L+   +     + 
Sbjct: 10  SSQFHKNLNLNPKDTTLSHH--SEHRRFEEIIELFCQQNRLKEAVDYLHRIPQP--SPRL 65

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y +++  C   + LE GK+VH+    S   I   V+ ++L+ M+  CG L + + +F++I
Sbjct: 66  YSTLIAACLRHRKLELGKRVHAHTKASNF-IPGIVISNRLIHMYAKCGSLVDAQMLFDEI 124

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
               +  WN ++  Y+  G  ++                                     
Sbjct: 125 PQKDLCSWNTMISGYANVGRIEQ------------------------------------- 147

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGC 277
            A KLFDE+  RD  SWN +ISGY++ G   + L++F+ M  N   N ++ T+ + L+  
Sbjct: 148 -ARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAA 206

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A   +L  G+ +H + +++    +      LLD+Y KCG L+ A  +F++M ++ +VSWT
Sbjct: 207 AAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWT 266

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           +MI     +G       LFR ++  G+ P+ Y    +L+ACA     ++GK+VH Y+   
Sbjct: 267 TMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRV 326

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLF 447
                 + ++AL+ +Y+KCG+   A  VFNQMP  D+VSW ++I           AL  F
Sbjct: 327 GYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFF 386

Query: 448 VAMLQN-FEPDGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYVK 505
            ++L++  +PD +T   +L AC     ++ G E  H    +HG+    +    ++D+  +
Sbjct: 387 ESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLAR 446

Query: 506 CGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
            G    A ++ D +P K D   W  ++ G  +HG
Sbjct: 447 SGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHG 480



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 171/407 (42%), Gaps = 72/407 (17%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++NA I  +   G   +A+++   +  +E S  +  T  S L   A + SL  GK++H  
Sbjct: 162 SWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGY 221

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +  SG+ +D+ V+ + L+ ++  CG L E R +F+++ +  +  W  ++H   + G  KE
Sbjct: 222 LIRSGLELDE-VVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKE 280

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------- 221
              LF+ +   G+  + YTF+ VL   A +   +  K+ H                    
Sbjct: 281 GFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVH 340

Query: 222 ------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                       ++F+++   D+VSW  +I GY  NG  +  L+ F+ +L  G   D  T
Sbjct: 341 VYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEIT 400

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V VLS C + G +  G                      L+ +    +  G +   +   
Sbjct: 401 FVGVLSACTHAGLVDIG----------------------LEYFHSVKEKHGLVHTADH-- 436

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
                 +  +I   AR G F  A  +   M    ++PD +   S+L  C   G +E+ + 
Sbjct: 437 ------YACVIDLLARSGRFKEAENIIDNMP---MKPDKFLWASLLGGCRIHGNIELAER 487

Query: 390 VHDYIKENDMQS-SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
               + E + ++ + Y++  L ++YA  G   +   V N M  + IV
Sbjct: 488 AAKALFELEPENPATYIT--LSNIYANAGLWTEETKVRNDMDNRGIV 532


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/763 (32%), Positives = 385/763 (50%), Gaps = 44/763 (5%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           LE G  VH+      +   + +  + ++   +  G L + R +F+ +       W +L+ 
Sbjct: 54  LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH---------- 221
            Y ++   KE+  L+  M+  GI  D  T   +L     +     +   H          
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173

Query: 222 ----------------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
                                 +LF  + ++D V++N +++GY   G+ E+ +E+F E+ 
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
           N G      T   +LS         FG+ VH F LK  F   +   N LLD YSK   +D
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
              ++F +M E   +S+  +I  YA  G F  +  LFR +     +   +   ++L    
Sbjct: 294 EVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIAT 353

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               L +G+ +H             V NAL+DMYAKC    +A+ +F+ +  K  V W  
Sbjct: 354 SSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTA 413

Query: 440 MIGA----------LDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHG 488
           MI A          +++F  M +   P D  T A IL ACA+LA++  GR++H  ++R G
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSG 473

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
             ++    +A++D Y KCG +  A   F  +P ++ +SW  +I+ Y  +G     + +F 
Sbjct: 474 FMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQ 533

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            M Q+G +PD VSF+SVL ACSH G V+E    FN M     + PK EHY  MVD+L R 
Sbjct: 534 QMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRN 593

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP-DNTGYYVLL 667
           G   EA + +  MP  P   +W S+L  CRIH   +LA+K A+ +F +E   +   Y+ +
Sbjct: 594 GRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINM 653

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLL 727
           +N+YA A +W+ V K+++ +  RG++K P  SW+EIK + ++F A   SHP  KKI   +
Sbjct: 654 SNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKI 713

Query: 728 KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNL 787
             L  EM+++GY P T  AL + DE+ K  +L  HSE+ A+AF ++N P G  I V KNL
Sbjct: 714 NALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNL 773

Query: 788 RVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           R C DCH   K +S+   REI++RDS+RFHHFKDG CSC  +W
Sbjct: 774 RACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 135/539 (25%), Positives = 240/539 (44%), Gaps = 56/539 (10%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGK---KVHSIICESG 126
           IG + +    ++A  +     +  I+   Y +++ L +    LE      ++H+ + + G
Sbjct: 112 IGGYLQSNQSKEAFRLYADMRRGGIEPD-YVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
              +  V  S LV  +     L    ++F  + N     +N LM  YS  G  +E++ LF
Sbjct: 171 YEYNLMVCNS-LVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229

Query: 187 KKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS-------- 214
            ++ + GI    +TF+ +L                             VGN+        
Sbjct: 230 LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH 289

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
            +V +  KLF E+ + D +S+N +I+ Y  NG  ++  ++F+++    F+       T+L
Sbjct: 290 DQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLL 349

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S   +   L  GR +H  A+    + E    N L+DMY+KC     A ++F+ +  +S V
Sbjct: 350 SIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTV 409

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
            WT+MI+ Y ++G  +  I +F  M R G+  D     SIL ACA    + +G+ +H  +
Sbjct: 410 PWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLL 469

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GAL 444
             +   S++Y  +AL+D YAKCG M DA   F +MP ++ VSWN +I          G L
Sbjct: 470 IRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTL 529

Query: 445 DLFVAMLQN-FEPDGVTMACILPACASLAALERGR-EIHGYILRHGISADRNVANAIVDM 502
           + F  M+Q+ ++PD V+   +L AC+    +E      +     + ++  R    ++VD+
Sbjct: 530 NSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDV 589

Query: 503 YVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGF------GCDAIATFNDMRQAG 554
             + G    A  L   +P     I W+ ++    +H          D +    D+R A 
Sbjct: 590 LCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAA 648



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 12/200 (6%)

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVS-NALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
           +  LE G  VH +   + M +   +S N ++  + K G ++ A  +F+ M  +  VSW  
Sbjct: 51  NNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTI 110

Query: 440 MIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           +IG          A  L+  M +   EPD VT+  +L     L       +IH ++++ G
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
              +  V N++VD Y K   L LA  LF  +  KD +++  ++ GY   G   +AI  F 
Sbjct: 171 YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFL 230

Query: 549 DMRQAGIEPDEVSFISVLYA 568
           ++  +GI+P + +F ++L A
Sbjct: 231 ELHNSGIKPSDFTFAALLSA 250



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 31/129 (24%)

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI--- 525
           A   +L     I  +I++ G + +   +N  V+ +++ G LV A  +FD +PAK+ I   
Sbjct: 19  APKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLN 78

Query: 526 ----------------------------SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
                                       SWTI+I GY       +A   + DMR+ GIEP
Sbjct: 79  MMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEP 138

Query: 558 DEVSFISVL 566
           D V+ +++L
Sbjct: 139 DYVTLVTLL 147


>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
 gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
 gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
          Length = 660

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/552 (42%), Positives = 338/552 (61%), Gaps = 20/552 (3%)

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F  +   +  L+D Y+  G+L  A +VF++   +S+  W +++   A     + A+    
Sbjct: 110 FRSDPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLA 169

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIG-----KDVHDYIKENDMQSSLYVSNALMDM 412
            M R  +  D Y+    L AC       +      +++H +          +V+  L+D 
Sbjct: 170 DMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLIDC 229

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML---QNFEPDGV 459
           YAK G ++ AESVF  MP +++VSW  MIG          A+ LF  M+   ++  P+ V
Sbjct: 230 YAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSV 289

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           T+ CIL A A + AL +G+ +H YILR G  +  +V NA++ MY+KCG L   R +FD+I
Sbjct: 290 TIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFDLI 349

Query: 520 -PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
              KD++SW  +I+GYGMHGFG +A+  F DM Q G+ P+ ++FISVL ACSH+GLVDEG
Sbjct: 350 GHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVLGACSHAGLVDEG 409

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
            R F  M  + N+ P+ EHYACMVDLL R G+L EA   I+ M + P   +WGSLL  CR
Sbjct: 410 KRLFESM-VDYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQVWGSLLGACR 468

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
           IH  V+ AE     +F+LEP N G YVLLA++YA A+   EV  L++ +    L+K PGC
Sbjct: 469 IHRHVEYAEMACSQLFDLEPRNAGNYVLLADIYARAKLHSEVGVLKDLLEEHALEKVPGC 528

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           SWIE+K ++++FV+  + +P  +++++L+     +MK +GY P T   L + +E EKE  
Sbjct: 529 SWIEVKKRLHMFVSVDNKNPQIEELQALIGEFVTQMKNDGYVPDTGAVLYDIEEEEKEKI 588

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
           L GHSEKLA+AFG++N   G+ IR+TKNLR+C DCH + KF+SK A REI++RD NRFHH
Sbjct: 589 LLGHSEKLAVAFGLINTGRGEVIRITKNLRLCEDCHSVTKFISKYAEREIIVRDVNRFHH 648

Query: 819 FKDGRCSCRGFW 830
           F+DG CSC  +W
Sbjct: 649 FRDGICSCGDYW 660



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 203/459 (44%), Gaps = 47/459 (10%)

Query: 26  FASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEV 85
           F   +P+  P      S S C    +++  S+       N N  +   C  G L +A  +
Sbjct: 14  FHLSRPAAGPRARPRVSRSRC----VASLASQPPTPPPANANHLVQTLCASGRLARAAAL 69

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L          +TY S+L   A          VH  +    +   D  L ++L+  + + 
Sbjct: 70  LQGLPAPT--QRTYKSVLLAAARAGDAALAAAVHRRLKADPVFRSDPFLSTRLIDAYASL 127

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G+L   R+VF++     +F+WN L+   +   + +E+L     M  L +  DSY+++  L
Sbjct: 128 GELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLADMGRLRVPVDSYSYAHGL 187

Query: 206 K-CLAV----VGNSRRVKDAH--------------------------------KLFDELS 228
           K C+A     V  S  V++ H                                 +F  + 
Sbjct: 188 KACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLIDCYAKLGIVSYAESVFATMP 247

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMFG 286
           +R+VVSW  MI  Y  N      + +F+EM+    ++  +  T+V +L   A   AL  G
Sbjct: 248 ERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALGQG 307

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAGYAR 345
           + +HA+ L+  F   +S  N L+ MY KCG L+    +F+ +G R  VVSW ++I+GY  
Sbjct: 308 KLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGM 367

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G    A+++F  M + G+ P++    S+L AC+  GL++ GK + + + + ++      
Sbjct: 368 HGFGHEAVQVFEDMTQMGVSPNIITFISVLGACSHAGLVDEGKRLFESMVDYNVTPRAEH 427

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
              ++D+  + G + +A  +   M ++     W +++GA
Sbjct: 428 YACMVDLLGRAGHLDEAVELIQGMHIRPSPQVWGSLLGA 466



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 144/309 (46%), Gaps = 19/309 (6%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC-- 277
           A ++FDE   + +  WN ++         E+ L    +M  L   VD  +    L  C  
Sbjct: 133 ARQVFDEAPVKSIFVWNALLKALALADHGEEALARLADMGRLRVPVDSYSYAHGLKACIA 192

Query: 278 ---ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
              ++  A    R +HA A++  +        TL+D Y+K G +  A  VF  M ER+VV
Sbjct: 193 ASTSHVPASALVREIHAHAVRRGYGLHTHVATTLIDCYAKLGIVSYAESVFATMPERNVV 252

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVR--EGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           SWT+MI  YA+      AI LF+ MV   E + P+   I  ILHA A    L  GK +H 
Sbjct: 253 SWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHA 312

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM-PVKDIVSWNTMIG--------- 442
           YI      S + V NALM MY KCG +     +F+ +   KD+VSWNT+I          
Sbjct: 313 YILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGH 372

Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            A+ +F  M Q    P+ +T   +L AC+    ++ G+ +   ++ + ++        +V
Sbjct: 373 EAVQVFEDMTQMGVSPNIITFISVLGACSHAGLVDEGKRLFESMVDYNVTPRAEHYACMV 432

Query: 501 DMYVKCGVL 509
           D+  + G L
Sbjct: 433 DLLGRAGHL 441


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/644 (37%), Positives = 368/644 (57%), Gaps = 18/644 (2%)

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD--RDVVSWNC 237
           K +  +  ++ +  + +  + F+ +L   A  G+   V     LF    D  ++VVSW  
Sbjct: 44  KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGS---VDQTLLLFSSAPDDSKNVVSWTS 100

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I+         K L  F  M   G   +  T   VLS C +  A + G  +H+   K  
Sbjct: 101 LITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHG 160

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F  E+   + L+DMY+KC D+  A +VFE+M  R++VSW +MI G+ +  ++D AI  F+
Sbjct: 161 FLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFK 220

Query: 358 GMVREGIEP-DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
            ++ E +   D  + +S+  ACA  G LE GK VH    +  + + +Y++N+L DMY KC
Sbjct: 221 TLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKC 280

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIGAL-----------DLFVAMLQNFEPDGVTMACIL 465
           G   D   +F+    +D+V+WN MI A              ++   +   PD  + + +L
Sbjct: 281 GLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVL 340

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
            +CA+LAAL +G  IH  I+R G   +  VA++++ MY KCG LV A  +F+    ++++
Sbjct: 341 HSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVV 400

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
            WT +IA    HG     +  F  M + GI+PD ++F+SVL ACSH+G V+EG+ +FN M
Sbjct: 401 CWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSM 460

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
                I P  EHYAC+VDLLSR G L  A RFIE+MP+ PDA++WG+LL  CR H  + +
Sbjct: 461 IKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIM 520

Query: 646 AEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
            ++VA  +F+LEPDN G YVLL N+        E  ++R K+   G++K PGCSWI+IK 
Sbjct: 521 GKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKN 580

Query: 706 KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEK 765
              +F     SH   K+I  +L++L+  +K++GY  +T +A IN  E  KE +L  HSEK
Sbjct: 581 STYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFA-INTAEEYKEQSLWYHSEK 639

Query: 766 LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIV 809
           +A+AFG+L+LPAG  IR+ KNLR CGDCH + KF S+   REI+
Sbjct: 640 IALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREII 683



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 178/381 (46%), Gaps = 36/381 (9%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ ++L  C D  +   G+++HS++ + G + +  V+ S LV M+  C D+    +VF +
Sbjct: 132 TFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVV-SALVDMYAKCCDMLMAEKVFEE 190

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA-DSYTFSCVLKCLAVVGNSRR 216
           +    +  WN ++  + +   + ++++ FK +    + A D  +FS V    A  GN   
Sbjct: 191 MPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEF 250

Query: 217 VKDAH--------------------------------KLFDELSDRDVVSWNCMISGYIA 244
            K  H                                KLF     RDVV+WN MI  Y+ 
Sbjct: 251 GKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVY 310

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           N   E     F  M   G   D A+  +VL  CAN  AL  G  +H   +++ F K +  
Sbjct: 311 NHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRV 370

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            ++L+ MY+KCG L  A ++FE+  +R+VV WT++IA   + G  +  + LF  M+REGI
Sbjct: 371 ASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGI 430

Query: 365 EPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           +PD     S+L AC+  G +E G    +  IK + +         ++D+ ++ G +  A+
Sbjct: 431 KPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAK 490

Query: 424 SVFNQMPVK-DIVSWNTMIGA 443
                MP+K D   W  ++ A
Sbjct: 491 RFIELMPIKPDASVWGALLSA 511



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 14/227 (6%)

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P ++ +TS+     C    +    +H  +    + S  ++ N L+++YAKCGS+     +
Sbjct: 25  PFLHPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLL 84

Query: 426 FNQMP--VKDIVSWNTMIGALDLFVAMLQNFE-----------PDGVTMACILPACASLA 472
           F+  P   K++VSW ++I  L  F    +              P+  T + +L AC    
Sbjct: 85  FSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTT 144

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           A   G ++H  + +HG  A+  V +A+VDMY KC  +++A  +F+ +P ++L+SW  MI 
Sbjct: 145 ASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIV 204

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEP-DEVSFISVLYACSHSGLVDEG 578
           G+  +     AI  F  +    +   DEVSF SV  AC+++G ++ G
Sbjct: 205 GFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFG 251



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 128/286 (44%), Gaps = 37/286 (12%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           + +D  ++ S+   CA+  +LE GK+VH +  + G V +   + + L  M+  CG   + 
Sbjct: 228 TALDEVSFSSVFSACANAGNLEFGKQVHGVALKLG-VWNLVYINNSLSDMYGKCGLFNDV 286

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-- 209
            ++F+      V  WN+++  Y    N++++   F  M+  G   D  ++S VL   A  
Sbjct: 287 AKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANL 346

Query: 210 -----------------VVGNSR-------------RVKDAHKLFDELSDRDVVSWNCMI 239
                             V N R              + DA ++F+E  DR+VV W  +I
Sbjct: 347 AALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAII 406

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK--AC 297
           +    +G A   +E+F++ML  G   D  T V+VLS C++ G +  G       +K    
Sbjct: 407 AACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGI 466

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAG 342
           +     +   ++D+ S+ G+LD A R  E M  +   S W ++++ 
Sbjct: 467 YPGHEHY-ACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSA 511



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 17/241 (7%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  +Y S+L  CA+L +L  G  +H+ I  SG V +  V  S L+ M+  CG L +  ++
Sbjct: 332 DEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRV-ASSLITMYAKCGSLVDAFQI 390

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F + ++  V  W  ++    + G+    + LF++M   GI  D  TF  VL   +  G  
Sbjct: 391 FEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTG-- 448

Query: 215 RRVKDAHKLFDELSDRDVV-----SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
            RV++    F+ +     +      + C++      G  ++  + F E++ +    D + 
Sbjct: 449 -RVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRA-KRFIELMPI--KPDASV 504

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL--DMYSKCGDLDGAIRVFEK 327
              +LS C N   L+ G+ V   ALK    +  +  N +L  ++ ++ G L+ A  V  K
Sbjct: 505 WGALLSACRNHSNLIMGKEV---ALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRK 561

Query: 328 M 328
           M
Sbjct: 562 M 562


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/546 (41%), Positives = 329/546 (60%), Gaps = 33/546 (6%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N L+  Y + G +  A +VF+KM ER+VVSWT+MI GY +EG+ + A  LF  M     E
Sbjct: 29  NGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMP----E 84

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
            +V + T +L     DG ++  + + D +   D    +  S  ++D     G + +A  +
Sbjct: 85  RNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKD----VVASTNMIDGLCSEGRLIEAREI 140

Query: 426 FNQMPVKDIVSWNTMIG-----------------------ALDLFVAML-QNFEPDGVTM 461
           F++MP +++V+W +MI                        AL LF  M  +   P   ++
Sbjct: 141 FDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSV 200

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
             +L  C SLA+L+ GR++H  ++R     D  V++ ++ MY+KCG LV A+ +FD   +
Sbjct: 201 ISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSS 260

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           KD++ W  +IAGY  HGFG  A+  F+DM  + I PDE++FI VL ACS++G V EG   
Sbjct: 261 KDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEI 320

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           F  M+ +  ++PK EHYACMVDLL R G L+EA   IE MPV  DA +WG+LL  CR H 
Sbjct: 321 FESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHK 380

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
            + LAE  A+ + +LEP+N G Y+LL+N+Y+   +W++V +LR+ +  + L+K+PGCSWI
Sbjct: 381 NLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWI 440

Query: 702 EIKGKVNIFVAGGS-SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALC 760
           E+  KV+IF  GGS SHP  + I   L +L   ++  GY P   + + + DE EK  +L 
Sbjct: 441 EVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLR 500

Query: 761 GHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFK 820
            HSEKLA+A+G+L +P G  IRV KNLRVCGD H   K +++   REI+LRD+NRFHHFK
Sbjct: 501 DHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFK 560

Query: 821 DGRCSC 826
           DG CSC
Sbjct: 561 DGLCSC 566



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 167/347 (48%), Gaps = 43/347 (12%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA- 196
           LV  +V  G + E R+VF+K+    V  W  ++  Y + G  +E+  LF +M    + + 
Sbjct: 31  LVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVVSW 90

Query: 197 --------------DSYTFSCVLKCLAVVGNSR---------RVKDAHKLFDELSDRDVV 233
                         ++     ++    VV ++          R+ +A ++FDE+  R+VV
Sbjct: 91  TVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVV 150

Query: 234 SWNCMISG-------------YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
           +W  MISG             Y   G   + L +F  M   G      ++++VLS C + 
Sbjct: 151 AWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSL 210

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
            +L  GR VH+  +++ F  +I  ++ L+ MY KCGDL  A RVF++   + +V W S+I
Sbjct: 211 ASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSII 270

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN--- 397
           AGYA+ G  + A+ +F  M    I PD      +L AC+  G ++ G ++ + +K     
Sbjct: 271 AGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQV 330

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           D ++  Y    ++D+  + G + +A ++   MPV+ D + W  ++GA
Sbjct: 331 DPKTEHYA--CMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGA 375



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 184/415 (44%), Gaps = 72/415 (17%)

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
           +E R++F+K+       WN L+  Y + G   E                           
Sbjct: 11  REARKLFDKMPETNTISWNGLVSGYVQNGMISE--------------------------- 43

Query: 209 AVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      A K+FD++ +R+VVSW  MI GY+  G+ E+   +F  M       ++ 
Sbjct: 44  -----------ARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPER----NVV 88

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           +   +L G    G +   R +  F +     K++  +  ++D     G L  A  +F++M
Sbjct: 89  SWTVMLGGLIEDGRVDEARQL--FDMMPV--KDVVASTNMIDGLCSEGRLIEAREIFDEM 144

Query: 329 GERSVVSWTSMIAG-------------YAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
            +R+VV+WTSMI+G             Y R+G    A+ LF  M REG+ P   ++ S+L
Sbjct: 145 PQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVL 204

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
             C     L+ G+ VH  +  +     +YVS+ L+ MY KCG +  A+ VF++   KDIV
Sbjct: 205 SVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIV 264

Query: 436 SWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYI 484
            WN++I           AL++F  M   +  PD +T   +L AC+    ++ G EI   +
Sbjct: 265 MWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESM 324

Query: 485 L-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
             ++ +         +VD+  + G L  A +L + +P + D I W  ++     H
Sbjct: 325 KSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTH 379



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)

Query: 82  AMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM 141
           A+  L   E  +    +  S+L +C  L SL+ G++VHS +  S   ID  V  S L+ M
Sbjct: 183 ALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYV-SSVLITM 241

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           ++ CGDL   +RVF++  +  + +WN ++  Y++ G  +++L +F  M S  IA D  TF
Sbjct: 242 YIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITF 301

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDELS-----DRDVVSWNCMISGYIANGVAEKGLEVFK 256
             VL   +  G   +VK+  ++F+ +      D     + CM+      G A K  E   
Sbjct: 302 IGVLSACSYTG---KVKEGLEIFESMKSKYQVDPKTEHYACMVDLL---GRAGKLNEAMN 355

Query: 257 EMLNLGFNVDLATMVTVLSGC 277
            + N+    D      +L  C
Sbjct: 356 LIENMPVEADAIVWGALLGAC 376



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 9/112 (8%)

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           AR LFD +P  + ISW  +++GY  +G   +A   F+ M +  +    VS+ +++     
Sbjct: 13  ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNV----VSWTAMIRGYVQ 68

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            GL++E    F  M      E  +  +  M+  L   G + EA +  +MMPV
Sbjct: 69  EGLIEEAELLFWRMP-----ERNVVSWTVMLGGLIEDGRVDEARQLFDMMPV 115


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/639 (36%), Positives = 381/639 (59%), Gaps = 21/639 (3%)

Query: 205 LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
           LKC +VV        A K+FDE+  R +V+WN MI+ YI NG +++ +++++ M+  G  
Sbjct: 121 LKCGSVVY-------ARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL 173

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFS-KEISFNNTLLDMYSKCGDLDGAIR 323
            D  T  +V    ++ G +  G+  H  ++        +   + L+DMY+K G +  A  
Sbjct: 174 PDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARL 233

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           V +++  + VV +T++I GY+  G    ++++FR M ++GIE + Y ++S+L  C     
Sbjct: 234 VSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLED 293

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           L  G+ +H  I +  ++S++    +L+ MY +CG + D+  VF Q    + V+W ++I  
Sbjct: 294 LTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVG 353

Query: 443 ---------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    AL  F  ML++   P+  T++ +L AC+SLA LE+G++IH  +++ G+  D
Sbjct: 354 LVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDID 413

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
           + V  A++D Y KCG   +ARS+F+ +   D++S   MI  Y  +GFG +A+  F+ M+ 
Sbjct: 414 KYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKD 473

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
            G+EP+ V+++ VL AC+++GL++EG   F+  R   NIE   +HYACMVDLL R G L 
Sbjct: 474 TGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLK 533

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           EA   I  + ++ D  IW +LL  CRIH +V++A++V   V +L P++ G +VLL+N+YA
Sbjct: 534 EAEMLINQVNIS-DVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYA 592

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
               W +V +++  +    LKKNP  SW++++ +++ F+AG  SHP+ + I   L+ L  
Sbjct: 593 STGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIE 652

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP-AGQTIRVTKNLRVCG 791
           ++K  GY P TR+ L + DE +K  +L  HSEKLA+AF +        TIR+ KNLRVCG
Sbjct: 653 KVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCG 712

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   KF+SK   R+I+ RD  RFHHF++G CSC  +W
Sbjct: 713 DCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 240/488 (49%), Gaps = 48/488 (9%)

Query: 96  TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVF 155
           TK Y S++Q C  +KS+ D  K+ S   + G       LG+KL+  ++ CG +   R+VF
Sbjct: 77  TKLYSSLIQQCIGIKSITDITKIQSHALKRGF---HHSLGNKLIDAYLKCGSVVYARKVF 133

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVG 212
           +++ +  +  WN ++  Y + G  KE++ ++++M   GI  D +TFS V K    L +V 
Sbjct: 134 DEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVH 193

Query: 213 NSRR------------------------------VKDAHKLFDELSDRDVVSWNCMISGY 242
             +R                              ++DA  + D++  +DVV +  +I GY
Sbjct: 194 EGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGY 253

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             +G   + L+VF+ M   G   +  T+ +VL  C N   L  GR +H   +KA     +
Sbjct: 254 SHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAV 313

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
           +   +LL MY +CG +D +++VF++    + V+WTS+I G  + G  + A+  FR M+R 
Sbjct: 314 ASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRS 373

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
            I P+ + ++S+L AC+   +LE GK +H  + +  +    YV  AL+D Y KCGS   A
Sbjct: 374 SITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIA 433

Query: 423 ESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASL 471
            SVFN +   D+VS N+MI           AL LF  M     EP+ VT   +L AC + 
Sbjct: 434 RSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNA 493

Query: 472 AALERGREIHGYILRHG-ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
             LE G  I       G I   ++    +VD+  + G L  A  L + +   D++ W  +
Sbjct: 494 GLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTL 553

Query: 531 IAGYGMHG 538
           ++   +HG
Sbjct: 554 LSACRIHG 561



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 191/415 (46%), Gaps = 39/415 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ I  +   G  ++A+++        I  D  T+ S+ +  +DL  + +G++ H    
Sbjct: 144 WNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSV 203

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             G+ + +  +GS LV M+   G +++ R V +++    V ++  L+  YS  G   ESL
Sbjct: 204 VLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESL 263

Query: 184 YLFKKMQSLGIAADSYTFSCVLKC--------------------------------LAVV 211
            +F+ M   GI A+ YT S VL C                                L + 
Sbjct: 264 QVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMY 323

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                V D+ K+F +  + + V+W  +I G + NG  E  L  F++ML      +  T+ 
Sbjct: 324 YRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLS 383

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +VL  C++   L  G+ +HA  +K     +      L+D Y KCG  + A  VF  + E 
Sbjct: 384 SVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEV 443

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            VVS  SMI  YA+ G    A++LF GM   G+EP+      +L AC   GLLE G  + 
Sbjct: 444 DVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIF 503

Query: 392 DYIKEN---DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
              + +   ++    Y    ++D+  + G + +AE + NQ+ + D+V W T++ A
Sbjct: 504 SSARNSGNIELTKDHYA--CMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSA 556



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 183/352 (51%), Gaps = 17/352 (4%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +++  C    ++     + + ALK  F    S  N L+D Y KCG +  A +VF+++  R
Sbjct: 82  SLIQQCIGIKSITDITKIQSHALKRGFHH--SLGNKLIDAYLKCGSVVYARKVFDEVPHR 139

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            +V+W SMIA Y R G    AI +++ MV +GI PD +  +S+  A +  GL+  G+  H
Sbjct: 140 HIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAH 199

Query: 392 -DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--------- 441
              +      S+++V +AL+DMYAK G M DA  V +Q+  KD+V +  +I         
Sbjct: 200 GQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGED 259

Query: 442 -GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             +L +F  M +   E +  T++ +L  C +L  L  GR IHG I++ G+ +      ++
Sbjct: 260 GESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSL 319

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + MY +CG++  +  +F      + ++WT +I G   +G    A+  F  M ++ I P+ 
Sbjct: 320 LTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNS 379

Query: 560 VSFISVLYACSHSGLVDEGWRFFNM-MRYECNIEPKLEHYACMVDLLSRTGN 610
            +  SVL ACS   ++++G +   + M++  +I+  +   A ++D   + G+
Sbjct: 380 FTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVG--AALIDFYGKCGS 429



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 3/181 (1%)

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
           + ++  C  + ++    +I  + L+ G     ++ N ++D Y+KCG +V AR +FD +P 
Sbjct: 81  SSLIQQCIGIKSITDITKIQSHALKRGFH--HSLGNKLIDAYLKCGSVVYARKVFDEVPH 138

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           + +++W  MIA Y  +G   +AI  +  M   GI PDE +F SV  A S  GLV EG R 
Sbjct: 139 RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRA 198

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
                        +   + +VD+ ++ G + +A R +    V  D  ++ +L+ G   H 
Sbjct: 199 HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA-RLVSDQVVGKDVVLFTALIVGYSHHG 257

Query: 642 E 642
           E
Sbjct: 258 E 258


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/734 (33%), Positives = 394/734 (53%), Gaps = 47/734 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  +   G+  K ++V     +  +  D  T+  +L+ C+ L+    G ++H + 
Sbjct: 141 SWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLA 200

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   D  V GS L+ M+  C  L    + F+ +       W+ ++    +  + +  
Sbjct: 201 VKMGFDCD-VVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGG 259

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS---- 214
           L LFK+MQ  G+     TF+ V +  A                        V+G +    
Sbjct: 260 LELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDM 319

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 + DA KLF+ L + ++ S+N +I GY  +    + L +F+ +   G  +D  ++
Sbjct: 320 YMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSL 379

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
                 CA     + G  VH  ++K+     I   N +LDMY KCG L  A  VFE+M  
Sbjct: 380 SGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 439

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R  VSW ++IA + + G  +  + LF  M++ G+EPD +   S+L ACA    L  G ++
Sbjct: 440 RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEI 499

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL---- 446
           H+ I ++ +    +V  AL+DMY+KCG M  AE + +++  + +VSWN +I    L    
Sbjct: 500 HNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQS 559

Query: 447 ------FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
                 F  ML+   +PD  T A IL  CA+L  +E G++IH  I++  + +D  +++ +
Sbjct: 560 EEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTL 619

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY KCG +   + +F+  P +D ++W  M+ GY  HG G +A+  F  M+   ++P+ 
Sbjct: 620 VDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNH 679

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            +F++VL AC H GLV++G  +F+ M     ++P+LEHY+C+VD++ R+G +S+A   IE
Sbjct: 680 ATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIE 739

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP   DA IW +LL  C+IH  V++AEK A  + +LEP+++  YVLL+N+YA A  W E
Sbjct: 740 GMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNE 799

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V KLR+ +   GLKK PGCSWIEIK +V+ F+ G  +HP +K+I   L  L  EMK  GY
Sbjct: 800 VTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGY 859

Query: 740 FPKTRYALINADEM 753
            P T + ++N DE+
Sbjct: 860 MPDTDF-ILNDDEL 872



 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 188/660 (28%), Positives = 318/660 (48%), Gaps = 80/660 (12%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS--IICE--------------------- 124
           S + +    KT+  I Q C+D K+L  GK+ H+  I+ E                     
Sbjct: 34  SYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDL 93

Query: 125 -------SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
                   G+   D V  + ++F +   GD+   +++F+ +    V  WN L+  Y   G
Sbjct: 94  EFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNG 153

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLK------------------------CLAVVGN 213
           + ++ + +F +M  +G   D  TF+ VLK                        C  V G+
Sbjct: 154 DHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGS 213

Query: 214 S--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           +        +++  + + F  + +++ VSW+ +I+G + N     GLE+FKEM   G  V
Sbjct: 214 ALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGV 273

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
             +T  +V   CA   AL  G  +H  ALK  F  ++      LDMY KC +L  A ++F
Sbjct: 274 SQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLF 333

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC-DGLL 384
             +   ++ S+ ++I GYAR      A+ +FR + + G+  D  +++    ACA   G L
Sbjct: 334 NSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDL 393

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA- 443
           E G  VH    ++  QS++ V+NA++DMY KCG++ +A  VF +M  +D VSWN +I A 
Sbjct: 394 E-GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAH 452

Query: 444 ---------LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                    L LFV MLQ+  EPD  T   +L ACA   AL  G EIH  I++  +  D 
Sbjct: 453 EQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDS 512

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            V  A++DMY KCG++  A  L D +  + ++SW  +I+G+ +     +A  TF+ M + 
Sbjct: 513 FVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 572

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           G++PD  ++ ++L  C++   V+ G +    +++ E   +  +   + +VD+ S+ GN+ 
Sbjct: 573 GVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS--STLVDMYSKCGNMQ 630

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           +     E  P   D   W +++CG   H   + A K+ E++ +LE     +   LA + A
Sbjct: 631 DFQLIFEKAP-NRDFVTWNAMVCGYAQHGLGEEALKIFEYM-QLENVKPNHATFLAVLRA 688



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 202/418 (48%), Gaps = 45/418 (10%)

Query: 64  KNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++YNA I  +       +A+ +    +KS +  D  +     + CA +K   +G +VH +
Sbjct: 342 QSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGL 401

Query: 122 ----ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
               +C+S I + + +L      M+  CG L E   VF ++ +     WN ++  + + G
Sbjct: 402 SMKSLCQSNICVANAILD-----MYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNG 456

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--------VVGNSRRVKD---------- 219
           N +++L LF  M   G+  D +T+  VLK  A        +  ++R +K           
Sbjct: 457 NEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI 516

Query: 220 --------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                         A KL D L+++ VVSWN +ISG+     +E+  + F +ML +G + 
Sbjct: 517 ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 576

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T  T+L  CAN   +  G+ +HA  +K     +   ++TL+DMYSKCG++     +F
Sbjct: 577 DNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIF 636

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           EK   R  V+W +M+ GYA+ G+ + A+++F  M  E ++P+     ++L AC   GL+E
Sbjct: 637 EKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVE 696

Query: 386 IGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
            G    H  +    +   L   + ++D+  + G ++ A  +   MP + D V W T++
Sbjct: 697 KGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 754



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 218/500 (43%), Gaps = 81/500 (16%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T   +   C++  AL  G+  HA  +   F   +   N L+ MY KC DL+ A +VF+ M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL--------HACAC 380
            +R  VSW +M+ GYA  G    A +LF  M     E DV +  S++        H    
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMP----ERDVVSWNSLISGYLHNGDHRKVI 159

Query: 381 DGLLEIGK---------------------------DVHDYIKENDMQSSLYVSNALMDMY 413
           D  L++G+                            +H    +      +   +AL+DMY
Sbjct: 160 DVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMY 219

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFEPDGV---- 459
           AKC  +  +   F+ MP K+ VSW+ +I          G L+LF  M    +  GV    
Sbjct: 220 AKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEM----QKAGVGVSQ 275

Query: 460 -TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
            T A +  +CA L+AL  G ++HG+ L+     D  +  A +DMY+KC  L  A+ LF+ 
Sbjct: 276 STFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS 335

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +P  +L S+  +I GY     G +A+  F  ++++G+  DEVS      AC+      EG
Sbjct: 336 LPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEG 395

Query: 579 WRFFNM-MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
            +   + M+  C  +  +     ++D+  + G L EA    E M V+ DA  W +++   
Sbjct: 396 LQVHGLSMKSLC--QSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAA- 451

Query: 638 RIHHEVKLAEKVAEHVF------ELEPDNTGYYVLLANVYAEAEKWEEVK---KLREKI- 687
              HE    E+    +F       +EPD   Y     +V      W+ +    ++  +I 
Sbjct: 452 ---HEQNGNEEKTLSLFVWMLQSGMEPDEFTY----GSVLKACAGWQALNCGMEIHNRII 504

Query: 688 -SRRGLKKNPGCSWIEIKGK 706
            SR GL    G + I++  K
Sbjct: 505 KSRLGLDSFVGIALIDMYSK 524


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/580 (39%), Positives = 348/580 (60%), Gaps = 12/580 (2%)

Query: 263 FNVDLATMV-TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           FN    + V  +L  CA    L+ G+A HA  L      ++  +N L++MYSKCG +D A
Sbjct: 59  FNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFA 118

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            +VF++M  RS+VSW +MI    + G  + A+ L   M REG     + I+S+L ACA  
Sbjct: 119 RQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAK 178

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             L   + +H +  +  M  +++V+ AL+D+YAKCG M DA  VF  MP + +V+W++M 
Sbjct: 179 CALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMA 238

Query: 442 G----------ALDLF-VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      AL LF  A     + D   M+ ++ ACA LAA+  G++++  + + G  
Sbjct: 239 AGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFC 298

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
           ++  VA++++DMY KCG +  +  +F  +  ++++ W  MI+G   H    + +  F  M
Sbjct: 299 SNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKM 358

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
           +Q G+ P++V+F+SVL AC H GLV +G ++F++M  E ++ P + HY+CMVD LSR G 
Sbjct: 359 QQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQ 418

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
           + EAY  I  +P    A++WGSLL  CR H  ++LAE  A+ +F++EP N+G Y+LL+N+
Sbjct: 419 IFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNM 478

Query: 671 YAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL 730
           YA   KW+EV K+R+ +    +KK  G SWIEIK KV++F+ G  +HP   +I S L  +
Sbjct: 479 YAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEV 538

Query: 731 RLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVC 790
             E+++ GY  +T++ L    E  K+  L  HSEKLA   G+L LP    IR+ KNLR+C
Sbjct: 539 MDELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRIC 598

Query: 791 GDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           GDCH   K  SK   R++++RD+NRFHHFK+G CSC  FW
Sbjct: 599 GDCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 191/362 (52%), Gaps = 20/362 (5%)

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
           +G+  D  T + ++   +  G+   V  A ++FDE+  R +VSWN MI     NG   + 
Sbjct: 93  MGLKTDLLTSNILINMYSKCGS---VDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEA 149

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           L++  +M   G      T+ +VL  CA   AL   + +HAFA+KA     +     LLD+
Sbjct: 150 LDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDV 209

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+KCG +  A+ VFE M +RSVV+W+SM AGY +  +++ A+ LFR     G++ D + +
Sbjct: 210 YAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLM 269

Query: 372 TSILHACACDGLLEI--GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           +S++  CAC GL  +  GK V+  + ++   S+++V+++L+DMYAKCG + ++  VF  +
Sbjct: 270 SSVI--CACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDV 327

Query: 430 PVKDIVSWNTMIGALD----------LFVAMLQ-NFEPDGVTMACILPACASLAALERGR 478
             +++V WN MI  L           LF  M Q    P+ VT   +L AC  +  +++G+
Sbjct: 328 EKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQ 387

Query: 479 EIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGM 536
           +    + + H ++ +    + +VD   + G +  A  L   +P     S W  ++A    
Sbjct: 388 KYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRT 447

Query: 537 HG 538
           HG
Sbjct: 448 HG 449



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 189/377 (50%), Gaps = 37/377 (9%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK-LVFMFVTCGDLKEGRRVFNKIDN 160
           IL+LCA  K L  GK  H+ I   G+  D  +L S  L+ M+  CG +   R+VF+++ +
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTD--LLTSNILINMYSKCGSVDFARQVFDEMPS 127

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-----KC-------- 207
             +  WN ++   ++ G   E+L L  +MQ  G     +T S VL     KC        
Sbjct: 128 RSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLL 187

Query: 208 -------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                              L V      +KDA  +F+ + DR VV+W+ M +GY+ N + 
Sbjct: 188 HAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMY 247

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           E+ L +F++    G   D   M +V+  CA   A++ G+ V+A   K+ F   I   ++L
Sbjct: 248 EQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSL 307

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           +DMY+KCG ++ + +VF  + +R+VV W +MI+G +R       + LF  M + G+ P+ 
Sbjct: 308 IDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPND 367

Query: 369 YAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
               S+L AC   GL++ G+   D + KE+ +  +++  + ++D  ++ G + +A  + +
Sbjct: 368 VTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427

Query: 428 QMPVKDIVS-WNTMIGA 443
           ++P     S W +++ +
Sbjct: 428 KLPFNASASMWGSLLAS 444



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 19/249 (7%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D     S++  CA L ++ +GK+V++++ +SG    +  + S L+ M+  CG ++E  
Sbjct: 263 KHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFC-SNIFVASSLIDMYAKCGGIEESY 321

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           +VF  ++   V +WN ++   S+     E + LF+KMQ +G++ +  TF  V   L+  G
Sbjct: 322 KVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSV---LSACG 378

Query: 213 NSRRVKDAHKLFDELSDR-----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           +   VK   K FD ++       +V  ++CM+      G   +  E +  +  L FN   
Sbjct: 379 HMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAG---QIFEAYDLISKLPFNASA 435

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI--SFNNTLL-DMYSKCGDLDGAIRV 324
           +   ++L+ C   G L         A K  F  E   S N  LL +MY+  G  D   ++
Sbjct: 436 SMWGSLLASCRTHGNLELAEV----AAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKM 491

Query: 325 FEKMGERSV 333
            + + E  V
Sbjct: 492 RKLLKESDV 500



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 150/333 (45%), Gaps = 41/333 (12%)

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLE 113
           S++LV    ++N  IG   + G   +A+++L   ++  +     T  S+L  CA   +L 
Sbjct: 127 SRSLV----SWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALS 182

Query: 114 DGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
           + + +H+   ++ + ++  V  + L+ ++  CG +K+   VF  + +  V  W+ +   Y
Sbjct: 183 ECQLLHAFAIKAAMDLNVFV-ATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGY 241

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFS---CVLKCLAVVGNSRRV------------- 217
            +   ++++L LF+K    G+  D +  S   C    LA +   ++V             
Sbjct: 242 VQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNI 301

Query: 218 ----------------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                           ++++K+F ++  R+VV WN MISG   +  + + + +F++M  +
Sbjct: 302 FVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQM 361

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDG 320
           G + +  T V+VLS C + G +  G+       K    +  +   + ++D  S+ G +  
Sbjct: 362 GLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFE 421

Query: 321 AIRVFEKMGERSVVS-WTSMIAGYAREGVFDGA 352
           A  +  K+   +  S W S++A     G  + A
Sbjct: 422 AYDLISKLPFNASASMWGSLLASCRTHGNLELA 454


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 343/595 (57%), Gaps = 15/595 (2%)

Query: 251 GLEVFKEMLNL----GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           G++  +E ++L    G       +  ++  CA   AL  GR +H +       +    +N
Sbjct: 21  GVDAIREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSN 80

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L+DMY KCG L  A RVF+ M  ++V SWT ++AG+ + G    AI+LF  M +EG  P
Sbjct: 81  LLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELP 140

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D  A+   + +C     L  G+++H       M S L  +NA+++MY KCGS+ +A +VF
Sbjct: 141 DRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVF 200

Query: 427 NQMPVKDIVSWNTMIGAL---------DLFVAMLQN--FEPDGVTMACILPACASLAALE 475
            +MP K+++SW+TMI A           LF  ++Q    E D +T   +L A  S+ ALE
Sbjct: 201 TRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALE 260

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
            G+ +H  I+  G+     V N +V+MY KCG    AR +FD +  K+++SW  M+A YG
Sbjct: 261 LGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYG 320

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
            +G   +A+A F+ M   G+ P++++F+++LY CSHSG   +    F  MR +  I P+ 
Sbjct: 321 QNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPRE 380

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
            H+ C++D+L R+G L EA   I+ MPV  DA +W SLLC C  H +   A + AE  F+
Sbjct: 381 VHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQ 440

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
            EP     Y++L+N+YA  +KW+E  K+R+++ + G++K  G SWIEI  +V+ FVAG S
Sbjct: 441 REPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDS 500

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
            HP   +I   L+RL  EM+ +GY P  +  + + +E EK+  L  HSEKLA+AFGI + 
Sbjct: 501 IHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIAST 560

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           P    + + KNLRVC DCH   KF+S    R I +RDSNRFHHF  G CSC  +W
Sbjct: 561 PPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 190/408 (46%), Gaps = 57/408 (13%)

Query: 148 LKEGRRVFNKIDNGKV----FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
           L+EGRR+   +D+G +    F+ NLL+  Y K G+  E                      
Sbjct: 57  LEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVE---------------------- 94

Query: 204 VLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
                           A ++FD +  ++V SW  +++G++ +G   + +++F  M   G 
Sbjct: 95  ----------------AKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGE 138

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             D   ++  +  C    AL  GR +H+ A       ++   N +++MY KCG +  A  
Sbjct: 139 LPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFA 198

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF +M E++V+SW++MIA + +  + D A+  F+ M +EG+E D     S+L A    G 
Sbjct: 199 VFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGA 258

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           LE+GK +H  I    + +S+ V N L++MY KCGS  DA  VF+ M  K++VSWN M+  
Sbjct: 259 LELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAA 318

Query: 443 ---------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRH--GIS 490
                    AL LF +M L+   P+ +T   IL  C+     +     H   +R   GI+
Sbjct: 319 YGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVS-HFVEMRQDFGIT 377

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
                   ++DM  + G L  A  L   +P   D + WT ++     H
Sbjct: 378 PREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTH 425



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 186/382 (48%), Gaps = 45/382 (11%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
            +++ CA  K+LE+G+++H  + +SG +     L + LV M+  CG L E +RVF+ + +
Sbjct: 46  QLIRRCAGAKALEEGRRIHRWM-DSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQH 104

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD----------------------- 197
             VF W +LM  + ++G   E++ LF +M   G   D                       
Sbjct: 105 KNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREI 164

Query: 198 -SYTFSCVLKCLAVVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
            S   SC +    V  N+          + +A  +F  + +++V+SW+ MI+ +  N +A
Sbjct: 165 HSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELA 224

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           ++ L  FK M   G  +D  T V+VL    + GAL  G+A+H   + A     I   NTL
Sbjct: 225 DEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTL 284

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           ++MY KCG  D A  VF+ M E++VVSW +M+A Y + G    A+ LF  M  EG+ P+ 
Sbjct: 285 VNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPND 344

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS------NALMDMYAKCGSMADA 422
               +IL+ C+  G     KD   +  E  M+    ++        L+DM  + G + +A
Sbjct: 345 ITFVTILYCCSHSGKF---KDAVSHFVE--MRQDFGITPREVHFGCLIDMLGRSGKLEEA 399

Query: 423 ESVFNQMPVK-DIVSWNTMIGA 443
           E +   MPV  D V W +++ A
Sbjct: 400 EELIQAMPVPADAVLWTSLLCA 421



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 13/202 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +++  I  FC+    ++A+    L   E  ++D  TY S+L     + +LE GK +H  I
Sbjct: 210 SWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRI 269

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +G+     V+G+ LV M+  CG   + R VF+ +    V  WN ++  Y + G  +E+
Sbjct: 270 VYAGLDTSI-VVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREA 328

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL------SDRDVVSWN 236
           L LF  M   G+  +  TF  +L C +   +S + KDA   F E+      + R+ V + 
Sbjct: 329 LALFDSMDLEGVRPNDITFVTILYCCS---HSGKFKDAVSHFVEMRQDFGITPRE-VHFG 384

Query: 237 CMISGYIANGVAEKGLEVFKEM 258
           C+I     +G  E+  E+ + M
Sbjct: 385 CLIDMLGRSGKLEEAEELIQAM 406


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/559 (40%), Positives = 329/559 (58%), Gaps = 11/559 (1%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G  +HA +LK           +LL +Y+KCG L  A RVF++M   S V WT++I  
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 146

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           Y   G    A+ + R     G+ PD +    +L ACA    L  G+ V    ++  +  S
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 206

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-L 451
           ++V+ A +D+Y KCG MA A  VF++M  KD V+W  M+G          ALDLF+AM  
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
           +  +PD   +A  L AC  L AL+ GR+    +       +  +  A++DMY KCG  V 
Sbjct: 267 EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 326

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A  +F  +  KD+I W  MI G GM G    A A    M ++G++ ++ +FI +L +C+H
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 386

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           +GL+ +G R+F+ M    +I P++EHY CMVDLLSR G L EA++ ++ MP+  +A I G
Sbjct: 387 TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILG 446

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           +LL GC+IH   +LAE V + +  LEP N+G YV+L+N+Y+   +WE+  KLR  +  +G
Sbjct: 447 ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKG 506

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
           ++K P CSW+E +GKV+ F  G  SHP + +I   L  L LEMK  GY P T   + + +
Sbjct: 507 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 566

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           + EKE  L  HSEKLA+AF +L    G+TIRVTKNLRVC DCH   K +S+   REI++R
Sbjct: 567 DEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVR 626

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           D+NRFH F+DG CSC  +W
Sbjct: 627 DNNRFHCFRDGSCSCNDYW 645



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 163/347 (46%), Gaps = 13/347 (3%)

Query: 187 KKMQSLGIAADSYTFSCVLKCL-AVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
           +++ +  +   S+T   VL  L ++      +  A ++FDE+     V W  +I+ Y+  
Sbjct: 91  EQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDA 150

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
           G   + + V +     G   D  T V VL+ CA    L  G  V   A +   ++ +   
Sbjct: 151 GDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVA 210

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
              +D+Y KCG++  A  VF+KM  +  V+W +M+ GYA  G    A+ LF  M  EG++
Sbjct: 211 TAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMK 270

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           PD YA+   L AC   G L++G+     +  ++   +  +  AL+DMYAKCGS  +A  V
Sbjct: 271 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVV 330

Query: 426 FNQMPVKDIVSWNTMI------GALDLFVAMLQNFEPDGV-----TMACILPACASLAAL 474
           F QM  KDI+ WN MI      G   +  A++   E  GV     T   +L +C     +
Sbjct: 331 FQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLI 390

Query: 475 ERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           + GR   H     + IS        +VD+  + G+L  A  L D +P
Sbjct: 391 QDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP 437



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 153/353 (43%), Gaps = 34/353 (9%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           L  G+++H+   +     +  VL S L+ ++  CG L   +RVF+++ +     W  L+ 
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTS-LLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALIT 145

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR---------------- 215
            Y   G+ +E++++ +   + G+  DS+T   VL   A + +                  
Sbjct: 146 AYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQ 205

Query: 216 ----------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
                            +  A ++FD++  +D V+W  M+ GY +NG   + L++F  M 
Sbjct: 206 SVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQ 265

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
             G   D   +   LS C   GAL  GR          F         L+DMY+KCG   
Sbjct: 266 AEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTV 325

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A  VF++M ++ ++ W +MI G    G    A  L   M + G++ +      +L +C 
Sbjct: 326 EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCT 385

Query: 380 CDGLLEIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
             GL++ G+   H+  K   +   +     ++D+ ++ G + +A  + + MP+
Sbjct: 386 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPM 438



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 125/301 (41%), Gaps = 36/301 (11%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T  + A I  + + G+L +A+ V  ++     + D+ T   +L  CA +  L  G+ V  
Sbjct: 137 TVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWR 196

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              + G V     + +  V ++V CG++ + R VF+K+ +     W  ++  Y+  G+ +
Sbjct: 197 AAEQEG-VAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPR 255

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------NSRRVKD--------------- 219
           E+L LF  MQ+ G+  D Y  +  L     +G       + R+ D               
Sbjct: 256 EALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALI 315

Query: 220 -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      A  +F ++  +D++ WN MI G    G  +    +  +M   G  ++  
Sbjct: 316 DMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDN 375

Query: 269 TMVTVLSGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T + +L  C + G +  GR   H        S  I     ++D+ S+ G L  A ++ + 
Sbjct: 376 TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDD 435

Query: 328 M 328
           M
Sbjct: 436 M 436


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/680 (37%), Positives = 378/680 (55%), Gaps = 56/680 (8%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  TY  +L++C+D   +  G++VH +  + G    D  +G+ L+  +  CG   +  
Sbjct: 134 KPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGF-DGDVFVGNTLLAFYGNCGLFGDAM 192

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL--GIAADSYTFSCVLKCLA- 209
           +VF+++       WN ++   S  G ++E+L  F+ M +   GI  D  T   VL   A 
Sbjct: 193 KVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAE 252

Query: 210 --------------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNC 237
                                           V G     K + K+FDE+ +R+V+SWN 
Sbjct: 253 TEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNA 312

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I+ +   G     L+VF+ M++ G   +  T+ ++L      G    G  VH F+LK  
Sbjct: 313 IITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMA 372

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
              ++  +N+L+DMY+K G    A  +F KMG R++VSW +MIA +AR  +   A+ L R
Sbjct: 373 IESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVR 432

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M  +G  P+    T++L ACA  G L +GK++H  I        L+VSNAL DMY+KCG
Sbjct: 433 QMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCG 492

Query: 418 SMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILP 466
            +  A++VFN + V+D VS+N +I           +L LF  M L    PD V+   ++ 
Sbjct: 493 CLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVS 551

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
           ACA+LA + +G+EIHG ++R        VAN+++D+Y +CG + LA  +F  I  KD+ S
Sbjct: 552 ACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVAS 611

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           W  MI GYGM G    AI  F  M++ G+E D VSF++VL ACSH GL+++G ++F MM 
Sbjct: 612 WNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMM- 670

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
            + NIEP   HYACMVDLL R G + EA   I  + + PD  IWG+LL  CRIH  ++L 
Sbjct: 671 CDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELG 730

Query: 647 EKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGK 706
              AEH+FEL+P + GYY+LL+N+YAEAE+W+E  K+RE +  RG KKNPGCSW+++   
Sbjct: 731 LWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSWVQVGDL 790

Query: 707 VNIFVAGGSSHPHAKKIESL 726
           V+ F+ G       +KI+SL
Sbjct: 791 VHAFLVG-------EKIDSL 803



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 193/363 (53%), Gaps = 15/363 (4%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           R    WN +I      GV + G   +  M+  G   D  T   VL  C++   +  GR V
Sbjct: 101 RSAFLWNTLIRANSIAGVFD-GFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREV 159

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H  A K  F  ++   NTLL  Y  CG    A++VF++M ER  VSW ++I   +  G +
Sbjct: 160 HGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFY 219

Query: 350 DGAIRLFRGMV--REGIEPDVYAITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVS 406
           + A+  FR MV  + GI+PD+  + S+L  CA      + + VH Y +K   +   + V 
Sbjct: 220 EEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVG 279

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFE 455
           NAL+D+Y KCGS   ++ VF+++  ++++SWN +I           ALD+F  M+ +   
Sbjct: 280 NALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMR 339

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           P+ VT++ +LP    L   + G E+HG+ L+  I +D  ++N+++DMY K G   +A ++
Sbjct: 340 PNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTI 399

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           F+ +  ++++SW  MIA +  +    +A+     M+  G  P+ V+F +VL AC+  G +
Sbjct: 400 FNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFL 459

Query: 576 DEG 578
           + G
Sbjct: 460 NVG 462



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 198/413 (47%), Gaps = 35/413 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  F   G    A++V  L   E  + ++ T  S+L +  +L   + G +VH   
Sbjct: 309 SWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFS 368

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +  I   D  + + L+ M+   G  +    +FNK+    +  WN ++  +++     E+
Sbjct: 369 LKMAIE-SDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEA 427

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG--------NSR--RVKDAHKLF--DELSD- 229
           + L ++MQ+ G   ++ TF+ VL   A +G        ++R  RV  +  LF  + L+D 
Sbjct: 428 VELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDM 487

Query: 230 ------------------RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                             RD VS+N +I GY     + + L +F EM  LG   D+ + +
Sbjct: 488 YSKCGCLNLAQNVFNISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFM 547

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
            V+S CAN   +  G+ +H   ++  F   +   N+LLD+Y++CG +D A +VF  +  +
Sbjct: 548 GVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNK 607

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            V SW +MI GY   G  D AI LF  M  +G+E D  +  ++L AC+  GL+E G+   
Sbjct: 608 DVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYF 667

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTMIGA 443
             + + +++ +      ++D+  + G M +A  +   +  + D   W  ++GA
Sbjct: 668 KMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGA 720


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/607 (36%), Positives = 345/607 (56%), Gaps = 42/607 (6%)

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG--------- 316
           D +    +L  C   G+L  G+ VH+  + +  SK+   +N LL+ YSK G         
Sbjct: 61  DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLF 120

Query: 317 ----------------------DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
                                 DL+ A ++F++M ER++ +W +MIAG  +      A+ 
Sbjct: 121 SNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALS 180

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LF+ M   G  PD + + S+L  CA    L  G++VH  + +   + S  V ++L  MY 
Sbjct: 181 LFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYI 240

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTMAC 463
           K GS++D E +   MP++ +V+WNT+I            L+ +  M +  F PD +T   
Sbjct: 241 KSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVS 300

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           +L AC+ LA L +G++IH  +++ G S+   V ++++ MY + G L  +   F      D
Sbjct: 301 VLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFD 360

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           ++ W+ MIA YG HG G +A+  F+ M    +E +EV+F+S+LYACSHSGL ++G  +F+
Sbjct: 361 VVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFD 420

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
           +M  +  ++P++EHY C+VDLL R G L EA   I  MPV PD  IW +LL  C++H E 
Sbjct: 421 LMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEA 480

Query: 644 KLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
           ++AE+++E + +L+P +   YVLL+N++A A  W  V ++R+ +  R ++K PG SW+E+
Sbjct: 481 EMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLEL 540

Query: 704 KGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHS 763
           K  V+ F  G  SHP   +I+  LK L  E+K+ GY P+    L + D  EKE  L  HS
Sbjct: 541 KNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHS 600

Query: 764 EKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGR 823
           EK A+AF ++N      IRV KNLRVC DCH   K +S+   REI++RD++RFHHFKDG 
Sbjct: 601 EKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGE 660

Query: 824 CSCRGFW 830
           CSC  +W
Sbjct: 661 CSCGNYW 667



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 235/505 (46%), Gaps = 56/505 (11%)

Query: 48  INPISASISKTLVCKTKNYNA--EIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQL 105
           +NP+ +   ++L  K  +  +  E    C  G +++A +   S   S  D   +  +LQ 
Sbjct: 14  LNPLYSFTVRSLSMKISSSASLQEFTSLCNDGRIKQAYDTFTSEIWS--DPSLFSHLLQS 71

Query: 106 CADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI 165
           C  L SL  GK+VHS+I  SG        GSK                          FI
Sbjct: 72  CIKLGSLFGGKQVHSLIITSG--------GSK------------------------DKFI 99

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
            N L++ YSK G FK SL LF  M    +     +F+ ++     +G+   ++ A KLFD
Sbjct: 100 SNHLLNFYSKLGQFKSSLVLFSNMPRRNV----MSFNILINGYLQLGD---LESAQKLFD 152

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
           E+S+R++ +WN MI+G       ++ L +FKEM  LGF  D  T+ +VL GCA   +L+ 
Sbjct: 153 EMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLA 212

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ VHA  LK  F       ++L  MY K G L    ++ + M  R+VV+W ++IAG A+
Sbjct: 213 GQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQ 272

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G  +  +  +  M   G  PD     S+L AC+    L  G+ +H  + +    S L V
Sbjct: 273 NGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAV 332

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NF 454
            ++L+ MY++ G + D+   F      D+V W++MI           AL+LF  M     
Sbjct: 333 VSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKM 392

Query: 455 EPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLAR 513
           E + VT   +L AC+     E+G E    ++ ++ +         +VD+  + G L  A 
Sbjct: 393 EANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAE 452

Query: 514 SLFDMIPAK-DLISWTIMIAGYGMH 537
            +   +P + D I W  ++A   +H
Sbjct: 453 GMIRSMPVQPDGIIWKTLLAACKLH 477



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 145/328 (44%), Gaps = 44/328 (13%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T  S+L+ CA L+SL  G++VH+ + + G  +   V+GS L  M++  G L +G ++
Sbjct: 193 DEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSS-VVGSSLAHMYIKSGSLSDGEKL 251

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVV 211
              +    V  WN L+   ++ G  +E L  +  M+  G   D  TF  VL     LA +
Sbjct: 252 IKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATL 311

Query: 212 GNSRRV-----------------------------KDAHKLFDELSDRDVVSWNCMISGY 242
           G  +++                             +D+ K F +  + DVV W+ MI+ Y
Sbjct: 312 GQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAY 371

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC-----GALMFGRAVHAFALKAC 297
             +G  E+ LE+F +M +L    +  T +++L  C++      G   F   V  + LK  
Sbjct: 372 GFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKP- 430

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLF 356
               I     ++D+  + G L+ A  +   M  +   + W +++A        + A R+ 
Sbjct: 431 ---RIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERIS 487

Query: 357 RGMVR-EGIEPDVYAITSILHACACDGL 383
             +++ + ++   Y + S +HA A + L
Sbjct: 488 EEIIKLDPLDAASYVLLSNIHASARNWL 515


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/580 (39%), Positives = 348/580 (60%), Gaps = 12/580 (2%)

Query: 263 FNVDLATMV-TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           FN    + V  +L  CA    L+ G+A HA  L      ++  +N L++MYSKCG +D A
Sbjct: 59  FNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFA 118

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            +VF++M  RS+VSW +MI    + G  + A+ L   M REG     + I+S+L ACA  
Sbjct: 119 RQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAK 178

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             L   + +H +  +  M  +++V+ AL+D+YAKCG M DA  VF  MP + +V+W++M 
Sbjct: 179 CALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMA 238

Query: 442 G----------ALDLF-VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      AL LF  A     + D   M+ ++ ACA LAA+  G++++  + + G  
Sbjct: 239 AGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFC 298

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
           ++  VA++++DMY KCG +  +  +F  +  ++++ W  MI+G   H    + +  F  M
Sbjct: 299 SNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKM 358

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
           +Q G+ P++V+F+SVL AC H GLV +G ++F++M  E ++ P + HY+CMVD LSR G 
Sbjct: 359 QQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQ 418

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
           + EAY  I  +P    A++WGSLL  CR H  ++LAE  A+ +F++EP N+G Y+LL+N+
Sbjct: 419 IFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNM 478

Query: 671 YAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL 730
           YA   KW+EV K+R+ +    +KK  G SWIEIK KV++F+ G  +HP   +I S L  +
Sbjct: 479 YAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEV 538

Query: 731 RLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVC 790
             E+++ GY  +T++ L    E  K+  L  HSEKLA   G+L LP    IR+ KNLR+C
Sbjct: 539 MDELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRIC 598

Query: 791 GDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           GDCH   K  SK   R++++RD+NRFHHFK+G CSC  FW
Sbjct: 599 GDCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 190/362 (52%), Gaps = 20/362 (5%)

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
           +G+  D  T + ++   +  G+   V  A ++FDE+  R +VSWN MI     NG   + 
Sbjct: 93  MGLKTDLLTSNILINMYSKCGS---VDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEA 149

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           L++  +M   G      T+ +VL  CA   AL   + +HAFA+KA     +     LLD+
Sbjct: 150 LDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDV 209

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+KCG +  A+ VFE M +RSVV+W+SM AGY +  +++ A+ LFR     G++ D + +
Sbjct: 210 YAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLM 269

Query: 372 TSILHACACDGLLEI--GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           +S++  CAC GL  +  GK ++  + ++   S+++V+++L+DMYAKCG + ++  VF  +
Sbjct: 270 SSVI--CACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDV 327

Query: 430 PVKDIVSWNTMIGALD----------LFVAMLQ-NFEPDGVTMACILPACASLAALERGR 478
             +++V WN MI  L           LF  M Q    P+ VT   +L AC  +  + +G+
Sbjct: 328 EKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQ 387

Query: 479 EIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGM 536
           +    + + H ++ +    + +VD   + G +  A  L   +P     S W  ++A    
Sbjct: 388 KYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRT 447

Query: 537 HG 538
           HG
Sbjct: 448 HG 449



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 188/377 (49%), Gaps = 37/377 (9%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK-LVFMFVTCGDLKEGRRVFNKIDN 160
           IL+LCA  K L  GK  H+ I   G+  D  +L S  L+ M+  CG +   R+VF+++ +
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTD--LLTSNILINMYSKCGSVDFARQVFDEMPS 127

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-----KC-------- 207
             +  WN ++   ++ G   E+L L  +MQ  G     +T S VL     KC        
Sbjct: 128 RSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLL 187

Query: 208 -------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                              L V      +KDA  +F+ + DR VV+W+ M +GY+ N + 
Sbjct: 188 HAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMY 247

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           E+ L +F++    G   D   M +V+  CA   A++ G+ ++A   K+ F   I   ++L
Sbjct: 248 EQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSL 307

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           +DMY+KCG ++ + +VF  + +R+VV W +MI+G +R       + LF  M + G+ P+ 
Sbjct: 308 IDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPND 367

Query: 369 YAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
               S+L AC   GL+  G+   D + KE+ +  +++  + ++D  ++ G + +A  + +
Sbjct: 368 VTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427

Query: 428 QMPVKDIVS-WNTMIGA 443
           ++P     S W +++ +
Sbjct: 428 KLPFNASASMWGSLLAS 444



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 19/249 (7%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D     S++  CA L ++ +GK++++++ +SG    +  + S L+ M+  CG ++E  
Sbjct: 263 KHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFC-SNIFVASSLIDMYAKCGGIEESY 321

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           +VF  ++   V +WN ++   S+     E + LF+KMQ +G++ +  TF  V   L+  G
Sbjct: 322 KVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSV---LSACG 378

Query: 213 NSRRVKDAHKLFDELSDR-----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           +   V+   K FD ++       +V  ++CM+      G   +  E +  +  L FN   
Sbjct: 379 HMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAG---QIFEAYDLISKLPFNASA 435

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI--SFNNTLL-DMYSKCGDLDGAIRV 324
           +   ++L+ C   G L         A K  F  E   S N  LL +MY+  G  D   ++
Sbjct: 436 SMWGSLLASCRTHGNLELAEV----AAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKM 491

Query: 325 FEKMGERSV 333
            + + E  V
Sbjct: 492 RKLLKESDV 500



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/333 (21%), Positives = 150/333 (45%), Gaps = 41/333 (12%)

Query: 56  SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLE 113
           S++LV    ++N  IG   + G   +A+++L   ++  +     T  S+L  CA   +L 
Sbjct: 127 SRSLV----SWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALS 182

Query: 114 DGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
           + + +H+   ++ + ++  V  + L+ ++  CG +K+   VF  + +  V  W+ +   Y
Sbjct: 183 ECQLLHAFAIKAAMDLNVFV-ATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGY 241

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFS---CVLKCLAVVGNSRR-------------- 216
            +   ++++L LF+K    G+  D +  S   C    LA +   ++              
Sbjct: 242 VQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNI 301

Query: 217 ---------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                          +++++K+F ++  R+VV WN MISG   +  + + + +F++M  +
Sbjct: 302 FVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQM 361

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDG 320
           G + +  T V+VLS C + G +  G+       K    +  +   + ++D  S+ G +  
Sbjct: 362 GLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFE 421

Query: 321 AIRVFEKMGERSVVS-WTSMIAGYAREGVFDGA 352
           A  +  K+   +  S W S++A     G  + A
Sbjct: 422 AYDLISKLPFNASASMWGSLLASCRTHGNLELA 454


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/611 (37%), Positives = 345/611 (56%), Gaps = 19/611 (3%)

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           WN  +          + L ++ +ML  G   +  T    L  CA     + G   H    
Sbjct: 17  WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK--MGERSVVSWTSMIAGYAREGVFDGA 352
           K     E      L+ MY K   +D A +VFE+     +  V + ++++GY        A
Sbjct: 77  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
           + LFR M  EG+  +   +  ++ AC     LE+G  +H    +    S + V N  + M
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTM 461
           Y KCGS+  A+ +F++MPVK ++SWN M+            L+L+  M +    PD VT+
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 256

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
             +L +CA+L A   G E+   I   G +++  + NA+++MY +CG L  A+++FD +P 
Sbjct: 257 VGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 316

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           + L+SWT +I GYGMHG G  A+  F +M ++GIEPD  +F+ VL ACSH+GL D+G  +
Sbjct: 317 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 376

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           F MM+    +EP  EHY+CMVDLL R G L EA   IE MP+ PD  +WG+LL  C+IH 
Sbjct: 377 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 436

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
            V+LAE   E V ELEP+N GYYVLL+N+Y+ A   + V ++R  +  + LKK+PGCS++
Sbjct: 437 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 496

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE--VAL 759
           E+KG+V+ F+ G  +H  + +I  +L+ L   + +E   P+      N +E  K+    +
Sbjct: 497 ELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD----NREESNKDGFTRV 552

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
             HSEKLA+AFG+LN   G  + + KNLR+C DCH   K +SK   R++ +RD+ RFHHF
Sbjct: 553 GVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHF 612

Query: 820 KDGRCSCRGFW 830
           ++G CSC+ +W
Sbjct: 613 RNGSCSCKDYW 623



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 223/448 (49%), Gaps = 49/448 (10%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-----SCVLKCLAVVGNSRR---- 216
           WN  + E +K   F ++L L+ +M   G   +++TF     SC    L ++G+       
Sbjct: 17  WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76

Query: 217 -----------------------VKDAHKLFDE--LSDRDVVSWNCMISGYIANGVAEKG 251
                                  V +A K+F+E   S +  V +N ++SGY++N    + 
Sbjct: 77  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           + +F++M   G  V+  T++ ++  C +   L  G ++H   LK  F  ++S  N  + M
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y KCG ++ A ++F++M  + ++SW +M++GYA+ G+    + L+R M   G+ PD   +
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 256

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
             +L +CA  G   +G +V   I+ +   S+ +++NAL++MYA+CG++  A++VF+ MP 
Sbjct: 257 VGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 316

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI 480
           + +VSW  +IG          A+ LF  M+++  EPDG    C+L AC+     ++G E 
Sbjct: 317 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 376

Query: 481 HGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
              + R + +       + +VD+  + G L  A++L + +P K D   W  ++    +H 
Sbjct: 377 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 436

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVL 566
               A   F   R   +EP+ + +  +L
Sbjct: 437 NVELAELAFE--RVIELEPENIGYYVLL 462



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 33/226 (14%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           + E   +++ T   ++  C    +LE G  +H    + G   D  V+    + M++ CG 
Sbjct: 144 NEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNC-FITMYMKCGS 202

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           +   +++F+++    +  WN ++  Y++ G     L L++ M   G+  D  T   VL  
Sbjct: 203 VNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSS 262

Query: 208 LAVVGNSR--------------------------------RVKDAHKLFDELSDRDVVSW 235
            A +G                                    +  A  +FD + +R +VSW
Sbjct: 263 CANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSW 322

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
             +I GY  +G  E  +++FKEM+  G   D    V VLS C++ G
Sbjct: 323 TAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAG 368



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 3/150 (2%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  + + G     +E+  + + + +  D  T   +L  CA+L +   G +V   I
Sbjct: 220 SWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKI 279

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG    +  L + L+ M+  CG+L + + VF+ +    +  W  ++  Y   G+ + +
Sbjct: 280 QASGFT-SNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIA 338

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           + LFK+M   GI  D   F CVL   +  G
Sbjct: 339 VQLFKEMIRSGIEPDGTAFVCVLSACSHAG 368


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/690 (34%), Positives = 380/690 (55%), Gaps = 48/690 (6%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           + ++LQ   + +SL+ GK +H+ I +S        + + LV ++  C  L+E + VF +I
Sbjct: 10  FTALLQYTHN-RSLQKGKALHAQIIKSSSSCV--YIANSLVNLYAKCQRLREAKFVFERI 66

Query: 159 DNGKVFIWNLLMHEYSKTGNFKES--LYLFKKMQSLGIAADSYTFSCVLKCLAV------ 210
            N  V  WN +++ YS+ G    S  + LF++M++   A +++TF+ V    +       
Sbjct: 67  QNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAG 126

Query: 211 ------------------VGNSRR--------VKDAHKLFDELSDRDVVSWNCMISGYIA 244
                             VG+S            +A K+FD + +R+ VSW  MISGY +
Sbjct: 127 GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYAS 186

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
             +A + L +F+ M       +     +VLS       +  G+ +H  A+K      +S 
Sbjct: 187 QKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSV 246

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            N L+ MY+KCG LD A++ FE   +++ ++W++MI GYA+ G  D A++LF  M   GI
Sbjct: 247 GNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGI 306

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
            P  +    +++AC+  G    GK VHDY+ +   +S +YV  AL+DMYAKC S+ DA  
Sbjct: 307 RPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARK 366

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAA 473
            F+ +   DIV W +MIG          AL L+  M ++   P+ +TMA +L AC+SLAA
Sbjct: 367 GFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAA 426

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           LE+G++IH   +++G   +  + +A+  MY KCG L     +F  +PA+D+ISW  MI+G
Sbjct: 427 LEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISG 486

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
              +G G +A+  F +M+  G +PD V+F+++L ACSH GLV+ GW +F MM  E  ++P
Sbjct: 487 LSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDP 546

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
           ++EHYACMVD+LSR G L EA  F E   +     +W  +L  CR +   +L     E +
Sbjct: 547 RVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKL 606

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
            EL    +  YVLL+++Y+   +WE+V+++R  +  RG+ K PGCSWIE+K  V++FV  
Sbjct: 607 MELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVK 666

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
              HP    I   L++L  +MK EGY P T
Sbjct: 667 DQMHPQIGDIHVELRQLSKQMKDEGYEPAT 696


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/601 (36%), Positives = 362/601 (60%), Gaps = 34/601 (5%)

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN---- 305
           + ++    + + G   D AT   ++  C +       RAVH   L     + + FN    
Sbjct: 44  RAMKAMDSLQSHGLWADSATYSELIKCCIS------NRAVHEGNL---ICRHLYFNGHRP 94

Query: 306 -----NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                N L++MY K   L+ A ++F++M +R+V+SWT+MI+ Y++  +   A+ L   M+
Sbjct: 95  MMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML 154

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           R+ + P+VY  +S+L +C  +G+ ++ + +H  I +  ++S ++V +AL+D++AK G   
Sbjct: 155 RDNVRPNVYTYSSVLRSC--NGMSDV-RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPE 211

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACA 469
           DA SVF++M   D + WN++IG          AL+LF  M +  F  +  T+  +L AC 
Sbjct: 212 DALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 271

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            LA LE G + H +I+++    D  + NA+VDMY KCG L  A  +F+ +  +D+I+W+ 
Sbjct: 272 GLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           MI+G   +G+  +A+  F  M+ +G +P+ ++ + VL+ACSH+GL+++GW +F  M+   
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            I+P  EHY CM+DLL + G L +A + +  M   PDA  W +LL  CR+   + LAE  
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYA 449

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           A+ V  L+P++ G Y LL+N+YA ++KW+ V+++R ++  RG+KK PGCSWIE+  +++ 
Sbjct: 450 AKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHA 509

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F+ G +SHP   ++   L +L   +   GY P+T + L + +  + E +L  HSEKLA+A
Sbjct: 510 FIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALA 569

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           FG++ LP  + IR+ KNLR+CGDCH   K  SK   R IV+RD  R+HHF+DG+CSC  +
Sbjct: 570 FGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDY 629

Query: 830 W 830
           W
Sbjct: 630 W 630



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 205/422 (48%), Gaps = 62/422 (14%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICES 125
           +E  R C   +L +AM+ + S +   +  D+ TY  +++ C   +++ +G    ++IC  
Sbjct: 31  SEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEG----NLICRH 86

Query: 126 GIVIDDG-----VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
             +  +G      L + L+ M+V    L +  ++F+++    V  W  ++  YSK    +
Sbjct: 87  --LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQ 144

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV----------------------- 217
           ++L L   M    +  + YT+S VL+    + + R +                       
Sbjct: 145 KALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVF 204

Query: 218 ------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                 +DA  +FDE+   D + WN +I G+  N  ++  LE+FK M   GF  + AT+ 
Sbjct: 205 AKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +VL  C     L  G   H   +K  + +++  NN L+DMY KCG L+ A+RVF +M ER
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG---- 387
            V++W++MI+G A+ G    A++LF  M   G +P+   I  +L AC+  GLLE G    
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 382

Query: 388 ---KDVH--DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
              K ++  D ++E+           ++D+  K G + DA  + N+M  + D V+W T++
Sbjct: 383 RSMKKLYGIDPVREH--------YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434

Query: 442 GA 443
           GA
Sbjct: 435 GA 436



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 201/419 (47%), Gaps = 61/419 (14%)

Query: 167 NLLMHEYSK---TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------------- 209
            LL+ E+++     +   ++     +QS G+ ADS T+S ++KC                
Sbjct: 27  TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86

Query: 210 VVGNSRR------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
           +  N  R                  + DAH+LFD++  R+V+SW  MIS Y    + +K 
Sbjct: 87  LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           LE+   ML      ++ T  +VL  C     +   R +H   +K     ++   + L+D+
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDV 203

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           ++K G+ + A+ VF++M     + W S+I G+A+    D A+ LF+ M R G   +   +
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
           TS+L AC    LLE+G   H +I + D    L ++NAL+DMY KCGS+ DA  VFNQM  
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKE 321

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI 480
           +D+++W+TMI           AL LF  M  +  +P+ +T+  +L AC+    LE G   
Sbjct: 322 RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG--- 378

Query: 481 HGYILR-----HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
             Y  R     +GI   R     ++D+  K G L  A  L + +  + D ++W  ++  
Sbjct: 379 -WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 152/316 (48%), Gaps = 50/316 (15%)

Query: 80  EKAME--VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
           +KA+E  VL   +  + +  TY S+L+ C     + D + +H  I + G+   D  + S 
Sbjct: 144 QKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLE-SDVFVRSA 199

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           L+ +F   G+ ++   VF+++  G   +WN ++  +++      +L LFK+M+  G  A+
Sbjct: 200 LIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 259

Query: 198 SYTFSCVLK-----CLAVVGNSRRV-------------------------KDAHKLFDEL 227
             T + VL+      L  +G    V                         +DA ++F+++
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQM 319

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
            +RDV++W+ MISG   NG +++ L++F+ M + G   +  T+V VL  C++ G L  G 
Sbjct: 320 KERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG- 378

Query: 288 AVHAFALKACFSKEISFNN--TLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYA 344
             +  ++K  +  +    +   ++D+  K G LD A+++  +M  E   V+W +++    
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL---- 434

Query: 345 REGVFDGAIRLFRGMV 360
                 GA R+ R MV
Sbjct: 435 ------GACRVQRNMV 444



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 5/142 (3%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ IG F +    + A+E+    +++    +  T  S+L+ C  L  LE G + H  I 
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +      D +L + LV M+  CG L++  RVFN++    V  W+ ++   ++ G  +E+L
Sbjct: 288 KYD---QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344

Query: 184 YLFKKMQSLGIAADSYTFSCVL 205
            LF++M+S G   +  T   VL
Sbjct: 345 KLFERMKSSGTKPNYITIVGVL 366


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/542 (40%), Positives = 327/542 (60%), Gaps = 43/542 (7%)

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           +V SW S+IA  AR G    A+R F  M +  ++P+       + +C+    L  G+  H
Sbjct: 40  NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
                   +  L+VS+AL+DMY+KCG + DA ++F+++  ++IVSW +MI          
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159

Query: 443 --------------------------------ALDLFVAMLQNFEPD--GVTMACILPAC 468
                                           ++++F  M+++ E +   VT++ +L AC
Sbjct: 160 RALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 219

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A   +   G+ IH  +++ G+ ++  V  +I+DMY KCG + +AR  FD +  K++ SW+
Sbjct: 220 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWS 279

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            M+AGYGMHG   +A+  F +M  AG++P+ ++F+SVL ACSH+GL++EGW +F  M +E
Sbjct: 280 AMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHE 339

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
            ++EP +EHY CMVDLL R G L EA+  I+ M + PD  +WG+LL  CR+H  V L E 
Sbjct: 340 FDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEI 399

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            A  +FEL+P N GYYVLL+N+YA+A +WE+V+++R  +   GL K PG S ++IKG+V+
Sbjct: 400 SARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVH 459

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
           +F+ G   HP  +KI   L++L ++++  GY P     L +    EKE+ L  HSEKLA+
Sbjct: 460 VFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAV 519

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           AFGI+N   G TI + KNLRVCGDCH   KF+SK   REIV+RDS RFHHF+DG CSC  
Sbjct: 520 AFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGD 579

Query: 829 FW 830
           +W
Sbjct: 580 YW 581



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 189/402 (47%), Gaps = 46/402 (11%)

Query: 49  NPISASISKTLVCKTK--NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQ 104
           NP   ++    V KT   ++N+ I      G+  +A+    S  K   K +  T+   ++
Sbjct: 25  NPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIK 84

Query: 105 LCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVF 164
            C+ L  L  G++ H      G    D  + S LV M+  CG+L++ R +F++I +  + 
Sbjct: 85  SCSALLDLHSGRQAHQQALIFGFE-PDLFVSSALVDMYSKCGELRDARTLFDEISHRNIV 143

Query: 165 IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLF 224
            W  ++  Y +  +   +L                                      ++F
Sbjct: 144 SWTSMITGYVQNDDAHRAL--------------------------------------RVF 165

Query: 225 DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGAL 283
           D +++RDV+SWN +I+ Y  NG++ + +E+F  M+  G  N +  T+  VL  CA+ G+ 
Sbjct: 166 DGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQ 225

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G+ +H   +K      +    +++DMY KCG ++ A + F++M E++V SW++M+AGY
Sbjct: 226 RLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGY 285

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSS 402
              G    A+ +F  M   G++P+     S+L AC+  GLLE G      +  E D++  
Sbjct: 286 GMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPG 345

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           +     ++D+  + G + +A  +   M ++ D V W  ++GA
Sbjct: 346 VEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA 387



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 176/366 (48%), Gaps = 56/366 (15%)

Query: 223 LFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           LF++  D+ +V SWN +I+    +G + + L  F  M  L    + +T    +  C+   
Sbjct: 31  LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG--------------------- 320
            L  GR  H  AL   F  ++  ++ L+DMYSKCG+L                       
Sbjct: 91  DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150

Query: 321 ----------AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVY 369
                     A+RVF+ M ER V+SW S+IA YA+ G+   ++ +F  MV++G I  +  
Sbjct: 151 GYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAV 210

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            ++++L ACA  G   +GK +HD + +  ++S+++V  +++DMY KCG +  A   F++M
Sbjct: 211 TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 270

Query: 430 PVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGR 478
             K++ SW+ M+           AL++F  M +   +P+ +T   +L AC+    LE G 
Sbjct: 271 REKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG- 329

Query: 479 EIHGY-ILRHGISADRNVAN--AIVDMYVKCGVLVLARSLFDMIPA----KDLISWTIMI 531
             H +  + H    +  V +   +VD+  + G L   +  FD+I       D + W  ++
Sbjct: 330 -WHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYL---KEAFDLIKGMKLRPDFVVWGALL 385

Query: 532 AGYGMH 537
               MH
Sbjct: 386 GACRMH 391



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 16/174 (9%)

Query: 424 SVFNQMPVK-DIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASL 471
           ++FN+   K ++ SWN++I           AL  F +M + + +P+  T  C + +C++L
Sbjct: 30  TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 89

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
             L  GR+ H   L  G   D  V++A+VDMY KCG L  AR+LFD I  ++++SWT MI
Sbjct: 90  LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 149

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
            GY  +     A+  F+ M     E D +S+ S++   + +G+  E    F+ M
Sbjct: 150 TGYVQNDDAHRALRVFDGM----AERDVISWNSIIAVYAQNGMSTESMEIFHRM 199


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/688 (34%), Positives = 387/688 (56%), Gaps = 44/688 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D+ T+  +++ CA L ++  G+ VH      G+   D  +GS L+ M+   G L + R+V
Sbjct: 145 DSHTFPYVVKSCAALGAIALGRLVHRTARTLGL-DGDMFVGSALIKMYANGGLLWDARQV 203

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV---- 210
           F+ +      +WN++M  Y K G+   ++ LF  M++ G   +  T +C L   A     
Sbjct: 204 FDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDL 263

Query: 211 --------------------VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGY 242
                               V N+        + + D  KLF  +   D+V+WN MISG 
Sbjct: 264 FFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGC 323

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           + NG  ++ L +F +M   G   D  T+V++L    +      G+ +H + ++ C   ++
Sbjct: 324 VQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDV 383

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              + L+D+Y KC  +  A  V++      VV  ++MI+GY   G+   A+++FR ++ +
Sbjct: 384 FLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQ 443

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           GI P+  AI S+L ACA    +++G+++H Y  +N  +   YV +ALMDMYAKCG +  +
Sbjct: 444 GIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLS 503

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
             +F+++  KD V+WN+MI           AL+LF  M ++  +   VT++ +L ACASL
Sbjct: 504 HYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASL 563

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            A+  G+EIHG +++  I AD    +A++DMY KCG L  A  +F+ +P K+ +SW  +I
Sbjct: 564 PAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSII 623

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           A YG +G   ++++    M++ G + D V+F++++ AC+H+G V EG R F  M  E  I
Sbjct: 624 ASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQI 683

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P++EH+ACMVDL SR G L +A   I  MP  PDA IWG+LL  CR+H  V+LAE  ++
Sbjct: 684 APRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQ 743

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            +F+L+P N+GYYVL++N+ A A +W+ V K+R  +    ++K PG SW+++    ++FV
Sbjct: 744 ELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFV 803

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGY 739
           A   SHP ++ I   LK + LE++ EG+
Sbjct: 804 AADKSHPDSEDIYMSLKSILLELREEGH 831



 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 182/634 (28%), Positives = 307/634 (48%), Gaps = 52/634 (8%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           ++L+ C     L  G +VH     +G+   D  L ++LV M+V     ++   VF+ +  
Sbjct: 44  AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103

Query: 161 GK---VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA--ADSYTFSCVLKCLAVVG--- 212
           G       WN L+   +  G+++ +L  + KM +   A   DS+TF  V+K  A +G   
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163

Query: 213 -----------------------------NSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                        N   + DA ++FD +++RD V WN M+ GY+
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
             G     +E+F +M   G   + AT+   LS  A    L FG  +H  A+K     E++
Sbjct: 224 KAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVA 283

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             NTL+ MY+KC  LD   ++F  M    +V+W  MI+G  + G  D A+ LF  M + G
Sbjct: 284 VANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSG 343

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           I PD   + S+L A         GK++H YI  N +   +++ +AL+D+Y KC ++  A+
Sbjct: 344 IRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQ 403

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLA 472
           SV++     D+V  +TMI           A+ +F  +L Q   P+ V +A +LPACAS+A
Sbjct: 404 SVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMA 463

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           A++ G+E+H Y L++       V +A++DMY KCG L L+  +F  I AKD ++W  MI+
Sbjct: 464 AMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMIS 523

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
            +  +G   +A+  F +M   G++   V+  SVL AC+    +  G     ++  +  I 
Sbjct: 524 SFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVV-IKGPIR 582

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
             L   + ++D+  + GNL  A+R  E MP   + + W S++     +  VK +  +  H
Sbjct: 583 ADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIASYGAYGLVKESVSLLRH 641

Query: 653 VFE--LEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           + E   + D+  +  L++      +  E ++  R
Sbjct: 642 MQEEGFKADHVTFLALVSACAHAGQVQEGLRLFR 675



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 159/326 (48%), Gaps = 17/326 (5%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACF-SKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           ++ VL GC +   L  G  VH  A+ A   + + +    L+ MY        A+ VF  +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 329 GERSV---VSWTSMIAGYAREGVFDGAIRLFRGMVRE--GIEPDVYAITSILHACACDGL 383
              +    + W  +I G    G +  A+  +  M        PD +    ++ +CA  G 
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-- 441
           + +G+ VH   +   +   ++V +AL+ MYA  G + DA  VF+ M  +D V WN M+  
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 442 --------GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    A++LF  M     EP+  T+AC L   A+ + L  G ++H   +++G+ ++
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             VAN +V MY KC  L     LF ++P  DL++W  MI+G   +GF   A+  F DM++
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEG 578
           +GI PD V+ +S+L A +     ++G
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQG 367



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 27/288 (9%)

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSS-LYVSNALMDMYAKCGSMADAESVFNQM 429
           + ++L  C     L +G  VH       + ++   +   L+ MY       DA +VF+ +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 430 P---VKDIVSWN------TMIG----ALDLFVAMLQNFE---PDGVTMACILPACASLAA 473
           P       + WN      TM G    AL  ++ M  +     PD  T   ++ +CA+L A
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           +  GR +H      G+  D  V +A++ MY   G+L  AR +FD +  +D + W +M+ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           Y   G    A+  F DMR +G EP+  +      AC  S    E   FF +  +   ++ 
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATL-----ACFLSVSATESDLFFGVQLHTLAVKY 276

Query: 594 KLEHYAC----MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
            LE        +V + ++   L + ++   +MP   D   W  ++ GC
Sbjct: 277 GLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP-RDDLVTWNGMISGC 323



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 14/220 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N+ I  F + G  E+A+ +      E  K    T  S+L  CA L ++  GK++H ++
Sbjct: 517 TWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVV 576

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G +  D    S L+ M+  CG+L+   RVF  +       WN ++  Y   G  KES
Sbjct: 577 IK-GPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKES 635

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNC 237
           + L + MQ  G  AD  TF  ++   A  G   +V++  +LF  +++   ++     + C
Sbjct: 636 VSLLRHMQEEGFKADHVTFLALVSACAHAG---QVQEGLRLFRCMTEEYQIAPRMEHFAC 692

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           M+  Y   G  +K +E+   ++++ F  D      +L  C
Sbjct: 693 MVDLYSRAGKLDKAMEL---IVDMPFKPDAGIWGALLHAC 729


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/624 (36%), Positives = 351/624 (56%), Gaps = 48/624 (7%)

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
           ++ + ++G  +D  + + +L   +   AL  G  +H  A K     +       +DMY+ 
Sbjct: 99  YQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYAS 158

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
           CG ++ A  VF++M  R VV+W +MI  Y R G+ D A +LF  M    + PD   + +I
Sbjct: 159 CGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNI 218

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQ-------------------------------SSL 403
           + AC   G +   + +++++ END++                                +L
Sbjct: 219 VSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNL 278

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNFE----- 455
           +VS A++  Y+KCG + DA+ +F+Q   KD+V W TMI A    D     L+ FE     
Sbjct: 279 FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS 338

Query: 456 ---PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
              PD V+M  ++ ACA+L  L++ + +H  I  +G+ ++ ++ NA+++MY KCG L   
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           R +F+ +P ++++SW+ MI    MHG   DA++ F  M+Q  +EP+EV+F+ VLY CSHS
Sbjct: 399 RDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHS 458

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           GLV+EG + F  M  E NI PKLEHY CMVDL  R   L EA   IE MPVA +  IWGS
Sbjct: 459 GLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGS 518

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           L+  CRIH E++L +  A+ + ELEPD+ G  VL++N+YA  ++WE+V+ +R  +  + +
Sbjct: 519 LMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNV 578

Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 752
            K  G S I+  GK + F+ G   H  + +I + L  +  ++K  GY P     L++ +E
Sbjct: 579 FKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEE 638

Query: 753 MEKEVALCGHSEKLAMAFGILNLPAGQ------TIRVTKNLRVCGDCHEMAKFMSKTARR 806
            EK+  +  HSEKLA+ FG++N    +       IR+ KNLRVC DCH   K +SK   R
Sbjct: 639 EEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYER 698

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           EI++RD  RFH +K+G CSCR +W
Sbjct: 699 EIIVRDRTRFHCYKNGLCSCRDYW 722



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  +  S++  CA+L  L+  K VHS I  +G+  +  +  + L+ M+  CG L   R
Sbjct: 341 KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSI-NNALINMYAKCGGLDATR 399

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            VF K+    V  W+ +++  S  G   ++L LF +M+   +  +  TF  VL   +   
Sbjct: 400 DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCS--- 456

Query: 213 NSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           +S  V++  K+F  ++D   ++     + CM+  +    +  + LEV + M       ++
Sbjct: 457 HSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM---PVASNV 513

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
               +++S C   G L  G+    FA K     E   +  L+ M
Sbjct: 514 VIWGSLMSACRIHGELELGK----FAAKRILELEPDHDGALVLM 553


>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 650

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/665 (37%), Positives = 364/665 (54%), Gaps = 47/665 (7%)

Query: 181 ESLYLFKKMQS----LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWN 236
           +S+Y  K++ S    +G+++D   F   +        S  +  AH++FD +    +  WN
Sbjct: 18  KSMYQLKQIHSHTIKMGLSSDPL-FRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMFIWN 76

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MI GY      E G+ ++  ML      D  T    L G     AL  G+ +   A+K 
Sbjct: 77  TMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKH 136

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            F   +      + M+S CG +D A +VF+      VV+W  M++GY R       ++ F
Sbjct: 137 GFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNR-------VKQF 189

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
           +          +  +  +L AC+    LE GK +  YI    ++           M+A C
Sbjct: 190 K----------ISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEH----------MFAAC 229

Query: 417 GSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACIL 465
           G M +A+ VF+ M  +D+VSW  MI          GAL LF  M + N +PD  TM  IL
Sbjct: 230 GEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSIL 289

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
            ACA L ALE G  +   I ++    D  V NA+VDMY KCG +  A+ +F  +  KD  
Sbjct: 290 IACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKF 349

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           +WT MI G  ++G G +A+A F++M +A + PDE+++I VL AC    +VD+G  FF  M
Sbjct: 350 TWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNM 405

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
             +  I+P + HY CMVDLL   G L EA   I  MPV P++ +WGS L  CR+H  V+L
Sbjct: 406 TMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQL 465

Query: 646 AEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
           A+  A+ + ELEP+N   YVLL N+YA ++KWE + ++R+ +  RG+KK PGCS +E+ G
Sbjct: 466 ADMAAKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNG 525

Query: 706 KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEK 765
            V  FVAG  SHP +K+I + L+ +   + + GY P T    ++  E +KE AL  HSEK
Sbjct: 526 NVYEFVAGDQSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEK 585

Query: 766 LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCS 825
           LA+A+ +++   G TIR+ KNLR+C DCH MAK +S+   RE++++D  RFHHF+ G CS
Sbjct: 586 LAIAYALISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFHHFRHGSCS 645

Query: 826 CRGFW 830
           C  FW
Sbjct: 646 CNNFW 650



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 223/474 (47%), Gaps = 82/474 (17%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFV-TCGDLKEGRRVFNKID 159
           S+L+ C   KS+   K++HS   + G+  D       + F      G++    +VF+ I 
Sbjct: 12  SLLEKC---KSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIP 68

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA---------- 209
           +  +FIWN ++  YSK  + +  + ++  M +  I  D +TF   LK             
Sbjct: 69  HPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKE 128

Query: 210 VVGNSRR----------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           ++ ++ +                      V  AHK+FD     +VV+WN M+SGY  N V
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGY--NRV 186

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
            +     FK          ++ M+ VLS C+    L +G+ +  +            N  
Sbjct: 187 KQ-----FK----------ISKMLLVLSACSKLKDLEWGKHIFKY-----------INGG 220

Query: 308 LLD-MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           +++ M++ CG++D A  VF+ M  R VVSWT+MI GY R   F GA+ LFR M    ++P
Sbjct: 221 IVEHMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKP 280

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D + + SIL ACA  G LE+G+ V   I +N  ++  +V NAL+DMY KCG++  A+ VF
Sbjct: 281 DEFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVF 340

Query: 427 NQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALE 475
            +M  KD  +W TMI           AL +F  M++ +  PD +T   +L AC     ++
Sbjct: 341 KEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVD 396

Query: 476 RGREIH-GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISW 527
           +G+       ++HGI         +VD+    G L  A  +   +P K + I W
Sbjct: 397 KGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVW 450



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 15/172 (8%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T  SIL  CA L +LE G+ V + I +     +D  +G+ LV M+  CG++++ +
Sbjct: 279 KPDEFTMVSILIACALLGALELGEWVKTCI-DKNSNKNDSFVGNALVDMYFKCGNVRKAK 337

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-KCLAVV 211
           +VF ++     F W  ++   +  G+ +E+L +F  M    +  D  T+  VL  C+   
Sbjct: 338 KVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCACMVDK 397

Query: 212 GNSRRVKDAHKLFDELSDRD-----VVSWNCMISGYIANGVAEKGLEVFKEM 258
           G S         F  ++ +      V  + CM+      G  E+ LEV   M
Sbjct: 398 GKS--------FFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNM 441


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/603 (37%), Positives = 344/603 (57%), Gaps = 34/603 (5%)

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           GFN+       +L+ C N  A   G+ VHA  +K  +   +     L+ +Y+KC  L  A
Sbjct: 238 GFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDA 297

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI----------------- 364
             VF++M ER+VVSWT+MI+ Y++ G    A+ LF   V+  +                 
Sbjct: 298 HNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRP 357

Query: 365 ----EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
               EP+ +   ++L +C       +G+ +H  I + + +  ++V ++L+DMYAK G + 
Sbjct: 358 WVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIH 417

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACA 469
           +A +VF  +P +D+VS   +I           AL+LF  +  +  + + VT   +L A +
Sbjct: 418 EARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALS 477

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            LAAL+ G+++H ++LR  I +   + N+++DMY KCG L  +R +FD +  + +ISW  
Sbjct: 478 GLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNA 537

Query: 530 MIAGYGMHGFGCDAIATFNDMRQ-AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY- 587
           M+ GY  HG G + +  F  MR+   ++PD V+ ++VL  CSH GL D+G   FN M   
Sbjct: 538 MLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSG 597

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
           +  +EPK+EHY C+VDLL R+G + EA+ FI+ MP  P A IWGSLL  CR+H  V + E
Sbjct: 598 KIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGE 657

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
              + + E+EP N G YV+L+N+YA A +WE+V  LR+ + ++ + K PG S IE+   +
Sbjct: 658 FAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVL 717

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
           + F A   SHP  ++I   +K L    K  GY P     L + DE +KE  L GHSEKLA
Sbjct: 718 HTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLA 777

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
           ++FG++  PA   IRV KNLR+C DCH  AK++SK   RE+ LRD NRFH    G+CSC 
Sbjct: 778 LSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCE 837

Query: 828 GFW 830
            +W
Sbjct: 838 DYW 840



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 192/391 (49%), Gaps = 41/391 (10%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF----KEMLNLGFNVDLA------ 268
           DAH +FDE+ +R+VVSW  MIS Y   G A + L +F    K  L   + +D        
Sbjct: 296 DAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPN 355

Query: 269 -----------TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
                      T  TVL+ C +    + GR +H+  +K  +   +   ++LLDMY+K G 
Sbjct: 356 RPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGK 415

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           +  A  VFE + ER VVS T++I+GYA+ G+ + A+ LFR +  EG++ +    T +L A
Sbjct: 416 IHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTA 475

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
            +    L++GK VH+++  +++ S + + N+L+DMY+KCG++  +  +F+ M  + ++SW
Sbjct: 476 LSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISW 535

Query: 438 NTMI----------GALDLFVAMLQ--NFEPDGVTMACILPACASLAALERGREIHGYIL 485
           N M+            L LF  M +    +PD VT+  +L  C+     ++G  I   + 
Sbjct: 536 NAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMS 595

Query: 486 RHGISADRNVAN--AIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCD 542
              I  +  + +   +VD+  + G +  A      +P +   + W  ++    +H    D
Sbjct: 596 SGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHS-NVD 654

Query: 543 AIATFNDMRQAGIEPDEVS---FISVLYACS 570
            I  F   +   IEP        +S LYA +
Sbjct: 655 -IGEFAGQQLLEIEPGNAGNYVILSNLYASA 684



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 192/404 (47%), Gaps = 58/404 (14%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + Y +IL  C + ++  +G++VH+ + ++   +    L ++L+ ++  C  L +   VF+
Sbjct: 244 ENYNAILNECVNKRAFREGQRVHAHMIKTR-YLPSVFLRTRLIVLYTKCDSLGDAHNVFD 302

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLF---KKMQSLGIAA----------------- 196
           ++    V  W  ++  YS+ G   ++L LF    K+   G+ A                 
Sbjct: 303 EMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTE 362

Query: 197 -DSYTFSCVL-KCLAVVG-------------------------------NSRRVKDAHKL 223
            + +TF+ VL  C + +G                                  ++ +A  +
Sbjct: 363 PNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTV 422

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           F+ L +RDVVS   +ISGY   G+ E+ LE+F+ +   G   +  T   VL+  +   AL
Sbjct: 423 FECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAAL 482

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G+ VH   L++     +   N+L+DMYSKCG+L  + R+F+ M ER+V+SW +M+ GY
Sbjct: 483 DLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGY 542

Query: 344 AREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKEN--DMQ 400
           ++ G     ++LF  M  E  ++PD   I ++L  C+  GL + G ++ + +     +++
Sbjct: 543 SKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVE 602

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
             +     ++D+  + G + +A     +MP +   + W +++GA
Sbjct: 603 PKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGA 646



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 13/201 (6%)

Query: 67  NAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
            A I  + ++G  E+A+E+      E  K +  TY  +L   + L +L+ GK+VH+ +  
Sbjct: 435 TAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLR 494

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
           S I     VL + L+ M+  CG+L   RR+F+ +    V  WN ++  YSK G  +E L 
Sbjct: 495 SEIP-SFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLK 553

Query: 185 LFKKM-QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS------DRDVVSWNC 237
           LF  M +   +  DS T   VL   +  G   +      +F+++S      +  +  + C
Sbjct: 554 LFTLMREETKVKPDSVTILAVLSGCSHGGLEDK---GLNIFNDMSSGKIEVEPKMEHYGC 610

Query: 238 MISGYIANGVAEKGLEVFKEM 258
           ++     +G  E+  E  K+M
Sbjct: 611 VVDLLGRSGRVEEAFEFIKKM 631


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/559 (40%), Positives = 326/559 (58%), Gaps = 11/559 (1%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G  +HA +LK           +LL +Y++CG L  A RVF++M   S VSWT++I  
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 193

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           Y   G    A+ + R     G+ PD +    +L ACA    L  G+ V    ++  +  S
Sbjct: 194 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 253

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-L 451
           ++V+ A +D+Y KCG MA A  VF++M  KD V+W  M+G          ALDLF+AM  
Sbjct: 254 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 313

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
           +   PD   +A  L AC  L AL+ GR+    +       +  +  A++DMY KCG    
Sbjct: 314 EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAE 373

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A  +F  +  KD+I W  MI G GM G    A      M ++G++ ++ +FI +L +C+H
Sbjct: 374 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTH 433

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           +GL+ +G R+F+ M    +I P++EHY C+VDLLSR G L EA++ I+ MP+  +A I G
Sbjct: 434 TGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILG 493

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           +LL GC+IH   +LAE V   +  LEP N+G YV+L+N+Y+   +WE+  KLR  +  +G
Sbjct: 494 ALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKG 553

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
           ++K P CSW+E +GKV+ F  G  SHP + +I   L  L LEMK  GY P T   + + +
Sbjct: 554 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 613

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           + EKE  L  HSEKLA+AF +L    G+TIRVTKNLRVC DCH   K +S+   REI++R
Sbjct: 614 DEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVR 673

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           D+NRFH F+DG CSC  +W
Sbjct: 674 DNNRFHCFRDGSCSCNDYW 692



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 150/313 (47%), Gaps = 12/313 (3%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A ++FDE+     VSW  +I+ Y+  G   + + V +     G   D  T V VL+ CA 
Sbjct: 172 AQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 231

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L  G  V   A +   ++ +      +D+Y KCG++  A  VF+KM ++  V+W +M
Sbjct: 232 VADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAM 291

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           + GYA  G    A+ LF  M  EG+ PD YA+   L AC   G L++G+     +  ++ 
Sbjct: 292 VGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 351

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLF------VAMLQN 453
             +  +  AL+DMYAKCGS A+A  VF QM  KDI+ WN MI  L +         ++  
Sbjct: 352 LDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQ 411

Query: 454 FEPDGV-----TMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCG 507
            E  GV     T   +L +C     ++ GR   H     + IS        IVD+  + G
Sbjct: 412 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAG 471

Query: 508 VLVLARSLFDMIP 520
           +L  A  L D +P
Sbjct: 472 LLQEAHQLIDDMP 484



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 154/353 (43%), Gaps = 34/353 (9%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           L  G+++H+   +     +  VL S L+ ++  CG L   +RVF+++ +     W  L+ 
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTS-LLTLYARCGLLHRAQRVFDEMPHPSTVSWTALIT 192

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN------------------ 213
            Y   G+ +E++++ +   + G+  DS+T   VL   A V +                  
Sbjct: 193 AYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQ 252

Query: 214 --------------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
                            +  A ++FD++ D+D V+W  M+ GY +NG   + L++F  M 
Sbjct: 253 SVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQ 312

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
             G   D   +   LS C   GAL  GR          F         L+DMY+KCG   
Sbjct: 313 AEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTA 372

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A  VF++M ++ ++ W +MI G    G    A  L   M + G++ +      +L +C 
Sbjct: 373 EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCT 432

Query: 380 CDGLLEIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
             GL++ G+   H+  K   +   +     ++D+ ++ G + +A  + + MP+
Sbjct: 433 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPM 485



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 126/301 (41%), Gaps = 36/301 (11%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T ++ A I  + + G+L +A+ V  ++     + D+ T   +L  CA +  L  G+ V  
Sbjct: 184 TVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWR 243

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              + GI      + +  V ++V CG++ + R VF+K+ +     W  ++  Y+  G+ +
Sbjct: 244 AAEQEGIA-QSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPR 302

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------NSRRVKD--------------- 219
           E+L LF  MQ+ G+  D Y  +  L     +G       + R+ D               
Sbjct: 303 EALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALI 362

Query: 220 -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      A  +F ++  +D++ WN MI G    G  +    +  +M   G  ++  
Sbjct: 363 DMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDN 422

Query: 269 TMVTVLSGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T + +L  C + G +  GR   H        S  I     ++D+ S+ G L  A ++ + 
Sbjct: 423 TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDD 482

Query: 328 M 328
           M
Sbjct: 483 M 483


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/538 (40%), Positives = 324/538 (60%), Gaps = 15/538 (2%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N L+  Y K GDL+ A ++F++M  R+V +W +M+AG    G+ + ++  F  M REG++
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 366 PDVYAITSILHACACDGLLEI--GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           PD Y + S+   CA  GL ++  G+ VH Y+  + +   + V ++L  MY +CG + D E
Sbjct: 64  PDEYGLGSLFRCCA--GLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGE 121

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVTMACILPACASLA 472
           +    +P  +IVS NT I          GAL+ F  M     E + VT    + +C+ LA
Sbjct: 122 AALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLA 181

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           AL +G++IH   ++ G+     V  ++V MY +CG L  +  +       DL+  + MI+
Sbjct: 182 ALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMIS 241

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
            YG HG G  A+  F  M  AG EP+EV+F+++LYACSHSGL DEG   F +M     ++
Sbjct: 242 AYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQ 301

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P ++HY C+VDLL R+G L+EA   I  MPV PD  IW +LL  C+   +  +AE++AE 
Sbjct: 302 PSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAER 361

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           V EL+P ++  YVLL+N+ A + +WE+V K+RE +  + ++K PG SW+E+KG+++ F  
Sbjct: 362 VIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCT 421

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  SH   ++I   L+ +   +++ GY P       + ++ EKEV+L  HSEKLA+AF  
Sbjct: 422 GDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAF 481

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           L+LP G  IRV KNLRVC DCH   K MSK   REIV+RD +RFHHFKDG+CSC  +W
Sbjct: 482 LSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 159/340 (46%), Gaps = 34/340 (10%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           L+  +V  GDL+  R++F+++    V  WN ++   + +G  +ESL  F  M+  G+  D
Sbjct: 6   LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65

Query: 198 SYTFSCVLKCLA------------------------VVGNSRR--------VKDAHKLFD 225
            Y    + +C A                         VG+S          ++D      
Sbjct: 66  EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            L   ++VS N  ISG   NG AE  LE F  M   G   +  T V+ ++ C++  AL  
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ +HA A+K    K +    +L+ MYS+CG L  + RV  +     +V  ++MI+ Y  
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 245

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLY 404
            G    A+ LF+ M+  G EP+     ++L+AC+  GL + G +  + + K   +Q S+ 
Sbjct: 246 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVK 305

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
               ++D+  + G + +AE +   MPV+ D V W T++ A
Sbjct: 306 HYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 345



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 154/329 (46%), Gaps = 13/329 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++ A KLFDE+  R+V +WN M++G   +G+ E+ L  F  M   G   D   + ++   
Sbjct: 16  LETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRC 75

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA    ++ GR VHA+ +++   +++   ++L  MY +CG L         +   ++VS 
Sbjct: 76  CAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSC 135

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            + I+G  + G  +GA+  F  M   G+E +     S + +C+    L  G+ +H    +
Sbjct: 136 NTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIK 195

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
             +   + V  +L+ MY++CG + D+E V  +    D+V  + MI           A+ L
Sbjct: 196 TGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGL 255

Query: 447 FVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYV 504
           F  M+    EP+ VT   +L AC+     + G      + + +G+         IVD+  
Sbjct: 256 FKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLG 315

Query: 505 KCGVLVLARSLFDMIPAK-DLISWTIMIA 532
           + G L  A  L   +P + D + W  +++
Sbjct: 316 RSGCLNEAEDLILSMPVQPDGVIWKTLLS 344



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/327 (21%), Positives = 140/327 (42%), Gaps = 37/327 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSII 122
            +NA +      G  E+++   ++  +  +    Y   S+ + CA L+ +  G++VH+ +
Sbjct: 33  TWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYV 92

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG+   D  +GS L  M++ CG L++G      + +  +   N  +   ++ G+ + +
Sbjct: 93  VRSGL-DRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGA 151

Query: 183 LYLFKKMQSLGIAADSYTF-SCVLKC--LAVVGNSRRVK--------------------- 218
           L  F  M+  G+ A++ TF S V  C  LA +   +++                      
Sbjct: 152 LEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHM 211

Query: 219 --------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                   D+ ++  E S  D+V  + MIS Y  +G  +K + +FK+M+  G   +  T 
Sbjct: 212 YSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTF 271

Query: 271 VTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +T+L  C++ G    G        K       +     ++D+  + G L+ A  +   M 
Sbjct: 272 LTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMP 331

Query: 330 -ERSVVSWTSMIAGYAREGVFDGAIRL 355
            +   V W ++++    +  FD A R+
Sbjct: 332 VQPDGVIWKTLLSACKTQKKFDMAERI 358


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/593 (37%), Positives = 351/593 (59%), Gaps = 14/593 (2%)

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           KG  +F+E     F V  + + +++   ++C ++ +  A+HA  +K+    +    + L+
Sbjct: 104 KGCCIFREASQ--FIVVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLV 161

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF-RGMVREGIEPDV 368
            MY K G  + A R+F++M  + +VSW S+++G +  G     +  F R     G +P+ 
Sbjct: 162 SMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNE 221

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
             + S++ ACA  G L+ GK +H  + +  M     V N+L++MY K G +  A  +F +
Sbjct: 222 VTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEE 281

Query: 429 MPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG 477
           MPV+ +VSWN+M+            +DLF  M +    PD  TM  +L AC       + 
Sbjct: 282 MPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQA 341

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
             IH YI R G +AD  +A A++++Y K G L  +  +F+ I  +D I+WT M+AGY +H
Sbjct: 342 ESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVH 401

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
             G +AI  F+ M + G+E D V+F  +L ACSHSGLV+EG ++F +M     +EP+L+H
Sbjct: 402 ACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDH 461

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           Y+CMVDLL R+G L +AY  I+ MP+ P + +WG+LL  CR++  V+L ++VAE +  L+
Sbjct: 462 YSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLD 521

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           P +   Y++L+N+Y+ A  W +  K+R  +  R L +NPGCS+IE   K++ FV G   H
Sbjct: 522 PSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLH 581

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
           P + +I + L+ L  +++  G  PKT + L + DE  K   +  HSEKLA+AFG+L   +
Sbjct: 582 PRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGS 641

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G  + +TKNLR+CGDCH  AKF S   +R I++RDS RFHHF DG CSCR +W
Sbjct: 642 GVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 205/444 (46%), Gaps = 67/444 (15%)

Query: 85  VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT 144
           V+YS  +S +   + C+ +  C+          +H+ + +S +   DG +G +LV M+  
Sbjct: 117 VVYSIVQSLVFAISSCTSVSYCS---------AIHARVIKS-LNYSDGFIGDRLVSMYFK 166

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS------------- 191
            G  ++ +R+F+++ N  +  WN LM   S  G     L  F +M++             
Sbjct: 167 LGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLS 226

Query: 192 -------LGIAADSYTFSCVLKCLAVVGNSRRVKD-------------AHKLFDELSDRD 231
                  +G   +  +   V+  L + G ++ V               A +LF+E+  R 
Sbjct: 227 VVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRS 286

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           +VSWN M+  +  NG AEKG+++F  M   G N D ATMV +L  C + G      ++HA
Sbjct: 287 LVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHA 346

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
           +  +  F+ +I     LL++Y+K G L+ +  +FE++ +R  ++WT+M+AGYA       
Sbjct: 347 YIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGRE 406

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALM 410
           AI+LF  MV+EG+E D    T +L AC+  GL+E GK   + + E   ++  L   + ++
Sbjct: 407 AIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMV 466

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACAS 470
           D+  + G + DA  +   MP+                       EP       +L AC  
Sbjct: 467 DLLGRSGRLEDAYELIKSMPM-----------------------EPSSGVWGALLGACRV 503

Query: 471 LAALERGREIHGYILRHGISADRN 494
              +E G+E+   +L    S  RN
Sbjct: 504 YGNVELGKEVAEQLLSLDPSDHRN 527



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 166/318 (52%), Gaps = 17/318 (5%)

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSG 276
           +DA +LFDE+ ++D+VSWN ++SG    G     L  F  M    G   +  T+++V+S 
Sbjct: 171 EDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSA 230

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA+ GAL  G+++H   +K   S +    N+L++MY K G LD A ++FE+M  RS+VSW
Sbjct: 231 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 290

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            SM+  +   G  +  + LF  M R GI PD   + ++L AC   GL    + +H YI  
Sbjct: 291 NSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHR 350

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
               + + ++ AL+++YAK G +  +E +F ++  +D ++W  M+           A+ L
Sbjct: 351 CGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKL 410

Query: 447 FVAML-QNFEPDGVTMACILPACASLAALERGR---EIHGYILRHGISADRNVANAIVDM 502
           F  M+ +  E D VT   +L AC+    +E G+   EI   + R  +    +  + +VD+
Sbjct: 411 FDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYR--VEPRLDHYSCMVDL 468

Query: 503 YVKCGVLVLARSLFDMIP 520
             + G L  A  L   +P
Sbjct: 469 LGRSGRLEDAYELIKSMP 486


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 261/754 (34%), Positives = 393/754 (52%), Gaps = 77/754 (10%)

Query: 151  GRRVFNKIDNGKV-FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK--- 206
            G  + +KI  G V  +  LL   +S +  F   L  F    S  +   +Y  S VL    
Sbjct: 258  GSMLASKISQGTVATVGGLLFLGFSLSSYFYPPLXYFSSTFSDSM---NYPNSEVLHAKL 314

Query: 207  ----CLAVVGN--------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                C+ + GN        S+ ++ AHK+F+E+   DV SW  +ISG+   G++   L +
Sbjct: 315  IKNGCVGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGL 374

Query: 255  FKEMLNLGFNVDLATMVTVLSGCA-NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
            F +M + G   +  T+  VL  C+ N      G+ +H + L+     +   NN++LD Y 
Sbjct: 375  FTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYV 434

Query: 314  KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR---------------G 358
            KC     A ++F  M E+  VSW  M++ Y + G    ++ LFR               G
Sbjct: 435  KCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDG 494

Query: 359  MVREGIE--------------PDVYAIT-SILHACACD-GLLEIGKDVHDYIKENDMQSS 402
            ++R G E              P    +T SI    A    +L +GK +H  + +  +   
Sbjct: 495  LMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDD 554

Query: 403  LYVSNALMDMYAKCGSMADAESVFNQMP---------------VKDIVSWNTMIG----- 442
             +V N+L+DMY KCG M  A  +F  +P               V + VSW++M+      
Sbjct: 555  GFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQN 614

Query: 443  -----ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                 AL  F  M+    E D  T+  ++ ACAS   LE GR++HGYI + G   D  + 
Sbjct: 615  GRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLG 674

Query: 497  NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
            ++I+DMYVKCG L  A  +F+    ++++ WT MI+G  +HG G +A+  F  M   GI 
Sbjct: 675  SSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGIT 734

Query: 557  PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
            P+EVSF+ VL ACSH+GL++EG ++F +MR    I P  EH+ CMVDL  R G L+E   
Sbjct: 735  PNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKE 794

Query: 617  FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
            FI    ++  +++W S L  CR+H  +++   V + + ELEP + G Y+L +++ A   +
Sbjct: 795  FIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHR 854

Query: 677  WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
            WEE  K+R  + +RG+KKNP  SWI++K +V+ FV G  SHP   KI S L  L   +K 
Sbjct: 855  WEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKE 914

Query: 737  EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
             GY       + + ++ +++V L  HSEKLA+A+GI++   G  IRV KNLRVC DCH  
Sbjct: 915  IGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNF 974

Query: 797  AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             K+ S+   REI++RD +RFHHFK G CSC  +W
Sbjct: 975  IKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 50/268 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I      G    A+E+LY   +     +  T+   L L + L  L  GK++H+ +
Sbjct: 487 SWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQV 546

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI---------------WN 167
            + G V+DDG + + L+ M+  CG++++   +F  +      +               W+
Sbjct: 547 LKVG-VLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWS 605

Query: 168 LLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN---SRRV------- 217
            ++  Y + G F+++L  F  M    +  D +T + V+   A  G     R+V       
Sbjct: 606 SMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKI 665

Query: 218 ----------------------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                                  DA  +F++  DR+VV W  MISG   +G   + + +F
Sbjct: 666 GHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLF 725

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGAL 283
           + M+N G   +  + V VL+ C++ G L
Sbjct: 726 ELMINEGITPNEVSFVGVLTACSHAGLL 753



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 3/155 (1%)

Query: 60  VCKTKNYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKK 117
           V ++ ++++ +  + + G  E A++        + ++D  T  S++  CA    LE G++
Sbjct: 598 VVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQ 657

Query: 118 VHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
           VH  I + G  +D   LGS ++ M+V CG L +   +FN+  +  V +W  ++   +  G
Sbjct: 658 VHGYIQKIGHGLDV-FLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHG 716

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
             +E++ LF+ M + GI  +  +F  VL   +  G
Sbjct: 717 QGREAVRLFELMINEGITPNEVSFVGVLTACSHAG 751


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/559 (40%), Positives = 329/559 (58%), Gaps = 11/559 (1%)

Query: 283  LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
            L  G  +HA +LK           +LL +Y+KCG L  A RVF++M   S V WT++I  
Sbjct: 542  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 601

Query: 343  YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
            Y   G    A+ + R     G+ PD +    +L ACA    L  G+ V    ++  +  S
Sbjct: 602  YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 661

Query: 403  LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-L 451
            ++V+ A +D+Y KCG MA A  VF++M  KD V+W  M+G          ALDLF+AM  
Sbjct: 662  VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 721

Query: 452  QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
            +  +PD   +A  L AC  L AL+ GR+    +       +  +  A++DMY KCG  V 
Sbjct: 722  EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 781

Query: 512  ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
            A  +F  +  KD+I W  MI G GM G    A A    M ++G++ ++ +FI +L +C+H
Sbjct: 782  AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 841

Query: 572  SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
            +GL+ +G R+F+ M    +I P++EHY CMVDLLSR G L EA++ ++ MP+  +A I G
Sbjct: 842  TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILG 901

Query: 632  SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
            +LL GC+IH   +LAE V + +  LEP N+G YV+L+N+Y+   +WE+  KLR  +  +G
Sbjct: 902  ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKG 961

Query: 692  LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
            ++K P CSW+E +GKV+ F  G  SHP + +I   L  L LEMK  GY P T   + + +
Sbjct: 962  VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 1021

Query: 752  EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
            + EKE  L  HSEKLA+AF +L    G+TIRVTKNLRVC DCH   K +S+   REI++R
Sbjct: 1022 DEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVR 1081

Query: 812  DSNRFHHFKDGRCSCRGFW 830
            D+NRFH F+DG CSC  +W
Sbjct: 1082 DNNRFHCFRDGSCSCNDYW 1100



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 149/313 (47%), Gaps = 12/313 (3%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A ++FDE+     V W  +I+ Y+  G   + + V +     G   D  T V VL+ CA 
Sbjct: 580 AQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 639

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L  G  V   A +   ++ +      +D+Y KCG++  A  VF+KM  +  V+W +M
Sbjct: 640 IADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAM 699

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           + GYA  G    A+ LF  M  EG++PD YA+   L AC   G L++G+     +  ++ 
Sbjct: 700 VGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 759

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQN 453
             +  +  AL+DMYAKCGS  +A  VF QM  KDI+ WN MI      G   +  A++  
Sbjct: 760 LDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQ 819

Query: 454 FEPDGV-----TMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCG 507
            E  GV     T   +L +C     ++ GR   H     + IS        +VD+  + G
Sbjct: 820 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAG 879

Query: 508 VLVLARSLFDMIP 520
           +L  A  L D +P
Sbjct: 880 LLQEAHQLVDDMP 892



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 153/354 (43%), Gaps = 34/354 (9%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
            L  G+++H+   +     +  VL S L+ ++  CG L   +RVF+++ +     W  L+
Sbjct: 541 PLRAGEQLHARSLKLPSHTNPHVLTS-LLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALI 599

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN----------------- 213
             Y   G+ +E++++ +   + G+  DS+T   VL   A + +                 
Sbjct: 600 TAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 659

Query: 214 ---------------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
                             +  A ++FD++  +D V+W  M+ GY +NG   + L++F  M
Sbjct: 660 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 719

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
              G   D   +   LS C   GAL  GR          F         L+DMY+KCG  
Sbjct: 720 QAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGST 779

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
             A  VF++M ++ ++ W +MI G    G    A  L   M + G++ +      +L +C
Sbjct: 780 VEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSC 839

Query: 379 ACDGLLEIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
              GL++ G+   H+  K   +   +     ++D+ ++ G + +A  + + MP+
Sbjct: 840 THTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPM 893



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 126/301 (41%), Gaps = 36/301 (11%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T  + A I  + + G+L +A+ V  ++  +  + D+ T   +L  CA +  L  G+ V  
Sbjct: 592 TVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWR 651

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              + G V     + +  V ++V CG++ + R VF+K+ +     W  ++  Y+  G+ +
Sbjct: 652 AAEQEG-VAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPR 710

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------NSRRVKD--------------- 219
           E+L LF  MQ+ G+  D Y  +  L     +G       + R+ D               
Sbjct: 711 EALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALI 770

Query: 220 -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      A  +F ++  +D++ WN MI G    G  +    +  +M   G  ++  
Sbjct: 771 DMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDN 830

Query: 269 TMVTVLSGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T + +L  C + G +  GR   H        S  I     ++D+ S+ G L  A ++ + 
Sbjct: 831 TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDD 890

Query: 328 M 328
           M
Sbjct: 891 M 891


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/559 (40%), Positives = 329/559 (58%), Gaps = 11/559 (1%)

Query: 283  LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
            L  G  +HA +LK           +LL +Y+KCG L  A RVF++M   S V WT++I  
Sbjct: 566  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 625

Query: 343  YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
            Y   G    A+ + R     G+ PD +    +L ACA    L  G+ V    ++  +  S
Sbjct: 626  YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 685

Query: 403  LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-L 451
            ++V+ A +D+Y KCG MA A  VF++M  KD V+W  M+G          ALDLF+AM  
Sbjct: 686  VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 745

Query: 452  QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
            +  +PD   +A  L AC  L AL+ GR+    +       +  +  A++DMY KCG  V 
Sbjct: 746  EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 805

Query: 512  ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
            A  +F  +  KD+I W  MI G GM G    A A    M ++G++ ++ +FI +L +C+H
Sbjct: 806  AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 865

Query: 572  SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
            +GL+ +G R+F+ M    +I P++EHY CMVDLLSR G L EA++ ++ MP+  +A I G
Sbjct: 866  TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILG 925

Query: 632  SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
            +LL GC+IH   +LAE V + +  LEP N+G YV+L+N+Y+   +WE+  KLR  +  +G
Sbjct: 926  ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKG 985

Query: 692  LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
            ++K P CSW+E +GKV+ F  G  SHP + +I   L  L LEMK  GY P T   + + +
Sbjct: 986  VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 1045

Query: 752  EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
            + EKE  L  HSEKLA+AF +L    G+TIRVTKNLRVC DCH   K +S+   REI++R
Sbjct: 1046 DEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVR 1105

Query: 812  DSNRFHHFKDGRCSCRGFW 830
            D+NRFH F+DG CSC  +W
Sbjct: 1106 DNNRFHCFRDGSCSCNDYW 1124



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 149/313 (47%), Gaps = 12/313 (3%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A ++FDE+     V W  +I+ Y+  G   + + V +     G   D  T V VL+ CA 
Sbjct: 604 AQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 663

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L  G  V   A +   ++ +      +D+Y KCG++  A  VF+KM  +  V+W +M
Sbjct: 664 IADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAM 723

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           + GYA  G    A+ LF  M  EG++PD YA+   L AC   G L++G+     +  ++ 
Sbjct: 724 VGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 783

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQN 453
             +  +  AL+DMYAKCGS  +A  VF QM  KDI+ WN MI      G   +  A++  
Sbjct: 784 LDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQ 843

Query: 454 FEPDGV-----TMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCG 507
            E  GV     T   +L +C     ++ GR   H     + IS        +VD+  + G
Sbjct: 844 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAG 903

Query: 508 VLVLARSLFDMIP 520
           +L  A  L D +P
Sbjct: 904 LLQEAHQLVDDMP 916



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 153/354 (43%), Gaps = 34/354 (9%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
            L  G+++H+   +     +  VL S L+ ++  CG L   +RVF+++ +     W  L+
Sbjct: 565 PLRAGEQLHARSLKLPSHTNPHVLTS-LLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALI 623

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN----------------- 213
             Y   G+ +E++++ +   + G+  DS+T   VL   A + +                 
Sbjct: 624 TAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 683

Query: 214 ---------------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
                             +  A ++FD++  +D V+W  M+ GY +NG   + L++F  M
Sbjct: 684 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 743

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
              G   D   +   LS C   GAL  GR          F         L+DMY+KCG  
Sbjct: 744 QAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGST 803

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
             A  VF++M ++ ++ W +MI G    G    A  L   M + G++ +      +L +C
Sbjct: 804 VEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSC 863

Query: 379 ACDGLLEIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
              GL++ G+   H+  K   +   +     ++D+ ++ G + +A  + + MP+
Sbjct: 864 THTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPM 917



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 126/301 (41%), Gaps = 36/301 (11%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T  + A I  + + G+L +A+ V  ++  +  + D+ T   +L  CA +  L  G+ V  
Sbjct: 616 TVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWR 675

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              + G V     + +  V ++V CG++ + R VF+K+ +     W  ++  Y+  G+ +
Sbjct: 676 AAEQEG-VAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPR 734

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------NSRRVKD--------------- 219
           E+L LF  MQ+ G+  D Y  +  L     +G       + R+ D               
Sbjct: 735 EALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALI 794

Query: 220 -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      A  +F ++  +D++ WN MI G    G  +    +  +M   G  ++  
Sbjct: 795 DMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDN 854

Query: 269 TMVTVLSGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T + +L  C + G +  GR   H        S  I     ++D+ S+ G L  A ++ + 
Sbjct: 855 TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDD 914

Query: 328 M 328
           M
Sbjct: 915 M 915


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/559 (40%), Positives = 326/559 (58%), Gaps = 11/559 (1%)

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G  +HA +LK           +LL +Y++CG L  A RVF++M   S VSWT++I  
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 146

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           Y   G    A+ + R     G+ PD +    +L ACA    L  G+ V    ++  +  S
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 206

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-L 451
           ++V+ A +D+Y KCG MA A  VF++M  KD V+W  M+G          ALDLF+AM  
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
           +   PD   +A  L AC  L AL+ GR+    +       +  +  A++DMY KCG    
Sbjct: 267 EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAE 326

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A  +F  +  KD+I W  MI G GM G    A      M ++G++ ++ +FI +L +C+H
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTH 386

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           +GL+ +G R+F+ M    +I P++EHY C+VDLLSR G L EA++ I+ MP+  +A I G
Sbjct: 387 TGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILG 446

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           +LL GC+IH   +LAE V   +  LEP N+G YV+L+N+Y+   +WE+  KLR  +  +G
Sbjct: 447 ALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKG 506

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
           ++K P CSW+E +GKV+ F  G  SHP + +I   L  L LEMK  GY P T   + + +
Sbjct: 507 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 566

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           + EKE  L  HSEKLA+AF +L    G+TIRVTKNLRVC DCH   K +S+   REI++R
Sbjct: 567 DEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVR 626

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           D+NRFH F+DG CSC  +W
Sbjct: 627 DNNRFHCFRDGSCSCNDYW 645



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 150/313 (47%), Gaps = 12/313 (3%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A ++FDE+     VSW  +I+ Y+  G   + + V +     G   D  T V VL+ CA 
Sbjct: 125 AQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 184

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L  G  V   A +   ++ +      +D+Y KCG++  A  VF+KM ++  V+W +M
Sbjct: 185 VADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAM 244

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           + GYA  G    A+ LF  M  EG+ PD YA+   L AC   G L++G+     +  ++ 
Sbjct: 245 VGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 304

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLF------VAMLQN 453
             +  +  AL+DMYAKCGS A+A  VF QM  KDI+ WN MI  L +         ++  
Sbjct: 305 LDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQ 364

Query: 454 FEPDGV-----TMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCG 507
            E  GV     T   +L +C     ++ GR   H     + IS        IVD+  + G
Sbjct: 365 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAG 424

Query: 508 VLVLARSLFDMIP 520
           +L  A  L D +P
Sbjct: 425 LLQEAHQLIDDMP 437



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 154/353 (43%), Gaps = 34/353 (9%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           L  G+++H+   +     +  VL S L+ ++  CG L   +RVF+++ +     W  L+ 
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTS-LLTLYARCGLLHRAQRVFDEMPHPSTVSWTALIT 145

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN------------------ 213
            Y   G+ +E++++ +   + G+  DS+T   VL   A V +                  
Sbjct: 146 AYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQ 205

Query: 214 --------------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
                            +  A ++FD++ D+D V+W  M+ GY +NG   + L++F  M 
Sbjct: 206 SVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQ 265

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
             G   D   +   LS C   GAL  GR          F         L+DMY+KCG   
Sbjct: 266 AEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTA 325

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A  VF++M ++ ++ W +MI G    G    A  L   M + G++ +      +L +C 
Sbjct: 326 EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCT 385

Query: 380 CDGLLEIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
             GL++ G+   H+  K   +   +     ++D+ ++ G + +A  + + MP+
Sbjct: 386 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPM 438



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 126/301 (41%), Gaps = 36/301 (11%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           T ++ A I  + + G+L +A+ V  ++     + D+ T   +L  CA +  L  G+ V  
Sbjct: 137 TVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWR 196

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              + GI      + +  V ++V CG++ + R VF+K+ +     W  ++  Y+  G+ +
Sbjct: 197 AAEQEGIA-QSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPR 255

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG------NSRRVKD--------------- 219
           E+L LF  MQ+ G+  D Y  +  L     +G       + R+ D               
Sbjct: 256 EALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALI 315

Query: 220 -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      A  +F ++  +D++ WN MI G    G  +    +  +M   G  ++  
Sbjct: 316 DMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDN 375

Query: 269 TMVTVLSGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T + +L  C + G +  GR   H        S  I     ++D+ S+ G L  A ++ + 
Sbjct: 376 TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDD 435

Query: 328 M 328
           M
Sbjct: 436 M 436


>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
          Length = 830

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/552 (40%), Positives = 332/552 (60%), Gaps = 20/552 (3%)

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F  +   +  L++ Y+    L  A +VF++   +++  W +M+   A     + A+    
Sbjct: 280 FRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLA 339

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIG-----KDVHDYIKENDMQSSLYVSNALMDM 412
            M R G+  D Y+    L AC       +      +++H +          +V+  L+D 
Sbjct: 340 DMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDC 399

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ---NFEPDGV 459
           YAK G ++ AE VF  MP +++VSW+ MIG          A+ +F  M+    +  P+ +
Sbjct: 400 YAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSI 459

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           T+  +L ACA + AL +G+ +H YILR G     +V NA++ MY+KCG L   R +F+ I
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWI 519

Query: 520 -PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
              ++++SW  +I+GYGMHGFG +++  F +M + GI P+ ++F+SVL ACSH GLV++G
Sbjct: 520 GRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQG 579

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
            + F  M  E N+ P+ EHYACMVDLL R G L EA   I+ M + P   +WGSLL  CR
Sbjct: 580 KKLFESM-VEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACR 638

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
           IH  V+ AE    H+F+LEP N G YVLLA++YA A+   +V  L+E +    L+K PGC
Sbjct: 639 IHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVPGC 698

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           SWIE+K K+  FV+  + +P  +++++L+     +MK EGY P TR  L + +E EKE  
Sbjct: 699 SWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERI 758

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
           L GHSEKLA+AFG++   +G+ IR+TKNLR+C DCH + KF+SK   REIV+RD NRFHH
Sbjct: 759 LLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHH 818

Query: 819 FKDGRCSCRGFW 830
           F++G CSCR +W
Sbjct: 819 FRNGVCSCRDYW 830



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 194/417 (46%), Gaps = 47/417 (11%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVI 129
           I   C  G L +A  +L          +TY S+L   A  +       VH  +    +  
Sbjct: 224 IQMLCAHGRLAQATALLQGLPAPT--QRTYESLLLAAARARDTALAAAVHRRLEADPVFR 281

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
            D  L ++L+  +     L   R+VF++     +F+WN ++   +   + +E+L     M
Sbjct: 282 SDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADM 341

Query: 190 QSLGIAADSYTFSCVLK-CLAVVGN----SRRVKDAH----------------------- 221
             LG+  DSY+++  LK C+A   +    S RV++ H                       
Sbjct: 342 GRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYA 401

Query: 222 ---------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA---- 268
                    ++F  + DR++VSW+ MI  Y  N      +++F+EM  +  + DL     
Sbjct: 402 KLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEM--MASDADLVPNSI 459

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+V+VL  CA   AL  G+ +HA+ L+  F   +S  N L+ MY KCG L+    +F  +
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWI 519

Query: 329 G-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           G  R+VVSW S+I+GY   G    ++++F  M+ EGI P++    S+L AC+  GL+E G
Sbjct: 520 GRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQG 579

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
           K + + + E ++         ++D+  + G + +A  +   M ++     W +++GA
Sbjct: 580 KKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGA 636



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 162/341 (47%), Gaps = 24/341 (7%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A ++FDE   +++  WN M+         E+ L    +M  LG  VD  +    L  C  
Sbjct: 303 ARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIA 362

Query: 280 CGALMFG-----RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             A         R +HA A++  +        TL+D Y+K G +  A RVF  M +R++V
Sbjct: 363 ASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLV 422

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVYAITSILHACACDGLLEIGKDVHD 392
           SW++MI  YA+      AI++F+ M+    +  P+   I S+LHACA    L  GK +H 
Sbjct: 423 SWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHA 482

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM-PVKDIVSWNTMIG--------- 442
           YI        + V NALM MY KCG +     +FN +   +++VSWN++I          
Sbjct: 483 YILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGR 542

Query: 443 -ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            +L +F  M++    P+ +T   +L AC+ +  +E+G+++   ++ + ++        +V
Sbjct: 543 ESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMV 602

Query: 501 DMYVKCGVLVLARSLFDMI---PAKDLISWTIMIAGYGMHG 538
           D+  + G L  A  L   +   P+  +  W  ++    +HG
Sbjct: 603 DLLGRAGRLDEAVELIQSMRIQPSPQV--WGSLLGACRIHG 641


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/761 (31%), Positives = 398/761 (52%), Gaps = 44/761 (5%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHS-IICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           +D+      LQ C        G+ VH  ++   G+   D    + L+ M+   G L   R
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK------ 206
           R+F+++    +  +  L+  +++ G+F+ +  LF++++  G   + +  + +LK      
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176

Query: 207 ----------CLAVVGNSRR----------------VKDAHKLFDELSDRDVVSWNCMIS 240
                     C   +G+                   V DA  +F+ +  +D V W  M+S
Sbjct: 177 AAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS 236

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
            Y  N   E    VF +M   G   +   + +VL       +++ G+ +H  A+K     
Sbjct: 237 CYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDT 296

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           E      LLDMY+KCGD+  A   FE +    V+  + MI+ YA+    + A  LF  ++
Sbjct: 297 EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLM 356

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           R  + P+ Y+++S+L AC     L+ GK +H++  +   +S L+V NALMD YAKC  M 
Sbjct: 357 RSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMD 416

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFEP-DGVTMACILPACA 469
            +  +F+ +   + VSWNT++           AL +F  M     P   VT + +L ACA
Sbjct: 417 SSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACA 476

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           S A++    +IH  I +   + D  + N+++D Y KCG +  A  +F  +  +D+ISW  
Sbjct: 477 STASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNA 536

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           +I+GY +HG   DA+  F+ M ++ +E ++++F+++L  CS +GLV+ G   F+ MR + 
Sbjct: 537 IISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDH 596

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            I+P +EHY C+V LL R G L++A +FI  +P AP A +W +LL  C IH  V L    
Sbjct: 597 GIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFS 656

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           AE + E+EP +   YVLL+N+YA A   ++V  LR+ +   G++K PG SW+EIKG+++ 
Sbjct: 657 AEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHA 716

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F  G   HP  + I ++L+ L L+  REGY P     L + D+ +K   L  HSE+LA+A
Sbjct: 717 FSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALA 776

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           +G++  P G  IR+ KNLR C DCH     +SK  +REI++
Sbjct: 777 YGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/611 (37%), Positives = 345/611 (56%), Gaps = 19/611 (3%)

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           WN  +          + L ++ +ML  G   +  T    L  CA     + G   H    
Sbjct: 8   WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK--MGERSVVSWTSMIAGYAREGVFDGA 352
           K     E      L+ MY K   +D A +VFE+     +  V + ++++GY        A
Sbjct: 68  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
           + LFR M  EG+  +   +  ++ AC     LE+G  +H    +    S + V N  + M
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTM 461
           Y KCGS+  A+ +F++MPVK ++SWN M+            L+L+  M +    PD VT+
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 247

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
             +L +CA+L A   G E+   +   G +++  + NA+++MY +CG L  A+++FD +P 
Sbjct: 248 VGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 307

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           + L+SWT +I GYGMHG G  A+  F +M ++GIEPD  +F+ VL ACSH+GL D+G  +
Sbjct: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 367

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           F MM+    +EP  EHY+CMVDLL R G L EA   IE MP+ PD  +WG+LL  C+IH 
Sbjct: 368 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 427

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
            V+LAE   E V ELEP+N GYYVLL+N+Y+ A   + V ++R  +  + LKK+PGCS++
Sbjct: 428 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 487

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE--VAL 759
           E+KG+V+ F+ G  +H  + +I  +L+ L   + +E   P+      N +E  K+    +
Sbjct: 488 ELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD----NREESNKDGFTRV 543

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
             HSEKLA+AFG+LN   G  + + KNLR+C DCH   K +SK   R++ +RD+ RFHHF
Sbjct: 544 GVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHF 603

Query: 820 KDGRCSCRGFW 830
           ++G CSC+ +W
Sbjct: 604 RNGSCSCKDYW 614



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 222/448 (49%), Gaps = 49/448 (10%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-----SCVLKCLAVVGNSRR---- 216
           WN  + E +K   F ++L L+ +M   G   +++TF     SC    L ++G+       
Sbjct: 8   WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67

Query: 217 -----------------------VKDAHKLFDE--LSDRDVVSWNCMISGYIANGVAEKG 251
                                  V +A K+F+E   S +  V +N ++SGY++N      
Sbjct: 68  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           + +F++M   G  V+  T++ ++  C +   L  G ++H   LK  F  ++S  N  + M
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y KCG ++ A ++F++M  + ++SW +M++GYA+ G+    + L+R M   G+ PD   +
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 247

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
             +L +CA  G   +G +V   ++ +   S+ +++NAL++MYA+CG++  A++VF+ MP 
Sbjct: 248 VGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 307

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI 480
           + +VSW  +IG          A+ LF  M+++  EPDG    C+L AC+     ++G E 
Sbjct: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 367

Query: 481 HGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
              + R + +       + +VD+  + G L  A++L + +P K D   W  ++    +H 
Sbjct: 368 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 427

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVL 566
               A   F   R   +EP+ + +  +L
Sbjct: 428 NVELAELAFE--RVIELEPENIGYYVLL 453



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 33/226 (14%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           + E   +++ T   ++  C    +LE G  +H    + G   D  V+    + M++ CG 
Sbjct: 135 NEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNC-FITMYMKCGS 193

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           +   +++F+++    +  WN ++  Y++ G     L L++ M   G+  D  T   VL  
Sbjct: 194 VNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSS 253

Query: 208 LAVVGNSR--------------------------------RVKDAHKLFDELSDRDVVSW 235
            A +G                                    +  A  +FD + +R +VSW
Sbjct: 254 CANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSW 313

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
             +I GY  +G  E  +++FKEM+  G   D    V VLS C++ G
Sbjct: 314 TAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAG 359



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 3/150 (2%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  + + G     +E+  + + + +  D  T   +L  CA+L +   G +V   +
Sbjct: 211 SWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKM 270

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG    +  L + L+ M+  CG+L + + VF+ +    +  W  ++  Y   G+ + +
Sbjct: 271 QASGFT-SNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIA 329

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           + LFK+M   GI  D   F CVL   +  G
Sbjct: 330 VQLFKEMIRSGIEPDGTAFVCVLSACSHAG 359


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/538 (40%), Positives = 324/538 (60%), Gaps = 15/538 (2%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N L+  Y K GDL+ A ++F++M  R+V +W +M+AG    G+ + ++  F  M REG++
Sbjct: 112 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 171

Query: 366 PDVYAITSILHACACDGLLEI--GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           PD Y + S+   CA  GL ++  G+ VH Y+  + +   + V ++L  MY +CG + D E
Sbjct: 172 PDEYGLGSLFRCCA--GLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGE 229

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVTMACILPACASLA 472
           +    +P  +IVS NT I          GAL+ F  M     E + VT    + +C+ LA
Sbjct: 230 AALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLA 289

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           AL +G++IH   ++ G+     V  ++V MY +CG L  +  +       DL+  + MI+
Sbjct: 290 ALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMIS 349

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
            YG HG G  A+  F  M  AG EP+EV+F+++LYACSHSGL DEG   F +M     ++
Sbjct: 350 AYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQ 409

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P ++HY C+VDLL R+G L+EA   I  MPV PD  IW +LL  C+   +  +AE++AE 
Sbjct: 410 PSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAER 469

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           V EL+P ++  YVLL+N+ A + +WE+V K+RE +  + ++K PG SW+E+KG+++ F  
Sbjct: 470 VIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCT 529

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  SH   ++I   L+ +   +++ GY P       + ++ EKEV+L  HSEKLA+AF  
Sbjct: 530 GDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAF 589

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           L+LP G  IRV KNLRVC DCH   K MSK   REIV+RD +RFHHFKDG+CSC  +W
Sbjct: 590 LSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/495 (23%), Positives = 209/495 (42%), Gaps = 56/495 (11%)

Query: 51  ISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLK 110
           +++S  K L     N   +I R C  G +++A+   +  E    +   +  I + C  L 
Sbjct: 1   MASSALKNLATGRPNGREDIIRLCSTGRVKEALHRRFR-EGLWSEPGLFSHIFRACQALP 59

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
            L   +++H+    SG   D     + L+  +   GD    R +F +I    V  WN+L+
Sbjct: 60  LL---RQLHAFAATSGAAADR-FTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILI 115

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR 230
             Y K G+                                      ++ A KLFDE+  R
Sbjct: 116 GGYVKNGD--------------------------------------LETARKLFDEMPAR 137

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           +V +WN M++G   +G+ E+ L  F  M   G   D   + ++   CA    ++ GR VH
Sbjct: 138 NVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVH 197

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
           A+ +++   +++   ++L  MY +CG L         +   ++VS  + I+G  + G  +
Sbjct: 198 AYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAE 257

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
           GA+  F  M   G+E +     S + +C+    L  G+ +H    +  +   + V  +L+
Sbjct: 258 GALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLV 317

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGV 459
            MY++CG + D+E V  +    D+V  + MI           A+ LF  M+    EP+ V
Sbjct: 318 HMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEV 377

Query: 460 TMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           T   +L AC+     + G      + + +G+         IVD+  + G L  A  L   
Sbjct: 378 TFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILS 437

Query: 519 IPAK-DLISWTIMIA 532
           +P + D + W  +++
Sbjct: 438 MPVQPDGVIWKTLLS 452



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 185/410 (45%), Gaps = 39/410 (9%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           + I R C+   L + +    ++  +  D  T   +L   ADL      + +   I +  +
Sbjct: 49  SHIFRACQALPLLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNV 108

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
           +  + ++G      +V  GDL+  R++F+++    V  WN ++   + +G  +ESL  F 
Sbjct: 109 MSWNILIGG-----YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFF 163

Query: 188 KMQSLGIAADSYTFSCVLKCLA------------------------VVGNSRR------- 216
            M+  G+  D Y    + +C A                         VG+S         
Sbjct: 164 AMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG 223

Query: 217 -VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
            ++D       L   ++VS N  ISG   NG AE  LE F  M   G   +  T V+ ++
Sbjct: 224 FLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVT 283

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C++  AL  G+ +HA A+K    K +    +L+ MYS+CG L  + RV  +     +V 
Sbjct: 284 SCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVL 343

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI- 394
            ++MI+ Y   G    A+ LF+ M+  G EP+     ++L+AC+  GL + G +  + + 
Sbjct: 344 CSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMT 403

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           K   +Q S+     ++D+  + G + +AE +   MPV+ D V W T++ A
Sbjct: 404 KTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 453



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 7/125 (5%)

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           I  AC +L  L   R++H +    G +ADR  AN ++  Y   G    AR LF+ IP ++
Sbjct: 51  IFRACQALPLL---RQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRN 107

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           ++SW I+I GY  +G    A   F++M    +     ++ +++   ++SGL +E   FF 
Sbjct: 108 VMSWNILIGGYVKNGDLETARKLFDEMPARNV----ATWNAMVAGLTNSGLNEESLGFFF 163

Query: 584 MMRYE 588
            MR E
Sbjct: 164 AMRRE 168


>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
 gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
          Length = 739

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/687 (35%), Positives = 386/687 (56%), Gaps = 50/687 (7%)

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +M + G+ AD+Y  + +++     G   R   A   FD ++ ++V SW  +IS +  NG 
Sbjct: 59  RMIAQGLDADTYLGNNLVRVYGKFGGLDR---AWAAFDRIAAKNVFSWTIVISAFAQNGH 115

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
             + L +F++M   G   +  T+  VL  C++   L  GR++H   + A   K++   N 
Sbjct: 116 HREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAA--KKDVVIGNA 173

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L++MYSKCG L  A   F++M  R VVSWT+MI   +  G ++ A+ +F  MV E + P+
Sbjct: 174 LVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSENVAPN 233

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKEN--DMQSSLYVSNALMDMYAKCGSMADAESV 425
             +  ++L AC+  G     + +H++I     ++   L V+N L+  Y +CGS +DA  V
Sbjct: 234 EISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARRV 293

Query: 426 FN--QMPVKDIVSWNTMIGA----------LDLFVAMLQNFEP---DGVTMACILPACAS 470
           F+  Q   ++ VSW +MI A          ++L+  M+Q  E    D V   C+L AC+S
Sbjct: 294 FDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLCVLEACSS 353

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           L+AL+ GR++H  I+  G   +  +A AIV+MY KCG LV AR +FD + A+++I+W  M
Sbjct: 354 LSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNMIAWNSM 413

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           + GY  HG    A+  F      G+ PDE++F+++L ACSH+G+V  G   F  +R +  
Sbjct: 414 MGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVWHFGSIRADFG 473

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV----APDATIWGSLLCGCRIHHEVKLA 646
           +EP ++HY CMVD+L R G L  A R +E MP     A +   W +LL  C++H +VK A
Sbjct: 474 MEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLASCKVHTDVKRA 533

Query: 647 EKVAE-----------------HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISR 689
            +++                    + L+ ++    V+L+N+YA+A+KWEE+  +R +I+ 
Sbjct: 534 ARISSVLSAKKKKLLSSSSSGSGSWHLK-NSAAPLVMLSNIYAQAKKWEEMTGVRNEITE 592

Query: 690 RGLK-----KNPGCSWIEIKGKVNIFVAGG-SSHPHAKKIESLLKRLRLEMKREGYFPKT 743
              K     +  GCS+IE++G ++ FVAG    HP  K I+S +KRL   +K  GY P T
Sbjct: 593 EWSKGMITSRQRGCSFIEVEGAIHEFVAGKLHLHPEHKGIDSEMKRLEELIKSAGYVPDT 652

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              + + +E EKE  L  HSE++A+AFG++   +   +RV  NLR+C DCH   K +SKT
Sbjct: 653 SVVMHDVEEAEKEGVLHQHSERMAIAFGLMRGGSDTIVRVVNNLRICSDCHAAVKLISKT 712

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             REI++RD+ RFHHF  G CSC+ +W
Sbjct: 713 VGREILVRDTRRFHHFASGECSCQDYW 739



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 221/461 (47%), Gaps = 55/461 (11%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D  LG+ LV ++   G L      F++I    VF W +++  +++ G+ +E+L LF++M+
Sbjct: 68  DTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQNGHHREALVLFRQME 127

Query: 191 SLGIAADSYTFSCVL------KCLA----------------VVGNS--------RRVKDA 220
             G+ A+  T + VL      K LA                V+GN+          +++A
Sbjct: 128 REGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAKKDVVIGNALVNMYSKCGSLREA 187

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
              F E+  RDVVSW  MI+    +G   + +E+F EM++     +  + + VL  C+N 
Sbjct: 188 RASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSENVAPNEISCLAVLGACSNL 247

Query: 281 GALMFGRAVHAFALKACFS--KEISFNNTLLDMYSKCGDLDGAIRVFEKM--GERSVVSW 336
           G     R +H F         K++   NTL+  Y +CG    A RVF+ +    R+ VSW
Sbjct: 248 GDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARRVFDSLQHSARNAVSW 307

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVR--EGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
            SMIA Y         + L++ M++  E  + D  A   +L AC+    L++G+ VH+ I
Sbjct: 308 ASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLCVLEACSSLSALKVGRQVHEEI 367

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
                   L ++ A+++MY KCGS+ +A  VF+ M  +++++WN+M+G          AL
Sbjct: 368 VAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNMIAWNSMMGGYTQHGHPKRAL 427

Query: 445 DLF-VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI--VD 501
            LF +A L    PD +T   IL AC+    ++ G    G I R     + +V + +  VD
Sbjct: 428 QLFELACLDGVLPDEITFVTILTACSHAGMVKPGVWHFGSI-RADFGMEPSVDHYVCMVD 486

Query: 502 MYVKCGVLVLARSLFDMI-----PAKDLISWTIMIAGYGMH 537
           M  + G L  A  L + +     PA + + W  ++A   +H
Sbjct: 487 MLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLASCKVH 527



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 199/420 (47%), Gaps = 49/420 (11%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I  F + G+  +A+ +    E+   K +  T  ++L +C+ +K L  G+ +H  +  +  
Sbjct: 107 ISAFAQNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAK- 165

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              D V+G+ LV M+  CG L+E R  F ++    V  W  ++   S+ G + E++ +F 
Sbjct: 166 --KDVVIGNALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFW 223

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVK----------------------------- 218
           +M S  +A +  +   VL   + +G+  +V+                             
Sbjct: 224 EMVSENVAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGR 283

Query: 219 -----DAHKLFDEL--SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL--GFNVDLAT 269
                DA ++FD L  S R+ VSW  MI+ Y +N  A+ G+E+++EM+       +D   
Sbjct: 284 CGSPSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVA 343

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            + VL  C++  AL  GR VH   + A F  E+     +++MY KCG L  A  VF+ M 
Sbjct: 344 YLCVLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMK 403

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            R++++W SM+ GY + G    A++LF     +G+ PD     +IL AC+  G+++ G  
Sbjct: 404 ARNMIAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVW 463

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQM-----PVKDIVSWNTMIGA 443
               I+ +  M+ S+     ++DM  + G +  AE +  +M     P  + V W  ++ +
Sbjct: 464 HFGSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLAS 523



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 12/182 (6%)

Query: 31  PSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSE 90
           PS    +  S  HS+      + S +  +   T N  A+ G       +E   E++   E
Sbjct: 287 PSDARRVFDSLQHSARN----AVSWASMIAAYTSNEQAKAG-------VELYQEMIQREE 335

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
             K+D   Y  +L+ C+ L +L+ G++VH  I  +G   D+  L   +V M+  CG L E
Sbjct: 336 SKKMDPVAYLCVLEACSSLSALKVGRQVHEEIVAAGFG-DELPLAGAIVNMYCKCGSLVE 394

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
            R VF+ +    +  WN +M  Y++ G+ K +L LF+     G+  D  TF  +L   + 
Sbjct: 395 AREVFDGMKARNMIAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSH 454

Query: 211 VG 212
            G
Sbjct: 455 AG 456



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 11/174 (6%)

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           LAA+E   E+H  ++  G+ AD  + N +V +Y K G L  A + FD I AK++ SWTI+
Sbjct: 50  LAAVE---ELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIV 106

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I+ +  +G   +A+  F  M + G++ +EV+  +VL  CS    +  G      +     
Sbjct: 107 ISAFAQNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRV----- 161

Query: 591 IEPKLEHYA--CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
           I  K +      +V++ S+ G+L EA    + M V  D   W +++     H E
Sbjct: 162 IAAKKDVVIGNALVNMYSKCGSLREARASFQEM-VVRDVVSWTTMITALSEHGE 214


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/584 (39%), Positives = 336/584 (57%), Gaps = 46/584 (7%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +HA  L+         N  L   Y+  G LD ++ VF    E +V S++++I  + +  +
Sbjct: 66  IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
           FD A   +  M+  G+EP+ +  +S+L +C+    LE GK +H    +  + S LYV   
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTG 181

Query: 409 LMDMYAKCGSMADAESVFNQMPVK-------------------------------DIVSW 437
           L+D+YA+ G +  A  +F++MP +                               D+V W
Sbjct: 182 LVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCW 241

Query: 438 NTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR 486
           N MIG          +L LF  ML     P+ VT+  +L AC  L ALE GR IH YI  
Sbjct: 242 NVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIEN 301

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
            GI  + +V  A++DMY KCG L  AR +FD I  KD+++W  MI GY MHGF   A+  
Sbjct: 302 KGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQL 361

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
           F +M + G +P +++FI +L AC H GLV+EG  FF +MR +  IEPK+EHY CMV+LL 
Sbjct: 362 FEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLG 421

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVL 666
           R G+L EAY  ++ M +A D  +WG+LL  CR+H  +KL E++A+ + + +  N+G YVL
Sbjct: 422 RAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVL 481

Query: 667 LANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESL 726
           L+N+YA    WE V K+R  +   G++K  GCS IE+  KV+ FVAG   HP +K+I  +
Sbjct: 482 LSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVM 541

Query: 727 LKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKN 786
           L  +   +K  GY P+T   L +  E +KE +L  HSEKLA+AFG+++   G T+++ KN
Sbjct: 542 LNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKN 601

Query: 787 LRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LRVC DCH + K +S+   R+IV+RD NRFHHF+DG CSC  +W
Sbjct: 602 LRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 180/400 (45%), Gaps = 62/400 (15%)

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLL 169
           KS+    ++H+ +   G+   + +L  KL   +   G L     VFN  D   VF ++ +
Sbjct: 58  KSVAHLLQIHASLLRRGLY-HNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAI 116

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-----------CLAV---VGNSR 215
           +H + ++  F  +   + +M S G+  +++TFS VLK           C A+   +G+  
Sbjct: 117 IHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDL 176

Query: 216 RVKD--------------AHKLFDE-------------------------------LSDR 230
            V+               A +LFD+                               + +R
Sbjct: 177 YVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKER 236

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           DVV WN MI GY  +GV  + L++F+ ML      +  T++ VLS C   GAL  GR +H
Sbjct: 237 DVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIH 296

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
           ++         +     L+DMYSKCG L+ A  VF+++ ++ VV+W SMI GYA  G   
Sbjct: 297 SYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQ 356

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNAL 409
            A++LF  M   G +P       IL AC   GL+E G+     +++   ++  +     +
Sbjct: 357 HALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCM 416

Query: 410 MDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGALDLFV 448
           +++  + G + +A  +   M +  D V W T++G   L V
Sbjct: 417 VNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHV 456


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/667 (36%), Positives = 368/667 (55%), Gaps = 53/667 (7%)

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN-LGFNVDLA-TMV 271
           +R + +AH++FD    R + +W  +ISG    G    G+  F EML+  G     A  + 
Sbjct: 71  ARGLHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLA 130

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD-------------- 317
            VL  CA  G +  GR +H + L++    ++   N +LDMY+KCGD              
Sbjct: 131 GVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQK 190

Query: 318 -----------------LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                            L GA ++F++   R V SW ++++G  R G    A+   + MV
Sbjct: 191 DATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMV 250

Query: 361 REGIEPDVYAITSILHACACDGLL---EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
           R G+    Y  + +    A  GLL   ++G+ +H  +    ++   +V  +LMDMY KCG
Sbjct: 251 RAGVTFSNYTYSMVF---ALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCG 307

Query: 418 SMADAESVFNQ---MPVKDIVSWNTMIG----------ALDLFVAMLQNFEPDG-VTMAC 463
            M  A S+F++          +W+TM+           AL+ F  ML+   P G   +  
Sbjct: 308 EMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTS 367

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           +  ACA+   +E+GR++HG++ + G   D  +A+AIVDMY K G L  A  +F     K+
Sbjct: 368 VASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKN 427

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           +  WT M+  Y  HG G  A+  F+ M+   I P+E++ ++VL ACSHSGLV +G+ +FN
Sbjct: 428 VALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFN 487

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
           +M+ E  I P  EHY CMVDL  R G L +A  FIE   ++ +A +W +LL  CR+H  +
Sbjct: 488 LMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHI 547

Query: 644 KLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
           + A+  +E + +LE  + G YVL++N+YA   KW +  KLR  +  R ++K PG SWI +
Sbjct: 548 EYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHL 607

Query: 704 KGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHS 763
           K  V+ FVA  +SHP + +I + L++L   +K  GY  +T   + + +E ++E +L  HS
Sbjct: 608 KNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHS 667

Query: 764 EKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGR 823
           EKLA+AFGI++ P G  +R+ KNLRVC DCHE  KF+++   REIV+RD  RFHHFKDG+
Sbjct: 668 EKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQ 727

Query: 824 CSCRGFW 830
           CSC  FW
Sbjct: 728 CSCEDFW 734



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 222/454 (48%), Gaps = 59/454 (12%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L+ CA L  +E G+++H  I  SG V  D VL + ++ M+  CGD    RR F  +   
Sbjct: 132 VLRCCAGLGDVESGRRIHGWILRSG-VCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQK 190

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
               WN+++    + G+                               +VG       A 
Sbjct: 191 DATSWNIVIRACLQDGD-------------------------------LVG-------AT 212

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG--FNVDLATMVTVLSGCAN 279
           +LFDE S RDV SWN ++SG + +G   + L   ++M+  G  F+    +MV  L+G  +
Sbjct: 213 QLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLS 272

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG---ERSVVSW 336
              L  GR +H   + A   ++     +L+DMY KCG+++ A+ +F++     E    +W
Sbjct: 273 SRDL--GRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAW 330

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           ++M+AGY + G  + A+  FR M+REG+    + +TS+  ACA  G++E G+ VH ++++
Sbjct: 331 STMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEK 390

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDL 446
              +    +++A++DMY+K GS+ DA  +F     K++  W TM+           AL++
Sbjct: 391 LGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEI 450

Query: 447 FVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYV 504
           F  M  +   P+ +T+  +L AC+    +  G      +   +GI  +    N +VD+Y 
Sbjct: 451 FSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYG 510

Query: 505 KCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
           + G+L  A++  +    + + + W  +++   +H
Sbjct: 511 RAGLLDKAKNFIEENKISHEAVVWKTLLSACRLH 544


>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Brachypodium distachyon]
          Length = 682

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/634 (36%), Positives = 361/634 (56%), Gaps = 14/634 (2%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           +A  G   R+  A ++FD +  R+ VS N ++SGY + G     L + K      F+++ 
Sbjct: 52  IAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDALALLKAA---DFSLNE 108

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
             + T LS  A+  +   GR  H +A+K+   +     N +L MY +C  ++ A++VFE 
Sbjct: 109 YVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFEN 168

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           +    + ++ SMI G+   G FDG+IR+ R MV E  + D  +  ++L  CA    L +G
Sbjct: 169 VSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLG 228

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
             VH    +  ++ ++YV +AL+DMY KC    DA S F  +P K++VSW  ++      
Sbjct: 229 CQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQN 288

Query: 442 ----GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL LF+ + ++   P+  T A  L +CA LAAL+ G  +    ++ G     +V 
Sbjct: 289 ERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVC 348

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           NA+++MY K G +  A  +F  +P +D++SW  +I GY  HG   +A+  F+DM  A I 
Sbjct: 349 NALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIV 408

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           P  V+F+ VL AC+  GLVDEG  + N+M  E  I+P  EHY CMV LL R G L EA +
Sbjct: 409 PSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQ 468

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
           FI    +  D   W SLL  C+++    L  +VAE + +L+P++ G YVLL+N+YA+A +
Sbjct: 469 FILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVGTYVLLSNMYAKANR 528

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           W+ V K+R+ +  RG++K PG SWI++  +V++F +   +H    +I   LK L  ++K 
Sbjct: 529 WDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDKNHKWINQITIKLKELIGQIKV 588

Query: 737 EGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
            GY P     L + +  +KE  L  HSEK+A+AFG+++ P G+TIR+ KNLR+C DCH  
Sbjct: 589 IGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGLIHSPEGETIRIMKNLRICDDCHVA 648

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            K +S   RR+IV+RD+ RFH   DG CSC  +W
Sbjct: 649 IKLISVVTRRKIVVRDTVRFHCIDDGVCSCDDYW 682



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 190/394 (48%), Gaps = 27/394 (6%)

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
           G L  G+A+HA  ++A     I  N+ L+  Y KCG L  A ++F+ M  R+ VS   ++
Sbjct: 25  GELCTGKAIHAQMIRAAHFDVIQHNH-LIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLM 83

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
           +GYA  G    A+ L +         + Y +++ L A A      +G+  H Y  ++ +Q
Sbjct: 84  SGYASAGRHSDALALLKA---ADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQ 140

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM 450
              YV NA++ MY +C  + DA  VF  +   DI ++N+MI          G++ +  +M
Sbjct: 141 EHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSM 200

Query: 451 LQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
           +   E  D V+   +L  CAS   L  G ++H   L+  +  +  V +A+VDMY KC   
Sbjct: 201 VGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCA 260

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             A S F+++P K+++SWT ++  Y  +    DA+  F D+   G+ P+E ++   L +C
Sbjct: 261 RDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSC 320

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           +    +  G    +    +      L     ++++ S++G++ +A+R    MP   D   
Sbjct: 321 AGLAALKNG-NALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMP-WRDVVS 378

Query: 630 WGSLLCGCRIH----------HEVKLAEKVAEHV 653
           W S++ G   H          H++ LAE V  +V
Sbjct: 379 WNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYV 412



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 161/388 (41%), Gaps = 77/388 (19%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ I  F ++G  + ++ ++ S   E  + D  +Y ++L  CA  K L  G +VH+   
Sbjct: 177 FNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQAL 236

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +  +   +  +GS LV M+  C   ++    F  +    V  W  +M  Y++   F+++L
Sbjct: 237 KRRLE-QNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDAL 295

Query: 184 YLFKKMQSLGIAADSYTFSCVLKC---LAVVGN--------------------------- 213
            LF  ++  G+  + +T++  L     LA + N                           
Sbjct: 296 QLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMY 355

Query: 214 --SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
             S  + DA ++F  +  RDVVSWN +I GY  +G+A + + VF +ML         T V
Sbjct: 356 SKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFV 415

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-E 330
            VL  CA  G +  G               + + N ++                ++MG +
Sbjct: 416 GVLLACAQLGLVDEG---------------LYYLNIMM----------------KEMGIK 444

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
                +T M+    R G  D A +    ++   I  DV A  S+L +C       +G  V
Sbjct: 445 PGREHYTCMVGLLCRAGRLDEAEQF---ILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRV 501

Query: 391 HDYI---KENDMQSSLYVSNALMDMYAK 415
            + I   K ND+ + + +SN    MYAK
Sbjct: 502 AEQILQLKPNDVGTYVLLSN----MYAK 525



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 31/311 (9%)

Query: 42  SHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCS 101
           +HS+  + P    +S T V      N    RF +   L   +E+    E  + +  TY  
Sbjct: 263 AHSAFEVLPEKNVVSWTAVMTAYTQNE---RFEDALQLFLDLEI----EGVRPNEFTYAV 315

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLG--SKLVFMFVTCGDLKEGRRVFNKID 159
            L  CA L +L++G  + +   ++G     G L   + L+ M+   G + +  RVF  + 
Sbjct: 316 ALNSCAGLAALKNGNALSASAMKTG---HWGALSVCNALMNMYSKSGSIHDAWRVFLSMP 372

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
              V  WN ++  Y+  G  +E++ +F  M    I     TF  VL   A +G    + D
Sbjct: 373 WRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLG----LVD 428

Query: 220 AHKLFDELSDRDV------VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
               +  +  +++        + CM+      G  +   E  + +L+     D+    ++
Sbjct: 429 EGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLD---EAEQFILSNCIGTDVVAWKSL 485

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           LS C        G  V A  +      ++     L +MY+K    DG ++V + M ER V
Sbjct: 486 LSSCQVYKNYGLGHRV-AEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGV 544

Query: 334 -----VSWTSM 339
                VSW  +
Sbjct: 545 RKEPGVSWIQV 555


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/659 (34%), Positives = 369/659 (55%), Gaps = 15/659 (2%)

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
           +L   +  LG  ++++  + ++   +V G+   V  A  +F+ +  +D+V W  ++S Y+
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGS---VDSARTVFEGILCKDIVVWAGIVSCYV 223

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            NG  E  L++   M   GF  +  T  T L      GA  F + VH   LK C+  +  
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               LL +Y++ GD+  A +VF +M +  VV W+ MIA + + G  + A+ LF  M    
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           + P+ + ++SIL+ CA      +G+ +H  + +      +YVSNAL+D+YAKC  M  A 
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLA 472
            +F ++  K+ VSWNT+I           A  +F   L+N      VT +  L ACASLA
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           +++ G ++HG  ++   +    V+N+++DMY KCG +  A+S+F+ +   D+ SW  +I+
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           GY  HG G  A+   + M+    +P+ ++F+ VL  CS++GL+D+G   F  M  +  IE
Sbjct: 524 GYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIE 583

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P LEHY CMV LL R+G L +A + IE +P  P   IW ++L      +  + A + AE 
Sbjct: 584 PCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEE 643

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           + ++ P +   YVL++N+YA A++W  V  +R+ +   G+KK PG SWIE +G V+ F  
Sbjct: 644 ILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSV 703

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G S HP  K I  +L+ L ++  R GY P     L++ D+ EK+  L  HSE+LA+A+G+
Sbjct: 704 GLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGL 763

Query: 773 LNLPAGQT-IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           + +P+ +  I + KNLR+C DCH   K +S   +R++V+RD NRFHHF  G CSC   W
Sbjct: 764 VRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 232/496 (46%), Gaps = 49/496 (9%)

Query: 86  LYSS---EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
           LYS    E  +++   + S L+L   L   E    +HS I + G    +  +G+ L+  +
Sbjct: 133 LYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLG-YDSNAFVGAALINAY 191

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
             CG +   R VF  I    + +W  ++  Y + G F++SL L   M+  G   ++YTF 
Sbjct: 192 SVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFD 251

Query: 203 CVLKC--------------------------------LAVVGNSRRVKDAHKLFDELSDR 230
             LK                                 L +      + DA K+F+E+   
Sbjct: 252 TALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN 311

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           DVV W+ MI+ +  NG   + +++F  M       +  T+ ++L+GCA       G  +H
Sbjct: 312 DVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLH 371

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
              +K  F  +I  +N L+D+Y+KC  +D A+++F ++  ++ VSW ++I GY   G   
Sbjct: 372 GLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGG 431

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A  +FR  +R  +       +S L ACA    +++G  VH    + +    + VSN+L+
Sbjct: 432 KAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLI 491

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGV 459
           DMYAKCG +  A+SVFN+M   D+ SWN +I           AL +   M  ++ +P+G+
Sbjct: 492 DMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGL 551

Query: 460 TMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           T   +L  C++   +++G+E    ++R HGI         +V +  + G L  A  L + 
Sbjct: 552 TFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEG 611

Query: 519 IPAK-DLISWTIMIAG 533
           IP +  ++ W  M++ 
Sbjct: 612 IPYEPSVMIWRAMLSA 627



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 203/435 (46%), Gaps = 19/435 (4%)

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           KDA  LFDE+ +R+ VS+  +  GY      +  + ++  +   G  ++     + L   
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGY----ACQDPIGLYSRLHREGHELNPHVFTSFLKLF 156

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
            +         +H+  +K  +         L++ YS CG +D A  VFE +  + +V W 
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
            +++ Y   G F+ +++L   M   G  P+ Y   + L A    G  +  K VH  I + 
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
                  V   L+ +Y + G M+DA  VFN+MP  D+V W+ MI           A+DLF
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336

Query: 448 VAMLQNF-EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
           + M + F  P+  T++ IL  CA       G ++HG +++ G   D  V+NA++D+Y KC
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             +  A  LF  + +K+ +SW  +I GY   G G  A + F +  +  +   EV+F S L
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEMMPVAP 625
            AC+    +D G +   +   + N   K+     ++D+ ++ G++  A   F EM  +  
Sbjct: 457 GACASLASMDLGVQVHGLA-IKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI-- 513

Query: 626 DATIWGSLLCGCRIH 640
           D   W +L+ G   H
Sbjct: 514 DVASWNALISGYSTH 528



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 145/296 (48%), Gaps = 15/296 (5%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
            +A+H   LK     ++   N LL+ Y K G    A+ +F++M ER+ VS+ ++  GYA 
Sbjct: 68  AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC 127

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
           +      I L+  + REG E + +  TS L         EI   +H  I +    S+ +V
Sbjct: 128 QD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFV 183

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNF 454
             AL++ Y+ CGS+  A +VF  +  KDIV W  ++           +L L   M +  F
Sbjct: 184 GAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGF 243

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            P+  T    L A   L A +  + +HG IL+     D  V   ++ +Y + G +  A  
Sbjct: 244 MPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFK 303

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
           +F+ +P  D++ W+ MIA +  +GF  +A+  F  MR+A + P+E +  S+L  C+
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/637 (36%), Positives = 365/637 (57%), Gaps = 24/637 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++ AHK+FD L  R+V +W  +++GY+ N      L++F +ML  G      T+  VL+ 
Sbjct: 115 MESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNA 174

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C++  ++ FG+ VHA+ +K     + S  N+L   YSK   L+ AI+ F+ + E+ V+SW
Sbjct: 175 CSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISW 234

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           TS+I+     G    ++  F  M+ +G++P+ Y +TS+L AC     L++G  +H    +
Sbjct: 235 TSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIK 294

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----LDLF----- 447
               SS+ + N++M +Y KCG + +A+ +F  M   ++V+WN MI      +DL      
Sbjct: 295 LGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVA 354

Query: 448 --------VAMLQNF-----EPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                   +AM Q       +PD  T + +L  C++L ALE+G +IHG I++ G+ AD  
Sbjct: 355 AHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVV 414

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V  A+V MY KCG +  A   F  +P++ +ISWT MI G+  HG    A+  F DMR  G
Sbjct: 415 VGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVG 474

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           I+P++V+F+ VL ACSH+GL DE   +F +M+ + NI+P ++H+AC++D+  R G + EA
Sbjct: 475 IKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEA 534

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           +  +  M   P+ TIW  L+ GCR H +  L    AE + +L+P +   YV L N++  A
Sbjct: 535 FDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISA 594

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +W++V K+R+ +    + K    SWI IK KV  F     SH  + ++  LL+ +  E+
Sbjct: 595 GRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEV 654

Query: 735 KREGYFPKTRYALINADEMEKEV--ALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
           K  GY P     +I  +E E+ V  +   HSEKLA+AFG+LNLP    IRV K++ +C D
Sbjct: 655 KALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRD 714

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           CH   +F+S    REIV+RDS + H F +G CSC G+
Sbjct: 715 CHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 751



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 240/506 (47%), Gaps = 63/506 (12%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           ++I++  Y  +LQ C D     + + +H  I ++G   D  V+ + LV ++  CG ++  
Sbjct: 60  TRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVM-TFLVNVYSKCGVMESA 118

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CLAV 210
            +VF+ +    V  W  L+  Y +  +   +L LF KM   G    +YT   VL  C ++
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178

Query: 211 -----------------------VGNS--------RRVKDAHKLFDELSDRDVVSWNCMI 239
                                  +GNS        RR++ A K F  + ++DV+SW  +I
Sbjct: 179 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 238

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           S    NG A + L  F +ML+ G   +  T+ +VLS C     L  G  +H+ ++K  + 
Sbjct: 239 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYG 298

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR-----------EGV 348
             I   N+++ +Y KCG L  A ++FE M   ++V+W +MIAG+A+              
Sbjct: 299 SSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKS 358

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+ +F+ + R G++PD++  +S+L  C+    LE G+ +H  I ++ + + + V  A
Sbjct: 359 GSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTA 418

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPD 457
           L+ MY KCGS+  A   F +MP + ++SW +MI           AL LF  M L   +P+
Sbjct: 419 LVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPN 478

Query: 458 GVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLF 516
            VT   +L AC+     +        + + + I    +    ++DMY++ G +  A   F
Sbjct: 479 QVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEA---F 535

Query: 517 DMIPAKDL----ISWTIMIAGYGMHG 538
           D++   +       W+++IAG   HG
Sbjct: 536 DVVHKMNFEPNETIWSMLIAGCRSHG 561



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 205/405 (50%), Gaps = 30/405 (7%)

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
           LG  ++ +    +L  C +       R +H   +K  F +++     L+++YSKCG ++ 
Sbjct: 58  LGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMES 117

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A +VF+ +  R+V +WT+++ GY +      A++LF  M+  G  P  Y +  +L+AC+ 
Sbjct: 118 AHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSS 177

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              +E GK VH Y+ +  +     + N+L   Y+K   +  A   F  +  KD++SW ++
Sbjct: 178 LQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSV 237

Query: 441 IG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
           I           +L  F+ ML +  +P+  T+  +L AC  +  L+ G +IH   ++ G 
Sbjct: 238 ISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGY 297

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY-----------GMHG 538
            +   + N+I+ +Y+KCG L+ A+ LF+ +   +L++W  MIAG+             H 
Sbjct: 298 GSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHK 357

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
            G  A+A F  + ++G++PD  +F SVL  CS+   +++G +    +  +  +   +   
Sbjct: 358 SGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQI-IKSGVLADVVVG 416

Query: 599 ACMVDLLSRTGNLSEAYR-FIEMMPVAPDATI--WGSLLCGCRIH 640
             +V + ++ G++ +A + F+EM    P  T+  W S++ G   H
Sbjct: 417 TALVSMYNKCGSIDKASKAFLEM----PSRTMISWTSMITGFARH 457



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 155/342 (45%), Gaps = 66/342 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ + I   C+ G   +++       S+  K +  T  S+L  C  + +L+ G ++HS+ 
Sbjct: 233 SWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLS 292

Query: 123 CE----SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
            +    S I+I + ++     ++++ CG L E +++F  ++   +  WN ++  ++K  +
Sbjct: 293 IKLGYGSSILIKNSIM-----YLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMD 347

Query: 179 FKE-----------SLYLFKKMQSLGIAADSYTFSCVLKCLA------------------ 209
             E           +L +F+K+   G+  D +TFS VL   +                  
Sbjct: 348 LAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKS 407

Query: 210 ------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                 VVG +          +  A K F E+  R ++SW  MI+G+  +G++++ L++F
Sbjct: 408 GVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLF 467

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT------LL 309
           ++M  +G   +  T V VLS C++ G  +   A++ F L     K+ +          L+
Sbjct: 468 EDMRLVGIKPNQVTFVGVLSACSHAG--LADEALYYFEL---MQKQYNIKPVMDHFACLI 522

Query: 310 DMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFD 350
           DMY + G ++ A  V  KM  E +   W+ +IAG    G  D
Sbjct: 523 DMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSD 564


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/591 (36%), Positives = 340/591 (57%), Gaps = 13/591 (2%)

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           E    M   G + +     TVL+ C    A+  G+ VHA  +K  +   +     L+  Y
Sbjct: 44  EALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFY 103

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
            KC  L  A  VF+ M ER+VVSWT+MI+ Y++ G    A+ LF  M+R G EP+ +   
Sbjct: 104 VKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFA 163

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           ++L +C       +G+ +H +I + + ++ +YV ++L+DMYAK G + +A  +F  +P +
Sbjct: 164 TVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPER 223

Query: 433 DIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIH 481
           D+VS   +I           AL+LF  +  +  + + VT   +L A + LAAL+ G+++H
Sbjct: 224 DVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVH 283

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
            ++LR  + +   + N+++DMY KCG L  AR +FD +  + +ISW  M+ GY  HG G 
Sbjct: 284 NHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGR 343

Query: 542 DAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEGWR-FFNMMRYECNIEPKLEHYA 599
           + +  FN M  +  ++PD V+ ++VL  CSH GL D+G   F++M   + +++P  +HY 
Sbjct: 344 EVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYG 403

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           C+VD+L R G +  A+ F++ MP  P A IWG LL  C +H  + + E V   + ++EP+
Sbjct: 404 CVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPE 463

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           N G YV+L+N+YA A +WE+V+ LR  + ++ + K PG SWIE+   ++ F A   SHP 
Sbjct: 464 NAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPR 523

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
            +++ + ++ L    K  GY P     L + DE +KE  L  HSEKLA+ FG++  P   
Sbjct: 524 REEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESV 583

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            IRV KNLR+C DCH  AK+ SK   RE+ LRD NRFH    G+CSC  +W
Sbjct: 584 PIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 195/373 (52%), Gaps = 22/373 (5%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++DA  +FD + +R+VVSW  MIS Y   G A + L +F +ML  G   +  T  TVL+ 
Sbjct: 109 LRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTS 168

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C      + GR +H+  +K  +   +   ++LLDMY+K G +  A  +F+ + ER VVS 
Sbjct: 169 CIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSC 228

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T++I+GYA+ G+ + A+ LFR + REG++ +    TS+L A +    L+ GK VH+++  
Sbjct: 229 TAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLR 288

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDL 446
           +++ S + + N+L+DMY+KCG++  A  +F+ +  + ++SWN M+            L+L
Sbjct: 289 SEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLEL 348

Query: 447 FVAML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHG---ISADRNVANAIVD 501
           F  M+     +PD VT+  +L  C+     ++G +I  Y +  G   +  D      +VD
Sbjct: 349 FNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIF-YDMTSGKISVQPDSKHYGCVVD 407

Query: 502 MYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           M  + G +  A      +P +   + W  ++    +H    D I  F   +   IEP+  
Sbjct: 408 MLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHS-NLD-IGEFVGHQLLQIEPENA 465

Query: 561 S---FISVLYACS 570
                +S LYA +
Sbjct: 466 GNYVILSNLYASA 478



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 217/468 (46%), Gaps = 66/468 (14%)

Query: 94  IDT--KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           +DT  + Y ++L  C   +++ +G++VH+ + ++   +    L ++L+  +V C  L++ 
Sbjct: 54  LDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTH-YLPCVYLRTRLIVFYVKCDSLRDA 112

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-KCLA- 209
           R VF+ +    V  W  ++  YS+ G   ++L LF +M   G   + +TF+ VL  C+  
Sbjct: 113 RHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGS 172

Query: 210 ----------------------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMI 239
                                  VG+S         ++ +A  +F  L +RDVVS   +I
Sbjct: 173 SGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAII 232

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           SGY   G+ E+ LE+F+ +   G   +  T  +VL+  +   AL  G+ VH   L++   
Sbjct: 233 SGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVP 292

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
             +   N+L+DMYSKCG+L  A R+F+ + ER+V+SW +M+ GY++ G     + LF  M
Sbjct: 293 SYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLM 352

Query: 360 VREG-IEPDVYAITSILHACACDGLLEIGKDV-HDYIKEN-DMQSSLYVSNALMDMYAKC 416
           + E  ++PD   + ++L  C+  GL + G D+ +D       +Q        ++DM  + 
Sbjct: 353 IDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRA 412

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALER 476
           G +  A     +MP                       FEP      C+L AC+  + L+ 
Sbjct: 413 GRVEAAFEFVKKMP-----------------------FEPSAAIWGCLLGACSVHSNLDI 449

Query: 477 GREIHGYILRHGISADRNVANAIV--DMYVKCGVLVLARSLFDMIPAK 522
           G  +   +L+       N  N ++  ++Y   G     RSL +++  K
Sbjct: 450 GEFVGHQLLQ---IEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKK 494



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 11/200 (5%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICE 124
            A I  + ++G  E+A+E+    ++  + +   TY S+L   + L +L+ GK+VH+ +  
Sbjct: 229 TAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLR 288

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
           S  V    VL + L+ M+  CG+L   RR+F+ +    V  WN ++  YSK G  +E L 
Sbjct: 289 SE-VPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLE 347

Query: 185 LFKKM-QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSWNCM 238
           LF  M     +  DS T   VL   +  G   +  D    +D  S +     D   + C+
Sbjct: 348 LFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDI--FYDMTSGKISVQPDSKHYGCV 405

Query: 239 ISGYIANGVAEKGLEVFKEM 258
           +      G  E   E  K+M
Sbjct: 406 VDMLGRAGRVEAAFEFVKKM 425


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 247/727 (33%), Positives = 378/727 (51%), Gaps = 54/727 (7%)

Query: 142  FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
            + + GDL   + +F    +     W ++M  ++  G   ++L LF+ M   G+  D  T 
Sbjct: 298  YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTV 357

Query: 202  SCVLK---CLAVVGNSRRVK---DAH---------------------KLFDELSDRDVVS 234
            + VL    C     +   +K   D H                     ++F E+ D+D V+
Sbjct: 358  TTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVT 417

Query: 235  WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
            +N M+ G    G+  + L++F  M   G++     ++      +   +++          
Sbjct: 418  YNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVL---------- 467

Query: 295  KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
                   +  NN+LLD YSKC  LD   R+F++M ER  VS+  +IA YA        +R
Sbjct: 468  ------NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLR 521

Query: 355  LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
            LFR M + G +  V    ++L        + IGK +H  +    + S   + NAL+DMY+
Sbjct: 522  LFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYS 581

Query: 415  KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMAC 463
            KCG +  A+S F+    K  +SW  +I           AL LF  M +    PD  T + 
Sbjct: 582  KCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSS 641

Query: 464  ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
            I+ A +SLA +  GR++H Y++R G  +     + +VDMY KCG L  A   FD +P ++
Sbjct: 642  IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 701

Query: 524  LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
             ISW  +I+ Y  +G   +AI  F  M   G  PD V+F+SVL ACSH+GL DE  ++F+
Sbjct: 702  SISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFH 761

Query: 584  MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
            +M+++ +I P  EHYAC++D L R G  S+  + +  MP   D  IW S+L  CRIH   
Sbjct: 762  LMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQ 821

Query: 644  KLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
            +LA   A+ +F +EP +   YV+L+N+YA A +WE+   +++ +  RG++K  G SW+EI
Sbjct: 822  ELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEI 881

Query: 704  KGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHS 763
            K K+  F +   + P   +I+  L RL  EM ++GY P    AL   D   K  +L  HS
Sbjct: 882  KQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHS 941

Query: 764  EKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGR 823
            E+LA+AF ++N PAG  IR+ KNL  C DCH + K +SK   R+I++RDS RFHHFKDG 
Sbjct: 942  ERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGV 1001

Query: 824  CSCRGFW 830
            CSC  +W
Sbjct: 1002 CSCGDYW 1008



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 256/542 (47%), Gaps = 78/542 (14%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
            ++ G L   R +F+++ +  +F  NL++  YS +G+   + +LF               
Sbjct: 267 LLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF--------------- 311

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                          +   H        R+  +W  M+  + A G     L +F+ ML  
Sbjct: 312 ---------------LSSPH--------RNATTWTIMMRAHAAAGRTSDALSLFRAMLGE 348

Query: 262 GFNVDLATMVTVLS--GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
           G   D  T+ TVL+  GC          ++H FA+K      +   NTLLD Y K G L 
Sbjct: 349 GVIPDRVTVTTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLA 401

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A RVF +M ++  V++ +M+ G ++EG+   A++LF  M R G           LH   
Sbjct: 402 AARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYS------RHPLH--- 452

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
              LL+     H   +   +  +++V+N+L+D Y+KC  + D   +F++MP +D VS+N 
Sbjct: 453 ---LLQYS---HSRSRSTSVL-NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNV 505

Query: 440 MIGA----------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           +I A          L LF  M +  F+   +  A +L    SL  +  G++IH  ++  G
Sbjct: 506 IIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLG 565

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
           ++++  + NA++DMY KCG+L  A+S F     K  ISWT +I GY  +G   +A+  F+
Sbjct: 566 LASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFS 625

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
           DMR+AG+ PD  +F S++ A S   ++  G +  + +      +  +   + +VD+ ++ 
Sbjct: 626 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL-IRSGYKSSVFSGSVLVDMYAKC 684

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVL 666
           G L EA R  + MP   ++  W +++     + E K A K+ E +      PD+  +  +
Sbjct: 685 GCLDEALRTFDEMPER-NSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSV 743

Query: 667 LA 668
           LA
Sbjct: 744 LA 745



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 148/324 (45%), Gaps = 41/324 (12%)

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
           G +V    LNLG    L+      SG  +    MF +  H         K I   N +L 
Sbjct: 252 GFDVLTYRLNLGLRSLLS------SGHLHRARAMFDQMPH---------KNIFSLNLILS 296

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
            YS  GDL  A  +F     R+  +WT M+  +A  G    A+ LFR M+ EG+ PD   
Sbjct: 297 AYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVT 356

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           +T++L+   C         +H +  +  + + ++V N L+D Y K G +A A  VF +M 
Sbjct: 357 VTTVLNLPGC-----TVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMH 411

Query: 431 VKDIVSWNTMIGALDLFVAMLQNFEPDGV-TMACILPACASLAALERGREIHGYILRHGI 489
            KD V++N          AM+     +G+ T A  L A    A   R   +H  +L++  
Sbjct: 412 DKDAVTYN----------AMMMGCSKEGLHTQALQLFAAMRRAGYSR-HPLH--LLQYSH 458

Query: 490 SADRN-------VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
           S  R+       V N+++D Y KC  L   R LFD +P +D +S+ ++IA Y  +     
Sbjct: 459 SRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAAT 518

Query: 543 AIATFNDMRQAGIEPDEVSFISVL 566
            +  F +M++ G +   + + ++L
Sbjct: 519 VLRLFREMQKLGFDRQVLPYATML 542



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 83/367 (22%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y ++L +   L  +  GK++H+ +   G+  +D +LG+ L+ M+  CG L   +  F+  
Sbjct: 538 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASED-LLGNALIDMYSKCGMLDAAKSNFSNR 596

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSR 215
                  W  L+  Y + G  +E+L LF  M+  G+  D  TFS ++K    LA++G  R
Sbjct: 597 SEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGR 656

Query: 216 RVK-----------------------------DAHKLFDELSDRDVVSWNCMISGYIANG 246
           ++                              +A + FDE+ +R+ +SWN +IS Y   G
Sbjct: 657 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 716

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
            A+  +++F+ ML+ GFN D  T ++VL+ C++ G                         
Sbjct: 717 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGL------------------------ 752

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTS----MIAGYAREGVFDGAIRLFRGMVR 361
                       D  ++ F  M  + S+  W      +I    R G F    ++   +V 
Sbjct: 753 -----------ADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKM---LVE 798

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYI---KENDMQSSLYVSNALMDMYAKCGS 418
              + D    TSILH+C   G  E+ +   D +   +  D    + +SN    +YA+ G 
Sbjct: 799 MPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSN----IYARAGQ 854

Query: 419 MADAESV 425
             DA  V
Sbjct: 855 WEDAACV 861



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 34/335 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I  + + G  E+A+++     ++  + D  T+ SI++  + L  +  G+++HS +
Sbjct: 603 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 662

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG        GS LV M+  CG L E  R F+++       WN ++  Y+  G  K +
Sbjct: 663 IRSGYK-SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNA 721

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNC 237
           + +F+ M   G   DS TF   L  LA   ++    +  K F  +  +  +S     + C
Sbjct: 722 IKMFEGMLHCGFNPDSVTF---LSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYAC 778

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I      G      +V K ++ + F  D     ++L  C   G     R V A  L   
Sbjct: 779 VIDTLGRVGCFS---QVQKMLVEMPFKADPIIWTSILHSCRIHGNQELAR-VAADKLFGM 834

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV-----VSWTSM---IAGYAREGVF 349
              + +    L ++Y++ G  + A  V + M +R V      SW  +   I  +A   + 
Sbjct: 835 EPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLT 894

Query: 350 DGAI--------RLFRGMVREGIEPDVYAITSILH 376
              I        RL++ M ++G +PD   IT  LH
Sbjct: 895 SPMIDEIKDELDRLYKEMDKQGYKPD---ITCALH 926


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/724 (32%), Positives = 390/724 (53%), Gaps = 46/724 (6%)

Query: 65  NYNAEIGRFCEVGNLEKA--MEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  +C+ G    +  + V  +      D  T   +L+ C  L+ L  G ++H++ 
Sbjct: 103 SWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVA 162

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G+ +D    GS LV M+  C  L++  R F+ +       W   +    +   +   
Sbjct: 163 VKTGLEMDVRA-GSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRG 221

Query: 183 LYLFKKMQSLGIAADSYTFSCVLK------CLA------------------VVGNS---- 214
           L LF +MQ LG+      ++ V +      CL+                  VVG +    
Sbjct: 222 LELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDV 281

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 + DA + F  L +  V + N M+ G +  G+  + L++F+ M   G   D+ ++
Sbjct: 282 YAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSL 341

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             V S CA     + G  VH  A+K+ F  ++   N +LD+Y KC  L  A  VF++M +
Sbjct: 342 SGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ 401

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R  VSW ++IA   +   ++  I     M+R G+EPD +   S+L ACA    LE G  V
Sbjct: 402 RDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVV 461

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL---- 446
           H    ++ +    +VS+ ++DMY KCG + +A+ + +++  +++VSWN++I    L    
Sbjct: 462 HGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQS 521

Query: 447 ------FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
                 F  ML    +PD  T A +L  CA+LA +E G++IHG I++  +  D  +++ +
Sbjct: 522 EEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTL 581

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY KCG +  +  +F+     D +SW  MI GY +HG G +A+  F  M+QA + P+ 
Sbjct: 582 VDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNH 641

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            +F++VL ACSH GL+D+G R+F +M     +EP+LEH+ACMVD+L R+    EA +FI 
Sbjct: 642 ATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIR 701

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP+  DA IW +LL  C+I  +V++AE  A +V  L+PD++  Y+LL+NVYAE+ KW +
Sbjct: 702 SMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVD 761

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V + R  + +  LKK PGCSWIE++ +++ F+AG   HP ++++  +L  L +EMK  GY
Sbjct: 762 VSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGY 821

Query: 740 FPKT 743
            P +
Sbjct: 822 EPAS 825



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 158/592 (26%), Positives = 267/592 (45%), Gaps = 66/592 (11%)

Query: 96  TKTYCSILQLCADL--KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           T T+  + QLCA     +L  G+  H+ +  SG  +    + + L+ M+  CG     R 
Sbjct: 2   TATFSHLYQLCAGAGRSALATGQAAHARMLVSGF-MPTTFVSNCLLQMYARCGGAAHARG 60

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VF+ + +     WN ++  Y+  G+              G AA                 
Sbjct: 61  VFDVMPHRDTVSWNTMLTAYAHAGD-------------TGAAA----------------- 90

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
                    LF  + D DVVSWN ++SGY   G+    + +  EM   G   D  T+  +
Sbjct: 91  --------SLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVL 142

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L  C     L  G  +HA A+K     ++   + L+DMY KC  L+ A+R F  MGER+ 
Sbjct: 143 LKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNS 202

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSW + IAG  +   +   + LF  M R G+     A  S+  +CA    L   + +H +
Sbjct: 203 VSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAH 262

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GA 443
             +N   +   V  A++D+YAK  S+ DA   F  +P   + + N M+           A
Sbjct: 263 AIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEA 322

Query: 444 LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           L LF  M ++    D V+++ +  ACA +    +G ++H   ++ G   D  V NAI+D+
Sbjct: 323 LQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDL 382

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KC  LV A  +F  +  +D +SW  +IA    +    D IA  N+M + G+EPD+ ++
Sbjct: 383 YGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTY 442

Query: 563 ISVLYACS-----HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
            SVL AC+       G V  G    + +  +  +       + +VD+  + G ++EA + 
Sbjct: 443 GSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVS------STVVDMYCKCGMITEAQKL 496

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDNTGYYVLL 667
            + +    +   W S++ G  ++ + + A+K    + ++  +PD+  Y  +L
Sbjct: 497 HDRIG-GQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVL 547


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/768 (31%), Positives = 388/768 (50%), Gaps = 87/768 (11%)

Query: 80  EKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
           E A+E+     S  +K    T   +LQ C  L++L +GK++H  +   G V +  +  S 
Sbjct: 214 EDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNS- 272

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           +V M+     L+  R  F+  ++     WN ++  Y+       +  L ++M+S G+  D
Sbjct: 273 IVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPD 332

Query: 198 SYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                                             +++WN ++SG++  G  E  L  F+ 
Sbjct: 333 ----------------------------------IITWNSLLSGHLLQGSYENVLTNFRS 358

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           + + GF  D  ++ + L      G    G+ +H + +++    ++    +L+D Y K   
Sbjct: 359 LQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDC 418

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           LD A  VF     +++ +W S+I+GY  +G+FD A +L   M                  
Sbjct: 419 LDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQM------------------ 460

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP----VKD 433
                            KE  ++  L   N+L+  Y+  G   +A +V N++       +
Sbjct: 461 -----------------KEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPN 503

Query: 434 IVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHG 482
           +VSW  MI           AL  F  M + N +P+  T+  +L ACA  + L+ G EIH 
Sbjct: 504 VVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHC 563

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
           + +RHG   D  +A A++DMY K G L +A  +F  I  K L  W  M+ GY ++G G +
Sbjct: 564 FSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEE 623

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
               F++MR+ G+ PD ++F ++L  C +SGLV +GW++F+ M+ + NI P +EHY+CMV
Sbjct: 624 VFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMV 683

Query: 603 DLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTG 662
           DLL + G L EA  FI  +P   DA+IWG++L  CR+H ++K+AE  A ++  LEP N+ 
Sbjct: 684 DLLGKAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLLRLEPYNSA 743

Query: 663 YYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKK 722
            Y L+ N+Y+  ++W +V++L+E ++  G+K     SWI++K  +++F   G SHP   +
Sbjct: 744 NYALMMNIYSTFDRWGDVERLKESMTALGVKIPNVWSWIQVKQTIHVFSTEGKSHPEEGE 803

Query: 723 IESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIR 782
           I   L +L  E+K+ GY         N D+ EKE  L  H+EKLAM +G++    G  IR
Sbjct: 804 IYFELYQLISEIKKLGYVLDINCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKTKGGSPIR 863

Query: 783 VTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           V KN R+C DCH  AK++S    REI LRD  RFHHF +G CSC+  W
Sbjct: 864 VVKNTRICHDCHTTAKYISLARNREIFLRDGGRFHHFMNGECSCKDRW 911



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 139/565 (24%), Positives = 241/565 (42%), Gaps = 72/565 (12%)

Query: 230 RDVVSWNCMISGYIA-NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           R+ + WN  I  + +  G + + L VFKE+ + G   D   +  VL  C     L  G  
Sbjct: 93  RNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGME 152

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VHA  +K  F  ++  +  L+++Y K   +DGA +VF++   +    W +++    R   
Sbjct: 153 VHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEK 212

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
           ++ A+ LFR M     +     I  +L AC     L  GK +H Y+      S+  + N+
Sbjct: 213 WEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNS 272

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-------- 450
           ++ MY++   +  A   F+     +  SWN++I          GA DL   M        
Sbjct: 273 IVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPD 332

Query: 451 --------------------------LQN--FEPDGVTMACILPACASLAALERGREIHG 482
                                     LQ+  F+PD  ++   L A   L     G+EIHG
Sbjct: 333 IITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHG 392

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
           YI+R  +  D  V  ++VD Y+K   L  A  +F     K++ +W  +I+GY   G   +
Sbjct: 393 YIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDN 452

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
           A    N M++ GI+PD V++ S++   S SG  +E     N ++    + P +  +  M+
Sbjct: 453 AEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIK-SLGLTPNVVSWTAMI 511

Query: 603 DLLSRTGNLSEAYRFIEMMP---VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP- 658
               +  N  +A +F   M    V P++T   +LL  C     +K+ E++  H F +   
Sbjct: 512 SGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEI--HCFSMRHG 569

Query: 659 --DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
             D+      L ++Y +  K     K+  ++ R   +K   C W       N  + G + 
Sbjct: 570 FLDDIYIATALIDMYGKGGKL----KVAHEVFRNIKEKTLPC-W-------NCMMMGYAI 617

Query: 717 HPHAKKIESLLKRLRLEMKREGYFP 741
           + H +++ +L      EM++ G  P
Sbjct: 618 YGHGEEVFTLFD----EMRKTGVRP 638



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 141/637 (22%), Positives = 260/637 (40%), Gaps = 129/637 (20%)

Query: 107 ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIW 166
            ++++L   +++H+ I +     +   +   ++  ++  GD +   +VF         +W
Sbjct: 39  GEIRTLNSVRELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLW 98

Query: 167 NLLMHEYSK-TGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CLAVVG------------ 212
           N  + E++   G+  E L +FK++   G+  DS   + VLK CLA++             
Sbjct: 99  NSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLV 158

Query: 213 -------------------NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
                                  +  A+++FDE   ++   WN ++   + +   E  LE
Sbjct: 159 KRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALE 218

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           +F+ M +        T+V +L  C    AL  G+ +H + ++       S  N+++ MYS
Sbjct: 219 LFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYS 278

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY---- 369
           +   L+ A   F+   + +  SW S+I+ YA     +GA  L + M   G++PD+     
Sbjct: 279 RNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNS 338

Query: 370 -------------------------------AITSILHACACDGLLEIGKDVHDYIKEND 398
                                          +ITS L A    G   +GK++H YI  + 
Sbjct: 339 LLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSK 398

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDG 458
           ++  +YV  +L+D Y K   +  AE VF+    K+I +WN++I                G
Sbjct: 399 LEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLIS---------------G 443

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
            T   +      L  L + +E        GI  D    N++V  Y   G    A ++ + 
Sbjct: 444 YTYKGLFDNAEKL--LNQMKE-------EGIKPDLVTWNSLVSGYSMSGRSEEALAVINR 494

Query: 519 IPA----KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           I +     +++SWT MI+G   +    DA+  F+ M++  ++P+  +  ++L AC+ S L
Sbjct: 495 IKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSL 554

Query: 575 VDEGWRF--FNM-------------------------MRYEC--NIEPK-LEHYACMVDL 604
           +  G     F+M                         + +E   NI+ K L  + CM+  
Sbjct: 555 LKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMG 614

Query: 605 LSRTGNLSEAYRFIEMMP---VAPDATIWGSLLCGCR 638
            +  G+  E +   + M    V PDA  + +LL GC+
Sbjct: 615 YAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCK 651



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 20/212 (9%)

Query: 47  TINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLC 106
           T N +S +   +  C+ +NY   +  F ++             E  K ++ T C++L+ C
Sbjct: 501 TPNVVSWTAMISGCCQNENYMDALQFFSQM-----------QEENVKPNSTTICTLLRAC 549

Query: 107 ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIW 166
           A    L+ G+++H      G  +DD  + + L+ M+   G LK    VF  I    +  W
Sbjct: 550 AGSSLLKIGEEIHCFSMRHGF-LDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCW 608

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE 226
           N +M  Y+  G+ +E   LF +M+  G+  D+ TF+ +   L+   NS  V D  K FD 
Sbjct: 609 NCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTAL---LSGCKNSGLVMDGWKYFDS 665

Query: 227 LS-----DRDVVSWNCMISGYIANGVAEKGLE 253
           +      +  +  ++CM+      G  ++ L+
Sbjct: 666 MKTDYNINPTIEHYSCMVDLLGKAGFLDEALD 697


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/565 (38%), Positives = 336/565 (59%), Gaps = 12/565 (2%)

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           ++C ++ +  A+HA  +K+    +    + L+ MY K G  + A R+F++M  R +VSW 
Sbjct: 150 SSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWN 209

Query: 338 SMIAGYAREGVFDGAIRLF-RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           S+++G +  G     +  F R     G +P+   + S++ ACA  G L+ GK +H  + +
Sbjct: 210 SLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVK 269

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDL 446
             M     V N+L++MY K G +  A  +F +MPV+ +VSWN+M+            +DL
Sbjct: 270 LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDL 329

Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M +    PD  TM  +L AC       +   IH YI R G +AD  +A A++++Y K
Sbjct: 330 FNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAK 389

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
            G L  +  +F+ I  +D I+WT M+AGY +H  G +AI  F+ M + G+E D V+F  +
Sbjct: 390 LGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHL 449

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L ACSHSGLV+EG ++F +M     +EP+L+HY+CMVDLL R+G L +AY  I+ MP+ P
Sbjct: 450 LSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEP 509

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
            + +WG+LL  CR++  V+L ++VAE +  L+P +   Y++L+N+Y+ A  W    K+R 
Sbjct: 510 SSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRX 569

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +  R L +NPGCS+IE   K++ FV G   HP + +I + L+ L  ++   G  PKT +
Sbjct: 570 LMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEF 629

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L + DE  K   +  HSEKLA+AFG+L   +G  + +TKNLR+CGDCH  AKF S   +
Sbjct: 630 VLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEK 689

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           R I++RDS RFHHF DG CSCR +W
Sbjct: 690 RTIIIRDSKRFHHFADGLCSCRDYW 714



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 185/398 (46%), Gaps = 57/398 (14%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           DG +G +LV M+   G  ++ +R+F+++ N  +  WN LM   S  G     L  F +M+
Sbjct: 173 DGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMR 232

Query: 191 S--------------------LGIAADSYTFSCVLKCLAVVGNSRRVKD----------- 219
           +                    +G   +  +   V+  L + G ++ V             
Sbjct: 233 TESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL 292

Query: 220 --AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
             A +LF+E+  R +VSWN M+  +  NG AEKG+++F  M   G N D ATMV +L  C
Sbjct: 293 DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRAC 352

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
            + G      ++HA+  +  F+ +I     LL++Y+K G L+ +  +FE++ +R  ++WT
Sbjct: 353 TDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWT 412

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE- 396
           +M+AGYA       AI+LF  MV+EG+E D    T +L AC+  GL+E GK   + + E 
Sbjct: 413 AMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEV 472

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEP 456
             ++  L   + ++D+  + G + DA  +   MP+                       EP
Sbjct: 473 YRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPM-----------------------EP 509

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  +L AC     +E G+E+   +L    S  RN
Sbjct: 510 SSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRN 547



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 165/318 (51%), Gaps = 17/318 (5%)

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSG 276
           +DA +LFDE+ +RD+VSWN ++SG    G     L  F  M    G   +  T+++V+S 
Sbjct: 191 EDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSA 250

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA  GAL  G+++H   +K   S +    N+L++MY K G LD A ++FE+M  RS+VSW
Sbjct: 251 CAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 310

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            SM+  +   G  +  + LF  M R GI PD   + ++L AC   GL    + +H YI  
Sbjct: 311 NSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHR 370

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
               + + ++ AL+++YAK G +  +E +F ++  +D ++W  M+           A+ L
Sbjct: 371 CGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKL 430

Query: 447 FVAML-QNFEPDGVTMACILPACASLAALERGR---EIHGYILRHGISADRNVANAIVDM 502
           F  M+ +  E D VT   +L AC+    +E G+   EI   + R  +    +  + +VD+
Sbjct: 431 FDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYR--VEPRLDHYSCMVDL 488

Query: 503 YVKCGVLVLARSLFDMIP 520
             + G L  A  L   +P
Sbjct: 489 LGRSGRLEDAYELIKSMP 506



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 9/206 (4%)

Query: 446 LFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           +F+  L N     D +  + +  A +S  ++     IH  +++    +D  + + +V MY
Sbjct: 126 VFLGKLHNSSLLADSIVQSLVF-AISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMY 184

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR-QAGIEPDEVSF 562
            K G    A+ LFD +P +DL+SW  +++G    G+    +  F  MR ++G +P+EV+ 
Sbjct: 185 FKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTL 244

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           +SV+ AC+  G +DEG     ++  +  +  K +    ++++  + G L  A +  E MP
Sbjct: 245 LSVVSACAXMGALDEGKSLHGVV-VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 303

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEK 648
           V    + W S++    IH+    AEK
Sbjct: 304 VRSLVS-WNSMVV---IHNHNGYAEK 325


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/637 (36%), Positives = 365/637 (57%), Gaps = 24/637 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++ AHK+FD L  R+V +W  +++GY+ N      L++F +ML  G      T+  VL+ 
Sbjct: 109 MESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNA 168

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C++  ++ FG+ VHA+ +K     + S  N+L   YSK   L+ AI+ F+ + E+ V+SW
Sbjct: 169 CSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISW 228

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           TS+I+     G    ++  F  M+ +G++P+ Y +TS+L AC     L++G  +H    +
Sbjct: 229 TSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIK 288

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----LDLF----- 447
               SS+ + N++M +Y KCG + +A+ +F  M   ++V+WN MI      +DL      
Sbjct: 289 LGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVA 348

Query: 448 --------VAMLQNF-----EPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                   +AM Q       +PD  T + +L  C++L ALE+G +IHG I++ G+ AD  
Sbjct: 349 AHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVV 408

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V  A+V MY KCG +  A   F  +P++ +ISWT MI G+  HG    A+  F DMR  G
Sbjct: 409 VGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVG 468

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           I+P++V+F+ VL ACSH+GL DE   +F +M+ + NI+P ++H+AC++D+  R G + EA
Sbjct: 469 IKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEA 528

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           +  +  M   P+ TIW  L+ GCR H +  L    AE + +L+P +   YV L N++  A
Sbjct: 529 FDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISA 588

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +W++V K+R+ +    + K    SWI IK KV  F     SH  + ++  LL+ +  E+
Sbjct: 589 GRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEV 648

Query: 735 KREGYFPKTRYALINADEMEKEV--ALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
           K  GY P     +I  +E E+ V  +   HSEKLA+AFG+LNLP    IRV K++ +C D
Sbjct: 649 KALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRD 708

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           CH   +F+S    REIV+RDS + H F +G CSC G+
Sbjct: 709 CHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 745



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 240/506 (47%), Gaps = 63/506 (12%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           ++I++  Y  +LQ C D     + + +H  I ++G   D  V+ + LV ++  CG ++  
Sbjct: 54  TRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVM-TFLVNVYSKCGVMESA 112

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CLAV 210
            +VF+ +    V  W  L+  Y +  +   +L LF KM   G    +YT   VL  C ++
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172

Query: 211 -----------------------VGNS--------RRVKDAHKLFDELSDRDVVSWNCMI 239
                                  +GNS        RR++ A K F  + ++DV+SW  +I
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 232

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           S    NG A + L  F +ML+ G   +  T+ +VLS C     L  G  +H+ ++K  + 
Sbjct: 233 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYG 292

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR-----------EGV 348
             I   N+++ +Y KCG L  A ++FE M   ++V+W +MIAG+A+              
Sbjct: 293 SSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKS 352

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+ +F+ + R G++PD++  +S+L  C+    LE G+ +H  I ++ + + + V  A
Sbjct: 353 GSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTA 412

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPD 457
           L+ MY KCGS+  A   F +MP + ++SW +MI           AL LF  M L   +P+
Sbjct: 413 LVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPN 472

Query: 458 GVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLF 516
            VT   +L AC+     +        + + + I    +    ++DMY++ G +  A   F
Sbjct: 473 QVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEA---F 529

Query: 517 DMIPAKDL----ISWTIMIAGYGMHG 538
           D++   +       W+++IAG   HG
Sbjct: 530 DVVHKMNFEPNETIWSMLIAGCRSHG 555



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 205/405 (50%), Gaps = 30/405 (7%)

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
           LG  ++ +    +L  C +       R +H   +K  F +++     L+++YSKCG ++ 
Sbjct: 52  LGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMES 111

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A +VF+ +  R+V +WT+++ GY +      A++LF  M+  G  P  Y +  +L+AC+ 
Sbjct: 112 AHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSS 171

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              +E GK VH Y+ +  +     + N+L   Y+K   +  A   F  +  KD++SW ++
Sbjct: 172 LQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSV 231

Query: 441 IG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
           I           +L  F+ ML +  +P+  T+  +L AC  +  L+ G +IH   ++ G 
Sbjct: 232 ISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGY 291

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY-----------GMHG 538
            +   + N+I+ +Y+KCG L+ A+ LF+ +   +L++W  MIAG+             H 
Sbjct: 292 GSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHK 351

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
            G  A+A F  + ++G++PD  +F SVL  CS+   +++G +    +  +  +   +   
Sbjct: 352 SGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQI-IKSGVLADVVVG 410

Query: 599 ACMVDLLSRTGNLSEAYR-FIEMMPVAPDATI--WGSLLCGCRIH 640
             +V + ++ G++ +A + F+EM    P  T+  W S++ G   H
Sbjct: 411 TALVSMYNKCGSIDKASKAFLEM----PSRTMISWTSMITGFARH 451



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 155/342 (45%), Gaps = 66/342 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ + I   C+ G   +++       S+  K +  T  S+L  C  + +L+ G ++HS+ 
Sbjct: 227 SWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLS 286

Query: 123 CE----SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
            +    S I+I + ++     ++++ CG L E +++F  ++   +  WN ++  ++K  +
Sbjct: 287 IKLGYGSSILIKNSIM-----YLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMD 341

Query: 179 FKE-----------SLYLFKKMQSLGIAADSYTFSCVLKCLA------------------ 209
             E           +L +F+K+   G+  D +TFS VL   +                  
Sbjct: 342 LAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKS 401

Query: 210 ------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                 VVG +          +  A K F E+  R ++SW  MI+G+  +G++++ L++F
Sbjct: 402 GVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLF 461

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT------LL 309
           ++M  +G   +  T V VLS C++ G  +   A++ F L     K+ +          L+
Sbjct: 462 EDMRLVGIKPNQVTFVGVLSACSHAG--LADEALYYFEL---MQKQYNIKPVMDHFACLI 516

Query: 310 DMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFD 350
           DMY + G ++ A  V  KM  E +   W+ +IAG    G  D
Sbjct: 517 DMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSD 558


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/634 (36%), Positives = 357/634 (56%), Gaps = 26/634 (4%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           +A K+FD L  R+VV W  +++GY+ N   E  +EVF +ML  G      T+   L+ C+
Sbjct: 33  NARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPSNFTLSIALNACS 92

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
           +  ++  G+  HAF +K   S + S  N L  +YSK G LD +++ F + GE+ V+SWT+
Sbjct: 93  SLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTT 152

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +I+     G     +RLF  M+ E +EP+ + +TS+L  C+     ++G  VH    +  
Sbjct: 153 IISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLG 212

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----ALDL----FVAM 450
            +S+L ++N+L+ +Y KCG + +A+++FN+M  K++++WN MI     A+DL    F A 
Sbjct: 213 HESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQ 272

Query: 451 LQNFE--------------PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
               E              PD  T++ IL  C+ LAALE+G +IH   ++ G  +D  V 
Sbjct: 273 QTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVG 332

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
            A+VDMY KCG +  AR  F  +  + LISWT MI  +  HG    A+  F DMR AG  
Sbjct: 333 TALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFR 392

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           P++++F+ VL ACSH+G+VDE   +F +M+ E  I+P ++HY C+VD+  R G L EA+ 
Sbjct: 393 PNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFD 452

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
            I+ M V P+  IW  L+ GCR H   +L    AE + +L+P +T  YV+L N+Y  AE+
Sbjct: 453 VIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTETYVVLLNMYISAER 512

Query: 677 WEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           WE+V  +R  +    + K    S I IKG+V+ F      H H  ++ +LL  L    K 
Sbjct: 513 WEDVSMVRRLMKEEKVGKLKDWSRISIKGEVHSFKTNNRLHNHNAELHTLLNDLVDRAKS 572

Query: 737 EGYFPKTRYALINADEMEKEV----ALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
            GY       +I+ +E E E     +   HSEKLA+ FG+LN P G  IRV K++ +C D
Sbjct: 573 LGYEQLENMEVIDDEEEEAEEKAFSSAVYHSEKLAVTFGLLNTPIGAPIRVIKSVTMCKD 632

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           CH+  K +S    R I+++D  R H F +G+CSC
Sbjct: 633 CHDFMKVVSSQTTRHIIIKDGKRLHKFVNGQCSC 666



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 219/480 (45%), Gaps = 63/480 (13%)

Query: 118 VHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
           VH+ + ++G   ++  + S LV ++  CG +   R+VF+ +    V +W  LM  Y +  
Sbjct: 2   VHAHVIKTG-THEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH---------------- 221
             + ++ +F  M   G    ++T S  L   + + +    K  H                
Sbjct: 61  QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGN 120

Query: 222 ----------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                           K F E  ++DV+SW  +IS    NG A  GL +F EML      
Sbjct: 121 ALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEP 180

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +  T+ +VLS C+   +   G  VH+ + K      +   N+L+ +Y KCG +D A  +F
Sbjct: 181 NDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLF 240

Query: 326 EKMGERSVVSWTSMIAGYAR-----------EGVFDGAIRLFRGMVREGIEPDVYAITSI 374
            +M  +++++W +MIAG+A+           +     A+ ++  + R G +PD++ ++SI
Sbjct: 241 NRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSI 300

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L  C+    LE G+ +H    ++   S + V  AL+DMY KCGS+  A   F  M  + +
Sbjct: 301 LTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTL 360

Query: 435 VSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGY 483
           +SW +MI           AL LF  M L  F P+ +T   +L AC+    ++   E    
Sbjct: 361 ISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEI 420

Query: 484 ILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL----ISWTIMIAGYGMHG 538
           + + + I    +    +VDM+V+ G L  A   FD+I   D+      W ++IAG   HG
Sbjct: 421 MQKEYKIKPVMDHYGCLVDMFVRLGRLDEA---FDVIKRMDVEPNEFIWLLLIAGCRNHG 477



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 167/312 (53%), Gaps = 22/312 (7%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VHA  +K    +E    + L+++Y+KCG +  A +VF+ +  R+VV WT+++ GY +   
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
            + A+ +F  M+  G  P  + ++  L+AC+    + +GK  H +I +  +     + NA
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNFEPD 457
           L  +Y+K GS+  +   F +   KD++SW T+I A          L LF+ ML +N EP+
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
             T+  +L  C+++ + + G ++H    + G  ++  + N++V +Y+KCG +  A++LF+
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 518 MIPAKDLISWTIMIAGYGM-----------HGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
            +  K+LI+W  MIAG+                G +A+  +  + ++G +PD  +  S+L
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 567 YACSHSGLVDEG 578
             CS    +++G
Sbjct: 302 TVCSRLAALEQG 313



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 56/300 (18%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  S+L LC+ ++S + G +VHS+  + G   +  +  S LV++++ CG + E + +FN+
Sbjct: 184 TLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNS-LVYLYLKCGCIDEAKNLFNR 242

Query: 158 IDNGKVFIWNLLMHEYSKT-----GNFK------ESLYLFKKMQSLGIAADSYTFSCVLK 206
           ++   +  WN ++  +++       NF       E+L ++ K+   G   D +T S +L 
Sbjct: 243 MEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILT 302

Query: 207 CLA------------------------VVGNSR--------RVKDAHKLFDELSDRDVVS 234
             +                        VVG +          ++ A K F ++S R ++S
Sbjct: 303 VCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLIS 362

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           W  MI+ +  +G ++  L++F++M   GF  +  T V VL+ C++ G  M   A+  F +
Sbjct: 363 WTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAG--MVDEALEYFEI 420

Query: 295 KACFSKEISFNNT------LLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREG 347
                KE            L+DM+ + G LD A  V ++M  E +   W  +IAG    G
Sbjct: 421 ---MQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHG 477



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 116/242 (47%), Gaps = 21/242 (8%)

Query: 47  TINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLC 106
           T N + A  ++ +     N++A+     + G     M +  +    K D  T  SIL +C
Sbjct: 250 TWNAMIAGHAQAMDLAKDNFSAQ-----QTGTEALGMYLKLNRSGRKPDLFTLSSILTVC 304

Query: 107 ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIW 166
           + L +LE G+++H+   +SG  + D V+G+ LV M+  CG ++  R+ F  +    +  W
Sbjct: 305 SRLAALEQGEQIHAQTIKSGF-LSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISW 363

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD- 225
             ++  +++ G  + +L LF+ M+  G   +  TF  V   LA   ++  V +A + F+ 
Sbjct: 364 TSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGV---LAACSHAGMVDEALEYFEI 420

Query: 226 ---ELSDRDVVS-WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL--SGCAN 279
              E   + V+  + C++  ++  G  ++  +V K M     +V+    + +L  +GC N
Sbjct: 421 MQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRM-----DVEPNEFIWLLLIAGCRN 475

Query: 280 CG 281
            G
Sbjct: 476 HG 477


>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1305

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/727 (34%), Positives = 381/727 (52%), Gaps = 116/727 (15%)

Query: 220  AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
            A+K+FDE+  RD ++WN ++   + +G  EK +++F+ M   G     +TMV +L  C+N
Sbjct: 579  ANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSN 638

Query: 280  CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
                  GR +H + L+  F   +S  N+L+ MYS+ G L+ + +VF  M +R++ SW S+
Sbjct: 639  KEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSI 698

Query: 340  IAGYAREGVFDGAIRLFRGMVREGIEPDV---------YA-------------------- 370
            ++ Y R G  D A+ L   M   G++PD+         YA                    
Sbjct: 699  VSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGL 758

Query: 371  ------ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC-------- 416
                  I+S+L A    GL+++GK +H Y+  N +   +YV   L+DMY K         
Sbjct: 759  KPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARM 818

Query: 417  -----------------------GSMADAESVFNQMPVKDI----VSWNTMIG------- 442
                                   G + +AE++ ++M  + I    V+WN+++        
Sbjct: 819  VFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGK 878

Query: 443  ---ALDLFVAMLQN-FEPDGVTMACILPAC-------------------------ASLAA 473
               AL +   M +N  EP+ V+   IL  C                         A++++
Sbjct: 879  TEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISS 938

Query: 474  LER----------GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
            L R          G+E+H + L++ ++ D +VA A+VDMY K G L  A  +F  I  K 
Sbjct: 939  LLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKP 998

Query: 524  LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
            L SW  MI GY M   G + IA FN M +AGIEPD ++F SVL  C +SGLV EGW++F+
Sbjct: 999  LASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFD 1058

Query: 584  MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
            +MR    + P +EH +CMV+LL R+G L EA+ FI  MP+ PDATIWG+ L  C+IH ++
Sbjct: 1059 LMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDL 1118

Query: 644  KLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
            +LAE   + +  LEP N+  Y+++ N+Y+   +W +V+++R  +S   ++     SWI+I
Sbjct: 1119 ELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWGDVERIRNSMSNNRVRVQDLWSWIQI 1178

Query: 704  KGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHS 763
               V+IF A G +HP   +I   L +L  EMK+ GY P TR    N  E EKE  L GH+
Sbjct: 1179 DQTVHIFYAEGKAHPDEGEIYFELYKLVSEMKKSGYMPDTRCIHQNVSESEKEKLLMGHT 1238

Query: 764  EKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGR 823
            EKLAM +G++       IRV KN  +C DCH +AK++S    REIVL++  R HHF+DG+
Sbjct: 1239 EKLAMTYGLIKKKGIAPIRVVKNTNLCSDCHTVAKYISVLRNREIVLQEGARVHHFRDGK 1298

Query: 824  CSCRGFW 830
            CSC   W
Sbjct: 1299 CSCNNSW 1305



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 212/461 (45%), Gaps = 54/461 (11%)

Query: 230 RDVVSWNCMISGYIANGVAE-KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           R+ VSW   +      GV + K LE F  + N G N D   +  V   CA       G  
Sbjct: 486 RNQVSWRDFLEKAEDFGVEKYKVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFT 545

Query: 289 VHAFALKACF-SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
           +H   +K    + +    + L+  Y +C  LD A ++F++M +R  ++W  ++    + G
Sbjct: 546 IHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSG 605

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
            ++ A++LFR M   G +     +  +L  C+       G+ +H Y+     +S++ + N
Sbjct: 606 NWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCN 665

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWN------TMIGALDLFVAMLQNFE-----P 456
           +L+ MY++ G +  +  VFN M  +++ SWN      T +G +D  + +L   E     P
Sbjct: 666 SLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKP 725

Query: 457 DGVTMACILPACAS-------LAALER----------------------------GREIH 481
           D VT   +L   AS       +A L+R                            G+ IH
Sbjct: 726 DIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIH 785

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
           GY++R+ +  D  V   ++DMY+K G L  AR +FDM+  K++++W  +I+G    G   
Sbjct: 786 GYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLK 845

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
           +A A  + M + GI+ + V++ S++   +  G  ++       M+ +  +EP +  +  +
Sbjct: 846 EAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMK-KNGVEPNVVSWTAI 904

Query: 602 VDLLSRTGNLSEAYR-FIEMMP--VAPDATIWGSLL--CGC 637
           +   S+ GN     + F++M    V+P++    SLL   GC
Sbjct: 905 LSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGC 945



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 128/593 (21%), Positives = 233/593 (39%), Gaps = 150/593 (25%)

Query: 95   DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
            D      + ++CA L     G  +H  + + G+   D  + S L+  +  C  L    ++
Sbjct: 523  DEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKI 582

Query: 155  FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----- 209
            F+++       WN ++    ++GN+++++ LF+ M+  G  A   T   +L+  +     
Sbjct: 583  FDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGF 642

Query: 210  -------------------------VVGNSR--RVKDAHKLFDELSDRDVVSWNCMISGY 242
                                     +V  SR  +++ + K+F+ + DR++ SWN ++S Y
Sbjct: 643  AQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSY 702

Query: 243  IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN----------------------- 279
               G  +  + +  EM   G   D+ T  ++LSG A+                       
Sbjct: 703  TRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNT 762

Query: 280  ------------CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
                         G +  G+A+H + ++     ++    TL+DMY K G L  A  VF+ 
Sbjct: 763  SSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDM 822

Query: 328  MGERSVVSWTSMI-----------------------------------AGYAREGVFDGA 352
            M E+++V+W S+I                                   +GYA  G  + A
Sbjct: 823  MDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKA 882

Query: 353  IRLFRGMVREGIEPDVYAITSILHACACDG------------------------------ 382
            + +   M + G+EP+V + T+IL  C+ +G                              
Sbjct: 883  LAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRI 942

Query: 383  -----LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
                 LL  GK+VH +  +N++    +V+ AL+DMYAK G +  A  +F  +  K + SW
Sbjct: 943  LGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASW 1002

Query: 438  NTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR 486
            N MI            + +F AML+   EPD +T   +L  C +   +  G +    +  
Sbjct: 1003 NCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRS 1062

Query: 487  H-GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
            H G+       + +V++  + G L  A      +P K D   W   ++   +H
Sbjct: 1063 HYGVIPTIEHCSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIH 1115



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 199/476 (41%), Gaps = 73/476 (15%)

Query: 288 AVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA----- 341
             HA  +K     E+ F +  L+  Y + G+   A  VF     R+ VSW   +      
Sbjct: 442 TTHARMMKLIDRFELEFISKCLITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDF 501

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD-YIKENDMQ 400
           G  +  V +  +RL      +G+  D   +  +   CA      +G  +H   IK     
Sbjct: 502 GVEKYKVLEEFVRL----QNKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDN 557

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM 450
           S   V +ALM  Y +C S+  A  +F++MP +D ++WN ++           A+ LF  M
Sbjct: 558 SDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVM 617

Query: 451 -LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
                +    TM  +L  C++     +GR+IHGY+LR G  ++ ++ N+++ MY + G L
Sbjct: 618 RFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKL 677

Query: 510 VLARSLFDMIPAK-----------------------------------DLISWTIMIAGY 534
             +R +F+ +  +                                   D+++W  +++GY
Sbjct: 678 ESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGY 737

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD-----EGWRFFNMMRYEC 589
                  DAIA    ++ AG++P+  S  S+L A    GLV       G+   N + Y+ 
Sbjct: 738 ASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDV 797

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            +E        ++D+  +TG L  A    +MM    +   W SL+ G      +K AE +
Sbjct: 798 YVE------TTLIDMYIKTGYLPYARMVFDMMD-EKNIVAWNSLISGLSYTGLLKEAEAL 850

Query: 650 AEHVFELE--PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
              + E E    N   +  L + YA   K E+   +  K+ + G++ N   SW  I
Sbjct: 851 ISRM-EKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNV-VSWTAI 904


>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
          Length = 773

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/538 (41%), Positives = 323/538 (60%), Gaps = 15/538 (2%)

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS---WTSMIAGYAREGVFDGAIRLFRGM 359
           +    L+ ++S CG +D A RVFE  GE   +    W +M  GY+R G    A+ L+  M
Sbjct: 109 TLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEM 168

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           V +  +   +A +  L AC+  G L  G+ VH  + +        V+NAL+ +Y++ G  
Sbjct: 169 VCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCF 228

Query: 420 ADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEP-----------DGVTMACILPAC 468
            +A  +F+ MP +++VSWN++I  L     + +  E              VT+  ILP C
Sbjct: 229 EEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVC 288

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A + AL  G+EIH  I++     D  V N++VDMY KCG +   R +F+ +  KDL SW 
Sbjct: 289 ARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWN 348

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            +I GY ++G   +A+ +F +M  +G  PD ++FI++L  CSH+GL D+G R F MM+ +
Sbjct: 349 TLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMD 408

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             I P +EHYAC+VD+L R G + EA   ++ MP  P  +IWGSLL  CR+H  V LAE 
Sbjct: 409 HGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEA 468

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
           VA+ +FELEP+N G YV+L+N+YA A  WE VK +RE + +RG+ K  GCSW++IK K++
Sbjct: 469 VAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIH 528

Query: 709 IFVAGGSSH-PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
            FVAGGS+   ++ + + + KRL   M+  GY P T   L +  E  + + +CGHSE+LA
Sbjct: 529 TFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLA 588

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCS 825
             F ++N  +G  IR+TKNLRVC DCH   K +SK   R IVLRD+NRFHHFKDG CS
Sbjct: 589 TMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCS 646



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/340 (33%), Positives = 170/340 (50%), Gaps = 18/340 (5%)

Query: 216 RVKDAHKLFD---ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           RV +A ++F+   E  D     W  M  GY  NG  ++ L ++ EM+     +       
Sbjct: 123 RVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSM 182

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
            L  C++ G L  GRAVHA  LKA    +   NN LL +YS+ G  + A+R+F+ M  R+
Sbjct: 183 ALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHRN 242

Query: 333 VVSWTSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           +VSW S+IAG  + EGVF+ AI  FR M  +G+      +T+IL  CA    L  GK++H
Sbjct: 243 LVSWNSLIAGLVKKEGVFE-AIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIH 301

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
             I ++  +    V N+L+DMYAKCG+M     VFN M  KD+ SWNT+I          
Sbjct: 302 AVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMT 361

Query: 443 -ALDLFVAML-QNFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANAI 499
            A++ F  M+   F PDG+T   +L  C+     + G R      + HGIS        +
Sbjct: 362 EAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACL 421

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
           VD+  + G +  A  +   +P K   S W  ++    +HG
Sbjct: 422 VDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHG 461



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 206/445 (46%), Gaps = 52/445 (11%)

Query: 51  ISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYS----SEKSKIDTKTYCSILQLC 106
           I+A+ + T + K + +N+ +    + G L++A+ ++ S    S  +  D +     L  C
Sbjct: 18  ITATSAPTTLHKHRLHNSTLKSLSKSGKLDEALRLIESWPSKSPATAPDVEACALFLHSC 77

Query: 107 ADLKSLEDGKKVHSII------CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
              K+LE G++++  +      C   + +++  L  KL+ +F  CG + E RRVF   D 
Sbjct: 78  ISRKALEHGQRLYLQLLLYRDRCNHNL-LNNPTLKGKLITLFSVCGRVDEARRVFE--DG 134

Query: 161 GKVF-----IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR 215
           G+       +W  +   YS+ G  KE+L L+ +M        ++ FS  LK  + +G+ R
Sbjct: 135 GEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLR 194

Query: 216 RVKDAH--------------------------------KLFDELSDRDVVSWNCMISGYI 243
             +  H                                ++FD +  R++VSWN +I+G +
Sbjct: 195 TGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLV 254

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
                 + +E F+ M   G      T+ T+L  CA   AL  G+ +HA  +K+    +  
Sbjct: 255 KKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAP 314

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N+L+DMY+KCG +D   RVF  M  + + SW ++I GYA  G    A+  F+ M+  G
Sbjct: 315 VLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSG 374

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADA 422
             PD     ++L  C+  GL + G  + + +K ++ +  ++     L+D+  + G + +A
Sbjct: 375 FSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRIKEA 434

Query: 423 ESVFNQMPVKDIVS-WNTMIGALDL 446
             +   MP K   S W +++ +  L
Sbjct: 435 LEIVKNMPFKPTGSIWGSLLNSCRL 459



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 146/338 (43%), Gaps = 50/338 (14%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           L+ C+DL  L  G+ VH+ + ++     D V+ + L+ ++   G  +E  R+F+ + +  
Sbjct: 184 LKACSDLGDLRTGRAVHAQVLKA-TEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHRN 242

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH- 221
           +  WN L+    K     E++  F+ MQ  G+     T + +L   A V      K+ H 
Sbjct: 243 LVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHA 302

Query: 222 -------------------------------KLFDELSDRDVVSWNCMISGYIANGVAEK 250
                                          ++F+ +  +D+ SWN +I+GY  NG   +
Sbjct: 303 VIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTE 362

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLL 309
            +E F+EM+  GF+ D  T + +LSGC++ G    G R      +    S  +     L+
Sbjct: 363 AMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLV 422

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAGYAREGVFD----GAIRLFRGMVREGI 364
           D+  + G +  A+ + + M  +   S W S++      G        A RLF       +
Sbjct: 423 DVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFE------L 476

Query: 365 EPD---VYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           EP+    Y + S ++A A  G+ E  K V +++++  M
Sbjct: 477 EPNNAGNYVMLSNIYANA--GMWESVKVVREFMEKRGM 512



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 161/388 (41%), Gaps = 55/388 (14%)

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
            +N+ L   SK G LD A+R+ E        SW S     A                   
Sbjct: 32  LHNSTLKSLSKSGKLDEALRLIE--------SWPSKSPATA------------------- 64

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIK------ENDMQSSLYVSNALMDMYAKCG 417
             PDV A    LH+C     LE G+ ++  +        +++ ++  +   L+ +++ CG
Sbjct: 65  --PDVEACALFLHSCISRKALEHGQRLYLQLLLYRDRCNHNLLNNPTLKGKLITLFSVCG 122

Query: 418 SMADAESVF----NQMPVKDIVSWNTM-IG---------ALDLFVAMLQNFEPDG-VTMA 462
            + +A  VF      + + + V W  M IG         AL L+  M+  F   G    +
Sbjct: 123 RVDEARRVFEDGGEDVDLPESV-WVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFS 181

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
             L AC+ L  L  GR +H  +L+     D+ V NA++ +Y + G    A  +FD +P +
Sbjct: 182 MALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHR 241

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           +L+SW  +IAG        +AI  F  M+  G+    V+  ++L  C+    +  G +  
Sbjct: 242 NLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSG-KEI 300

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
           + +  +   +P       +VD+ ++ G +    R    M    D T W +L+ G  I+  
Sbjct: 301 HAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQ-GKDLTSWNTLITGYAINGR 359

Query: 643 VKLA-EKVAEHVFE-LEPDNTGYYVLLA 668
           +  A E   E +     PD   +  LL+
Sbjct: 360 MTEAMESFQEMICSGFSPDGITFIALLS 387



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 44/300 (14%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T  +IL +CA + +L  GK++H++I +S    D  VL S LV M+  CG +   RRVFN 
Sbjct: 280 TLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNS-LVDMYAKCGAMDYCRRVFNG 338

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +    +  WN L+  Y+  G   E++  F++M   G + D  TF  +L   +  G     
Sbjct: 339 MQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAG---LA 395

Query: 218 KDAHKLFDELS-----DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
            D  +LF+ +         V  + C++      G  ++ LE+ K   N+ F    +   +
Sbjct: 396 DDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVK---NMPFKPTGSIWGS 452

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNT-----LLDMYSKCGDLDGAIRVFEK 327
           +L+ C   G +    AV     K  F  E+  NN      L ++Y+  G  +    V E 
Sbjct: 453 LLNSCRLHGNVPLAEAV----AKRLF--ELEPNNAGNYVMLSNIYANAGMWESVKVVREF 506

Query: 328 MGERSVV-----SWT-------SMIAGYAREGVFDGAI-------RLFRGMVREGIEPDV 368
           M +R +      SW        + +AG + E  F  ++       RL   M   G  PD 
Sbjct: 507 MEKRGMTKEAGCSWLQIKSKIHTFVAGGSNE--FRNSVEYKKVWKRLMEAMEEVGYVPDT 564



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 766 LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           LA  F ++N  +G  IR+TKNL VC DCH   K +SK
Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSK 736


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/601 (36%), Positives = 361/601 (60%), Gaps = 34/601 (5%)

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN---- 305
           + ++    + + G   D AT   ++  C +       RAVH   L     + + FN    
Sbjct: 44  RAMKAMDSLQSHGLWADSATYSELIKCCIS------NRAVHEGNL---ICRHLYFNGHRP 94

Query: 306 -----NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                N L++MY K   L+ A ++F++M +R+V+SWT+MI+ Y++  +   A+ L   M+
Sbjct: 95  MMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML 154

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           R+ + P+VY  +S+L +C  +G+ ++ + +H  I +  ++S ++V +AL+D++AK G   
Sbjct: 155 RDNVRPNVYTYSSVLRSC--NGMSDV-RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPE 211

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACA 469
           DA SVF++M   D + WN++IG          AL+LF  M +  F  +  T+  +L AC 
Sbjct: 212 DALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 271

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            LA LE G + H +I+++    D  + NA+VDMY KCG L  A  +F+ +  +D+I+W+ 
Sbjct: 272 GLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           MI+G   +G+  +A+  F  M+ +G +P+ ++ + VL+ACSH+GL+++GW +F  M+   
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            I+P  EHY CM+DLL + G L +A + +  M   PDA  W +LL  CR+   + LAE  
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYA 449

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           A+ V  L+P++ G Y LL+N+YA ++KW+ V+++R ++  RG+KK PGCSWIE+  +++ 
Sbjct: 450 AKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHA 509

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F+ G +SHP   ++   L +L   +   GY P+T + L + +  + E +L  HSEKLA+A
Sbjct: 510 FIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALA 569

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           FG++ LP  + IR+ KNLR+CGDCH   K  SK   R IV+R   R+HHF+DG+CSC  +
Sbjct: 570 FGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDY 629

Query: 830 W 830
           W
Sbjct: 630 W 630



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 205/422 (48%), Gaps = 62/422 (14%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICES 125
           +E  R C   +L +AM+ + S +   +  D+ TY  +++ C   +++ +G    ++IC  
Sbjct: 31  SEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEG----NLICRH 86

Query: 126 GIVIDDG-----VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
             +  +G      L + L+ M+V    L +  ++F+++    V  W  ++  YSK    +
Sbjct: 87  --LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQ 144

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV----------------------- 217
           ++L L   M    +  + YT+S VL+    + + R +                       
Sbjct: 145 KALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVF 204

Query: 218 ------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                 +DA  +FDE+   D + WN +I G+  N  ++  LE+FK M   GF  + AT+ 
Sbjct: 205 AKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +VL  C     L  G   H   +K  + +++  NN L+DMY KCG L+ A+RVF +M ER
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG---- 387
            V++W++MI+G A+ G    A++LF  M   G +P+   I  +L AC+  GLLE G    
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 382

Query: 388 ---KDVH--DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
              K ++  D ++E+           ++D+  K G + DA  + N+M  + D V+W T++
Sbjct: 383 RSMKKLYGIDPVREH--------YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434

Query: 442 GA 443
           GA
Sbjct: 435 GA 436



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 201/419 (47%), Gaps = 61/419 (14%)

Query: 167 NLLMHEYSK---TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------------- 209
            LL+ E+++     +   ++     +QS G+ ADS T+S ++KC                
Sbjct: 27  TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86

Query: 210 VVGNSRR------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
           +  N  R                  + DAH+LFD++  R+V+SW  MIS Y    + +K 
Sbjct: 87  LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           LE+   ML      ++ T  +VL  C     +   R +H   +K     ++   + L+D+
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDV 203

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           ++K G+ + A+ VF++M     + W S+I G+A+    D A+ LF+ M R G   +   +
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
           TS+L AC    LLE+G   H +I + D    L ++NAL+DMY KCGS+ DA  VFNQM  
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKE 321

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI 480
           +D+++W+TMI           AL LF  M  +  +P+ +T+  +L AC+    LE G   
Sbjct: 322 RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG--- 378

Query: 481 HGYILR-----HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
             Y  R     +GI   R     ++D+  K G L  A  L + +  + D ++W  ++  
Sbjct: 379 -WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 152/316 (48%), Gaps = 50/316 (15%)

Query: 80  EKAME--VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
           +KA+E  VL   +  + +  TY S+L+ C     + D + +H  I + G+   D  + S 
Sbjct: 144 QKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLE-SDVFVRSA 199

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           L+ +F   G+ ++   VF+++  G   +WN ++  +++      +L LFK+M+  G  A+
Sbjct: 200 LIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 259

Query: 198 SYTFSCVLK-----CLAVVGNSRRV-------------------------KDAHKLFDEL 227
             T + VL+      L  +G    V                         +DA ++F+++
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQM 319

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
            +RDV++W+ MISG   NG +++ L++F+ M + G   +  T+V VL  C++ G L  G 
Sbjct: 320 KERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG- 378

Query: 288 AVHAFALKACFSKEISFNN--TLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYA 344
             +  ++K  +  +    +   ++D+  K G LD A+++  +M  E   V+W +++    
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL---- 434

Query: 345 REGVFDGAIRLFRGMV 360
                 GA R+ R MV
Sbjct: 435 ------GACRVQRNMV 444



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 5/142 (3%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ IG F +    + A+E+    +++    +  T  S+L+ C  L  LE G + H  I 
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +      D +L + LV M+  CG L++  RVFN++    V  W+ ++   ++ G  +E+L
Sbjct: 288 KYD---QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344

Query: 184 YLFKKMQSLGIAADSYTFSCVL 205
            LF++M+S G   +  T   VL
Sbjct: 345 KLFERMKSSGTKPNYITIVGVL 366


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/689 (34%), Positives = 383/689 (55%), Gaps = 30/689 (4%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+   +++ + +  + L   +  +G  +D+   + ++      G    +  A ++F  + 
Sbjct: 10  LLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGE---LDLACEVFGGMR 66

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGR 287
           DR+VVSW  ++ G++ +G A   L +  EM        +  T+   L  C   G    G 
Sbjct: 67  DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS-VVSWTSMIAGYARE 346
            +H   ++A + +     ++L+ +YSK G +  A RVF+  G  S + +W +M++GYA  
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHA 186

Query: 347 GVFDGAIRLFRGMVR-EGI-EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ--SS 402
           G    A+ +FR M R EG  +PD +   S+L AC+  G    G  VH  +  +     S+
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASN 246

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ 452
             ++ AL+DMY KC  +  A  VF ++  K+++ W  ++           AL+LF    +
Sbjct: 247 AILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWR 306

Query: 453 N-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
           +   PD   ++ ++   A  A +E+GR++H Y ++     D +  N+IVDMY+KCG+   
Sbjct: 307 SGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDE 366

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A  +F  + A +++SWT M+ G G HG G +A+A F +MR  G+EPDEV+++++L ACSH
Sbjct: 367 AERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSH 426

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           +GLVDE  R+F+ +R +  + PK EHYACMVDLL R G L EA   I  MP+ P   +W 
Sbjct: 427 AGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQ 486

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           +LL  CR+H +V +  +  + +  ++ DN   YV L+NV AEA +W E  K+R+ + RRG
Sbjct: 487 TLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRG 546

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGS---SHPHAKKIESLLKRLRLEMKRE-GY-FPKTRYA 746
           LKK  GCSW+E+  +V+ F  GG    +HP A  I  +L+ +   M+ + GY     R+A
Sbjct: 547 LKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNADDARFA 606

Query: 747 LINADEMEKEVALCGHSEKLAMAF-----GILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
           L + DE  +  +L  HSE+LA+       G+     G+ IRV KNLRVCGDCHE  K +S
Sbjct: 607 LHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEFFKGLS 666

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              RR +V+RD+NRFH F+ G CSC+ +W
Sbjct: 667 AVVRRALVVRDANRFHRFEHGSCSCKDYW 695



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 226/497 (45%), Gaps = 62/497 (12%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           K    +L+  A   SL  G ++H  I + G    D +LG+ L+ M+V CG+L     VF 
Sbjct: 5   KMIAGLLRASARSSSLRGGVQLHGAITKMGFG-SDTMLGNNLIDMYVKCGELDLACEVFG 63

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA-DSYTFSCVLKCLAVVGNSR 215
            + +  V  W  LM  + + G+    L L  +M++   AA + YT S  LK   VVG++ 
Sbjct: 64  GMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTA 123

Query: 216 --------------------------------RVKDAHKLFDELS-DRDVVSWNCMISGY 242
                                           R+ DA ++FD       + +WN M+SGY
Sbjct: 124 AGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGY 183

Query: 243 IANGVAEKGLEVFKEMLNL--GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
              G     L VF+EM         D  T  ++L  C+  GA   G  VHA    + FS 
Sbjct: 184 AHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFST 243

Query: 301 EIS--FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             +      L+DMY KC  L  A++VFE++  ++V+ WT+++ G+A+EG    A+ LFR 
Sbjct: 244 ASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRR 303

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
             R G  PD + ++S++   A   L+E G+ VH Y  ++   + +   N+++DMY KCG 
Sbjct: 304 FWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGL 363

Query: 419 MADAESVFNQMPVKDIVSWNTMIGALD----------LFVAMLQ-NFEPDGVTMACILPA 467
             +AE +F +M   ++VSW TM+  L           LF  M     EPD VT   +L A
Sbjct: 364 PDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSA 423

Query: 468 CASLAALERGREIHGYILRHGISADRNVANA------IVDMYVKCGVLVLARSLFDMIPA 521
           C+    ++  R     I R     DR V         +VD+  + G L  AR L   +P 
Sbjct: 424 CSHAGLVDECRRYFSCIRR-----DRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPM 478

Query: 522 KDLIS-WTIMIAGYGMH 537
           +  +  W  +++   +H
Sbjct: 479 EPTVGVWQTLLSACRVH 495



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 107/230 (46%), Gaps = 15/230 (6%)

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           I  +L A A    L  G  +H  I +    S   + N L+DMY KCG +  A  VF  M 
Sbjct: 7   IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66

Query: 431 VKDIVSWNTMI----------GALDLFVAMLQNFE--PDGVTMACILPACASLAALERGR 478
            +++VSW  ++          G L L   M    E  P+  T++  L AC  +     G 
Sbjct: 67  DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
            IHG  +R G      VA+++V +Y K G +  AR +FD       + +W  M++GY   
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHA 186

Query: 538 GFGCDAIATFNDMR--QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           G G DA+  F +MR  +   +PDE +F S+L ACS  G   EG +    M
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAM 236



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 163/403 (40%), Gaps = 73/403 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
            +NA +  +   G+   A+    E+     + + D  T+ S+L+ C+ L +  +G +VH+
Sbjct: 175 TWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHA 234

Query: 121 IICESGI-VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
            +  SG     + +L   LV M+V C  L    +VF +++   V  W  ++  +++ G  
Sbjct: 235 AMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQV 294

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCL---AVVGNSRRVK------------------ 218
            E+L LF++    G   DS+  S V+  L   A+V   R+V                   
Sbjct: 295 TEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSI 354

Query: 219 -----------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                      +A ++F E+   +VVSW  M++G   +G+  + + +F+EM   G   D 
Sbjct: 355 VDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDE 414

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T + +LS C+           HA  +  C              Y  C   D  +R    
Sbjct: 415 VTYLALLSACS-----------HAGLVDEC------------RRYFSCIRRDRTVRP--- 448

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
                   +  M+    R G    A  L R M    +EP V    ++L AC     + +G
Sbjct: 449 ----KAEHYACMVDLLGRAGELREARDLIRTMP---MEPTVGVWQTLLSACRVHKDVAVG 501

Query: 388 KDVHDYIKENDMQSSL-YVSNALMDMYAKCGSMADAESVFNQM 429
           ++  D +   D  + + YV+  L ++ A+ G   +   V + M
Sbjct: 502 REAGDVLLAMDGDNPVNYVT--LSNVLAEAGEWRECHKVRDAM 542



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 8/180 (4%)

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           +A +L A A  ++L  G ++HG I + G  +D  + N ++DMYVKCG L LA  +F  + 
Sbjct: 7   IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEGW 579
            ++++SWT ++ G+  HG     +    +MR A    P+E +  + L AC   G    G 
Sbjct: 67  DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126

Query: 580 RFFNMMRYECNIEPKLEH---YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
               +    C      EH    + +V + S+ G + +A R  +   +      W +++ G
Sbjct: 127 GIHGL----CVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSG 182


>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 579

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/585 (37%), Positives = 356/585 (60%), Gaps = 34/585 (5%)

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN---------NTLLDMY 312
           G   D AT   ++  C      +  RAVH   L     + + FN         N L++MY
Sbjct: 8   GLWADSATYSELIKCC------LSHRAVHEGNL---ICRHLYFNGHQPMMFLVNVLINMY 58

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
            K   L+ A ++F++M +R+V+SWT+MI+ Y++  +   A+ L   M+R+G+ P+VY  +
Sbjct: 59  VKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYS 118

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           S+L AC  +G+ ++ + +H  I +  ++S +YV +AL+D++AK G   DA SVF++M   
Sbjct: 119 SVLRAC--NGMSDV-RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTG 175

Query: 433 DIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIH 481
           D + WN++IG          AL+LF  M +  F  +  T+  +L AC  LA LE G + H
Sbjct: 176 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 235

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
            +I+++    D  + NA+VDMY KCG L  AR +F+ +  +D+I+W+ MI+G   +G+  
Sbjct: 236 VHIVKY--DQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQ 293

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
           +A+  F  M+ +G +P+ ++ + VL+ACSH+GL+++GW +F  M+    I P  EHY CM
Sbjct: 294 EALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCM 353

Query: 602 VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNT 661
           +DLL + G L +A + +  M   PDA  W +LL  CR+   + LAE  A+ V  L+P++ 
Sbjct: 354 IDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDA 413

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK 721
           G Y +L+N+YA ++KW+ V+++R+++   G+KK PGCSWIE+  +++ F+ G  SHP   
Sbjct: 414 GTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIV 473

Query: 722 KIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
           ++   L +L   +   GY P+T + L + +  + E +L  HSEKLA+AFG++ LP+ + I
Sbjct: 474 EVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVI 533

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           R+ KNLR+CGDCH   K  SK   R IV+RD  R+HHF+DG+CSC
Sbjct: 534 RIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSC 578



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 194/394 (49%), Gaps = 58/394 (14%)

Query: 189 MQSLGIAADSYTFSCVLKC---------------------------LAVVGNSRRVK--- 218
           +QS G+ ADS T+S ++KC                           L  V  +  VK   
Sbjct: 4   LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63

Query: 219 --DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
             DAH+LFD++  R+V+SW  MIS Y    + +K LE+   ML  G   ++ T  +VL  
Sbjct: 64  LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C     +   R +H   +K     ++   + L+D+++K G+ + A+ VF++M     + W
Sbjct: 124 CNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 180

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            S+I G+A+    D A+ LF+ M R G   +   +TS+L AC    LLE+G   H +I +
Sbjct: 181 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 240

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
            D    L ++NAL+DMY KCGS+ DA  VFNQM  +D+++W+TMI           AL L
Sbjct: 241 YD--QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 298

Query: 447 FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-----HGISADRNVANAIV 500
           F  M  +  +P+ +T+  +L AC+    LE G     Y  R     +GI+  R     ++
Sbjct: 299 FELMKSSGTKPNYITIVGVLFACSHAGLLEDG----WYYFRSMKKLYGINPGREHYGCMI 354

Query: 501 DMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
           D+  K G L  A  L + +  + D ++W  ++  
Sbjct: 355 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 388



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 189/391 (48%), Gaps = 56/391 (14%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG-----VLGSKLVFMFVTCGDLK 149
           D+ TY  +++ C   +++ +G    ++IC    +  +G      L + L+ M+V    L 
Sbjct: 12  DSATYSELIKCCLSHRAVHEG----NLICRH--LYFNGHQPMMFLVNVLINMYVKFNLLN 65

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
           +  ++F+++    V  W  ++  YSK    +++L L   M   G+  + YT+S VL+   
Sbjct: 66  DAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACN 125

Query: 210 VVGNSRRV-----------------------------KDAHKLFDELSDRDVVSWNCMIS 240
            + + R +                             +DA  +FDE+   D + WN +I 
Sbjct: 126 GMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIG 185

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G+  N  ++  LE+FK M   GF  + AT+ +VL  C     L  G   H   +K  + +
Sbjct: 186 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQ 243

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++  NN L+DMY KCG L+ A RVF +M ER V++W++MI+G A+ G    A++LF  M 
Sbjct: 244 DLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMK 303

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA-------LMDMY 413
             G +P+   I  +L AC+  GLLE G      +K+      LY  N        ++D+ 
Sbjct: 304 SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK------LYGINPGREHYGCMIDLL 357

Query: 414 AKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            K G + DA  + N+M  + D V+W T++GA
Sbjct: 358 GKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 388



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 151/316 (47%), Gaps = 50/316 (15%)

Query: 80  EKAME--VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
           +KA+E  VL   +  + +  TY S+L+ C     + D + +H  I + G+   D  + S 
Sbjct: 96  QKALELLVLMLRDGVRPNVYTYSSVLRAC---NGMSDVRMLHCGIIKEGLE-SDVYVRSA 151

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           L+ +F   G+ ++   VF+++  G   +WN ++  +++      +L LFK+M+  G  A+
Sbjct: 152 LIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 211

Query: 198 SYTFSCVLK-----CLAVVGNSRRV-------------------------KDAHKLFDEL 227
             T + VL+      L  +G    V                         +DA ++F+++
Sbjct: 212 QATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQM 271

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
            +RDV++W+ MISG   NG +++ L++F+ M + G   +  T+V VL  C++ G L  G 
Sbjct: 272 KERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDG- 330

Query: 288 AVHAFALKACFSKEISFNN--TLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYA 344
             +  ++K  +       +   ++D+  K G LD A+++  +M  E   V+W +++    
Sbjct: 331 WYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL---- 386

Query: 345 REGVFDGAIRLFRGMV 360
                 GA R+ R MV
Sbjct: 387 ------GACRVQRNMV 396



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 5/142 (3%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ IG F +    + A+E+    +++    +  T  S+L+ C  L  LE G + H  I 
Sbjct: 180 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 239

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +      D +L + LV M+  CG L++ RRVFN++    V  W+ ++   ++ G  +E+L
Sbjct: 240 KYD---QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEAL 296

Query: 184 YLFKKMQSLGIAADSYTFSCVL 205
            LF+ M+S G   +  T   VL
Sbjct: 297 KLFELMKSSGTKPNYITIVGVL 318


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/560 (41%), Positives = 335/560 (59%), Gaps = 19/560 (3%)

Query: 289 VHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
           +H  AL++  F  +    + LL MY  C     A R F+++ + + V  T+M +GY R  
Sbjct: 115 LHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNN 174

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG--KDVHDYIKENDMQSSLYV 405
           +   ++ LFR M+       V    +++   A   + + G    +H  I +   + +  V
Sbjct: 175 LVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGV 234

Query: 406 SNALMDMYAKCGS--MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ- 452
            N ++D YAK GS  +  A  VF+ M  +D+VSWN+MI           A+ L+  ML  
Sbjct: 235 VNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNV 293

Query: 453 --NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
               + + V ++ +L ACA   A++ G+ IH  ++R G+  +  V  +IVDMY KCG + 
Sbjct: 294 GGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVE 353

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
           +A   F  I  K+++SW+ MI GYGMHG G +A+  F +M+++G+ P+ ++FISVL ACS
Sbjct: 354 MASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACS 413

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
           H+GL+DEG  ++N M+ E  IE  +EHY CMVDLL R G L EAY  I+ M V PDA IW
Sbjct: 414 HAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIW 473

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
           G+LL  CRIH  V+LAE   + +FEL+  N+GYYVLL+N+YAEA  W++V+++R  +  R
Sbjct: 474 GALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTR 533

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
            ++K PG S  E+KGK+ +F  G  SHP   +I S L++L   M+  GY P T   L + 
Sbjct: 534 RIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDL 593

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           DE EKE AL  HSEKLA+AF ++N      I + KNLRVC DCH   KF++K   REI++
Sbjct: 594 DEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIII 653

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RD  RFHHFKDG CSCR +W
Sbjct: 654 RDLQRFHHFKDGLCSCRDYW 673



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 178/373 (47%), Gaps = 49/373 (13%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           G+++H +   SG+   D    S L+ M+  C    + RR F++I +    I   +   Y 
Sbjct: 112 GRQLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYV 171

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD--------------- 219
           +      SL LF+ M    IA+DS +       L     S RV D               
Sbjct: 172 RNNLVYHSLELFRAM----IASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIG 227

Query: 220 -------------------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                                    A K+FD + +RDVVSWN MI+ Y  NG++ + + +
Sbjct: 228 FERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGL 286

Query: 255 FKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           + +MLN+G  +  +   +  VL  CA+ GA+  G+ +H   ++    + +    +++DMY
Sbjct: 287 YSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMY 346

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           SKCG ++ A R F K+ E++++SW++MI GY   G    A+ +F  M R G+ P+     
Sbjct: 347 SKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFI 406

Query: 373 SILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
           S+L AC+  GLL+ G+  ++ +K+   +++ +     ++D+  + G + +A S+  +M V
Sbjct: 407 SVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKV 466

Query: 432 K-DIVSWNTMIGA 443
           K D   W  ++ A
Sbjct: 467 KPDAAIWGALLSA 479



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 10/189 (5%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +     ++L  CA   +++ GK++H+ +   G+  ++  +G+ +V M+  CG ++   
Sbjct: 298 KCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLE-ENVYVGTSIVDMYSKCGRVEMAS 356

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           R F KI    +  W+ ++  Y   G  +E+L +F +M+  G+  +  TF  VL   +  G
Sbjct: 357 RAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAG 416

Query: 213 ---NSRRVKDAHKLFDELS-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                R   +A K   E   +  V  + CM+      G  ++   + KEM       D A
Sbjct: 417 LLDEGRYWYNAMK--QEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEM---KVKPDAA 471

Query: 269 TMVTVLSGC 277
               +LS C
Sbjct: 472 IWGALLSAC 480


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/615 (38%), Positives = 345/615 (56%), Gaps = 22/615 (3%)

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
             SWN  +         ++ L ++ +ML  G + +  T       CA+    + G  +H 
Sbjct: 21  TASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHG 80

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF-EKMGERSV-VSWTSMIAGYAREGVF 349
             +K     E     +L+ MY KC  +  A +VF E    R++ V + ++IAGY+    F
Sbjct: 81  HVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRF 140

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             A+ LFR M +EG+  +   +  ++  CA    L  G  +H       +   L V N L
Sbjct: 141 SDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCL 200

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM-LQNFEPDG 458
           + MY +CGS+  A  +F+ MP K +++WN MI            LDL+  M      PD 
Sbjct: 201 LTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDP 260

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           VT+  +L +CA L A   GRE+   I   G   +  + NA+++MY +CG LV AR++FD 
Sbjct: 261 VTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDG 320

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           +  K++ISWT +IAGYGMHG G  A+  F++M  +   PD  +F+SVL ACSH+GL ++G
Sbjct: 321 MTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKG 380

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
             +F  M  +  ++P  EHY+C+VDLL R G L EA + I  M V PD  +WG+LL  C+
Sbjct: 381 LYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACK 440

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
           IH  V+LAE   E V E EP N GYYVLL+N+++EA   E + ++R  +  R LKK PGC
Sbjct: 441 IHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGC 500

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           S++E +G++++F+AG  +HP A++I  +L  L   +KR G          N  E   E  
Sbjct: 501 SYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSND------NDQESRNEEL 554

Query: 759 LCG---HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNR 815
           + G   HSEKLA+AFG++N   G  I V KNLRVCGDCH   K +S+   R++V+RD+ R
Sbjct: 555 ITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATR 614

Query: 816 FHHFKDGRCSCRGFW 830
           FHHFK+G CSC+ +W
Sbjct: 615 FHHFKNGVCSCKDYW 629



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 204/419 (48%), Gaps = 47/419 (11%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-----SCVLKCLAVVGNS------ 214
           WN  + E ++  +F+E+L L+ +M + G + +++TF     SC    L + G+       
Sbjct: 24  WNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVI 83

Query: 215 ---------------------RRVKDAHKLFDE--LSDRDVVSWNCMISGYIANGVAEKG 251
                                  +  A K+FDE   S    V +N +I+GY  N      
Sbjct: 84  KTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDA 143

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           + +F++M   G +V+  TM+ ++  CA    L FG ++HA +++     ++S  N LL M
Sbjct: 144 VLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTM 203

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y +CG +D A ++F+ M E+ +++W +MI+GYA+ G+    + L+R M   GI PD   +
Sbjct: 204 YVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTL 263

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
             +L +CA  G    G++V   I+ +    + ++ NAL++MYA+CG++  A ++F+ M  
Sbjct: 264 VGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTE 323

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREI 480
           K+++SW  +I           A+ LF  M+ + E PDG     +L AC+     E+G   
Sbjct: 324 KNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYY 383

Query: 481 HGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMH 537
              + R +G+       + +VD+  + G L  AR L   M    D   W  ++    +H
Sbjct: 384 FTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIH 442



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 165/355 (46%), Gaps = 19/355 (5%)

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           + +  SW + +   AR+  F  A+ L+  M+  G  P+ +       +CA   L   G  
Sbjct: 18  QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF--NQMPVKDIVSWNTMIGALDL- 446
           +H ++ +   +   +V  +L+ MY KC ++A A  VF  N       V +N +I    L 
Sbjct: 78  LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137

Query: 447 -----FVAMLQNFEPDG-----VTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                 V + +    +G     VTM  ++P CA    L  G  +H   +R G+  D +V 
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           N ++ MYV+CG +  AR LFD +P K LI+W  MI+GY  +G     +  +  M   GI 
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC-NIEPKLEHYACMVDLLSRTGNLSEAY 615
           PD V+ + VL +C+H G    G      +        P L++   ++++ +R GNL +A 
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKAR 315

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE--PDNTGYYVLLA 668
              + M    +   W +++ G  +H + +LA ++ + +   +  PD   +  +L+
Sbjct: 316 AIFDGM-TEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLS 369



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 33/224 (14%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E   ++  T   ++ +CA    L  G  +H+     G+  D  V G+ L+ M+V CG + 
Sbjct: 153 EGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSV-GNCLLTMYVRCGSVD 211

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
             R++F+ +    +  WN ++  Y++ G     L L++KM+  GI  D  T   VL   A
Sbjct: 212 FARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCA 271

Query: 210 VVG---NSRRVKD-----------------------------AHKLFDELSDRDVVSWNC 237
            +G     R V+                              A  +FD +++++V+SW  
Sbjct: 272 HLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTA 331

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           +I+GY  +G  E  +++F EM++     D A  V+VLS C++ G
Sbjct: 332 IIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAG 375


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/565 (38%), Positives = 347/565 (61%), Gaps = 24/565 (4%)

Query: 287 RAVHAFALK-------ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTS 338
           R +HAF+++       A   K + F   L+ + S    +  A +VF K+ +  +V  W +
Sbjct: 34  RQIHAFSIRHGVSISDAELGKHLIF--YLVSLPSP-PPMSYAHKVFSKIEKPINVFIWNT 90

Query: 339 MIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           +I GYA  G    A  L+R M   G +EPD +    ++ A      + +G+ +H  +  +
Sbjct: 91  LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
              S +YV N+L+ +YA CG +A A  VF++MP KD+V+WN++I           AL L+
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210

Query: 448 VAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M  +  +PDG T+  +L ACA + AL  G+ +H Y+++ G++ + + +N ++D+Y +C
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA-GIEPDEVSFISV 565
           G +  A++LFD +  K+ +SWT +I G  ++GFG +AI  F  M    G+ P E++F+ +
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           LYACSH G+V EG+ +F  MR E  IEP++EH+ CMVDLL+R G + +AY +I+ MP+ P
Sbjct: 331 LYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQP 390

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
           +  IW +LL  C +H +  LAE     + +LEP+++G YVLL+N+YA  ++W +V+K+R+
Sbjct: 391 NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRK 450

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
           ++ R G+KK PG S +E+  +V+ F+ G  SHP +  I + LK +   ++ EGY P+   
Sbjct: 451 QMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISN 510

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
             ++ +E EKE A+  HSEK+A+AF +++ P    I V KNLRVC DCH   K +SK   
Sbjct: 511 VYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYN 570

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REIV+RD +RFHHFK+G CSC+ +W
Sbjct: 571 REIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 198/375 (52%), Gaps = 40/375 (10%)

Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD---LKEGRRVFNKIDNG-KVF 164
           + S+   +++H+     G+ I D  LG  L+F  V+      +    +VF+KI+    VF
Sbjct: 27  VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVF 86

Query: 165 IWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSR-------- 215
           IWN L+  Y++ GN   +  L+++M+  G +  D++T+  ++K +  + + R        
Sbjct: 87  IWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 146

Query: 216 ------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
                                    V  A+K+FD++ ++D+V+WN +I+G+  NG  E+ 
Sbjct: 147 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 206

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           L ++ EM + G   D  T+V++LS CA  GAL  G+ VH + +K   ++ +  +N LLD+
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGIEPDVYA 370
           Y++CG ++ A  +F++M +++ VSWTS+I G A  G    AI LF+ M   EG+ P    
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326

Query: 371 ITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
              IL+AC+  G+++ G +    ++E   ++  +     ++D+ A+ G +  A      M
Sbjct: 327 FVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386

Query: 430 PVK-DIVSWNTMIGA 443
           P++ ++V W T++GA
Sbjct: 387 PMQPNVVIWRTLLGA 401



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 189/371 (50%), Gaps = 27/371 (7%)

Query: 220 AHKLFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF-NVDLATMVTVLSGC 277
           AHK+F ++    +V  WN +I GY   G +     +++EM   G    D  T   ++   
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
                +  G  +H+  +++ F   I   N+LL +Y+ CGD+  A +VF+KM E+ +V+W 
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           S+I G+A  G  + A+ L+  M  +GI+PD + I S+L ACA  G L +GK VH Y+ + 
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLF 447
            +  +L+ SN L+D+YA+CG + +A+++F++M  K+ VSW ++I           A++LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311

Query: 448 VAM--LQNFEPDGVTMACILPACASLAALERGREIHGYILR----HGISADRNVANAIVD 501
             M   +   P  +T   IL AC+    ++ G E   Y  R    + I         +VD
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFE---YFRRMREEYKIEPRIEHFGCMVD 368

Query: 502 MYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD-- 558
           +  + G +  A      +P + +++ W  ++    +H  G   +A F  ++   +EP+  
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPNHS 426

Query: 559 -EVSFISVLYA 568
            +   +S +YA
Sbjct: 427 GDYVLLSNMYA 437



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 159/361 (44%), Gaps = 52/361 (14%)

Query: 31  PSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSE 90
           PS  P+  + K  S     PI+  I  TL+   + Y AEIG      +L + M V   S 
Sbjct: 64  PSPPPMSYAHKVFSKIE-KPINVFIWNTLI---RGY-AEIGNSISAFSLYREMRV---SG 115

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
             + DT TY  +++    +  +  G+ +HS++  SG      V  S L+ ++  CGD+  
Sbjct: 116 LVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNS-LLHLYANCGDVAS 174

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
             +VF+K+    +  WN +++ +++ G  +E+L L+ +M S GI  D +T   +L   A 
Sbjct: 175 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 234

Query: 211 VG--------------------------------NSRRVKDAHKLFDELSDRDVVSWNCM 238
           +G                                   RV++A  LFDE+ D++ VSW  +
Sbjct: 235 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 294

Query: 239 ISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGAL-----MFGRAVHAF 292
           I G   NG  ++ +E+FK M +  G      T V +L  C++CG +      F R    +
Sbjct: 295 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEY 354

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDG 351
            ++      I     ++D+ ++ G +  A    + M  + +VV W +++      G  D 
Sbjct: 355 KIEP----RIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDL 410

Query: 352 A 352
           A
Sbjct: 411 A 411



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 36/209 (17%)

Query: 451 LQNFEPDGVTMACILPACASL------AALERGREIHGYILRHGIS-ADRNVANAIVDMY 503
           +  F    V +  ++  C +L      +++ + R+IH + +RHG+S +D  +   ++   
Sbjct: 1   MSPFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYL 60

Query: 504 VKC---GVLVLARSLFDMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-IEPD 558
           V       +  A  +F  I    ++  W  +I GY   G    A + + +MR +G +EPD
Sbjct: 61  VSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPD 120

Query: 559 EVSFISVLYACS-----------HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
             ++  ++ A +           HS ++  G   F  + Y  N          ++ L + 
Sbjct: 121 THTYPFLIKAVTTMADVRLGETIHSVVIRSG---FGSLIYVQN---------SLLHLYAN 168

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            G+++ AY+  + MP   D   W S++ G
Sbjct: 169 CGDVASAYKVFDKMP-EKDLVAWNSVING 196


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/565 (38%), Positives = 338/565 (59%), Gaps = 12/565 (2%)

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           ++C ++ +  A+HA  +K+    +    + L+ MY K G  + A R+F++M  + +VSW 
Sbjct: 73  SSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWN 132

Query: 338 SMIAGYAREGVFDGAIRLF-RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           S+++G +  G     +  F R     G +P+   + S++ ACA  G L+ GK +H  + +
Sbjct: 133 SLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVK 192

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDL 446
             M     V N+L++MY K G +  A  +F +MPV+ +VSWN+M+            +DL
Sbjct: 193 LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDL 252

Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M +    PD  TM  +L AC       +   IH YI R G +AD  +A A++++Y K
Sbjct: 253 FNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAK 312

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
            G L  +  +F+ I  +D I+WT M+AGY +H  G +AI  F+ M + G+E D V+F  +
Sbjct: 313 LGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHL 372

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           L ACSHSGLV+EG ++F +M     +EP+L+HY+CMVDLL R+G L +AY  I+ MP+ P
Sbjct: 373 LSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEP 432

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
            + +WG+LL  CR++  V+L ++VAE +  L+P +   Y++L+N+Y+ A  W +  K+R 
Sbjct: 433 SSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRA 492

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
            +  R L +NPGCS+IE   K++ FV G   HP + +I + L+ L  +++  G  PKT +
Sbjct: 493 LMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEF 552

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            L + DE  K   +  HSEKLA+AFG+L   +G  + +TKNLR+CGDCH  AKF S   +
Sbjct: 553 VLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEK 612

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           R I++RDS RFHHF DG CSCR +W
Sbjct: 613 RTIIIRDSKRFHHFADGLCSCRDYW 637



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 204/443 (46%), Gaps = 67/443 (15%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           +YS  +S +   + C+ +  C+          +H+ + +S +   DG +G +LV M+   
Sbjct: 61  VYSIVQSLVFAISSCTSVSYCS---------AIHARVIKS-LNYSDGFIGDRLVSMYFKL 110

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS-------------- 191
           G  ++ +R+F+++ N  +  WN LM   S  G     L  F +M++              
Sbjct: 111 GYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSV 170

Query: 192 ------LGIAADSYTFSCVLKCLAVVGNSRRVKD-------------AHKLFDELSDRDV 232
                 +G   +  +   V+  L + G ++ V               A +LF+E+  R +
Sbjct: 171 VSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSL 230

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           VSWN M+  +  NG AEKG+++F  M   G N D ATMV +L  C + G      ++HA+
Sbjct: 231 VSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAY 290

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
             +  F+ +I     LL++Y+K G L+ +  +FE++ +R  ++WT+M+AGYA       A
Sbjct: 291 IHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREA 350

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMD 411
           I+LF  MV+EG+E D    T +L AC+  GL+E GK   + + E   ++  L   + ++D
Sbjct: 351 IKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVD 410

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASL 471
           +  + G + DA  +   MP+                       EP       +L AC   
Sbjct: 411 LLGRSGRLEDAYELIKSMPM-----------------------EPSSGVWGALLGACRVY 447

Query: 472 AALERGREIHGYILRHGISADRN 494
             +E G+E+   +L    S  RN
Sbjct: 448 GNVELGKEVAEQLLSLDPSDHRN 470



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 166/318 (52%), Gaps = 17/318 (5%)

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSG 276
           +DA +LFDE+ ++D+VSWN ++SG    G     L  F  M    G   +  T+++V+S 
Sbjct: 114 EDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSA 173

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA+ GAL  G+++H   +K   S +    N+L++MY K G LD A ++FE+M  RS+VSW
Sbjct: 174 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 233

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            SM+  +   G  +  + LF  M R GI PD   + ++L AC   GL    + +H YI  
Sbjct: 234 NSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHR 293

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
               + + ++ AL+++YAK G +  +E +F ++  +D ++W  M+           A+ L
Sbjct: 294 CGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKL 353

Query: 447 FVAML-QNFEPDGVTMACILPACASLAALERGR---EIHGYILRHGISADRNVANAIVDM 502
           F  M+ +  E D VT   +L AC+    +E G+   EI   + R  +    +  + +VD+
Sbjct: 354 FDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYR--VEPRLDHYSCMVDL 411

Query: 503 YVKCGVLVLARSLFDMIP 520
             + G L  A  L   +P
Sbjct: 412 LGRSGRLEDAYELIKSMP 429



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
           A +S  ++     IH  +++    +D  + + +V MY K G    A+ LFD +P KDL+S
Sbjct: 71  AISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVS 130

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMR-QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           W  +++G    G+    +  F  MR ++G +P+EV+ +SV+ AC+  G +DEG     ++
Sbjct: 131 WNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVV 190

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
             +  +  K +    ++++  + G L  A +  E MPV    + W S++    IH+    
Sbjct: 191 -VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS-WNSMVV---IHNHNGY 245

Query: 646 AEK 648
           AEK
Sbjct: 246 AEK 248


>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/657 (38%), Positives = 359/657 (54%), Gaps = 92/657 (14%)

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           VSWN ++S Y    V    + +F+EM  +G+ + L   V V++     G L F       
Sbjct: 24  VSWNSIVSVYSHCFVPNDAVFLFREM-TVGYGI-LPDTVGVVNILPVSGFLGF------- 74

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
                        N L+DMY+KCG ++ A +VFE+M  + VV+W +M+ GY++ G F+ A
Sbjct: 75  ----------FVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDA 124

Query: 353 IRLFRGMVREGIE-----------------------------------PDVYAITSILHA 377
           + LF  M  E IE                                   P+V  + S+L A
Sbjct: 125 LSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSA 184

Query: 378 CACDGLLEIGKDVHDYI-------KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           CA  G L  GK+ H Y        + ND    L V NAL+DMYAKC S+  A ++F+++ 
Sbjct: 185 CASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEIC 244

Query: 431 VKD--IVSWNTMIG----------ALDLFVAMLQN---FEPDGVTMACILPACASLAALE 475
            KD  +V+W  MIG          AL LF  M +      P+  T++C+L ACA LAAL+
Sbjct: 245 PKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALK 304

Query: 476 RGREIHGYILRHG-ISAD-RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
            G++IH Y+LR   I +D   VAN ++DMY K G +  A+ +FD +  ++ +SWT ++ G
Sbjct: 305 FGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTG 364

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           YGMHG              A +  D ++F+ VLYACSHSG+VD G   F  M  +  ++P
Sbjct: 365 YGMHG--------------AALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDP 410

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            +EHYACM DL  R G L EA R I  M + P   +W +LL  CR H   +LAE  A+ +
Sbjct: 411 GVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKKL 470

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
            EL+ DN G Y LL+N+YA A +W++V ++R  + R G+KK PG SW++ +  +  F  G
Sbjct: 471 LELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVKGRKGMETFYVG 530

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
             +H  ++KI   L  L   +K  GY P+T ++L + D+ EK   L  HSEKLA+A+ IL
Sbjct: 531 DRTHLQSQKIYETLADLIKRIKAIGYVPQTNFSLHDVDDEEKGDQLLEHSEKLALAYAIL 590

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            LP G  IR+TKNLR+CGD H    ++S     EI+LRDS+RFH FK+G CSC+G+W
Sbjct: 591 TLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 647



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 221/453 (48%), Gaps = 84/453 (18%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           +G+ LV M+  CG +++  +VF ++    V  WN ++  YS+ G F+++L LF KM+   
Sbjct: 76  VGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMR--- 132

Query: 194 IAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
                                          +E  + DVV+W+ +ISGY   G   + ++
Sbjct: 133 -------------------------------EEKIELDVVTWSSVISGYAQRGFGCEAMD 161

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE-------ISFNN 306
           VF++M       ++ T++++LS CA+ GAL+ G+  H +++K     E       ++  N
Sbjct: 162 VFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVIN 221

Query: 307 TLLDMYSKCGDLDGAIRVFEKM--GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR--E 362
            L+DMY+KC  L+ A  +F+++   +R VV+WT MI GYA+ G  + A++LF  M +   
Sbjct: 222 ALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDN 281

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS--LYVSNALMDMYAKCGSMA 420
            I P+ + I+ +L ACA    L+ GK +H Y+       S  L+V+N L+DMY+K G + 
Sbjct: 282 CIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVD 341

Query: 421 DAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREI 480
            A+ VF+ M  ++ VSW +++    +  A L     DG+T   +L AC+    ++RG   
Sbjct: 342 TAQVVFDSMSKRNAVSWTSLLTGYGMHGAALV---LDGITFLVVLYACSHSGMVDRG--- 395

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
                              +D++         R   D +    +  +  M   +G  G  
Sbjct: 396 -------------------IDLFY--------RMSKDFVVDPGVEHYACMADLFGRAGRL 428

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYAC-SHS 572
           C+A    NDM    +EP  V +I++L AC +HS
Sbjct: 429 CEATRLINDM---SMEPTPVVWIALLSACRTHS 458



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 118/293 (40%), Gaps = 64/293 (21%)

Query: 98  TYCSILQLCADLKSLEDGKKVHS------IICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           T  S+L  CA + +L  GK+ H       +  E     DD  + + L+ M+  C  L+  
Sbjct: 177 TLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVA 236

Query: 152 RRVFNKI--DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG--IAADSYTFSCVLKC 207
           R +F++I   +  V  W +++  Y++ G+   +L LF +M  +   I  + +T SCVL  
Sbjct: 237 RAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMA 296

Query: 208 LA--------------VVGNSR--------------------RVKDAHKLFDELSDRDVV 233
            A              V+  SR                     V  A  +FD +S R+ V
Sbjct: 297 CARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAV 356

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           SW  +++GY  +G A                +D  T + VL  C++ G  M  R +  F 
Sbjct: 357 SWTSLLTGYGMHGAA--------------LVLDGITFLVVLYACSHSG--MVDRGIDLFY 400

Query: 294 LKA---CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 342
             +        +     + D++ + G L  A R+   M  E + V W ++++ 
Sbjct: 401 RMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSA 453


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/717 (33%), Positives = 374/717 (52%), Gaps = 45/717 (6%)

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGN 213
           KI  GK  + NL +   SK G  KE+    K+M    ++   +++ C+ +    L  + +
Sbjct: 48  KIQQGK--LENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLAD 105

Query: 214 SRRVKD-----------------------------AHKLFDELSDRDVVSWNCMISGYIA 244
            R + D                               K+FDE+  +++VSW  +IS Y  
Sbjct: 106 GRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAK 165

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           NG  EK + +F +M   G   + A  +++L  C     L  G+ +H+  ++A  +  I+ 
Sbjct: 166 NGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITV 225

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
              + +MY +CG L+GA  VF+ M  ++ V+WT ++ GY +    + A+ LF  M  EG+
Sbjct: 226 ETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGV 285

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           E D +  + +L  C      ++G+ +H +I +   +S + V   L+D Y KCG +  A  
Sbjct: 286 ELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYR 345

Query: 425 VFNQMPVKDIVSWNTMI------GALDLFVAMLQNFEPDGVTM-----ACILPACASLAA 473
            F ++   + VSW+ +I      G L+  + +  +   +GV +       +  ACA+ A 
Sbjct: 346 SFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQAN 405

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           L  G + HG  ++ G+ +     +A+V MY KCG L  AR  F+ I   D ++WT +I+G
Sbjct: 406 LNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISG 465

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           Y  HG   +A+  F  M+  G+ P+ V+FI+VL ACSHSGLV E  ++   M  +  ++P
Sbjct: 466 YAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKP 525

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            ++HY CM+D  SR G L EA   I  MP  PDA  W SLL GC  H ++KL +  AE++
Sbjct: 526 TIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENL 585

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
           F L+P +T  Y+LL N+Y+   KWEE   +R+ ++ R LKK   CSWI +KG+V+ FV G
Sbjct: 586 FRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVG 645

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
              HP  + I S L+  +  +             ++     ++  L  HSEKLA+AFG++
Sbjct: 646 DRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGLI 705

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +      I V KNLR C DCHE  K +S    R+IV+RDS RFHHFK G+CSC  +W
Sbjct: 706 STEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/574 (24%), Positives = 259/574 (45%), Gaps = 61/574 (10%)

Query: 16  SPPNQSYGKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCE 75
           S  NQ+     A++  + +P  VS K  SS        +I    + + K  N  +    +
Sbjct: 15  STRNQTSTSSSANF--AQIPSWVSLKRSSS--------TIKTEKIQQGKLENLHLVSLSK 64

Query: 76  VGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV 133
            G L++A + L   + + +     +Y  + + C  L+SL DG+ +H  +  + +    G 
Sbjct: 65  QGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRT-VKNPSGS 123

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           + + L+ M+  CG   + ++VF+++    +  W +++  Y+K G  ++++ LF  MQ+ G
Sbjct: 124 IENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASG 183

Query: 194 IAADSYTFSCVLK-CL----------------------------AVVGNSRR---VKDAH 221
           I  +S  +  +L+ CL                            A+     R   ++ A 
Sbjct: 184 IRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAK 243

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
            +FD +  ++ V+W  ++ GY      E  LE+F  M   G  +D      VL  C    
Sbjct: 244 LVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLE 303

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
               GR +H+  +K     E+S    L+D Y KCGD++ A R F ++ E + VSW+++I+
Sbjct: 304 DWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALIS 363

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           G+++ G  +  I++F  +  EG+  + +  TS+  ACA    L +G   H    +  + S
Sbjct: 364 GFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVS 423

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
            LY  +A++ MY+KCG +  A   F  +   D V+W  +I           AL  F  M 
Sbjct: 424 YLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQ 483

Query: 452 Q-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVL 509
                P+ VT   +L AC+    +   ++  G + R +G+    +  + ++D Y + G+L
Sbjct: 484 SYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLL 543

Query: 510 VLARSLFDMIP-AKDLISWTIMIAGYGMHGFGCD 542
             A  L + +P   D +SW  ++ G   H   CD
Sbjct: 544 QEALELINRMPFEPDAMSWKSLLGGCWAH---CD 574



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 156/354 (44%), Gaps = 41/354 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +++A I  F + G LE  +++  S  SE   +++  Y S+ Q CA   +L  G + H   
Sbjct: 357 SWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDA 416

Query: 123 CESGIVIDDGVLG-SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            + G+V    + G S +V M+  CG L   RR F  ID      W  ++  Y+  GN  E
Sbjct: 417 IKRGLV--SYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAE 474

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD------VVSW 235
           +L  F++MQS G+  ++ TF  V   L    +S  V +A +    +S RD      +  +
Sbjct: 475 ALGFFRRMQSYGVRPNAVTFIAV---LTACSHSGLVAEAKQYLGSMS-RDYGVKPTIDHY 530

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC-ANCGALMFGRAVHAFAL 294
           +CMI  Y   G+ ++ LE+   M    F  D  +  ++L GC A+C  L  G+ + A  L
Sbjct: 531 DCMIDTYSRAGLLQEALELINRM---PFEPDAMSWKSLLGGCWAHCD-LKLGK-IAAENL 585

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV-----VSWTSMIAGYAREGVF 349
                 + +    L ++YS  G  + A  V + M ER +      SW S+          
Sbjct: 586 FRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKG-------- 637

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
               ++ R +V +   P   AI S L    C     I   V    +E+D+  SL
Sbjct: 638 ----QVHRFVVGDRHHPQTEAIYSKLEEFKCS---VIDSPVRLLNEEDDVSCSL 684


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/696 (34%), Positives = 378/696 (54%), Gaps = 59/696 (8%)

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           + E R VF+K+    V+++ +++  Y++   F  +L LF +M    + + +        C
Sbjct: 27  IDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDC 86

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
             +         A KLFDE+ +R VVSW  MI+G++  G  E    +F +M         
Sbjct: 87  ADLTM-------ARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKM--------- 130

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
                                   F       ++I+  N+++  Y   G ++  +R+F++
Sbjct: 131 -----------------------PF-------RDIAAWNSMIYGYCCNGRVEDGLRLFQE 160

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVYAITSILHACACDGLLE 385
           M  R+V+SWTSMI G  + G  + A+ LFR M+  G+E  P       ++ ACA    L 
Sbjct: 161 MPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALY 220

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---- 441
            G  +H ++ +       Y+S AL+  YA C  M D+  VF+     ++V W  ++    
Sbjct: 221 QGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYG 280

Query: 442 ------GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  AL +F  M+ +   P+  +    L +C  L AL+ GREIH   ++ G+  D  
Sbjct: 281 LNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVF 340

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V N+++ MY +CG L     +F  I  K+++SW  +I G   HG G  A+A FN M ++ 
Sbjct: 341 VGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSM 400

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           +EPDE++F  +L ACSHSG+  +G   F       + E KL+HYACMVD+L R+G L EA
Sbjct: 401 VEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEA 460

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
              I  MPV  ++ +W  LL  C +H ++++AE+ A+ + +LEP  +  YVLL+N+YA A
Sbjct: 461 EELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASA 520

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +W +V ++R ++ +RG+ K PG SWI IKG  N F++G  SHP + +I   L+ L  ++
Sbjct: 521 SRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKL 580

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           K  GY P  R+AL + ++ +KEV L  HSE+LA+ FG+++   G TI V KNLRVCGDCH
Sbjct: 581 KELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCH 640

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              K ++K  RR+I++RDS RFHHF DGRCSC  +W
Sbjct: 641 SAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 229/488 (46%), Gaps = 62/488 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICES 125
           Y   I  +      + A+++ Y  E    D  ++ S+++ C D   L   +K+   + E 
Sbjct: 45  YTMMITGYARNYRFDHALQLFY--EMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPER 102

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
            +V       + ++  F+  G ++    +F K+    +  WN +++ Y   G  ++ L L
Sbjct: 103 SVVS-----WTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRL 157

Query: 186 FKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
           F++M                                        R+V+SW  MI G   +
Sbjct: 158 FQEMPC--------------------------------------RNVISWTSMIGGLDQH 179

Query: 246 GVAEKGLEVFKEMLNLGFNVDL--ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
           G +E+ L +F++M+  G  V    +T   V++ CAN  AL  G  +HA   K  +S +  
Sbjct: 180 GRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAY 239

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
            +  L+  Y+ C  ++ ++RVF      +VV WT+++ GY      + A+++F  M+REG
Sbjct: 240 ISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREG 299

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           + P+  + TS L++C     L+ G+++H    +  +++ ++V N+L+ MY +CG++ D  
Sbjct: 300 VLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGV 359

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNF-EPDGVTMACILPACASLA 472
            +F ++  K+IVSWN++I           AL  F  M+++  EPD +T   +L AC+   
Sbjct: 360 VIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSG 419

Query: 473 ALERGREIHGYILRHGISADRNVAN--AIVDMYVKCGVLVLARSLFDMIPAK-DLISWTI 529
             ++GR +  Y      SA+  + +   +VD+  + G L  A  L   +P K + + W +
Sbjct: 420 MSQKGRCLFKY-FSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLV 478

Query: 530 MIAGYGMH 537
           +++   MH
Sbjct: 479 LLSACTMH 486



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 177/378 (46%), Gaps = 43/378 (11%)

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           + +++ +   G +++G R+F ++    V  W  ++    + G  +E+L LF++M   G+ 
Sbjct: 139 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 198

Query: 196 AD--SYTFSCVLKCLA--------------------------------VVGNSRRVKDAH 221
               S T+ CV+   A                                   N ++++D+ 
Sbjct: 199 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 258

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           ++F      +VV W  +++GY  N   E  L+VF EM+  G   + ++  + L+ C    
Sbjct: 259 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLE 318

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
           AL +GR +H  A+K     ++   N+L+ MY +CG+L+  + +F+++ ++++VSW S+I 
Sbjct: 319 ALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIV 378

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQ 400
           G A+ G    A+  F  MVR  +EPD    T +L AC+  G+ + G+ +  Y  EN   +
Sbjct: 379 GCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAE 438

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLFVAMLQNFEPDGV 459
             L     ++D+  + G + +AE +   MPVK + + W  ++ A      M    E    
Sbjct: 439 VKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSA----CTMHSKLEVAER 494

Query: 460 TMACIL---PACASLAAL 474
              CI+   P C+S   L
Sbjct: 495 AAKCIIDLEPHCSSAYVL 512



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 94/427 (22%), Positives = 168/427 (39%), Gaps = 78/427 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++ + IG   + G  E+A+    +++    + K  + TYC ++  CA+  +L  G ++H+
Sbjct: 168 SWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHA 227

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            + + G   D   + + L+  +  C  +++  RVF+   +  V IW  L+  Y      +
Sbjct: 228 HVFKLGYSFD-AYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHE 286

Query: 181 ESLYLFKKMQSLGIAADSYTFS------CVLKCL------------------AVVGNSRR 216
           ++L +F +M   G+  +  +F+      C L+ L                    VGNS  
Sbjct: 287 DALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLI 346

Query: 217 V--------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
           V         D   +F  +S +++VSWN +I G   +G     L  F +M+      D  
Sbjct: 347 VMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEI 406

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T   +LS C++ G    GR         C  K  S N                     K 
Sbjct: 407 TFTGLLSACSHSGMSQKGR---------CLFKYFSEN---------------------KS 436

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            E  +  +  M+    R G  + A  L R M    ++ +      +L AC     LE+ +
Sbjct: 437 AEVKLDHYACMVDILGRSGKLEEAEELIRNM---PVKANSMVWLVLLSACTMHSKLEVAE 493

Query: 389 DVHDYIKENDMQ-SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV-----SWNTMIG 442
                I + +   SS YV   L ++YA     +D   +  +M  + I      SW T+ G
Sbjct: 494 RAAKCIIDLEPHCSSAYV--LLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKG 551

Query: 443 ALDLFVA 449
             + F++
Sbjct: 552 WRNEFLS 558


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/601 (37%), Positives = 344/601 (57%), Gaps = 52/601 (8%)

Query: 279 NCGALMFGRAVHAFALKA-------CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
            C  L   + +HA+ ++          S+ I+F    +D  S    +D A R+F ++   
Sbjct: 26  TCSDLTHLKIIHAYMIRTHIICDVFAASRLIAF---CVDPSSGTSLIDYASRIFSQIQNP 82

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           ++  + +MI G++     D A   +    R+G+ PD      ++ +C     + +G   H
Sbjct: 83  NLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAH 142

Query: 392 DYIKENDMQSSLYVSNALMDMYA-------------------------------KCGSMA 420
            +I ++  +  +YV N+L+ MYA                               KCG + 
Sbjct: 143 GHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVE 202

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLF-VAMLQNFEPDGVTMACILPACA 469
            A  +F+QMP K++V+W+TMI           A++LF V   Q    +   M  ++ +CA
Sbjct: 203 SARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCA 262

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            L ALE G   H Y++++G++ +  +  A+VDMY +CG +  A  +F+ +P +D +SWT 
Sbjct: 263 HLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTA 322

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           +IAG  MHG+   ++  F  M +AG+ P +++F +VL ACSH GLV+ G++ F  M+ + 
Sbjct: 323 LIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDH 382

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            +EP+LEHY CMVDLL R G L EA RF+  MPV P+A +WG+LL  CRIH   ++ E+V
Sbjct: 383 RVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERV 442

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
            + + +L P ++GYYVLL+N+YA A++WE+V ++R+ +  +GLKK PG S IE+ G+V+ 
Sbjct: 443 GKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHK 502

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F  G SSHP   KIE + + + + ++  GY   T  AL + DE EKE AL  HSEKLA+A
Sbjct: 503 FTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIA 562

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           FG++   AG  IR+ KNLRVC DCH   K +SK   RE+++RD NRFHHF+ G CSC  +
Sbjct: 563 FGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDY 622

Query: 830 W 830
           W
Sbjct: 623 W 623



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 186/382 (48%), Gaps = 43/382 (11%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I       N ++A      S++  +  D  T+  +++ C  L  +  G + H  I 
Sbjct: 87  FNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHII 146

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G   D  V  S LV M+ T GD +    +F ++    V  W  ++  ++K G+     
Sbjct: 147 KHGFEKDVYVQNS-LVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGD----- 200

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                            V+ A KLFD++ ++++V+W+ MISGY 
Sbjct: 201 ---------------------------------VESARKLFDQMPEKNLVTWSTMISGYA 227

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            N   +K +E+FK + + G   +   MV+V+S CA+ GAL  G   H + +K   +  + 
Sbjct: 228 QNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLI 287

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               L+DMY++CG +D A+ VFE + ER  +SWT++IAG A  G  + +++ F  MV  G
Sbjct: 288 LGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAG 347

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADA 422
           + P     T++L AC+  GL+E G  + + +K ++ ++  L     ++D+  + G + +A
Sbjct: 348 LTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEA 407

Query: 423 ESVFNQMPVK-DIVSWNTMIGA 443
           E    +MPVK +   W  ++GA
Sbjct: 408 ERFVLKMPVKPNAPVWGALLGA 429



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 162/359 (45%), Gaps = 43/359 (11%)

Query: 207 CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
           C+     +  +  A ++F ++ + ++  +N MI G+  +   ++    + +    G   D
Sbjct: 59  CVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPD 118

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             T   ++  C     +  G   H   +K  F K++   N+L+ MY+  GD + A  +F+
Sbjct: 119 NLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQ 178

Query: 327 KMGERSVVSWTS-------------------------------MIAGYAREGVFDGAIRL 355
           +M    VVSWTS                               MI+GYA+   FD A+ L
Sbjct: 179 RMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVEL 238

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           F+ +  +G+  +   + S++ +CA  G LE+G+  HDY+ +N M  +L +  AL+DMYA+
Sbjct: 239 FKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYAR 298

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGALDL----------FVAMLQ-NFEPDGVTMACI 464
           CGS+  A  VF  +P +D +SW  +I  L +          F  M++    P  +T   +
Sbjct: 299 CGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAV 358

Query: 465 LPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
           L AC+    +ERG +I   + R H +         +VD+  + G L  A      +P K
Sbjct: 359 LSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVK 417


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/706 (33%), Positives = 384/706 (54%), Gaps = 70/706 (9%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           MF   G ++  R++F+ I +   F W +++  Y+++G+   +  +F +M    +     +
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLG----S 56

Query: 201 FSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
           ++ +L   A+ G+    ++A  LFD + +RD+++W  M++        E     F +M  
Sbjct: 57  WTALLSAFALSGHH---EEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPE 113

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
                DL     +L+  A  G +   R            + +    +LL  Y + GD+  
Sbjct: 114 R----DLVAWTAMLAANAERGQMENARET----FDQMPERNLFSWTSLLSAYGRSGDVKA 165

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A RVF+ M E ++V+WT+M+ GY+  G    A R F  M     E D+ A T++L A A 
Sbjct: 166 AGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMP----ERDLIAWTAMLSAYAF 221

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
           +G L        Y +E                            +F +MP +D++SW TM
Sbjct: 222 NGHLR-------YTRE----------------------------IFQRMPERDLISWATM 246

Query: 441 IGAL----------DLF------VAMLQNFEPDGVTMACILPACASLAALERGREIHGYI 484
           + AL          +LF       A+ +   P+ VT   +L AC+ L AL  GR+IH  +
Sbjct: 247 VAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAV 306

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
              G   D  V+NA+V+ Y +CG L  A+ +FD +  +D+ISW+ MI+ +   G   +A+
Sbjct: 307 AERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAM 366

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
             ++ M   G  PD++ FISVL+ACS+SG+V+    FF  +  +  +EP LEHYACMVD+
Sbjct: 367 ELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDV 426

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
           L R G L +A   + +MP  P   ++ ++L  C+++ +V+  E  AE VFEL+P+N+  Y
Sbjct: 427 LGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPY 486

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
           + LAN+Y+ A++ ++  ++R+ +  RG+KK PGCSWIE+  +V+ F+AG   HP   +I 
Sbjct: 487 ITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIY 546

Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVT 784
           + ++RL  +MK  GYF  T+  L + +E EKE  L  HSEKLA+AFG+++ P G  +R+ 
Sbjct: 547 AEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIV 606

Query: 785 KNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KNLRVC DCH   K +SK   REI++RD+NRFHHF++G CSC  +W
Sbjct: 607 KNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 178/389 (45%), Gaps = 41/389 (10%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D   + ++L   A+   +E+ ++    + E  +        + L+  +   GD+K   RV
Sbjct: 115 DLVAWTAMLAANAERGQMENARETFDQMPERNLFS-----WTSLLSAYGRSGDVKAAGRV 169

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+ +    +  W  ++  YS +G+   +   F  M    + A    ++ +L   A  G+ 
Sbjct: 170 FDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIA----WTAMLSAYAFNGHL 225

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM-----LNLGFNVDLAT 269
           R  ++   +F  + +RD++SW  M++  + N + E+  E+F  M     L+ G   +  T
Sbjct: 226 RYTRE---IFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVT 282

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            +T+L  C+  GAL  GR +HA   +  F  ++  +N L++ Y +CG L  A  VF+ M 
Sbjct: 283 FITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMR 342

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            R V+SW+SMI+ +A+ G  D A+ L+  M+ EG  PD     S+L AC+  G++E   D
Sbjct: 343 RRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGD 402

Query: 390 -VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFV 448
                + +  ++ +L     ++D+  + G + DAE +   MP                  
Sbjct: 403 FFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMP------------------ 444

Query: 449 AMLQNFEPDGVTMACILPACASLAALERG 477
                F P  +    +L AC     +ERG
Sbjct: 445 -----FHPGPLLYMTMLSACKLYTDVERG 468



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 197/440 (44%), Gaps = 81/440 (18%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           ++ ++   GDL   + VF+++    +  W  L+  ++ +G+ +E+  LF  MQ   + A 
Sbjct: 29  MLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDLIA- 87

Query: 198 SYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
              ++ +L  LA   N   ++DA   FD++ +RD+V+W  M++     G  E   E F +
Sbjct: 88  ---WTIMLTVLATFSN---IEDAKYHFDQMPERDLVAWTAMLAANAERGQMENARETFDQ 141

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN----NTLLDMYS 313
           M       +L +  ++LS         +GR+    A    F     +N      +L  YS
Sbjct: 142 MPER----NLFSWTSLLSA--------YGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYS 189

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG-------------------------- 347
             GD+  A R F+ M ER +++WT+M++ YA  G                          
Sbjct: 190 LSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAA 249

Query: 348 -----VFDGAIRLFRGMVR-----EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
                + + +  LF  M R     +G+ P+     ++L AC+  G L  G+ +H  + E 
Sbjct: 250 LVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAER 309

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
              + L VSNAL++ Y +CG++ DA+ VF+ M  +D++SW++MI           A++L+
Sbjct: 310 GFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELY 369

Query: 448 VAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI------V 500
             ML +   PD +    +L AC++   +    E  G   R  I  D  V   +      V
Sbjct: 370 HRMLSEGTLPDDIIFISVLFACSNSGVV----EASGDFFR-SIVGDTQVEPTLEHYACMV 424

Query: 501 DMYVKCGVLVLARSLFDMIP 520
           D+  + G L  A  L  ++P
Sbjct: 425 DVLGRAGKLRDAEDLLRLMP 444


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/696 (34%), Positives = 378/696 (54%), Gaps = 59/696 (8%)

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           + E R VF+K+    V+++ +++  Y++   F  +L LF +M    + + +        C
Sbjct: 11  IDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDC 70

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
             +         A KLFDE+ +R VVSW  MI+G++  G  E    +F +M         
Sbjct: 71  ADLTM-------ARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKM--------- 114

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
                                   F       ++I+  N+++  Y   G ++  +R+F++
Sbjct: 115 -----------------------PF-------RDIAAWNSMIYGYCCNGRVEDGLRLFQE 144

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVYAITSILHACACDGLLE 385
           M  R+V+SWTSMI G  + G  + A+ LFR M+  G+E  P       ++ ACA    L 
Sbjct: 145 MPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALY 204

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---- 441
            G  +H ++ +       Y+S AL+  YA C  M D+  VF+     ++V W  ++    
Sbjct: 205 QGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYG 264

Query: 442 ------GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  AL +F  M+ +   P+  +    L +C  L AL+ GREIH   ++ G+  D  
Sbjct: 265 LNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVF 324

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           V N+++ MY +CG L     +F  I  K+++SW  +I G   HG G  A+A FN M ++ 
Sbjct: 325 VGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSM 384

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           +EPDE++F  +L ACSHSG+  +G   F       + E KL+HYACMVD+L R+G L EA
Sbjct: 385 VEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEA 444

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
              I  MPV  ++ +W  LL  C +H ++++AE+ A+ + +LEP  +  YVLL+N+YA A
Sbjct: 445 EELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASA 504

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +W +V ++R ++ +RG+ K PG SWI IKG  N F++G  SHP + +I   L+ L  ++
Sbjct: 505 SRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKL 564

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           K  GY P  R+AL + ++ +KEV L  HSE+LA+ FG+++   G TI V KNLRVCGDCH
Sbjct: 565 KELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCH 624

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              K ++K  RR+I++RDS RFHHF DGRCSC  +W
Sbjct: 625 SAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 229/488 (46%), Gaps = 62/488 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICES 125
           Y   I  +      + A+++ Y  E    D  ++ S+++ C D   L   +K+   + E 
Sbjct: 29  YTMMITGYARNYRFDHALQLFY--EMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPER 86

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
            +V       + ++  F+  G ++    +F K+    +  WN +++ Y   G  ++ L L
Sbjct: 87  SVVS-----WTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRL 141

Query: 186 FKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
           F++M                                        R+V+SW  MI G   +
Sbjct: 142 FQEMPC--------------------------------------RNVISWTSMIGGLDQH 163

Query: 246 GVAEKGLEVFKEMLNLGFNVDL--ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
           G +E+ L +F++M+  G  V    +T   V++ CAN  AL  G  +HA   K  +S +  
Sbjct: 164 GRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAY 223

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
            +  L+  Y+ C  ++ ++RVF      +VV WT+++ GY      + A+++F  M+REG
Sbjct: 224 ISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREG 283

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           + P+  + TS L++C     L+ G+++H    +  +++ ++V N+L+ MY +CG++ D  
Sbjct: 284 VLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGV 343

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNF-EPDGVTMACILPACASLA 472
            +F ++  K+IVSWN++I           AL  F  M+++  EPD +T   +L AC+   
Sbjct: 344 VIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSG 403

Query: 473 ALERGREIHGYILRHGISADRNVAN--AIVDMYVKCGVLVLARSLFDMIPAK-DLISWTI 529
             ++GR +  Y      SA+  + +   +VD+  + G L  A  L   +P K + + W +
Sbjct: 404 MSQKGRCLFKY-FSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLV 462

Query: 530 MIAGYGMH 537
           +++   MH
Sbjct: 463 LLSACTMH 470



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 94/427 (22%), Positives = 168/427 (39%), Gaps = 78/427 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++ + IG   + G  E+A+    +++    + K  + TYC ++  CA+  +L  G ++H+
Sbjct: 152 SWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHA 211

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            + + G   D   + + L+  +  C  +++  RVF+   +  V IW  L+  Y      +
Sbjct: 212 HVFKLGYSFD-AYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHE 270

Query: 181 ESLYLFKKMQSLGIAADSYTFS------CVLKCL------------------AVVGNSRR 216
           ++L +F +M   G+  +  +F+      C L+ L                    VGNS  
Sbjct: 271 DALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLI 330

Query: 217 V--------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
           V         D   +F  +S +++VSWN +I G   +G     L  F +M+      D  
Sbjct: 331 VMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEI 390

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T   +LS C++ G    GR         C  K  S N                     K 
Sbjct: 391 TFTGLLSACSHSGMSQKGR---------CLFKYFSEN---------------------KS 420

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            E  +  +  M+    R G  + A  L R M    ++ +      +L AC     LE+ +
Sbjct: 421 AEVKLDHYACMVDILGRSGKLEEAEELIRNM---PVKANSMVWLVLLSACTMHSKLEVAE 477

Query: 389 DVHDYIKENDMQ-SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV-----SWNTMIG 442
                I + +   SS YV   L ++YA     +D   +  +M  + I      SW T+ G
Sbjct: 478 RAAKCIIDLEPHCSSAYV--LLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKG 535

Query: 443 ALDLFVA 449
             + F++
Sbjct: 536 WRNEFLS 542


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/694 (35%), Positives = 380/694 (54%), Gaps = 35/694 (5%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+   +K  + +  + L   +  LG  +D+   + ++   A  G    +  A ++F  + 
Sbjct: 223 LLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGE---LDMAGEVFGGMR 279

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGR 287
           DR+VVSW  ++ G++ +G A   L +  EM        +  T+   L  C     +  G 
Sbjct: 280 DRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGV 339

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYARE 346
            +H   ++  + +     ++L+ +YSK G +  A RVF+  G  R + +W +MI+GYA  
Sbjct: 340 GIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHA 399

Query: 347 GVFDGAIRLFRGMV------REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
           G    A+ +FR M        +  +PD +   S+L AC   G    G  VH  +  +   
Sbjct: 400 GHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFS 459

Query: 401 --SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFV 448
             S+  ++ AL+DMY KCG +  A  VF ++  K+ + W T++           AL+LF 
Sbjct: 460 TASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFR 519

Query: 449 AMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
              ++    D   ++ I+   A  A +E+GR++H Y ++     D +  N+IVDMY+KCG
Sbjct: 520 RFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCG 579

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
           +   A  +F  IPA++++SWT MI G G HG G +A+A F +MR  G+EPDEV+++++L 
Sbjct: 580 LPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLS 639

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSH+GLVDE  R+F+ +R +  + PK EHYACMVDLL R G L EA   I  MP+ P  
Sbjct: 640 ACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTV 699

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            +W +LL  CR+H +V +  +  + +  ++ DN   YV L+NV+AEA  W E  K+R+ +
Sbjct: 700 GVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAM 759

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGS--SHPHAKKIESLLKRLRLEMKRE-GY-FPKT 743
            RRGLKK  GCSW+EI  +V+ F  GG   +HP A  I  +L+ +   ++ + GY     
Sbjct: 760 RRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYCADDV 819

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILN-------LPAGQTIRVTKNLRVCGDCHEM 796
           ++AL + DE  +  +L  HSE+LA+   +L            Q IRV KNLRVCGDCHE 
Sbjct: 820 QFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHRQPIRVYKNLRVCGDCHEF 879

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            K +S   RR +V+RD+NRFH F+ G CSC+ +W
Sbjct: 880 FKGLSAVVRRALVVRDANRFHRFEHGTCSCKDYW 913



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 223/501 (44%), Gaps = 66/501 (13%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           K    +L+  A   SL  G ++H  + + G    D +LG+ L+ M+  CG+L     VF 
Sbjct: 218 KMIADLLRASAKGSSLRGGVQLHGALTKLGFG-SDTMLGNNLIDMYAKCGELDMAGEVFG 276

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA-DSYTFSCVLKCLAVV---- 211
            + +  V  W  LM  + + G+    L L  +M++   AA + YT S  LK   V     
Sbjct: 277 GMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMG 336

Query: 212 ----------------------------GNSRRVKDAHKLFDELS-DRDVVSWNCMISGY 242
                                           R+ DA ++FD     R + +WN MISGY
Sbjct: 337 AGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGY 396

Query: 243 IANGVAEKGLEVFKEMLNLG------FNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
              G     L VF+EM             D  T  ++L  C   GA   G  VHA    +
Sbjct: 397 AHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAAS 456

Query: 297 CFSKEIS--FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
            FS   +      L+DMY KCG L  A++VFE++  ++ + WT+++ G+A+EG    A+ 
Sbjct: 457 GFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALE 516

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LFR   R G   D + ++SI+   A   L+E G+ VH Y  ++   + +   N+++DMY 
Sbjct: 517 LFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYL 576

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIGALDLF------VAMLQNF-----EPDGVTMAC 463
           KCG   +AE +F ++P +++VSW TMI  L         VAM +       EPD VT   
Sbjct: 577 KCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLA 636

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANA------IVDMYVKCGVLVLARSLFD 517
           +L AC+    ++  R     I R     DR V         +VD+  + G L  AR L  
Sbjct: 637 LLSACSHAGLVDECRRYFSCIRR-----DRTVRPKAEHYACMVDLLGRAGELREARDLIR 691

Query: 518 MIPAKDLIS-WTIMIAGYGMH 537
            +P +  +  W  +++   +H
Sbjct: 692 TMPMEPTVGVWQTLLSACRVH 712



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 167/407 (41%), Gaps = 77/407 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--------SEKSKIDTKTYCSILQLCADLKSLEDGK 116
            +NA I  +   G+   A+ V            ++ + D  T+ S+L+ C  L +  +G 
Sbjct: 388 TWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGA 447

Query: 117 KVHSIICESGI-VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           +VH+ +  SG     + +L   LV M+V CG L    +VF +++      W  ++  +++
Sbjct: 448 QVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQ 507

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL---AVVGNSRRV--------------- 217
            G   E+L LF++    G  AD++  S ++  L   A+V   R+V               
Sbjct: 508 EGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSA 567

Query: 218 --------------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
                          +A ++F E+  R+VVSW  MI+G   +G+  + + +F+EM   G 
Sbjct: 568 GNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGV 627

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             D  T + +LS C+           HA  +  C              Y  C   D  +R
Sbjct: 628 EPDEVTYLALLSACS-----------HAGLVDEC------------RRYFSCIRRDRTVR 664

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
              +        +  M+    R G    A  L R M    +EP V    ++L AC     
Sbjct: 665 PKAE-------HYACMVDLLGRAGELREARDLIRTMP---MEPTVGVWQTLLSACRVHKD 714

Query: 384 LEIGKDVHDYIKENDMQSSL-YVSNALMDMYAKCGSMADAESVFNQM 429
           + +G++  D +   D  + + YV+  L +++A+ G+  +   V + M
Sbjct: 715 VAVGREAGDVLLAIDGDNPVNYVT--LSNVFAEAGAWRECHKVRDAM 759



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 21/286 (7%)

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           I  +L A A    L  G  +H  + +    S   + N L+DMYAKCG +  A  VF  M 
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMR 279

Query: 431 VKDIVSWNTMI----------GALDLFVAMLQNFE--PDGVTMACILPACASLAALERGR 478
            +++VSW  ++          G L L   M    E  P+  T++  L AC     +  G 
Sbjct: 280 DRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGV 339

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
            IHG  +R G      VA+++V +Y K G +  AR +FD     + L +W  MI+GY   
Sbjct: 340 GIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHA 399

Query: 538 GFGCDAIATFNDMRQAGI------EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC-N 590
           G G DA+  F +MR+         +PDE +F S+L AC   G   EG +    M     +
Sbjct: 400 GHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFS 459

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
                     +VD+  + G L  A +  E +    +A  W +++ G
Sbjct: 460 TASNAILAGALVDMYVKCGRLPVAMQVFERLE-RKNAIQWTTVVVG 504


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 260/799 (32%), Positives = 415/799 (51%), Gaps = 76/799 (9%)

Query: 16  SPPNQSYGKKFASYKPSTLPIIVSS----KSHSSCTI-------NPISASISKTLVCKTK 64
           SP    Y  +F    PS  P  +S+     S  SC++       NPI    SK L  K +
Sbjct: 9   SPLLPLYPDQFNLQTPSKTPHHISNLVIVTSPVSCSLRFQKFNYNPIQKWSSKPLSTKIQ 68

Query: 65  NY------NAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCS-ILQLCADLKSLEDG 115
            +      N  I  + E G  + A+ V      +  K++   Y   +++    L  +  G
Sbjct: 69  TFVSVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKG 128

Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           +++H  + + G++ D  V+ S L+ M+  CG +++  ++F K+    +  WN ++  + K
Sbjct: 129 RQIHGHVLKLGVLDDVSVVNS-LLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQK 187

Query: 176 TGNFKESLYLFKKM-----------------------QSL-------------GIAADSY 199
           + ++  SL  F+ M                       QSL             G+  + Y
Sbjct: 188 SMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEY 247

Query: 200 TFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEV 254
             S +++     G+   +K+A  +F+ + D+D V      WN MISGY++NG   + L +
Sbjct: 248 LVSSLIEMYMKCGS---IKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLL 304

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
           F +M+  G   D +TMV++ S C+    + FG+ +H    K      I     LLDMY K
Sbjct: 305 FIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLK 364

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
           CGD+   +++F +    +++ W+++I+  A+ G    A+ LF     E    D   + ++
Sbjct: 365 CGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAV 424

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L AC+   L   G  +H    +    S ++V +AL+D+YAKC  M  ++ VF ++  KD+
Sbjct: 425 LRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDL 484

Query: 435 VSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGY 483
           VSWN +I           AL  F  M L+   P+ VT+ACIL  CA L+ +   +E+HGY
Sbjct: 485 VSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGY 544

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
           ++R G+ +   V+N+++  Y KCG +  +   F+ +P ++ +SW  +I G GMH    + 
Sbjct: 545 LIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEM 604

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           I  F+ M  +GI+PD V+F ++L ACSH+G VDEG ++F  M  + N++P+LE Y CMVD
Sbjct: 605 IVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVD 664

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY 663
           LL R G+L++AY  I  MP  PD  IWGSLL  C+ H +  LAE VA H+F+L P + GY
Sbjct: 665 LLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGY 724

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
            VLLAN+Y    K  E  K+R +I   GLKK PGCSWIE+    +IF+AG  SH  + +I
Sbjct: 725 RVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIAGDRSHSQSDEI 784

Query: 724 ESLLKRLRLEMKREGYFPK 742
            + ++ L  E+KR GY P+
Sbjct: 785 YAAVESLTTEIKRAGYIPQ 803


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/600 (39%), Positives = 365/600 (60%), Gaps = 14/600 (2%)

Query: 243 IANGVAEKGLEVFKEMLNLGFN-VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           I+N +AE+     KE++ +G     ++ +  +L   A   A + G A HA  ++     +
Sbjct: 24  ISNAMAERPSS--KELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRAD 81

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
              +N L++MYSKCG ++ A ++F++M  RS+VSW +M+  + + G  + A+ LF  M +
Sbjct: 82  TITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQK 141

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           EG     + ++S++ ACA    +   K +H +  +  + S+++V  AL+D+YAKCG + D
Sbjct: 142 EGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKD 201

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLF-VAMLQNFEPDGVTMACILPACAS 470
           A  VF  MP +  V+W++M+           AL LF  A     E +  T++  L ACA+
Sbjct: 202 ANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAA 261

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
            AAL  G+++     + GI ++  V ++++DMY KCG++  A ++F  +  K+++ W  +
Sbjct: 262 RAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAI 321

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           ++G+  H    +A+  F  M+Q GI P+++++ISVL ACSH GLV++G ++F++M    N
Sbjct: 322 LSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHN 381

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           + P + HY+CMVD+L R G L EA  FI+ MP    A++WGSLL  CRI+  ++LAE  A
Sbjct: 382 VSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAA 441

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
           +H+FE+EP N G +VLL+N+YA  ++WEEV + R  +     KK  G SWIEIK KV+ F
Sbjct: 442 KHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSF 501

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
           + G  +HP   +I   L+ L  EMK+ GY  KT + L + +E  K+  L  HSEKLA+ F
Sbjct: 502 MVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTF 561

Query: 771 GILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           GI+ LP G  IR+ KNLR+CGDCH   K  S    REI++RD+NRFHHFK+G CSC  FW
Sbjct: 562 GIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 621



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 185/341 (54%), Gaps = 15/341 (4%)

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
           +G+ AD+ T + ++   +  G    V+ A KLFDE+  R +VSWN M+  +  NG  EK 
Sbjct: 76  VGLRADTITSNMLMNMYSKCG---LVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKA 132

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           L +F +M   G +    T+ +V+  CA    +   + +H FALK      +     LLD+
Sbjct: 133 LVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDV 192

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+KCG +  A  VFE M ERS V+W+SM+AGY +  +++ A+ LF      G+E + + I
Sbjct: 193 YAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTI 252

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
           +S L ACA    L  GK V     +  + S+++V ++L+DMYAKCG + +A +VF+ +  
Sbjct: 253 SSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEE 312

Query: 432 KDIVSWNTMIGALDLFVAMLQN---FE--------PDGVTMACILPACASLAALERGREI 480
           K++V WN ++      V  L+    FE        P+ +T   +L AC+ L  +E+GR+ 
Sbjct: 313 KNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKY 372

Query: 481 HGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
              ++R H +S +    + +VD+  + G+L  A+   D +P
Sbjct: 373 FDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMP 413



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 192/380 (50%), Gaps = 35/380 (9%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +LQ  A  ++  +G   H+ I   G+  D  +  + L+ M+  CG ++  R++F+++   
Sbjct: 53  LLQSSARNRAAIEGMACHAQIIRVGLRADT-ITSNMLMNMYSKCGLVESARKLFDEMPVR 111

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS----------CVLKC---- 207
            +  WN ++  +++ G+ +++L LF +MQ  G +   +T S          CV +C    
Sbjct: 112 SLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLH 171

Query: 208 ------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                             L V      VKDA+ +F+ + +R  V+W+ M++GY+ N + E
Sbjct: 172 GFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYE 231

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L +F     +G   +  T+ + LS CA   AL+ G+ V A + K      I   ++L+
Sbjct: 232 EALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLI 291

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           DMY+KCG ++ A  VF  + E++VV W ++++G++R      A+  F  M + GI P+  
Sbjct: 292 DMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDI 351

Query: 370 AITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
              S+L AC+  GL+E G+   D  I+ +++  ++   + ++D+  + G + +A+   ++
Sbjct: 352 TYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDR 411

Query: 429 MPVKDIVS-WNTMIGALDLF 447
           MP     S W +++ +  ++
Sbjct: 412 MPFDATASMWGSLLASCRIY 431



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/315 (20%), Positives = 143/315 (45%), Gaps = 39/315 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +G   + G+ EKA+ +    +K        T  S++  CA    + + K++H   
Sbjct: 115 SWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFA 174

Query: 123 CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            ++   +D  V +G+ L+ ++  CG +K+   VF  +       W+ ++  Y +   ++E
Sbjct: 175 LKTA--LDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEE 232

Query: 182 SLYLFKKMQSLGIAADSYTFSC------------------VLKCLAVVGNSRRV------ 217
           +L LF + Q++G+  + +T S                    + C   +G++  V      
Sbjct: 233 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLID 292

Query: 218 --------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                   ++A+ +F  + +++VV WN ++SG+  +  + + +  F++M  +G   +  T
Sbjct: 293 MYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 352

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            ++VLS C++ G +  GR      ++    S  +   + ++D+  + G L  A    ++M
Sbjct: 353 YISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRM 412

Query: 329 GERSVVS-WTSMIAG 342
              +  S W S++A 
Sbjct: 413 PFDATASMWGSLLAS 427


>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 213/517 (41%), Positives = 317/517 (61%), Gaps = 18/517 (3%)

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           LD A+ +F      ++  + ++I G A    F+G++  F  M+R  I PD   +  +L +
Sbjct: 88  LDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKS 147

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD---- 433
            A    + +G+ +H  + +  ++   +V  +L+DMY K G +     +F++ P ++    
Sbjct: 148 VAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAES 207

Query: 434 IVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
           I+ WN +               P+ +T+   L AC  + AL+ G  IH Y+  +G   +R
Sbjct: 208 ILLWNGV--------------RPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNR 253

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            +  A+VDMY KCG +  A  +F     KDL++W++MI G+ +HG    A+  F  M+ A
Sbjct: 254 GIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSA 313

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           GI PDEV F+++L ACSHSG VD+G  FF  MR + +IEP ++HY  +VDLL R G L E
Sbjct: 314 GINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDE 373

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A  FI+ MP+ PD  IWG+L C CR H  +++AE  AE + +LEP + G YV L+NVYA 
Sbjct: 374 ALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAA 433

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
             +WE+V+++R  +  RG++K+PG S+IE++G+V+ FVAG  +H  A++I   L+ +   
Sbjct: 434 VGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITAS 493

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
            K+EGY P+T + L N +E EKE AL  HSEKLA+AFG+++   G TIR+ KNLRVCGDC
Sbjct: 494 AKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDC 553

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H M K+ SK +RREI+LRD  RFHHFKDG CSC  +W
Sbjct: 554 HSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 590



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 142/306 (46%), Gaps = 19/306 (6%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           +F   D+  +F++N L+   ++   F+ S+  F  M  L I  D  T   VLK +A + +
Sbjct: 94  IFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVD 153

Query: 214 SRRVKDAH----KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE----------ML 259
               +  H    KL  E      VS   ++  Y+  G    GL++F E          +L
Sbjct: 154 VGLGRCLHGGVMKLGLEFDSFVRVS---LVDMYVKIGELGFGLQLFDESPQRNKAESILL 210

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
             G   +  T+V+ L  C   GAL  G  +H +     F         L+DMY+KCG++ 
Sbjct: 211 WNGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIK 270

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A RVF +   + +++W+ MI G+A  G FD A++ F  M   GI PD     +IL AC+
Sbjct: 271 SASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACS 330

Query: 380 CDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSW 437
             G ++ G +  + ++ +  ++ ++     ++D+  + G + +A S    MP+  D V W
Sbjct: 331 HSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIW 390

Query: 438 NTMIGA 443
             +  A
Sbjct: 391 GALFCA 396


>gi|449440223|ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 629

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/623 (38%), Positives = 357/623 (57%), Gaps = 19/623 (3%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           AH++FD++   D  +WN +I  ++ NG     +  +++ML  G   D  T+  ++     
Sbjct: 12  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 71

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
            G L  G+ +HA A K  FS  +    +L+++Y      D A  + +K   R+ VSWT +
Sbjct: 72  YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 131

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
              Y RE     A+ LF  MV    + D  A+ + + AC    +L  G+++H   + + +
Sbjct: 132 AKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGL 191

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
           + ++ VSN+L+ MY  C S+ DA   F+QMP KDI+SW  +I           A  LF  
Sbjct: 192 EFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQ 251

Query: 450 MLQNFE--PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
           M  + E  PD  T++ ILPAC  +AA + G+EIHGY++++    +  V NA+VDMYVK G
Sbjct: 252 MNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSG 311

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVL 566
            +  A   F M+  KD++SW+IM  GY +HG G   ++ F +M +   +  DE+++ +VL
Sbjct: 312 CIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVL 371

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
           +AC+ + +VDEG  +F+     C  +P + H A  V LL+R G L EA  F+E   +   
Sbjct: 372 HACTTANMVDEGDSYFS-----CITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKH 426

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
             I  +LL GCR H + KL +++ E + +LEP N   Y+LL+N YA  EKW+ V+KLRE 
Sbjct: 427 PEILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRET 486

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           I   GL+     SWIE   K+++F  G  SHP ++ I   L+ L  EM+ +G  P   ++
Sbjct: 487 IRDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFS 546

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
           L + DE E+E    GHSE LA++FG+++  AG+TIR+TKNLRVC  CHE AKF+SK   R
Sbjct: 547 LHDVDE-ERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGR 605

Query: 807 EIVLRDSNRFHHFKDGRCSCRGF 829
           EI+++D   FHHFKDG CSC  F
Sbjct: 606 EIIVKDPYVFHHFKDGCCSCENF 628



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 165/372 (44%), Gaps = 45/372 (12%)

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
             +VF+ I     F WN L+  +   G+    +  +++M   G+  D +T   ++     
Sbjct: 12  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 71

Query: 211 VGNSRRVKDAHK--------------------------------LFDELSDRDVVSWNCM 238
            G+ +  K  H                                 L D+ + R+ VSW  +
Sbjct: 72  YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 131

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
              Y+        L++F +M+ L  ++D   + T +  C     L  GR +H  A     
Sbjct: 132 AKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGL 191

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
              I  +N+LL MY  C  +  A   F++M  + ++SWT +I  Y ++G  + A +LFR 
Sbjct: 192 EFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQ 251

Query: 359 MVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
           M  +G ++PD   I+SIL AC      + GK++H Y+ +N    +L V NAL+DMY K G
Sbjct: 252 MNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSG 311

Query: 418 SMADAESVFNQMPVKDIVSWNTMI--------GAL--DLFVAMLQNFE--PDGVTMACIL 465
            +  A   F+ M  KD+VSW+ M         G L   LF  M +NF+   D +T   +L
Sbjct: 312 CIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVL 371

Query: 466 PACASLAALERG 477
            AC +   ++ G
Sbjct: 372 HACTTANMVDEG 383



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 108/268 (40%), Gaps = 39/268 (14%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           ID     + +  C  LK L  G+ +H +    G+  +  V  S L+ M++ C  +K+ R 
Sbjct: 158 IDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNS-LLKMYIDCDSIKDARG 216

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVG 212
            F+++ +  +  W  L+H Y K G   E+  LF++M   G +  D  T S +L     + 
Sbjct: 217 FFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMA 276

Query: 213 NSRRVKDAH--------------------------------KLFDELSDRDVVSWNCMIS 240
             +  K+ H                                K F  + ++D+VSW+ M  
Sbjct: 277 AHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTL 336

Query: 241 GYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           GY  +G  + G+ +F+EM  N     D  T   VL  C     +  G +  +   K   +
Sbjct: 337 GYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGDSYFSCITKPTVA 396

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEK 327
             I+    LL   ++ G LD A    EK
Sbjct: 397 -HIALKVALL---ARAGRLDEARTFVEK 420



 Score = 46.6 bits (109), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 2/114 (1%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D +T  SIL  C  + + + GK++H  + ++    ++ ++ + LV M+V  G ++   
Sbjct: 259 KPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFD-ENLIVQNALVDMYVKSGCIQSAS 317

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSCVL 205
           + F+ +    +  W+++   YS  G  K  + LF++M+ +  +  D  T++ VL
Sbjct: 318 KTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVL 371


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/622 (38%), Positives = 338/622 (54%), Gaps = 12/622 (1%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A ++F E+  RD V++N M+ G    G   + L++F  M   G      T  TVL+    
Sbjct: 194 ARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATG 253

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
            G L  GR VH    +A  S  +  NN+LLD YSKC  LD   ++F +M ER  VS+  M
Sbjct: 254 VGDLCLGRQVHGLVARAT-SSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVM 312

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           IAGYA        +RLFR M     +       S+L        + IGK +H  +    +
Sbjct: 313 IAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGL 372

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
            S   V NAL+DMY+KCG +  A++ F     K  VSW  MI           AL LF  
Sbjct: 373 SSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCG 432

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M +    PD  T +  + A ++LA +  GR++H Y++R G  +     +A++DMY KCG 
Sbjct: 433 MRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGC 492

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  A   FD +P ++ ISW  +I+ Y  +G   +AI  F  M   G +PD V+F+SVL A
Sbjct: 493 LDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSA 552

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSH+GL +E  ++F +M YE  I P  EHY+C++D L R G   +    +  MP   D  
Sbjct: 553 CSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPI 612

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           IW S+L  CR H    LA   AE +F +   +   YV+L+N++A+A KWE+   +++ + 
Sbjct: 613 IWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMR 672

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
            RGL+K  G SW+E+K KV  F +   ++P   +I+  L+RL  EM ++GY P T   L 
Sbjct: 673 DRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQ 732

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
             D+  K  +L  HSE+LA+AF ++N P G  IRV KNL  C DCH   K MSK   R+I
Sbjct: 733 QVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDI 792

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           ++RDS+RFHHFKDG CSC  +W
Sbjct: 793 IVRDSSRFHHFKDGFCSCGDYW 814



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 263/525 (50%), Gaps = 34/525 (6%)

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE 226
           NLL+H    +G   ++  LF +M     A     FS + + L+    S ++  AH LF  
Sbjct: 38  NLLLHSLISSGRLAQARALFDQMPHRNNA-----FS-LNRMLSGYSRSGQLSAAHHLF-- 89

Query: 227 LSD----RDVVSWNCMISGYIA--NGVAEKGLEVFKEMLNLGFNVDLATMVTVLS---GC 277
           LS     RD V+W  MI  + +     A   + +F++ML  G   D  T+ TVL+     
Sbjct: 90  LSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPAS 149

Query: 278 ANCGALMFGRAVHAFALK-ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
               A +   ++H FALK       +   NTLLD Y K G L  A RVF++M  R  V++
Sbjct: 150 GGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTY 209

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            +M+ G ++EG    A+ LF  M R+G+    +  +++L      G L +G+ VH  +  
Sbjct: 210 NAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR 269

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDL 446
               S+++V+N+L+D Y+KC  + + + +F++M  +D VS+N MI            L L
Sbjct: 270 A-TSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRL 328

Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M   +F+   +  A +L    S+  +  G++IH  ++  G+S++  V NA++DMY K
Sbjct: 329 FREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSK 388

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           CG+L  A++ F     K  +SWT MI G   +G   +A+  F  MR+AG+ PD  +F S 
Sbjct: 389 CGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSST 448

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           + A S+  ++  G +  + +    ++       A ++D+ ++ G L EA +  + MP   
Sbjct: 449 IKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSA-LLDMYTKCGCLDEALQTFDEMP-ER 506

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHV--FELEPDNTGYYVLLA 668
           ++  W +++     + + K A K+ E +  +  +PD+  +  +L+
Sbjct: 507 NSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLS 551



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 227/467 (48%), Gaps = 48/467 (10%)

Query: 118 VHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
           +H    + G++  + V+ + L+  +   G L   RRVF ++ +     +N +M   SK G
Sbjct: 161 LHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEG 220

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN---SRRVK---------------- 218
           +  E+L LF  M+  G+AA  +TFS VL     VG+    R+V                 
Sbjct: 221 SHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSSNVFVNNS 280

Query: 219 ------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                       +  KLF E+ +RD VS+N MI+GY  N  A   L +F+EM +L F+  
Sbjct: 281 LLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQ 340

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
                ++LS   +   +  G+ +HA  +    S E    N L+DMYSKCG LD A   F 
Sbjct: 341 ALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFI 400

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
              +++ VSWT+MI G  + G  + A++LF GM R G+ PD    +S + A +   ++ +
Sbjct: 401 NKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGL 460

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
           G+ +H Y+  +   SS++  +AL+DMY KCG + +A   F++MP ++ +SWN +I     
Sbjct: 461 GRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAH 520

Query: 443 ------ALDLFVAML-QNFEPDGVTMACILPACASLAALE---RGREIHGYILRHGISAD 492
                 A+ +F  ML   F+PD VT   +L AC+     E   +  E+  Y   +GIS  
Sbjct: 521 YGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEY--EYGISPW 578

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
           +   + ++D   + G     + +   +P   D I W+ ++     HG
Sbjct: 579 KEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHG 625



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 22/234 (9%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           MV+ G +P  Y +  +LH+    G L   + + D +   +   SL   N ++  Y++ G 
Sbjct: 25  MVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSL---NRMLSGYSRSGQ 81

Query: 419 MADAESVFNQMP--VKDIVSWNTMIG------------ALDLFVAML-QNFEPDGVTMAC 463
           ++ A  +F   P  ++D V+W  MIG            A+ LF  ML +   PD VT+A 
Sbjct: 82  LSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVAT 141

Query: 464 IL---PACASLAALERGREIHGYILRHG-ISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           +L   PA    AA      +H + L+ G + ++  V N ++D Y K G+L  AR +F  +
Sbjct: 142 VLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEM 201

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
           P +D +++  M+ G    G   +A+  F  MR+ G+     +F +VL   +  G
Sbjct: 202 PHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVG 255



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 155/366 (42%), Gaps = 81/366 (22%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVF-NK 157
           Y S+L +   +  +  GK++H+ +   G+  +D ++G+ L+ M+  CG L   +  F NK
Sbjct: 344 YASLLSVAGSVPHIGIGKQIHAQLVLLGLSSED-LVGNALIDMYSKCGMLDAAKTNFINK 402

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNS 214
            D   V  W  ++    + G  +E+L LF  M+  G++ D  TFS  +K    LA++G  
Sbjct: 403 NDKTGV-SWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLG 461

Query: 215 RRVK-----------------------------DAHKLFDELSDRDVVSWNCMISGYIAN 245
           R++                              +A + FDE+ +R+ +SWN +IS Y   
Sbjct: 462 RQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHY 521

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
           G A+  +++F+ ML  GF  D  T ++VLS C++ G                        
Sbjct: 522 GQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNG------------------------ 557

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSW----TSMIAGYAREGVFDGAIRLFRGMV 360
                +  +C      ++ FE M  E  +  W    + +I    R G FD    +   M 
Sbjct: 558 -----LAEEC------MKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEM- 605

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSM 419
               E D    +SILH+C   G  ++ +   + +       ++ YV   L +++AK G  
Sbjct: 606 --PFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYV--ILSNIFAKAGKW 661

Query: 420 ADAESV 425
            DA  V
Sbjct: 662 EDAAGV 667



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 143/327 (43%), Gaps = 31/327 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I    + G  E+A+++     ++ +  D  T+ S ++  ++L  +  G+++HS +
Sbjct: 409 SWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYL 468

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG  +     GS L+ M+  CG L E  + F+++       WN ++  Y+  G  K +
Sbjct: 469 IRSG-HMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNA 527

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVSW----NC 237
           + +F+ M   G   DS TF   L  L+   ++   ++  K F+ +  +  +  W    +C
Sbjct: 528 IKMFEGMLCYGFKPDSVTF---LSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSC 584

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +I      G  +K  E+  EM    F  D     ++L  C   G     R V A  L + 
Sbjct: 585 VIDTLGRVGRFDKVQEMLGEM---PFEDDPIIWSSILHSCRTHGNQDLAR-VAAEKLFSM 640

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV-----VSWTSM---IAGYAREGVF 349
            S + +    L ++++K G  + A  V + M +R +      SW  +   +  ++     
Sbjct: 641 GSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQT 700

Query: 350 DGAI--------RLFRGMVREGIEPDV 368
           +  I        RL++ M ++G +PD 
Sbjct: 701 NPMITEIKDELERLYKEMDKQGYKPDT 727


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/699 (35%), Positives = 387/699 (55%), Gaps = 35/699 (5%)

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
            G+++  R  F  +       +N L+  Y +      +L LF++M S  +A    +++ +
Sbjct: 30  AGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA----SYNAL 85

Query: 205 LKCLAVVGNSRRVKDAHKLFDELS-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
           +  L++    + + DA      +     VVS+  ++ GY+ +G+    + +F++M     
Sbjct: 86  ISGLSL--RRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNH 143

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
                +   +L G  + G +   R +          +++     +L  Y + G +  A  
Sbjct: 144 ----VSYTVLLGGLLDAGRVNEARRL----FDEMPDRDVVAWTAMLSGYCQAGRITEARA 195

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           +F++M +R+VVSWT+MI+GYA+ G  + A +LF  M     E +  + T++L      G 
Sbjct: 196 LFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLVGYIQAGH 251

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
           +E   ++ + + E+ + +     NA+M  + + G +  A++VF +M  +D  +W+ MI A
Sbjct: 252 VEDAAELFNAMPEHPVAAC----NAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKA 307

Query: 444 ----------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                     L  F  ML +   P+  ++  IL  CA+LA L+ GRE+H  +LR     D
Sbjct: 308 YEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMD 367

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
               +A++ MY+KCG L  A+ +F     KD++ W  MI GY  HG G  A+  F+DMR 
Sbjct: 368 VFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRL 427

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           AG+ PD +++I  L ACS++G V EG   FN M    +I P  EHY+CMVDLL R+G + 
Sbjct: 428 AGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVE 487

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           EA+  I+ MPV PDA IWG+L+  CR+H   ++AE  A+ + ELEP N G YVLL+++Y 
Sbjct: 488 EAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYT 547

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS-SHPHAKKIESLLKRLR 731
              +WE+  K+R+ IS R L K+PGCSWIE   +V++F +G   +HP    I  +L++L 
Sbjct: 548 SVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLD 607

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
             +   GY     + L + DE +K  +L  HSE+ A+A+G+L +P G  IRV KNLRVCG
Sbjct: 608 GLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCG 667

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   K ++K   REIVLRD+NRFHHFKDG CSCR +W
Sbjct: 668 DCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 172/380 (45%), Gaps = 47/380 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICES 125
           + A +  +C+ G + +A  +    E  K +  ++ +++   A    +   +K+  ++ E 
Sbjct: 177 WTAMLSGYCQAGRITEARALF--DEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER 234

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
                + V  + ++  ++  G +++   +FN +    V   N +M  + + G    +  +
Sbjct: 235 -----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTV 289

Query: 186 FKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
           F+KM+                                      +RD  +W+ MI  Y  N
Sbjct: 290 FEKMR--------------------------------------ERDDGTWSAMIKAYEQN 311

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
               + L  F+EML  G   +  +++++L+ CA    L +GR VHA  L+  F  ++   
Sbjct: 312 EFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAV 371

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           + L+ MY KCG+LD A RVF     + +V W SMI GYA+ G+ + A+ +F  M   G+ 
Sbjct: 372 SALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAES 424
           PD       L AC+  G ++ G+++ + +  N  ++      + ++D+  + G + +A  
Sbjct: 432 PDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFD 491

Query: 425 VFNQMPVK-DIVSWNTMIGA 443
           +   MPV+ D V W  ++GA
Sbjct: 492 LIKNMPVEPDAVIWGALMGA 511



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 166/401 (41%), Gaps = 75/401 (18%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI- 364
           N  +   ++ G+++GA   FE M  R+  S+ +++AGY R  + D A+ LFR M    + 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 365 ----------------------------EPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
                                        P V + TS+L      GLL     +   + E
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 397 NDMQSSLYVSNALMDM---------------------------YAKCGSMADAESVFNQM 429
            +  S   +   L+D                            Y + G + +A ++F++M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGRE 479
           P +++VSW  MI           A  LF  M +  E   V+   +L        +E   E
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNE---VSWTAMLVGYIQAGHVEDAAE 257

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +   +  H ++A     NA++  + + G++  A+++F+ +  +D  +W+ MI  Y  + F
Sbjct: 258 LFNAMPEHPVAA----CNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEF 313

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
             +A++TF +M   G+ P+  S IS+L  C+   ++D G R  +     C+ +  +   +
Sbjct: 314 LMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYG-REVHAAMLRCSFDMDVFAVS 372

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
            ++ +  + GNL +A R         D  +W S++ G   H
Sbjct: 373 ALITMYIKCGNLDKAKRVFHTFE-PKDIVMWNSMITGYAQH 412



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 137/328 (41%), Gaps = 55/328 (16%)

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLF--------- 447
           NA +   A+ G++  A + F  MP++   S+N ++           AL LF         
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 448 --------VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD------- 492
                   +++ +   PD       +P   S+ +      + GY+ RHG+ AD       
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFT--SLLRGYV-RHGLLADAIRLFQQ 137

Query: 493 ---RNVANAIVDM--YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
              RN  +  V +   +  G +  AR LFD +P +D+++WT M++GY   G   +A A F
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALF 197

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
           ++M +  +    VS+ +++   + +G V+   + F +M     +      +  M+    +
Sbjct: 198 DEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVS-----WTAMLVGYIQ 248

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            G++ +A      MP  P A    +++ G      V  A+ V E + E    + G +  +
Sbjct: 249 AGHVEDAAELFNAMPEHPVAAC-NAMMVGFGQRGMVDAAKTVFEKMRE---RDDGTWSAM 304

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKN 695
              Y + E   E      ++  RG++ N
Sbjct: 305 IKAYEQNEFLMEALSTFREMLWRGVRPN 332


>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
 gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
          Length = 655

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/647 (34%), Positives = 369/647 (57%), Gaps = 20/647 (3%)

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
           +++  +C+++     G  + + DA   F E+++++  S+  M+  Y  N + +K L++FK
Sbjct: 16  ETFLGNCLVR---AYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFK 72

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGA--LMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
           + +N     + AT VTVL  CA+ G   L  G+ +H  A+   F  ++   N+L+ MY+K
Sbjct: 73  KSINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAK 132

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
           CG    A  VFEKM  ++++S+TSMI  Y        A  L++ M+ EGI PD+YA  + 
Sbjct: 133 CGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAA 192

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L  C     +  G+ +H  +  ++ ++ +  SNAL+ MY + G +A A+ VF+ +  KD+
Sbjct: 193 LAVCPT---IREGEAIHVKLGNHERRTPV-CSNALVGMYGRFGRIASAKWVFDGIRYKDL 248

Query: 435 VSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGY 483
            S+N MI           A+ L++ M  +N EP+  T   +L AC+ L AL  G+EIH  
Sbjct: 249 ASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKK 308

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
           +       D     A+V+MY KCG    AR++F+    K++ +WT +++ Y   G     
Sbjct: 309 VKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYR 368

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           +  +  M   G+ PD+V+F ++  ACSHSGL DEG  +F  MR +  I P   HY CM+D
Sbjct: 369 LEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMID 428

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY 663
           LL R G L EA   +  MP +PD   W  LL  C+++ ++K+  +  + + EL P ++G 
Sbjct: 429 LLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGP 488

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
           Y+L+ N+YA+A KW +V ++++ I +RGL K PG S IE + +++ FV G ++HP  ++I
Sbjct: 489 YLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEI 548

Query: 724 ESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRV 783
            + L+ +  ++   GY P T+  L++ +E  K   L  HSE++A+  G+L   AG T+ +
Sbjct: 549 RARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLHI 608

Query: 784 TKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KNLR+C DCH   K +SK   R++++RDS+RFH F+ G CSC  +W
Sbjct: 609 VKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 204/442 (46%), Gaps = 36/442 (8%)

Query: 41  KSHSSC-TINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTK 97
           +++  C +I+   A+ S+       +Y   +G + E    +KA+++   S  E+ + +  
Sbjct: 25  RAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSINEELQQNQA 84

Query: 98  TYCSILQLCADLKS--LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVF 155
           TY ++L+ CA L    LEDGK++H      G   D  V+ + L+ M+  CG  K    VF
Sbjct: 85  TYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTD-LVVQNSLIHMYAKCGSFKFAAGVF 143

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV---- 211
            K++   +  +  ++  Y+ T    E+  L+KKM S GI  D Y ++  L     +    
Sbjct: 144 EKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPTIREGE 203

Query: 212 ------------------------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
                                   G   R+  A  +FD +  +D+ S+N MI+ +     
Sbjct: 204 AIHVKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDD 263

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
             K + ++ EM       +L T  +VL  C+  GAL  G+ +H          ++++N  
Sbjct: 264 GSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTA 323

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L++MY+KCG    A  VF   G ++V +WTS+++ Y++ G     +  ++ M  EG+ PD
Sbjct: 324 LVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPD 383

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS-NALMDMYAKCGSMADAESVF 426
               T+I +AC+  GL + G      ++E+     L      ++D+  + G + +AE + 
Sbjct: 384 DVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELV 443

Query: 427 NQMPVK-DIVSWNTMIGALDLF 447
             MP   D+V+W  ++ A  ++
Sbjct: 444 RTMPYSPDVVTWTILLSACKVY 465



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 209/453 (46%), Gaps = 53/453 (11%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           LG+ LV  +  C  + +    F++I     + + ++M  Y +    K++L LFKK  +  
Sbjct: 19  LGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSINEE 78

Query: 194 IAADSYTFSCVLKCLAVVGNS--RRVKDAHK----------------------------- 222
           +  +  T+  VLK  A +G       K+ H+                             
Sbjct: 79  LQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKF 138

Query: 223 ---LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
              +F+++  ++++S+  MI  Y       +  E++K+ML+ G   D+      L   A 
Sbjct: 139 AAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAAL---AV 195

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
           C  +  G A+H   L     +    +N L+ MY + G +  A  VF+ +  + + S+ +M
Sbjct: 196 CPTIREGEAIHV-KLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNM 254

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           IA +A+      AI L+  M    +EP+++  TS+L AC+  G L  GK++H  +K  D 
Sbjct: 255 IAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQ 314

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVA 449
            + +  + AL++MYAKCGS  +A +VFN   +K++ +W +++ A          L+ +  
Sbjct: 315 PTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQR 374

Query: 450 M-LQNFEPDGVTMACILPACASLAALERGREIHGYILR--HGISADRNVANAIVDMYVKC 506
           M  +   PD VT   I  AC+     + G  ++   +R  H I   +     ++D+  + 
Sbjct: 375 MNCEGVIPDDVTFTAIFNACSHSGLPDEGL-LYFRAMREDHWIVPLQPHYTCMIDLLGRV 433

Query: 507 GVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
           G L  A  L   +P + D+++WTI+++   ++G
Sbjct: 434 GRLREAEELVRTMPYSPDVVTWTILLSACKVYG 466



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 148/295 (50%), Gaps = 23/295 (7%)

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
           KE    N L+  Y +C  +D A+  F ++ E++  S+  M+  Y    +   A++LF+  
Sbjct: 15  KETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKS 74

Query: 360 VREGIEPDVYAITSILHACACDG--LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
           + E ++ +     ++L +CA  G   LE GK++H +       + L V N+L+ MYAKCG
Sbjct: 75  INEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCG 134

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILP 466
           S   A  VF +M  K+++S+ +MI           A +L+  ML +   PD    A  L 
Sbjct: 135 SFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALA 194

Query: 467 ACASLAALERGREIHGYILRHGISADRNV---ANAIVDMYVKCGVLVLARSLFDMIPAKD 523
            C +   +  G  IH  +  H    +R     +NA+V MY + G +  A+ +FD I  KD
Sbjct: 195 VCPT---IREGEAIHVKLGNH----ERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKD 247

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           L S+  MIA +  +  G  AI+ + +M    +EP+  +F SVL ACS  G + EG
Sbjct: 248 LASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEG 302



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 141/341 (41%), Gaps = 71/341 (20%)

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNF 454
           + +   ++ N L+  Y +C S+ DA + F+++  K+  S+  M+GA    DL    LQ F
Sbjct: 12  EQEKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLF 71

Query: 455 --------EPDGVTMACILPACASLAA--LERGREIHGYILRHGISADRNVANAIVDMYV 504
                   + +  T   +L +CA L    LE G+EIH + +  G   D  V N+++ MY 
Sbjct: 72  KKSINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYA 131

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG    A  +F+ +  K+LIS+T MI  Y       +A   +  M   GI PD  ++ +
Sbjct: 132 KCGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAA 191

Query: 565 VLYACS----------------------HSGLVDEGWRF---------FNMMRYECNIEP 593
            L  C                        + LV    RF         F+ +RY+     
Sbjct: 192 ALAVCPTIREGEAIHVKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYK----- 246

Query: 594 KLEHYACMVDLLSRTGNLSEAYR-FIEMMPVAPDATIW------------GSLLCGCRIH 640
            L  Y  M+ + ++  + S+A   +IEM     +  +W            G+L  G  IH
Sbjct: 247 DLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIH 306

Query: 641 HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
            +VK  +         +P +  Y   L N+YA+     E +
Sbjct: 307 KKVKGGD---------QPTDVAYNTALVNMYAKCGSTHEAR 338



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 16/230 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           +YN  I  F +  +  KA+ +    E   ++    T+ S+L  C+ L +L +GK++H  +
Sbjct: 250 SYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKV 309

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G    D    + LV M+  CG   E R VFN      VF W  LM  YS+ G  +  
Sbjct: 310 -KGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYR 368

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD------VVSWN 236
           L  +++M   G+  D  TF+ +    +  G    + D   L+      D         + 
Sbjct: 369 LEAYQRMNCEGVIPDDVTFTAIFNACSHSG----LPDEGLLYFRAMREDHWIVPLQPHYT 424

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           CMI      G   +  E+ + M    ++ D+ T   +LS C   G L  G
Sbjct: 425 CMIDLLGRVGRLREAEELVRTM---PYSPDVVTWTILLSACKVYGDLKIG 471


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/558 (40%), Positives = 317/558 (56%), Gaps = 46/558 (8%)

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G L  A  VF ++   +  +  S+I GY  + +   AI  ++ M+ +G++PD +   S+ 
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            +C   G+L  GK +H +  +    S  Y+ N LM+MY+ CG +  A  VF++M  K +V
Sbjct: 86  KSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 142

Query: 436 SWNTMIGA------------------------------------------LDLFVAM-LQ 452
           SW TMIGA                                          L LF  M L 
Sbjct: 143 SWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 202

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
             + D VTMA +L AC  L ALE G+ +H YI +  I  D  +  A+VDMY KCG +  A
Sbjct: 203 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 262

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +F  +P KD+++WT +I G  M G G  A+  F++M+ + ++PD ++F+ VL ACSH+
Sbjct: 263 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHA 322

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           GLV+EG  +FN M  +  I+P +EHY CMVD+L R G ++EA   I+ MP+APD  +   
Sbjct: 323 GLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVG 382

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           LL  CRIH  + +AE+ A+ + EL+P N G YVLL+N+Y+  + WE  KK+RE +  R +
Sbjct: 383 LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 442

Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 752
           KK PGCS IE+ G V+ FV G  SHP + +I   L  +   +K  GY P     L + DE
Sbjct: 443 KKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDE 502

Query: 753 MEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRD 812
            EKE  L  HSEKLA+AFG+L+   G  IRV KNLRVC DCH   KF+S+   REI++RD
Sbjct: 503 KEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRD 562

Query: 813 SNRFHHFKDGRCSCRGFW 830
            NRFHHF  G CSCR FW
Sbjct: 563 RNRFHHFTKGSCSCRDFW 580



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 172/364 (47%), Gaps = 48/364 (13%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +F+++ +    + N +I GY    +  + +  ++ M+  G + D  T  ++     +
Sbjct: 31  ARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFK---S 87

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
           CG L  G+ +H  + K  F+ +    NTL++MYS CG L  A +VF+KM  +SVVSW +M
Sbjct: 88  CGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATM 147

Query: 340 IAGYAREGVFDGAIRLFR--------------------------------GMVREGIEPD 367
           I  YA+  +   AI+LFR                                 M   G++ D
Sbjct: 148 IGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGD 207

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
              + S+L AC   G LE+GK +H YI++  ++  + +  AL+DMYAKCGS+  A  VF 
Sbjct: 208 KVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQ 267

Query: 428 QMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALER 476
           +MP KD+++W  +I           AL+LF  M +   +PD +T   +L AC+    +  
Sbjct: 268 EMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNE 327

Query: 477 GREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGY 534
           G      +  ++GI         +VDM  + G +  A  L   +P A D      +++  
Sbjct: 328 GIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSAC 387

Query: 535 GMHG 538
            +HG
Sbjct: 388 RIHG 391



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 161/338 (47%), Gaps = 42/338 (12%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+ S+ + C     L +GK++H    + G    D  + + L+ M+  CG L   R+V
Sbjct: 77  DRFTFPSLFKSCG---VLCEGKQLHCHSTKLGFA-SDAYIQNTLMNMYSNCGCLVSARKV 132

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+K+ N  V  W  ++  Y++     E++ LF                            
Sbjct: 133 FDKMVNKSVVSWATMIGAYAQWDLPHEAIKLF---------------------------- 164

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           RR++ A  LF          WN MI+G++ +   E+ L +F EM   G   D  TM ++L
Sbjct: 165 RRMEIASNLF---------CWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLL 215

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             C + GAL  G+ +H +  K     +++    L+DMY+KCG ++ A+RVF++M E+ V+
Sbjct: 216 IACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVM 275

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           +WT++I G A  G    A+ LF  M    ++PD      +L AC+  GL+  G    + +
Sbjct: 276 TWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSM 335

Query: 395 KEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
                +Q S+     ++DM  + G +A+AE +   MP+
Sbjct: 336 PNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPM 373



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 124/286 (43%), Gaps = 19/286 (6%)

Query: 55  ISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSL 112
           I+  L C    +N  I    E  + E+A+ +    + S +  D  T  S+L  C  L +L
Sbjct: 169 IASNLFC----WNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGAL 224

Query: 113 EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHE 172
           E GK +H  I +  I +D   LG+ LV M+  CG ++   RVF ++    V  W  L+  
Sbjct: 225 ELGKWLHVYIEKEKIEVDVA-LGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVG 283

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-- 230
            +  G   ++L LF +MQ   +  D+ TF  V   LA   ++  V +    F+ + ++  
Sbjct: 284 LAMCGQGLKALELFHEMQMSEVKPDAITFVGV---LAACSHAGLVNEGIAYFNSMPNKYG 340

Query: 231 ---DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
               +  + CM+      G A +  E    + N+    D   +V +LS C   G L+   
Sbjct: 341 IQPSIEHYGCMVDML---GRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAE 397

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
              A  L     K       L ++YS   + + A ++ E M ER++
Sbjct: 398 RA-AQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 442


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 266/813 (32%), Positives = 410/813 (50%), Gaps = 56/813 (6%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSK--IDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I  F  +G++  +   ++ +  S   +++  Y  ++Q       L  GK VHS + ++  
Sbjct: 31  IESFATLGSVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSF 90

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
                 L + L+ M+  CGD +   ++F+K+    +  +N L+  Y +  N  + + LF 
Sbjct: 91  R-PCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFD 149

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSR-------------------------------- 215
           K + LG+  D YT +  L   +  GN                                  
Sbjct: 150 KARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCG 209

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           +V  A  LFD     D VSWN +I+GY+ NG  E+ L + ++M   G   +  T+ + L 
Sbjct: 210 QVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALK 269

Query: 276 GCANC--GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
            C++   G  MFG  +H  A+K     ++     LLDMY+K G LD AI++F++M +++V
Sbjct: 270 ACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNV 329

Query: 334 VSWTSMIAGYAREGVFDG-----AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
           V + +M+AG  ++   +      A+ LF  M   GI+P ++  +S+L AC      +  K
Sbjct: 330 VMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAK 389

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------- 441
            VH  + +N + S  Y+ + L+D+Y+  GSM DA   FN +    IV    MI       
Sbjct: 390 QVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNG 449

Query: 442 ---GALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
               AL LF  +L   E PD    + I+ +CA++  L  G +I G+  + GIS      N
Sbjct: 450 EFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQN 509

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           + + MY K G L  A   F  +   D++SW+ MI     HG   +A+  F  M+  GIEP
Sbjct: 510 SQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEP 569

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           +  +F+ VL ACSH GLV+EG R+F+ M  +  ++  ++H  C+VDLL R G L++A   
Sbjct: 570 NHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESL 629

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           I  +    +  +W +LL  CRIH +   A++VA+ V ELEP  +  YVLL N+Y +A   
Sbjct: 630 ILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNK 689

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
               K+R  +  R +KK PG SWI+I  KV  FV+G  SH ++ +I + L  +    KR 
Sbjct: 690 LAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKR- 748

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
                 +  L    E E    +  HSEKLA+AFG+L L     +RV KNLR+C DCH   
Sbjct: 749 --LDSAKDILGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTM 806

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K  S   +RE+++RDS RFHHFKDG CSC  +W
Sbjct: 807 KLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 839


>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/539 (40%), Positives = 325/539 (60%), Gaps = 17/539 (3%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N L+    K GDL  A  +F+KM  R+V +W +M+AG    G+ + +++ F  M REG+ 
Sbjct: 112 NILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMH 171

Query: 366 PDVYAITSILHACACDGLLEI--GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           PD + + S+   CA  GLL++  G+ VH Y+  + M S + V N+L  MY +CG +A+ E
Sbjct: 172 PDEFGLGSVFRCCA--GLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGE 229

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFE--PDGVTMACILPACASL 471
           +V   +P   IVS+NT I          GAL+ F +M++  E  PD VT    +  C+ L
Sbjct: 230 AVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYF-SMMRGVEVAPDVVTFVSAISCCSDL 288

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           AAL +G+++H  +++ G+     V  ++V MY +CG L  +  ++D     DL   + MI
Sbjct: 289 AALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMI 348

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           +  G HG G  A+  F  M   G EP+EV+F+++LYACSHSGL DEG  FF +M      
Sbjct: 349 SACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGF 408

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
           +P ++HY C+VDLL R+G L EA   I  MPV  D  IW +LL  C+      +AE++AE
Sbjct: 409 QPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAE 468

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            V E +P ++  YVLL+N+ A +++W +V ++R+ +  + ++K PG SW+E KG+V+ F 
Sbjct: 469 RVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFC 528

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFG 771
            G  SHP   +I+  LK +  ++++ GY P       + ++ EKEV+L  HSEKLA+AF 
Sbjct: 529 TGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFA 588

Query: 772 ILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            LNLP G  IRV KNLRVC DCH   K +S+   REIV+RD +RFHHF+DGRCSC  +W
Sbjct: 589 FLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 207/482 (42%), Gaps = 66/482 (13%)

Query: 69  EIGRFCEVGNLEKAME-----VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           E  R C  G L+ A+      VL+S      D   +  I + C  +  L   +++H+   
Sbjct: 19  EFIRLCSSGRLKDALHHPFRGVLWS------DASLFSHIFRACRAIPLL---RQLHAFAA 69

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            SG   D     + L+  +   GDL   R +F  I    V  WN+L+    K G+     
Sbjct: 70  TSGAAADR-FTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGD----- 123

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                      +G++R      +LFD++  R+V +WN M++G  
Sbjct: 124 ---------------------------LGSAR------ELFDKMPTRNVATWNAMVAGLT 150

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
             G+ E  L+ F  M   G + D   + +V   CA    ++ GR VHA+ +++    ++ 
Sbjct: 151 NVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMC 210

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N+L  MY +CG L     V   +   ++VS+ + IAG  + G  +GA+  F  M    
Sbjct: 211 VGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVE 270

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           + PDV    S +  C+    L  G+ VH  + +  +   + V  +L+ MY++CG + D+E
Sbjct: 271 VAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSE 330

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLA 472
            V++     D+   + MI           A++LF  M+    EP+ VT   +L AC+   
Sbjct: 331 RVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSG 390

Query: 473 ALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIM 530
             + G E    + + +G        N IVD+  + G L  A +L   +P + D + W  +
Sbjct: 391 LKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTL 450

Query: 531 IA 532
           ++
Sbjct: 451 LS 452



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 183/410 (44%), Gaps = 39/410 (9%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           + I R C    L + +    ++  +  D  T  ++L   ADL  L   + +   I +  +
Sbjct: 49  SHIFRACRAIPLLRQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRNV 108

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
           +  + ++G       +  GDL   R +F+K+    V  WN ++   +  G  ++SL  F 
Sbjct: 109 MSWNILIGG-----CIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFL 163

Query: 188 KMQSLGIAADSYTFSCVLKCLA------------------------VVGNSRR------- 216
            M+  G+  D +    V +C A                         VGNS         
Sbjct: 164 AMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCG 223

Query: 217 -VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
            + +   +   L    +VS+N  I+G   NG +E  LE F  M  +    D+ T V+ +S
Sbjct: 224 CLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAIS 283

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C++  AL  G+ VHA  +KA   K +    +L+ MYS+CG L  + RV++      +  
Sbjct: 284 CCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFL 343

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI- 394
            ++MI+     G    A+ LF+ M+  G EP+     ++L+AC+  GL + G +  + + 
Sbjct: 344 LSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMT 403

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           K    Q S+   N ++D+  + G + +AE++   MPV+ D V W T++ A
Sbjct: 404 KTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSA 453



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 139/327 (42%), Gaps = 37/327 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSII 122
            +NA +     VG  E +++   +  +  +    +   S+ + CA L  +  G++VH+ +
Sbjct: 141 TWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYV 200

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG+   D  +G+ L  M++ CG L EG  V   + +  +  +N  +   ++ G+ + +
Sbjct: 201 VRSGM-DSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGA 259

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRRVK--------------------- 218
           L  F  M+ + +A D  TF   + C   LA +   ++V                      
Sbjct: 260 LEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHM 319

Query: 219 --------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                   D+ +++D     D+   + MIS    +G   K +E+FK+M+N G   +  T 
Sbjct: 320 YSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTF 379

Query: 271 VTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           + +L  C++ G    G        K   F   +   N ++D+  + G LD A  +   M 
Sbjct: 380 LALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMP 439

Query: 330 ERS-VVSWTSMIAGYAREGVFDGAIRL 355
            R+  V W ++++    +  FD A R+
Sbjct: 440 VRADGVIWKTLLSACKTQKNFDMAERI 466


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 261/788 (33%), Positives = 413/788 (52%), Gaps = 52/788 (6%)

Query: 77  GNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G +E+A+       K  +  +     +++ LC  L+    G +V + +  SG++    V 
Sbjct: 124 GCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVA 183

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ---- 190
            S L+ MF     +++  R+F++++      WN ++  YS    + +   +   M+    
Sbjct: 184 NS-LITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEV 242

Query: 191 --------------------SLGIAADSYTFSCVLKCLAVVGNSR--------RVKDAHK 222
                               +LG    S   S  L C   + N+         ++ +A  
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCG 281
           LF  +S RDV+SWN MIS Y+ +    + LE   ++L       +  T  + L  C++  
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
           ALM GR +HA  L+      +   N+LL MYSKC  ++   RVFE M    VVS   +  
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG-LLEIGKDVHDYIKENDMQ 400
           GYA       A+R+F  M   GI+P+   + ++   C   G L   G  +H Y+ +  + 
Sbjct: 423 GYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFV-A 449
           S  Y++N+L+ MYA CG +  +  +F+++  K ++SWN +I A          + LF+ +
Sbjct: 483 SDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDS 542

Query: 450 MLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
                + D   +A  L + A+LA+LE G ++HG  +++G+  D +V NA +DMY KCG +
Sbjct: 543 QHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKM 602

Query: 510 -VLARSLFDMIPA-KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
             + ++L D  PA +    W  +I+GY  +G+  +A  TF  M   G +PD V+F+++L 
Sbjct: 603 DCMLKTLPD--PAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLS 660

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSH+GL+D+G  ++N M     + P ++H  C+VDLL R G  +EA +FI+ MPV P+ 
Sbjct: 661 ACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPND 720

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            IW SLL   R H  + +  K A+++ EL+P +   YVLL+N+YA   +W +V KLR  +
Sbjct: 721 LIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHM 780

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
               L K P CSW+++K +V+ F  G  SH HA+KI   L  + L+++  GY   T  AL
Sbjct: 781 KTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSAL 840

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
            + DE +KE  L  HSEKLA+A+G+L +P G TIR+ KNLRVC DCH + K +S    RE
Sbjct: 841 HDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHRE 900

Query: 808 IVLRDSNR 815
           IVLRD  R
Sbjct: 901 IVLRDPYR 908



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 193/378 (51%), Gaps = 12/378 (3%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           L + G+   V +A +LF E+  R+VVSW  ++    +NG  E+ L  ++ M   G   + 
Sbjct: 86  LHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNA 145

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
             + TV+S C      + G  V A  + +     +S  N+L+ M+     +  A R+F++
Sbjct: 146 NALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDR 205

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M ER  +SW +MI+ Y+ E V+     +   M    ++PDV  + S++  CA   L+ +G
Sbjct: 206 MEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALG 265

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
             +H     + +  S+ + NAL++MY+  G + +AES+F  M  +D++SWNTMI      
Sbjct: 266 SGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQS 325

Query: 443 -----ALDLFVAMLQNFE--PDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                AL+    +LQ  E  P+ +T +  L AC+S  AL  GR IH  IL+  +     +
Sbjct: 326 NSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLI 385

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            N+++ MY KC  +     +F+ +P  D++S  ++  GY       +A+  F+ MR  GI
Sbjct: 386 GNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGI 445

Query: 556 EPDEVSFISVLYACSHSG 573
           +P+ ++ I++   C   G
Sbjct: 446 KPNYITMINLQGTCKSLG 463



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 190/414 (45%), Gaps = 22/414 (5%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG---AL 283
           +  R   SW   +SG    G+      + + M      +    + ++++ C + G     
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G A+HA   +A     +     LL +Y   G +  A R+F +M +R+VVSWT+++   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE---IGKDVHDYIKENDMQ 400
           +  G  + A+  +R M +EG+  +  A+ +++  C   G LE    G  V  ++  + + 
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLC---GALEDEVAGLQVTAHVVVSGLL 177

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD-------LFVAMLQ- 452
           + + V+N+L+ M+     + DAE +F++M  +D +SWN MI            F+ +   
Sbjct: 178 THVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM 237

Query: 453 ---NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
                +PD  T+  ++  CAS   +  G  IH   +  G+     + NA+V+MY   G L
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI-EPDEVSFISVLYA 568
             A SLF  +  +D+ISW  MI+ Y       +A+ T   + Q     P+ ++F S L A
Sbjct: 298 DEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGA 357

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           CS    +  G R  + M  + +++  L     ++ + S+  ++ +  R  E MP
Sbjct: 358 CSSPEALMNG-RTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMP 410


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/662 (36%), Positives = 355/662 (53%), Gaps = 46/662 (6%)

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA-TMVTV 273
           RR  DA  +FDE   R    W   ISG    G    G+  F EML  G     A  +  V
Sbjct: 59  RRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAV 118

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           +  CA  G +  G+ VH + L+     ++   N +LDMY+KCG  + A RVF  M ER  
Sbjct: 119 VRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDA 178

Query: 334 V-------------------------------SWTSMIAGYAREGVFDGAIRLFRGMVRE 362
           V                               SW ++I+G  R G    A+   R M + 
Sbjct: 179 VSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQA 238

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G+  + Y  ++         L ++G+ +H  +    ++   +V ++LMDMY KCG +  A
Sbjct: 239 GVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAA 298

Query: 423 ESVFNQMP--VKDI-VSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPAC 468
            SVF+      +D+  +W+TM+           ALDLF  ML +    D  T+  +  AC
Sbjct: 299 ASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAAC 358

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A++  +E+GR++HG + +     D  +A+AIVDMY KCG L  ARS+FD    K++  WT
Sbjct: 359 ANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWT 418

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            M+  Y  HG G  AI  F  M    + P+E++ + VL ACSH GLV EG  +F  M+ E
Sbjct: 419 SMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEE 478

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             I P +EHY C+VDL  R+G L +A  FIE   +  +A +W +LL  CR+H   + A+ 
Sbjct: 479 YGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKL 538

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            +E + +LE  + G YV+L+N+YA   KW +  +LR  +  R ++K PG SWI +K  V+
Sbjct: 539 ASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVH 598

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            FVAG +SHP + +I + L++L   +K  GY  +T   + + ++ ++E AL  HSEKLA+
Sbjct: 599 TFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAI 658

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           AFGI++ P+G  +R+ KNLRVC DCHE  K++S    REIV+RD  RFHHFKD  CSC  
Sbjct: 659 AFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCED 718

Query: 829 FW 830
           FW
Sbjct: 719 FW 720



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 192/414 (46%), Gaps = 69/414 (16%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK--- 157
           ++++ CA +  +E GK+VH  +  +G+ +D  VL + ++ M+  CG  +  RRVF     
Sbjct: 117 AVVRCCAGMGDVESGKRVHGWMLRNGVHLDV-VLCNAVLDMYAKCGQFERARRVFGAMAE 175

Query: 158 -------------IDNGKVF---------------IWNLLMHEYSKTGNFKESLYLFKKM 189
                        I +G +                 WN ++    ++G+  ++L   ++M
Sbjct: 176 RDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRM 235

Query: 190 QSLGIAADSYTFSC--VLKCLAVVGNSRR------------------------------V 217
              G+  + YT+S   VL  + ++ +  R                              +
Sbjct: 236 AQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLL 295

Query: 218 KDAHKLFDELS--DRDV-VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           + A  +FD  S   RD+  +W+ M++GY+ NG  E+ L++F+ ML  G   D  T+ +V 
Sbjct: 296 EAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVA 355

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           + CAN G +  GR VH    K  +  +    + ++DMY+KCG+L+ A  +F++   +++ 
Sbjct: 356 AACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIA 415

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
            WTSM+  YA  G    AI LF  M  E + P+   +  +L AC+  GL+  G+     +
Sbjct: 416 VWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQM 475

Query: 395 KEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
           +E   +  S+   N ++D+Y + G +  A++   +  +  + + W T++ A  L
Sbjct: 476 QEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRL 529



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 133/323 (41%), Gaps = 48/323 (14%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
           T ++N  I      G+   A+  L    ++ +  +  TY +   L   L   + G+++H 
Sbjct: 209 TTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHG 268

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK---IDNGKVFIWNLLMHEYSKTG 177
            +  + +   D  + S L+ M+  CG L+    VF+    +     F W+ ++  Y + G
Sbjct: 269 RVLIAALE-GDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNG 327

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG---NSRRV----------------- 217
             +E+L LF++M   G+AAD +T + V    A VG     R+V                 
Sbjct: 328 REEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLAS 387

Query: 218 ------------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                       +DA  +FD    +++  W  M+  Y ++G     +E+F+ M       
Sbjct: 388 AIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTP 447

Query: 266 DLATMVTVLSGCANC-----GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
           +  T+V VLS C++      G L F +    + +       I   N ++D+Y + G LD 
Sbjct: 448 NEITLVGVLSACSHVGLVSEGELYFKQMQEEYGI----VPSIEHYNCIVDLYGRSGLLDK 503

Query: 321 AIRVFEKMG-ERSVVSWTSMIAG 342
           A    E+       + W ++++ 
Sbjct: 504 AKNFIEENNINHEAIVWKTLLSA 526



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 100/219 (45%), Gaps = 14/219 (6%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           ++  +  + + G  E+A+++      E    D  T  S+   CA++  +E G++VH  + 
Sbjct: 316 WSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCV- 374

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           E      D  L S +V M+  CG+L++ R +F++     + +W  ++  Y+  G  + ++
Sbjct: 375 EKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAI 434

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSWNCM 238
            LF++M +  +  +  T   VL   + VG    V +    F ++ +       +  +NC+
Sbjct: 435 ELFERMTAEKMTPNEITLVGVLSACSHVG---LVSEGELYFKQMQEEYGIVPSIEHYNCI 491

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           +  Y  +G+ +K     +E      N +     T+LS C
Sbjct: 492 VDLYGRSGLLDKAKNFIEEN---NINHEAIVWKTLLSAC 527



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 5/170 (2%)

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           S A L RGR   G  L   ++   +   +++  +V+      AR +FD  P +    WT+
Sbjct: 22  SAALLLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTL 81

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRY 587
            I+G    G   D +  F +M   G   P+     +V+  C+  G V+ G R    M+R 
Sbjct: 82  TISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRN 141

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
             +++  L +   ++D+ ++ G    A R    M    DA  W   +  C
Sbjct: 142 GVHLDVVLCN--AVLDMYAKCGQFERARRVFGAM-AERDAVSWNIAIGAC 188


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/607 (37%), Positives = 351/607 (57%), Gaps = 16/607 (2%)

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           WN ++S +   G     L VF+ + +     +  T    L+ CA  G L    +V   A 
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALPS-SARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
            A +  ++   + LL +YS+CG ++ AIRVF+ M  +  V+W++M+AG+   G    A+ 
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           ++  M   G+  D   +  ++ AC   G   IG  VH  +  + M+  +  + +L+ MYA
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMAC 463
           K G +  A  VF  MP ++ V+W+ +I           ALDLF  +  +  +P    +  
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
            L ACAS+  L+ G+ IHG+ILR  +     +  A++DMY KCG L  AR LF+ + ++D
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRD 373

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           L+ W  +IA  G HG G DA+A F ++ + GI+PD  +F S+L A SHSGLV+EG  +F+
Sbjct: 374 LVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 433

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
            M  E  IEP  +HY C+VDLL+R+G + EA   +  M   P   IW  LL GC  + ++
Sbjct: 434 RMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKL 493

Query: 644 KLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
           +L E +A+ + EL P++ G   L++N+YA A+KW++V+++R+ +   G KK PG S IE+
Sbjct: 494 ELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEV 553

Query: 704 KGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHS 763
           KG  + FV    SHP  ++I  ++ +L  EM++ GY P+T +   + DE   +  L  HS
Sbjct: 554 KGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDE---DQLLSYHS 610

Query: 764 EKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGR 823
           E+LA+AFG+LN   G  + + KNLRVCGDCH+  K++SK   REIV+RD+ RFHHFKDG 
Sbjct: 611 ERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGA 670

Query: 824 CSCRGFW 830
           CSC  +W
Sbjct: 671 CSCGDYW 677



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 205/413 (49%), Gaps = 47/413 (11%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----SRRVK-- 218
           WN L+  +S+ G    +L +F+ + S     +S TF+  L   A +G+     S RV+  
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALPS-SARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 219 -------------------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
                                    +A ++FD +  +D V+W+ M++G++  G   + L 
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           ++  M   G + D   MV V+  C + G    G +VH   L+ C   ++    +L+ MY+
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
           K G LD A +VF  M  R+ V+W+++I+G+A+ G    A+ LFR +  +G++P  +A+ S
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD 433
            L ACA  G L++GK +H +I    ++    +  A++DMY+KCGS+  A  +FN++  +D
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRD 373

Query: 434 IVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHG 482
           +V WN +I           AL LF  + +   +PD  T A +L A +    +E G+    
Sbjct: 374 LVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 433

Query: 483 YILRH-GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAG 533
            +++  GI         IVD+  + G++  A  +   +  +  I+ W I+++G
Sbjct: 434 RMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSG 486



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 184/405 (45%), Gaps = 36/405 (8%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKS-KIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           +N  +      G    A+ V  +   S + ++ T+   L  CA L  L+  + V      
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAFA 135

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
           +G    D  + S L+ ++  CG ++E  RVF+ +       W+ ++  +   G   E+L 
Sbjct: 136 AGYG-HDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSR---------------------------RV 217
           ++ +M+  G++ D      V++     GN+R                             
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 218 KDAH-----KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
           K+ H     ++F  +  R+ V+W+ +ISG+  NG A + L++F+E+   G       +V+
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
            L  CA+ G L  G+++H F L+     +      +LDMYSKCG L+ A ++F K+  R 
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRD 373

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           +V W ++IA     G    A+ LF+ +   GI+PD     S+L A +  GL+E GK   D
Sbjct: 374 LVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 433

Query: 393 -YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
             IKE  ++ +      ++D+ A+ G + +A  +   M  +  ++
Sbjct: 434 RMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIA 478



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 14/250 (5%)

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVF--NQMPVKDIVSWNTMI----------GALDL 446
           + SS ++ ++L   YA+ G++  AES    +      I +WN ++           AL +
Sbjct: 36  VSSSQHILSSLAAAYARAGALDAAESTLAASPSSPSSIAAWNGLLSAHSRAGAPGAALRV 95

Query: 447 FVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
           F A+  +  P+  T    L ACA L  L+    +       G   D  V +A++ +Y +C
Sbjct: 96  FRALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRC 155

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G +  A  +FD +P KD ++W+ M+AG+   G   +A+A ++ MR+ G+  DEV  + V+
Sbjct: 156 GAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVI 215

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            AC  +G    G      +   C +   +     +V + ++ G+L  A +   MMP   D
Sbjct: 216 QACMSTGNARIGASVHGRLLRHC-MRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRND 274

Query: 627 ATIWGSLLCG 636
            T W +L+ G
Sbjct: 275 VT-WSALISG 283



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 15/232 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSII 122
            ++A I  F + G   +A+++    +   +   ++   S L  CA +  L+ GK +H  I
Sbjct: 276 TWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFI 335

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
                +    +LG+ ++ M+  CG L+  R++FNK+ +  + +WN ++      G   ++
Sbjct: 336 LRR--LEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDA 393

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNC 237
           L LF+++   GI  D  TF+ +L  L+   +S  V++    FD +     +      + C
Sbjct: 394 LALFQELNETGIKPDHATFASLLSALS---HSGLVEEGKFWFDRMIKEFGIEPAEKHYVC 450

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           ++     +G+ E+  ++   M        +A  V +LSGC N   L  G  +
Sbjct: 451 IVDLLARSGLVEEANDMLASMQT---EPTIAIWVILLSGCLNNKKLELGETI 499


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/739 (33%), Positives = 394/739 (53%), Gaps = 58/739 (7%)

Query: 66  YNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA +  +   G  E+AM ++     E  + +++T  ++L  C     L  G+ VH    
Sbjct: 122 WNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCL 181

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            +G+   +  + + L+  ++   D++    +F+ +    +  WN ++  Y   G++ ++L
Sbjct: 182 RNGMFDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKAL 240

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAV--------------------------------- 210
            LF +M       D   F CV   +AV                                 
Sbjct: 241 ELFVQM-----LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNA 295

Query: 211 ----VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                 N+  ++ +H+LF+ + +RD   WN MIS Y A G  E+ +++F  M + G   D
Sbjct: 296 LLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKD 355

Query: 267 LATMVTVLSGCANCGA-LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
             T+V +LS C    + L+ G+++HA  +K+    + S  N LL MY++   ++   ++F
Sbjct: 356 ERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIF 415

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++M    ++SW +MI   AR  +   A  LF  M    I+P+ Y I SIL AC     L+
Sbjct: 416 DRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLD 475

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
            G+ +H Y+ ++ ++ +  +  AL DMY  CG  A A  +F   P +D++SWN MI    
Sbjct: 476 FGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYV 535

Query: 443 -------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA--DR 493
                  AL LF  M+   EP+ VT+  +L +   LA L +G+ +H Y+ R G S   D 
Sbjct: 536 KNNQAHKALLLFHRMISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDL 595

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
           ++ANA + MY +CG L  A ++F  +P +++ISW  MIAGYGM+G G DA+  F+ M + 
Sbjct: 596 SLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLED 655

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G  P+ V+F+SVL ACSHSG ++ G + F+ M  + N+ P+L HY+C+VDLL+R G + E
Sbjct: 656 GFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDE 715

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A  FI+ MP+ PDA++W +LL  CR + + K A+ + E + +LEP N G YVLL+NVYA 
Sbjct: 716 AREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYAT 775

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
           A  W EV+++R  +  +GL+K PG SWI +K +V+ F AG  SHP + KI + L  L   
Sbjct: 776 AGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSS 835

Query: 734 MKREGYFPKTRYALINADE 752
           M+  GY P  R+     D+
Sbjct: 836 MRETGYDPDLRWVFHEEDD 854



 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 182/637 (28%), Positives = 314/637 (49%), Gaps = 52/637 (8%)

Query: 48  INPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQL 105
           +  ++ S +K  +   K++N+ I     + N +  +      E   +  +  T   +L+ 
Sbjct: 3   LQRLTLSPTKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKA 62

Query: 106 CADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI 165
           CA   ++E GK +H  I +   ++DD  +G+ +V  +  CG +++ R VF+ + +  V +
Sbjct: 63  CAAQNAVERGKSIHRSI-QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVL 121

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-----------------KCL 208
           WN +++ Y   G ++E++ L ++M    +  +S T   +L                  CL
Sbjct: 122 WNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCL 181

Query: 209 -------------AVVGNSRR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
                        A++G   R  ++    LFD +  R++VSWN MISGY   G   K LE
Sbjct: 182 RNGMFDSNPHVATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALE 241

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           +F +ML      D  TM+  +  CA  G+L  G+ +H  A+K  F +++   N LL+MYS
Sbjct: 242 LFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYS 301

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
             G L+ + ++FE +  R    W SMI+ YA  G  + A+ LF  M  EG++ D   +  
Sbjct: 302 NNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVI 361

Query: 374 ILHACA--CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
           +L  C     GLL+ GK +H ++ ++ M+    + NAL+ MY +   +   + +F++M  
Sbjct: 362 MLSMCEELASGLLK-GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKG 420

Query: 432 KDIVSWNTMIGAL----------DLFVAMLQN-FEPDGVTMACILPACASLAALERGREI 480
            DI+SWNTMI AL          +LF  M ++  +P+  T+  IL AC  +  L+ GR I
Sbjct: 421 VDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSI 480

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           HGY+++H I  ++ +  A+ DMY+ CG    AR LF+  P +DLISW  MIA Y  +   
Sbjct: 481 HGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQA 540

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPKLEHYA 599
             A+  F+ M     EP+ V+ I+VL + +H   + +G      + R   ++   L    
Sbjct: 541 HKALLLFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLAN 599

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
             + + +R G+L  A    + +P   +   W +++ G
Sbjct: 600 AFITMYARCGSLQSAENIFKTLP-KRNIISWNAMIAG 635



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 249/518 (48%), Gaps = 52/518 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + +VG+  KA+E+      ++ K D  T    +Q CA+L SL+ GK++H + 
Sbjct: 222 SWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLA 281

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +   V D  +L + L+ M+   G L+   ++F  + N    +WN ++  Y+  G  +E+
Sbjct: 282 IKFEFVEDLYILNA-LLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEA 340

Query: 183 LYLFKKMQSLGIAADSYTFSCVL-------------------------KCLAVVGNSRR- 216
           + LF +MQS G+  D  T   +L                         +  A +GN+   
Sbjct: 341 MDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLS 400

Query: 217 -------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                  V+   K+FD +   D++SWN MI     N +  +  E+F+ M       +  T
Sbjct: 401 MYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYT 460

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           ++++L+ C +   L FGR++H + +K            L DMY  CGD   A  +FE   
Sbjct: 461 IISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCP 520

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           +R ++SW +MIA Y +      A+ LF  M+ E  EP+   I ++L +      L  G+ 
Sbjct: 521 DRDLISWNAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQS 579

Query: 390 VHDYIKEN--DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
           +H Y+      +   L ++NA + MYA+CGS+  AE++F  +P ++I+SWN MI      
Sbjct: 580 LHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMN 639

Query: 443 -----ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI-HGYILRHGISADRNV 495
                A+  F  ML++ F P+GVT   +L AC+    +E G ++ H  +    ++ +   
Sbjct: 640 GRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVH 699

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIA 532
            + IVD+  + G +  AR   D +P + D   W  +++
Sbjct: 700 YSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLS 737



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/577 (25%), Positives = 263/577 (45%), Gaps = 58/577 (10%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR--------- 216
           WN ++   +   N +  L  + +M+SLG+  ++ T   VLK  A      R         
Sbjct: 21  WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80

Query: 217 -----------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
                                  V+DA  +FD +SDRDVV WN M+ GY+  G  E+ + 
Sbjct: 81  GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 140

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK-ACFSKEISFNNTLLDMY 312
           + +EM       +  TMV +L  C     L  GR VH + L+   F         L+  Y
Sbjct: 141 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 200

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
            +  D+     +F+ M  R++VSW +MI+GY   G +  A+ LF  M+ + ++ D   + 
Sbjct: 201 LRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTML 259

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
             + ACA  G L++GK +H    + +    LY+ NAL++MY+  GS+  +  +F  +P +
Sbjct: 260 VAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR 319

Query: 433 DIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAA-LERGREI 480
           D   WN+MI           A+DLF+ M  +  + D  T+  +L  C  LA+ L +G+ +
Sbjct: 320 DAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSL 379

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           H ++++ G+  D ++ NA++ MY +   +   + +FD +   D+ISW  MI     +   
Sbjct: 380 HAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLR 439

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPKLEHYA 599
             A   F  MR++ I+P+  + IS+L AC     +D G      +M++   I   L    
Sbjct: 440 AQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLR--T 497

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC----RIHHEVKLAEKVAEHVFE 655
            + D+    G+ + A    E  P   D   W +++       + H  + L  ++   + E
Sbjct: 498 ALADMYMNCGDEATARDLFEGCP-DRDLISWNAMIASYVKNNQAHKALLLFHRM---ISE 553

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
            EP++     +L++ +       + + L   ++RRG 
Sbjct: 554 AEPNSVTIINVLSS-FTHLATLPQGQSLHAYVTRRGF 589



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/220 (19%), Positives = 92/220 (41%), Gaps = 13/220 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS-EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           ++NA I  + +     KA+ + +    +++ ++ T  ++L     L +L  G+ +H+ + 
Sbjct: 526 SWNAMIASYVKNNQAHKALLLFHRMISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVT 585

Query: 124 ESGIVID-DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             G  +  D  L +  + M+  CG L+    +F  +    +  WN ++  Y   G   ++
Sbjct: 586 RRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDA 645

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-----RDVVSWNC 237
           +  F +M   G   +  TF  V   L+   +S  ++   +LF  +        ++V ++C
Sbjct: 646 MLAFSQMLEDGFRPNGVTFVSV---LSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSC 702

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           ++      G  ++  E    M       D +    +LS C
Sbjct: 703 IVDLLARGGCIDEAREFIDSM---PIEPDASVWRALLSSC 739


>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
          Length = 648

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/636 (36%), Positives = 362/636 (56%), Gaps = 27/636 (4%)

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANC 280
           ++F  + DR+VVSW  ++ G++ +G A   L +  EM        +  T+   L  C   
Sbjct: 13  EVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVV 72

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS-VVSWTSM 339
           G    G  +H   ++A + +     ++L+ +YSK G +  A RVF+  G  S + +W +M
Sbjct: 73  GDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAM 132

Query: 340 IAGYAREGVFDGAIRLFRGMVR-EGI-EPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           ++GYA  G    A+ +FR M R EG  +PD +   S+L AC+  G    G  VH  +  +
Sbjct: 133 VSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTAS 192

Query: 398 DMQ--SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALD 445
                S+  ++ AL+DMY KC  +  A  VF ++  K+++ W  ++           AL+
Sbjct: 193 GFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALE 252

Query: 446 LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           LF    ++   PD   ++ ++   A  A +E+GR++H Y ++     D +  N+IVDMY+
Sbjct: 253 LFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYL 312

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG+   A  +F  + A +++SWT M+ G G HG G +A+A F +MR  G+EPDEV++++
Sbjct: 313 KCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLA 372

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           +L ACSH+GLVDE  R+F+ +R +  + PK EHYACMVDLL R G L EA   I  MP+ 
Sbjct: 373 LLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPME 432

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           P   +W +LL  CR+H +V +  +  + +  ++ DN   YV L+NV AEA +W E  K+R
Sbjct: 433 PTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVR 492

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGS---SHPHAKKIESLLKRLRLEMKRE-GY- 739
           + + RRGLKK  GCSW+E+  +V+ F  GG    +HP A  I  +L+ +   M+ + GY 
Sbjct: 493 DAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYN 552

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAF-----GILNLPAGQTIRVTKNLRVCGDCH 794
               R+AL + DE  +  +L  HSE+LA+       G+     G+ IRV KNLRVCGDCH
Sbjct: 553 ADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCH 612

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           E  K +S   RR +V+RD+NRFH F+ G CSC+ +W
Sbjct: 613 EFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 205/453 (45%), Gaps = 61/453 (13%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAA-DSY 199
           M+V CG+L     VF  + +  V  W  LM  + + G+    L L  +M++   AA + Y
Sbjct: 1   MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60

Query: 200 TFSCVLKCLAVVGNSR--------------------------------RVKDAHKLFDEL 227
           T S  LK   VVG++                                 R+ DA ++FD  
Sbjct: 61  TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120

Query: 228 S-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL--GFNVDLATMVTVLSGCANCGALM 284
                + +WN M+SGY   G     L VF+EM         D  T  ++L  C+  GA  
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180

Query: 285 FGRAVHAFALKACFSKEIS--FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
            G  VHA    + FS   +      L+DMY KC  L  A++VFE++  ++V+ WT+++ G
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           +A+EG    A+ LFR   R G  PD + ++S++   A   L+E G+ VH Y  ++   + 
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 300

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD----------LFVAMLQ 452
           +   N+++DMY KCG   +AE +F +M   ++VSW TM+  L           LF  M  
Sbjct: 301 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 360

Query: 453 -NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA------IVDMYVK 505
              EPD VT   +L AC+    ++  R     I R     DR V         +VD+  +
Sbjct: 361 GGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRR-----DRTVRPKAEHYACMVDLLGR 415

Query: 506 CGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
            G L  AR L   +P +  +  W  +++   +H
Sbjct: 416 AGELREARDLIRTMPMEPTVGVWQTLLSACRVH 448



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 183/378 (48%), Gaps = 23/378 (6%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDV 368
           MY KCG+LD A  VF  M +R+VVSWT+++ G+ R G   G +RL  G +R   E  P+ 
Sbjct: 1   MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLL-GEMRTASEAAPNE 59

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           Y +++ L AC   G    G  +H        Q    V+++L+ +Y+K G + DA  VF+ 
Sbjct: 60  YTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDG 119

Query: 429 MPV-KDIVSWNTMIG----------ALDLFVAMLQN---FEPDGVTMACILPACASLAAL 474
             +   I +WN M+           AL +F  M ++    +PD  T A +L AC+ L A 
Sbjct: 120 AGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGAT 179

Query: 475 ERGREIHGYILRHGISADRN--VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
             G ++H  +   G S   N  +A A+VDMYVKC  L +A  +F+ +  K++I WT ++ 
Sbjct: 180 REGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVV 239

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           G+   G   +A+  F    ++G  PD     SV+   +   LV++G R  +    +    
Sbjct: 240 GHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQG-RQVHCYGIKDPTG 298

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
             +     +VD+  + G   EA R    M  AP+   W +++ G   H   + A  + E 
Sbjct: 299 TDVSAGNSIVDMYLKCGLPDEAERMFREMR-APNVVSWTTMVNGLGKHGLGREAVALFEE 357

Query: 653 VFE--LEPDNTGYYVLLA 668
           +    +EPD   Y  LL+
Sbjct: 358 MRAGGVEPDEVTYLALLS 375



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 184/397 (46%), Gaps = 40/397 (10%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           + ++ ++  +  T  + L+ C  +     G  +H +   +G    D V+ S LV ++   
Sbjct: 49  MRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHD-VVASSLVLVYSKG 107

Query: 146 GDLKEGRRVFNKIDNGK-VFIWNLLMHEYSKTGNFKESLYLFKKMQSL--GIAADSYTFS 202
           G + + RRVF+    G  +  WN ++  Y+  G+ +++L +F++M+        D +TF+
Sbjct: 108 GRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFA 167

Query: 203 CVLKCLAVVGNSR----------------------------------RVKDAHKLFDELS 228
            +LK  + +G +R                                  R+  A ++F+ L 
Sbjct: 168 SLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLE 227

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            ++V+ W  ++ G+   G   + LE+F+     G   D   + +V+   A+   +  GR 
Sbjct: 228 RKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQ 287

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VH + +K     ++S  N+++DMY KCG  D A R+F +M   +VVSWT+M+ G  + G+
Sbjct: 288 VHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGL 347

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+ LF  M   G+EPD     ++L AC+  GL++  +     I+ +          A
Sbjct: 348 GREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYA 407

Query: 409 LM-DMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            M D+  + G + +A  +   MP++  V  W T++ A
Sbjct: 408 CMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSA 444



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 163/403 (40%), Gaps = 73/403 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
            +NA +  +   G+   A+    E+     + + D  T+ S+L+ C+ L +  +G +VH+
Sbjct: 128 TWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHA 187

Query: 121 IICESGI-VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
            +  SG     + +L   LV M+V C  L    +VF +++   V  W  ++  +++ G  
Sbjct: 188 AMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQV 247

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCL---AVVGNSRRVK------------------ 218
            E+L LF++    G   DS+  S V+  L   A+V   R+V                   
Sbjct: 248 TEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSI 307

Query: 219 -----------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
                      +A ++F E+   +VVSW  M++G   +G+  + + +F+EM   G   D 
Sbjct: 308 VDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDE 367

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            T + +LS C+           HA  +  C              Y  C   D  +R    
Sbjct: 368 VTYLALLSACS-----------HAGLVDEC------------RRYFSCIRRDRTVRP--- 401

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
                   +  M+    R G    A  L R M    +EP V    ++L AC     + +G
Sbjct: 402 ----KAEHYACMVDLLGRAGELREARDLIRTMP---MEPTVGVWQTLLSACRVHKDVAVG 454

Query: 388 KDVHDYIKENDMQSSL-YVSNALMDMYAKCGSMADAESVFNQM 429
           ++  D +   D  + + YV+  L ++ A+ G   +   V + M
Sbjct: 455 REAGDVLLAMDGDNPVNYVT--LSNVLAEAGEWRECHKVRDAM 495


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/628 (37%), Positives = 345/628 (54%), Gaps = 13/628 (2%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           R  DA  +F  +  ++V SW  M++ +  N   ++    F+ ML  G N     +   LS
Sbjct: 25  RFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPGEVGISIFLS 84

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C +   +  GR++    L     +E      L+ +Y K G    A  VF +M  R VV+
Sbjct: 85  ACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVA 144

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W++M+A YAR G    A+ LFR M  +G+ P+   + S L ACA  G L  G  +H  ++
Sbjct: 145 WSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVE 204

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD---------- 445
              +QS + V  AL+++Y KCG +  A   F Q+  K++V+W+ +  A            
Sbjct: 205 AQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIR 264

Query: 446 -LFVAMLQNFEPDGVTMACILPACASLAALERGREIHG--YILRHGISADRNVANAIVDM 502
            L    L+   P+  T   +L ACA++AAL++GR IH   ++L  G+ +D  V  A+V+M
Sbjct: 265 VLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNM 324

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG L LA ++FD I   DL+ W  +IA    HG    A+  F  MR  G++P  ++F
Sbjct: 325 YSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITF 384

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
            SVL+ACSH+G++D+G + F     +  I P+ EH+ CMVDLL R G + ++   +  MP
Sbjct: 385 TSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMP 444

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
             P    W + L  CR +  +  A   AE++F+L+P     YVLL+N+YA+A +W +V +
Sbjct: 445 FEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVAR 504

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R+ +      K  G SWIE+K +V+ F++G   HP   +I + L+RL   MK  GY P 
Sbjct: 505 MRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPD 564

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           T   L +  +  KE  +  HSEKLAMAF +L  P G  IRV KNLRVC DCH  +KF+SK
Sbjct: 565 TEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISK 624

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REIV+RD NRFH F++G CSC  +W
Sbjct: 625 LVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 177/360 (49%), Gaps = 13/360 (3%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N L+D+Y+KC   D A+ VF  +  ++V SWT M+A +A    FD     FRGM+ +GI 
Sbjct: 14  NLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGIN 73

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P    I+  L AC     + IG+ +   I    ++    V  AL+ +Y K G   DA SV
Sbjct: 74  PGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASV 133

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAAL 474
           F +M  +D+V+W+ M+           AL LF  M L    P+ VT+   L ACASL  L
Sbjct: 134 FLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDL 193

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
             G  +H  +   GI +   V  A+V++Y KCG +  A   F  I  K++++W+ + A Y
Sbjct: 194 RSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAY 253

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR-YECNIEP 593
             +    DAI   + M   G+ P+  +F+SVL AC+    + +G R    +      +E 
Sbjct: 254 ARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLES 313

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            +     +V++ S+ GNL+ A    + +    D  +W SL+     H + + A ++ E +
Sbjct: 314 DVYVLTALVNMYSKCGNLALAGNMFDKI-AHLDLVLWNSLIATNAQHGQTEKALELFERM 372



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 176/377 (46%), Gaps = 37/377 (9%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           L  C D + +  G+ +   I  +GI  ++ ++ + LV ++   G   +   VF ++ +  
Sbjct: 83  LSACTDAREITIGRSIQLAILGTGIE-EESIVQTALVSLYGKLGHCTDAASVFLRMSHRD 141

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------- 215
           V  W+ ++  Y++ G+ +E+L LF++M   G+A +  T    L   A +G+ R       
Sbjct: 142 VVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQ 201

Query: 216 -------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
                                    R++ A + F ++ +++VV+W+ + + Y  N     
Sbjct: 202 RVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRD 261

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA--FALKACFSKEISFNNTL 308
            + V   M   G   +  T V+VL  CA   AL  GR +H     L      ++     L
Sbjct: 262 AIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTAL 321

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           ++MYSKCG+L  A  +F+K+    +V W S+IA  A+ G  + A+ LF  M  EG++P +
Sbjct: 322 VNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTI 381

Query: 369 YAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
              TS+L AC+  G+L+ G K    +I ++ +         ++D+  + G + D+E +  
Sbjct: 382 ITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLL 441

Query: 428 QMPVK-DIVSWNTMIGA 443
            MP +   V+W   +GA
Sbjct: 442 HMPFEPHPVAWMAFLGA 458



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 160/378 (42%), Gaps = 61/378 (16%)

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD---------LFV--AMLQ 452
           ++ N L+D+Y KC    DA +VF+ +  K++ SW  M+ A           LF    +LQ
Sbjct: 11  FLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQ 70

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
              P  V ++  L AC     +  GR I   IL  GI  +  V  A+V +Y K G    A
Sbjct: 71  GINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDA 130

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS-- 570
            S+F  +  +D+++W+ M+A Y  +G   +A+  F  M   G+ P++V+ +S L AC+  
Sbjct: 131 ASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASL 190

Query: 571 ------------------HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD--------- 603
                              SG+V  G    N+      IE   E +  +V+         
Sbjct: 191 GDLRSGALMHQRVEAQGIQSGVV-VGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAI 249

Query: 604 --LLSRTGNLSEAYRFIEMMP---VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
               +R     +A R +  M    +AP++T + S+L  C     +K   ++ E +  L  
Sbjct: 250 SAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGG 309

Query: 659 D-NTGYYVL--LANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
              +  YVL  L N+Y++         + +KI+   L       W       N  +A  +
Sbjct: 310 GLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDL-----VLW-------NSLIATNA 357

Query: 716 SHPHAKKIESLLKRLRLE 733
            H   +K   L +R+RLE
Sbjct: 358 QHGQTEKALELFERMRLE 375



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 37/258 (14%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           ++A +  +   G+  +A+ +    +   +  +  T  S L  CA L  L  G  +H  + 
Sbjct: 145 WSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVE 204

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             GI     V+G+ LV ++  CG ++     F +I    V  W+ +   Y++    ++++
Sbjct: 205 AQGIQ-SGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAI 263

Query: 184 YLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSRRVKD--------------------- 219
            +  +M   G+A +S TF  VL     +A +   RR+ +                     
Sbjct: 264 RVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVN 323

Query: 220 ----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                     A  +FD+++  D+V WN +I+    +G  EK LE+F+ M   G    + T
Sbjct: 324 MYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIIT 383

Query: 270 MVTVLSGCANCGALMFGR 287
             +VL  C++ G L  GR
Sbjct: 384 FTSVLFACSHAGMLDQGR 401



 Score = 45.8 bits (107), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 2/143 (1%)

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           +R + N ++D+Y KC     A ++F  I +K++ SWT+M+A +  +         F  M 
Sbjct: 9   NRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGML 68

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
             GI P EV     L AC+ +  +  G R   +      IE +      +V L  + G+ 
Sbjct: 69  LQGINPGEVGISIFLSACTDAREITIG-RSIQLAILGTGIEEESIVQTALVSLYGKLGHC 127

Query: 612 SEAYRFIEMMPVAPDATIWGSLL 634
           ++A      M    D   W +++
Sbjct: 128 TDAASVFLRMS-HRDVVAWSAMV 149


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/577 (38%), Positives = 339/577 (58%), Gaps = 11/577 (1%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           +D++ +   L  CA   +L+ G++ H  A+      +    N L+++Y+KCG  D A  V
Sbjct: 55  IDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLV 114

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F+ M  RS+VSW +MIAGY   G    A++LF  M REG     + ++S + ACA    +
Sbjct: 115 FDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAI 174

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
              K +H    +  + S+ +V  A++D+YAKC  + DA  VF +MP + +V+W+++    
Sbjct: 175 NECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGY 234

Query: 443 --------ALDLF-VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                   AL LF  A  +  E    T++ IL ACASLA    G ++H  IL+ G   + 
Sbjct: 235 VQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNF 294

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            VA ++VD+Y +CG +  A +LF  +  K+++ W  MIA +  H    +A+  F  M+Q 
Sbjct: 295 FVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQL 354

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           GI P+EV+++SVL  CSH+GLV++G  +F+++  +  +EP + HY+CMVD+L R+G   E
Sbjct: 355 GIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDE 414

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A+  +  MP  P A++WGSLL  CR ++ ++LA   AE +F+LEPDN G +VLL+NVYA 
Sbjct: 415 AWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAA 474

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
           +  WE V   R+ +   G KK  G SWIE KGKV++FV G   HP    I + L+ +  E
Sbjct: 475 SGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHE 534

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
           M++          L +    +KE  L  HSEKLA++FG+++LP+   I + KNLR+CGDC
Sbjct: 535 MRKFARRTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDC 594

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H   K  +    R +++RD+NRFHHFKDG CSC  FW
Sbjct: 595 HSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCGDFW 631



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 170/334 (50%), Gaps = 21/334 (6%)

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
            G+  D+ T + ++      G   R   A  +FD +  R +VSWN MI+GY  +G   + 
Sbjct: 86  FGLVTDTLTCNILINLYTKCG---RNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQA 142

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           L++F  M   G ++   T+ + +  CA   A+   + +H  ALK            +LD+
Sbjct: 143 LKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDV 202

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+KC  +  A  VFEKM ER++V+W+S+ AGY + G+ + A+ LFR   REG+E   + +
Sbjct: 203 YAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTL 262

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
           ++IL ACA   L   G  +H  I +     + +V+ +L+D+YA+CG +  A ++F  M  
Sbjct: 263 SAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEH 322

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           K++V WN MI           A+ LF  M Q    P+ VT   +L  C+    +E+GR  
Sbjct: 323 KNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHY 382

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
              ++     +DR V   +  ++  C V VL RS
Sbjct: 383 FSLLM-----SDRTVEPNV--LHYSCMVDVLGRS 409



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 187/388 (48%), Gaps = 35/388 (9%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           +++ ID       LQLCA  KSL  GK  H +    G+V D  +  + L+ ++  CG   
Sbjct: 51  DRNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDT-LTCNILINLYTKCGRND 109

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL---- 205
             R VF+ +    +  WN ++  Y+ +G   ++L LF +M   G     +T S  +    
Sbjct: 110 CARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACA 169

Query: 206 ------KC---------LAVVGNS-------------RRVKDAHKLFDELSDRDVVSWNC 237
                 +C         LA+  NS               +KDA  +F+++ +R +V+W+ 
Sbjct: 170 AKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSS 229

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           + +GY+ NG+ E+ L +F+     G  +   T+  +LS CA+    + G  +HA  LK  
Sbjct: 230 LFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCG 289

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F        +L+D+Y++CG ++ A  +F  M  ++VV W +MIA ++R      A+ LF 
Sbjct: 290 FHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFE 349

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKC 416
            M + GI P+     S+L  C+  GL+E G+     +  +  ++ ++   + ++D+  + 
Sbjct: 350 KMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRS 409

Query: 417 GSMADAESVFNQMPVKDIVS-WNTMIGA 443
           G   +A  + N+MP +   S W +++G+
Sbjct: 410 GKTDEAWELLNKMPFEPTASMWGSLLGS 437



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/344 (22%), Positives = 150/344 (43%), Gaps = 49/344 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  +   G   +A+++      E + +   T  S +  CA   ++ + K++H+I 
Sbjct: 125 SWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIA 184

Query: 123 CESGIVID-DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            +  + +D +  +G+ ++ ++  C  +K+   VF K+    +  W+ L   Y + G  +E
Sbjct: 185 LK--LALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEE 242

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLA-------------------------------- 209
           +L+LF+  Q  G+    +T S +L   A                                
Sbjct: 243 ALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVD 302

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           V     +++ A+ LF  +  ++VV WN MI+ +  +  + + + +F++M  LG   +  T
Sbjct: 303 VYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVT 362

Query: 270 MVTVLSGCANCGALMFGRAVHAFAL---KACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
            ++VLS C++ G +  GR  H F+L          +   + ++D+  + G  D A  +  
Sbjct: 363 YLSVLSVCSHAGLVEKGR--HYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLN 420

Query: 327 KMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE--GIEPD 367
           KM  E +   W S++ G  R       IRL R    +   +EPD
Sbjct: 421 KMPFEPTASMWGSLL-GSCRN---YNNIRLARIAAEQLFQLEPD 460


>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/591 (37%), Positives = 333/591 (56%), Gaps = 53/591 (8%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +HA  L+         N  L   Y+  G L  ++ +F +    +V  WT +I  +A   +
Sbjct: 42  IHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDL 101

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
           F  A+  +  M+   I+P+ + ++S+L AC     L   + VH +  +  + S LYVS  
Sbjct: 102 FHHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSHAIKFGLSSHLYVSTG 157

Query: 409 LMDMYAKCGSMADAESVFNQMP-------------------------------VKDIVSW 437
           L+D YA+ G +A A+ +F+ MP                               +KD+V W
Sbjct: 158 LVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCW 217

Query: 438 NTMIG----------ALDLF--------VAMLQNFEPDGVTMACILPACASLAALERGRE 479
           N MI           AL  F                P+ +T+  +L +C  + ALE G+ 
Sbjct: 218 NVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKW 277

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +H Y+  +GI  +  V  A+VDMY KCG L  AR +FD++  KD+++W  MI GYG+HGF
Sbjct: 278 VHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGF 337

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
             +A+  F++M   G++P +++F++VL AC+H+GLV +GW  F+ M+    +EPK+EHY 
Sbjct: 338 SDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYG 397

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           CMV+LL R G + EAY  +  M V PD  +WG+LL  CRIH  V L E++AE +      
Sbjct: 398 CMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLA 457

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           ++G YVLL+N+YA A  W  V K+R  +   G++K PGCS IE+K +V+ FVAG   HP 
Sbjct: 458 SSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRHPR 517

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
           +K I S+L+++   +K   Y PKT   L +  E EKE +L  HSEKLA+AFG+++   G 
Sbjct: 518 SKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSEKLALAFGLISTSPGA 577

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            I++ KNLRVC DCH + K MSK + R+I++RD NRFHHF++G CSCR +W
Sbjct: 578 AIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 171/402 (42%), Gaps = 69/402 (17%)

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLL 169
           KS     ++H+ +   G+     +L  KL   + + G L     +F++  N  VF+W  +
Sbjct: 34  KSTHHLLQIHAALLRRGL-HHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHI 92

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV------------------- 210
           ++ ++    F  +L  + +M +  I  +++T S +LK   +                   
Sbjct: 93  INAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPARAVHSHAIKFGLSSHL 152

Query: 211 ---------VGNSRRVKDAHKLFDELSDR------------------------------- 230
                          V  A KLFD + +R                               
Sbjct: 153 YVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMK 212

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-------FNVDLATMVTVLSGCANCGAL 283
           DVV WN MI GY  +G   + L  F++M+ +           +  T+V VLS C   GAL
Sbjct: 213 DVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGAL 272

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G+ VH++         +     L+DMY KCG L+ A +VF+ M  + VV+W SMI GY
Sbjct: 273 ECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGY 332

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSS 402
              G  D A++LF  M   G++P      ++L ACA  GL+  G +V D +K+   M+  
Sbjct: 333 GIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPK 392

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           +     ++++  + G M +A  +   M V+ D V W T++ A
Sbjct: 393 VEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWA 434



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 123/309 (39%), Gaps = 75/309 (24%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-------IAADS 198
           G L E R +F  +    V  WN+++  Y++ G   E+L  F+KM  +        +  + 
Sbjct: 197 GMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNE 256

Query: 199 YTFSCVLKCLAVVG-------------------NSR-------------RVKDAHKLFDE 226
            T   VL     VG                   N R              ++DA K+FD 
Sbjct: 257 ITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDV 316

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           +  +DVV+WN MI GY  +G +++ L++F EM  +G      T V VL+ CA+ G +   
Sbjct: 317 MEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLV--- 373

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
                       SK     +++ D Y                 E  V  +  M+    R 
Sbjct: 374 ------------SKGWEVFDSMKDGYGM---------------EPKVEHYGCMVNLLGRA 406

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS-LYV 405
           G    A  L R M    +EPD     ++L AC     + +G+++ + +  N + SS  YV
Sbjct: 407 GRMQEAYDLVRSM---EVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYV 463

Query: 406 SNALMDMYA 414
              L +MYA
Sbjct: 464 --LLSNMYA 470



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 9/173 (5%)

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           K + +  T  ++L  C  + +LE GK VHS +  +GI ++  V G+ LV M+  CG L++
Sbjct: 251 KVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRV-GTALVDMYCKCGSLED 309

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
            R+VF+ ++   V  WN ++  Y   G   E+L LF +M  +G+     TF  VL   A 
Sbjct: 310 ARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAH 369

Query: 211 VGNSRRVKDAHKLFDELSD-----RDVVSWNCMISGYIANGVAEKGLEVFKEM 258
            G    V    ++FD + D       V  + CM++     G  ++  ++ + M
Sbjct: 370 AG---LVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSM 419


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 264/770 (34%), Positives = 413/770 (53%), Gaps = 59/770 (7%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG--KVFIWNLLMHE 172
           G++VH++  + G+   D  +G+ LV M+  CG +++  +VF  I +    +  WN LM  
Sbjct: 87  GRQVHALAAKLGLP-GDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAA 145

Query: 173 YSKTGNFKESLYLFKK-MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLF------- 224
            S  G+ +  L LF+  + ++G   D  T   VL   A +G S   +  H L        
Sbjct: 146 LS--GDPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDA 203

Query: 225 ---------------DELSDRD--------VVSWNCMISGYIANGVAEKGLEVFKEML-- 259
                           EL+D +        VVSWN M+  Y  N  A     + ++M   
Sbjct: 204 PARVGNALVDMYAKCGELADAERAFPEAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQIK 263

Query: 260 -NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF-SKEISFNNTLLDMYSKCGD 317
            +     D  T+++VL  C+    L   R +HAF ++    +      N L+  Y +CG 
Sbjct: 264 EHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGR 323

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAITSILH 376
           L  A RVF  +  ++V SW ++I+ +A++     AI LF  M    G++PD ++I S+L 
Sbjct: 324 LLHADRVFTDIRRKTVSSWNTLISAHAQQNTA-AAIELFIQMTNACGLKPDGFSIGSLLM 382

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD-AESVFNQMPVKDIV 435
           ACA    L   K  H +I  N ++    +  +L+  Y +C      A  +F+ M  K  V
Sbjct: 383 ACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEV 442

Query: 436 SWNTMIG----------ALDLFVAMLQNFE---PDGVTMACILPACASLAALERGREIHG 482
            W  MI           +L LF  M Q+ E      ++    L AC+ L+++  G+E+H 
Sbjct: 443 LWIAMISGYSQNGLPGESLQLFREM-QSVEGHCSSVISATSALMACSELSSVRLGKEMHC 501

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL-ISWTIMIAGYGMHGFGC 541
           + L+  +  D  ++++++DMY KCG +  AR+ FD + A+D  +SWT MI GY ++G G 
Sbjct: 502 FALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGR 561

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR-YECNIEPKLEHYAC 600
           +A+  +  MR+ G+EPDE +++ +L AC H+G+++EG RFF+ MR +   IE KLEHY+C
Sbjct: 562 EAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSC 621

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           ++ +LSR G  ++A   +  MP  PDA I  S+L  C IH E +L   VAE + ELEPD 
Sbjct: 622 VIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERLLELEPDK 681

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
             +YVL +N+YA + +W++++K+R+ +   G+ K PGCSWI++ GKV  FVAG + HP  
Sbjct: 682 AEHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGENPHPEM 741

Query: 721 KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
           +++  + + L   ++  GY P T   L   +E EK  AL  HSEK A+ FG+L      T
Sbjct: 742 EQVRGMWRSLEERIREIGYVPDTTVVLHELEEEEKVEALWWHSEKQAVTFGLLRTATPAT 801

Query: 781 IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +RV KN+R+C DCH  A+ +SK   R+IV+RD  RFHHF+ G CSC  +W
Sbjct: 802 VRVFKNIRMCKDCHNAARLISKVTGRDIVVRDKKRFHHFRGGICSCGDYW 851



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 244/557 (43%), Gaps = 91/557 (16%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D  T  ++L +CA L   E G+ VH +  +SG      V G+ LV M+  CG+L +  R
Sbjct: 168 VDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARV-GNALVDMYAKCGELADAER 226

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ---SLGIAADSYTFSCVLKC--- 207
            F +  +  V  WN+++  Y++      +  L + MQ      + AD  T   VL     
Sbjct: 227 AFPEAPS--VVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSG 284

Query: 208 ------------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNC 237
                                         +A  G   R+  A ++F ++  + V SWN 
Sbjct: 285 PTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNT 344

Query: 238 MISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
           +IS +     A   +E+F +M N  G   D  ++ ++L  CA+   L+  +A H F L+ 
Sbjct: 345 LISAHAQQNTA-AAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRN 403

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRV-FEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
              ++     +LL  Y +C   +   RV F+ M E+  V W +MI+GY++ G+   +++L
Sbjct: 404 GLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQL 463

Query: 356 FRGMVR-EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           FR M   EG    V + TS L AC+    + +GK++H +  + D+    ++S++L+DMY+
Sbjct: 464 FREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYS 523

Query: 415 KCGSMADAESVFNQMPVKDI-VSWNTMIG----------ALDLFVAM-LQNFEPDGVTMA 462
           KCG + DA + F+++  +D  VSW  MI           A++L+  M  +  EPD  T  
Sbjct: 524 KCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYL 583

Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
            +L AC     LE G      +  H    +  +       +  C + +L+R+        
Sbjct: 584 GLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLE------HYSCVIGMLSRA-------- 629

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
                          G   DA+A   +M Q   EPD     SVL AC   G  + G    
Sbjct: 630 ---------------GRFADAVALMAEMPQ---EPDAKILSSVLSACHIHGEAELG---S 668

Query: 583 NMMRYECNIEP-KLEHY 598
           ++      +EP K EHY
Sbjct: 669 DVAERLLELEPDKAEHY 685



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 163/330 (49%), Gaps = 26/330 (7%)

Query: 262 GFNVDLATMVTVLSGCA--NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
           G   D  T+      C     GA   GR VHA A K     +    N+L+ MY +CG ++
Sbjct: 61  GIAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVE 120

Query: 320 GAIRVFEKMGE--RSVVSWTSMIAGYAREGVFDGAIRLFRG-MVREGIEPDVYAITSILH 376
            A +VF  + +  R++VSW +++A  A  G     + LFR  +V  G   D   + ++L 
Sbjct: 121 DAEKVFGGIPDAARNIVSWNALMA--ALSGDPRRGLELFRDCLVAVGGMVDEATLVTVLP 178

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
            CA  G  E G+ VH    ++   +   V NAL+DMYAKCG +ADAE  F + P   +VS
Sbjct: 179 MCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEAP--SVVS 236

Query: 437 WNTMIGAL--------------DLFVAMLQNFEPDGVTMACILPACASLAALERGREIHG 482
           WN M+GA               D+ +    +   D +T+  +LPAC+    L R RE+H 
Sbjct: 237 WNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRELHA 296

Query: 483 YILRHGI-SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
           + +R G+ +A   V NA+V  Y +CG L+ A  +F  I  K + SW  +I+ +       
Sbjct: 297 FTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQNTAA 356

Query: 542 DAIATFNDMRQA-GIEPDEVSFISVLYACS 570
            AI  F  M  A G++PD  S  S+L AC+
Sbjct: 357 -AIELFIQMTNACGLKPDGFSIGSLLMACA 385



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 123/259 (47%), Gaps = 31/259 (11%)

Query: 336 WTSMIAGYAREG--VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-----K 388
           W +++A ++R G      A+        EGI PD + +     +C   G L +G     +
Sbjct: 32  WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSC---GFLRVGAAAAGR 88

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP--VKDIVSWNTMIGAL-- 444
            VH    +  +    +V N+L+ MY +CG + DAE VF  +P   ++IVSWN ++ AL  
Sbjct: 89  QVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALSG 148

Query: 445 ----------DLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                     D  VA+      D  T+  +LP CA+L   E GR +HG   + G  A   
Sbjct: 149 DPRRGLELFRDCLVAVGGMV--DEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPAR 206

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR--- 551
           V NA+VDMY KCG L  A   F   P+  ++SW +M+  Y  +     A     DM+   
Sbjct: 207 VGNALVDMYAKCGELADAERAFPEAPS--VVSWNVMLGAYTRNREAGAAFGLLRDMQIKE 264

Query: 552 QAGIEPDEVSFISVLYACS 570
              +  DE++ +SVL ACS
Sbjct: 265 HGSVPADEITVLSVLPACS 283


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 251/700 (35%), Positives = 388/700 (55%), Gaps = 37/700 (5%)

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
            G+++  R  F  +       +N L+  Y +      +L LF++M S  +A    +++ +
Sbjct: 30  AGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA----SYNAL 85

Query: 205 LKCLAVVGNSRRVKDAHKLFDELS-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
           +  L++    + + DA      +     VVS+  ++ GY+ +G+    + +F++M     
Sbjct: 86  ISGLSL--RRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNH 143

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFAL-KACFSKEISFNNTLLDMYSKCGDLDGAI 322
                   TVL G    G L  GR   A  L      +++     +L  Y + G +  A 
Sbjct: 144 -----VSYTVLLG----GLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEAR 194

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
            +F++M +R+VVSWT+MI+GYA+ G  + A +LF  M     E +  + T++L      G
Sbjct: 195 ALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLVGYIQAG 250

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
            +E   ++ + + E+ + +     NA+M  + + G +  A++VF +M  +D  +W+ MI 
Sbjct: 251 HVEDAAELFNAMPEHPVAAC----NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIK 306

Query: 443 A----------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
           A          L  F  ML +   P+  ++  IL  CA+LA L+ GRE+H  +LR     
Sbjct: 307 AYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM 366

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D    +A++ MY+KCG L  A+ +F     KD++ W  MI GY  HG G  A+  F+DMR
Sbjct: 367 DVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMR 426

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
            AG+ PD +++I  L ACS++G V EG   FN M    +I P  EHY+CMVDLL R+G +
Sbjct: 427 LAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLV 486

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
            EA+  I+ MPV PDA IWG+L+  CR+H   ++AE  A+ + ELEP N G YVLL+++Y
Sbjct: 487 EEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIY 546

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS-SHPHAKKIESLLKRL 730
               +WE+  K+R+ IS R L K+PGCSWIE   +V++F +G   +HP    I  +L++L
Sbjct: 547 TSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKL 606

Query: 731 RLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVC 790
              +   GY     + L + DE +K  +L  HSE+ A+A+G+L +P G  IRV KNLRVC
Sbjct: 607 DGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVC 666

Query: 791 GDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           GDCH   K ++K   REI+LRD+NRFHHFKDG CSCR +W
Sbjct: 667 GDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 172/380 (45%), Gaps = 47/380 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICES 125
           + A +  +C+ G + +A  +    E  K +  ++ +++   A    +   +K+  ++ E 
Sbjct: 177 WTAMLSGYCQAGRITEARALF--DEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER 234

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
                + V  + ++  ++  G +++   +FN +    V   N +M  + + G        
Sbjct: 235 -----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRG-------- 281

Query: 186 FKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                                          V  A  +F+++ +RD  +W+ MI  Y  N
Sbjct: 282 ------------------------------MVDAAKTVFEKMCERDDGTWSAMIKAYEQN 311

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
               + L  F+EML  G   +  +++++L+ CA    L +GR VHA  L+  F  ++   
Sbjct: 312 EFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAV 371

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           + L+ MY KCG+LD A RVF     + +V W SMI GYA+ G+ + A+ +F  M   G+ 
Sbjct: 372 SALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAES 424
           PD       L AC+  G ++ G+++ + +  N  ++      + ++D+  + G + +A  
Sbjct: 432 PDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFD 491

Query: 425 VFNQMPVK-DIVSWNTMIGA 443
           +   MPV+ D V W  ++GA
Sbjct: 492 LIKNMPVEPDAVIWGALMGA 511



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 166/401 (41%), Gaps = 75/401 (18%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI- 364
           N  +   ++ G+++GA   FE M  R+  S+ +++AGY R  + D A+ LFR M    + 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 365 ----------------------------EPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
                                        P V + TS+L      GLL     +   + E
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 397 NDMQSSLYVSNALMDM---------------------------YAKCGSMADAESVFNQM 429
            +  S   +   L+D                            Y + G + +A ++F++M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGRE 479
           P +++VSW  MI           A  LF  M +  E   V+   +L        +E   E
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNE---VSWTAMLVGYIQAGHVEDAAE 257

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +   +  H ++A     NA++  + + G++  A+++F+ +  +D  +W+ MI  Y  + F
Sbjct: 258 LFNAMPEHPVAA----CNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEF 313

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
             +A++TF +M   G+ P+  S IS+L  C+   ++D G R  +     C+ +  +   +
Sbjct: 314 LMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYG-REVHAAMLRCSFDMDVFAVS 372

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
            ++ +  + GNL +A R         D  +W S++ G   H
Sbjct: 373 ALITMYIKCGNLDKAKRVFHTFE-PKDIVMWNSMITGYAQH 412



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 137/328 (41%), Gaps = 55/328 (16%)

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLF--------- 447
           NA +   A+ G++  A + F  MP++   S+N ++           AL LF         
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 448 --------VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD------- 492
                   +++ +   PD       +P   S+ +      + GY+ RHG+ AD       
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFT--SLLRGYV-RHGLLADAIRLFQQ 137

Query: 493 ---RNVANAIVDM--YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
              RN  +  V +   +  G +  AR LFD +P +D+++WT M++GY   G   +A A F
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALF 197

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
           ++M +  +    VS+ +++   + +G V+   + F +M     +      +  M+    +
Sbjct: 198 DEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVS-----WTAMLVGYIQ 248

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            G++ +A      MP  P A    +++ G      V  A+ V E + E    + G +  +
Sbjct: 249 AGHVEDAAELFNAMPEHPVAAC-NAMMVGFGQRGMVDAAKTVFEKMCE---RDDGTWSAM 304

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKN 695
              Y + E   E      ++  RG++ N
Sbjct: 305 IKAYEQNEFLMEALSTFREMLWRGVRPN 332


>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
 gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
          Length = 744

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 256/775 (33%), Positives = 397/775 (51%), Gaps = 94/775 (12%)

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD-----LKEGRRVFNKIDNGKVF 164
           +++    ++H+ +  SG ++        L+   V C +     L+    +F+++     F
Sbjct: 10  RTVRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMPPS-TF 68

Query: 165 IWNLLMHEYSKTG-NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK----- 218
           +++  +   S+ G +      LF++M+  G+  D +TF  + KC +       +      
Sbjct: 69  LFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTML 128

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
            A  L   L        N +I  YI  G+A      F E+       D      ++SG A
Sbjct: 129 HAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEI----HVKDAVAWTMLISGLA 184

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
             G L             C ++ +                        +   R V+SWTS
Sbjct: 185 KMGML-------------CDTQLL----------------------LSQAPVRDVISWTS 209

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +IA Y+R      A+  F+ M+  GI PD   + ++L ACA    LE+G+ +H  ++E  
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269

Query: 399 MQSSLYVSNALMDMYAKCGSMADAE--------------------------------SVF 426
           M +S  +  AL+DMYAKCG    A+                                S+F
Sbjct: 270 MPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLF 329

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALE 475
           ++M V+DI+++N+M+           AL LF++M + +   D  T+  +L ACASL AL+
Sbjct: 330 DEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQ 389

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
           +GR +H  I +  + AD  +  A++DMY+KCG +  A  +F  +  +D+ +WT MIAG  
Sbjct: 390 QGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLA 449

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
            +G G  A+  F  MR  G +P+ VS+I+VL ACSHS L++EG  +F+ MR   NI P++
Sbjct: 450 FNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQI 509

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           EHY CM+DLL R+G L EA   ++ MP+ P+A IW S+L  CR+H  + LA+  AEH+ +
Sbjct: 510 EHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLK 569

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           LEPD  G YV L N+Y ++ +WE   K+R  +  R +KK  G S I + G+V+ FV    
Sbjct: 570 LEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDK 629

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
           SHP   +I ++L+ +   +K  GY P T    ++ DE EKE AL  HSEKLA+AFG++NL
Sbjct: 630 SHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINL 689

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
                + + KNLRVC DCH   K +S+   REI++RD +RFHHF++G CSC  FW
Sbjct: 690 APNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 175/352 (49%), Gaps = 42/352 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T  ++L  CA LK LE G+ +H ++ E G+   + ++ + L+ M+  CGD    ++V
Sbjct: 238 DEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVA-LIDMYAKCGDFGHAQQV 296

Query: 155 FNKIDNG-KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           F+ +  G +   WN ++  Y K G+                                   
Sbjct: 297 FDALGRGPRPQSWNAIIDGYCKHGH----------------------------------- 321

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
              V  A  LFDE+  RD++++N M++GYI +G   + L +F  M      VD  T+V +
Sbjct: 322 ---VDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNL 378

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L+ CA+ GAL  GRA+HA   +     +I     LLDMY KCG +D A  VF++MG+R V
Sbjct: 379 LTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDV 438

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
            +WT+MIAG A  G+   A+  F  M  +G +P+  +  ++L AC+   LL  G+   D 
Sbjct: 439 HTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDE 498

Query: 394 IK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           ++   ++   +     ++D+  + G + +A  +   MP++ + V W +++ A
Sbjct: 499 MRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSA 550



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 14/220 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N+ +  +   G L +A+ +  S  +   ++D  T  ++L  CA L +L+ G+ +H+ I
Sbjct: 339 TFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACI 398

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            E  +V  D  LG+ L+ M++ CG + E   VF ++    V  W  ++   +  G  K +
Sbjct: 399 -EQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAA 457

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-----DRDVVSWNC 237
           L  F +M+  G   +S ++  V   L    +S  + +    FDE+         +  + C
Sbjct: 458 LEHFYQMRCDGFQPNSVSYIAV---LTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGC 514

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
           MI     +G+ ++ +++ K M       +     ++LS C
Sbjct: 515 MIDLLGRSGLLDEAMDLVKTM---PIQPNAVIWASILSAC 551


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/692 (34%), Positives = 378/692 (54%), Gaps = 31/692 (4%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL 223
           FI   L+   +K    +E   L + +   G   D    + +L+  A  G+   + DA ++
Sbjct: 11  FIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS---LDDAKRV 67

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           F+ +  +D+ +W+ +IS Y   G  E  + +++ M+  G   ++ T    L GCA+   L
Sbjct: 68  FEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGL 127

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             GRA+H   L +   ++    ++LL+MY KC ++  A +VFE M  R+V S+T+MI+ Y
Sbjct: 128 ADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAY 187

Query: 344 AREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
            + G    A+ LF  M + E IEP+ Y   +IL A    G LE G+ VH ++      ++
Sbjct: 188 VQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTN 247

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQ 452
           + V NAL+ MY KCGS  +A  VF+ M  ++++SW +MI A          L+LF  M  
Sbjct: 248 VVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM-- 305

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
           + EP GV+ +  L ACA L AL+ GREIH  ++   + A   +  +++ MY +CG L  A
Sbjct: 306 DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHL-ASPQMETSLLSMYARCGSLDDA 364

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           R +F+ +  +D  S   MIA +  HG    A+  +  M Q GI  D ++F+SVL ACSH+
Sbjct: 365 RRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHT 424

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
            LV +   FF  +  +  + P +EHY CMVD+L R+G L +A   +E MP   DA  W +
Sbjct: 425 SLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMT 484

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           LL GC+ H ++   E+ A  VFEL P  T  YV L+N+YA A+++++ +++R+++  RG+
Sbjct: 485 LLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGV 544

Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHA-------KKIESLLKRLRLEMKREGYFPKTRY 745
                 S+IEI  ++++F +GG             +++ SLL  L   MK+ GY P TR 
Sbjct: 545 TTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQAGYVPDTRE 604

Query: 746 ALIN----ADEMEKEVALCGHSEKLAMAFGIL---NLPAGQTIRVTKNLRVCGDCHEMAK 798
             +       E EK+ +LC HSE+LA+A+G++   +    + +RV  + RVC DCH   K
Sbjct: 605 VYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSDCHSAIK 664

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +S    + I +RD NRFHHF+ G CSC   W
Sbjct: 665 LLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/376 (34%), Positives = 196/376 (52%), Gaps = 17/376 (4%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           M   G   D   + ++++ C    AL  GR +H   +   F  +I     LL MY+KCG 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
           LD A RVFE M  + + +W+S+I+ YAR G  + A+ L+R M+ EG+EP+V      L  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
           CA    L  G+ +H  I  + +     + ++L++MY KC  M +A  VF  M  +++ S+
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180

Query: 438 NTMIG----------ALDLFVAM--LQNFEPDGVTMACILPACASLAALERGREIHGYIL 485
             MI           AL+LF  M  ++  EP+  T A IL A   L  LE+GR++H ++ 
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
             G   +  V NA+V MY KCG  V AR +FD + A+++ISWT MIA Y  HG   +A+ 
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLL 605
            F  M    +EP  VSF S L AC+  G +DEG    + +       P++E    ++ + 
Sbjct: 301 LFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMY 355

Query: 606 SRTGNLSEAYRFIEMM 621
           +R G+L +A R    M
Sbjct: 356 ARCGSLDDARRVFNRM 371



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 239/484 (49%), Gaps = 51/484 (10%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S++  C  L++LE+G+++H  +  +G   D   L + L+ M+  CG L + +RVF  ++ 
Sbjct: 15  SLVAACTKLQALEEGRRLHEHLIITGFRTDIP-LETALLQMYAKCGSLDDAKRVFEGMEI 73

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-KCLAVVG--NSRRV 217
             +F W+ ++  Y++ G  + ++ L+++M + G+  +  TF+C L  C +V G  + R +
Sbjct: 74  KDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAI 133

Query: 218 K-----------------------------DAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                                         +A K+F+ +  R+V S+  MIS Y+  G  
Sbjct: 134 HQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEH 193

Query: 249 EKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
            + LE+F  M  +     +  T  T+L      G L  GR VH       F   +   N 
Sbjct: 194 AEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNA 253

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L+ MY KCG    A +VF+ M  R+V+SWTSMIA YA+ G    A+ LF+ M    +EP 
Sbjct: 254 LVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPS 310

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
             + +S L+ACA  G L+ G+++H  + E  + +S  +  +L+ MYA+CGS+ DA  VFN
Sbjct: 311 GVSFSSALNACALLGALDEGREIHHRVVEAHL-ASPQMETSLLSMYARCGSLDDARRVFN 369

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALER 476
           +M  +D  S N MI           AL ++  M Q   P DG+T   +L AC+  + +  
Sbjct: 370 RMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVAD 429

Query: 477 GRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGY 534
            R+     ++ HG+         +VD+  + G L  A  L + +P + D ++W  +++G 
Sbjct: 430 CRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGC 489

Query: 535 GMHG 538
             HG
Sbjct: 490 KRHG 493



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 197/413 (47%), Gaps = 50/413 (12%)

Query: 70  IGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           I  +   G  E A+ VLY    +E  + +  T+   L  CA +  L DG+ +H  I  S 
Sbjct: 83  ISAYARAGRGEMAV-VLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASK 141

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
           +  DD VL   L+ M++ C ++ E R+VF  +    V  +  ++  Y + G   E+L LF
Sbjct: 142 VPQDD-VLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELF 200

Query: 187 KKMQSL-GIAADSYTFSCVLKCLAVVGN---SRRVK------------------------ 218
            +M  +  I  ++YTF+ +L  +  +GN    R+V                         
Sbjct: 201 SRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGK 260

Query: 219 -----DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
                +A K+FD ++ R+V+SW  MI+ Y  +G  ++ L +FK M      V  +   + 
Sbjct: 261 CGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVEPSGVSFS---SA 317

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L+ CA  GAL  GR +H   ++A  +       +LL MY++CG LD A RVF +M  R  
Sbjct: 318 LNACALLGALDEGREIHHRVVEAHLASP-QMETSLLSMYARCGSLDDARRVFNRMKTRDA 376

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
            S  +MIA + + G    A+R++R M +EGI  D     S+L AC+   L+    D  D+
Sbjct: 377 FSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLV---ADCRDF 433

Query: 394 IKENDMQSSL--YVSNAL--MDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
            +   M   +   V + L  +D+  + G + DAE +   MP + D V+W T++
Sbjct: 434 FQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLL 486



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 179/374 (47%), Gaps = 42/374 (11%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M   GI  D + +TS++ AC     LE G+ +H+++     ++ + +  AL+ MYAKCGS
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPA 467
           + DA+ VF  M +KD+ +W+++I           A+ L+  M+ +  EP+ VT AC L  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           CAS+A L  GR IH  IL   +  D  + +++++MY+KC  +V AR +F+ + A+++ S+
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQA-GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           T MI+ Y   G   +A+  F+ M +   IEP+  +F ++L A    G +++G +    + 
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240

Query: 587 ---YECNI--------------EP-------------KLEHYACMVDLLSRTGNLSEAYR 616
              ++ N+               P              +  +  M+   ++ GN  EA  
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300

Query: 617 FIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEK 676
             + M V P    + S L  C +   +    ++   V E    +      L ++YA    
Sbjct: 301 LFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQMETSLLSMYARCGS 360

Query: 677 WEEVKKLREKISRR 690
            ++ +++  ++  R
Sbjct: 361 LDDARRVFNRMKTR 374



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 19/278 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           ++ + I  + + GN ++A+  L+     +    ++ S L  CA L +L++G+++H  + E
Sbjct: 281 SWTSMIAAYAQHGNPQEALN-LFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVE 339

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
           + +      + + L+ M+  CG L + RRVFN++     F  N ++  +++ G  K++L 
Sbjct: 340 AHLASPQ--METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALR 397

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVS----WNCMI 239
           ++++M+  GI AD  TF  V   L    ++  V D    F  L  D  VV     + CM+
Sbjct: 398 IYRRMEQEGIPADGITFVSV---LVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMV 454

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR--AVHAFALKAC 297
                +G      E+ + M    +  D    +T+LSGC   G L  G   A   F L   
Sbjct: 455 DVLGRSGRLGDAEELVETM---PYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPA 511

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            +    F   L +MY+     D A RV ++M ER V +
Sbjct: 512 ETLPYVF---LSNMYAAAKRFDDARRVRKEMEERGVTT 546


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 260/806 (32%), Positives = 411/806 (50%), Gaps = 69/806 (8%)

Query: 91  KSKIDT--KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG------VLGSKLVFMF 142
           +S +D   ++Y  +L+ C  L  L  GK++H+ I ESG+++DD        LG+ LV M+
Sbjct: 7   RSGVDDACRSYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMY 66

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
             CG   E +R F+ I +  +F W  ++  Y   G   ++L  F +M   G+  D   F 
Sbjct: 67  GKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFL 126

Query: 203 CVLKCLAVV-------GNSRRVKD-------------------------AHKLFDELSDR 230
             L    ++       G  R+++D                         A +LFD L  +
Sbjct: 127 AALNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMK 186

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR-AV 289
           +V+SW  ++S +  NG   +   + + M   G   D   ++T+L+ C++ G L       
Sbjct: 187 NVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMA 246

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS---VVSWTSMIAGYARE 346
           H + + +   +E      LL M+++CG +D A  +FEK+ + S   +  W +MI  YA  
Sbjct: 247 HDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHR 306

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G    A+ L   +  +G++P+     S L AC+    L+ G+ +H  I E+     + V+
Sbjct: 307 GCSKEALFLLDSLQLQGVKPNCITFISSLGACSS---LQDGRALHLLIDESGFDREVSVA 363

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQN------F 454
           NAL+ MY +CGS+ D+  +F++M  KD+ SWN+ I      G  D  + +L         
Sbjct: 364 NALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGL 423

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
           EP  VT+   + AC  LA     + +H      G+ ++  VAN +VDMY K G +  AR 
Sbjct: 424 EPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARY 483

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +FD    +++ +W  M   Y   G     +     M++ G  PD V+F+S+L  C HSGL
Sbjct: 484 IFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGL 543

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT--IWGS 632
           ++E    F  MR E  I+P  +HY+C++DLL+R G L +A  FI  + V+  A+  +W +
Sbjct: 544 LEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMA 603

Query: 633 LLCGCRIHHEVKLAEKV----AEHVFELEP----DNTGYYVLLANVYAEAEKWEEVKKLR 684
           LL  CR   +     +     A  V ++EP    D +  +V LAN+ A +  W+E   +R
Sbjct: 604 LLGACRSLGDSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIR 663

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
           + ++ +GL+K PG S I +K +++ FVAG   HP  ++I + L+RL   M   GY   T 
Sbjct: 664 KAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGYVVDTG 723

Query: 745 YALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTA 804
               N  E +K   L  HSEKLA+AFG+L+ P G ++R+ KNLR CGDCH   K +S   
Sbjct: 724 MVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIE 783

Query: 805 RREIVLRDSNRFHHFKDGRCSCRGFW 830
            REIV+RDSNRFHHF++G CSC  +W
Sbjct: 784 GREIVVRDSNRFHHFRNGSCSCGDYW 809



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 224/506 (44%), Gaps = 55/506 (10%)

Query: 81  KAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           +A+E  +   K+ +  D   + + L +C  LK LEDG  +H  I +  ++  D  +G+ L
Sbjct: 105 QALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQI-QDKLLDSDLEIGNAL 163

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS 198
           V M+  CG L   +++F+ ++   V  W +L+  +++ G  +E+  L + M   GI  D 
Sbjct: 164 VSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDK 223

Query: 199 YTFSCVLKC---------------------------------LAVVGNSRRVKDAHKLFD 225
                +L                                   L++     RV  A ++F+
Sbjct: 224 VLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFE 283

Query: 226 ELSDRD---VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +++D     +  WN MI+ Y   G +++ L +   +   G   +  T ++ L  C+   +
Sbjct: 284 KVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACS---S 340

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  GRA+H    ++ F +E+S  N L+ MY +CG L  + ++F +M E+ + SW S IA 
Sbjct: 341 LQDGRALHLLIDESGFDREVSVANALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAA 400

Query: 343 YAREGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           +A  G  D  I+L   M  E G+EP    + + + AC         K VH+  +E  ++S
Sbjct: 401 HAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLES 460

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML 451
              V+N L+DMY K G +  A  +F++   +++ +WN M GA          L L   M 
Sbjct: 461 ETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQ 520

Query: 452 QN-FEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIVDMYVKCGVL 509
           ++ + PD VT   +L  C     LE  R     + R  GI       + ++D+  + G L
Sbjct: 521 RDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGEL 580

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYG 535
             A      I      S  + +A  G
Sbjct: 581 QQAEDFIARISVSSPASSPMWMALLG 606


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 265/805 (32%), Positives = 413/805 (51%), Gaps = 111/805 (13%)

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
           G+ + + V  + +V  +V  GD+   R++F+ + +  V  WN ++  Y  +   +E+  L
Sbjct: 120 GMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNL 179

Query: 186 FKKMQSL-------------------------------GIAADSYTFSCVLKCLAVVGNS 214
           F++M                                  G+  +      VL  +  +G  
Sbjct: 180 FERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKP 239

Query: 215 RRVKDAHKLFDELS-DRDVVSWNCMISGYIAN-GVAEKGLEVFKEMLNLGFNVDLATMVT 272
             ++  H L  +   +RDVV    +++GY  +  + +  ++ F+ M       +  T  T
Sbjct: 240 GILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAAR----NEYTWST 295

Query: 273 VLSGCANCGALMFGRAVHAF-ALKACFSK----------------EISFN---------- 305
           +++  +  G +    AV+    LK+  S+                +I F+          
Sbjct: 296 IIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSW 355

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N ++  Y +   +D A  +F +M  R+ +SW  MIAGYAR G  + A+   + + R+G+ 
Sbjct: 356 NAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGML 415

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA----- 420
           P + ++TS   AC+    LE GK VH    +   Q + YV NAL+ +Y K  S+      
Sbjct: 416 PSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQI 475

Query: 421 --------------------------DAESVFNQMPVKDIVSWNTMIG----------AL 444
                                     +A  VFN MP  D+VSW T+I           A+
Sbjct: 476 FDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAV 535

Query: 445 DLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           ++F +ML   E P+   +  +L    +L A + G++IH   ++ G+ +   VANA+V MY
Sbjct: 536 EIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMY 595

Query: 504 VKCGVLVLARSL--FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
            KC     A SL  FD +  +D+ +W  +I GY  HG G +AI  +  M  AG+ P+EV+
Sbjct: 596 FKCSS---ADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVT 652

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           F+ +L+ACSHSGLVDEG +FF  M  +  + P LEHYACMVDLL R G++  A  FI  M
Sbjct: 653 FVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDM 712

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P+ PD+ IW +LL  C+IH  V++  + AE +F +EP N G YV+L+N+Y+    W+EV 
Sbjct: 713 PIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVA 772

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           K+R+ +  RG+ K+PGCSW++IK K++ FV G   H   + I + L  L   +K  GY P
Sbjct: 773 KVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVP 832

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            T + L + DE +KE +L  HSEKLA+A+G+L  P G  I++ KNLR+CGDCH   KF+S
Sbjct: 833 DTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVS 892

Query: 802 KTARREIVLRDSNRFHHFKDGRCSC 826
              +REI +RD NRFHHF++G CSC
Sbjct: 893 SVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 238/489 (48%), Gaps = 35/489 (7%)

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
           G+ L+  +   G +++ RRVF+ +       WN ++  Y + G+   +  LF  M S  +
Sbjct: 98  GTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDV 157

Query: 195 AADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
           +  S+       C     +S+ +++A  LF+ + +R+ VSW  MISGY+      +  ++
Sbjct: 158 S--SWNTMLTGYC-----HSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDM 210

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
           F+ ML  G   +   +V+VLS   + G      ++H    K  F +++     +L+ Y+K
Sbjct: 211 FRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTK 270

Query: 315 -CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
               LD A++ FE M  R+  +W+++IA  ++ G  D A  +++   R+ ++  V + TS
Sbjct: 271 DVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQ---RDPLK-SVPSRTS 326

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD 433
           +L   A  G ++  K + D I E ++ S     NA++  Y +   + +AE +FN+MP ++
Sbjct: 327 MLTGLARYGRIDDAKILFDQIHEPNVVS----WNAMITGYMQNEMVDEAEDLFNRMPFRN 382

Query: 434 IVSWNTMI------GALDLFVAMLQNFEPDGVTMACILP-----ACASLAALERGREIHG 482
            +SW  MI      G  +  +  LQ     G+  +         AC+++ ALE G+++H 
Sbjct: 383 TISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHS 442

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
             ++ G   +  V NA++ +Y K   +   R +FD +  KD +S+   ++    +    +
Sbjct: 443 LAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDE 502

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
           A   FN+M      PD VS+ +++ AC+ +   +E    F  M +    E +L +   + 
Sbjct: 503 ARDVFNNMPS----PDVVSWTTIISACAQADQGNEAVEIFRSMLH----ERELPNPPILT 554

Query: 603 DLLSRTGNL 611
            LL  +GNL
Sbjct: 555 ILLGLSGNL 563



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 159/346 (45%), Gaps = 54/346 (15%)

Query: 106 CADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI 165
           C+++++LE GK+VHS+  ++G                  C         FN       ++
Sbjct: 428 CSNIEALETGKQVHSLAVKAG------------------CQ--------FNS------YV 455

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
            N L+  Y K  +      +F +M       D+ +++  +  L     +    +A  +F+
Sbjct: 456 CNALITLYGKYRSIGSVRQIFDRM----TVKDTVSYNSFMSALV---QNNLFDEARDVFN 508

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            +   DVVSW  +IS         + +E+F+ ML+     +   +  +L    N GA   
Sbjct: 509 NMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQL 568

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ +H  A+K      +   N L+ MY KC   D +++VF+ M ER + +W ++I GYA+
Sbjct: 569 GQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIFTWNTIITGYAQ 627

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G+   AIR+++ MV  G+ P+      +LHAC+  GL++ G   H + K     SS Y 
Sbjct: 628 HGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEG---HQFFKS---MSSDYG 681

Query: 406 SNALMDMYA-------KCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
              L++ YA       + G +  AE     MP++ D V W+ ++GA
Sbjct: 682 LTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGA 727



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 131/564 (23%), Positives = 234/564 (41%), Gaps = 72/564 (12%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G L E R VF+ +    +  WN ++  Y   G       +    +SL  A          
Sbjct: 47  GRLHEAREVFDSMPFRDIIAWNSMIFAYCNNG-------MPDAGRSLADAISGGNLRTGT 99

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
             L+    + RV+DA ++FD +  R+ V+WN M++ Y+ NG      ++F  M       
Sbjct: 100 ILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMP------ 153

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
                                            S+++S  NT+L  Y     ++ A  +F
Sbjct: 154 ---------------------------------SRDVSSWNTMLTGYCHSQLMEEARNLF 180

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           E+M ER+ VSWT MI+GY        A  +FR M+ EG+ P+   + S+L A    G   
Sbjct: 181 ERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPG 240

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD-AESVFNQMPVKDIVSWNTMIGAL 444
           I + +H  + +   +  + V  A+++ Y K  +M D A   F  M  ++  +W+T+I AL
Sbjct: 241 ILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAAL 300

Query: 445 -------DLFVAMLQNFEPDGVTMACILPACASLAALER-GREIHGYILRHGISADRNVA 496
                  D F    ++       +  +    + L  L R GR     IL   I     V+
Sbjct: 301 SQAGRIDDAFAVYQRD------PLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVS 354

Query: 497 -NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            NA++  Y++  ++  A  LF+ +P ++ ISW  MIAGY  +G    A+ +   + + G+
Sbjct: 355 WNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGM 414

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNM-MRYECNIEPKLEHYAC--MVDLLSRTGNLS 612
            P   S  S  +ACS+   ++ G +  ++ ++  C    +   Y C  ++ L  +  ++ 
Sbjct: 415 LPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGC----QFNSYVCNALITLYGKYRSIG 470

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
              +  + M V  D   + S +     ++    A  V  ++    PD   +  +++    
Sbjct: 471 SVRQIFDRMTVK-DTVSYNSFMSALVQNNLFDEARDVFNNM--PSPDVVSWTTIISACAQ 527

Query: 673 EAEKWEEVKKLREKISRRGLKKNP 696
             +  E V+  R  +  R L   P
Sbjct: 528 ADQGNEAVEIFRSMLHERELPNPP 551



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 24/264 (9%)

Query: 81  KAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG-VLGSK 137
           +A+E+  S   E+   +      +L L  +L + + G+++H+I  + G+  D G V+ + 
Sbjct: 533 EAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGM--DSGLVVANA 590

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           LV M+  C    +  +VF+ ++   +F WN ++  Y++ G  +E++ +++ M S G+  +
Sbjct: 591 LVSMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPN 649

Query: 198 SYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGL 252
             TF  +L   +   +S  V + H+ F  +S    ++     + CM+   +      +G 
Sbjct: 650 EVTFVGLLHACS---HSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVD-LLGRAGDVQGA 705

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT---LL 309
           E F  + ++    D      +L  C     +  GR     A +  FS E S       L 
Sbjct: 706 EHF--IYDMPIEPDSVIWSALLGACKIHKNVEIGRR----AAEKLFSIEPSNAGNYVMLS 759

Query: 310 DMYSKCGDLDGAIRVFEKMGERSV 333
           ++YS  G  D   +V + M ER V
Sbjct: 760 NIYSSQGMWDEVAKVRKLMKERGV 783


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/733 (31%), Positives = 395/733 (53%), Gaps = 47/733 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  +C+ G  ++++++     +  +  D  T+  +L+ C+ L+ L  G +VH++ 
Sbjct: 116 SWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALA 175

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G+ ID    GS LV M+  C  L +    F  +       W   +    +   +   
Sbjct: 176 VKTGLEIDVRT-GSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRG 234

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS---- 214
           L LF +MQ LG+     +++   +  A                        VVG +    
Sbjct: 235 LELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDV 294

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 + DA + F  L +  V + N M+ G +  G+  + + +F+ M+      D+ ++
Sbjct: 295 YAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 354

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             V S CA       G+ VH  A+K+ F  +I  NN +LD+Y KC  L  A  +F+ M +
Sbjct: 355 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 414

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +  VSW ++IA   + G +D  I  F  M+R G++PD +   S+L ACA    LE G  V
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL---- 446
           HD + ++ + S  +V++ ++DMY KCG + +A+ + +++  + +VSWN ++    L    
Sbjct: 475 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKES 534

Query: 447 ------FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
                 F  ML    +PD  T A +L  CA+LA +E G++IHG I++  +  D  +++ +
Sbjct: 535 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTL 594

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY KCG +  +  +F+ +  +D +SW  MI GY +HG G +A+  F  M++  + P+ 
Sbjct: 595 VDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNH 654

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            +F++VL ACSH GL D+G R+F++M     +EP+LEH+ACMVD+L R+    EA +FI 
Sbjct: 655 ATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFIN 714

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP   DA IW +LL  C+I  +V++AE  A +V  L+PD++  Y+LL+NVYAE+ KW +
Sbjct: 715 SMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWAD 774

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V + R  + +  LKK PGCSWIE++ +++ F+ G  +HP + ++  +L  L  EMK  GY
Sbjct: 775 VSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGY 834

Query: 740 FPKTRYALINADE 752
            P +  + +  DE
Sbjct: 835 EPDSA-SFVEVDE 846



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 274/553 (49%), Gaps = 45/553 (8%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D V  + ++  +   GD+     +F+ + +  V  WN L+  Y + G F+ES+ LF +M 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141

Query: 191 SLGIAADSYTFSCVLK---------------CLAV-----------------VGNSRRVK 218
             G++ D  TF+ +LK                LAV                  G  R + 
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           DA   F  + +R+ VSW   I+G + N    +GLE+F EM  LG  V   +  +    CA
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
               L  GR +HA A+K  FS +      ++D+Y+K   L  A R F  +   +V +  +
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           M+ G  R G+   A+ LF+ M+R  I  DV +++ +  ACA       G+ VH    ++ 
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL----------FV 448
               + V+NA++D+Y KC ++ +A  +F  M  KD VSWN +I AL+           F 
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441

Query: 449 AMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            ML+   +PD  T   +L ACA+L +LE G  +H  +++ G+ +D  VA+ +VDMY KCG
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 501

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
           ++  A+ L D I  + ++SW  +++G+ ++    +A   F++M   G++PD  +F +VL 
Sbjct: 502 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 561

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
            C++   ++ G +    +  +  ++ +    + +VD+ ++ G++ ++    E +    D 
Sbjct: 562 TCANLATIELGKQIHGQIIKQEMLDDEYIS-STLVDMYAKCGDMPDSLLVFEKVE-KRDF 619

Query: 628 TIWGSLLCGCRIH 640
             W +++CG  +H
Sbjct: 620 VSWNAMICGYALH 632



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 255/521 (48%), Gaps = 30/521 (5%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL 223
           F+ N L+  Y++      +  +F  M       D+ +++ +L   +  G+   +  A  L
Sbjct: 53  FVSNCLLQMYARCAGAACARRVFDAMPR----RDTVSWNTMLTAYSHAGD---ISTAVAL 105

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           FD + D DVVSWN ++SGY   G+ ++ +++F EM   G + D  T   +L  C+    L
Sbjct: 106 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 165

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G  VHA A+K     ++   + L+DMY KC  LD A+  F  M ER+ VSW + IAG 
Sbjct: 166 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 225

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
            +   +   + LF  M R G+     +  S   +CA    L  G+ +H +  +N   S  
Sbjct: 226 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 285

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM----------IGALDLFVAMLQ- 452
            V  A++D+YAK  S+ DA   F  +P   + + N M          I A+ LF  M++ 
Sbjct: 286 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRS 345

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
           +   D V+++ +  ACA      +G+++H   ++ G   D  V NA++D+Y KC  L+ A
Sbjct: 346 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 405

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +F  +  KD +SW  +IA    +G   D I  FN+M + G++PD+ ++ SVL AC+  
Sbjct: 406 YLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAAL 465

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYA----CMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
             ++ G     +M ++  I+  L   A     +VD+  + G + EA +  + +       
Sbjct: 466 RSLEYG-----LMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG-GQQVV 519

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL 667
            W ++L G  ++ E + A+K    + +  L+PD+  +  +L
Sbjct: 520 SWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 560


>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
 gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/528 (40%), Positives = 324/528 (61%), Gaps = 13/528 (2%)

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           GD+  A ++F++M +     W +++ GY + G+ D A+ ++  M   G+ PD +    ++
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            ACA    L  G  +H ++ ++ ++    V   LM MY K G +  AE +F  M  +D+V
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202

Query: 436 SWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYI 484
           +WN +I           AL  F  M +   +PD VT+   L AC  L  LE G EI+ + 
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
              GI ++  V NA +DM  KCG +  A +LFD +P +++ISW+ +I GY ++G    A+
Sbjct: 263 REEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKAL 322

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY--ECNIEPKLEHYACMV 602
           A F+ M+  G++P+ V+F++VL ACSH+G V+EGW++FN M    + NI+P+ EHYACMV
Sbjct: 323 ALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMV 382

Query: 603 DLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTG 662
           DLL R+G+L EAY FI++MP+  D  IWG+LL  C IH  +KL + VA+ +FEL P+   
Sbjct: 383 DLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIAS 442

Query: 663 YYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKK 722
           Y+VLL+N+YA A +W  V+K+R+++ ++G +K    S +E  G+++I   G  SHP +  
Sbjct: 443 YHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSAS 502

Query: 723 IESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIR 782
           I + L+ L  +MK  GY P+T     + ++ EKE  L  HSEKLA+AF ++N      IR
Sbjct: 503 ILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIR 562

Query: 783 VTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           V KNLR+CGDCH   K +S+   REI++RD NRFHHFK+G CSC+ FW
Sbjct: 563 VMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 172/336 (51%), Gaps = 21/336 (6%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A +LFDE+       WN ++ GY+ NG+ +K + V+ +M +LG   D  T   V+  CA 
Sbjct: 88  ARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAE 147

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L  G  +H   +K       +    L+ MY K G+L  A  +F  M ER +V+W ++
Sbjct: 148 LAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNAL 207

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           IA   + G    A++ FR M   GI+PD   I S L AC   G LE G++++++ +E  +
Sbjct: 208 IAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGI 267

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
            S++ V NA +DM AKCG M  A ++F++MP ++++SW+T+IG          AL LF  
Sbjct: 268 DSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSR 327

Query: 450 ML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN------AIVDM 502
           M  Q  +P+ VT   +L AC+    +  G +   ++ +   S D+N+         +VD+
Sbjct: 328 MKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQ---SDDKNIQPRKEHYACMVDL 384

Query: 503 YVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
             + G L  A +   ++P + D   W  ++    +H
Sbjct: 385 LGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIH 420



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 170/334 (50%), Gaps = 36/334 (10%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           GD+   R++F+++   + F+WN +M  Y K G   +++ ++ KM+ LG+  D +TF  V+
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 206 KCLAVVG--------NSRRVKD------------------------AHKLFDELSDRDVV 233
           K  A +         +   VK                         A  LF  + +RD+V
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           +WN +I+  +  G + K L+ F+EM   G   D  T+V+ LS C + G L  G  ++ FA
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
            +      I  +N  LDM +KCGD+D A+ +F++M +R+V+SW+++I GYA  G  + A+
Sbjct: 263 REEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKAL 322

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND---MQSSLYVSNALM 410
            LF  M  +G++P+     ++L AC+  G +  G    +++ ++D   +Q        ++
Sbjct: 323 ALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMV 382

Query: 411 DMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           D+  + G + +A +    MP++ D   W  ++GA
Sbjct: 383 DLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGA 416



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 133/306 (43%), Gaps = 30/306 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I    + G   KA++       + I  D+ T  S L  C  L  LE G++++    
Sbjct: 204 WNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAR 263

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           E GI  +  V  ++L  M   CGD+ +   +F+++    V  W+ ++  Y+  G  +++L
Sbjct: 264 EEGIDSNIIVHNARLD-MCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKAL 322

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-------WN 236
            LF +M++ G+  +  TF  VL   +  G   RV +  + F+ ++  D  +       + 
Sbjct: 323 ALFSRMKNQGVQPNYVTFLAVLSACSHTG---RVNEGWQYFNFMAQSDDKNIQPRKEHYA 379

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
           CM+     +G  E+     K M       D      +L  CA    +  G+  H   L  
Sbjct: 380 CMVDLLGRSGHLEEAYNFIKIM---PIEADPGIWGALLGACAIHQNIKLGQ--HVADLLF 434

Query: 297 CFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKM---GERSVVSWTSMIAGYAREGVFDGA 352
             + EI+  + LL +MY+  G      +V ++M   G R V +++S+         F+G 
Sbjct: 435 ELAPEIASYHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSV--------EFNGE 486

Query: 353 IRLFRG 358
           I +  G
Sbjct: 487 IHILYG 492


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/735 (33%), Positives = 388/735 (52%), Gaps = 57/735 (7%)

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSCVLKCL 208
             RR+ +++       +NLL+  YS+ G  + SL  F + + S G+ AD +T++  L   
Sbjct: 65  HARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAAC 124

Query: 209 AVVGNSRRVKDAHKL--------------------------------FDELSDRDVVSWN 236
           +  G  R  K  H L                                FD   +RD VSWN
Sbjct: 125 SRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWN 184

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG--ALMFGRAVHAFAL 294
            ++SGY+  G  +  L VF  M   G  ++   + +V+  CA      +    AVH   +
Sbjct: 185 ALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVV 244

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE------GV 348
           KA F  ++   + ++ MY+K G L  A+ +F+ + + +VV + +MIAG  R+       V
Sbjct: 245 KAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDV 304

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+ L+  +   G+EP  +  +S++ AC   G +E GK +H  + ++  Q   ++ +A
Sbjct: 305 LREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSA 364

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPD 457
           L+D+Y   G M D    F  +P +D+V+W  MI           AL LF  +L    +PD
Sbjct: 365 LIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPD 424

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
             T++ ++ ACASLA    G +I  +  + G      + N+ + MY + G +  A   F 
Sbjct: 425 PFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQ 484

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            + + D++SW+ +I+ +  HG   DA+  FN+M  A + P+E++F+ VL ACSH GLVDE
Sbjct: 485 EMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDE 544

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           G +++  M+ E  + P ++H  C+VDLL R G L++A  FI       +  IW SLL  C
Sbjct: 545 GLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASC 604

Query: 638 RIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPG 697
           RIH +++  + VA+ + EL+P ++  YV L N+Y +A +     K+R+ +  RG+KK PG
Sbjct: 605 RIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPG 664

Query: 698 CSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM--EK 755
            SWIE++  V+ FVAG  SHP +  I S L  +  ++ +      T  +   +D+    +
Sbjct: 665 LSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDK---LTATDASSTKSDDTIRNE 721

Query: 756 EVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNR 815
           +  +  HSEKLA+A G+++LP    IRV KNLRVC DCH   K +SK+ +REIVLRD+ R
Sbjct: 722 QSWMNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIR 781

Query: 816 FHHFKDGRCSCRGFW 830
           FHHF+DG CSC  +W
Sbjct: 782 FHHFRDGSCSCADYW 796



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 240/530 (45%), Gaps = 59/530 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  I  +   G  E ++E    + +S   + D  TY + L  C+    L +GK VH++
Sbjct: 80  SFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHAL 139

Query: 122 ICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
               GI    GV + + LV M+  CGD+ + R+VF+  D      WN L+  Y + G   
Sbjct: 140 SVLEGIA--GGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQD 197

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCL-------------------------------A 209
           + L +F  M+  GI  +S+    V+KC                                A
Sbjct: 198 DMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASA 257

Query: 210 VVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGY------IANGVAEKGLEVFKEMLN 260
           +VG   +   + +A  LF  + D +VV +N MI+G       +   V  + L ++ E+ +
Sbjct: 258 MVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQS 317

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
            G      T  +V+  C   G + FG+ +H   LK CF  +    + L+D+Y   G ++ 
Sbjct: 318 RGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMED 377

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
             R F  + ++ VV+WT+MI+G  +  +F+ A+ LF  ++  G++PD + I+S+++ACA 
Sbjct: 378 GFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACAS 437

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
             +   G+ +  +  ++       + N+ + MYA+ G +  A   F +M   DIVSW+ +
Sbjct: 438 LAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAV 497

Query: 441 IG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYIL-RHG 488
           I           AL  F  M+     P+ +T   +L AC+    ++ G + +  +   + 
Sbjct: 498 ISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYA 557

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMH 537
           +S        +VD+  + G L  A +   D I   + + W  ++A   +H
Sbjct: 558 LSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIH 607



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 181/379 (47%), Gaps = 24/379 (6%)

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
           +C A     AVHA  ++A  S  +   NTLL  Y + G    A R+ ++M   + VS+  
Sbjct: 26  SCSAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNL 83

Query: 339 MIAGYAREGVFDGAIRLF-RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           +I  Y+R G  + ++  F R     G+  D +   + L AC+  G L  GK VH      
Sbjct: 84  LIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLE 143

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAML 451
            +   ++VSN+L+ MYA+CG M  A  VF+    +D VSWN ++      GA D  + + 
Sbjct: 144 GIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVF 203

Query: 452 QNFEPDGV-----TMACILPACASL--AALERGREIHGYILRHGISADRNVANAIVDMYV 504
                 G+      +  ++  CA      ++    +HG +++ G  +D  +A+A+V MY 
Sbjct: 204 AMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYA 263

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGY--GMHGFGCD----AIATFNDMRQAGIEPD 558
           K G L  A +LF  +   +++ +  MIAG        G D    A++ +++++  G+EP 
Sbjct: 264 KKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPT 323

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
           E +F SV+ AC+ +G ++ G +    +   C         A ++DL   +G + + +R  
Sbjct: 324 EFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSA-LIDLYLNSGCMEDGFRCF 382

Query: 619 EMMPVAPDATIWGSLLCGC 637
             +P   D   W +++ GC
Sbjct: 383 TSVP-KQDVVTWTAMISGC 400



 Score = 46.6 bits (109), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 12/257 (4%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T  S++  CA L     G+++     +SG       +G+  + M+   GD+    
Sbjct: 422 KPDPFTISSVMNACASLAVARTGEQIQCFATKSGFG-RFTAMGNSCIHMYARSGDVHAAV 480

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           R F ++++  +  W+ ++  +++ G  +++L  F +M    +  +  TF   L  L    
Sbjct: 481 RRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITF---LGVLTACS 537

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATM 270
           +   V +  K ++ + +   +S        + + +   G     E    +  F+ +    
Sbjct: 538 HGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIW 597

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++L+ C     +  G+ V    ++   S   S+ N L ++Y   G+L  A ++ + M E
Sbjct: 598 RSLLASCRIHRDMERGQLVADRIMELQPSSSASYVN-LYNIYLDAGELSLASKIRDVMKE 656

Query: 331 RSV-----VSWTSMIAG 342
           R V     +SW  + +G
Sbjct: 657 RGVKKEPGLSWIELRSG 673


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/669 (35%), Positives = 374/669 (55%), Gaps = 48/669 (7%)

Query: 84  EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID--DGVLGSKLVFM 141
           + L  S+     T  Y S+LQ C   KS+ + K++H+     G++       L S L   
Sbjct: 6   QALSKSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAA 65

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA-ADSYT 200
           +  CG     R++F+++ N  +F WN ++  Y+ +G   ++L LF +M + G    D+YT
Sbjct: 66  YAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYT 125

Query: 201 FSCVLKC--------------------------------LAVVGNSRRVKDAHKLFDELS 228
           +  V+K                                 +A+  N   ++ A ++FD + 
Sbjct: 126 YPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMR 185

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           +R +VSWN MI+GY  NG  ++ L VF  M+  G   D AT+V+VL  C+    L  GR 
Sbjct: 186 ERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRR 245

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VHA        ++IS  N+LLDMY+KCG++D A  +F +M +R VVSWT+M+ GY   G 
Sbjct: 246 VHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGD 305

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+ L + M  E ++P+   + S+L ACA    L+ G+ +H +     ++S + V  A
Sbjct: 306 ARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETA 365

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPD 457
           L+DMYAKC ++  +  VF++   +    WN +I           A++LF  ML +  +P+
Sbjct: 366 LIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPN 425

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
             T+  +LPA A L  L++ R +HGY++R G  +   VA  ++D+Y KCG L  A ++F+
Sbjct: 426 DATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFN 485

Query: 518 MIPAKD--LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
            IP KD  +I+W+ +IAGYGMHG G  AI+ F+ M Q+G++P+E++F S+L+ACSH+GLV
Sbjct: 486 GIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLV 545

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           DEG   F  M  +  +  + +HY C++DLL R G L EAY  I  M   P+  +WG+LL 
Sbjct: 546 DEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLG 605

Query: 636 GCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
            C IH  V+L E  A+ +FELEP NTG YVLLAN+Y+   +W + + +R  ++  GL+K 
Sbjct: 606 SCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKT 665

Query: 696 PGCSWIEIK 704
           P  S IE++
Sbjct: 666 PAHSLIEVR 674


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/730 (32%), Positives = 397/730 (54%), Gaps = 47/730 (6%)

Query: 64  KNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSI 121
           + +N+ I  F   G L +A+   +      +  D  T+  +++ C  LK+ +    +   
Sbjct: 104 RPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDT 163

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +   G+  ++ V  S L+  ++  G +    ++F+++      IWN++++ Y+K G    
Sbjct: 164 VSSLGMDCNEFV-ASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS 222

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKC--------------------------------LA 209
            +  F  M+   I+ ++ TF CVL                                  L+
Sbjct: 223 VIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLS 282

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           +     R  DA KLF  +S  D V+WNCMISGY+ +G+ E+ L  F EM++ G   D  T
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
             ++L   +    L + + +H + ++   S +I   + L+D Y KC  +  A  +F +  
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
              VV +T+MI+GY   G++  ++ +FR +V+  I P+   + SIL        L++G++
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE 462

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-------- 441
           +H +I +    +   +  A++DMYAKCG M  A  +F ++  +DIVSWN+MI        
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522

Query: 442 --GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              A+D+F  M +     D V+++  L ACA+L +   G+ IHG++++H +++D    + 
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSEST 582

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEP 557
           ++DMY KCG L  A ++F  +  K+++SW  +IA  G HG   D++  F++M  ++GI P
Sbjct: 583 LIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRP 642

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           D+++F+ ++ +C H G VDEG RFF  M  +  I+P+ EHYAC+VDL  R G L+EAY  
Sbjct: 643 DQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYET 702

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           ++ MP  PDA +WG+LL  CR+H  V+LAE  +  + +L+P N+GYYVL++N +A A +W
Sbjct: 703 VKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREW 762

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
           E V K+R  +  R ++K PG SWIEI  + ++FV+G  +HP +  I SLL  L  E++ E
Sbjct: 763 ESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLE 822

Query: 738 GYFPKTRYAL 747
           GY P+    L
Sbjct: 823 GYIPQPYLPL 832



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 164/642 (25%), Positives = 297/642 (46%), Gaps = 51/642 (7%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID-- 159
           +LQ C++   L  GK+VH+ +  + I   D     +++ M+  CG   +  ++F ++D  
Sbjct: 41  LLQACSNPNLLRQGKQVHAFLIVNSIS-GDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR---- 215
              +  WN ++  + + G   ++L  + KM   G++ D  TF C++K    + N +    
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159

Query: 216 ----------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
                                       ++    KLFD +  +D V WN M++GY   G 
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
            +  ++ F  M     + +  T   VLS CA+   +  G  +H   + +    E S  N+
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           LL MYSKCG  D A ++F  M     V+W  MI+GY + G+ + ++  F  M+  G+ PD
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
               +S+L + +    LE  K +H YI  + +   +++++AL+D Y KC  ++ A+++F+
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399

Query: 428 QMPVKDIVSWNTMIGAL---DLFVAMLQNFE--------PDGVTMACILPACASLAALER 476
           Q    D+V +  MI       L++  L+ F         P+ +T+  ILP    L AL+ 
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           GRE+HG+I++ G     N+  A++DMY KCG + LA  +F+ +  +D++SW  MI     
Sbjct: 460 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQ 519

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
                 AI  F  M  +GI  D VS  + L AC++      G      M  + ++   + 
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM-IKHSLASDVY 578

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE- 655
             + ++D+ ++ GNL  A    + M    +   W S++  C  H ++K +  +   + E 
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637

Query: 656 --LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
             + PD   +  ++++     +  E V+  R      G++  
Sbjct: 638 SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQ 679



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 156/345 (45%), Gaps = 34/345 (9%)

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           ++ +L AC+   LL  GK VH ++  N +    Y    ++ MYA CGS +D   +F ++ 
Sbjct: 38  LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97

Query: 431 VK--DIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERG 477
           ++   I  WN++I           AL  +  ML     PD  T  C++ AC +L   +  
Sbjct: 98  LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
             +   +   G+  +  VA++++  Y++ G + +   LFD +  KD + W +M+ GY   
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM-----MRYECNIE 592
           G     I  F+ MR   I P+ V+F  VL  C+   L+D G +   +     + +E +I+
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
             L      + + S+ G   +A +   MM  A D   W  ++ G   + +  L E+    
Sbjct: 278 NSL------LSMYSKCGRFDDASKLFRMMSRA-DTVTWNCMISG---YVQSGLMEESLTF 327

Query: 653 VFEL-----EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
            +E+      PD   +  LL +V ++ E  E  K++   I R  +
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSV-SKFENLEYCKQIHCYIMRHSI 371


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/733 (31%), Positives = 395/733 (53%), Gaps = 47/733 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  +C+ G  ++++++     +  +  D  T+  +L+ C+ L+ L  G +VH++ 
Sbjct: 116 SWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALA 175

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G+ ID    GS LV M+  C  L +    F  +       W   +    +   +   
Sbjct: 176 VKTGLEIDVRT-GSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRG 234

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS---- 214
           L LF +MQ LG+     +++   +  A                        VVG +    
Sbjct: 235 LELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDV 294

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 + DA + F  L +  V + N M+ G +  G+  + + +F+ M+      D+ ++
Sbjct: 295 YAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 354

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             V S CA       G+ VH  A+K+ F  +I  NN +LD+Y KC  L  A  +F+ M +
Sbjct: 355 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 414

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +  VSW ++IA   + G +D  I  F  M+R G++PD +   S+L ACA    LE G  V
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL---- 446
           HD + ++ + S  +V++ ++DMY KCG + +A+ + +++  + +VSWN ++    L    
Sbjct: 475 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKES 534

Query: 447 ------FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
                 F  ML    +PD  T A +L  CA+LA +E G++IHG I++  +  D  +++ +
Sbjct: 535 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTL 594

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY KCG +  +  +F+ +  +D +SW  MI GY +HG G +A+  F  M++  + P+ 
Sbjct: 595 VDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNH 654

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            +F++VL ACSH GL D+G R+F++M     +EP+LEH+ACMVD+L R+    EA +FI 
Sbjct: 655 ATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFIN 714

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP   DA IW +LL  C+I  +V++AE  A +V  L+PD++  Y+LL+NVYAE+ KW +
Sbjct: 715 SMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWAD 774

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V + R  + +  LKK PGCSWIE++ +++ F+ G  +HP + ++  +L  L  EMK  GY
Sbjct: 775 VSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGY 834

Query: 740 FPKTRYALINADE 752
            P +  + +  DE
Sbjct: 835 EPDSA-SFVEVDE 846



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 274/553 (49%), Gaps = 45/553 (8%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D V  + ++  +   GD+     +F+ + +  V  WN L+  Y + G F+ES+ LF +M 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141

Query: 191 SLGIAADSYTFSCVLK---------------CLAV-----------------VGNSRRVK 218
             G++ D  TF+ +LK                LAV                  G  R + 
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           DA   F  + +R+ VSW   I+G + N    +GLE+F EM  LG  V   +  +    CA
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
               L  GR +HA A+K  FS +      ++D+Y+K   L  A R F  +   +V +  +
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           M+ G  R G+   A+ LF+ M+R  I  DV +++ +  ACA       G+ VH    ++ 
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL----------FV 448
               + V+NA++D+Y KC ++ +A  +F  M  KD VSWN +I AL+           F 
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441

Query: 449 AMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            ML+   +PD  T   +L ACA+L +LE G  +H  +++ G+ +D  VA+ +VDMY KCG
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 501

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
           ++  A+ L D I  + ++SW  +++G+ ++    +A   F++M   G++PD  +F +VL 
Sbjct: 502 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 561

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
            C++   ++ G +    +  +  ++ +    + +VD+ ++ G++ ++    E +    D 
Sbjct: 562 TCANLATIELGKQIHGQIIKQEMLDDEYIS-STLVDMYAKCGDMPDSLLVFEKVE-KRDF 619

Query: 628 TIWGSLLCGCRIH 640
             W +++CG  +H
Sbjct: 620 VSWNAMICGYALH 632



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 255/521 (48%), Gaps = 30/521 (5%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL 223
           F+ N L+  Y++      +  +F  M       D+ +++ +L   +  G+   +  A  L
Sbjct: 53  FVSNCLLQMYARCAGAACARRVFDAMPR----RDTVSWNTMLTAYSHAGD---ISTAVAL 105

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           FD + D DVVSWN ++SGY   G+ ++ +++F EM   G + D  T   +L  C+    L
Sbjct: 106 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 165

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G  VHA A+K     ++   + L+DMY KC  LD A+  F  M ER+ VSW + IAG 
Sbjct: 166 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 225

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
            +   +   + LF  M R G+     +  S   +CA    L  G+ +H +  +N   S  
Sbjct: 226 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 285

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM----------IGALDLFVAMLQ- 452
            V  A++D+YAK  S+ DA   F  +P   + + N M          I A+ LF  M++ 
Sbjct: 286 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRS 345

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
           +   D V+++ +  ACA      +G+++H   ++ G   D  V NA++D+Y KC  L+ A
Sbjct: 346 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 405

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +F  +  KD +SW  +IA    +G   D I  FN+M + G++PD+ ++ SVL AC+  
Sbjct: 406 YLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAAL 465

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYA----CMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
             ++ G     +M ++  I+  L   A     +VD+  + G + EA +  + +       
Sbjct: 466 RSLEYG-----LMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG-GQQVV 519

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL 667
            W ++L G  ++ E + A+K    + +  L+PD+  +  +L
Sbjct: 520 SWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 560


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/733 (31%), Positives = 395/733 (53%), Gaps = 47/733 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  +C+ G  ++++++     +  +  D  T+  +L+ C+ L+ L  G +VH++ 
Sbjct: 158 SWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALA 217

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G+ ID    GS LV M+  C  L +    F  +       W   +    +   +   
Sbjct: 218 VKTGLEIDVRT-GSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRG 276

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS---- 214
           L LF +MQ LG+     +++   +  A                        VVG +    
Sbjct: 277 LELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDV 336

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 + DA + F  L +  V + N M+ G +  G+  + + +F+ M+      D+ ++
Sbjct: 337 YAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 396

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             V S CA       G+ VH  A+K+ F  +I  NN +LD+Y KC  L  A  +F+ M +
Sbjct: 397 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 456

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +  VSW ++IA   + G +D  I  F  M+R G++PD +   S+L ACA    LE G  V
Sbjct: 457 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 516

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL---- 446
           HD + ++ + S  +V++ ++DMY KCG + +A+ + +++  + +VSWN ++    L    
Sbjct: 517 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKES 576

Query: 447 ------FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
                 F  ML    +PD  T A +L  CA+LA +E G++IHG I++  +  D  +++ +
Sbjct: 577 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTL 636

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY KCG +  +  +F+ +  +D +SW  MI GY +HG G +A+  F  M++  + P+ 
Sbjct: 637 VDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNH 696

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            +F++VL ACSH GL D+G R+F++M     +EP+LEH+ACMVD+L R+    EA +FI 
Sbjct: 697 ATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFIN 756

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP   DA IW +LL  C+I  +V++AE  A +V  L+PD++  Y+LL+NVYAE+ KW +
Sbjct: 757 SMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWAD 816

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V + R  + +  LKK PGCSWIE++ +++ F+ G  +HP + ++  +L  L  EMK  GY
Sbjct: 817 VSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGY 876

Query: 740 FPKTRYALINADE 752
            P +  + +  DE
Sbjct: 877 EPDSA-SFVEVDE 888



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 274/553 (49%), Gaps = 45/553 (8%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D V  + ++  +   GD+     +F+ + +  V  WN L+  Y + G F+ES+ LF +M 
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183

Query: 191 SLGIAADSYTFSCVLK---------------CLAV-----------------VGNSRRVK 218
             G++ D  TF+ +LK                LAV                  G  R + 
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           DA   F  + +R+ VSW   I+G + N    +GLE+F EM  LG  V   +  +    CA
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
               L  GR +HA A+K  FS +      ++D+Y+K   L  A R F  +   +V +  +
Sbjct: 304 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 363

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           M+ G  R G+   A+ LF+ M+R  I  DV +++ +  ACA       G+ VH    ++ 
Sbjct: 364 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 423

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL----------FV 448
               + V+NA++D+Y KC ++ +A  +F  M  KD VSWN +I AL+           F 
Sbjct: 424 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 483

Query: 449 AMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            ML+   +PD  T   +L ACA+L +LE G  +H  +++ G+ +D  VA+ +VDMY KCG
Sbjct: 484 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 543

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
           ++  A+ L D I  + ++SW  +++G+ ++    +A   F++M   G++PD  +F +VL 
Sbjct: 544 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 603

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
            C++   ++ G +    +  +  ++ +    + +VD+ ++ G++ ++    E +    D 
Sbjct: 604 TCANLATIELGKQIHGQIIKQEMLDDEYIS-STLVDMYAKCGDMPDSLLVFEKVE-KRDF 661

Query: 628 TIWGSLLCGCRIH 640
             W +++CG  +H
Sbjct: 662 VSWNAMICGYALH 674



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 255/521 (48%), Gaps = 30/521 (5%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL 223
           F+ N L+  Y++      +  +F  M       D+ +++ +L   +  G+   +  A  L
Sbjct: 95  FVSNCLLQMYARCAGAACARRVFDAMPR----RDTVSWNTMLTAYSHAGD---ISTAVAL 147

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           FD + D DVVSWN ++SGY   G+ ++ +++F EM   G + D  T   +L  C+    L
Sbjct: 148 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 207

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G  VHA A+K     ++   + L+DMY KC  LD A+  F  M ER+ VSW + IAG 
Sbjct: 208 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 267

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
            +   +   + LF  M R G+     +  S   +CA    L  G+ +H +  +N   S  
Sbjct: 268 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 327

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM----------IGALDLFVAMLQ- 452
            V  A++D+YAK  S+ DA   F  +P   + + N M          I A+ LF  M++ 
Sbjct: 328 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRS 387

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
           +   D V+++ +  ACA      +G+++H   ++ G   D  V NA++D+Y KC  L+ A
Sbjct: 388 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 447

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +F  +  KD +SW  +IA    +G   D I  FN+M + G++PD+ ++ SVL AC+  
Sbjct: 448 YLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAAL 507

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYA----CMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
             ++ G     +M ++  I+  L   A     +VD+  + G + EA +  + +       
Sbjct: 508 RSLEYG-----LMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG-GQQVV 561

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLL 667
            W ++L G  ++ E + A+K    + +  L+PD+  +  +L
Sbjct: 562 SWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 602


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/699 (35%), Positives = 388/699 (55%), Gaps = 35/699 (5%)

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
            G+++  R  F  +       +N L+  Y +      +L LF++M S  +A    +++ +
Sbjct: 30  AGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA----SYNAL 85

Query: 205 LKCLAVVGNSRRVKDAHKLFDELS-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
           +  L++    + + DA      +     VVS+  ++ GY+ +G+    + +F++M     
Sbjct: 86  ISGLSL--RRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER-- 141

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             +  +   +L G  + G +   R +          +++     +L  Y + G +  A  
Sbjct: 142 --NHVSYTVLLGGLLDAGRVNEARRL----FDEMPDRDVVAWTAMLSGYCQAGRITEARA 195

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           +F++M +R+VVSWT+MI+GYA+ G  + A +LF  M     E +  + T++L      G 
Sbjct: 196 LFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLVGYIQAGH 251

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
           +E   ++ + + E+ + +     NA+M  + + G +  A++VF +M  +D  +W+ MI A
Sbjct: 252 VEDAAELFNAMPEHPVAAC----NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKA 307

Query: 444 ----------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                     L  F  ML +   P+  ++  IL  CA+LA L+ GRE+H  +LR     D
Sbjct: 308 YEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMD 367

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
               +A++ MY+KCG L  A+ +F     KD++ W  MI GY  HG G  A+  F+DMR 
Sbjct: 368 VFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRL 427

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
           AG+ PD +++I  L ACS++G V EG   FN M    +I P  EHY+CMVDLL R+G + 
Sbjct: 428 AGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVE 487

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           EA+  I+ MPV PDA IWG+L+  CR+H   ++AE  A+ + ELEP N G YVLL+++Y 
Sbjct: 488 EAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYT 547

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS-SHPHAKKIESLLKRLR 731
              +WE+  K+R+ IS R L K+PGCSWIE   +V++F +G   +HP    I  +L++L 
Sbjct: 548 SVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLD 607

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
             +   GY     + L + DE +K  +L  HSE+ A+A+G+L +P G  IRV KNLRVCG
Sbjct: 608 GLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCG 667

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH   K ++K   REI+LRD+NRFHHFKDG CSCR +W
Sbjct: 668 DCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 172/380 (45%), Gaps = 47/380 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICES 125
           + A +  +C+ G + +A  +    E  K +  ++ +++   A    +   +K+  ++ E 
Sbjct: 177 WTAMLSGYCQAGRITEARALF--DEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER 234

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
                + V  + ++  ++  G +++   +FN +    V   N +M  + + G        
Sbjct: 235 -----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRG-------- 281

Query: 186 FKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                                          V  A  +F+++ +RD  +W+ MI  Y  N
Sbjct: 282 ------------------------------MVDAAKTVFEKMCERDDGTWSAMIKAYEQN 311

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
               + L  F+EML  G   +  +++++L+ CA    L +GR VHA  L+  F  ++   
Sbjct: 312 EFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAV 371

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           + L+ MY KCG+LD A RVF     + +V W SMI GYA+ G+ + A+ +F  M   G+ 
Sbjct: 372 SALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAES 424
           PD       L AC+  G ++ G+++ + +  N  ++      + ++D+  + G + +A  
Sbjct: 432 PDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFD 491

Query: 425 VFNQMPVK-DIVSWNTMIGA 443
           +   MPV+ D V W  ++GA
Sbjct: 492 LIKNMPVEPDAVIWGALMGA 511



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 166/401 (41%), Gaps = 75/401 (18%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI- 364
           N  +   ++ G+++GA   FE M  R+  S+ +++AGY R  + D A+ LFR M    + 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 365 ----------------------------EPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
                                        P V + TS+L      GLL     +   + E
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 397 NDMQSSLYVSNALMDM---------------------------YAKCGSMADAESVFNQM 429
            +  S   +   L+D                            Y + G + +A ++F++M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGRE 479
           P +++VSW  MI           A  LF  M +  E   V+   +L        +E   E
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNE---VSWTAMLVGYIQAGHVEDAAE 257

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +   +  H ++A     NA++  + + G++  A+++F+ +  +D  +W+ MI  Y  + F
Sbjct: 258 LFNAMPEHPVAA----CNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEF 313

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
             +A++TF +M   G+ P+  S IS+L  C+   ++D G R  +     C+ +  +   +
Sbjct: 314 LMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYG-REVHAAMLRCSFDMDVFAVS 372

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
            ++ +  + GNL +A R         D  +W S++ G   H
Sbjct: 373 ALITMYIKCGNLDKAKRVFHTFE-PKDIVMWNSMITGYAQH 412



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 137/328 (41%), Gaps = 55/328 (16%)

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLF--------- 447
           NA +   A+ G++  A + F  MP++   S+N ++           AL LF         
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 448 --------VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD------- 492
                   +++ +   PD       +P   S+ +      + GY+ RHG+ AD       
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFT--SLLRGYV-RHGLLADAIRLFQQ 137

Query: 493 ---RNVANAIVDM--YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
              RN  +  V +   +  G +  AR LFD +P +D+++WT M++GY   G   +A A F
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALF 197

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
           ++M +  +    VS+ +++   + +G V+   + F +M     +      +  M+    +
Sbjct: 198 DEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVS-----WTAMLVGYIQ 248

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            G++ +A      MP  P A    +++ G      V  A+ V E + E    + G +  +
Sbjct: 249 AGHVEDAAELFNAMPEHPVAAC-NAMMVGFGQRGMVDAAKTVFEKMCE---RDDGTWSAM 304

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKN 695
              Y + E   E      ++  RG++ N
Sbjct: 305 IKAYEQNEFLMEALSTFREMLWRGVRPN 332


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/565 (38%), Positives = 347/565 (61%), Gaps = 24/565 (4%)

Query: 287 RAVHAFALK-------ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTS 338
           R +HAF+++       A   K + F   L+ + S    +  A +VF K+ +  +V  W +
Sbjct: 34  RQIHAFSIRNGVSISDAELGKHLIF--YLVSLPSP-PPMSYAHKVFSKIEKPINVFIWNT 90

Query: 339 MIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           +I GYA  G    A+ L+R M   G +EPD +    +L A      + +G+ +H  +  +
Sbjct: 91  LIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRS 150

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
              S +YV N+L+ +YA CG +A A  VF++MP KD+V+WN++I           AL L+
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210

Query: 448 VAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M L+  +PDG T+  +L ACA + AL  G+  H Y+++ G++ + + +N ++D+Y +C
Sbjct: 211 TEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARC 270

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR-QAGIEPDEVSFISV 565
           G +  A++LFD +  K+ +SWT +I G  ++G G +AI  F +M  + G+ P E++F+ +
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGI 330

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           LYACSH G+V EG+ +F  M  E  IEP++EH+ CMVDLL+R G + +AY +I  MP+ P
Sbjct: 331 LYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQP 390

Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
           +  IW +LL  C +H +  LAE     + +LEP+++G YVLL+N+YA  ++W +V+K+R+
Sbjct: 391 NVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRK 450

Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
           ++ R G++K PG S +E+  +V+ F+ G  SHP    I + LK +   ++ EGY P+   
Sbjct: 451 QMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISN 510

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
             ++ +E EKE AL  HSEK+A+AF +++ P    IRV KNL+VC DCH   K +SK   
Sbjct: 511 VYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYN 570

Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
           REIV+RD +RFHHFK+G CSC+ +W
Sbjct: 571 REIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 201/375 (53%), Gaps = 40/375 (10%)

Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD---LKEGRRVFNKIDNG-KVF 164
           + SL   +++H+    +G+ I D  LG  L+F  V+      +    +VF+KI+    VF
Sbjct: 27  VSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVF 86

Query: 165 IWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSR-------- 215
           IWN L+  Y++ GN   ++ L+++M++ G +  D++T+  +LK +  + + R        
Sbjct: 87  IWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSV 146

Query: 216 ------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
                                    V  A+K+FD++ ++D+V+WN +I+G+  NG  E+ 
Sbjct: 147 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 206

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           L ++ EM   G   D  T+V++LS CA  GAL  G+  H + +K   ++ +  +N LLD+
Sbjct: 207 LALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDL 266

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGIEPDVYA 370
           Y++CG ++ A  +F++M +++ VSWTS+I G A  G+   AI LF+ M  +EG+ P    
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEIT 326

Query: 371 ITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
              IL+AC+  G+++ G +    + E   ++  +     ++D+ A+ G +  A     +M
Sbjct: 327 FVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKM 386

Query: 430 PVK-DIVSWNTMIGA 443
           P++ ++V W T++GA
Sbjct: 387 PMQPNVVIWRTLLGA 401



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 189/371 (50%), Gaps = 27/371 (7%)

Query: 220 AHKLFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF-NVDLATMVTVLSGC 277
           AHK+F ++    +V  WN +I GY   G +   + +++EM   GF   D  T   +L   
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAV 131

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
                +  G  +H+  +++ F   I   N+LL +Y+ CGD+  A +VF+KM E+ +V+W 
Sbjct: 132 GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           S+I G+A  G  + A+ L+  M  +GI+PD + I S+L ACA  G L +GK  H Y+ + 
Sbjct: 192 SVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKV 251

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL------FVAML 451
            +  +L+ SN L+D+YA+CG + +A+++F++M  K+ VSW ++I  L +       + + 
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELF 311

Query: 452 QNFE------PDGVTMACILPACASLAALERGREIHGYILR----HGISADRNVANAIVD 501
           +N E      P  +T   IL AC+    ++ G E   Y  R    + I         +VD
Sbjct: 312 KNMESKEGLLPCEITFVGILYACSHCGMVKEGFE---YFRRMSEEYKIEPRIEHFGCMVD 368

Query: 502 MYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD-- 558
           +  + G +  A      +P + +++ W  ++    +H  G   +A    M+   +EP+  
Sbjct: 369 LLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVH--GDSDLAELARMKILQLEPNHS 426

Query: 559 -EVSFISVLYA 568
            +   +S +YA
Sbjct: 427 GDYVLLSNMYA 437



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 194/461 (42%), Gaps = 97/461 (21%)

Query: 31  PSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSE 90
           PS  P+  + K  S     PI+  I  TL+   + Y AEIG      +L + M    +S 
Sbjct: 64  PSPPPMSYAHKVFSKIE-KPINVFIWNTLI---RGY-AEIGNSVSAVSLYREMR---ASG 115

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
             + DT TY  +L+    +  +  G+ +HS++  SG      V  S L+ ++  CGD+  
Sbjct: 116 FVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNS-LLHLYANCGDVAS 174

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
             +VF+K+    +  WN +++ +++ G  +E+L L+ +M   GI  D +T   +L   A 
Sbjct: 175 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAK 234

Query: 211 VG--------------------------------NSRRVKDAHKLFDELSDRDVVSWNCM 238
           +G                                   RV++A  LFDE+ D++ VSW  +
Sbjct: 235 IGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 294

Query: 239 ISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGAL-----MFGRAVHAF 292
           I G   NG+ ++ +E+FK M +  G      T V +L  C++CG +      F R    +
Sbjct: 295 IVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEY 354

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDG 351
            ++      I     ++D+ ++ G +  A     KM  + +VV W +++      G  D 
Sbjct: 355 KIEP----RIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDL 410

Query: 352 AIRLFRGMVREGIEP----------DVYA-------ITSILHACACDG--------LLEI 386
           A  L R  + + +EP          ++YA       +  I      DG        L+E+
Sbjct: 411 A-ELARMKILQ-LEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEV 468

Query: 387 GKDVHDYI------KENDMQSSLYVSNALMDMYAKCGSMAD 421
           G  VH+++       +NDM            +YAK   M D
Sbjct: 469 GNRVHEFLMGDKSHPQNDM------------IYAKLKEMTD 497



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 36/209 (17%)

Query: 451 LQNFEPDGVTMACILPACASL------AALERGREIHGYILRHGIS-ADRNVANAIVDMY 503
           +  F    V +  ++  C +L      ++L + R+IH + +R+G+S +D  +   ++   
Sbjct: 1   MSPFSETSVLLLPMVEKCINLLQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYL 60

Query: 504 VKC---GVLVLARSLFDMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-IEPD 558
           V       +  A  +F  I    ++  W  +I GY   G    A++ + +MR +G +EPD
Sbjct: 61  VSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPD 120

Query: 559 EVSFISVLYACS-----------HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
             ++  +L A             HS ++  G   F  + Y  N          ++ L + 
Sbjct: 121 THTYPFLLKAVGKMADVRLGETIHSVVIRSG---FGSLIYVQN---------SLLHLYAN 168

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            G+++ AY+  + MP   D   W S++ G
Sbjct: 169 CGDVASAYKVFDKMP-EKDLVAWNSVING 196


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/726 (35%), Positives = 387/726 (53%), Gaps = 57/726 (7%)

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFK-ESLYLFKKMQSLGIAADSYTFSCVLKCLA-- 209
           R+FN + N   F WN +M  +    N   ++L  +K   +     DSYT+  +L+C A  
Sbjct: 59  RIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAAR 118

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           V     R   AH +     D DV   N +++ Y   G       VF+E   L    DL +
Sbjct: 119 VSEFEGRQLHAHAVSSGF-DGDVYVRNTLMNLYAVCGSVGSARRVFEESPVL----DLVS 173

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE--K 327
             T+L+G    G +     V     +    +    +N+++ ++ + G ++ A R+F   +
Sbjct: 174 WNTLLAGYVQAGEVEEAERV----FEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVR 229

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
             ER +VSW++M++ Y +  + + A+ LF  M   G+  D   + S L AC+    +E+G
Sbjct: 230 GRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMG 289

Query: 388 KDVH---------DYIKENDMQSSLYVS-----------------------NALMDMYAK 415
           + VH         DY+   +    LY S                       N+++  Y +
Sbjct: 290 RWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLR 349

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACI 464
           CGS+ DAE +F  MP KD+VSW+ MI           AL LF  M L    PD   +   
Sbjct: 350 CGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSA 409

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           + AC  LA L+ G+ IH YI R+ +  +  ++  ++DMY+KCG +  A  +F  +  K +
Sbjct: 410 ISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGV 469

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
            +W  +I G  M+G    ++  F DM++ G  P+E++F+ VL AC H GLV++G  +FN 
Sbjct: 470 STWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNS 529

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVK 644
           M +E  IE  ++HY CMVDLL R G L EA   I+ MP+APD   WG+LL  CR H + +
Sbjct: 530 MIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNE 589

Query: 645 LAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIK 704
           + E++   + +L+PD+ G++VLL+N+YA    W  V ++R  +++ G+ K PGCS IE  
Sbjct: 590 MGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEAN 649

Query: 705 GKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSE 764
           G V+ F+AG  +HP    IE +L  +  ++K EGY P T    ++ DE EKE AL  HSE
Sbjct: 650 GTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSE 709

Query: 765 KLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRC 824
           KLA+AFG++ +     IRVTKNLR+C DCH + K +SK   R+IV+RD +RFHHFK G C
Sbjct: 710 KLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGAC 769

Query: 825 SCRGFW 830
           SC  FW
Sbjct: 770 SCMDFW 775



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 240/499 (48%), Gaps = 55/499 (11%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L+ +  +K D+ TY  +LQ CA   S  +G+++H+    SG    D  + + L+ ++  C
Sbjct: 95  LFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGF-DGDVYVRNTLMNLYAVC 153

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G +   RRVF +     +  WN L+  Y + G  +E+  +F+ M      A +       
Sbjct: 154 GSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASN------- 206

Query: 206 KCLAVVGNSRRVKDAHKLFDEL--SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
             +A+ G    V+ A ++F+ +   +RD+VSW+ M+S Y  N + E+ L +F EM   G 
Sbjct: 207 SMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGV 266

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
            VD   +V+ LS C+    +  GR VH  A+K      +S  N L+ +YS CG++  A R
Sbjct: 267 AVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARR 326

Query: 324 VFE--------------------------------KMGERSVVSWTSMIAGYAREGVFDG 351
           +F+                                 M E+ VVSW++MI+GYA+   F  
Sbjct: 327 IFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSE 386

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           A+ LF+ M   G+ PD  A+ S + AC     L++GK +H YI  N +Q ++ +S  L+D
Sbjct: 387 ALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLID 446

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFE-PDGVT 460
           MY KCG + +A  VF  M  K + +WN +I           +L++F  M +    P+ +T
Sbjct: 447 MYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEIT 506

Query: 461 MACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
              +L AC  +  +  GR   +  I  H I A+      +VD+  + G+L  A  L D +
Sbjct: 507 FMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSM 566

Query: 520 P-AKDLISWTIMIAGYGMH 537
           P A D+ +W  ++     H
Sbjct: 567 PMAPDVATWGALLGACRKH 585


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/538 (40%), Positives = 320/538 (59%), Gaps = 15/538 (2%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N L   Y K GDL GA ++F++M ER+V +W +M+AG    G  + ++  F  M REG+ 
Sbjct: 173 NILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMH 232

Query: 366 PDVYAITSILHACACDGLLEI--GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           PD + + S+   CA  GL ++  G+ VH Y+  + +   + V ++L  MY +CG + + E
Sbjct: 233 PDEFGLGSVFRCCA--GLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGE 290

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLA 472
           +V   +P   IVS NT+I          GAL+ F  M       D VT    + +C+ LA
Sbjct: 291 AVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLA 350

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           AL +G++IHG +++ G+     V   +V MY +CG L  +  +F      D    + MI+
Sbjct: 351 ALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMIS 410

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
            YG HG G  AI  F  M   G EP +V+F+++LYACSHSGL +EG   F +M     ++
Sbjct: 411 AYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQ 470

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P ++HY C+VDLL R+G L EA   I  MP+ PD  IW +LL  C+      +AE++A+ 
Sbjct: 471 PSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKR 530

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           V EL+P ++  YVLL+N+ A + +W +V ++R+ +    ++K PG SW+E+KG ++ F  
Sbjct: 531 VIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCT 590

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  SHP  K+I+  L+ +  ++++ GY P     L + ++ EKEV+L  HSEKLA+AF  
Sbjct: 591 GDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAF 650

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           L+LP G  IRV KNLRVC DCH   K MS+   REIV+RD +RFHHFKDGRCSCR +W
Sbjct: 651 LSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 202/477 (42%), Gaps = 55/477 (11%)

Query: 69  EIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIV 128
           E  R C  G L  A+   +         + +  + + C  L+ L   +++H+    SG  
Sbjct: 79  EFVRLCATGRLRDALRRPFRGVLWSDAARLFSHLFRACRALRPL---RQLHAFAATSGAA 135

Query: 129 IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
            D     + L+  +   GDL   R +F +I    V  WN+L   Y K G+          
Sbjct: 136 TDR-FTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGD---------- 184

Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                                 +G +R      KLFDE+ +R+V +WN M++G    G  
Sbjct: 185 ----------------------LGGAR------KLFDEMPERNVATWNAMVAGLTNLGFD 216

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           E+ L  F +M   G + D   + +V   CA    ++ GR VHA+ +++   +++   ++L
Sbjct: 217 EESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSL 276

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
             MY +CG L     V   +   S+VS  ++IAG  + G  +GA+  F  M   G+  DV
Sbjct: 277 AHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADV 336

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               S + +C+    L  G+ +H  + +  +   + V   L+ MY++CG + D+E VF  
Sbjct: 337 VTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFG 396

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG 477
               D    + MI           A++LF  M+    EP  VT   +L AC+     E G
Sbjct: 397 YCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEG 456

Query: 478 REIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIA 532
            +    + + +G+         +VD+  + G L  A +L   +P   D + W  +++
Sbjct: 457 MDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLS 513



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 178/406 (43%), Gaps = 39/406 (9%)

Query: 72  RFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDD 131
           R C      + +    ++  +  D  T   ++   ADL  L   +++   I    ++  +
Sbjct: 114 RACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWN 173

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
            + G      ++  GDL   R++F+++    V  WN ++   +  G  +ESL  F  M+ 
Sbjct: 174 ILFGG-----YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRR 228

Query: 192 LGIAADSYTFSCVLKCLA------------------------VVGNSRR--------VKD 219
            G+  D +    V +C A                         VG+S          +++
Sbjct: 229 EGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQE 288

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
              +   L    +VS N +I+G   NG +E  LE F  M ++G   D+ T V+ +S C++
Sbjct: 289 GEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSD 348

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             AL  G+ +H   +KA   K +     L+ MYS+CG L  + RVF           ++M
Sbjct: 349 LAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAM 408

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KEND 398
           I+ Y   G    AI LF+ M+  G EP      ++L+AC+  GL E G D  + + K   
Sbjct: 409 ISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYG 468

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
           MQ S+     ++D+  + G + +AE++   MP+  D V W T++ A
Sbjct: 469 MQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 514



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 36/144 (25%)

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           +  AC +L  L   R++H +    G + DR  AN ++  Y   G L  AR LF+ IP ++
Sbjct: 112 LFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 168

Query: 524 LISWTIMIAGY-----------------------------GMHGFGCD--AIATFNDMRQ 552
           ++SW I+  GY                             G+   G D  ++  F DMR+
Sbjct: 169 VMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRR 228

Query: 553 AGIEPDEVSFISVLYACSHSGLVD 576
            G+ PDE    SV   C  +GL D
Sbjct: 229 EGMHPDEFGLGSVFRCC--AGLRD 250


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/560 (39%), Positives = 322/560 (57%), Gaps = 42/560 (7%)

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           SK GDL+ A+ VF+K+       + ++  GY R  +    I ++  M+ + + P+ +   
Sbjct: 65  SKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYP 124

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
            ++ AC  D  +E GK +H ++ +    +  +  N L+ MY    S+  A  VF+ MP +
Sbjct: 125 PLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQR 184

Query: 433 DIVSWNTMIG-----------------------------------------ALDLFVAM- 450
           D+VSW ++I                                          A  LF  M 
Sbjct: 185 DVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMR 244

Query: 451 LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
           L+N   D    A +L AC  L ALE+G+ IHGYI + GI  D  +A  ++DMY KCG L 
Sbjct: 245 LENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLE 304

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            A  +F+ +P K + SW  MI G  MHG G  AI  F +M +  + PD ++F++VL AC+
Sbjct: 305 KASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACA 364

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
           HSGLV+EG  +F  M     ++P +EH+ CMVDLL R G L EA + I  MPV PDA + 
Sbjct: 365 HSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVL 424

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
           G+L+  CRIH   +L E++ + V ELEP N+G YVLLAN+YA A +WE+V K+R+ ++ R
Sbjct: 425 GALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDR 484

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           G+KK PG S IE +  V+ F+AGG +HP AK+I + L  +   ++  GY P T   L + 
Sbjct: 485 GVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDI 544

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           DE EKE  L  HSEKLA+AFG+L    G+T+R++KNLR+C DCH+ +K +SK   REI++
Sbjct: 545 DEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIII 604

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RD NRFHHF+ G CSC+ +W
Sbjct: 605 RDRNRFHHFRMGGCSCKDYW 624



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 174/372 (46%), Gaps = 44/372 (11%)

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
           LG++AD+     V+K  A+   S  +  A ++FD++   D   +N +  GY+   +A   
Sbjct: 46  LGLSADNDAMGRVIKFCAI-SKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNC 104

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           + ++  ML+   + +  T   ++  C    A+  G+ +HA  LK  F  +    N L+ M
Sbjct: 105 IFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHM 164

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA------------------- 352
           Y     L+ A RVF+ M +R VVSWTS+I GY++ G  D A                   
Sbjct: 165 YVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMI 224

Query: 353 ------------IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
                         LF  M  E +  D +   S+L AC   G LE GK +H YI+++ ++
Sbjct: 225 AAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIE 284

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM 450
               ++  ++DMY KCG +  A  VFN++P K I SWN MIG          A++LF  M
Sbjct: 285 LDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEM 344

Query: 451 LQNF-EPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGV 508
            +    PDG+T   +L ACA    +E G+    Y+    G+         +VD+  + G+
Sbjct: 345 EREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGL 404

Query: 509 LVLARSLFDMIP 520
           L  AR L + +P
Sbjct: 405 LEEARKLINEMP 416



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 41/348 (11%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           TY  +++ C    ++E+GK++H+ + + G   D G   + L+ M+V    L++ RRVF+ 
Sbjct: 122 TYPPLIRACCIDYAIEEGKQIHAHVLKFGFGAD-GFSLNNLIHMYVNFQSLEQARRVFDN 180

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +    V  W  L+  YS+ G                                       V
Sbjct: 181 MPQRDVVSWTSLITGYSQWG--------------------------------------FV 202

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
             A ++F+ + +R+ VSWN MI+ Y+ +    +   +F  M      +D     ++LS C
Sbjct: 203 DKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSAC 262

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
              GAL  G+ +H +  K+    +     T++DMY KCG L+ A  VF ++ ++ + SW 
Sbjct: 263 TGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWN 322

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
            MI G A  G  + AI LF+ M RE + PD     ++L ACA  GL+E GK    Y+ E 
Sbjct: 323 CMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEV 382

Query: 398 -DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
             ++  +     ++D+  + G + +A  + N+MPV  D      ++GA
Sbjct: 383 LGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGA 430



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 25/281 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + +   L +A  +      E   +D     S+L  C  L +LE GK +H  I
Sbjct: 219 SWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYI 278

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +SGI +D   L + ++ M+  CG L++   VFN++    +  WN ++   +  G  + +
Sbjct: 279 EKSGIELDSK-LATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAA 337

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-----RDVVSWNC 237
           + LFK+M+   +A D  TF  VL   A   +S  V++    F  +++       +  + C
Sbjct: 338 IELFKEMEREMVAPDGITFVNVLSACA---HSGLVEEGKHYFQYMTEVLGLKPGMEHFGC 394

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+      G+ E+  ++  EM     N D   +  ++  C   G    G  +    +   
Sbjct: 395 MVDLLGRAGLLEEARKLINEM---PVNPDAGVLGALVGACRIHGNTELGEQIGKKVI--- 448

Query: 298 FSKEISFNNT-----LLDMYSKCGDLDGAIRVFEKMGERSV 333
              E+  +N+     L ++Y+  G  +   +V + M +R V
Sbjct: 449 ---ELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGV 486


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 270/825 (32%), Positives = 409/825 (49%), Gaps = 76/825 (9%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQ-LCADLKSLEDGKKVHSI 121
            ++NA I    E G    AM +      E  + ++ T  +IL  L A        +K H  
Sbjct: 301  SWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGR 360

Query: 122  ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID-NGKVFIWNLLMHEYSKTGNFK 180
            I ESG  + D V+G+ ++ M+  CG       VF +I     V  WN ++       +F 
Sbjct: 361  IWESG-YLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFG 419

Query: 181  ESLYLFKKMQSLGIAADSYTFSCVL-------------KCLAVVGNSRR----------- 216
            + +  F  M   GI  +  +F  +L             K  +++   RR           
Sbjct: 420  KVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATML 479

Query: 217  ---------VKDAHKLFDE--LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                     + +A  +F E  L  R +V+WN M+  Y  N  +++      EML  G   
Sbjct: 480  VSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLP 539

Query: 266  DLATMVTVLSGCANCGALMFGRAVHAFALKACF----SKEISFNNTLLDMYSKCGDLDGA 321
            D  +  +VLS C  C       +  A  L+ C      +       L+ M+ +C +L+ A
Sbjct: 540  DALSFTSVLSSC-YC-------SQEAQVLRMCILESGYRSACLETALISMHGRCRELEQA 591

Query: 322  IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
              VF++M    VVSWT+M++  A    F     LFR M  EG+ PD + + + L  C   
Sbjct: 592  RSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDS 651

Query: 382  GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
              L +GK +H  + E  +++ + V NAL++MY+ CG   +A S F  M  +D+VSWN M 
Sbjct: 652  TTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMS 711

Query: 442  GA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
             A          + LF  M L+  +PD +T +  L      A +  G+  HG     G+ 
Sbjct: 712  AAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLD 771

Query: 491  ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI-----MIAGYGMHGFGCDAIA 545
            +D +VA  +V +Y KCG L  A SLF     +    WT+     +I     HGF  +A+ 
Sbjct: 772  SDVSVATGLVKLYAKCGKLDEAISLF-----RGACQWTVVLLNAIIGALAQHGFSEEAVK 826

Query: 546  TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLL 605
             F  M+Q G+ PD  + +S++ AC H+G+V+EG   F  M+    I P LEHYAC VDLL
Sbjct: 827  MFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLL 886

Query: 606  SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV 665
             R G L  A + I  MP   +  +W SLL  C++  + +L E+ A+ + EL+P N+  +V
Sbjct: 887  GRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHV 946

Query: 666  LLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIES 725
            +L+N+Y    KW++    R+K+  + +K  PG SW+EI  +V+ FVAG  SHP   +I  
Sbjct: 947  VLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYV 1006

Query: 726  LLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTK 785
            +L +L L M+R GY  +    L   DE+ KE AL  HSE++A+AFG++  P   T+++ K
Sbjct: 1007 VLDKLELLMRRAGY--EADKGLDAEDEL-KEKALGYHSERIAIAFGLIATPPDTTLKIVK 1063

Query: 786  NLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            NLRVCGDCH   K++S    REI++RDS RFHHF +G CSC+  W
Sbjct: 1064 NLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 171/609 (28%), Positives = 273/609 (44%), Gaps = 104/609 (17%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D + Y ++LQ C D   L  GK+ H +I  +G+                           
Sbjct: 24  DLQEYTALLQSCVDSNDLAKGKRAHELIANAGL--------------------------- 56

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
                   +F+ N L++ Y + G+ +E                                 
Sbjct: 57  -----EQHLFLGNCLINMYVRCGSLEE--------------------------------- 78

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTV 273
                AH +F ++ +R+VVSW  +IS    +G   +   +F+ M L      +  T+V +
Sbjct: 79  -----AHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAM 133

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEIS----FNNTLLDMYSKCGDLDGAIRVFEKMG 329
           L+ CAN   L  GR++HA   +    +E +      N +++MY+KCG  + AI VF  + 
Sbjct: 134 LNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIP 193

Query: 330 ERSVVSWTSMIAGYAREGVF-DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
           E+ VVSWT+M   YA+E  F   A+R+FR M+ + + P+V    + L AC     L  G 
Sbjct: 194 EKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGT 250

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK---DIVSWNTMIG--- 442
            +H  + E  +       NAL++MY KCG    A  VF  M  +   D+VSWN MI    
Sbjct: 251 WLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASV 310

Query: 443 -------ALDLFVAM-LQNFEPDGVTMACILPA-CASLAALERGREIHGYILRHGISADR 493
                  A+ +F  + L+   P+ VT+  IL A  AS       R+ HG I   G   D 
Sbjct: 311 EAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDV 370

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMI-AGYGMHGFGCDAIATFNDMR 551
            V NAI+ MY KCG    A ++F  I  K D+ISW  M+ A      FG   + TF+ M 
Sbjct: 371 VVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFG-KVVNTFHHML 429

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM--RYECNIEPKLEHYACMVDLLSRTG 609
            AGI+P++VSFI++L ACS+S  +D G +  +++  R    +E  +     +V +  + G
Sbjct: 430 LAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVA--TMLVSMYGKCG 487

Query: 610 NLSEAYRFIEMMPVAPDATI-WGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVL 666
           +++EA    + MP+   + + W  +L     +   K A      + +  + PD   +  +
Sbjct: 488 SIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSV 547

Query: 667 LANVYAEAE 675
           L++ Y   E
Sbjct: 548 LSSCYCSQE 556



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 155/619 (25%), Positives = 289/619 (46%), Gaps = 67/619 (10%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           NA+ G F     L + M +L SS  +  ++ T  ++L  CA+ + L  G+ +H++I E G
Sbjct: 101 NAQSGAFARAFALFRTM-LLESS--AAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELG 157

Query: 127 IVIDDG---VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF-KES 182
           +  +     ++G+ ++ M+  CG  ++   VF  I    V  W  +   Y++   F  ++
Sbjct: 158 LERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDA 217

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC-----------------------------LAVVGN 213
           L +F++M    +A +  TF   L                               + + G 
Sbjct: 218 LRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGK 277

Query: 214 SRRVKDAHKLFDELSDR---DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
               + A+ +F  ++ R   D+VSWN MIS  +  G     + +F+ +   G   +  T+
Sbjct: 278 CGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTL 337

Query: 271 VTVLSGCANCGALMFG--RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           +T+L+  A  G + FG  R  H    ++ + +++   N ++ MY+KCG    A  VF ++
Sbjct: 338 ITILNALAASG-VDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRI 396

Query: 329 GER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
             +  V+SW +M+        F   +  F  M+  GI+P+  +  +IL+AC+    L+ G
Sbjct: 397 RWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFG 456

Query: 388 KDVHDYI---KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV--KDIVSWNTMIG 442
           + +H  I   + + ++SS  V+  L+ MY KCGS+A+AE VF +MP+  + +V+WN M+G
Sbjct: 457 RKIHSLILTRRRDYVESS--VATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLG 514

Query: 443 AL-------DLFVAMLQNFE----PDGVTMACILPACASLAALERGREIHGYILRHGISA 491
           A        + F A+++  +    PD ++   +L +C      +  + +   IL  G  +
Sbjct: 515 AYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---YCSQEAQVLRMCILESGYRS 571

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
              +  A++ M+ +C  L  ARS+FD +   D++SWT M++    +    +    F  M+
Sbjct: 572 -ACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQ 630

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
             G+ PD+ +  + L  C  S  +  G +  +    E  +E  +     ++++ S  G+ 
Sbjct: 631 LEGVIPDKFTLATTLDTCLDSTTLGLG-KIIHACVTEIGLEADIAVENALLNMYSNCGDW 689

Query: 612 SEAYRFIEMMPVAPDATIW 630
            EA  F E M  A D   W
Sbjct: 690 REALSFFETMK-ARDLVSW 707



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 234/523 (44%), Gaps = 45/523 (8%)

Query: 61  CKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKV 118
           C   ++N  +G   +  +  K +   +    + ID    ++ +IL  C++ ++L+ G+K+
Sbjct: 400 CDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKI 459

Query: 119 HSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK--IDNGKVFIWNLLMHEYSKT 176
           HS+I        +  + + LV M+  CG + E   VF +  + +  +  WN+++  Y++ 
Sbjct: 460 HSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQN 519

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLK-----------------------CLAVV-- 211
              KE+     +M   G+  D+ +F+ VL                        CL     
Sbjct: 520 DRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALI 579

Query: 212 ---GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
              G  R ++ A  +FDE+   DVVSW  M+S    N   ++   +F+ M   G   D  
Sbjct: 580 SMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKF 639

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+ T L  C +   L  G+ +HA   +     +I+  N LL+MYS CGD   A+  FE M
Sbjct: 640 TLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             R +VSW  M A YA+ G+   A+ LFR M  EG++PD    ++ L+      L+  GK
Sbjct: 700 KARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGK 759

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---- 444
             H    E+ + S + V+  L+ +YAKCG + +A S+F       +V  N +IGAL    
Sbjct: 760 LFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHG 819

Query: 445 ------DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVA 496
                  +F  M Q    PD  T+  I+ AC     +E G      +  + GIS      
Sbjct: 820 FSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHY 879

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKD-LISWTIMIAGYGMHG 538
              VD+  + G L  A  +   +P +D  + WT ++    + G
Sbjct: 880 ACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQG 922



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 137/281 (48%), Gaps = 21/281 (7%)

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
           G VR     D+   T++L +C     L  GK  H+ I    ++  L++ N L++MY +CG
Sbjct: 15  GAVRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCG 74

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML--QNFEPDGVTMACIL 465
           S+ +A ++F++M  +++VSW  +I           A  LF  ML   +  P+  T+  +L
Sbjct: 75  SLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAML 134

Query: 466 PACASLAALERGREIHGYILRHGISADRNVA----NAIVDMYVKCGVLVLARSLFDMIPA 521
            ACA+   L  GR IH  I   G+  +   A    NA+++MY KCG    A ++F  IP 
Sbjct: 135 NACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPE 194

Query: 522 KDLISWTIMIAGYGMH-GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
           KD++SWT M   Y     F  DA+  F +M    + P+ ++FI+ L AC  + L D  W 
Sbjct: 195 KDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC--TSLRDGTWL 252

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
              +       +P   +   ++++  + G+   AY   + M
Sbjct: 253 HSLLHEAGLGFDPLAGN--ALINMYGKCGDWEGAYGVFKAM 291


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/605 (36%), Positives = 340/605 (56%), Gaps = 44/605 (7%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V  L  CA   +   G+ +H   +K    +  S +N L++MY KCG +  A+ +F ++ 
Sbjct: 6   LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGK 388
            R  +SW S++    +  +    + +F  M ++ G++PD Y    ++ ACA  G ++ GK
Sbjct: 66  HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCG------------------------------- 417
            VH     + +     V ++L+DMYAKCG                               
Sbjct: 126 QVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSG 185

Query: 418 SMADAESVFNQMPVKDIVSWNTMIGAL-------DLFVAMLQNFEP-----DGVTMACIL 465
              DA  +F +MPVK+++SW  +I  L       D F   ++         D   ++ I+
Sbjct: 186 RKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSII 245

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
            A A+LA L  G++IH  ++  G  +   V+NA+VDMY KC  ++ A+ +F  +  +D++
Sbjct: 246 GASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIV 305

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           SWT +I G   HG   +A++ +N M   G++P+EV+F+ ++YACSH GLV +G  FFN M
Sbjct: 306 SWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSM 365

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
             +  I P L+HY C++DLLSR+G+L EA   I+ MP  PD   W +LL  C  H    +
Sbjct: 366 IKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLI 425

Query: 646 AEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
             +VA+H+  L+P++   Y+LL+N+YA A  WE V K+R  ++   +KK PG S I +  
Sbjct: 426 GIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGK 485

Query: 706 KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEK 765
           +  +F+AG +SHP  ++I  LL+ L  EMK+ GY P T   L + ++ EKE  L  HSE+
Sbjct: 486 ESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSER 545

Query: 766 LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCS 825
           LA+A+G+L    G  + + KNLRVCGDCH + KF+S   +REIV+RD+NR+HHFKDG+CS
Sbjct: 546 LAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCS 605

Query: 826 CRGFW 830
           C  FW
Sbjct: 606 CNNFW 610



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 178/361 (49%), Gaps = 42/361 (11%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           ++  +  + D   +  +++ CA L +++ GK+VH+    S  V DD V+ S LV M+  C
Sbjct: 95  MFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSP-VSDDDVVKSSLVDMYAKC 153

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G    GR VF+ I +     W  ++  Y+++G                            
Sbjct: 154 GLPDIGRVVFDSISSKNSISWTAMISGYAQSG---------------------------- 185

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN- 264
                     R  DA +LF ++  ++++SW  +ISG + +G       +F EM + G + 
Sbjct: 186 ----------RKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDI 235

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           VD   + +++   AN   L  G+ +H   +   +   +  +N L+DMY+KC D+  A ++
Sbjct: 236 VDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKI 295

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F +M +R +VSWTS+I G A+ G+ + A+ L+  M+  G++P+      +++AC+  GL+
Sbjct: 296 FGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLV 355

Query: 385 EIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIG 442
             G+   +  IK+  +  SL     L+D+ ++ G + +AE++   MP K D  +W  ++ 
Sbjct: 356 SKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLS 415

Query: 443 A 443
           A
Sbjct: 416 A 416



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 184/372 (49%), Gaps = 46/372 (12%)

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL-GFNVDLATM 270
           G    ++DA  LF++L  RD +SW  +++      +    L +F  M    G   D    
Sbjct: 49  GKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVF 108

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             ++  CA  GA+  G+ VHA  + +  S +    ++L+DMY+KCG  D    VF+ +  
Sbjct: 109 ACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISS 168

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFR---------------GMVR-------------- 361
           ++ +SWT+MI+GYA+ G    AI+LF+               G+V+              
Sbjct: 169 KNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEM 228

Query: 362 --EGIE-PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
             +GI+  D + ++SI+ A A   +L +GK +H  +     +SSL+VSNAL+DMYAKC  
Sbjct: 229 RSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSD 288

Query: 419 MADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPA 467
           +  A+ +F +M  +DIVSW ++I           AL L+  ML    +P+ VT   ++ A
Sbjct: 289 VLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYA 348

Query: 468 CASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLI 525
           C+ +  + +GR     +++ +GI+        ++D+  + G L  A +L   +P K D  
Sbjct: 349 CSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEA 408

Query: 526 SWTIMIAGYGMH 537
           +W  +++    H
Sbjct: 409 TWAALLSACNHH 420


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/538 (40%), Positives = 320/538 (59%), Gaps = 15/538 (2%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           N L   Y K GDL GA ++F++M ER+V +W +M+AG    G  + ++  F  M REG+ 
Sbjct: 111 NILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMH 170

Query: 366 PDVYAITSILHACACDGLLEI--GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           PD + + S+   CA  GL ++  G+ VH Y+  + +   + V ++L  MY +CG + + E
Sbjct: 171 PDEFGLGSVFRCCA--GLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGE 228

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLA 472
           +V   +P   IVS NT+I          GAL+ F  M       D VT    + +C+ LA
Sbjct: 229 AVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLA 288

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           AL +G++IHG +++ G+     V   +V MY +CG L  +  +F      D    + MI+
Sbjct: 289 ALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMIS 348

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
            YG HG G  AI  F  M   G EP +V+F+++LYACSHSGL +EG   F +M     ++
Sbjct: 349 AYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQ 408

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P ++HY C+VDLL R+G L EA   I  MP+ PD  IW +LL  C+      +AE++A+ 
Sbjct: 409 PSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKR 468

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           V EL+P ++  YVLL+N+ A + +W +V ++R+ +    ++K PG SW+E+KG ++ F  
Sbjct: 469 VIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCT 528

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  SHP  K+I+  L+ +  ++++ GY P     L + ++ EKEV+L  HSEKLA+AF  
Sbjct: 529 GDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAF 588

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           L+LP G  IRV KNLRVC DCH   K MS+   REIV+RD +RFHHFKDGRCSCR +W
Sbjct: 589 LSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 202/477 (42%), Gaps = 55/477 (11%)

Query: 69  EIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIV 128
           E  R C  G L  A+   +         + +  + + C  L+ L   +++H+    SG  
Sbjct: 17  EFVRLCATGRLRDALRRPFRGVLWSDAARLFSHLFRACRALRPL---RQLHAFAATSGAA 73

Query: 129 IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
            D     + L+  +   GDL   R +F +I    V  WN+L   Y K G+          
Sbjct: 74  TDR-FTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGD---------- 122

Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                                 +G +R      KLFDE+ +R+V +WN M++G    G  
Sbjct: 123 ----------------------LGGAR------KLFDEMPERNVATWNAMVAGLTNLGFD 154

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           E+ L  F +M   G + D   + +V   CA    ++ GR VHA+ +++   +++   ++L
Sbjct: 155 EESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSL 214

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
             MY +CG L     V   +   S+VS  ++IAG  + G  +GA+  F  M   G+  DV
Sbjct: 215 AHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADV 274

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               S + +C+    L  G+ +H  + +  +   + V   L+ MY++CG + D+E VF  
Sbjct: 275 VTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFG 334

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG 477
               D    + MI           A++LF  M+    EP  VT   +L AC+     E G
Sbjct: 335 YCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEG 394

Query: 478 REIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIA 532
            +    + + +G+         +VD+  + G L  A +L   +P   D + W  +++
Sbjct: 395 MDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLS 451



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 178/406 (43%), Gaps = 39/406 (9%)

Query: 72  RFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDD 131
           R C      + +    ++  +  D  T   ++   ADL  L   +++   I    ++  +
Sbjct: 52  RACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWN 111

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
            + G      ++  GDL   R++F+++    V  WN ++   +  G  +ESL  F  M+ 
Sbjct: 112 ILFGG-----YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRR 166

Query: 192 LGIAADSYTFSCVLKCLA------------------------VVGNSRR--------VKD 219
            G+  D +    V +C A                         VG+S          +++
Sbjct: 167 EGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQE 226

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
              +   L    +VS N +I+G   NG +E  LE F  M ++G   D+ T V+ +S C++
Sbjct: 227 GEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSD 286

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             AL  G+ +H   +KA   K +     L+ MYS+CG L  + RVF           ++M
Sbjct: 287 LAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAM 346

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KEND 398
           I+ Y   G    AI LF+ M+  G EP      ++L+AC+  GL E G D  + + K   
Sbjct: 347 ISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYG 406

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
           MQ S+     ++D+  + G + +AE++   MP+  D V W T++ A
Sbjct: 407 MQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 36/144 (25%)

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           +  AC +L  L   R++H +    G + DR  AN ++  Y   G L  AR LF+ IP ++
Sbjct: 50  LFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 106

Query: 524 LISWTIMIAGY-----------------------------GMHGFGCD--AIATFNDMRQ 552
           ++SW I+  GY                             G+   G D  ++  F DMR+
Sbjct: 107 VMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRR 166

Query: 553 AGIEPDEVSFISVLYACSHSGLVD 576
            G+ PDE    SV   C  +GL D
Sbjct: 167 EGMHPDEFGLGSVFRCC--AGLRD 188


>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 222/611 (36%), Positives = 352/611 (57%), Gaps = 45/611 (7%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           ++++  +  L  CA   +      +H+  +KA F K    +NTLLD+Y KCG +  A+++
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGIEPDVYAITSILHACACDGL 383
           F++M  R  VSW S++  + +  +    + +   M   +G++PD +    I+ AC+  G 
Sbjct: 61  FDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGY 120

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           L +GK VH     +       V ++L+DMY KCG   DA +VF+ +  K+ VSW +MI  
Sbjct: 121 LRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISG 180

Query: 443 ---------ALDLFV-AMLQNFEP--------------------------------DGVT 460
                    A+DLF+ A ++N                                   D + 
Sbjct: 181 YARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLV 240

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           ++ ++  CA+LA LE G++IHG ++  G  +   ++NA+VDMY KC  ++ A+ +F  +P
Sbjct: 241 LSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
            KD+ISWT +I G   HG   +A+  +++M  + I+P+EV+F+ +LYACSH+GLV  G  
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRE 360

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
            F  M  + +I P L+HY C++DLLSR+G+L EA   ++ +P  PD   W SLL  C  H
Sbjct: 361 LFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRH 420

Query: 641 HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSW 700
           + +++  ++A+ V +L+P++   Y+LL+NVYA AE W  V K+R+ +S   ++K PG S 
Sbjct: 421 NNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSS 480

Query: 701 IEIKGKVNIFVAGGS-SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
           I+      +F AG S  HP   +I +LLK L  EM++ GY P T + L + ++ EKE  L
Sbjct: 481 IDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQL 540

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
             HSE+LA+A+G+L    G  IR+ KNLR+CGDCH + KF+S   +REI++RD+ R+HHF
Sbjct: 541 FWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHF 600

Query: 820 KDGRCSCRGFW 830
           K+G+CSC  FW
Sbjct: 601 KEGKCSCNDFW 611



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 181/405 (44%), Gaps = 64/405 (15%)

Query: 83  MEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
           +  +++ +  + D   +  I++ C+ L  L  GK+VH+    S    DD V+ S L+ M+
Sbjct: 92  LNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLS-FFCDDEVVKSSLIDMY 150

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
             CG   + R VF+ I       W  ++  Y+++G                         
Sbjct: 151 TKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGR------------------------ 186

Query: 203 CVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
              KC           +A  LF +   R++ SW  +ISG I +G       +F EM   G
Sbjct: 187 ---KC-----------EAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREG 232

Query: 263 FN-VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
            + VD   + +V+ GCAN   L  G+ +H   +   F   +  +N L+DMY+KC D+  A
Sbjct: 233 IDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAA 292

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F +M  + V+SWTS+I G A+ G  + A+ L+  MV   I+P+      +L+AC+  
Sbjct: 293 KDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHA 352

Query: 382 GLLEIGKDV-HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
           GL+  G+++      +  +  SL     L+D+ ++ G + +AE++ +++P          
Sbjct: 353 GLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIP---------- 402

Query: 441 IGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYIL 485
                        F+PD  T A +L AC     LE G  I   +L
Sbjct: 403 -------------FKPDEPTWASLLSACMRHNNLEMGVRIADRVL 434


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 254/817 (31%), Positives = 421/817 (51%), Gaps = 83/817 (10%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           I+     ++L+L      ++  + +H+ I + G   +D  LG+ ++  ++  G + +   
Sbjct: 102 IEVDDLFNLLRLSVKYTDIDLARALHASILKLG---EDTHLGNAVIAAYIKLGLVVDAYE 158

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------ 207
           VF  +    V  ++ L+  +SK     E++ LF +M+  GI  + Y+F  +L        
Sbjct: 159 VFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLE 218

Query: 208 ---------LAV-VGNSRRV----------------KDAHKLFDELSDRDVVSWNCMISG 241
                    LA+ +G S+ V                  A  LFDE+  RD+ SWN MIS 
Sbjct: 219 LEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISS 278

Query: 242 YIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
            +     EK LE+F+ +  N GF  D  T+ T+L+ CA C A + GR +HA+A++     
Sbjct: 279 LVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLEN 338

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD---------- 350
            +S +N ++  Y++CG L+    +FE+M  R +++WT MI  Y   G+ D          
Sbjct: 339 NLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMP 398

Query: 351 ---------------------GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
                                 A+ LF  MV+EG E   + +T +++AC     LEI + 
Sbjct: 399 EKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQ 458

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK--DIVSWNTMI------ 441
           +H +I +   +S+  +  AL+DM +KCG M DA+ +F  +     + +   +MI      
Sbjct: 459 IHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARN 518

Query: 442 GALDLFVAMLQNFEPDG------VTMACILPACASLAALERGREIHGYILRHGISADRNV 495
           G  +  + +    + +G      V    IL  C +L   E G++IH   L+ G  A+  V
Sbjct: 519 GLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGV 578

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            N+I+ MY KC  +  A   F+ +P  D++SW  +IAG  +H  G +A+A ++ M +AGI
Sbjct: 579 GNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGI 638

Query: 556 EPDEVSFISVL--YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           +PD ++F+ ++  Y  + S L+DE    F  M+   ++EP  EHYA +V +L   G L E
Sbjct: 639 KPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEE 698

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A   I  MP  P+ ++W +LL GCR+H    + ++VA+H+  +EP +   YVL++N+YA 
Sbjct: 699 AEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPRDPSTYVLVSNLYAA 758

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
           + +W   + +RE +  RGL+K+P  SW+ IK +++ F A   SHP +  I S L  L L+
Sbjct: 759 SGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSGLDILILK 818

Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
             + GY P   + L   +E +K+  L  HS KLA  +G+L    G+ IRV KN+ +C DC
Sbjct: 819 CLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAKLAATYGLLKTRPGEPIRVVKNILLCRDC 878

Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           H   K+ +   +REI+ RD++ FH F +G+CSC+G+W
Sbjct: 879 HTFLKYATVVTQREIIFRDASGFHCFSNGQCSCKGYW 915



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 246/558 (44%), Gaps = 79/558 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAME---VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS- 120
           ++N  I    +  + EKA+E   VL  ++  K D  T  ++L  CA   +   G+++H+ 
Sbjct: 271 SWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAY 330

Query: 121 ---IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
              I  E+ + + + ++G      +  CG L     +F ++    +  W  ++  Y + G
Sbjct: 331 AIRIGLENNLSVSNAIIG-----FYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFG 385

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNC 237
                                      L  LAV            +F+++ +++ VS+N 
Sbjct: 386 ---------------------------LVDLAV-----------DMFNKMPEKNSVSYNA 407

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +++G+  N    K L +F  M+  G  +   T+  V++ C     L   R +H F +K  
Sbjct: 408 LLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFG 467

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKM---GERSVVSWTSMIAGYAREGVFDGAIR 354
           F         L+DM SKCG +D A R+F+ +   G  S++  TSMI GYAR G+ + AI 
Sbjct: 468 FRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQ-TSMICGYARNGLPEEAIC 526

Query: 355 LFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
           LF     EG +  D  A TSIL  C   G  E+GK +H    +    + L V N+++ MY
Sbjct: 527 LFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMY 586

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMA 462
           +KC ++ DA   FN MP  D+VSWN +I           AL ++ +M +   +PD +T  
Sbjct: 587 SKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFV 646

Query: 463 CILPA--CASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
            I+ A    S   L+  R +   + + H +        ++V +    G+L  A  L + +
Sbjct: 647 LIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKM 706

Query: 520 PAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS---FISVLYACSH---- 571
           P    +S W  ++ G  +H     +I         G+EP + S    +S LYA S     
Sbjct: 707 PFDPEVSVWRALLDGCRLH--ANTSIGKRVAKHIIGMEPRDPSTYVLVSNLYAASGRWHC 764

Query: 572 SGLVDEGWRFFNMMRYEC 589
           S +V E  R   + ++ C
Sbjct: 765 SEMVRENMRDRGLRKHPC 782


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/587 (39%), Positives = 358/587 (60%), Gaps = 12/587 (2%)

Query: 256 KEMLNLGFN-VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
           KE++ +G     ++ +  +L   A   A + G A HA  ++     +   +N L++MYSK
Sbjct: 8   KELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSK 67

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
           CG ++ A ++F++M  RS+VSW +M+  + + G  + A+ LF  M +EG     + ++S+
Sbjct: 68  CGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSV 127

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           + ACA    +   K +H +  +  + S+++V  AL+D+YAKCG + DA  VF  MP +  
Sbjct: 128 VCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSD 187

Query: 435 VSWNTMIG----------ALDLF-VAMLQNFEPDGVTMACILPACASLAALERGREIHGY 483
           V+W++M+           AL LF  A     E +  T++  L ACA+ AAL  G+++   
Sbjct: 188 VTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAV 247

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
             + GI ++  V ++++DMY KCG++  A ++F  +  K+++ W  +++G+  H    +A
Sbjct: 248 SCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEA 307

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           +  F  M+Q GI P+++++ISVL ACSH GLV++G ++F++M    N+ P + HY+CMVD
Sbjct: 308 MIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVD 367

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY 663
           +L R G L EA  FI+ MP    A++WGSLL  CRI+  ++LAE  A+H+FE+EP N G 
Sbjct: 368 ILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGN 427

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
           +VLL+N+YA  ++WEEV + R  +     KK  G SWIEIK KV+ F+ G  +HP   +I
Sbjct: 428 HVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEI 487

Query: 724 ESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRV 783
              L+ L  EMK+ GY  KT + L + +E  K+  L  HSEKLA+ FGI+ LP G  IR+
Sbjct: 488 YLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRI 547

Query: 784 TKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KNLR+CGDCH   K  S    REI++RD+NRFHHFK+G CSC  FW
Sbjct: 548 MKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 594



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 185/341 (54%), Gaps = 15/341 (4%)

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
           +G+ AD+ T + ++   +  G    V+ A KLFDE+  R +VSWN M+  +  NG  EK 
Sbjct: 49  VGLRADTITSNMLMNMYSKCG---LVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKA 105

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           L +F +M   G +    T+ +V+  CA    +   + +H FALK      +     LLD+
Sbjct: 106 LVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDV 165

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y+KCG +  A  VFE M ERS V+W+SM+AGY +  +++ A+ LF      G+E + + I
Sbjct: 166 YAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTI 225

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
           +S L ACA    L  GK V     +  + S+++V ++L+DMYAKCG + +A +VF+ +  
Sbjct: 226 SSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEE 285

Query: 432 KDIVSWNTMIGALDLFVAMLQN---FE--------PDGVTMACILPACASLAALERGREI 480
           K++V WN ++      V  L+    FE        P+ +T   +L AC+ L  +E+GR+ 
Sbjct: 286 KNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKY 345

Query: 481 HGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
              ++R H +S +    + +VD+  + G+L  A+   D +P
Sbjct: 346 FDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMP 386



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 192/380 (50%), Gaps = 35/380 (9%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +LQ  A  ++  +G   H+ I   G+  D  +  + L+ M+  CG ++  R++F+++   
Sbjct: 26  LLQSSARNRAAIEGMACHAQIIRVGLRADT-ITSNMLMNMYSKCGLVESARKLFDEMPVR 84

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS----------CVLKC---- 207
            +  WN ++  +++ G+ +++L LF +MQ  G +   +T S          CV +C    
Sbjct: 85  SLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLH 144

Query: 208 ------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                             L V      VKDA+ +F+ + +R  V+W+ M++GY+ N + E
Sbjct: 145 GFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYE 204

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + L +F     +G   +  T+ + LS CA   AL+ G+ V A + K      I   ++L+
Sbjct: 205 EALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLI 264

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           DMY+KCG ++ A  VF  + E++VV W ++++G++R      A+  F  M + GI P+  
Sbjct: 265 DMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDI 324

Query: 370 AITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
              S+L AC+  GL+E G+   D  I+ +++  ++   + ++D+  + G + +A+   ++
Sbjct: 325 TYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDR 384

Query: 429 MPVKDIVS-WNTMIGALDLF 447
           MP     S W +++ +  ++
Sbjct: 385 MPFDATASMWGSLLASCRIY 404



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/314 (20%), Positives = 143/314 (45%), Gaps = 39/314 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++N  +G   + G+ EKA+ +    +K        T  S++  CA    + + K++H   
Sbjct: 88  SWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFA 147

Query: 123 CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
            ++   +D  V +G+ L+ ++  CG +K+   VF  +       W+ ++  Y +   ++E
Sbjct: 148 LKTA--LDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEE 205

Query: 182 SLYLFKKMQSLGIAADSYTFSC------------------VLKCLAVVGNSRRV------ 217
           +L LF + Q++G+  + +T S                    + C   +G++  V      
Sbjct: 206 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLID 265

Query: 218 --------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                   ++A+ +F  + +++VV WN ++SG+  +  + + +  F++M  +G   +  T
Sbjct: 266 MYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 325

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            ++VLS C++ G +  GR      ++    S  +   + ++D+  + G L  A    ++M
Sbjct: 326 YISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRM 385

Query: 329 GERSVVS-WTSMIA 341
              +  S W S++A
Sbjct: 386 PFDATASMWGSLLA 399


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/738 (31%), Positives = 397/738 (53%), Gaps = 48/738 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N+ +  F + G   K+++V      SE+   D  T+  +L+ C+ L+    G +VH +
Sbjct: 142 SWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGL 201

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I   G    D V GS L+ M+  C  L +  ++F++I       W+ ++    +      
Sbjct: 202 IVRMGFY-KDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHIL 260

Query: 182 SLYLFKKMQSLGIAADSYTFSCV--------------------LKC------------LA 209
            L LFK+MQ +GI      ++ V                    LKC            L 
Sbjct: 261 GLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLD 320

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           +      + DA ++F+ L    +  +N +I G + N    + L+ F+ +L  G   +  +
Sbjct: 321 MYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEIS 380

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +    S CA+    + GR +H+ ++K+     I   N++LDMY KC  L  A  +F++M 
Sbjct: 381 LSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME 440

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            R  VSW ++IA + + G  +  + LF  M+R  +EPD +   S+L AC+    L  G +
Sbjct: 441 RRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGME 500

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL--- 446
           +H+ I ++ +    +V  AL+DMY KCG + +A+ + +++  + +VSWN +I    L   
Sbjct: 501 IHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKH 560

Query: 447 -------FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
                  F  ML+ + +PD  T A +L ACA+LA++  G++IHG I++  + +D  + + 
Sbjct: 561 SEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITST 620

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +VDMY KCG +  +  +F+  P KD ++W  MI GY  HG G +A+  F  M+   + P+
Sbjct: 621 LVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPN 680

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
             +F+S+L AC+H G +D+G  +FN M  E  +EP++EHY+CM+D++ R+G +SEA + I
Sbjct: 681 HATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLI 740

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           + MP   DA IW +LL  C+IH  +++AEK    + +LEP+++   +LL+N+YA+A  W 
Sbjct: 741 QEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWG 800

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           +V ++R+ +    LKK PGCSWIE+K +V+ F+ G  +HP  ++I  +L  L  EMK  G
Sbjct: 801 KVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIG 860

Query: 739 YFPKTRYALINADEMEKE 756
           Y P   + LI+ +  E E
Sbjct: 861 YIPDIDF-LIDEESEEYE 877



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 166/625 (26%), Positives = 299/625 (47%), Gaps = 77/625 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           N    I  FC +  L++         ++K+ TK  T+  I+Q C+D  SL+ GK+ H+ +
Sbjct: 18  NKTLRIFTFCTISTLQQ--------NQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARM 69

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             SG  I D  + + L+ M++ C  L    +VF K+    V  +N ++  Y+  G     
Sbjct: 70  IVSGF-IPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAG----- 123

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                             +  A++ F +   RDVVSWN M+SG+
Sbjct: 124 ---------------------------------EMNLANEFFYDTPKRDVVSWNSMLSGF 150

Query: 243 IANGVAEKGLEVFKEM---LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           + NG   K ++VF +M     +GF  D  T   VL  C+       G  VH   ++  F 
Sbjct: 151 LQNGECRKSIDVFLDMGRSEEVGF--DQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFY 208

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
           K++   + LLDMY+KC  LD ++++F ++  ++ V W+++IAG  +       + LF+ M
Sbjct: 209 KDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEM 268

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
            + GI        S+  +CA    L++G  +H +  + D  S + V  A +DMYAKCGS+
Sbjct: 269 QKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSL 328

Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPAC 468
           ADA+ +FN +P   +  +N +I           AL  F  +L++    + ++++    AC
Sbjct: 329 ADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSAC 388

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           AS+     GR++H   ++  + ++  VAN+I+DMY KC  L  A  +FD +  +D +SW 
Sbjct: 389 ASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWN 448

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRY 587
            +IA +  +G   + +  F  M +  +EPD+ ++ SVL ACS    ++ G    N +++ 
Sbjct: 449 AVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKS 508

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
              ++  +     ++D+  + G + EA +  + +      + W +++ G  +   +K +E
Sbjct: 509 GLGLDSFVG--GALIDMYCKCGMIEEAKKIHDRIEQQTMVS-WNAIIAGFTL---LKHSE 562

Query: 648 KVAEHVFEL-----EPDNTGYYVLL 667
                 +E+     +PDN  Y ++L
Sbjct: 563 DAHSFFYEMLKMSVKPDNFTYAIVL 587


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/593 (36%), Positives = 348/593 (58%), Gaps = 13/593 (2%)

Query: 250 KGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           + LE+F+ + LN  +++D  T   ++S C    ++   + V  + + +    +    N +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           L M+ KCG +  A R+F++M E++++SW ++I G    G +  A RLF  M ++  +   
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGS 232

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               +++ A A  GL+  G+ +H    +  +   ++V+ AL+DMY+KCGS+ DA+ VF+Q
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ 292

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERG 477
           MP K  V WN++I           AL ++  M  +  + D  T + I+  CA LA+LE  
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           ++ H  ++RHG   D     A+VD+Y K G +  A+ +FDM+P K++ISW  +IAGYG H
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G G +A+  F  M   G+ P+ V+F++VL ACS+SGL D GW  F  M  +  I+P+  H
Sbjct: 413 GRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMH 472

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           YACM++LL R G L EA+  I+  P  P   +W +LL  CR+H   +L +  AE ++ + 
Sbjct: 473 YACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMG 532

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           P+    YV+L N+Y  + + EE   + + + RRGL+  P CSWIEIK +   F++G   H
Sbjct: 533 PEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCH 592

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
             +K+I   L  L LE+ + GY P+ ++ L + DE E+ V L  HSEKLA+AFG++N   
Sbjct: 593 AQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQEERVLLY-HSEKLAIAFGLINTSD 651

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              +++ ++ R+CGDCH   K ++   RREIV+RD++RFHHFKDG CSC  +W
Sbjct: 652 WTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 206/413 (49%), Gaps = 29/413 (7%)

Query: 185 LFKKMQSLGIAADSYTFSCVL----KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
           +F  M + G+  D Y  + VL    KC  ++       DA +LFDE+ +++++SWN +I 
Sbjct: 153 VFNYMINSGLDPDEYLRNRVLLMHVKCGMMI-------DARRLFDEMPEKNILSWNTIIG 205

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G +  G   +   +F  M     +      VT++   A  G +  GR +H+ +LK     
Sbjct: 206 GLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGG 265

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++     L+DMYSKCG ++ A  VF++M E++ V W S+IAGYA  G  + A+ ++  M 
Sbjct: 266 DVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMR 325

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
             G++ D +  + I+  CA    LE  K  H  +  +     +  + AL+D+Y+K G + 
Sbjct: 326 DSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIE 385

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACA 469
           DA+ VF+ MP K+++SWN +I           A+++F  ML +   P+ VT   +L AC+
Sbjct: 386 DAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACS 445

Query: 470 SLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-W 527
                +RG EI   + R H I         ++++  + G+L  A +L    P K  ++ W
Sbjct: 446 YSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMW 505

Query: 528 TIMIAGYGMH-GFGCDAIATFNDMRQAGIEPDEVS-FISVLYACSHSGLVDEG 578
             ++    +H  F    +  F   +  G+ P+++S ++ +L   + SG ++E 
Sbjct: 506 AALLTACRVHKNF---ELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEA 555



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/405 (21%), Positives = 174/405 (42%), Gaps = 81/405 (20%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  IG   + G+  +A  +  +   + S   ++ + ++++  A L  +  G+++HS  
Sbjct: 199 SWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCS 258

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G V  D  +   L+ M+  CG +++ + VF+++       WN ++  Y+  G  +E+
Sbjct: 259 LKTG-VGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEA 317

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC-----------------------LAVVGNSR---- 215
           L ++ +M+  G+  D++TFS +++                        L +V N+     
Sbjct: 318 LSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDL 377

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R++DA  +FD +  ++V+SWN +I+GY  +G   + +E+F+ ML+ G   +  T 
Sbjct: 378 YSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTF 437

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG- 329
           + VLS C                                   S  G  D    +FE M  
Sbjct: 438 LAVLSAC-----------------------------------SYSGLSDRGWEIFESMSR 462

Query: 330 ----ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
               +   + +  MI    REG+ D A  L +       +P V    ++L AC      E
Sbjct: 463 DHKIKPRAMHYACMIELLGREGLLDEAFALIKD---APFKPTVNMWAALLTACRVHKNFE 519

Query: 386 IGKDVHDYIKENDMQS-SLYVSNALMDMYAKCGSMADAESVFNQM 429
           +GK   + +     +  S YV   L+++Y + G + +A +V   +
Sbjct: 520 LGKFAAEKLYGMGPEKLSNYV--VLLNIYNRSGRLEEAAAVIQTL 562


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/743 (32%), Positives = 391/743 (52%), Gaps = 47/743 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ +  + + G   K++E+       +I  D  T+  +L+ C  ++    G +VH + 
Sbjct: 137 SWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLA 196

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G    D V G+ LV M+ TC  L     +F ++       W+ ++  Y +   F E 
Sbjct: 197 IQMGF-DSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEG 255

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR--- 215
           L L+K M   G+     TF+   +  A                        +VG +    
Sbjct: 256 LKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDM 315

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R+ DA K+F+   +    S N +I GY       + LE+F+ +     + D  ++
Sbjct: 316 YAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISL 375

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
              L+ C+     + G  +H  A+K      I   NT+LDMY+KCG L  A  +F+ M  
Sbjct: 376 SGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEI 435

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           +  VSW ++IA + +    +  + LF  M+R  +EPD Y   S++ ACA    L  G +V
Sbjct: 436 KDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEV 495

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  + ++ M    +V +A++DMY KCG + +AE +  ++  +  VSWN++I         
Sbjct: 496 HGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQG 555

Query: 443 --ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL  F  MLQ    PD  T A +L  CA+LA +E G++IHG IL+  + +D  +A+ I
Sbjct: 556 ENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTI 615

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY KCG +  +R +F+  P +D ++W+ MI  Y  HG G DAI  F +M+   ++P+ 
Sbjct: 616 VDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNH 675

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
             FISVL AC+H G VD+G  +F  MR    ++P++EHY+CMVDLL R+G ++EA   IE
Sbjct: 676 TIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIE 735

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP   D  IW +LL  CR+   V++AEK A  + +L+P ++  YVLL+NVYA A  W E
Sbjct: 736 SMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGE 795

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V K+R  +    LKK PGCSWI+++ +V+ F+ G  +HP +++I      L  EMK +GY
Sbjct: 796 VAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGY 855

Query: 740 FPKTRYALINADEMEKEVALCGH 762
            P+    L++ +E++++ +  GH
Sbjct: 856 VPEIDGFLLD-EEVDEQDSYEGH 877



 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 184/664 (27%), Positives = 327/664 (49%), Gaps = 83/664 (12%)

Query: 82  AMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID----------- 130
           A+  + S++ +     T+  I Q C++LK++  GK+ H+ I  +G V             
Sbjct: 24  AIHSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFY 83

Query: 131 -------------------DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
                              D +  + ++F +   G+++  + +F+ +    V  WN ++ 
Sbjct: 84  CKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLS 143

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---------------CLA------- 209
            Y + G  ++S+ +F KM+ L I  D  TF+ VLK               CLA       
Sbjct: 144 CYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDS 203

Query: 210 --VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
             V G +        +++  A  +F E+ +R+ V W+ +I+GY+ N    +GL+++K ML
Sbjct: 204 DVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVML 263

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
           + G  V  AT  +    CA   A   G  +HA+ALK  F  +       LDMY+KC  + 
Sbjct: 264 DEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMV 323

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC- 378
            A +VF      +  S  ++I GYAR+     A+ +FR + +  ++ D  +++  L AC 
Sbjct: 324 DARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACS 383

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
           A  G LE G  +H    +  +  ++ V+N ++DMYAKCG++ +A  +F+ M +KD VSWN
Sbjct: 384 AIKGYLE-GIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWN 442

Query: 439 TMIGA----------LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRH 487
            +I A          L LFV+ML++  EPD  T   ++ ACA   AL  G E+HG +++ 
Sbjct: 443 AIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKS 502

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           G+  D  V +AI+DMY KCG+LV A  + + +  +  +SW  +I+G+     G +A++ F
Sbjct: 503 GMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYF 562

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
           + M Q G+ PD  ++ +VL  C++   V+ G +    +  +  +   +   + +VD+ S+
Sbjct: 563 SRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQI-LKLQLHSDVYIASTIVDMYSK 621

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH----HEVKLAEKVAEHVFELEPDNTGY 663
            GN+ ++    E  P   D   W +++C    H      +KL E++   +  ++P++T +
Sbjct: 622 CGNMQDSRIMFEKAP-KRDYVTWSAMICAYAYHGLGEDAIKLFEEM--QLQNVKPNHTIF 678

Query: 664 YVLL 667
             +L
Sbjct: 679 ISVL 682


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 252/717 (35%), Positives = 380/717 (52%), Gaps = 56/717 (7%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
            ++ N L+  Y+++G    +  LF  M    +    +T + +L  LA   ++R + D  +
Sbjct: 45  TYVLNHLLTAYARSGRLPLARRLFDAMPDPNL----FTRNALLSALA---HARLLPDMDR 97

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA-------TMVTVLS 275
           LF  +  RD VS+N +I+G+   G   +    ++ +L     VD A       TM  ++ 
Sbjct: 98  LFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVM 157

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF---------- 325
             +  G    GR VH   ++  F       + L+DMY+K G +  A RVF          
Sbjct: 158 AASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVM 217

Query: 326 ---------------------EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
                                E M +R  ++WT+M+ G  + G+   A+ +FR M  EG+
Sbjct: 218 YNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGV 277

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
             D Y   SIL AC      E GK +H Y        +++V +AL+DMY+KC S+  AE+
Sbjct: 278 GIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEA 337

Query: 425 VFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAA 473
           VF +M  K+I+SW  MI           A+ +F  M  +  +P+  T+  ++ +CA+LA+
Sbjct: 338 VFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLAS 397

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           LE G + H   L  G+     V++A+V +Y KCG +  A  LFD +P  D +S+T +++G
Sbjct: 398 LEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSG 457

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           Y   G   + I  F  M   G++P+ V+FI VL ACS SGLV++G  +F+ M+ +  I  
Sbjct: 458 YAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVL 517

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
             +HY CM+DL SR+G L EA  FI  MP  PDA  W +LL  CR+  ++++ +  AE++
Sbjct: 518 LDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENL 577

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
            + +P N   YVLL +++A   +W EV  LR  +  R +KK PGCSWI+ K +V+IF A 
Sbjct: 578 LKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSAD 637

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
             SHP +  I   L+ L  +M  EGY P     L +  + EK   L  HSEKLA+AFG++
Sbjct: 638 DQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLI 697

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +P    IRV KNLRVC DCH   KF+SK   R+I++RD+ RFH F +G CSC  FW
Sbjct: 698 FVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 185/385 (48%), Gaps = 43/385 (11%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+  ++ + A +  + D K+V        +V+ + V+ + ++   + C  ++E R VF  
Sbjct: 186 TWSPLVDMYAKMGLIGDAKRVFD-----EMVVKNVVMYNTMITGLLRCKMVEEARGVFEA 240

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS--- 214
           + +     W  ++   ++ G   E+L +F++M++ G+  D YTF  +L     +  S   
Sbjct: 241 MVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEG 300

Query: 215 -----------------------------RRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                                        R ++ A  +F  ++ ++++SW  MI GY  N
Sbjct: 301 KQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQN 360

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
           G  E+ + VF EM   G   +  T+ +V+S CAN  +L  G   H  AL +     I+ +
Sbjct: 361 GCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVS 420

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           + L+ +Y KCG ++ A R+F++M     VS+T++++GYA+ G     I LF  M+ +G++
Sbjct: 421 SALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVK 480

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKEND---MQSSLYVSNALMDMYAKCGSMADA 422
           P+      +L AC+  GL+E G      ++++    +    Y    ++D+Y++ G + +A
Sbjct: 481 PNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHY--TCMIDLYSRSGRLKEA 538

Query: 423 ESVFNQMP-VKDIVSWNTMIGALDL 446
           E    QMP   D + W T++ A  L
Sbjct: 539 EEFIRQMPRCPDAIGWATLLSACRL 563



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 148/350 (42%), Gaps = 76/350 (21%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG--VLGSKLVFMFVTCG 146
           +E   ID  T+ SIL  C  L + E+GK++H+    +   + DG   +GS LV M+  C 
Sbjct: 274 AEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRT---LYDGNIFVGSALVDMYSKCR 330

Query: 147 DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
            ++    VF ++    +  W  ++  Y + G  +E++ +F +MQ+ GI  + +T   V+ 
Sbjct: 331 SIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVIS 390

Query: 207 ---------------CLAVVGNSR-----------------RVKDAHKLFDELSDRDVVS 234
                          C+A+V   R                  ++DAH+LFDE+   D VS
Sbjct: 391 SCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVS 450

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           +  ++SGY   G A++ +++F++ML  G   +  T + VLS C+  G             
Sbjct: 451 YTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSG----------LVE 500

Query: 295 KAC---FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
           K C    S +      LLD +  C                       MI  Y+R G    
Sbjct: 501 KGCSYFHSMQQDHGIVLLDDHYTC-----------------------MIDLYSRSGRLKE 537

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           A    R M R    PD     ++L AC   G +EIGK   + + + D Q+
Sbjct: 538 AEEFIRQMPR---CPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQN 584


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/694 (34%), Positives = 381/694 (54%), Gaps = 46/694 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           +  ++ S++Q     KSL+ G+ +H+ I +         L + L+  +  C  L + + V
Sbjct: 7   NLSSFNSLVQFTHQ-KSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLV 65

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKES--LYLFKKMQSLGIAADSYTFSCVLKCLA--- 209
           F++I N  V  WN L++ YS+ G    S  + LF++M++  I  +++TFS +    +   
Sbjct: 66  FDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLS 125

Query: 210 ---------------------VVGNSRR--------VKDAHKLFDELSDRDVVSWNCMIS 240
                                 VG+S          + +A ++FD + +R+ V+W  MIS
Sbjct: 126 SIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMIS 185

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY    +A +  EVF+ M     +V+     +VLS  A    +  G+ +H  A+K     
Sbjct: 186 GYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLV 245

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            +S  N L+ MY+KCG LD +++VFE   +++ ++W++MI GYA+ G    A++LF  M 
Sbjct: 246 FLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMH 305

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
             GI P  + +  +L+AC+    +E GK VH+Y+ +   +S LY+  AL+DMYAK G   
Sbjct: 306 FAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTE 365

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACA 469
           DA   FN +   D+V W +MI           AL L+  M ++   P+ +TMA +L AC+
Sbjct: 366 DARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACS 425

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           +LAA ++GR+IH   +++G+  +  + +A+  MY KCG L     +F  +P +D+ISW  
Sbjct: 426 NLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNA 485

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           MI+G   +G+G +A+  F +MRQ   +PD+V+F++VL ACSH GLVD GW +F MM  E 
Sbjct: 486 MISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEF 545

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            + PK+EHYACMVD+LSR G L EA  FIE   +     +W  LL  CR +   +L    
Sbjct: 546 GLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYA 605

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
            E + EL    +  YVLL+ +Y    + E+V+++R  +  RG+ K PGCSWIE+K  V++
Sbjct: 606 GEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHV 665

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           FV G   HP   +I + + RL  +MK EGY P +
Sbjct: 666 FVVGDQMHPCIGEIRTEILRLSKQMKDEGYQPAS 699


>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
 gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/703 (34%), Positives = 386/703 (54%), Gaps = 70/703 (9%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S L+L ADL S  D      ++        D  + SKL  ++V        +  F+    
Sbjct: 5   SFLKLAADLSSFTDSSPFAKLL--------DSCIKSKLSAIYVRYVHASVIKSGFSN--- 53

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
            ++FI N L+  YSK G+ ++   +F KM    I    YT++ V+  L  +G    + +A
Sbjct: 54  -EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNI----YTWNSVVTGLTKLG---FLDEA 105

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
             LF  + +RD  +WN M+SG+  +   E+ L  F  M   GF ++  +  +VLS C+  
Sbjct: 106 DSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGL 165

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
             +  G  VH+   K+ F  ++   + L+DMYSKCG+++ A RVF++MG+R+VVSW S+I
Sbjct: 166 NDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND-M 399
             + + G    A+ +F+ M+   +EPD   + S++ ACA    +++G++VH  + +ND +
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI------------------------- 434
           ++ + +SNA +DMYAKC  + +A  +F+ MP++++                         
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345

Query: 435 ------VSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERG 477
                 VSWN +I           AL LF  +  ++  P   + A IL ACA LA L  G
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405

Query: 478 REIHGYILRHGI------SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            + H ++L+HG         D  V N+++DMYVKCG +     +F  +  +D +SW  MI
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
            G+  +G+G +A+  F +M ++G +PD ++ I VL AC H+G V+EG  +F+ M  +  +
Sbjct: 466 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 525

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P  +HY CMVDLL R G L EA   IE MP+ PD+ IWGSLL  C++H  + L + VAE
Sbjct: 526 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAE 585

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            + E+EP N+G YVLL+N+YAE  KWE+V  +R+ + + G+ K PGCSWI+I+G  ++F+
Sbjct: 586 KLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFM 645

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
               SHP  K+I SLL  L  EM+ E     T    ++++EM+
Sbjct: 646 VKDKSHPRKKQIHSLLDILIAEMRPEQ--DHTEIGSLSSEEMD 686



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 205/453 (45%), Gaps = 75/453 (16%)

Query: 65  NYNAEIGRFCEVGNLEKAM--EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N+ +  F +    E+A+    +   E   ++  ++ S+L  C+ L  +  G +VHS+I
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +S   + D  +GS LV M+  CG++ + +RVF+++ +  V  WN L+  + + G   E+
Sbjct: 179 AKSPF-LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA--------------VVGNSR------------- 215
           L +F+ M    +  D  T + V+   A              VV N +             
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297

Query: 216 ------RVKDAHKLFD-------------------------------ELSDRDVVSWNCM 238
                 R+K+A  +FD                               ++++R+VVSWN +
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I+GY  NG  E+ L +F  +          +   +L  CA+   L  G   H   LK  F
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417

Query: 299 ------SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
                   +I   N+L+DMY KCG ++    VF KM ER  VSW +MI G+A+ G  + A
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS-NALMD 411
           + LFR M+  G +PD   +  +L AC   G +E G+     +  +   + L      ++D
Sbjct: 478 LELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537

Query: 412 MYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           +  + G + +A+S+  +MP++ D V W +++ A
Sbjct: 538 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570


>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
          Length = 668

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/563 (41%), Positives = 338/563 (60%), Gaps = 19/563 (3%)

Query: 286 GRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           GR +H  AL++  F  +    + LL MY  C     A R F+++   + V  T+M +G  
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG--KDVHDYIKENDMQSS 402
           R  +    + +FR MV  G    V    +++   A   + + G    +H  + +  +   
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226

Query: 403 LYVSNALMDMYAKCGS--MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM 450
             V+N ++D YAK G   +  A  +F+ M  +D+VSWNTMI           AL L+  M
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLFDMMD-RDVVSWNTMIALYAQNGLSTEALGLYSKM 285

Query: 451 L---QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
           L    +   + VT++ +L ACA   A++ G+ IH  ++R G+  +  V  ++VDMY KCG
Sbjct: 286 LIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCG 345

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            + +A   F  I  K+++SW+ MIAGYGMHG+G +A+  F DMR++G++P+ ++FI+VL 
Sbjct: 346 KVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLA 405

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSH+GL+ EG  ++N M+ E  IEP +EHY CMVDLL R G L EAY  I+ M V PDA
Sbjct: 406 ACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 465

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            +WG+LL  CRI+  V+LA+  AE +FEL+  N+GYYVLL+N+YAEA  W+EV+++R  +
Sbjct: 466 ALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLV 525

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
             RG++K PG S +E+KGK ++F  G  SHP  K+I + L++L   +   GY P T   L
Sbjct: 526 KTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVL 585

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
            + D  E+E  L  HSEKLA+AF ++N   G  I V KNLRVC DCH   K ++K   RE
Sbjct: 586 HDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGRE 645

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           I++RD  RFHHFKDG CSC  +W
Sbjct: 646 IIIRDLKRFHHFKDGLCSCGDYW 668



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 176/374 (47%), Gaps = 43/374 (11%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           G+++H +   SG+   D    S L+ M+  C    + RR F++I      I   +     
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 175 KTGNFKESLYLFKKM-------------------------------------QSLGIAAD 197
           +      +L +F+ M                                       +G+   
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226

Query: 198 SYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
           +   + ++   A  G    +  A KLFD + DRDVVSWN MI+ Y  NG++ + L ++ +
Sbjct: 227 TGVANTIIDAYAK-GGGHDLGAARKLFD-MMDRDVVSWNTMIALYAQNGLSTEALGLYSK 284

Query: 258 MLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
           ML +G +V  +  T+  VL  CA+ GA+  G+ +H   ++      +    +++DMYSKC
Sbjct: 285 MLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKC 344

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G ++ A + F+K+  ++++SW++MIAGY   G    A+ +F  M + G++P+     ++L
Sbjct: 345 GKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVL 404

Query: 376 HACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-D 433
            AC+  GLL  G+  ++ +K E  ++  +     ++D+  + G + +A  +  +M VK D
Sbjct: 405 AACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPD 464

Query: 434 IVSWNTMIGALDLF 447
              W  ++ A  ++
Sbjct: 465 AALWGALLSACRIY 478



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 100/222 (45%), Gaps = 16/222 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           ++N  I  + + G   +A+    ++L      + +  T  ++L  CA   +++ GK++H+
Sbjct: 261 SWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHN 320

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            +   G+  D+  +G+ +V M+  CG ++   + F KI    +  W+ ++  Y   G  +
Sbjct: 321 QVVRMGLE-DNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQ 379

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-----DRDVVSW 235
           E+L++F  M+  G+  +  TF  V   LA   ++  + +    ++ +      +  V  +
Sbjct: 380 EALHVFTDMRKSGLKPNYITFITV---LAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHY 436

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
            CM+      G  ++   + KEM       D A    +LS C
Sbjct: 437 GCMVDLLGRAGCLDEAYGLIKEM---KVKPDAALWGALLSAC 475


>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/611 (36%), Positives = 352/611 (57%), Gaps = 45/611 (7%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           ++++  +  L  CA   +      +H+  +KA F K    +NTLLD+Y KCG +  A+++
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGIEPDVYAITSILHACACDGL 383
           F++M  R  VSW S++  + +  +    + +   M   +G++PD +    I+ AC+  G 
Sbjct: 61  FDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGY 120

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           L +GK VH     +       V ++L+DMY KCG   +A +VF+ +  K+ VSW +MI  
Sbjct: 121 LRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISG 180

Query: 443 ---------ALDLFV-AMLQNFEP--------------------------------DGVT 460
                    A+DLF+ A ++N                                   D + 
Sbjct: 181 YARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLV 240

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           ++ ++  CA+LA LE G++IHG ++  G  +   ++NA+VDMY KC  ++ A+ +F  +P
Sbjct: 241 LSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
            KD+ISWT +I G   HG   +A+  +++M  + I+P+EV+F+ +LYACSH+GLV  G  
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRE 360

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
            F  M  + +I P L+HY C++DLLSR+G+L EA   ++ +P  PD   W SLL  C  H
Sbjct: 361 LFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRH 420

Query: 641 HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSW 700
           + +++  ++A+ V +L+P++   Y+LL+NVYA AE W  V K+R+ +S   ++K PG S 
Sbjct: 421 NNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSS 480

Query: 701 IEIKGKVNIFVAGGS-SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
           I+      +F AG S  HP   +I +LLK L  EM++ GY P T + L + ++ EKE  L
Sbjct: 481 IDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQL 540

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
             HSE+LA+A+G+L    G  IR+ KNLR+CGDCH + KF+S   +REI++RD+ R+HHF
Sbjct: 541 FWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHF 600

Query: 820 KDGRCSCRGFW 830
           K+G+CSC  FW
Sbjct: 601 KEGKCSCNDFW 611



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 181/405 (44%), Gaps = 64/405 (15%)

Query: 83  MEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
           +  +++ +  + D   +  I++ C+ L  L  GK+VH+    S    DD V+ S L+ M+
Sbjct: 92  LNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFC-DDEVVKSSLIDMY 150

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
             CG   E R VF+ I       W  ++  Y+++G                         
Sbjct: 151 TKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGR------------------------ 186

Query: 203 CVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
              KC           +A  LF +   R++ SW  +ISG I +G       +F EM   G
Sbjct: 187 ---KC-----------EAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREG 232

Query: 263 FN-VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
            + VD   + +V+ GCAN   L  G+ +H   +   F   +  +N L+DMY+KC D+  A
Sbjct: 233 IDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAA 292

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F +M  + V+SWTS+I G A+ G  + A+ L+  MV   I+P+      +L+AC+  
Sbjct: 293 KDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHA 352

Query: 382 GLLEIGKDV-HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
           GL+  G+++      +  +  SL     L+D+ ++ G + +AE++ +++P          
Sbjct: 353 GLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIP---------- 402

Query: 441 IGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYIL 485
                        F+PD  T A +L AC     LE G  I   +L
Sbjct: 403 -------------FKPDEPTWASLLSACMRHNNLEMGVRIADRVL 434


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/669 (35%), Positives = 366/669 (54%), Gaps = 19/669 (2%)

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVV 233
           ++ G   E   + + ++ +G+ +D Y  + ++      G+   +++A  +F+    ++V 
Sbjct: 45  ARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGS---LEEARLVFEATPAKNVF 101

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC-ANCGALMFGRAVHAF 292
           SW  +I+    +G +++ L +F EML  G      +    ++ C A    L  GRA+HA 
Sbjct: 102 SWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHAL 161

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
             +  F   +    +L+ MYSKCG L+ +++ FE M E + VSW +MIA +A       A
Sbjct: 162 LRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEA 221

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
           +R  + M  EGI        +++ A      L+  + +HD I          V N +++M
Sbjct: 222 LRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD--VVNVILNM 279

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL---------FVAMLQN--FEPDGVTM 461
           Y KCG + DAE++F  M   D+++WNTMI A            F  ++Q     PD  T 
Sbjct: 280 YGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTY 339

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
             ++ ACA+L  +E G+++H  +          +AN++V+MY KCG+L +ARS+FD   A
Sbjct: 340 VSVIDACATLGDMEVGKQVHRRLGDRAFQVT-ELANSLVNMYGKCGILDVARSIFDKT-A 397

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           K  ++W  MI  Y  H     A   F  MR  G EP  ++F+SVL AC+++GL +E   +
Sbjct: 398 KGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSY 457

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           F  M+ +  + P   HY CMV+ L + G LS+A   I+ MP  PD   W S L  CR H 
Sbjct: 458 FVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHG 517

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
           ++K  +  A+    ++P+ +  YV LA ++A+A  ++E  ++R+ +  RG++KN G S I
Sbjct: 518 DMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSII 577

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCG 761
           ++   V  F AG  S+P +K+I   LKRL  EMKR GY P   +   + +  +KE  L  
Sbjct: 578 KLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFA 637

Query: 762 HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKD 821
           HSE+LA+AFGI++   G  +R+ KNLRVCGDCH M K  SK  RREI++RDSNRFHHFK+
Sbjct: 638 HSERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREIIVRDSNRFHHFKN 697

Query: 822 GRCSCRGFW 830
           G CSC+ FW
Sbjct: 698 GSCSCKDFW 706



 Score =  212 bits (539), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 245/513 (47%), Gaps = 59/513 (11%)

Query: 75  EVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           ++G +  A++ L   ++   D K    ++Q CA L +L +G+++H +I   G+   D  +
Sbjct: 15  QLGQIAAAIDAL--QKRKDADLKECVRVIQSCARLGALAEGRRIHQLIRRVGLG-SDVYV 71

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
            + LV M+  CG L+E R VF       VF W +L+   ++ G  +E+L LF +M   GI
Sbjct: 72  SNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGI 131

Query: 195 AADSYTFSCVLKCL------------------------AVVGNSRRV---------KDAH 221
              S +F+  +                           AVV  +  V         +++ 
Sbjct: 132 QPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESV 191

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           K F+ +++ + VSWN MI+ +  +    + L   ++M   G      T +T++S      
Sbjct: 192 KTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPS 251

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            L   R +H   L+  F +++   N +L+MY KCG L  A  +F+ M +  V++W +MIA
Sbjct: 252 QLKSARYIHDCILRTGFDQDVV--NVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIA 309

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
            Y++ G    A+R +  M  EG+ PD Y   S++ ACA  G +E+GK VH  + +   Q 
Sbjct: 310 AYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQV 369

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM- 450
           +  ++N+L++MY KCG +  A S+F++   K  V+WN MIG          A +LF+ M 
Sbjct: 370 T-ELANSLVNMYGKCGILDVARSIFDKT-AKGSVTWNAMIGAYAQHSHEQQAFELFLLMR 427

Query: 451 LQNFEPDGVTMACILPACASLAALERGREIHGYIL----RHGISADRNVANAIVDMYVKC 506
           L   EP  +T   +L ACA+    E   E H Y +     HG+         +V+   K 
Sbjct: 428 LDGEEPSYITFMSVLSACANAGLPE---EAHSYFVCMQQDHGVRPGGGHYGCMVESLGKA 484

Query: 507 GVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
           G L  A +L   +P   D+++WT  +A    HG
Sbjct: 485 GRLSDAEALIQGMPFEPDVLTWTSFLANCRSHG 517



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 171/327 (52%), Gaps = 14/327 (4%)

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
           + DL   V V+  CA  GAL  GR +H    +     ++  +N L+ MY KCG L+ A  
Sbjct: 31  DADLKECVRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARL 90

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC-ACDG 382
           VFE    ++V SWT +I   A+ G    A+ LF  M+++GI+P   + T+ ++AC A   
Sbjct: 91  VFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPE 150

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
            L  G+ +H  ++    Q ++  + +L+ MY+KCGS+ ++   F  M   + VSWN MI 
Sbjct: 151 FLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIA 210

Query: 443 AL-----------DLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
           A             L    L+      VT   ++ A    + L+  R IH  ILR G   
Sbjct: 211 AFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGF-- 268

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D++V N I++MY KCG L  A ++F  +   D+I+W  MIA Y  HG   +A+  +  M+
Sbjct: 269 DQDVVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQ 328

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEG 578
           + G+ PD+ +++SV+ AC+  G ++ G
Sbjct: 329 EEGVVPDDYTYVSVIDACATLGDMEVG 355



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 4/234 (1%)

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           ++ +CA L AL  GR IH  I R G+ +D  V+N +V MY KCG L  AR +F+  PAK+
Sbjct: 40  VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           + SWTI+I     HG   +A+A F +M + GI+P  VSF + + ACS         R  +
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
            +      +  +     +V + S+ G+L E+ +  E M    +A  W +++     H   
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESM-TELNAVSWNAMIAAFAEHRRG 218

Query: 644 KLAEKVAEHVFELEPDN--TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
             A +  + +F LE     +  Y+ L + Y +  + +  + + + I R G  ++
Sbjct: 219 LEALRTLQKMF-LEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD 271



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 152/363 (41%), Gaps = 60/363 (16%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKID-----TKTYCSILQLCADLKSLEDGKKVH 119
           ++NA I  F E     + +E L + +K  ++     + TY +++        L+  + +H
Sbjct: 204 SWNAMIAAFAE---HRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIH 260

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
             I  +G    D  + + ++ M+  CG L++   +F  +    V  WN ++  YS+ G+ 
Sbjct: 261 DCILRTGF---DQDVVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHT 317

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-------SRRVKD------------- 219
            E+L  ++ MQ  G+  D YT+  V+   A +G+        RR+ D             
Sbjct: 318 SEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTELANSLV 377

Query: 220 -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      A  +FD+ + +  V+WN MI  Y  +   ++  E+F  M   G      
Sbjct: 378 NMYGKCGILDVARSIFDKTA-KGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYI 436

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN------NTLLDMYSKCGDLDGAI 322
           T ++VLS CAN G        H++ +  C  ++            +++   K G L  A 
Sbjct: 437 TFMSVLSACANAG---LPEEAHSYFV--CMQQDHGVRPGGGHYGCMVESLGKAGRLSDAE 491

Query: 323 RVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV---YAITSILHAC 378
            + + M  E  V++WTS +A     G         +G +R  I+P+    Y   + +HA 
Sbjct: 492 ALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIR--IDPEASTGYVALARIHAD 549

Query: 379 ACD 381
           A D
Sbjct: 550 AGD 552


>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
 gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 249/689 (36%), Positives = 380/689 (55%), Gaps = 48/689 (6%)

Query: 94  IDTKTYCSILQLCAD-LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           +++    S+L+ C +  KSL   K VH  I   G+   D VL   L+ ++ TC D    R
Sbjct: 1   MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLR-RDVVLCKSLINVYFTCKDHCSAR 59

Query: 153 RVFNKID-NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI-AADSYTFSCVLK---- 206
            VF   D    V+IWN LM  YSK   F ++L +FK++ +  I   DS+TF  V+K    
Sbjct: 60  HVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGA 119

Query: 207 --------------------CLAVVGNS--------RRVKDAHKLFDELSDRDVVSWNCM 238
                               C  VV +S           +++ ++FDE+ +RDV SWN +
Sbjct: 120 LGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTV 179

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           IS +  +G AEK LE+F  M + GF  +  ++   +S C+    L  G+ +H   +K  F
Sbjct: 180 ISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF 239

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             +   N+ L+DMY KC  L+ A  VF+KM  +S+V+W SMI GY  +G     + +   
Sbjct: 240 ELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNR 299

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M+ EG  P    +TSIL AC+    L  GK +H Y+  + + + +YV+ +L+D+Y KCG 
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPA 467
              AE+VF++       SWN MI           A++++  M+    +PD VT   +LPA
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C+ LAALE+G++IH  I    +  D  + +A++DMY KCG    A  +F+ IP KD++SW
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSW 479

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
           T+MI+ YG HG   +A+  F++M++ G++PD V+ ++VL AC H+GL+DEG +FF+ MR 
Sbjct: 480 TVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRS 539

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD-ATIWGSLLCGCRIHHEVKLA 646
           +  IEP +EHY+CM+D+L R G L EAY  I+  P   D A +  +L   C +H E  L 
Sbjct: 540 KYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLG 599

Query: 647 EKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGK 706
           +++A  + E  PD+   Y++L N+YA  E W+  +++R K+   GL+K PGCSWIE+  K
Sbjct: 600 DRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDK 659

Query: 707 VNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
           V  F A   SH  A+ +   L  L   M+
Sbjct: 660 VCHFFAEDRSHLRAENVYECLALLSGHME 688



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 24/304 (7%)

Query: 53  ASISKTLVCKTK-----NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQL 105
           A++++T+  KT+     ++N  I  +  VGN  KA+EV     S   K D  T+ S+L  
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419

Query: 106 CADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI 165
           C+ L +LE GK++H  I ES +  D+ +L S L+ M+  CG+ KE  R+FN I    V  
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLL-SALLDMYSKCGNEKEAFRIFNSIPKKDVVS 478

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
           W +++  Y   G  +E+LY F +MQ  G+  D  T   +L  L+  G++  + +  K F 
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT---LLAVLSACGHAGLIDEGLKFFS 535

Query: 226 ELSDRD-----VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
           ++  +      +  ++CMI      G   +  E+ ++      N +L  + T+ S C   
Sbjct: 536 QMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAEL--LSTLFSACCLH 593

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV-----VS 335
                G  + A  L   +  + S    L ++Y+     D A RV  KM E  +      S
Sbjct: 594 LEHSLGDRI-ARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCS 652

Query: 336 WTSM 339
           W  M
Sbjct: 653 WIEM 656


>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
 gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/537 (41%), Positives = 322/537 (59%), Gaps = 26/537 (4%)

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGI 364
           N +L  Y +  DL  A  +FE+M ER +VSW +M++GYA+ G  D A  +F  M ++ GI
Sbjct: 30  NVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGI 89

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
                +   +L A   +G +E  K +     E+ M  +L   N LM      G +    +
Sbjct: 90  -----SWNGLLAAYVQNGRIEDAKRLF----ESKMDWTLVSWNCLMG-----GFVRKRRN 135

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAA 473
           +F+ MP +D +SW+ MI           AL  FV M ++ E  +  +  C L  C+++AA
Sbjct: 136 LFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAA 195

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           LE GR++H  +++ G      V NA++ MY KCG +  AR  F  I  KD++SW  MI G
Sbjct: 196 LELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHG 255

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           Y  HGFG +A+  F  M+  GI PD+ + +SVL ACSH+GLVD+G  +F  M  +  I  
Sbjct: 256 YARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITA 315

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
           KL HY CMVDLL R G L EA   ++ MP  PDA  WG+LL   RIH   +L EK A+ +
Sbjct: 316 KLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQII 375

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
           FE+EP N+G Y+LL+ +YA + +W +  K+R ++  +G+KK PG SW+E++ K++ F  G
Sbjct: 376 FEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVG 435

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
            +SHPH  KI + L+ + L++K+EGY   T     + +E EK   L  HSEKLA+A+GIL
Sbjct: 436 DTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYGIL 495

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +PAG+ IRV KNLRVC DCH   K++SK   R I+LRD++RFH+F+ G CSCR FW
Sbjct: 496 YIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 552



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 157/323 (48%), Gaps = 21/323 (6%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM------------ 189
           +V   DLK  R +F ++    +  WN ++  Y++ G   E+  +F KM            
Sbjct: 36  YVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLL 95

Query: 190 ----QSLGIAADSYTFSCVLKCLAVVGN---SRRVKDAHKLFDELSDRDVVSWNCMISGY 242
               Q+  I      F   +    V  N      V+    LFD +  RD +SW+ MI+GY
Sbjct: 96  AAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGY 155

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             NG +E+ L  F EM      ++ ++    LS C+N  AL  GR +H   +KA +    
Sbjct: 156 SQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGW 215

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              N LL MY KCG +D A   F+++ E+ VVSW +MI GYAR G  + A+ +F  M   
Sbjct: 216 YVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTT 275

Query: 363 GIEPDVYAITSILHACACDGLLEIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           GI PD   + S+L AC+  GL++ G +  +   ++  + + L     ++D+  + G + +
Sbjct: 276 GIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEE 335

Query: 422 AESVFNQMPVK-DIVSWNTMIGA 443
           A+++   MP + D  +W  ++GA
Sbjct: 336 AQNLMKNMPFEPDAATWGALLGA 358



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 169/358 (47%), Gaps = 47/358 (13%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  LFD++ +RD+ SWN M++GY+ N   +    +F+ M       D+ +   +LSG A 
Sbjct: 14  ARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPER----DIVSWNAMLSGYAQ 69

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE------------- 326
            G +   R +     K      IS+N  LL  Y + G ++ A R+FE             
Sbjct: 70  NGFVDEAREIF---YKMPLKNGISWNG-LLAAYVQNGRIEDAKRLFESKMDWTLVSWNCL 125

Query: 327 -------------KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
                         M +R  +SW++MIAGY++ G  + A+  F  M R+    +  + T 
Sbjct: 126 MGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTC 185

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD 433
            L  C+    LE+G+ +H  + +   Q+  YV NAL+ MY KCGS+ +A   F ++  KD
Sbjct: 186 ALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKD 245

Query: 434 IVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHG 482
           +VSWNTMI           AL +F  M      PD  TM  +L AC+    +++G E   
Sbjct: 246 VVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFY 305

Query: 483 YILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
            + R +GI+A       +VD+  + G L  A++L   +P   D  +W  ++    +HG
Sbjct: 306 SMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHG 363



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 106/218 (48%), Gaps = 16/218 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +++A I  + + G  E+A+      ++   +++  ++   L  C+++ +LE G+++H  +
Sbjct: 147 SWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRL 206

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G       +G+ L+ M+  CG + E R  F +I    V  WN ++H Y++ G  +E+
Sbjct: 207 VKAGYQTG-WYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEA 265

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD------VVSWN 236
           L +F+ M++ GI  D  T   V   LA   ++  V    + F  + +RD      +V + 
Sbjct: 266 LTVFELMKTTGIRPDDATMVSV---LAACSHAGLVDQGSEYFYSM-NRDYGITAKLVHYT 321

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
           CM+      G  E+   + K   N+ F  D AT   +L
Sbjct: 322 CMVDLLGRAGQLEEAQNLMK---NMPFEPDAATWGALL 356



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 9/121 (7%)

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           ++  Y++     LAR LFD +P +DL SW +M+ GY  +     A A F  M     E D
Sbjct: 1   MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMP----ERD 56

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            VS+ ++L   + +G VDE    F  M  +  I      +  ++    + G + +A R  
Sbjct: 57  IVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGIS-----WNGLLAAYVQNGRIEDAKRLF 111

Query: 619 E 619
           E
Sbjct: 112 E 112


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/720 (33%), Positives = 380/720 (52%), Gaps = 55/720 (7%)

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV------LKCLA- 209
           KI + +  + NL +   SK G   E+   F++M   G++   Y++ C+      L+ L+ 
Sbjct: 40  KISHKQGQVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSH 99

Query: 210 --VVGNSRR-----------------------VKDAHKLFDELSDRDVVSWNCMISGYIA 244
             ++ N  R                       ++DA KLFDE+SD + VS   MIS Y  
Sbjct: 100 GRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAE 159

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G+ +K + +F  ML  G     +   T+L    N  AL  GR +HA  ++A      S 
Sbjct: 160 QGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASI 219

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
              +++MY KCG L GA RVF++M  +  V+WT ++ GY + G    A++LF  ++ EG+
Sbjct: 220 ETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGV 279

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           E D +  + +L ACA    L  GK +H  + +  ++  + V   L+D Y KC S   A  
Sbjct: 280 EWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACR 339

Query: 425 VFNQMPVKDIVSWNTMIGA---LDLFVAMLQNFEP---------DGVTMACILPACASLA 472
            F ++   + VSW+ +I     +  F   ++ F+          +  T   I  AC+ LA
Sbjct: 340 AFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLA 399

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
               G ++H   ++  +   +   +A++ MY KCG L  A  +F+ +   D+++WT  I+
Sbjct: 400 DCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFIS 459

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           G+  +G   +A+  F  M   G++P+ V+FI+VL ACSH+GLV++G  + + M  + N+ 
Sbjct: 460 GHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVA 519

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P ++HY CM+D+ +R+G L EA RF++ MP  PDA  W   L GC  H  ++L +   E 
Sbjct: 520 PTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEE 579

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           + +L+P++T  YVL  N+Y  A KWEE  ++ + ++ R LKK   CSWI+ KGK++ F+ 
Sbjct: 580 LRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIV 639

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G   HP +++I   LK     M+ +         +      E+   L  HSE+LA+AFG+
Sbjct: 640 GDKHHPQSQEIYEKLKEFDGFMEGD---------MFQCSMTERREQLLDHSERLAIAFGL 690

Query: 773 L--NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +  N  A   I+V KNLR C DCHE AK +S     EIV+RDS RFHHFK+G+CSC  +W
Sbjct: 691 ISVNGNARAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 212/454 (46%), Gaps = 61/454 (13%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I  + E G L+KA+ +     +S  K  +  Y ++L+   + ++L+ G+++H+ +  +G+
Sbjct: 154 ISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGL 213

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              +  + + +V M+V CG L   +RVF+++   K   W  LM  Y++ G  +++L LF 
Sbjct: 214 C-SNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFV 272

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------------- 221
            + + G+  DS+ FS VLK  A +   R  K  H                          
Sbjct: 273 DLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCS 332

Query: 222 ------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVL 274
                 + F E+ + + VSW+ +ISGY      E+ ++ FK + +    V +  T  ++ 
Sbjct: 333 SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIF 392

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             C+       G  VHA A+K          + L+ MYSKCG LD A  VFE M    +V
Sbjct: 393 QACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIV 452

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD-Y 393
           +WT+ I+G+A  G    A+RLF  MV  G++P+     ++L AC+  GL+E GK   D  
Sbjct: 453 AWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTM 512

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQN 453
           +++ ++  ++   + ++D+YA+ G + +A      MP                       
Sbjct: 513 LRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMP----------------------- 549

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRH 487
           FEPD ++  C L  C +   LE G+ I G  LR 
Sbjct: 550 FEPDAMSWKCFLSGCWTHKNLELGK-IAGEELRQ 582



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 138/261 (52%), Gaps = 15/261 (5%)

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           ++++  K G+   +   S+    ++ G  + A   F+ M + G+   +Y+   +  AC  
Sbjct: 38  SVKISHKQGQVENLHLVSL----SKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRE 93

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
              L  G+ +H+ ++      S+ + N ++ MY +CGS+ DA+ +F++M   + VS  TM
Sbjct: 94  LRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTM 153

Query: 441 I------GALD----LFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGI 489
           I      G LD    LF  ML++ + P       +L +  +  AL+ GR+IH +++R G+
Sbjct: 154 ISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGL 213

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
            ++ ++   IV+MYVKCG LV A+ +FD +  K  ++WT ++ GY   G   DA+  F D
Sbjct: 214 CSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVD 273

Query: 550 MRQAGIEPDEVSFISVLYACS 570
           +   G+E D   F  VL AC+
Sbjct: 274 LITEGVEWDSFVFSVVLKACA 294



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 16/275 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSK----IDTKTYCSILQLCADLKSLEDGKKVHS 120
           +++A I  +C++   E+A++  + S +SK    +++ TY SI Q C+ L     G +VH+
Sbjct: 351 SWSAIISGYCQMSQFEEAVKT-FKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHA 409

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              +  + I      S L+ M+  CG L +   VF  +DN  +  W   +  ++  GN  
Sbjct: 410 DAIKRSL-IGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNAS 468

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS----WN 236
           E+L LF+KM S G+  +S TF  VL   +  G   + K  H L   L   +V      ++
Sbjct: 469 EALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK--HYLDTMLRKYNVAPTIDHYD 526

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
           CMI  Y  +G+ ++ L   K   N+ F  D  +    LSGC     L  G+ +    L+ 
Sbjct: 527 CMIDIYARSGLLDEALRFMK---NMPFEPDAMSWKCFLSGCWTHKNLELGK-IAGEELRQ 582

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
              ++ +      ++Y+  G  + A  V + M ER
Sbjct: 583 LDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNER 617


>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
           [Oryza sativa Japonica Group]
 gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
          Length = 836

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 251/783 (32%), Positives = 391/783 (49%), Gaps = 88/783 (11%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  +    E    ++A+ V    +   +  D  T   +L  C    +L +G+ VH+   
Sbjct: 124 WNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYAL 183

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +  +     V G  L  M+    D+    RV + +  G V  WN ++   ++ G   ++L
Sbjct: 184 KLALDAHPLVPGF-LAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDAL 242

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
            L  +M   G                                   + +V +WN ++SG  
Sbjct: 243 ELAARMSRSG----------------------------------PEPNVATWNTVLSGCS 268

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            +G   + L V   ML  G   D  T+ ++L   AN G L  G  +H F L+     ++ 
Sbjct: 269 RHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVY 328

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               L+DMY+KCG LD A +V + +  R++ +W S++AGYA  G FD A+ L        
Sbjct: 329 TGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELV------- 381

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
                                       + +K+N +   +   N L+  Y+  G  + A 
Sbjct: 382 ----------------------------ELMKKNRLDPDITTWNGLITGYSMNGQSSQAV 413

Query: 424 SVFNQMP----VKDIVSWNTMI------GALD---LFVAMLQN--FEPDGVTMACILPAC 468
            +  Q+       ++VSW ++I      G  +    F   +Q    +P  VTM+ +L AC
Sbjct: 414 LLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRAC 473

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A LA  ++G+E+H + LR     D  V+ A++DMY K G LV A+ +F+ I  K+L+   
Sbjct: 474 AGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCN 533

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            M+ G  +HG G +AI  F+DM  +G++PD ++F ++L AC   GLV EGW +F+ M  +
Sbjct: 534 AMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETK 593

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             ++P  E+YACMVDLL+R G L EA  FIE  P+ P A+ WG+LL GC IH  + LAE 
Sbjct: 594 YGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEV 653

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            A ++F LEP N+  Y+L+ N+Y     ++E + L+  +  RG+   PG SWI+I+  ++
Sbjct: 654 AARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIH 713

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
           +F   G  HP   +I   L RL  ++K+ GY P T     N  E EKE  L GH+EKLA+
Sbjct: 714 VFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAI 773

Query: 769 AFGILNLPAGQT-IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
            +G++   A +  +RV KN R+C DCHE+AK +S    R+I+LRD+ RFHHF DG+CSC 
Sbjct: 774 TYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCN 833

Query: 828 GFW 830
            +W
Sbjct: 834 DYW 836



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 89/232 (38%), Gaps = 42/232 (18%)

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGV-LVLARSLFDMIP--AKDLISWTIMIAGYG 535
           ++H   +R G+S D  V  A+VD+  + G     AR L +     AKD + W   +A   
Sbjct: 73  QLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLA 132

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPK 594
                 +AIA F +M+  G+  D  +   VL+AC  +G + EG       ++   +  P 
Sbjct: 133 EAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPL 192

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVA------------------------------ 624
           +  +  +  + +   +++ A R ++ M                                 
Sbjct: 193 VPGF--LAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSR 250

Query: 625 ----PDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLANV 670
               P+   W ++L GC  H   + A  V   + +  L PD T    LL +V
Sbjct: 251 SGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSV 302


>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 842

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 251/783 (32%), Positives = 391/783 (49%), Gaps = 88/783 (11%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  +    E    ++A+ V    +   +  D  T   +L  C    +L +G+ VH+   
Sbjct: 124 WNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYAL 183

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +  +     V G  L  M+    D+    RV + +  G V  WN ++   ++ G   ++L
Sbjct: 184 KLALDAHPLVPGF-LAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDAL 242

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
            L  +M   G                                   + +V +WN ++SG  
Sbjct: 243 ELAARMSRSG----------------------------------PEPNVATWNTVLSGCS 268

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            +G   + L V   ML  G   D  T+ ++L   AN G L  G  +H F L+     ++ 
Sbjct: 269 RHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVY 328

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               L+DMY+KCG LD A +V + +  R++ +W S++AGYA  G FD A+ L        
Sbjct: 329 TGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELV------- 381

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
                                       + +K+N +   +   N L+  Y+  G  + A 
Sbjct: 382 ----------------------------ELMKKNRLDPDITTWNGLITGYSMNGQSSQAV 413

Query: 424 SVFNQMP----VKDIVSWNTMI------GALD---LFVAMLQN--FEPDGVTMACILPAC 468
            +  Q+       ++VSW ++I      G  +    F   +Q    +P  VTM+ +L AC
Sbjct: 414 LLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRAC 473

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A LA  ++G+E+H + LR     D  V+ A++DMY K G LV A+ +F+ I  K+L+   
Sbjct: 474 AGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCN 533

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            M+ G  +HG G +AI  F+DM  +G++PD ++F ++L AC   GLV EGW +F+ M  +
Sbjct: 534 AMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETK 593

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             ++P  E+YACMVDLL+R G L EA  FIE  P+ P A+ WG+LL GC IH  + LAE 
Sbjct: 594 YGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEV 653

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            A ++F LEP N+  Y+L+ N+Y     ++E + L+  +  RG+   PG SWI+I+  ++
Sbjct: 654 AARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIH 713

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
           +F   G  HP   +I   L RL  ++K+ GY P T     N  E EKE  L GH+EKLA+
Sbjct: 714 VFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAI 773

Query: 769 AFGILNLPAGQT-IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
            +G++   A +  +RV KN R+C DCHE+AK +S    R+I+LRD+ RFHHF DG+CSC 
Sbjct: 774 TYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCN 833

Query: 828 GFW 830
            +W
Sbjct: 834 DYW 836



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 89/232 (38%), Gaps = 42/232 (18%)

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGV-LVLARSLFDMIP--AKDLISWTIMIAGYG 535
           ++H   +R G+S D  V  A+VD+  + G     AR L +     AKD + W   +A   
Sbjct: 73  QLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLA 132

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPK 594
                 +AIA F +M+  G+  D  +   VL+AC  +G + EG       ++   +  P 
Sbjct: 133 EAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPL 192

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVA------------------------------ 624
           +  +  +  + +   +++ A R ++ M                                 
Sbjct: 193 VPGF--LAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSR 250

Query: 625 ----PDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLANV 670
               P+   W ++L GC  H   + A  V   + +  L PD T    LL +V
Sbjct: 251 SGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSV 302


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 212/508 (41%), Positives = 316/508 (62%), Gaps = 11/508 (2%)

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSW S+I G  REG  + A+  F+ M    ++ D Y + S+L++ A   +++    VH  
Sbjct: 7   VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           I +   ++   V+NAL+DMYAK G +  A  VF++M  KD+VSW +++           A
Sbjct: 67  IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126

Query: 444 LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           + LF  M +    PD + +A +L ACA L  ++ G++IH  +++ G+ +  +V N++V M
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y KCG +V A   FD +P +D+ISWT +I GY  +G G  ++  ++ M   G +PD ++F
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           I +L+ACSH+GL+  G  +F  M     I+P  EHYACM+DLL R+G L+EA   +  M 
Sbjct: 247 IGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMV 306

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           VAPDA +W +LL  CR+H E++L E  A+++FELEP N+  YV+L+N+Y+ A KWE+  +
Sbjct: 307 VAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAAR 366

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R  +  RG+ K PG SWIE   KV+ F++   +HP   +I S +  + + +K  GY P 
Sbjct: 367 IRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPD 426

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
             +AL + D+  KE+ L  HSEKLA+AFG+L +P G  IR+ KNLRVCGDCH   K+ SK
Sbjct: 427 MSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSK 486

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              R I+LRDSN FHHF +GRCSC  +W
Sbjct: 487 VYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 173/320 (54%), Gaps = 13/320 (4%)

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           D VSWN +I G +  G  E  L  F++M +    +D  T+ +VL+  A+   +    +VH
Sbjct: 5   DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
              +K  F      NN L+DMY+K G LD AI VF KM ++ VVSWTS++ GY+  G ++
Sbjct: 65  CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            AI+LF  M   G+ PD  A+ S+L ACA   +++ G+ +H  + ++ ++SSL V N+L+
Sbjct: 125 EAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLV 184

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGV 459
            MYAKCGS+ DA   F+ MP +D++SW  +I           +L  +  M+    +PD +
Sbjct: 185 TMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYI 244

Query: 460 TMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFD- 517
           T   +L AC+    L  GR     + + +GI         ++D+  + G L  A+ L + 
Sbjct: 245 TFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQ 304

Query: 518 MIPAKDLISWTIMIAGYGMH 537
           M+ A D + W  ++A   +H
Sbjct: 305 MVVAPDAVVWKALLAACRVH 324



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 158/312 (50%), Gaps = 34/312 (10%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA---VVGNSRRVK---- 218
           WN L+    + G  +++L  F+KM+S  +  D YT   VL   A   V+ N+  V     
Sbjct: 9   WNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLII 68

Query: 219 ----DAHKL---------------------FDELSDRDVVSWNCMISGYIANGVAEKGLE 253
               +A+KL                     F ++ D+DVVSW  +++GY  NG  E+ ++
Sbjct: 69  KTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIK 128

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           +F +M   G   D   + +VLS CA    + FG+ +HA  +K+     +S +N+L+ MY+
Sbjct: 129 LFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYA 188

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
           KCG +  A R F+ M  R V+SWT++I GYA+ G    +++ +  M+  G +PD      
Sbjct: 189 KCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIG 248

Query: 374 ILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV- 431
           +L AC+ +GLL  G+   + + K   ++        ++D+  + G +A+A+ + NQM V 
Sbjct: 249 LLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVA 308

Query: 432 KDIVSWNTMIGA 443
            D V W  ++ A
Sbjct: 309 PDAVVWKALLAA 320



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 151/379 (39%), Gaps = 69/379 (18%)

Query: 89  SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           S   KID  T  S+L   A +K +++   VH +I ++G      ++ + L+ M+   G L
Sbjct: 34  SRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEAYK-LVNNALIDMYAKQGKL 92

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
                VF+K+ +  V  W  L+  YS  G+++E++ LF KM+  G+  D    + VL   
Sbjct: 93  DCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSAC 152

Query: 209 A------------------------VVGNSR--------RVKDAHKLFDELSDRDVVSWN 236
           A                         V NS          + DA++ FD +  RDV+SW 
Sbjct: 153 AELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWT 212

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            +I GY  NG  +  L+ + +M+  G   D  T + +L  C++ G L  GRA        
Sbjct: 213 ALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRA-------- 264

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
                          Y +  D    I+   +        +  MI    R G    A  L 
Sbjct: 265 ---------------YFEAMDKVYGIKPGPE-------HYACMIDLLGRSGKLAEAKGLL 302

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAK 415
             MV   + PD     ++L AC     LE+G+     + E   M S  YV   L +MY+ 
Sbjct: 303 NQMV---VAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYV--MLSNMYSA 357

Query: 416 CGSMADAESVFNQMPVKDI 434
            G   DA  +   M  + I
Sbjct: 358 AGKWEDAARIRRLMRSRGI 376



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 7/158 (4%)

Query: 46  CTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSIL 103
           C I   S  + K +V    ++ + +  +   G+ E+A+++      S +  D     S+L
Sbjct: 94  CAIMVFSKMVDKDVV----SWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVL 149

Query: 104 QLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKV 163
             CA+L  ++ G+++H+ + +SG+     V  S LV M+  CG + +  R F+ +    V
Sbjct: 150 SACAELTVMDFGQQIHATLVKSGLESSLSVDNS-LVTMYAKCGSIVDANRAFDNMPTRDV 208

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
             W  L+  Y++ G  K SL  + +M + G   D  TF
Sbjct: 209 ISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/688 (35%), Positives = 381/688 (55%), Gaps = 48/688 (6%)

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
           L   +  LG  +D+   + ++   A  G  R    A ++F  + +R+VVSW  ++ G++ 
Sbjct: 26  LHGALLKLGFGSDTMLGNNLIDMYAKCGELRM---AGEVFGGMPERNVVSWTALMVGFLR 82

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLA----TMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           +G A + L +   M +L    D+A    T+   L  C   G +  G  +H   ++A F  
Sbjct: 83  HGDARECLRLLGAMRSLS---DVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEG 139

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                N+L+ +YSK G +  A RVF+    R++V+W +MI+GYA  G    ++ +FR M 
Sbjct: 140 HHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQ 199

Query: 361 R-----EGIEPDVYAITSILHACACDGLLEIGKDVHD--YIKENDMQSSLYVSNALMDMY 413
           +     E  +PD +   S+L AC   G    G  VH    I+     S+  ++ AL+DMY
Sbjct: 200 QRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMY 259

Query: 414 AKCGSMAD-AESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTM 461
            KC  +   A  VFN++  K+ + W T+I           A++LF     +    DG  +
Sbjct: 260 VKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVL 319

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
           + ++   A  A +E+GR++H Y ++     D +VAN+++DMY KCG+   A   F  +PA
Sbjct: 320 SSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPA 379

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           ++++SWT MI G G HG G +AI  F +MR  G+EPDEV+++++L ACSHSGLV+E  R+
Sbjct: 380 RNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRY 439

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           F+ +R++  + P+ EHYACMVDLL R G LSEA   +  MP+AP   +W +LL  CR+H 
Sbjct: 440 FSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHK 499

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
            V +  +  E +  ++ DN   YV+L+N++AEA  W E +++R  + RRGL+K  GCSW+
Sbjct: 500 NVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWV 559

Query: 702 EIKGKVNIFVAGG-SSHPHAKKIESLLKRLRLEMK-REGYFP-----KTRYALINADEME 754
           E+  + + F  GG  SHP A  I  +L+ +   M+ R GY P      +  AL + DE  
Sbjct: 560 EVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERLGYSPGSSSSSSEAALHDVDEES 619

Query: 755 KEVALCGHSEKLAMAF------------GILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           +  +L  HSE+LA+              G+      + IRV KNLRVCGDCHE  K +S 
Sbjct: 620 RAESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYKNLRVCGDCHEFFKGLSS 679

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              R +V+RD+NRFH F+DG CSC+ +W
Sbjct: 680 VVGRVLVVRDANRFHRFEDGVCSCKDYW 707



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 225/500 (45%), Gaps = 65/500 (13%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           K    +L+  A   ++  G ++H  + + G    D +LG+ L+ M+  CG+L+    VF 
Sbjct: 5   KMIADMLRASAASSAIHGGAQLHGALLKLGFG-SDTMLGNNLIDMYAKCGELRMAGEVFG 63

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGN-- 213
            +    V  W  LM  + + G+ +E L L   M+SL  +A + +T S  LK   VVG+  
Sbjct: 64  GMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMA 123

Query: 214 ------------------------------SRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                           R+ DA ++FD    R++V+WN MISGY 
Sbjct: 124 AGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYA 183

Query: 244 ANGVAEKGLEVFKEMLNL-----GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
             G     L VF+EM            D  T  ++L  C + GA   G  VHA  +    
Sbjct: 184 HAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGV 243

Query: 299 SKEIS--FNNTLLDMYSKCG-DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
           S   +      LLDMY KC   L  A++VF ++ +++ + WT++I G+A+EG    A+ L
Sbjct: 244 STASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMEL 303

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           F      G+  D + ++S++   A   L+E G+ VH Y  +      + V+N+L+DMY K
Sbjct: 304 FGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHK 363

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACI 464
           CG   +A   F ++P +++VSW  MI           A+ +F  M  +  EPD V    +
Sbjct: 364 CGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLAL 423

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVA------NAIVDMYVKCGVLVLARSLFDM 518
           L AC+    +E  R     I RH    DR +         +VD+  + G L  A+ L   
Sbjct: 424 LSACSHSGLVEECRRYFSAI-RH----DRRLRPRAEHYACMVDLLGRAGELSEAKDLVAT 478

Query: 519 IPAKDLIS-WTIMIAGYGMH 537
           +P    +  W  +++   +H
Sbjct: 479 MPMAPTVGVWQTLLSACRVH 498



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 202/425 (47%), Gaps = 32/425 (7%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +  +L   A   A+  G  +H   LK  F  +    N L+DMY+KCG+L  A  VF  M 
Sbjct: 7   IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDGLLEIGK 388
           ER+VVSWT+++ G+ R G     +RL   M     + P+ + +++ L AC   G +  G 
Sbjct: 67  ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGV 126

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
            +H        +    V+N+L+ +Y+K G + DA  VF+    +++V+WN MI       
Sbjct: 127 WIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAG 186

Query: 443 ----ALDLFVAMLQ------NFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
               +L +F  M Q      + +PD  T A +L AC SL A   G ++H  ++  G+S  
Sbjct: 187 HGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTA 246

Query: 493 RN--VANAIVDMYVKCGVLV-LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
            N  +A A++DMYVKC  L+ +A  +F+ +  K+ I WT +I G+   G   +A+  F  
Sbjct: 247 SNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGR 306

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
              +G+  D     SV+   +   LV++G R  +    +      +     ++D+  + G
Sbjct: 307 FWSSGVRADGHVLSSVVGVFADFALVEQG-RQVHCYTVKTPAGLDVSVANSLIDMYHKCG 365

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE------LEPDNTGY 663
              EA R    +P A +   W +++ G   H       + A H+FE      +EPD   Y
Sbjct: 366 LTDEAARRFREVP-ARNVVSWTAMINGLGKHGH----GQEAIHMFEEMRAEGVEPDEVAY 420

Query: 664 YVLLA 668
             LL+
Sbjct: 421 LALLS 425



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 41/258 (15%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL-------YSSEKSKIDTKTYCSILQLCADLKSLEDGKK 117
            +NA I  +   G+   ++ V           E  + D  T+ S+L+ C  L +  +G +
Sbjct: 174 TWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQ 233

Query: 118 VHSIICESGI-VIDDGVLGSKLVFMFVTCG-DLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
           VH+ +   G+    + +L   L+ M+V C   L    +VFN+++      W  ++  +++
Sbjct: 234 VHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQ 293

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRRVK-------------- 218
            G  KE++ LF +  S G+ AD +  S V+      A+V   R+V               
Sbjct: 294 EGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSV 353

Query: 219 ---------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
                          +A + F E+  R+VVSW  MI+G   +G  ++ + +F+EM   G 
Sbjct: 354 ANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGV 413

Query: 264 NVDLATMVTVLSGCANCG 281
             D    + +LS C++ G
Sbjct: 414 EPDEVAYLALLSACSHSG 431


>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/611 (37%), Positives = 338/611 (55%), Gaps = 63/611 (10%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +FD   +   + WN MI  Y  +    + LE++  M+                    
Sbjct: 102 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVE------------------- 142

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
                          K    +++     L+DMYSK GDL  A  VF+KM +R VV+W +M
Sbjct: 143 ---------------KGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 187

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           IAG ++      A R+F  MV +    D  +  +++   A +G      ++ D +K  ++
Sbjct: 188 IAGLSQSEDPYVARRVFDQMVDQ----DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 243

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGV 459
                  N ++  Y + G   +A S F+QM                     L+NF P+ V
Sbjct: 244 -----TWNVIIAAYMQNGHAKEAISSFHQM--------------------RLENFHPNSV 278

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           T   +LPA A LAA   G   H  I++ G  ++  V N+++DMY KCG L  +  LF+ +
Sbjct: 279 TFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEM 338

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
             KD +SW  M++GY +HG G  AIA F+ M+++ ++ D VSF+SVL AC H+GLV+EG 
Sbjct: 339 DHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGR 398

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
           + F+ M  + +I+P LEHYACMVDLL R G   E   FI++MPV PDA +WG+LL  CR+
Sbjct: 399 KIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRM 458

Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
           H  VKL E   +H+ +LEP N  ++V+L+++YA++ +W +  K R K++  GLKK PGCS
Sbjct: 459 HSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCS 518

Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
           W+E+K KV+ F  G  SHP  + +  L   L  +M++ GY P     L N +E +KE+ L
Sbjct: 519 WVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFL 578

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
             HSE+LA+ F +LN P G TI++ KNLRVC DCH   KF+SK   R I++RD+ RFHHF
Sbjct: 579 YSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHF 638

Query: 820 KDGRCSCRGFW 830
           +DG CSC  +W
Sbjct: 639 EDGICSCNDYW 649



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 167/336 (49%), Gaps = 10/336 (2%)

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLL 169
           K   +  +++  + E G +  D  +G+ LV M+   GDLK  R VF+K+    V  WN +
Sbjct: 128 KQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 187

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD 229
           +   S++    E  Y+ +++    +  D  ++  ++   A  G    V +   LFD++  
Sbjct: 188 IAGLSQS----EDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLE---LFDKMKL 240

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
            +V +WN +I+ Y+ NG A++ +  F +M    F+ +  T V+VL   A   A   G A 
Sbjct: 241 GNV-TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF 299

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           HA  ++  F       N+L+DMY+KCG LD + ++F +M  +  VSW +M++GYA  G  
Sbjct: 300 HACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHG 359

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV-HDYIKENDMQSSLYVSNA 408
           D AI LF  M    ++ D  +  S+L AC   GL+E G+ + H    +  ++  L     
Sbjct: 360 DRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYAC 419

Query: 409 LMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           ++D+  + G   +       MPV+ D   W  ++G+
Sbjct: 420 MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGS 455


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/691 (35%), Positives = 378/691 (54%), Gaps = 34/691 (4%)

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR--------------- 216
           ++S++ +   SL L   +QS G A D     C+   L + G +                 
Sbjct: 7   QHSRSLDTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHC 66

Query: 217 --VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             V  A +LFD +   ++VSW  ++SG   N +    L  F  M   G       + +  
Sbjct: 67  ADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAA 126

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
              A   A   G  +H   ++  F  E+   + L DMYSK G L  A RVF++M ++  V
Sbjct: 127 RAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAV 186

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACAC--DGLLEIGKDVH 391
           +WT+MI GYA+ G  + A+  FR M REG +  D + + S+L A     DG L   + +H
Sbjct: 187 AWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWL--ARAIH 244

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN-QMPVKDIVSWNTMIG-------- 442
             + ++  +  + V NAL DMYAK   M +A  V        ++VS  ++I         
Sbjct: 245 SCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCI 304

Query: 443 --ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL +F+ +  Q  EP+  T + ++  CA  A LE+G ++H  +++  + +D  V++ +
Sbjct: 305 EKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTL 364

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           +DMY KCG++ L+  LF  I     I+W   I     HG G +AI  F+ M  +GI P+ 
Sbjct: 365 LDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNH 424

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           ++F+S+L ACSH+GLVDEG ++F  M+    IEPK EHY+C++D+  R G L EA +FI 
Sbjct: 425 ITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIG 484

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MPV P+A  W SLL  CR+    +L E  A+++ +LEPDNTG +V L+ +YA   +WE+
Sbjct: 485 EMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWED 544

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           VK +R+ +    +KK PG SW++   K ++F +   SHP  +KI   L+ L   +K EGY
Sbjct: 545 VKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGY 604

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P TR+   N ++  K+  L  HSE++A+AF ++++PA + I V KNLR+C DCH   KF
Sbjct: 605 VPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKF 664

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +SK   R+I++RD++RFHHF  G CSC  +W
Sbjct: 665 ISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 232/529 (43%), Gaps = 57/529 (10%)

Query: 94  IDTKTYCSI---LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           +DT T   +   LQ C     L  G+ +H+ +  SG       L + L+ M+  C D+  
Sbjct: 12  LDTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPS 71

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV------ 204
             R+F+ +    +  W  L+   ++    +++L  F  M   G+    +  S        
Sbjct: 72  AVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAA 131

Query: 205 ---------LKCLAV-----------------VGNSRRVKDAHKLFDELSDRDVVSWNCM 238
                    L C+ V                    S  + +A ++FD++  +D V+W  M
Sbjct: 132 LAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAM 191

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGF-NVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           I GY  NG  E  +  F++M   G    D   + +VLS           RA+H+  +K+ 
Sbjct: 192 IDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSG 251

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFE-KMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
           F +E++  N L DMY+K  D+D A RV +   G  +VVS TS+I GY      + A+ +F
Sbjct: 252 FEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMF 311

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             + R+G+EP+ +  +S++  CA   LLE G  +H  + +  + S  +VS+ L+DMY KC
Sbjct: 312 IELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKC 371

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACIL 465
           G ++ +  +F ++     ++WN  I           A+  F  M  +   P+ +T   +L
Sbjct: 372 GLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLL 431

Query: 466 PACASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-D 523
            AC+    ++ G +  +     HGI       + I+DMY + G L  A      +P K +
Sbjct: 432 TACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPN 491

Query: 524 LISWTIMIAGYGMHGFG-CDAIATFNDMRQAGIEPDEVSF---ISVLYA 568
              W  ++    M G      IA  N M+   +EPD       +S +YA
Sbjct: 492 AYGWCSLLGACRMRGNKELGEIAADNMMK---LEPDNTGVHVSLSGIYA 537



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 11/196 (5%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I  + E   +EKA+ +     +  ++    T+ S+++ CA    LE G ++H+ + ++ +
Sbjct: 295 IDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSL 354

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
            I D  + S L+ M+  CG +    ++F +I+      WN  ++  ++ G+ +E++  F 
Sbjct: 355 -ISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFD 413

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGY 242
           +M S GI  +  TF  +L   +  G    V +  K F  + D   +      ++C+I  Y
Sbjct: 414 RMTSSGIRPNHITFVSLLTACSHAG---LVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMY 470

Query: 243 IANGVAEKGLEVFKEM 258
              G  ++  +   EM
Sbjct: 471 GRAGRLDEAEKFIGEM 486


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/612 (36%), Positives = 340/612 (55%), Gaps = 21/612 (3%)

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
            SWN  +       +  + + +++ ML  G + D  +   +L  CA+    + G+ +H  
Sbjct: 16  TSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV--VSWTSMIAGYAREGVFD 350
            ++     E      L+ MY KCG ++ A +VFE+    S   V + ++I+GY       
Sbjct: 76  VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135

Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
            A  +FR M   G+  D   I  ++  C     L +G+ +H    +    S + V N+ +
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195

Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD---LFVAMLQNFE--------PDGV 459
            MY KCGS+     +F++MPVK +++WN +I       L   +L+ FE        PD  
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           T+  +L +CA L A + G+E+   +  +G + +  ++NA++ MY +CG L  AR++FD++
Sbjct: 256 TLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
           P K L+SWT MI  YGMHG G   +  F+DM + GI PD   F+ VL ACSHSGL D+G 
Sbjct: 316 PVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 375

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
             F  M+ E  +EP  EHY+C+VDLL R G L EA  FI+ MPV PD  +WG+LL  C+I
Sbjct: 376 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKI 435

Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
           H  V +AE     V E EP N GYYVL++N+Y++++  E + ++R  +  R  +K PG S
Sbjct: 436 HKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 495

Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE-MKREGYFPKTRYALINADEMEKEVA 758
           ++E KGKV++F+AG  SH   +++  +L  L    M+  G     R   +++   E    
Sbjct: 496 YVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEEVSSTTRE---- 551

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
              HSE+LA+AFGILN   G  I V KNLRVC DCH   K +SK   R  V+RD++RFH+
Sbjct: 552 ---HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRFHY 608

Query: 819 FKDGRCSCRGFW 830
           FKDG CSC+ +W
Sbjct: 609 FKDGVCSCKDYW 620



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 224/469 (47%), Gaps = 50/469 (10%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-----LAVVGNSRR---- 216
           WN+ + E +    F ES+ L++ M   G + D+++F  +LK      L V G        
Sbjct: 18  WNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVI 77

Query: 217 -----------------------VKDAHKLFDE--LSDRDVVSWNCMISGYIANGVAEKG 251
                                  V+DA K+F+E   S +  V +N +ISGY AN      
Sbjct: 78  RGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDA 137

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
             +F+ M   G +VD  T++ ++  C     L  GR++H   +K     E++  N+ + M
Sbjct: 138 AFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITM 197

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y KCG ++   R+F++M  + +++W ++I+GY++ G+    + LF  M   G+ PD + +
Sbjct: 198 YMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTL 257

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            S+L +CA  G  +IG++V + ++ N    ++++SNAL+ MYA+CG++A A +VF+ MPV
Sbjct: 258 VSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPV 317

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           K +VSW  MIG           L LF  M++    PDG     +L AC+     ++G E+
Sbjct: 318 KSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 377

Query: 481 HGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
              + R + +       + +VD+  + G L  A    D +P + D   W  ++    +H 
Sbjct: 378 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHK 437

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG-WRFFNMMR 586
               A   F  + +   EP  + +  ++          EG WR   MMR
Sbjct: 438 NVDMAELAFAKVIE--FEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMR 484



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 198/410 (48%), Gaps = 46/410 (11%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S  D  ++  IL+ CA L     G+++H  +   G   +  VL + L+ M+  CG +++ 
Sbjct: 46  SSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVL-TALISMYCKCGLVEDA 104

Query: 152 RRVFNKIDNGKVF--IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-----SCV 204
           R+VF +  +       +N L+  Y+      ++ ++F++M+  G++ DS T       C 
Sbjct: 105 RKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCT 164

Query: 205 LKCLAVVGNSRR---------------------------VKDAHKLFDELSDRDVVSWNC 237
           +     +G S                             V+   +LFDE+  + +++WN 
Sbjct: 165 VPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNA 224

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +ISGY  NG+A   LE+F++M + G   D  T+V+VLS CA+ GA   G+ V        
Sbjct: 225 VISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANG 284

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F+  +  +N L+ MY++CG+L  A  VF+ M  +S+VSWT+MI  Y   G+ +  + LF 
Sbjct: 285 FAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFD 344

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKC 416
            M++ GI PD      +L AC+  GL + G ++   +K E  ++      + L+D+  + 
Sbjct: 345 DMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRA 404

Query: 417 GSMADAESVFNQMPVK-DIVSWNTMIGA---------LDLFVAMLQNFEP 456
           G + +A    + MPV+ D   W  ++GA          +L  A +  FEP
Sbjct: 405 GRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEP 454


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/593 (36%), Positives = 347/593 (58%), Gaps = 13/593 (2%)

Query: 250 KGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           + LE+F+ + LN  +++D  T   ++S C    ++   + V  + + +    +    N +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           L M+ KCG +  A R+F++M E++++SW ++I G    G +  A RLF  M +   +   
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGS 232

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               +++ A A  GL+  G+ +H    +  +   ++V+ AL+DMY+KCGS+ DA+ VF+Q
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ 292

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERG 477
           MP K  V WN++I           AL ++  M  +  + D  T + I+  CA LA+LE  
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           ++ H  ++RHG   D     A+VD+Y K G +  A+ +FDM+P K++ISW  +IAGYG H
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G G +A+  F  M   G+ P+ V+F++VL ACS+SGL D GW  F  M  +  I+P+  H
Sbjct: 413 GRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMH 472

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           YACM++LL R G L EA+  I+  P  P   +W +LL  CR+H   +L +  AE ++ + 
Sbjct: 473 YACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMG 532

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           P+    YV+L N+Y  + + EE   + + + RRGL+  P CSWIEIK +   F++G   H
Sbjct: 533 PEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCH 592

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
             +K+I   L  L LE+ + GY P+ ++ L + DE E+ V L  HSEKLA+AFG++N   
Sbjct: 593 AQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQEERVLLY-HSEKLAIAFGLINTSD 651

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              +++ ++ R+CGDCH   K ++   RREIV+RD++RFHHFKDG CSC  +W
Sbjct: 652 WTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 206/413 (49%), Gaps = 29/413 (7%)

Query: 185 LFKKMQSLGIAADSYTFSCVL----KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
           +F  M + G+  D Y  + VL    KC  ++       DA +LFDE+ +++++SWN +I 
Sbjct: 153 VFNYMINSGLDPDEYLRNRVLLMHVKCGMMI-------DARRLFDEMPEKNILSWNTIIG 205

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G +  G   +   +F  M     +      VT++   A  G +  GR +H+ +LK     
Sbjct: 206 GLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGG 265

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++     L+DMYSKCG ++ A  VF++M E++ V W S+IAGYA  G  + A+ ++  M 
Sbjct: 266 DVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMR 325

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
             G++ D +  + I+  CA    LE  K  H  +  +     +  + AL+D+Y+K G + 
Sbjct: 326 DSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIE 385

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACA 469
           DA+ VF+ MP K+++SWN +I           A+++F  ML +   P+ VT   +L AC+
Sbjct: 386 DAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACS 445

Query: 470 SLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-W 527
                +RG EI   + R H I         ++++  + G+L  A +L    P K  ++ W
Sbjct: 446 YSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMW 505

Query: 528 TIMIAGYGMH-GFGCDAIATFNDMRQAGIEPDEVS-FISVLYACSHSGLVDEG 578
             ++    +H  F    +  F   +  G+ P+++S ++ +L   + SG ++E 
Sbjct: 506 AALLTACRVHKNF---ELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEA 555



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/405 (21%), Positives = 172/405 (42%), Gaps = 81/405 (20%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  IG   + G+  +A  +     +  S   ++ + ++++  A L  +  G+++HS  
Sbjct: 199 SWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCS 258

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G V  D  +   L+ M+  CG +++ + VF+++       WN ++  Y+  G  +E+
Sbjct: 259 LKTG-VGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEA 317

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC-----------------------LAVVGNSR---- 215
           L ++ +M+  G+  D++TFS +++                        L +V N+     
Sbjct: 318 LSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDL 377

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R++DA  +FD +  ++V+SWN +I+GY  +G   + +E+F+ ML+ G   +  T 
Sbjct: 378 YSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTF 437

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG- 329
           + VLS C                                   S  G  D    +FE M  
Sbjct: 438 LAVLSAC-----------------------------------SYSGLSDRGWEIFESMSR 462

Query: 330 ----ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
               +   + +  MI    REG+ D A  L +       +P V    ++L AC      E
Sbjct: 463 DHKIKPRAMHYACMIELLGREGLLDEAFALIKD---APFKPTVNMWAALLTACRVHKNFE 519

Query: 386 IGKDVHDYIKENDMQS-SLYVSNALMDMYAKCGSMADAESVFNQM 429
           +GK   + +     +  S YV   L+++Y   G + +A +V   +
Sbjct: 520 LGKFAAEKLYGMGPEKLSNYV--VLLNIYNXSGRLEEAAAVIQTL 562


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/680 (35%), Positives = 370/680 (54%), Gaps = 54/680 (7%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
            FI N L++ Y+K+G    +  LF +M       D+++++ +L   A  G    V+D   
Sbjct: 58  TFIHNRLLNLYAKSGEISHARKLFDEMTQ----RDNFSWNAMLSLYAKSG---LVEDLRV 110

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +FD +  RD VS+N +ISG+  NG     L VF  M   G      T V+VL+ C     
Sbjct: 111 IFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLD 170

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  G+ +H   +       +   N L D+Y++CG++D A R+F++M  R+VV+W  MI+G
Sbjct: 171 LRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISG 230

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           Y +    +  I LF  M    ++PD    +S+L A                         
Sbjct: 231 YLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA------------------------- 265

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML- 451
                     Y + G + +A  VF ++  KD V W  MI           AL LF  ML 
Sbjct: 266 ----------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLL 315

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
           +N  PDG T++ ++ +CA LA+L  G+ +HG     G++ D  V++A+VDMY KCGV   
Sbjct: 316 ENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRD 375

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A ++F  +  ++++SW  MI GY ++G   +A++ + +M +  ++PD V+F+ VL AC H
Sbjct: 376 AWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVH 435

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           +GLV+EG  +F  M  +  +EP  +HYACMV+L  R+G++ +A   I  M   P++ IW 
Sbjct: 436 AGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWT 495

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           ++L  C +  ++K  E  A  + EL P N   Y++L+N+YA   +W++V  +R  +  + 
Sbjct: 496 TVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKH 555

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
           +KK    SWIEI  +V+ FVA   +HP AK I   L RL  +++  G+ P T   L +  
Sbjct: 556 VKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTNLVLHDFG 615

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQT-IRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           E EK  ++  HSEKLA+A+G++  P G T IR+ KN+R C DCH   KF+S   RR ++L
Sbjct: 616 EDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCADCHIFMKFVSNITRRPVIL 675

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RDSNRFHHF +G+CSC+ +W
Sbjct: 676 RDSNRFHHFVEGKCSCKDYW 695



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 187/383 (48%), Gaps = 12/383 (3%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHS-- 120
           +YN  I  F   G    A+ V    +K   K    T+ S+L  C  L  L  GK++H   
Sbjct: 122 SYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRI 181

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           IIC  G    +  + + L  ++  CG++ + RR+F+++    V  WNL++  Y K    +
Sbjct: 182 IICNLG---GNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPE 238

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
           + + LF +MQ   +  D  T S VL      G    + +A K+F E+ ++D V W  MI 
Sbjct: 239 KCIDLFHEMQVSNLKPDQVTASSVLGAYIQAG---YIDEARKVFGEIREKDEVCWTIMIV 295

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G   NG  E  L +F EML      D  T+ +V+S CA   +L  G+ VH  A     + 
Sbjct: 296 GCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVND 355

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++  ++ L+DMY KCG    A  +F  M  R+VVSW SMI GYA  G    A+ L+  M+
Sbjct: 356 DLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENML 415

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVH-DYIKENDMQSSLYVSNALMDMYAKCGSM 419
            E ++PD      +L AC   GL+E GK+       ++ ++ +      +++++ + G M
Sbjct: 416 EENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHM 475

Query: 420 ADAESVFNQMPVK-DIVSWNTMI 441
             A  + + M  + + + W T++
Sbjct: 476 DKAVDLISSMSQEPNSLIWTTVL 498



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 15/221 (6%)

Query: 74  CEVGNLEKAMEVLYSS---EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
           C     E+   +L+S    E ++ D  T  S++  CA L SL  G+ VH      G V D
Sbjct: 297 CAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMG-VND 355

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D ++ S LV M+  CG  ++   +F+ +    V  WN ++  Y+  G   E+L L++ M 
Sbjct: 356 DLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENML 415

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIAN 245
              +  DS TF  VL      G    V++  + F  +SD+  +      + CM++ +  +
Sbjct: 416 EENLKPDSVTFVGVLSACVHAG---LVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRS 472

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           G  +K +++   M       +     TVLS C   G +  G
Sbjct: 473 GHMDKAVDLISSMSQ---EPNSLIWTTVLSVCVMKGDIKHG 510



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 46/235 (19%)

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDM-------------------------------IP 520
           D  + N ++++Y K G +  AR LFD                                +P
Sbjct: 57  DTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMP 116

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
           ++D +S+  +I+G+  +G G  A+  F  M++ G++P E + +SVL AC+    +  G +
Sbjct: 117 SRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQ 176

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
               +   CN+   +     + DL +R G + +A R  + M V  +   W  ++ G   +
Sbjct: 177 IHGRIII-CNLGGNVFVCNALTDLYARCGEIDQARRLFDRM-VIRNVVTWNLMISG---Y 231

Query: 641 HEVKLAEKVAE-----HVFELEPDNTGYYVLLANVYAEAEKWEEVKK----LREK 686
            + +  EK  +      V  L+PD      +L   Y +A   +E +K    +REK
Sbjct: 232 LKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLG-AYIQAGYIDEARKVFGEIREK 285


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/627 (36%), Positives = 364/627 (58%), Gaps = 14/627 (2%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           + +A KLFDE+ +R +V+WN MIS +++ G  ++ +E++  ML  G   D  T   +   
Sbjct: 51  ITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKA 110

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNT-LLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            +  G    G+  H  A+   F     F  T ++DMY+K G +  A  VF+++ ++ VV 
Sbjct: 111 FSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVL 170

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           +T++I GY + G+   A+ +F  MV   I+P+ Y + S+L +C   G L  GK +H  + 
Sbjct: 171 FTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVV 230

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           ++ ++S +    +L+ MY+KC  + D+  VFN +     V+W + I           AL 
Sbjct: 231 KSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALS 290

Query: 446 LFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           +F  M++ +  P+  T + IL AC+SLA LE G +IH   ++ G+  ++ V  A++ +Y 
Sbjct: 291 MFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYG 350

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG +  ARS+F+ +   D++S   MI  Y  +GFG +A+  F  M++ G +P+ V+FIS
Sbjct: 351 KCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFIS 410

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           +L AC+++GLV+EG + F+++R   +IE   +HY CM+DLL R     EA   IE     
Sbjct: 411 ILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-N 469

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           PD   W +LL  C+IH EV++AEK  + + +  P + G ++LL N+YA A KW+ V +++
Sbjct: 470 PDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMK 529

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
                  LKK P  SW++I  +V+ F+AG  SHP A +I  +L  L  ++   GY P T+
Sbjct: 530 SAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTK 589

Query: 745 YALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT-IRVTKNLRVCGDCHEMAKFMSKT 803
           + L + +E +K  AL  HSEKLA+AF +       T IR+ KNLRVCGDCH   KF+S  
Sbjct: 590 FVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLL 649

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             R+I+ RD+ RFHHFK G CSC+ +W
Sbjct: 650 TGRDIIARDAKRFHHFKGGICSCKDYW 676



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 239/485 (49%), Gaps = 47/485 (9%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           Y S++    + KSL   K +H+ I +SG +      G KL+  ++ C  + E R++F+++
Sbjct: 4   YTSLIAQFTNKKSLTTLKSLHTHILKSGSLF--SFFGHKLIDGYIKCSVITEARKLFDEM 61

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR--- 215
            N  +  WN ++  +   G  KE++ L+  M   G+  D+YTFS + K  + +G SR   
Sbjct: 62  PNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQ 121

Query: 216 ------------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                                         ++KDA  +FD + D+DVV +  +I GY   
Sbjct: 122 KAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQR 181

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
           G+  + LEVF++M+      +  T+ +VL  C N G L+ G+ +H   +K+     ++  
Sbjct: 182 GLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQ 241

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
            +LL MYSKC  ++ +I+VF  +   S V+WTS I G  + G  + A+ +FR M+R  I 
Sbjct: 242 TSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSIS 301

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P+ +  +SILHAC+   +LE G+ +H    +  +  + YV  AL+ +Y KCG++  A SV
Sbjct: 302 PNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSV 361

Query: 426 FNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAAL 474
           F  +   D+VS NTMI           AL+LF  M +   +P+ VT   IL AC +   +
Sbjct: 362 FESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLV 421

Query: 475 ERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           E G +I   I   H I   R+    ++D+  +      A  L +     D+I W  ++  
Sbjct: 422 EEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNA 481

Query: 534 YGMHG 538
             +HG
Sbjct: 482 CKIHG 486



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 189/417 (45%), Gaps = 41/417 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSS---EKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            +N+ I      G  ++A+E LY +   E    D  T+ +I +  +++    +G+K H +
Sbjct: 68  TWNSMISSHVSRGKTKEAIE-LYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGL 126

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
               G  + DG + + +V M+   G +K+ R VF+++ +  V ++  L+  Y++ G   E
Sbjct: 127 AVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGE 186

Query: 182 SLYLFKKMQSLGIAADSYTFSCVL--------------------------------KCLA 209
           +L +F+ M    I  + YT + VL                                  L 
Sbjct: 187 ALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLT 246

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           +      V+D+ K+F+ L+    V+W   I G + NG  E  L +F+EM+    + +  T
Sbjct: 247 MYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFT 306

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
             ++L  C++   L  G  +HA  +K         +  L+ +Y KCG+++ A  VFE + 
Sbjct: 307 FSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLT 366

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           E  VVS  +MI  YA+ G    A+ LF  M + G +P+V    SIL AC   GL+E G  
Sbjct: 367 ELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQ 426

Query: 390 VHDYIKEN---DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
           +   I+ N   ++    Y    ++D+  +     +A  +  +    D++ W T++ A
Sbjct: 427 IFSLIRNNHSIELTRDHY--TCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNA 481



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 38/198 (19%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG--VLGSKLVFMFVTCGDLKEGRRVF 155
           T+ SIL  C+ L  LE G+++H++  + G+   DG   + + L+ ++  CG++++ R VF
Sbjct: 306 TFSSILHACSSLAMLEAGEQIHAVTVKLGV---DGNKYVDAALIHLYGKCGNVEKARSVF 362

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKC------- 207
             +    V   N +++ Y++ G   E+L LF++M+ LG   +  TF S +L C       
Sbjct: 363 ESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVE 422

Query: 208 -------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                    + ++G ++R ++A  L +E  + DV+ W  +++  
Sbjct: 423 EGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNAC 482

Query: 243 IANGVAEKGLEVFKEMLN 260
             +G  E   +  K+ML+
Sbjct: 483 KIHGEVEMAEKFMKKMLD 500



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 82/160 (51%), Gaps = 4/160 (2%)

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           + +H +IL+ G S      + ++D Y+KC V+  AR LFD +P + +++W  MI+ +   
Sbjct: 21  KSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G   +AI  +++M   G+ PD  +F ++  A S  G+  EG +   +       E     
Sbjct: 80  GKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVV-LGFEVSDGF 138

Query: 598 YAC-MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            A  +VD+ ++ G + +A RF+    +  D  ++ +L+ G
Sbjct: 139 VATGIVDMYAKFGKMKDA-RFVFDRVLDKDVVLFTALIVG 177


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/551 (39%), Positives = 323/551 (58%), Gaps = 46/551 (8%)

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           +F+ +    V  W + +  +A       AI LF  +    I PD Y  + +L AC+   L
Sbjct: 69  IFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACS--RL 126

Query: 384 LEI--GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
           L++  GK VH Y+++  +QS++++ N ++ +YA CG +  A  VF++MP +D+++WN MI
Sbjct: 127 LDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMI 186

Query: 442 G-----------------------------------------ALDLFVAMLQ-NFEPDGV 459
                                                     A+DLF+ M      P+ V
Sbjct: 187 ARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEV 246

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           T+  +L ACA +  L  GR IH +  R G   +  V N ++DMYVKCG L  A  +FD +
Sbjct: 247 TVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNM 306

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
             + ++SW+ MIAG   HG   DA+A FN M   G++P+ V+FI +L+ACSH G+V++G 
Sbjct: 307 EERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGR 366

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
           ++F  M  +  I P++EHY CMVDL SR G L EA+ FI  MP+AP+  +WG+LL GC++
Sbjct: 367 KYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKV 426

Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
           H  +KLAE+   H+ +L+P N GYYV+L+N+YAEA +WE+V ++R+ +  RG+KK PG S
Sbjct: 427 HKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWS 486

Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
            I ++G V  FVAG  +HP  ++I    ++L   MK +GY P T   L++ +E +KE  L
Sbjct: 487 SIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFL 546

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
             HSEKLA+ FG++    G  IR+ KNLRVC DCH   K +S  + REIV+RD NRFH F
Sbjct: 547 YRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCF 606

Query: 820 KDGRCSCRGFW 830
           K+G CSC  +W
Sbjct: 607 KNGSCSCGDYW 617



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 216/442 (48%), Gaps = 56/442 (12%)

Query: 15  FSPP---NQSYGKKFASYKP-STLPIIVSSKSHSSCTINPISASISKTL-----VCKTKN 65
           F+ P    Q +     +  P S+LP+   S+  S C  N  S S +K +       +  +
Sbjct: 25  FTSPFELKQLHAHLLKTNSPLSSLPL---SRVASVCAFNS-SFSYAKLIFQLLDASEVTH 80

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTY-CS-ILQLCADLKSLEDGKKVHSIIC 123
           +N  +  F E  +   A+ + Y   +  I    Y CS +L+ C+ L  + +GK VH  + 
Sbjct: 81  WNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVE 140

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G+   +  L + +V ++  CG++   R+VF+K+    V  WN+++    K G+     
Sbjct: 141 KLGLQ-SNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGD----- 194

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                             + A+KLF E+ +R+V SW  MI GY 
Sbjct: 195 ---------------------------------AEGAYKLFAEMPERNVRSWTSMIGGYA 221

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
             G +++ +++F EM + G   +  T+V VL  CA+ G L+ GR +H F+ ++ + K I 
Sbjct: 222 QCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIR 281

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             NTL+DMY KCG L+ A R+F+ M ER+VVSW++MIAG A  G  + A+ LF  M+  G
Sbjct: 282 VCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTG 341

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVH-DYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           ++P+      ILHAC+  G++E G+       ++  +   +     ++D++++ G + +A
Sbjct: 342 VKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEA 401

Query: 423 ESVFNQMPV-KDIVSWNTMIGA 443
                 MP+  + V W  ++G 
Sbjct: 402 HEFIMNMPIAPNGVVWGALLGG 423



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 190/400 (47%), Gaps = 51/400 (12%)

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
            + +F  +D  +V  WN  +  +++  +  +++ LF +++   I+ D YT S VLK  + 
Sbjct: 66  AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
           + + R  K  H                   GY+             E L L  N+ L  M
Sbjct: 126 LLDVRNGKIVH-------------------GYV-------------EKLGLQSNMFLQNM 153

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           +  L   A CG +   R V          +++   N ++    K GD +GA ++F +M E
Sbjct: 154 IVHLY--ALCGEIGVARKV----FDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPE 207

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R+V SWTSMI GYA+ G    AI LF  M   G+ P+   + ++L ACA  G L +G+ +
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRI 267

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           HD+   +  + ++ V N L+DMY KCG + DA  +F+ M  + +VSW+ MI         
Sbjct: 268 HDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRA 327

Query: 443 --ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANA 498
             AL LF  M+    +P+ VT   IL AC+ +  +E+GR+    + R +GI         
Sbjct: 328 EDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGC 387

Query: 499 IVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
           +VD++ + G+L  A      +P A + + W  ++ G  +H
Sbjct: 388 MVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVH 427



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 56/301 (18%)

Query: 388 KDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----- 441
           K +H ++ K N   SSL +S  +  + A   S + A+ +F  +   ++  WNT +     
Sbjct: 32  KQLHAHLLKTNSPLSSLPLSR-VASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAE 90

Query: 442 -----GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 A+ LF  + + +  PD  T + +L AC+ L  +  G+ +HGY+ + G+ ++  +
Sbjct: 91  GDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFL 150

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA----------------------- 532
            N IV +Y  CG + +AR +FD +P +D+I+W IMIA                       
Sbjct: 151 QNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNV 210

Query: 533 --------GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR---F 581
                   GY   G   +AI  F +M  AG+ P+EV+ ++VL AC+  G +  G R   F
Sbjct: 211 RSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDF 270

Query: 582 FNMMRYECNIEPKLEHYAC--MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
            N   YE NI        C  ++D+  + G L +A R  + M        W +++ G   
Sbjct: 271 SNRSGYEKNIR------VCNTLIDMYVKCGCLEDACRIFDNME-ERTVVSWSAMIAGLAA 323

Query: 640 H 640
           H
Sbjct: 324 H 324



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 143/305 (46%), Gaps = 40/305 (13%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
            +++ + IG + + G  ++A+++    E + +  +  T  ++L  CAD+ +L  G+++H 
Sbjct: 210 VRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHD 269

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
               SG   +  V  + L+ M+V CG L++  R+F+ ++   V  W+ ++   +  G  +
Sbjct: 270 FSNRSGYEKNIRVCNT-LIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAE 328

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVS----W 235
           ++L LF KM + G+  ++ TF  +L   + +G    V+   K F  ++ D  +V     +
Sbjct: 329 DALALFNKMINTGVKPNAVTFIGILHACSHMG---MVEKGRKYFASMTRDYGIVPRIEHY 385

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH---AF 292
            CM+  +   G+ ++  E          N+ +A    V       GAL+ G  VH     
Sbjct: 386 GCMVDLFSRAGLLQEAHEFI-------MNMPIAPNGVVW------GALLGGCKVHKNIKL 432

Query: 293 ALKAC--FSKEISFNN----TLLDMYSKCGDLDGAIRVFEKMGERSV---VSWTSMIAGY 343
           A +A    SK    N+     L ++Y++ G  +   RV + M +R V     W+S++   
Sbjct: 433 AEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMV-- 490

Query: 344 AREGV 348
             EGV
Sbjct: 491 --EGV 493


>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/601 (37%), Positives = 345/601 (57%), Gaps = 42/601 (6%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
            +L  C    ++  G+ +H+    +  S +   +N LL++YSK G+L  A+ +F++M  R
Sbjct: 74  NLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRR 133

Query: 332 SVVS-------------------------------WTSMIAGYAREGVFDGAIRLFRGMV 360
           +++S                               W +M+ G  +  + + A+ LF  M 
Sbjct: 134 NIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMN 193

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
                PD Y++ S+L  CA  G L  G+ VH Y+ +   + +L V  +L  MY K GSM 
Sbjct: 194 ELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMH 253

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACA 469
           D E V N MP   +V+WNT++          G LD +  M +  F PD +T   ++ +C+
Sbjct: 254 DGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCS 313

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            LA L +G++IH   ++ G S++ +V +++V MY +CG L  +   F     +D++ W+ 
Sbjct: 314 ELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSS 373

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           MIA YG HG G +AI  FN+M Q  +  +E++F+S+LYACSH GL D+G   F+MM  + 
Sbjct: 374 MIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKY 433

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            ++ +L+HY C+VDLL R+G L EA   I  MPV  DA IW +LL  C+IH   ++A +V
Sbjct: 434 GLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRV 493

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           A+ V  ++P ++  YVLLAN+Y+ A +W+ V ++R  +  + +KK PG SW+E+K +V+ 
Sbjct: 494 ADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQ 553

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F  G   HP   +I   L+ L  E+KR+GY P T   L + D  EKE  L  HSEKLA+A
Sbjct: 554 FHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIA 613

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           F ++N P G  IRV KNLRVC DCH   K++S+  + EI++RDS+RFHHFK+G CSC  +
Sbjct: 614 FALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCGDY 673

Query: 830 W 830
           W
Sbjct: 674 W 674



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 231/484 (47%), Gaps = 54/484 (11%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           N +    C  G++ +A E   S   +  + + + ++LQ C  LKS+  GK++HS+I  SG
Sbjct: 42  NEQFATLCSKGHIREAFESFLSEIWA--EPRLFSNLLQACIPLKSVSLGKQLHSLIFTSG 99

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
              D                                 FI N L++ YSK G  + ++ LF
Sbjct: 100 CSSDK--------------------------------FISNHLLNLYSKFGELQAAVALF 127

Query: 187 KKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
            +M    I       SC +   A +G    ++ A  LFDE+ DR+V +WN M++G     
Sbjct: 128 DRMPRRNI------MSCNIMIKAYLGMGN-LESAKNLFDEMPDRNVATWNAMVTGLTKFE 180

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           + E+ L +F  M  L F  D  ++ +VL GCA+ GAL+ G+ VHA+ +K  F   +    
Sbjct: 181 MNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGC 240

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           +L  MY K G +    RV   M + S+V+W ++++G A++G F+G +  +  M   G  P
Sbjct: 241 SLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRP 300

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D     S++ +C+   +L  GK +H    +    S + V ++L+ MY++CG + D+   F
Sbjct: 301 DKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTF 360

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALE 475
            +   +D+V W++MI           A+ LF  M Q N   + +T   +L AC+     +
Sbjct: 361 LECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKD 420

Query: 476 RGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
           +G  +   ++ ++G+ A       +VD+  + G L  A ++   +P K D I W  +++ 
Sbjct: 421 KGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSA 480

Query: 534 YGMH 537
             +H
Sbjct: 481 CKIH 484


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/605 (37%), Positives = 346/605 (57%), Gaps = 16/605 (2%)

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           IS   +NG  +   E   EM+ LG  +       +L+ C +  AL  G+ VHA  +K  +
Sbjct: 26  ISQLCSNGRLQ---EALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRY 82

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
                    LL  Y KC  L+ A +V ++M E++VVSWT+MI+ Y++ G    A+ +F  
Sbjct: 83  LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAE 142

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M+R   +P+ +   ++L +C     L +GK +H  I + +  S ++V ++L+DMYAK G 
Sbjct: 143 MMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 202

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPA 467
           + +A  +F  +P +D+VS   +I           AL++F  +  +   P+ VT A +L A
Sbjct: 203 IEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTA 262

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
            + LA L+ G++ H ++LR  +     + N+++DMY KCG L  A+ LFD +P +  ISW
Sbjct: 263 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISW 322

Query: 528 TIMIAGYGMHGFGCDAIATFNDMR-QAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MM 585
             M+ GY  HG G + +  F  MR +  ++PD V+ ++VL  CSH  + D G   ++ M+
Sbjct: 323 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMV 382

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
             E  I+P  EHY C+VD+L R G + EA+ FI+ MP  P A + GSLL  CR+H  V +
Sbjct: 383 AGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDI 442

Query: 646 AEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
            E V   + E+EP+N G YV+L+N+YA A +WE+V  +R  + ++ + K PG SWI+ + 
Sbjct: 443 GEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQ 502

Query: 706 KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEK 765
            ++ F A   +HP  +++ + +K + ++MK+ GY P     L + DE +KE  L GHSEK
Sbjct: 503 TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEK 562

Query: 766 LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCS 825
           LA+ FG++    G  IRV KNLR+C DCH  AK  SK   RE+ LRD NRFH    G CS
Sbjct: 563 LALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVKGICS 622

Query: 826 CRGFW 830
           C  +W
Sbjct: 623 CGDYW 627



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 172/320 (53%), Gaps = 14/320 (4%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++DA K+ DE+ +++VVSW  MIS Y   G + + L VF EM+      +  T  TVL+ 
Sbjct: 102 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTS 161

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C     L  G+ +H   +K  +   I   ++LLDMY+K G ++ A  +FE + ER VVS 
Sbjct: 162 CIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSC 221

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T++IAGYA+ G+ + A+ +F+ +  EG+ P+     S+L A +   LL+ GK  H ++  
Sbjct: 222 TAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLR 281

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDL 446
            ++     + N+L+DMY+KCG+++ A+ +F+ MP +  +SWN M+            L+L
Sbjct: 282 RELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL 341

Query: 447 FVAML--QNFEPDGVTMACILPACASLAALERGREIHGYIL--RHGISADRNVANAIVDM 502
           F  M   +  +PD VT+  +L  C+     + G  I+  ++   +GI  D      IVDM
Sbjct: 342 FRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDM 401

Query: 503 YVKCGVLVLARSLFDMIPAK 522
             + G +  A      +P+K
Sbjct: 402 LGRAGRIDEAFEFIKRMPSK 421



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 201/412 (48%), Gaps = 42/412 (10%)

Query: 70  IGRFCEVGNLEKAM--EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I + C  G L++A+   V+   E   I    Y ++L  C D ++L +G++VH+ + ++  
Sbjct: 26  ISQLCSNGRLQEALLEMVMLGPE---IGFHCYDALLNACLDKRALREGQRVHAHMIKTR- 81

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
            +    L ++L+  +  C  L++ R+V +++    V  W  ++  YS+TG+  E+L +F 
Sbjct: 82  YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFA 141

Query: 188 KMQSLGIAADSYTFSCVL-KCLAVVG-------------------------------NSR 215
           +M       + +TF+ VL  C+   G                                + 
Sbjct: 142 EMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 201

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           ++++A ++F+ L +RDVVS   +I+GY   G+ E+ LE+F+ + + G   +  T  ++L+
Sbjct: 202 QIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLT 261

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
             +    L  G+  H   L+          N+L+DMYSKCG+L  A R+F+ M ER+ +S
Sbjct: 262 ALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAIS 321

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           W +M+ GY++ G+    + LFR M  E  ++PD   + ++L  C+   + + G  ++D +
Sbjct: 322 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGM 381

Query: 395 --KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
              E  ++        ++DM  + G + +A     +MP K       +++GA
Sbjct: 382 VAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGA 433



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 143/322 (44%), Gaps = 46/322 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A I R+ + G+  +A+ V     +S  K +  T+ ++L  C     L  GK++H +I
Sbjct: 119 SWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLI 178

Query: 123 C----ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
                +S I +     GS L+ M+   G ++E R +F  +    V     ++  Y++ G 
Sbjct: 179 VKWNYDSHIFV-----GSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGL 233

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCL------------------------AVVGNS 214
            +E+L +F+++QS G+  +  T++ +L  L                        AV+ NS
Sbjct: 234 DEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 293

Query: 215 R--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNV 265
                     +  A +LFD + +R  +SWN M+ GY  +G+  + LE+F+ M +      
Sbjct: 294 LIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 353

Query: 266 DLATMVTVLSGCANCGALMFGRAVH--AFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
           D  T++ VLSGC++      G +++    A +     +      ++DM  + G +D A  
Sbjct: 354 DAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFE 413

Query: 324 VFEKMGERSVVSWTSMIAGYAR 345
             ++M  +        + G  R
Sbjct: 414 FIKRMPSKPTAGVLGSLLGACR 435


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/718 (34%), Positives = 378/718 (52%), Gaps = 43/718 (5%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           TK+YNA I R    G     +    S  S  +  D  T+ S+++ C  L     G   H 
Sbjct: 13  TKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQ 72

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            +   G    D  + + L+  +   G  +  R+VF+ +D+  V  W  ++  Y++ G   
Sbjct: 73  RVIVDGYS-SDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHD 131

Query: 181 ESLYLFKKMQSLGIAADSYT-------------FSCVLKCLAVVG--------NSR---- 215
            +  ++  M+  GI   S T               C+  C+   G        NS     
Sbjct: 132 VAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVY 191

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
               RV+DA  LF+ +  RDV+SWN ++SGY   G   + L++   M   G   D  T  
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +++S  A    L  G+ VH   L+A   ++     +L+ MY KCG+++ A R+FE M  +
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            V+SWT+MI+G  +    D A+ +FR M++  + P    I S+L ACA  G   +G  VH
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
            YI    ++  +   N+L+ MYAKCG +  + SVF++M  +DIVSWN ++          
Sbjct: 372 GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLC 431

Query: 443 -ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            AL LF  M +  + PD +T+  +L ACAS+ AL +G+ IH ++ +  +     +  A+V
Sbjct: 432 KALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALV 491

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY KCG L  A+  FD +P +DL+SW+ +IAGYG HG G  A+  ++D    GI+P+ V
Sbjct: 492 DMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHV 551

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
            ++S+L ACSH+GLVD+G  FF+ M  +  IEP+LEH AC+VDLLSR G + EAY F + 
Sbjct: 552 IYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKR 611

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           M   P   + G LL  CR    V+L + VA  +  L+P N G YV LA+ YA  ++W+ V
Sbjct: 612 MFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGV 671

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
            ++  ++    LKK PG S+IE+ G +  F    SSHP  ++I  +LK L  EM++ G
Sbjct: 672 GEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIMLVLKILGSEMRKVG 729


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/570 (37%), Positives = 342/570 (60%), Gaps = 12/570 (2%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  CA   + M GRA HA  ++     +I  +N L++MYSKC  +D A + F +M  +S
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           +VSW ++I    +      A++L   M REG   + + I+S+L  CA    +     +H 
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
           +  +  + S+ +V  AL+ +YAKC S+ DA  +F  MP K+ V+W++M+           
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228

Query: 443 ALDLFV-AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           AL +F  A L  F+ D   ++  + ACA LA L  G+++H    + G  ++  V+++++D
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLID 288

Query: 502 MYVKCGVLVLARSLFD-MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           MY KCG +  A  +F  ++  + ++ W  MI+G+  H    +A+  F  M+Q G  PD+V
Sbjct: 289 MYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDV 348

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +++ VL ACSH GL +EG ++F++M  + N+ P + HY+CM+D+L R G + +AY  IE 
Sbjct: 349 TYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIER 408

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP    +++WGSLL  C+I+  ++ AE  A+++FE+EP+N G ++LLAN+YA  +KW+EV
Sbjct: 409 MPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEV 468

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            + R+ +    ++K  G SWIEIK K++ F  G  +HP    I + L  L +E+K+  Y 
Sbjct: 469 ARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYK 528

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
             T   L + +E  K++ L  HSEKLA+ FG++ LP    IR+ KNLR+CGDCH   K +
Sbjct: 529 VDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLV 588

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK+  REI++RD+NRFHHFKDG CSC  FW
Sbjct: 589 SKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 192/382 (50%), Gaps = 38/382 (9%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK-LVFMFVTCGDLKEGRRVFNKIDN 160
           +LQLCA  +S   G+  H+ I   G+ +D  +L S  L+ M+  C  +   R+ FN++  
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMD--ILTSNMLINMYSKCSLVDSARKKFNEMPV 106

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS-----CVLKC-------- 207
             +  WN ++   ++    +E+L L  +MQ  G   + +T S     C  KC        
Sbjct: 107 KSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQL 166

Query: 208 -------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                              L V      +KDA ++F+ + +++ V+W+ M++GY+ NG  
Sbjct: 167 HAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFH 226

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           E+ L +F+    +GF+ D   + + +S CA    L+ G+ VHA + K+ F   I  +++L
Sbjct: 227 EEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSL 286

Query: 309 LDMYSKCGDLDGAIRVFEKMGE-RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           +DMY+KCG +  A  VF+ + E RS+V W +MI+G+AR      A+ LF  M + G  PD
Sbjct: 287 IDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPD 346

Query: 368 VYAITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
                 +L+AC+  GL E G+   D  ++++++  S+   + ++D+  + G +  A  + 
Sbjct: 347 DVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLI 406

Query: 427 NQMPVKDIVS-WNTMIGALDLF 447
            +MP     S W +++ +  ++
Sbjct: 407 ERMPFNATSSMWGSLLASCKIY 428



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 176/336 (52%), Gaps = 14/336 (4%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V  A K F+E+  + +VSWN +I     N    + L++  +M   G   +  T+ +VL  
Sbjct: 94  VDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCN 153

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA   A++    +HAF++KA           LL +Y+KC  +  A ++FE M E++ V+W
Sbjct: 154 CAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTW 213

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           +SM+AGY + G  + A+ +FR     G + D + I+S + ACA    L  GK VH    +
Sbjct: 214 SSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHK 273

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQ-MPVKDIVSWNTMIG----------ALD 445
           +   S++YVS++L+DMYAKCG + +A  VF   + V+ IV WN MI           A+ 
Sbjct: 274 SGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMI 333

Query: 446 LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMY 503
           LF  M Q  F PD VT  C+L AC+ +   E G++    ++R H +S      + ++D+ 
Sbjct: 334 LFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDIL 393

Query: 504 VKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
            + G++  A  L + +P     S W  ++A   ++G
Sbjct: 394 GRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYG 429



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 111/229 (48%), Gaps = 15/229 (6%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSIIC 123
           +++ +  + + G  E+A+ +  +++    D   +   S +  CA L +L +GK+VH+I  
Sbjct: 213 WSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISH 272

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFIWNLLMHEYSKTGNFKES 182
           +SG    +  + S L+ M+  CG ++E   VF  + +   + +WN ++  +++     E+
Sbjct: 273 KSGFG-SNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEA 331

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSWNC 237
           + LF+KMQ  G   D  T+ CVL   + +G     ++  K FD +  +      V+ ++C
Sbjct: 332 MILFEKMQQRGFFPDDVTYVCVLNACSHMGLH---EEGQKYFDLMVRQHNLSPSVLHYSC 388

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           MI      G+  K  ++ + M    FN   +   ++L+ C   G + F 
Sbjct: 389 MIDILGRAGLVHKAYDLIERM---PFNATSSMWGSLLASCKIYGNIEFA 434


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/668 (34%), Positives = 375/668 (56%), Gaps = 45/668 (6%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFIWNLLMHEY 173
            K++H       +   D  L S L++M+ +CG   +  R+F ++ D G V  WN+++  +
Sbjct: 173 AKQIHGYSVRK-VFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGF 231

Query: 174 SKTGNFKESL--YLFKKMQSLGIAADSYT-------------FSCVLKC----------- 207
            + G ++ SL  YL  K +++ + + S+T             F   + C           
Sbjct: 232 GENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDP 291

Query: 208 ------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                 L +    + V+DA  +FD++S +    WN MIS Y+ NG +  GL+++K+M  L
Sbjct: 292 YVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVL 351

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               D  T   VLS C   G+  FGR +HA  +K      ++  + LL MYSKCG+ D A
Sbjct: 352 QIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDA 411

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F  +  R VV+W SMI+G+ +   +  A+  +  M   G +PD   + S++ AC   
Sbjct: 412 NSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGL 471

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             + +G  +H    ++ ++  ++V+++L+DMY+K      + +VF+ MP+K++V+WN++I
Sbjct: 472 KNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSII 531

Query: 442 G----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
                      ++ LF  M Q    PD V++  +L + +S+A L +G+ +HGY++R  I 
Sbjct: 532 SCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIP 591

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM 550
           +D  + NA++DMY+KCG L  A+ +F  +   +L++W IMIAG G HG    A++ F++M
Sbjct: 592 SDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEM 651

Query: 551 RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGN 610
           R  GI PD+++FIS+L +C+H G ++EG + F +M  E  IEP++EHY  +VDLL R G 
Sbjct: 652 RSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGR 711

Query: 611 LSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
           L +AY F++ +P+ PD +IW SLLC CR+HH V+L +  A  + ++EP     YV L N+
Sbjct: 712 LDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNL 771

Query: 671 YAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL 730
           Y E E  +    LR  +  +GLKK PGCSWIE+   +++F +G SS P   +I  LL  L
Sbjct: 772 YGENELQDRAANLRASMKEKGLKKTPGCSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSL 831

Query: 731 RLEMKREG 738
           R  M+++G
Sbjct: 832 RRNMRKKG 839



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 239/501 (47%), Gaps = 47/501 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEV--LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  IG F E G  E ++EV  L  +E  K+ + ++ S L  C   + +  G +VH  + 
Sbjct: 224 WNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLV 283

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G   +D  + + L+ M+  C  +++   VF+++   K  +WN ++  Y   G   + L
Sbjct: 284 KLGFE-NDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGL 342

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGN------------SRRVK------------- 218
            ++K+M+ L I  DS T + VL    +VG+             R ++             
Sbjct: 343 KIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMY 402

Query: 219 -------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                  DA+ +F+ +  RDVV+W  MISG+  N    + LE +  M   G   D   M 
Sbjct: 403 SKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMA 462

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +V+S C     +  G  +H  A+K+   +++   ++L+DMYSK      +  VF  M  +
Sbjct: 463 SVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLK 522

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           ++V+W S+I+ Y R G+ D +I LF  M + G+ PD  +ITS+L + +   +L  GK VH
Sbjct: 523 NLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVH 582

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
            Y+    + S L + NAL+DMY KCG +  A+ +F  M   ++V+WN MI          
Sbjct: 583 GYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWL 642

Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVANAI 499
            A+ LF  M      PD +T   +L +C     +E G ++   + + HGI         I
Sbjct: 643 KAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNI 702

Query: 500 VDMYVKCGVLVLARSLFDMIP 520
           VD+  + G L  A +    +P
Sbjct: 703 VDLLGRAGRLDDAYAFVKNLP 723



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 140/585 (23%), Positives = 259/585 (44%), Gaps = 82/585 (14%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           + +I    + G    A++  YS         TY S+L+ C  L +L+ GK +HS I   G
Sbjct: 21  DPKIVTLVQQGQYVDALQ-FYSRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKG 79

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
               D  + + L+                               + Y K G+F  ++ +F
Sbjct: 80  FFYSDPYITTSLI-------------------------------NFYFKCGSFGNAVKVF 108

Query: 187 KKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
            K+                                    E+S +DV  WN +++GY   G
Sbjct: 109 DKLPE---------------------------------SEVSGQDVTFWNSIVNGYFRFG 135

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
             ++G+  F  M   G   D  ++  +L   A+ G L + + +H ++++  F  +    +
Sbjct: 136 HKKEGIAQFCRMQLFGVRPDAYSLCILLG--ASDGHLGYAKQIHGYSVRKVFYGDPFLES 193

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
            L+ MY  CG    A R+F+++ ++ +VV+W  MI G+   G+++ ++ ++     E ++
Sbjct: 194 GLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVK 253

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
               + TS L AC     +  G  VH  + +   ++  YV  +L+ MY+KC  + DAE+V
Sbjct: 254 LVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENV 313

Query: 426 FNQMPVKDIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAAL 474
           F+Q+ VK    WN MI A          L ++  M +    PD +T   +L +C  + + 
Sbjct: 314 FDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSY 373

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           + GR IH  +++  I ++  + +A++ MY KCG    A S+F+ I  +D+++W  MI+G+
Sbjct: 374 DFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGF 433

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
             +    +A+  +N M   G +PD     SV+ AC+    V+ G     +   +  +E  
Sbjct: 434 CQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLA-IKSGLEQD 492

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL-CGCR 638
           +   + +VD+ S+      +      MP+  +   W S++ C CR
Sbjct: 493 VFVASSLVDMYSKFNFPKMSGNVFSDMPLK-NLVAWNSIISCYCR 536



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 182/408 (44%), Gaps = 36/408 (8%)

Query: 60  VCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKK 117
           V KT+ +NA I  +   G     +++    +  +I  D+ T  ++L  C  + S + G+ 
Sbjct: 319 VKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRL 378

Query: 118 VHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
           +H+ + +  I   +  L S L+ M+  CG+  +   +FN I    V  W  ++  + +  
Sbjct: 379 IHAELVKRPIQ-SNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNR 437

Query: 178 NFKESLYLFKKMQSLGIAADS---------------YTFSCVLKCLAVVGNSRR------ 216
            + E+L  +  M   G   DS                   C +  LA+     +      
Sbjct: 438 KYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVAS 497

Query: 217 -----------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                       K +  +F ++  +++V+WN +IS Y  NG+ +  + +F +M   G   
Sbjct: 498 SLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFP 557

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  ++ +VL   ++   L  G+AVH + ++     ++   N L+DMY KCG L  A  +F
Sbjct: 558 DSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIF 617

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           + M + ++V+W  MIAG    G +  A+ LF  M   GI PD     S+L +C   G +E
Sbjct: 618 QNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIE 677

Query: 386 IGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
            G  +   +  E+ ++  +     ++D+  + G + DA +    +P++
Sbjct: 678 EGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIE 725



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 176/402 (43%), Gaps = 32/402 (7%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEK---SKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           + + I  FC+     +A+E  Y+S      K D+    S++  C  LK++  G  +H + 
Sbjct: 426 WGSMISGFCQNRKYMEALE-FYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLA 484

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +SG+   D  + S LV M+      K    VF+ +    +  WN ++  Y + G    S
Sbjct: 485 IKSGLE-QDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLS 543

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK-LFDELSDRDVVSWNCMISG 241
           + LF +M   G+  DS + + VL  ++ V   R+ K  H  L  +    D+   N +I  
Sbjct: 544 ISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDM 603

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF--- 298
           YI  G  +    +F+ ML      +L T   +++GC + G  +  +A+  F     F   
Sbjct: 604 YIKCGFLKYAQHIFQNML----QTNLVTWNIMIAGCGSHGDWL--KAMSLFDEMRSFGIA 657

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-----ERSVVSWTSMIAGYAREGVFDGAI 353
             +I+F  +LL   + CG ++  +++F+ M      E  +  + +++    R G  D A 
Sbjct: 658 PDDITF-ISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAY 716

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGK-DVHDYIKENDMQSSLYVSNALMDM 412
              + +    IEPD     S+L +C     +E+GK   H  +     + S YV   L+++
Sbjct: 717 AFVKNL---PIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQ--LLNL 771

Query: 413 YAKCGSMADAESVFNQMPVKDI-----VSWNTMIGALDLFVA 449
           Y +      A ++   M  K +      SW  +  ++D+F +
Sbjct: 772 YGENELQDRAANLRASMKEKGLKKTPGCSWIEVGNSIDVFFS 813


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/615 (36%), Positives = 354/615 (57%), Gaps = 14/615 (2%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           R VV+W  +ISG + N      L  F  M       +  T   V    A+    + G+ +
Sbjct: 72  RTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQL 131

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           HA ALK     ++    +  DMYSK G    A  +F++M  R++ +W + ++   ++G  
Sbjct: 132 HALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRC 191

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             AI  F+  +    EP+     + L+ACA    LE+G+ +H +I  +  +  + V N L
Sbjct: 192 LDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGL 251

Query: 410 MDMYAKCGSMADAESVFNQMPV--KDIVSWNTMIGALD----------LFVAMLQNFEPD 457
           +D Y KCG +  +E VF+++    +++VSW +++ AL           +F+   +  EP 
Sbjct: 252 IDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPT 311

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
              ++ +L ACA L  LE GR +H   L+  +  +  V +A+VD+Y KCG +  A  +F 
Sbjct: 312 DFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFR 371

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA--GIEPDEVSFISVLYACSHSGLV 575
            +P ++L++W  MI GY   G    A++ F +M     GI    V+ +SVL ACS +G V
Sbjct: 372 EMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAV 431

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           + G + F  MR    IEP  EHYAC+VDLL R+G +  AY FI+ MP+ P  ++WG+LL 
Sbjct: 432 ERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLG 491

Query: 636 GCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
            C++H + KL +  AE +FEL+PD++G +V+ +N+ A A +WEE   +R+++   G+KKN
Sbjct: 492 ACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKN 551

Query: 696 PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEK 755
            G SW+ +K +V++F A  S H    +I+++L +LR EMK+ GY P    +L + +E EK
Sbjct: 552 VGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEK 611

Query: 756 EVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNR 815
              +  HSEK+A+AFG++ LP G  IR+TKNLR+C DCH   KF+SK   REI++RD+NR
Sbjct: 612 ASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNR 671

Query: 816 FHHFKDGRCSCRGFW 830
           FH FKDG CSC+ +W
Sbjct: 672 FHRFKDGWCSCKDYW 686



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 221/473 (46%), Gaps = 50/473 (10%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           G+ VH+ I  +        L + LV M+         + V +  +   V  W  L+    
Sbjct: 26  GRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCV 85

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV----------------GNSRRV- 217
               F  +L  F  M+   +  + +TF CV K  A +                GN   V 
Sbjct: 86  HNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVF 145

Query: 218 ---------------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                           +A  +FDE+  R++ +WN  +S  + +G     +  FK+ L + 
Sbjct: 146 VGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVD 205

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
              +  T    L+ CA+  +L  GR +H F +++ + +++S  N L+D Y KCGD+  + 
Sbjct: 206 GEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSE 265

Query: 323 RVFEKM--GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
            VF ++  G R+VVSW S++A   +    + A  +F    R+ +EP  + I+S+L ACA 
Sbjct: 266 LVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFL-QARKEVEPTDFMISSVLSACAE 324

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
            G LE+G+ VH    +  ++ +++V +AL+D+Y KCGS+  AE VF +MP +++V+WN M
Sbjct: 325 LGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAM 384

Query: 441 IGA------LDLFVAMLQNFEPDG-------VTMACILPACASLAALERGREIHGYIL-R 486
           IG       +D+ +++ Q             VT+  +L AC+   A+ERG +I   +  R
Sbjct: 385 IGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGR 444

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
           +GI         +VD+  + G++  A      +P    IS W  ++    MHG
Sbjct: 445 YGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHG 497



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 181/367 (49%), Gaps = 17/367 (4%)

Query: 284 MFGRAVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           + GRAVHA  L+   +   SF  N L++MYSK    + A  V      R+VV+WTS+I+G
Sbjct: 24  LLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISG 83

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
                 F  A+  F  M RE + P+ +    +  A A   +   GK +H    +      
Sbjct: 84  CVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILD 143

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------ALDLFVAMLQ--- 452
           ++V  +  DMY+K G   +A ++F++MP +++ +WN  +         LD   A  +   
Sbjct: 144 VFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLC 203

Query: 453 -NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
            + EP+ +T    L ACA + +LE GR++HG+I+R     D +V N ++D Y KCG +V 
Sbjct: 204 VDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVS 263

Query: 512 ARSLFDMIPA--KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
           +  +F  I +  ++++SW  ++A    +     A   F   R+  +EP +    SVL AC
Sbjct: 264 SELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSAC 322

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           +  G ++ G R  + +  +  +E  +   + +VDL  + G++  A +    MP   +   
Sbjct: 323 AELGGLELG-RSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMP-ERNLVT 380

Query: 630 WGSLLCG 636
           W +++ G
Sbjct: 381 WNAMIGG 387



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 177/388 (45%), Gaps = 48/388 (12%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+  + +  A L     GK++H++  + G ++D  V G     M+   G   E R +F++
Sbjct: 111 TFPCVFKASASLHMPVTGKQLHALALKGGNILDVFV-GCSAFDMYSKTGLRPEARNMFDE 169

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN---- 213
           + +  +  WN  M    + G   +++  FKK   +    ++ TF   L   A + +    
Sbjct: 170 MPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELG 229

Query: 214 --------SRRVKDAHKLFDELSD----------------------RDVVSWNCMISGYI 243
                     R ++   +F+ L D                      R+VVSW  +++  +
Sbjct: 230 RQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALV 289

Query: 244 ANGVAEKGLEVF----KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
            N   E+   VF    KE+    F +      +VLS CA  G L  GR+VHA ALKAC  
Sbjct: 290 QNHEEERACMVFLQARKEVEPTDFMIS-----SVLSACAELGGLELGRSVHALALKACVE 344

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
           + I   + L+D+Y KCG ++ A +VF +M ER++V+W +MI GYA  G  D A+ LF+ M
Sbjct: 345 ENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEM 404

Query: 360 VRE--GIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKC 416
                GI      + S+L AC+  G +E G  + + ++    ++        ++D+  + 
Sbjct: 405 TSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRS 464

Query: 417 GSMADAESVFNQMPVKDIVS-WNTMIGA 443
           G +  A     +MP+   +S W  ++GA
Sbjct: 465 GLVDRAYEFIKRMPILPTISVWGALLGA 492



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 149/380 (39%), Gaps = 88/380 (23%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+C+ L  CAD+ SLE G+++H  I  S    D  V    L+  +  CGD+     VF++
Sbjct: 212 TFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNG-LIDFYGKCGDIVSSELVFSR 270

Query: 158 IDNGK--VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR 215
           I +G+  V  W  L+    +    + +  +F + +   +    +  S VL   A +G   
Sbjct: 271 IGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARK-EVEPTDFMISSVLSACAELGGLE 329

Query: 216 RVKDAHKL--------------------------------FDELSDRDVVSWNCMISGYI 243
             +  H L                                F E+ +R++V+WN MI GY 
Sbjct: 330 LGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYA 389

Query: 244 ANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
             G  +  L +F+EM   + G  +   T+V+VLS C+  GA+  G               
Sbjct: 390 HLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERG--------------- 434

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS-----WTSMIAGYAREGVFDGAIRLF 356
                               +++FE M  R  +      +  ++    R G+ D   R +
Sbjct: 435 --------------------LQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVD---RAY 471

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM--DMYA 414
             + R  I P +    ++L AC   G  ++GK   + + E D   S    N ++  +M A
Sbjct: 472 EFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDS---GNHVVFSNMLA 528

Query: 415 KCGSMADAESVFNQMPVKDI 434
             G   +A  V  +M  +DI
Sbjct: 529 SAGRWEEATIVRKEM--RDI 546


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/611 (36%), Positives = 335/611 (54%), Gaps = 42/611 (6%)

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
            F +D  +  ++L   +   A   G  +H  A K  F  +      L+ MY+ C  +  A
Sbjct: 116 AFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDA 175

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F+KM     V+W  +I GY + G +D A+RLF  M    ++PD   + ++L AC   
Sbjct: 176 RLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHA 235

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM---------------------- 419
           G L  G+ +H+++K+N      ++  AL++MYA CG+M                      
Sbjct: 236 GNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAML 295

Query: 420 ---------ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGV 459
                     DA  +F+QM  +D+V W+ MI           AL LF  MLQ    PD +
Sbjct: 296 SGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQI 355

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           TM  ++ AC+ + AL +   IH Y+ R G     +V NA++DMY KCG LV AR +F+ +
Sbjct: 356 TMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENM 415

Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
           P K++ISW+ MI  + MHG    AI  F  M++  IEP+ V+FI VLYAC H+GLV+EG 
Sbjct: 416 PRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGE 475

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
           + F+ M  E  I P  EHY CMVDL  R   L +A   IE MP AP+  IWGSL+  C++
Sbjct: 476 KLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQV 535

Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
           H E +L E  A+ + ELEPD+ G  V+L+N+YA+ ++W +V  +R+ +S +G+ K    S
Sbjct: 536 HGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASS 595

Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
            IEI  +V++F+     H  + +I   L  +  ++K  GY P T   LI+ +E +K+  +
Sbjct: 596 RIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELV 655

Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
             HSEKLA+ +G+++      IR+ KNLR+C DCH   K +SK  + EIV+RD  RFHH 
Sbjct: 656 LWHSEKLAVCYGLISRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHC 715

Query: 820 KDGRCSCRGFW 830
             G CSCR +W
Sbjct: 716 SGGICSCRDYW 726



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 232/490 (47%), Gaps = 79/490 (16%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL-GIAADSYTFSCVLKC----- 207
           VF++I N      N L+   S++   +++++L+  ++++   A D ++F  +LK      
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 208 ---------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                      +A+  + RR+ DA  LFD++   D V+WN +I 
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY  NG  +  L +F++M +     D   + TVLS C + G L +GR +H F     ++ 
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255

Query: 301 EISFNNTLLDMYSKCGDLDGAIR-------------------------------VFEKMG 329
           +      L++MY+ CG +D A +                               +F++M 
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ER +V W++MI+GYA       A++LF  M+++   PD   + S++ AC+  G L     
Sbjct: 316 ERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANW 375

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H Y+  +    +L V+NAL+DMYAKCG++  A  VF  MP K+++SW++MI        
Sbjct: 376 IHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGN 435

Query: 443 ---ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVAN 497
              A+ LF  M + N EP+GVT   +L AC     +E G ++   ++  HGIS  R    
Sbjct: 436 ADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYG 495

Query: 498 AIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
            +VD+Y +   L  A  L + +P A ++I W  +++   +HG     +  F   R   +E
Sbjct: 496 CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEA--ELGEFAAKRLLELE 553

Query: 557 PDEVSFISVL 566
           PD    + VL
Sbjct: 554 PDHDGALVVL 563



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 190/382 (49%), Gaps = 43/382 (11%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  I  +C+ G+ + A+ +      S  K D+   C++L  C    +L  G+ +H  + 
Sbjct: 190 WNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVK 249

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           ++G  ID   L + L+ M+  CG +   R++++ + +  + +   ++  Y+K G      
Sbjct: 250 DNGYAIDSH-LQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLG------ 302

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                            VKDA  +FD++ +RD+V W+ MISGY 
Sbjct: 303 --------------------------------MVKDARFIFDQMIERDLVCWSAMISGYA 330

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            +   ++ L++F EML      D  TM++V+S C++ GAL     +H +  ++ F + +S
Sbjct: 331 ESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALS 390

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
            NN L+DMY+KCG+L  A  VFE M  ++V+SW+SMI  +A  G  D AI+LFR M    
Sbjct: 391 VNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVN 450

Query: 364 IEPDVYAITSILHACACDGLLEIGKDV-HDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           IEP+      +L+AC   GL+E G+ +    I E+ +  +      ++D+Y +   +  A
Sbjct: 451 IEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKA 510

Query: 423 ESVFNQMP-VKDIVSWNTMIGA 443
             +   MP   +++ W +++ A
Sbjct: 511 IELIETMPFAPNVIIWGSLMSA 532


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/739 (33%), Positives = 389/739 (52%), Gaps = 52/739 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ +  +   G   K++E+       KI  D  T+  IL+ C+ ++    G +VH + 
Sbjct: 105 SWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLA 164

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   +D V GS LV M+  C  L +  RVF ++    +  W+ ++  Y +   F E 
Sbjct: 165 IQMGFE-NDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEG 223

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS---- 214
           L LFK M  +G+     T++ V +  A                        ++G +    
Sbjct: 224 LKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDM 283

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLA 268
                R+ DA K+F+ L +    S+N +I GY       K L++F+ +   NLGF  D  
Sbjct: 284 YAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGF--DEI 341

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           ++   L+ C+     + G  +H  A+K      I   NT+LDMY KCG L  A  +FE+M
Sbjct: 342 SLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEM 401

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             R  VSW ++IA + +       + LF  M+R  +EPD +   S++ ACA    L  G 
Sbjct: 402 ERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGT 461

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
           ++H  I ++ M    +V +AL+DMY KCG + +AE +  ++  K  VSWN++I       
Sbjct: 462 EIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQK 521

Query: 443 ----ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
               A   F  ML+    PD  T A +L  CA++A +E G++IH  IL+  + +D  +A+
Sbjct: 522 QSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIAS 581

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
            +VDMY KCG +  +R +F+  P +D ++W+ MI  Y  HG G  AI  F +M+   ++P
Sbjct: 582 TLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKP 641

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           +   FISVL AC+H G VD+G  +F  M     ++P++EHY+CMVDLL R+G ++EA + 
Sbjct: 642 NHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKL 701

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           IE MP   D  IW +LL  C++   V++AEK    + +L+P ++  YVLLANVYA    W
Sbjct: 702 IESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMW 761

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
            EV K+R  +    LKK PGCSWIE++ +V+ F+ G  +HP +++I      L  EMK  
Sbjct: 762 GEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWA 821

Query: 738 GYFPKTRYALINADEMEKE 756
           GY P   + L   +EME++
Sbjct: 822 GYVPDIDFML--DEEMEEQ 838



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 183/649 (28%), Positives = 319/649 (49%), Gaps = 85/649 (13%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVID--------------------------- 130
           T+  ILQ C++LK+L  GK+VH+ +  +G V                             
Sbjct: 8   TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67

Query: 131 ---DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              D +  + L+F +   G++   + +F+ +    V  WN L+  Y   G  ++S+ +F 
Sbjct: 68  PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 188 KMQSLGIAADSYTFSCVLK---------------CLA---------VVGNS--------R 215
           +M+SL I  D  TF+ +LK               CLA         V G++        +
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           ++ DA ++F E+ +R++V W+ +I+GY+ N    +GL++FK+ML +G  V  +T  +V  
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            CA   A   G  +H  ALK+ F+ +       LDMY+KC  +  A +VF  +      S
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQS 307

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           + ++I GYAR+     A+ +F+ + R  +  D  +++  L AC+       G  +H    
Sbjct: 308 YNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAV 367

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LD 445
           +  +  ++ V+N ++DMY KCG++ +A  +F +M  +D VSWN +I A          L 
Sbjct: 368 KCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLS 427

Query: 446 LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           LFV+ML++  EPD  T   ++ ACA   AL  G EIHG I++ G+  D  V +A+VDMY 
Sbjct: 428 LFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYG 487

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG+L+ A  +   +  K  +SW  +I+G+       +A   F+ M + GI PD  ++ +
Sbjct: 488 KCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYAT 547

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           VL  C++   ++ G +    +  +  +   +   + +VD+ S+ GN+ ++    E  P  
Sbjct: 548 VLDVCANMATIELGKQIHAQI-LKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP-K 605

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFE------LEPDNTGYYVLL 667
            D   W +++C    H    L EK A ++FE      ++P++T +  +L
Sbjct: 606 RDYVTWSAMICAYAYH---GLGEK-AINLFEEMQLLNVKPNHTIFISVL 650



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 35/210 (16%)

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           +T + IL  C++L AL  G+++H  ++  G      VAN ++  Y K   +  A  +FD 
Sbjct: 7   LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66

Query: 519 IPAKDLISWTIMIAGY---GMHGFGCD----------------------------AIATF 547
           +P +D+ISW  +I GY   G  GF                               +I  F
Sbjct: 67  MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF-FNMMRYECNIEPKLEHYACMVDLLS 606
             MR   I  D  +F  +L AC  SG+ D G     + +  +   E  +   + +VD+ S
Sbjct: 127 VRMRSLKIPHDYATFAVILKAC--SGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           +   L +A+R    MP   +   W +++ G
Sbjct: 185 KCKKLDDAFRVFREMP-ERNLVCWSAVIAG 213


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/689 (35%), Positives = 371/689 (53%), Gaps = 47/689 (6%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D  T  S L+ C   K L+ GK +H  I   G    + VL   L+  + +C D      
Sbjct: 1   MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQ-SNIVLSKSLIGFYFSCHDYASAEL 59

Query: 154 VFNKIDNG-KVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSCVLKCLAVV 211
           VF   D    V +WN L+  Y+    F E+L LF ++  +  +  D YT+  VLK    +
Sbjct: 60  VFQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGL 119

Query: 212 GN---SRRVK-----------------------------DAHKLFDELSDRDVVSWNCMI 239
           G     RR+                              DA KLFDE   RDV  WN +I
Sbjct: 120 GRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVI 179

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           S Y  +G AE  L+ F +M  LGF  +  T   V+S C     L  G+ VH   ++    
Sbjct: 180 SCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRIL 239

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +    + L+DMY KCG L+ A  VFEK+  ++ ++W +MI GY+ +G     I L   M
Sbjct: 240 LDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRM 299

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
             EG +P +  +TSI++A +    L  GK +H YI  N +   +++  +L+D Y KCG +
Sbjct: 300 NDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYV 359

Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPAC 468
           + AE++F  +   ++VSWN MI           AL ++  M ++  +PD +T +  L AC
Sbjct: 360 SSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSAC 419

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           + LAAL++GRE+H  I+ H + A+  V  A++DMY KCG +  AR LF  +P +DL+SWT
Sbjct: 420 SQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWT 479

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI  YG HG   +A+  F++M++  +  D V+F++VL ACSH+GLVDEG+ +FN M  +
Sbjct: 480 SMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQ 539

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM-MPVAPDATIWGSLLCGCRIHHEVKLAE 647
            +I+P +EHY+C++DLL R G L EAY  ++       D  +  +L   C +H+   L  
Sbjct: 540 YDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGI 599

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
           ++ + + E++PD+   Y+LL+N+YA   KW+EV+K+R K+   GLKK+PGCSWIEI  ++
Sbjct: 600 QIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRI 659

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKR 736
           + F A   S+P A  +   L  L   M++
Sbjct: 660 HPFFAEDKSNPLADGVYECLNILGCHMEK 688



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 178/398 (44%), Gaps = 36/398 (9%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  + + G  E A++     ++   +    T+  ++  C  L +LE GK+VH  + 
Sbjct: 175 WNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELI 234

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           E  I++D  VL S LV M+  CG L+  + VF KI       WN ++  YS  G+ +  +
Sbjct: 235 ERRILLDAFVL-SALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCI 293

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR--------------------------- 216
            L  +M   G      T + ++   +     R                            
Sbjct: 294 ELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFY 353

Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                V  A  +F  +S  +VVSWN MISG++  G   + L ++  M       D  T  
Sbjct: 354 FKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFS 413

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           + LS C+   AL  GR +H   +             LLDMY+KCGD+D A ++F ++ +R
Sbjct: 414 STLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKR 473

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KDV 390
            +VSWTSMI  Y   G    A+RLF  M +  +  D     ++L AC+  GL++ G    
Sbjct: 474 DLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYF 533

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           ++ + + D++  +   + L+D+  + G + +A  +  +
Sbjct: 534 NEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQR 571



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 128/305 (41%), Gaps = 44/305 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +NA I  +   G+    +E+L   + E +K    T  SI+   +    L  GK +H  I
Sbjct: 275 TWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYI 334

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             + I +D  +  S + F F  CG +     +F  I   +V  WN+++  +   GN  ++
Sbjct: 335 LRNRIDVDIFIDVSLIDFYF-KCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQA 393

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRR----------------------- 216
           L+++  M+   +  D+ TFS  L     LA +   R                        
Sbjct: 394 LHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDM 453

Query: 217 ------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 V +A KLF +L  RD+VSW  MI  Y ++G A + L +F EM  L    D  T 
Sbjct: 454 YAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTF 513

Query: 271 VTVLSGCANCGA-----LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           + VLS C++ G      + F   V  + +K      I   + L+D+  + G L  A  + 
Sbjct: 514 LAVLSACSHAGLVDEGYMYFNEMVVQYDIKP----GIEHYSCLIDLLGRAGRLHEAYEIL 569

Query: 326 EKMGE 330
           ++  E
Sbjct: 570 QRSKE 574


>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 220/537 (40%), Positives = 313/537 (58%), Gaps = 42/537 (7%)

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W S +   A       AI LF  + +  + PD +  +S+L AC     L  G+ +H  ++
Sbjct: 96  WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 155

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALD 445
           +   +S+LY+ N ++ +YA CG M +A  +F +MP +D+V+WN MI          GA D
Sbjct: 156 KVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYD 215

Query: 446 LF---------------------------VAMLQNFEPDGV-----TMACILPACASLAA 473
           LF                           + +    E  GV     T+  +L ACA L A
Sbjct: 216 LFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA 275

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           L+ G  IH Y  RHG   +  ++N ++DMYVKCG L  A  +F+ +  + ++SW+ MI G
Sbjct: 276 LDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG 335

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
             MHG   +A+  F+DM Q GIEP+ V+FI +L+ACSH GL+ EG RFF  M  +  I P
Sbjct: 336 LAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIP 395

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
           ++EHY CMVDLLSR G L EA+ FI  MP+ P+  +WG+LL  CR+H  V++AE+  +H+
Sbjct: 396 QIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHL 455

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
            EL+P N GYYV+L+N+YAEA +WE+  ++R+ +  R +KK PG S I + G V+ FVAG
Sbjct: 456 LELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAG 515

Query: 714 GSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGIL 773
             SHP  ++I    + L  EM+ +GY P T   L++ +E EK   +  HSEKLA+ FG++
Sbjct: 516 EESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLM 575

Query: 774 NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           N PA   IR+ KNLR+C DCH   K +S    REIV+RD NRFH F D  CSCR +W
Sbjct: 576 NTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 181/351 (51%), Gaps = 41/351 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           DT T  S+L+ C +L  L +G+ +H ++ + G    +  L + +V ++ +CG++ E R +
Sbjct: 127 DTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFR-SNLYLQNMIVHLYASCGEMGEARLL 185

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F K+    V  WN+++ +  K G+ +                                  
Sbjct: 186 FEKMPQRDVVTWNIMIAQLIKQGDHE---------------------------------- 211

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                A+ LF  + +R+V SW  MI+GY+  G A++ + +F +M   G   +  T+V VL
Sbjct: 212 ----GAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVL 267

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           + CA+ GAL  G  +H ++ +  F + +  +NTL+DMY KCG L+ A +VFE+M ER+VV
Sbjct: 268 AACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVV 327

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH-DY 393
           SW++MI G A  G  + A+RLF  M + GIEP+      +LHAC+  GL+  G+      
Sbjct: 328 SWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASM 387

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            ++  +   +     ++D+ ++ G + +A      MP+K + V W  ++GA
Sbjct: 388 TRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGA 438



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 192/403 (47%), Gaps = 55/403 (13%)

Query: 151 GRRVFNKIDNGK--VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-C 207
            +++F  ++  K   F+WN  +   ++  +  +++ LF +++   +  D++T S VL+ C
Sbjct: 79  AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           L ++  S                         +G I +GV EK          +GF  +L
Sbjct: 139 LNLLDLS-------------------------NGRILHGVVEK----------VGFRSNL 163

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
                ++   A+CG +   R +     +    +++   N ++    K GD +GA  +F +
Sbjct: 164 YLQNMIVHLYASCGEMGEARLL----FEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSR 219

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M ER+V SWTSMIAGY + G    AI LF  M   G++ +   + ++L ACA  G L++G
Sbjct: 220 MPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLG 279

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
             +H+Y   +  + ++ +SN L+DMY KCG + +A  VF +M  + +VSW+ MIG     
Sbjct: 280 MRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMH 339

Query: 443 -----ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNV 495
                AL LF  M Q   EP+GVT   +L AC+ +  +  GR     + R +GI      
Sbjct: 340 GRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEH 399

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
              +VD+  + G+L  A      +P K + + W  ++    +H
Sbjct: 400 YGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVH 442


>gi|302780547|ref|XP_002972048.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
 gi|300160347|gb|EFJ26965.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
          Length = 606

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/570 (39%), Positives = 323/570 (56%), Gaps = 12/570 (2%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  CA   AL     +HA  L     +    +N L+  Y +CGD++ A  VF +  + +
Sbjct: 37  LLHRCAAERALPQAHQLHALMLATGALRSRYLSNKLVQAYGQCGDVESAHAVFARQPDPN 96

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           V SW  +I+   R      A+  +R M   G  PD + +++I  A A    LE+G+ +  
Sbjct: 97  VFSWMMLISACLRNARPRAALGHYRAMQLRGCHPDAHVVSAIFCAVADTANLELGRSITA 156

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
            +    M     V+N+L++MY +CG M D E  F  MP +D VSW TM+           
Sbjct: 157 PLASTAMLHDPVVANSLLNMYRRCGGMDDFERAFWAMPSRDEVSWTTMLAGRIQCGREAS 216

Query: 443 ALDLFVAMLQN-FE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
           AL+L   M Q+ F     +T A ++ AC +L+A+ +GR +H  I+  G+  D  +  A++
Sbjct: 217 ALELLRVMDQDGFRITSALTFATLVDACGNLSAIAQGRHLHDRIITSGVCIDVVLHTALL 276

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           +MY KCG +  AR LFD     + I+++ M+A Y  +G   DA+  F  M Q G +PD V
Sbjct: 277 NMYAKCGRVDEARELFDQTLEPNNITFSSMVAAYARNGHFGDALKLFWSMEQDGYKPDSV 336

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F  VLYACSH G VD+ W +F  +  +  I    EH+ C VDLL+R G L++A +F+  
Sbjct: 337 TFTHVLYACSHGGFVDQAWHYFTTLEPDRGIPLVAEHFGCAVDLLARAGWLADAEKFLNR 396

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ PD+  W SLL  CRIH  V++  + AEHVF L P   G Y LL+N+Y++A KW+  
Sbjct: 397 MPIPPDSVSWMSLLQACRIHRNVEIGARAAEHVFRLAPHRAGPYSLLSNIYSDAGKWDMA 456

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            K+++ +  RG+KK  G SWIEI GK + F+ G S HP   +I   ++R+   MK  GY 
Sbjct: 457 AKVQKLMRDRGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQICQEIQRVSKVMKEHGYV 516

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T+  L +A+E EKE  L  HSEKLA+  G++  P   TI + KN+RVC DCH  AK +
Sbjct: 517 PDTKQVLHDAEEEEKEDILYFHSEKLAIGLGLIKTPPKTTISIVKNIRVCPDCHTAAKVI 576

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK   R+IV+RD N FHH +DG CSCR +W
Sbjct: 577 SKVTERKIVIRDINLFHHMEDGNCSCRDYW 606



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 185/379 (48%), Gaps = 40/379 (10%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L  CA  ++L    ++H+++  +G  +    L +KLV  +  CGD++    VF +  + 
Sbjct: 37  LLHRCAAERALPQAHQLHALMLATG-ALRSRYLSNKLVQAYGQCGDVESAHAVFARQPDP 95

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA------------ 209
            VF W +L+    +    + +L  ++ MQ  G   D++  S +   +A            
Sbjct: 96  NVFSWMMLISACLRNARPRAALGHYRAMQLRGCHPDAHVVSAIFCAVADTANLELGRSIT 155

Query: 210 ------------VVGNS-----RR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                       VV NS     RR   + D  + F  +  RD VSW  M++G I  G   
Sbjct: 156 APLASTAMLHDPVVANSLLNMYRRCGGMDDFERAFWAMPSRDEVSWTTMLAGRIQCGREA 215

Query: 250 KGLEVFKEMLNLGFNVDLA-TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
             LE+ + M   GF +  A T  T++  C N  A+  GR +H   + +    ++  +  L
Sbjct: 216 SALELLRVMDQDGFRITSALTFATLVDACGNLSAIAQGRHLHDRIITSGVCIDVVLHTAL 275

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           L+MY+KCG +D A  +F++  E + ++++SM+A YAR G F  A++LF  M ++G +PD 
Sbjct: 276 LNMYAKCGRVDEARELFDQTLEPNNITFSSMVAAYARNGHFGDALKLFWSMEQDGYKPDS 335

Query: 369 YAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSN--ALMDMYAKCGSMADAESV 425
              T +L+AC+  G ++  +  H +   E D    L   +    +D+ A+ G +ADAE  
Sbjct: 336 VTFTHVLYACSHGGFVD--QAWHYFTTLEPDRGIPLVAEHFGCAVDLLARAGWLADAEKF 393

Query: 426 FNQMPV-KDIVSWNTMIGA 443
            N+MP+  D VSW +++ A
Sbjct: 394 LNRMPIPPDSVSWMSLLQA 412


>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 267/866 (30%), Positives = 430/866 (49%), Gaps = 137/866 (15%)

Query: 32  STLPIIVSSKSHSSCTINPISASISKTLVCKT-----------KNYNAEIGRFCEVGNLE 80
           ++LPI  +   H+S      S+  + T + K            K+Y   I   C+ G+L+
Sbjct: 2   ASLPITTTPNPHTSHFKPRKSSKFASTRLAKLQEKDENRRSLYKSYFHHISSLCKDGHLQ 61

Query: 81  KAMEVLYSSE--KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG-IVIDDGVLGSK 137
           +++ +L   E    +I  + Y  +LQ C   ++L  G+++H+ I ++G     +  + +K
Sbjct: 62  ESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETK 121

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           LV  +  C   +   R+F+++    VF W  ++    + G  +++L  F +MQ  G+  D
Sbjct: 122 LVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPD 181

Query: 198 SYTFSCVLKC---LAVVGNSRRV-----------------------------KDAHKLFD 225
           ++    VLK    L ++G  + V                             +DA K+FD
Sbjct: 182 NFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFD 241

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            + +++VV+WN MI GY+ NG+ ++ ++VF +M   G      T+ + LS  AN  AL+ 
Sbjct: 242 SMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIE 301

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+  HA A+      +    +++++ YSK G ++ A  VF +M E+ VV+W  +I+ Y +
Sbjct: 302 GKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQ 361

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
                 A+ +   M  E +  D   ++SIL A A    +++GK+ H Y    +++S + V
Sbjct: 362 HHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVV 421

Query: 406 SNA-------------------------------LMDMYAKCGSMADAESVFNQMPV--- 431
           +N+                               L+  YA+ G   +A  +F QM     
Sbjct: 422 ANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSV 481

Query: 432 -KDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVT------------------- 460
             +++SWN++I           A D+F  M    F+P+ +T                   
Sbjct: 482 PPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAIL 541

Query: 461 ----------------MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
                           +  +L AC  + +L  GR IHG+I RH       VA ++VDMY 
Sbjct: 542 FFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYA 601

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG +  A+ +F M+ +K+L  +  MI+ Y +HG   +A+A F  +++ GIEPD ++F S
Sbjct: 602 KCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTS 661

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           +L ACSH+GLV+EG   F  M  + N+ P +EHY C+V LLSR GNL EA R I  MP  
Sbjct: 662 ILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQ 721

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           PDA I GSLL  CR HHE++L E +++H+F+LEP N+G YV L+N YA A +W EV  +R
Sbjct: 722 PDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMR 781

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
           + +  RGL+KNPGCSWI+  GK+N+FVAG  SHP  ++I ++L  L  EM+  GY P   
Sbjct: 782 DLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRFMGYVPIA- 840

Query: 745 YALINADEMEKEVALCGHSEKLAMAF 770
                      E  LC  ++K    F
Sbjct: 841 ---------SNEENLCSRAQKFIHGF 857


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/669 (35%), Positives = 373/669 (55%), Gaps = 48/669 (7%)

Query: 84  EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID--DGVLGSKLVFM 141
           + L  S+     T  Y S+LQ C   KS+ + K++H+     G++       L S L   
Sbjct: 6   QALSKSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAA 65

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA-ADSYT 200
           +   G     R++F+++ N  +F WN ++  Y+ +G   ++L LF +M + G    D+YT
Sbjct: 66  YAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYT 125

Query: 201 FSCVLKC--------------------------------LAVVGNSRRVKDAHKLFDELS 228
           +  V+K                                 +A+  N   ++ A ++FD + 
Sbjct: 126 YPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMR 185

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           +R +VSWN MI+GY  NG  ++ L VF  M+  G   D AT+V+VL  C+    L  GR 
Sbjct: 186 ERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRR 245

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VHA        ++IS  N+LLDMY+KCG++D A  +F +M +R VVSWT+M+ GY   G 
Sbjct: 246 VHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGD 305

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+ L + M  E ++P+   + S+L ACA    L+ G+ +H +     ++S + V  A
Sbjct: 306 ARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETA 365

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPD 457
           L+DMYAKC ++  +  VF++   +    WN +I           A++LF  ML +  +P+
Sbjct: 366 LIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPN 425

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
             T+  +LPA A L  L++ R +HGY++R G  +   VA  ++D+Y KCG L  A ++F+
Sbjct: 426 DATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFN 485

Query: 518 MIPAKD--LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
            IP KD  +I+W+ +IAGYGMHG G  AI+ F+ M Q+G++P+E++F S+L+ACSH+GLV
Sbjct: 486 GIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLV 545

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           DEG   F  M  +  +  + +HY C++DLL R G L EAY  I  M   P+  +WG+LL 
Sbjct: 546 DEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLG 605

Query: 636 GCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
            C IH  V+L E  A+ +FELEP NTG YVLLAN+Y+   +W + + +R  ++  GL+K 
Sbjct: 606 SCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKT 665

Query: 696 PGCSWIEIK 704
           P  S IE++
Sbjct: 666 PAHSLIEVR 674


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/622 (36%), Positives = 345/622 (55%), Gaps = 12/622 (1%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  L      R VV+W  +ISG + NG     L  F +M       +  T          
Sbjct: 11  AQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTA 70

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
                 G+ +HA ALK     +     +  DMYSK G    A R+F++M  R+V  W + 
Sbjct: 71  LCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAY 130

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I+    +G    AI  F    R G EPD+    + L+ACA    L++G+ +H  +  +  
Sbjct: 131 ISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGF 190

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD-----------LFV 448
           +  + V+N ++D+Y KC  +  AE VFN M  ++ VSW TM+ A +             +
Sbjct: 191 EGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLM 250

Query: 449 AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
              +  E     ++ ++ A A ++ LE GR +H   ++  +  D  V +A+VDMY KCG 
Sbjct: 251 GRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGS 310

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           +     +F  +P ++L+SW  MI+GY   G    A+  F +M+   +  + V+ I VL A
Sbjct: 311 IEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSA 369

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CS  G V  G   F  MR    IEP  EHYAC+ D+L R G +  AY F++ MP+ P  +
Sbjct: 370 CSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTIS 429

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           +WG+LL  CR++ E +L +  A+++F+L+P ++G +VLL+N++A A +W+E   +R+++ 
Sbjct: 430 VWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMK 489

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
             G+KK  GCSW+  K KV++F A  +SH    +I+++L +LR EM+  GY P T YAL 
Sbjct: 490 DVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALY 549

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + +E EK   +  HSEK+A+AFG++ LP G  IR+TKNLR+CGDCH   KF+S    REI
Sbjct: 550 DLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISGIVGREI 609

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
           ++RD+NRFH F+D +CSCR FW
Sbjct: 610 IVRDNNRFHRFRDSQCSCRDFW 631



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 202/420 (48%), Gaps = 44/420 (10%)

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-----CLAVVG----- 212
           V  W  L+    + G F  +L  F KM+   I  + +TF C  K     CL   G     
Sbjct: 23  VVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQIHA 82

Query: 213 --------NSRRVK--------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
                   N + V               +A +LFDE+  R+V  WN  IS  + +G   K
Sbjct: 83  IALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGK 142

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            ++ F E   +G   DL T    L+ CA+   L  GR +H   +++ F  ++S  N ++D
Sbjct: 143 AIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIID 202

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           +Y KC +++ A  VF  MG R+ VSW +M+A   +    + A  +F    +EGIE   Y 
Sbjct: 203 VYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYM 262

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           ++S++ A A    LE G+ VH    +  ++  ++V +AL+DMY KCGS+ D E VF++MP
Sbjct: 263 VSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMP 322

Query: 431 VKDIVSWNTMI------GALDLFVAMLQNFEPDG----VTMACILPACASLAALERGREI 480
            +++VSWN MI      G +D+ + + +  + +     VT+ C+L AC+   A++ G EI
Sbjct: 323 ERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVANYVTLICVLSACSRGGAVKLGNEI 382

Query: 481 HGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
              +  R+ I         I DM  + G++  A      +P +  IS W  ++    ++G
Sbjct: 383 FESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYG 442



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 181/383 (47%), Gaps = 18/383 (4%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MYSK    + A  + +    R VV+WT++I+G  + G F  A+  F  M RE I+P+ + 
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
                 A     L   GK +H    +    +  +V  +  DMY+K G   +A+ +F++MP
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 431 VKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGRE 479
            +++  WN  I           A+D F+   +   EPD +T    L ACA    L+ GR+
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +HG ++R G   D +VAN I+D+Y KC  + LA  +F+ +  ++ +SW  M+A    +  
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSH-SGLVDEGWRFFNMMRYECNIEPKLEHY 598
              A   F   R+ GIE  +    SV+ A +  SGL  E  R  + +  +  +E  +   
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGL--EFGRSVHALAVKACVEGDIFVG 298

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
           + +VD+  + G++ +  +    MP   +   W +++ G     +V +A  + E   E++ 
Sbjct: 299 SALVDMYGKCGSIEDCEQVFHEMP-ERNLVSWNAMISGYAHQGDVDMAMTLFE---EMQS 354

Query: 659 DNTGYYVLLANVYAEAEKWEEVK 681
           +    YV L  V +   +   VK
Sbjct: 355 EAVANYVTLICVLSACSRGGAVK 377



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 38/281 (13%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+C+ L  CAD + L+ G+++H ++  SG   D  V  + ++ ++  C +++    V
Sbjct: 158 DLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSV-ANGIIDVYGKCKEVELAEMV 216

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV--- 211
           FN +       W  ++    +    +++  +F   +  GI    Y  S V+   A +   
Sbjct: 217 FNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGL 276

Query: 212 -----------------------------GNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                        G    ++D  ++F E+ +R++VSWN MISGY
Sbjct: 277 EFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGY 336

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
              G  +  + +F+EM +     +  T++ VLS C+  GA+  G  +   +++  +  E 
Sbjct: 337 AHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIFE-SMRDRYRIEP 394

Query: 303 SFNN--TLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMI 340
              +   + DM  + G ++ A    +KM  R  +S W +++
Sbjct: 395 GAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALL 435



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 18/257 (7%)

Query: 80  EKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
           EKA  V     K  I+   Y   S++   A +  LE G+ VH++  ++  V  D  +GS 
Sbjct: 242 EKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKA-CVEGDIFVGSA 300

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           LV M+  CG +++  +VF+++    +  WN ++  Y+  G+   ++ LF++MQS  + A+
Sbjct: 301 LVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-AN 359

Query: 198 SYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGL 252
             T  CVL   +  G    VK  +++F+ + DR  +      + C+       G+ E+  
Sbjct: 360 YVTLICVLSACSRGG---AVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAY 416

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL-DM 311
           E  ++M        ++    +L+ C   G    G+       K     + S N+ LL +M
Sbjct: 417 EFVQKM---PIRPTISVWGALLNACRVYGEPELGKIAADNLFK--LDPKDSGNHVLLSNM 471

Query: 312 YSKCGDLDGAIRVFEKM 328
           ++  G  D A  V ++M
Sbjct: 472 FAAAGRWDEATLVRKEM 488


>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 246/689 (35%), Positives = 378/689 (54%), Gaps = 49/689 (7%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +++    S+L+ C + KSL   K VH  I   G+   D VL   L+ ++  C D    R 
Sbjct: 1   MESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLR-SDVVLCKSLINVYFACKDHCSARL 59

Query: 154 VFNKID-NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI-AADSYTFSCVLK----- 206
           VF  ID    V+IWN L+  YSK   F ++L +FK++ +  I   DS+T+  V+K     
Sbjct: 60  VFENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGAL 119

Query: 207 -------------------CLAVVGNS--------RRVKDAHKLFDELSDRDVVSWNCMI 239
                              C  VV +S           +D+ ++FDE+ +RDV SWN +I
Sbjct: 120 GREFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVI 179

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           S +   G AEK LE+F  M    F  +  ++   +S C+    L  G+ +H   LK  F 
Sbjct: 180 SSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFE 239

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +   N+ L+DMY +C  L+ A  VF++M  +S+V+W SMI GY   G     + L   M
Sbjct: 240 LDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRM 299

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
           + EG  P    +TSIL AC+    L  GK VH Y+  + + + +Y++ +L+D+Y KCG +
Sbjct: 300 IIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEV 359

Query: 420 ADAESVFNQMPVKDIV-SWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPA 467
             AE+VF +   KD+V SWN MI           A+D++  M+    +PD VT   +L  
Sbjct: 360 KLAETVFLKTQ-KDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLST 418

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C+ LAALE+G++IH  I    +  D  + +A++DMY KCG +  A  +F+ IP KD++SW
Sbjct: 419 CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSW 478

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
           T+MI+ YG HG   +A+  F++M++ G++PD V+F++VL AC H+GL+DEG ++F+ MR 
Sbjct: 479 TVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRS 538

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD-ATIWGSLLCGCRIHHEVKLA 646
           +  IE  +E Y+C++D+L R G L EAY  ++  P   D A +  +L C C +H +  L 
Sbjct: 539 KYGIEASIEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLG 598

Query: 647 EKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGK 706
             +A+ + E  PD+   Y +L N+YA  E W+  K++R K+   G++K PGCSWIE+  K
Sbjct: 599 YTIAKLLVEKYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCSWIEMNEK 658

Query: 707 VNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
           V  F A   SHP A+ +   L  L   M+
Sbjct: 659 VCHFFAEDRSHPQAENVYECLALLSGHME 687



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 191/401 (47%), Gaps = 36/401 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQL--CADLKSLEDGKKVHSII 122
           ++N  I  F + G+ EKA+E+    E+S  +  +    + +  C+ L  LE GK++H   
Sbjct: 174 SWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKY 233

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +    +D+ V  S LV M+  C  L+  R VF ++    +  WN ++  Y   G+ K  
Sbjct: 234 LKKEFELDEYV-NSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSC 292

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----------SRRVKDAH---------- 221
           + L  +M   G      T + +L   +   N            R V DA           
Sbjct: 293 VELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDL 352

Query: 222 -------KLFDEL---SDRDVV-SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                  KL + +   + +DVV SWN MISGY++ G   K ++V+ +M+++G   D+ T 
Sbjct: 353 YFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTF 412

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +VLS C+   AL  G+ +H    ++    +    + LLDMYSKCG++  A R+F  + +
Sbjct: 413 TSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPK 472

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVSWT MI+ Y   G    A+  F  M + G++PD     ++L AC   GL++ G   
Sbjct: 473 KDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKY 532

Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
              ++    +++S+   + L+D+  + G + +A  +  Q P
Sbjct: 533 FSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQKP 573



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 144/304 (47%), Gaps = 28/304 (9%)

Query: 55  ISKTLVCKTK-----NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCA 107
           +++T+  KT+     ++N  I  +  VGN  KA++V     S   + D  T+ S+L  C+
Sbjct: 361 LAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCS 420

Query: 108 DLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWN 167
            L +LE GK++H  I ES +  D+ +L S L+ M+  CG++KE  R+FN I    V  W 
Sbjct: 421 QLAALEKGKQIHLSISESRLETDELLL-SALLDMYSKCGNVKEASRIFNSIPKKDVVSWT 479

Query: 168 LLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL 227
           +++  Y   G  +E+LY F +MQ  G+  D  TF   L  L+  G++  + +  K F ++
Sbjct: 480 VMISAYGSHGQPREALYHFDEMQKFGVKPDGVTF---LAVLSACGHAGLIDEGVKYFSQM 536

Query: 228 SDR-----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC-- 280
             +      +  ++C+I      G A + LE +  +       D A +++ L  CA C  
Sbjct: 537 RSKYGIEASIEQYSCLID---ILGRAGRLLEAYGILQQKPETRDNAELLSTLF-CACCLH 592

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE-----RSVVS 335
              + G  +    ++  +  + S    L ++Y+     D A RV  KM E     +   S
Sbjct: 593 RDHLLGYTIAKLLVEK-YPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCS 651

Query: 336 WTSM 339
           W  M
Sbjct: 652 WIEM 655


>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
 gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
          Length = 719

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/647 (37%), Positives = 344/647 (53%), Gaps = 57/647 (8%)

Query: 202 SCVLKCLAVVGNSRRVKDAHKL--FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
           S ++    +  +S R    H L  F+    +++ ++N +I G   N      +  F+ ML
Sbjct: 112 SSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLML 171

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
             G   D  T   VL   A   +   G A+H   L+     +     +L+DMY K   L 
Sbjct: 172 RSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLG 231

Query: 320 GAIRVFEKMGER-----SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
            A +VF++  ER     S + W  +I G  + G    A++LF+ M +             
Sbjct: 232 SAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPK------------- 278

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
                               KEN   S+L      +D +AK G M  A  +F+QMP K++
Sbjct: 279 --------------------KENVSWSTL------IDGFAKNGDMDRAMELFDQMPEKNV 312

Query: 435 VSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGY 483
           VSW TM+           AL +F  ML+    P+  T+   L ACA +  LE G  IH Y
Sbjct: 313 VSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKY 372

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
           I  +G+     +  A+VDMY KCG +  A  +F     K + +WT+MI G+ +HG    A
Sbjct: 373 IKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQA 432

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           IA F  M  AGI+PDEV F+++L AC HSG VD G  FF+ MR +  IEP ++HY  +VD
Sbjct: 433 IACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVD 492

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY 663
           +L R+G L EA RFIE MP+ PD  IWG+L C CR H + K+A+     + +LEP +TG 
Sbjct: 493 MLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGN 552

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
           Y+ L+N YA   +WE+ +++R  +  RG+ KN G S IE++G+V+ FV+G   H  +K I
Sbjct: 553 YIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAI 612

Query: 724 ESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRV 783
              L+ +     ++GY P T + L N ++ EKE  L  H EKLA+AF ++    G TIR+
Sbjct: 613 CLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRI 672

Query: 784 TKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KNL+VCGDCH + K+ SK ++REI+LRD  RFHHFKDG CSCR  W
Sbjct: 673 VKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 187/391 (47%), Gaps = 23/391 (5%)

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VFN      +F +N L+   +   +F  +++ F+ M   GI  D  T+  VLK +A + +
Sbjct: 135 VFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFS 194

Query: 214 SRRVKDAHKLF----DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
           +      H +      EL     VS   M       G A K  +   E  + G +  L  
Sbjct: 195 TELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWN 254

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           ++  + GC   G++   +AV  F  KA   KE    +TL+D ++K GD+D A+ +F++M 
Sbjct: 255 VL--IKGCCKAGSM--KKAVKLF--KAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMP 308

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           E++VVSWT+M+ G++R G  + A+ +F  M+ EG+ P+ + I S L ACA  G LE G  
Sbjct: 309 EKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLR 368

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GA 443
           +H YIK+N +  +  +  AL+DMYAKCG++  A  VF +   K I +W  MI      G 
Sbjct: 369 IHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGH 428

Query: 444 LDLFVA-----MLQNFEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVAN 497
            +  +A     M    +PD V    +L AC     ++ G      + L + I        
Sbjct: 429 SEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYT 488

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAK-DLISW 527
            IVDM  + G L  A    + +P   D + W
Sbjct: 489 LIVDMLGRSGQLKEALRFIERMPMNPDFVIW 519



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 7/165 (4%)

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
            +IH  I+ H +S+   +   ++        +  + ++F+    K+L ++  +I G   +
Sbjct: 98  HQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTN 157

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD-EGWRFFNMMRYECNIEPKLE 596
               +AI  F  M ++GI+PD +++  VL   S +GL   E     + M   C IE    
Sbjct: 158 SHFFNAIFHFRLMLRSGIKPDRLTYPFVLK--SMAGLFSTELGMAIHCMILRCGIELDSF 215

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPD----ATIWGSLLCGC 637
               +VD+  +   L  A++  +  P   D    A +W  L+ GC
Sbjct: 216 VRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGC 260


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/701 (33%), Positives = 385/701 (54%), Gaps = 84/701 (11%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL 223
           + + LL+   S   +  E+  +   +  LG  +D Y  + ++ C +V  N   + DA ++
Sbjct: 214 YTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSN---MTDACRV 270

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           F+E S  D VSWN +++GYI  G  E+   ++ +M                         
Sbjct: 271 FNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPE----------------------- 307

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
                           + I  +N+++ ++   G +  A ++F++M E+ +V+W+++IA +
Sbjct: 308 ----------------RSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACF 351

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
            +  +++ AIR F GM + G+  D     S L ACA   ++ +GK +H    +   +S +
Sbjct: 352 QQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYI 411

Query: 404 YVSNALMDMYAKCGSMA-------------------------------DAESVFNQMPVK 432
            + NAL+ MY+KCG +                                +A+++F+ MP K
Sbjct: 412 NLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEK 471

Query: 433 DIVSWNTMIGAL---DLF---VAMLQN-----FEPDGVTMACILPACASLAALERGREIH 481
           D+VSW++MI      DLF   +A+ Q      F+PD  T+  ++ ACA LAALE+G+ +H
Sbjct: 472 DVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVH 531

Query: 482 GYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC 541
            YI R+G++ +  +   ++DMY+KCG +  A  +F  +  K + +W  +I G  M+G   
Sbjct: 532 AYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVE 591

Query: 542 DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACM 601
            ++  F++M++  + P+E++F+ VL AC H GLVDEG   F  M ++  I+P ++HY CM
Sbjct: 592 SSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCM 651

Query: 602 VDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNT 661
           VDLL R G L EA   +  MP+ PD   WG+LL  C+ H + ++  +V   + EL+PD+ 
Sbjct: 652 VDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHD 711

Query: 662 GYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK 721
           G++VLL+N+YA   KW++V ++R  +++  + K PGCS IE  G ++ F+AG  +HP   
Sbjct: 712 GFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMD 771

Query: 722 KIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
            IE +L  + +++K EGY P     L++ DE EKE  L  HSEKLA+AFG++N+     I
Sbjct: 772 AIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPI 831

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
           R+ KNLR+C DCH  AK +SK   R+IV+RD +RFHHF+ G
Sbjct: 832 RIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 239/489 (48%), Gaps = 54/489 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  TY  ++Q C+  +S  + K+VH+ + + G   D  V  + L+  F  C ++ +  RV
Sbjct: 212 DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNT-LINCFSVCSNMTDACRV 270

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           FN+        WN ++  Y + GN +E+ +++ +M    I A +         + + G  
Sbjct: 271 FNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASN-------SMIVLFGMR 323

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             V +A KLFDE+ ++D+V+W+ +I+ +  N + E+ +  F  M  +G  VD    V+ L
Sbjct: 324 GLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSAL 383

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL---------------- 318
           S CAN   +  G+ +H+ +LK      I+  N L+ MYSKCGD+                
Sbjct: 384 SACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLI 443

Query: 319 ---------------DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
                          D A  +F+ M E+ VVSW+SMI+GYA+  +FD  + LF+ M   G
Sbjct: 444 SWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSG 503

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
            +PD   + S++ ACA    LE GK VH YIK N +  ++ +   L+DMY KCG +  A 
Sbjct: 504 FKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETAL 563

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLA 472
            VF  M  K I +WN +I           +LD+F  M + +  P+ +T   +L AC  + 
Sbjct: 564 EVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMG 623

Query: 473 ALERGREIHGYILRHGISADRNVAN--AIVDMYVKCGVLVLARSLFDMIP-AKDLISWTI 529
            ++ G+  H Y + H      NV +   +VD+  + G L  A  L + +P   D+ +W  
Sbjct: 624 LVDEGQH-HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGA 682

Query: 530 MIAGYGMHG 538
           ++     HG
Sbjct: 683 LLGACKKHG 691



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 34/326 (10%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T  S++  CA L +LE GK VH+ I  +G+ I+  +LG+ L+ M++ CG ++   
Sbjct: 505 KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTIN-VILGTTLIDMYMKCGCVETAL 563

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            VF  +    +  WN L+   +  G  + SL +F  M+   +  +  TF      + V+G
Sbjct: 564 EVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITF------MGVLG 617

Query: 213 NSRRV----KDAHKLFDELSDR----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
             R +    +  H  +  + D     +V  + CM+      G  ++  E+   M      
Sbjct: 618 ACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRM---PMT 674

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D+AT   +L  C   G    GR V    L         F+  L ++Y+  G  D  + +
Sbjct: 675 PDVATWGALLGACKKHGDSEMGRRV-GRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEI 733

Query: 325 FEKMGERSV--VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
              M +  V  +   SMI         +G I  F  +  +   PD+ AI  +L   A   
Sbjct: 734 RGMMTKHRVLKIPGCSMIEA-------NGVIHEF--LAGDKTHPDMDAIEDMLVEMAMKL 784

Query: 383 LLE-IGKDVHDY---IKENDMQSSLY 404
            LE    D+++    + E + +S+L+
Sbjct: 785 KLEGYTPDINEVLLDVDEEEKESTLF 810



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/342 (20%), Positives = 134/342 (39%), Gaps = 74/342 (21%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGI--VIDDGVLGSKLVFMFVTCGDLKEG 151
           +D     S L  CA+L  +  GK +HS+  + G    I+   L + L++M+  CGD+   
Sbjct: 374 VDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYIN---LQNALIYMYSKCGDIMVA 430

Query: 152 RRVF---------------------NKIDNGK----------VFIWNLLMHEYSKTGNFK 180
           R++F                     N +DN K          V  W+ ++  Y++   F 
Sbjct: 431 RKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFD 490

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------- 221
           E+L LF++MQ  G   D  T   V+   A +    + K  H                   
Sbjct: 491 ETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLI 550

Query: 222 -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                        ++F  + ++ + +WN +I G   NG+ E  L++F  M       +  
Sbjct: 551 DMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEI 610

Query: 269 TMVTVLSGCANCGALMFGRAVHAFAL--KACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
           T + VL  C + G +  G+  H +++         +     ++D+  + G L  A  +  
Sbjct: 611 TFMGVLGACRHMGLVDEGQH-HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLN 669

Query: 327 KMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           +M     V +W +++    + G  +   R+ R ++   ++PD
Sbjct: 670 RMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPD 709


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/620 (37%), Positives = 341/620 (55%), Gaps = 47/620 (7%)

Query: 225 DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGA 282
           D  S    V +N +I    A+ +    L +F  M   G     D  T    L  C+    
Sbjct: 79  DGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKD 138

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L+ G  +H+   K    + +   ++ + MYS+CG  + A RVF+ M  R VVSW +MIAG
Sbjct: 139 LLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAG 198

Query: 343 YAREGVFDGAIRLFRG-MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           +AR G+FD AI +F+  +V +G  PD   +  IL A        +G              
Sbjct: 199 FARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPA--------MGN------------- 237

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
                       AK   +     VF+ M  K+++SWN M+           A++LF+ M 
Sbjct: 238 ------------AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLME 285

Query: 452 QN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
           ++  EPD +T+A +LP C  L+A   G+ IH  I R  +  +  + NA++DMY  CG L 
Sbjct: 286 KDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLK 345

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            AR +FD++ A+D+ISWT +I+ YG HG G +A+  F  M   G+EPD ++F++VL ACS
Sbjct: 346 DAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACS 405

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
           H+GL+ +G  +F+ M    +I PK EHY CMVDLL R G ++EAY FI  M + P+  +W
Sbjct: 406 HAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVW 465

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
           G+LL  CRIH  + +    A+++F L P+ TGYYVLL+N+YA A +W +V  +R  +  +
Sbjct: 466 GALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNK 525

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           G+KK PG S +E+  +V+ F  G   HP ++ I   L  L  +++  GY P+    L + 
Sbjct: 526 GIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHDV 585

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           +E +KE  L  HSEKLA+AF +LN   G  IRVT NLR C DCH  AK +S    REIVL
Sbjct: 586 EEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIVL 645

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           +D+NR HH   G CSC  +W
Sbjct: 646 KDTNRIHHIVQGVCSCGDYW 665



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 173/394 (43%), Gaps = 84/394 (21%)

Query: 137 KLVFMFVTCGDLKEGRRVF-NKIDNGK----VFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
           KL+  +  C  L     V  +   +G+       +N+L+   + +   +++L LF  M+ 
Sbjct: 55  KLIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRP 114

Query: 192 LGIA--ADSYTFSCVLK--------------------------------CLAVVGNSRRV 217
            G A   D YT+   LK                                 +++     R 
Sbjct: 115 RGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRP 174

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSG 276
           +DA+++FD +  RDVVSWN MI+G+   G+ ++ +EVFK+ + L G   D  TM  +L  
Sbjct: 175 EDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPA 234

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
             N                                 +K  D+    RVF+ M  + ++SW
Sbjct: 235 MGN---------------------------------AKPDDIRFVRRVFDNMQFKELISW 261

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            +M+A YA       A+ LF  M ++ +EPD   + ++L  C       +GK +H+ IK 
Sbjct: 262 NAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKR 321

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
            +M  +L + NALMDMYA CG + DA  +F+ M  +D++SW ++I           A+DL
Sbjct: 322 KNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDL 381

Query: 447 FVAML-QNFEPDGVTMACILPACASLAALERGRE 479
           F  ML Q  EPD +    +L AC+    L  G+ 
Sbjct: 382 FEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKH 415



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 184/371 (49%), Gaps = 29/371 (7%)

Query: 41  KSHSSCTINPISASI----------SKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSE 90
           +++++C+  P++ ++            T VC    +N  I R     +L +   VL++S 
Sbjct: 58  QAYAACSALPLAHTVLESSSPDGRSRTTTVC----FNVLI-RALTASSLHRDALVLFASM 112

Query: 91  KSK-----IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVT 144
           + +      D  TY   L+ C+  K L  G ++HS + +  + +D  V +    + M+  
Sbjct: 113 RPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAK--LRLDRNVYVAHSAISMYSR 170

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL-GIAADSYTFSC 203
           CG  ++  RVF+ + +  V  WN ++  +++ G F  ++ +FK+   L G   D+ T + 
Sbjct: 171 CGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAG 230

Query: 204 VLKCLAVVGNSRR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
           +L  +   GN++   ++   ++FD +  ++++SWN M++ Y  N    K +E+F  M   
Sbjct: 231 ILPAM---GNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKD 287

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
               D  T+ TVL  C    A   G+ +H    +      +   N L+DMY+ CG L  A
Sbjct: 288 EVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDA 347

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             +F+ M  R V+SWTS+I+ Y + G    A+ LF  M+ +G+EPD  A  ++L AC+  
Sbjct: 348 REIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHA 407

Query: 382 GLLEIGKDVHD 392
           GLL  GK   D
Sbjct: 408 GLLADGKHYFD 418



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 118/280 (42%), Gaps = 43/280 (15%)

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPV-----KDIVSWNTMIGALD---------- 445
           S+ + +  L+  YA C ++  A +V              V +N +I AL           
Sbjct: 48  SAAHANVKLIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALV 107

Query: 446 LFVAMLQNFE---PDGVTMACILPACASLAALERGREIHGYILRHGISADRNV--ANAIV 500
           LF +M        PD  T    L +C++   L  G +IH  + +  +  DRNV  A++ +
Sbjct: 108 LFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAK--LRLDRNVYVAHSAI 165

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND-MRQAGIEPDE 559
            MY +CG    A  +FD +P +D++SW  MIAG+   G    AI  F   +   G  PD 
Sbjct: 166 SMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDA 225

Query: 560 VSFISVLYACSHSGLVDEGW--RFFNMMRYECNIEPKLEHYACMVDLLSRTG---NLSEA 614
            +   +L A  ++   D  +  R F+ M+++     +L  +  M+ + +         E 
Sbjct: 226 GTMAGILPAMGNAKPDDIRFVRRVFDNMQFK-----ELISWNAMLAVYANNEFHVKAVEL 280

Query: 615 YRFIEMMPVAPDATIWGSLLCGC----------RIHHEVK 644
           +  +E   V PD+    ++L  C          RIH  +K
Sbjct: 281 FMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIK 320


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/558 (37%), Positives = 334/558 (59%), Gaps = 14/558 (2%)

Query: 287 RAVHAFALK-ACFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           + +HAF+++     +   FN  L+  + S    +  A ++F ++   ++ +W +MI G+A
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111

Query: 345 REGVFDGAIRLFRGM-VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
                  A+ LF  M     I PD +    +  A A    + +G+ +H  +  N   S  
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLR 171

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQ 452
           +V N+L+ MY+  GS+  A  VF  M  +D V+WN++I           AL L+  M  +
Sbjct: 172 FVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSE 231

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
             EPDG TM  +L AC  L AL  G  +H Y+++ G+  +++ +NA++D+Y KCG    A
Sbjct: 232 GVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDA 291

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           + +FD +  + ++SWT +I G  ++G G +A+  F ++ + G++P E++F+ VLYACSH 
Sbjct: 292 QKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHC 351

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           G++DEG+ +F  M+ E  I P++EH+ CMVDLL R G + +AY +I  MPV P+A IW +
Sbjct: 352 GMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRT 411

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           LL  C IH  ++L E     +  LE  ++G +VLL+N+YA   +W +V+ +R+ +  +G+
Sbjct: 412 LLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGV 471

Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 752
           KK PG S +E+K +V  F+ G  SHP +++  ++L ++   +K EGY P+T   L + +E
Sbjct: 472 KKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEE 531

Query: 753 MEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRD 812
            EKE AL  H+EK+A+AF ++N P G  IR+ KNLRVC DCH   K +SK   REI++RD
Sbjct: 532 EEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRD 591

Query: 813 SNRFHHFKDGRCSCRGFW 830
            +RFHHFKDG CSC+ +W
Sbjct: 592 RSRFHHFKDGSCSCKDYW 609



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 197/379 (51%), Gaps = 38/379 (10%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT-CGDLKEGRRVFNKID 159
           S++QLC   +S    K++H+     G+   +      L+F  V+    +    ++FN+I 
Sbjct: 39  SLVQLCGSSQS--KLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQ 96

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLA--------- 209
              +F WN ++  ++++ N   ++ LF +M +   I  D++TF  + K +A         
Sbjct: 97  APNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGE 156

Query: 210 -----VVGNS----RRVKD--------------AHKLFDELSDRDVVSWNCMISGYIANG 246
                VV N     R V++              A+++F+ +S RD V+WN +I+G+  NG
Sbjct: 157 GIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNG 216

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           +  + L +++EM + G   D  TMV++LS C   GAL  G  VH + +K    +    +N
Sbjct: 217 MPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASN 276

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            LLD+YSKCG+   A +VF++M ERSVVSWTS+I G A  G+ + A++LF  + R+G++P
Sbjct: 277 ALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKP 336

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESV 425
                  +L+AC+  G+L+ G +    +KE   +   +     ++D+  + G + DA   
Sbjct: 337 SEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDY 396

Query: 426 FNQMPV-KDIVSWNTMIGA 443
              MPV  + V W T++GA
Sbjct: 397 IRNMPVPPNAVIWRTLLGA 415



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 171/348 (49%), Gaps = 20/348 (5%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-D 266
            A+V  S  +  A ++F+++   ++ +WN MI G+  +      +E+F +M      + D
Sbjct: 76  FALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPD 135

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             T   +    A    +  G  +H+  ++  F       N+L+ MYS  G L  A +VFE
Sbjct: 136 THTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFE 195

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
            M  R  V+W S+I G+A  G+ + A+ L+R M  EG+EPD + + S+L AC   G L +
Sbjct: 196 IMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALAL 255

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----- 441
           G+ VH Y+ +  +  + + SNAL+D+Y+KCG+  DA+ VF++M  + +VSW ++I     
Sbjct: 256 GERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAV 315

Query: 442 -----GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR----HGISA 491
                 AL LF  +  Q  +P  +T   +L AC+    L+ G     Y  R    +GI  
Sbjct: 316 NGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEG---FNYFRRMKEEYGILP 372

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
                  +VD+  + G +  A      +P   + + W  ++    +HG
Sbjct: 373 RIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHG 420



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 161/408 (39%), Gaps = 76/408 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            +N  I  F E  N   A+E+   ++++     DT T+  + +  A L  +  G+ +HS+
Sbjct: 102 TWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSV 161

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +  +G      V  S LV M+   G L    +VF  +       WN +++ ++  G   E
Sbjct: 162 VVRNGFDSLRFVQNS-LVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNE 220

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRRV--------------------- 217
           +L L+++M S G+  D +T   +L     L  +    RV                     
Sbjct: 221 ALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLD 280

Query: 218 --------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                   +DA K+FDE+ +R VVSW  +I G   NG+  + L++F E+   G      T
Sbjct: 281 LYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEIT 340

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V VL  C++CG L  G                       + + +  +  G +   E  G
Sbjct: 341 FVGVLYACSHCGMLDEG----------------------FNYFRRMKEEYGILPRIEHHG 378

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
                    M+    R G    A    R M    + P+     ++L AC   G LE+G+ 
Sbjct: 379 --------CMVDLLCRAGKVGDAYDYIRNM---PVPPNAVIWRTLLGACTIHGHLELGEV 427

Query: 390 VHDYIKENDMQSS---LYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
               I+  + + S   + +SN    +YA      D ++V   M +K +
Sbjct: 428 ARAEIQRLEQRHSGDFVLLSN----LYASERRWLDVQNVRKIMLMKGV 471


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/655 (35%), Positives = 368/655 (56%), Gaps = 44/655 (6%)

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
           +M   G+   +Y  S +++   +  +   +  A  +F+ + + +++ WN M  G+  +  
Sbjct: 12  QMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSD 71

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
               L+++  M++LG   +  T   +L  CA   A   G+ +H   LK     ++  + +
Sbjct: 72  PVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 131

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTS----------------------------- 338
           L+ MY + G L+ A +VF++   R VVS+T+                             
Sbjct: 132 LISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSW 191

Query: 339 --MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
             MI+GYA  G +  A+ LF+ M++  + PD   + +++ ACA  G +E+G+ VH +I +
Sbjct: 192 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDD 251

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           +   S+L + NAL+D+Y+KCG +  A  +F  +P KD++SWNT+IG          AL L
Sbjct: 252 HGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLL 311

Query: 447 FVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRH--GISADRNVANAIVDMY 503
           F  ML++ E P+ VTM  ILPACA L A++ GR IH YI +   G++   ++  +++DMY
Sbjct: 312 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMY 371

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG +  A  +F+ I  K L SW  MI G+ MHG    +   F+ MR+ GIEPD+++F+
Sbjct: 372 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFV 431

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L ACSHSG++D G   F  M  +  + PKLEHY CM+DLL  +G   EA   I  M +
Sbjct: 432 GLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM 491

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            PD  IW SLL  C++H  V+L E  A+++ ++EP+N G YVLL+N+YA A +W EV   
Sbjct: 492 EPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANT 551

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R  ++ +G+KK PGCS IEI   V+ F+ G   HP  ++I  +L+ + + ++  G+ P T
Sbjct: 552 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDT 611

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
              L   +E  KE AL  HSEKLA+AFG+++   G  + + KNLRVC +CHE  K
Sbjct: 612 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAYK 666



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 159/533 (29%), Positives = 257/533 (48%), Gaps = 89/533 (16%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T+  +L+ CA  K+ ++G+++H  + + G  +D  V  S L+ M+V  G L++  +V
Sbjct: 90  NSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS-LISMYVQNGRLEDAHKV 148

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F++  +  V  +  L+  Y+  G                                     
Sbjct: 149 FDESPHRDVVSYTALIKGYASRG------------------------------------- 171

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             +++A K+FDE+  +DVVSWN MISGY   G  ++ LE+FK+M+      D +TMVTV+
Sbjct: 172 -YIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 230

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S CA  G++  GR VH++     F   +   N L+D+YSKCG+L+ A  +FE +  + V+
Sbjct: 231 SACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVI 290

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW ++I GY    ++  A+ LF+ M+R G  P+   + SIL ACA  G ++IG+ +H YI
Sbjct: 291 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 350

Query: 395 KE--NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------G 442
            +    + ++  +  +L+DMYAKCG +  A  VFN +  K + SWN MI           
Sbjct: 351 DKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 410

Query: 443 ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           + D+F  M +N  EPD +T   +L AC+    L+ GR    +I R  ++ D         
Sbjct: 411 SFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR----HIFR-SMTQD--------- 456

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
                         + M P   L  +  MI   G  G   +A    N M    +EPD V 
Sbjct: 457 --------------YKMTP--KLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVI 497

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE-HYACMVDLLSRTGNLSE 613
           + S+L AC   G V+ G  F   +     IEP+    Y  + ++ +  G  +E
Sbjct: 498 WCSLLKACKMHGNVELGESFAQNL---IKIEPENPGSYVLLSNIYATAGRWNE 547



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 171/410 (41%), Gaps = 76/410 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + E GN ++A+E+     K+ +  D  T  +++  CA   S+E G++VHS I
Sbjct: 190 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWI 249

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   +  ++ + L+ ++  CG+L+    +F  +    V  WN L+  Y+    +KE+
Sbjct: 250 DDHGFGSNLKIVNA-LIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEA 308

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----------SRRVKD------------ 219
           L LF++M   G   +  T   +L   A +G             +R+K             
Sbjct: 309 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLI 368

Query: 220 -----------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                      AH++F+ +  + + SWN MI G+  +G A+   ++F  M   G   D  
Sbjct: 369 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDI 428

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T V +LS C++ G L  GR  H F              ++   Y     L+         
Sbjct: 429 TFVGLLSACSHSGMLDLGR--HIF-------------RSMTQDYKMTPKLE--------- 464

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                  +  MI      G+F  A  +   M    +EPD     S+L AC   G +E+G+
Sbjct: 465 ------HYGCMIDLLGHSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELGE 515

Query: 389 D-VHDYIKENDMQSSLYVSNALMDMYAKCG---SMADAESVFNQMPVKDI 434
               + IK        YV   L ++YA  G    +A+  ++ N   +K +
Sbjct: 516 SFAQNLIKIEPENPGSYV--LLSNIYATAGRWNEVANTRALLNDKGMKKV 563


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/744 (32%), Positives = 393/744 (52%), Gaps = 55/744 (7%)

Query: 55  ISKTLVCKTKNY------NAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQL 105
           I    VC  K +      N+ I   C+  +  +A++      K+   ++++ TY +++  
Sbjct: 107 IPCQFVCLIKQHSRELSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILA 166

Query: 106 CADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI 165
           C  ++SL+ GKK+H  I +S     D VL + ++ M+  CG LK+ R+ F+ +    V  
Sbjct: 167 CTSIRSLKYGKKIHDHILKSNCQ-PDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVS 225

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN------------ 213
           W +++  YS+ G   +++ ++ +M   G   D  TF  ++K   + G+            
Sbjct: 226 WTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVI 285

Query: 214 ------------------SR--RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
                             +R  ++  A  +F  +S +D++SW  MI+G+   G   + L 
Sbjct: 286 KSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALY 345

Query: 254 VFKEMLNLGF-NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           +F++M   GF   +     +V S C +     FGR +H    K    + +    +L DMY
Sbjct: 346 LFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMY 405

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           +K G L  AIR F ++    +VSW ++IA ++  G  + AI  F  M+  G+ PD     
Sbjct: 406 AKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFL 465

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           S+L AC     +  G  +H YI +  +     V N+L+ MY KC ++ DA +VF  +   
Sbjct: 466 SLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSEN 525

Query: 433 -DIVSWNTMIGA----------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREI 480
            ++VSWN ++ A            LF  ML    +PD +T+  IL  CA LA+LE G ++
Sbjct: 526 ANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQV 585

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           H + ++ G+  D +V+N ++DMY KCG L  AR +F      D++SW+ +I GY   G G
Sbjct: 586 HCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLG 645

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
            +A+  F  M+  G++P+EV+++ VL ACSH GLV+EGW F+N M  E  I P  EH +C
Sbjct: 646 HEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSC 705

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           MVDLL+R G L EA  FI+ M   PD T+W +LL  C+ H  V +AE+ AE++ +L+P N
Sbjct: 706 MVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSN 765

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
           +   VLL+N++A    W+EV +LR  + + G++K PG SWI +K ++++F +  +SH   
Sbjct: 766 SAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQR 825

Query: 721 KKIESLLKRLRLEMKREGYFPKTR 744
             I ++L+ L L+M  +GY P  R
Sbjct: 826 GDIYTMLEDLWLQMLDDGYDPCQR 849


>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g11460
 gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
 gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/610 (36%), Positives = 339/610 (55%), Gaps = 21/610 (3%)

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           WN  +       +  + + +++ ML  G + D  +   +L  CA+    + G+ +H    
Sbjct: 21  WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS--WTSMIAGYAREGVFDGA 352
           K     E      L+ MY KCG +  A +VFE+  + S +S  + ++I+GY        A
Sbjct: 81  KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
             +FR M   G+  D   +  ++  C     L +G+ +H    +  + S + V N+ + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIGALD---LFVAMLQNFE--------PDGVTM 461
           Y KCGS+     +F++MPVK +++WN +I       L   +L+ +E        PD  T+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
             +L +CA L A + G E+   +  +G   +  V+NA + MY +CG L  AR++FD++P 
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           K L+SWT MI  YGMHG G   +  F+DM + GI PD   F+ VL ACSHSGL D+G   
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           F  M+ E  +EP  EHY+C+VDLL R G L EA  FIE MPV PD  +WG+LL  C+IH 
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
            V +AE     V E EP+N GYYVL++N+Y++++  E + ++R  +  R  +K PG S++
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE-MKREGYFPKTRYALINADEMEKEVALC 760
           E KG+V++F+AG  SH   +++  +L  L    M+  G     R   +++   E      
Sbjct: 501 EHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEEVSSTTRE------ 554

Query: 761 GHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFK 820
            HSE+LA+AFGILN   G  I V KNLRVC DCH   K +SK   R+ V+RD++RFH+FK
Sbjct: 555 -HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFK 613

Query: 821 DGRCSCRGFW 830
           DG CSC+ +W
Sbjct: 614 DGVCSCKDYW 623



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 221/469 (47%), Gaps = 50/469 (10%)

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-----LAVVGNSRR---- 216
           WN+ + E +    F ES+ L++ M   G + D+++F  +LK      L V G        
Sbjct: 21  WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80

Query: 217 -----------------------VKDAHKLFDE--LSDRDVVSWNCMISGYIANGVAEKG 251
                                  V DA K+F+E   S +  V +N +ISGY AN      
Sbjct: 81  KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
             +F+ M   G +VD  TM+ ++  C     L  GR++H   +K     E++  N+ + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y KCG ++   R+F++M  + +++W ++I+GY++ G+    + L+  M   G+ PD + +
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            S+L +CA  G  +IG +V   ++ N    +++VSNA + MYA+CG++A A +VF+ MPV
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           K +VSW  MIG           L LF  M++    PDG     +L AC+     ++G E+
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380

Query: 481 HGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
              + R + +       + +VD+  + G L  A    + +P + D   W  ++    +H 
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG-WRFFNMMR 586
               A   F  + +   EP+ + +  ++          EG WR   MMR
Sbjct: 441 NVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMR 487



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 197/413 (47%), Gaps = 46/413 (11%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S  D  ++  IL+ CA L     G+++H  + + G   +  VL + L+ M+  CG + + 
Sbjct: 49  SSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVL-TALISMYCKCGLVADA 107

Query: 152 RRVF--NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-------- 201
           R+VF  N   +     +N L+  Y+      ++ Y+F++M+  G++ DS T         
Sbjct: 108 RKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCT 167

Query: 202 -------------SCV---LKCLAVVGNS--------RRVKDAHKLFDELSDRDVVSWNC 237
                         CV   L     V NS          V+   +LFDE+  + +++WN 
Sbjct: 168 VPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNA 227

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +ISGY  NG+A   LE++++M + G   D  T+V+VLS CA+ GA   G  V        
Sbjct: 228 VISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNG 287

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F   +  +N  + MY++CG+L  A  VF+ M  +S+VSWT+MI  Y   G+ +  + LF 
Sbjct: 288 FVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFD 347

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKC 416
            M++ GI PD      +L AC+  GL + G ++   +K E  ++      + L+D+  + 
Sbjct: 348 DMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRA 407

Query: 417 GSMADAESVFNQMPVK-DIVSWNTMIGA---------LDLFVAMLQNFEPDGV 459
           G + +A      MPV+ D   W  ++GA          +L  A +  FEP+ +
Sbjct: 408 GRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNI 460



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 143/317 (45%), Gaps = 47/317 (14%)

Query: 49  NPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLC 106
           NP S+ +S   VC    YNA I  +     +  A  +    +++   +D+ T   ++ LC
Sbjct: 114 NPQSSQLS---VC----YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLC 166

Query: 107 ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIW 166
              + L  G+ +H    + G+  +  VL S  + M++ CG ++ GRR+F+++    +  W
Sbjct: 167 TVPEYLWLGRSLHGQCVKGGLDSEVAVLNS-FITMYMKCGSVEAGRRLFDEMPVKGLITW 225

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR----------- 215
           N ++  YS+ G   + L L+++M+S G+  D +T   VL   A +G  +           
Sbjct: 226 NAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVES 285

Query: 216 ---------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                                 +  A  +FD +  + +VSW  MI  Y  +G+ E GL +
Sbjct: 286 NGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLML 345

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF-ALKACFSKEISFNN--TLLDM 311
           F +M+  G   D A  V VLS C++ G  +  + +  F A+K  +  E    +   L+D+
Sbjct: 346 FDDMIKRGIRPDGAVFVMVLSACSHSG--LTDKGLELFRAMKREYKLEPGPEHYSCLVDL 403

Query: 312 YSKCGDLDGAIRVFEKM 328
             + G LD A+   E M
Sbjct: 404 LGRAGRLDEAMEFIESM 420


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/692 (34%), Positives = 377/692 (54%), Gaps = 31/692 (4%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL 223
           FI   L+   +K    +E   L + +   G   D    + +L+  A  G+   + DA ++
Sbjct: 31  FIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS---LDDAKRV 87

Query: 224 FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL 283
           F+ +  +D+ +W+ +I+ Y   G  E  + +++ M+  G   ++ T    L GCA+   L
Sbjct: 88  FEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGL 147

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             GRA+H   L +   ++    ++LL+MY KC ++  A +VFE M  R+V S+T+MI+ Y
Sbjct: 148 ADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAY 207

Query: 344 AREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
            + G    A+ LF  M + E IEP+ Y   +IL A    G LE G+ VH ++      ++
Sbjct: 208 VQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTN 267

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQ 452
           + V NAL+ MY KCGS  +A  VF+ M  ++++SW +MI A          L+LF  M  
Sbjct: 268 VVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM-- 325

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
           + EP GV+ +  L ACA L AL+ GREIH  ++   + A   +  +++ MY +CG L  A
Sbjct: 326 DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANL-ASPQMETSLLSMYARCGSLDDA 384

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           R +F+ +  +D  S   MIA +  HG    A+  +  M Q GI  D ++F+SVL ACSH+
Sbjct: 385 RRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHT 444

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
            LV +   F   +  +  + P +EHY CMVD+L R+G L +A   +E MP   DA  W +
Sbjct: 445 SLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMT 504

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           LL GC+ H ++   E+ A  VFEL P  T  YV L+N+YA A+++++ +++R+++  RG+
Sbjct: 505 LLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGV 564

Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHA-------KKIESLLKRLRLEMKREGYFPKTRY 745
            +    S+IEI  ++++F +GG             +++ SLL  L   MK+ GY P TR 
Sbjct: 565 TRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLVELLEPMKQAGYVPDTRE 624

Query: 746 ALIN----ADEMEKEVALCGHSEKLAMAFGIL---NLPAGQTIRVTKNLRVCGDCHEMAK 798
             +       E EK+ +LC HSE+LA+A+G++   +    + +RV  + RVC  CH   K
Sbjct: 625 VYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSGCHSAIK 684

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +S    + I +RD +RFHHF+ G CSC   W
Sbjct: 685 LLSDITEKRIFVRDGSRFHHFEKGACSCGDHW 716



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/397 (35%), Positives = 210/397 (52%), Gaps = 19/397 (4%)

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MI+  +  G   + LE++ EM   G   D   + ++++ C    AL  GR +H   +   
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F  +I     LL MY+KCG LD A RVFE M  + + +W+S+IA YAR G  + A+ L+R
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M+ EG+EP+V      L  CA    L  G+ +H  I  + +     + ++L++MY KC 
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM--LQNFEPDGVTMACIL 465
            M +A  VF  M  +++ S+  MI           AL+LF  M  ++  EP+  T A IL
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
            A   L  LE+GR++H ++   G   +  V NA+V MY KCG  V AR +FD + A+++I
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           SWT MIA Y  HG   +A+  F  M    +EP  VSF S L AC+  G +DEG R  +  
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEG-REIHHR 356

Query: 586 RYECNI-EPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
             E N+  P++E    ++ + +R G+L +A R    M
Sbjct: 357 VVEANLASPQME--TSLLSMYARCGSLDDARRVFNRM 391



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 251/510 (49%), Gaps = 53/510 (10%)

Query: 77  GNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G   +A+E+    E+  I  D     S++  C  L++LE+G+++H  +  +G   D   L
Sbjct: 9   GRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIP-L 67

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
            + L+ M+  CG L + +RVF  ++   +F W+ ++  Y++ G  + ++ L+++M + G+
Sbjct: 68  ETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGV 127

Query: 195 AADSYTFSCVL-KCLAVVG--NSRRVK-----------------------------DAHK 222
             +  TF+C L  C +V G  + R +                              +A K
Sbjct: 128 EPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARK 187

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCG 281
           +F+ +  R+V S+  MIS Y+  G   + LE+F  M  +     +  T  T+L      G
Sbjct: 188 VFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLG 247

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
            L  GR VH       F   +   N L+ MY KCG    A +VF+ M  R+V+SWTSMIA
Sbjct: 248 NLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIA 307

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
            YA+ G    A+ LF+ M    +EP   + +S L+ACA  G L+ G+++H  + E ++ +
Sbjct: 308 AYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANL-A 363

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
           S  +  +L+ MYA+CGS+ DA  VFN+M  +D  S N MI           AL ++  M 
Sbjct: 364 SPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKME 423

Query: 452 QNFEP-DGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVL 509
           Q   P DG+T   +L AC+  + +   R+ +   ++ HG+         +VD+  + G L
Sbjct: 424 QEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRL 483

Query: 510 VLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
             A  L + +P + D ++W  +++G   HG
Sbjct: 484 GDAEELVETMPYQADAVAWMTLLSGCKRHG 513



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 198/413 (47%), Gaps = 50/413 (12%)

Query: 70  IGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           I  +   G  E A+ VLY    +E  + +  T+   L  CA +  L DG+ +H  I  S 
Sbjct: 103 IAAYARAGRGEMAV-VLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASK 161

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
           +  DD VL   L+ M++ C ++ E R+VF  +    V  +  ++  Y + G   E+L LF
Sbjct: 162 VPQDD-VLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELF 220

Query: 187 KKMQSL-GIAADSYTFSCVLKCLAVVGN---SRRVK------------------------ 218
            +M  +  I  ++YTF+ +L  +  +GN    R+V                         
Sbjct: 221 SRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGK 280

Query: 219 -----DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
                +A K+FD ++ R+V+SW  MI+ Y  +G  ++ L +FK M      V  +   + 
Sbjct: 281 CGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVEPSGVSFS---SA 337

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           L+ CA  GAL  GR +H   ++A  +       +LL MY++CG LD A RVF +M  R  
Sbjct: 338 LNACALLGALDEGREIHHRVVEANLASP-QMETSLLSMYARCGSLDDARRVFNRMKTRDA 396

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
            S  +MIA + + G    A+R++R M +EGI  D     S+L AC+   L+    D  D+
Sbjct: 397 FSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLV---ADCRDF 453

Query: 394 IKENDMQSSL--YVSNAL--MDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
           ++   M   +   V + L  +D+  + G + DAE +   MP + D V+W T++
Sbjct: 454 LQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLL 506



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 19/277 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           ++ + I  + + GN ++A+  L+     +    ++ S L  CA L +L++G+++H  + E
Sbjct: 301 SWTSMIAAYAQHGNPQEALN-LFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVE 359

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
           + +      + + L+ M+  CG L + RRVFN++     F  N ++  +++ G  K++L 
Sbjct: 360 ANLASPQ--METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALR 417

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVS----WNCMI 239
           +++KM+  GI AD  TF  V   L    ++  V D       L  D  VV     + CM+
Sbjct: 418 IYRKMEQEGIPADGITFVSV---LVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMV 474

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR--AVHAFALKAC 297
                +G      E+ + M    +  D    +T+LSGC   G L  G   A   F L   
Sbjct: 475 DVLGRSGRLGDAEELVETM---PYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPA 531

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            +    F   L +MY+     D A RV ++M ER V 
Sbjct: 532 ETLPYVF---LSNMYAAAKRFDDARRVRKEMEERGVT 565


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/691 (34%), Positives = 374/691 (54%), Gaps = 57/691 (8%)

Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNL 168
           L  +  GK++H  + + G + D  V  S L+ M+  CG       +F +++      WN 
Sbjct: 52  LYDVNKGKQIHGHLLKFGFLQDIFVKNS-LLGMYWKCGAGGNAVDMFERMEERDSVSWNT 110

Query: 169 LMHEYSKTGNFKESLYLFKKMQS------------------------------------- 191
           ++  + ++G++ +SL +F++M                                       
Sbjct: 111 MISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVK 170

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANG 246
            G+ +D +  S +++     G+   +K+A  +F+ + D ++V      WN MI GY++N 
Sbjct: 171 KGVDSDEFLVSALIEMYMKCGD---IKNAENVFERIRDNELVGRNMAVWNVMILGYVSNE 227

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
                LE+F EML LG + D +T+V VL  C+    L  G+ +H   L      ++    
Sbjct: 228 CLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGT 287

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            L++MY KCGD + ++++F++    ++V W S++   A+ G  + A+  F   + +   P
Sbjct: 288 ALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFP 347

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D   + + L AC+   L   G  +H +  +    S ++V  AL+D Y KCG M  A+ VF
Sbjct: 348 DPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVF 407

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALE 475
             +  +D+VSWN +I           AL  F  M  +  +P+ VTMACIL  C  L+ + 
Sbjct: 408 YGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMI 467

Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
             +E+H Y+LRH    +  V N+++  Y KCG +  +R++F+ +P ++ ++W  ++ G+G
Sbjct: 468 LCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFG 527

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
           MHG   +  ATF  M++A I+PD  +F S+L +CSHSG VD GW++FN M  + N+EP++
Sbjct: 528 MHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRV 587

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           E Y CMVDLL R GNL++AY  I  MP +PD  IWGSLL  C+ H   KLAE VA H+FE
Sbjct: 588 EQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFE 647

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           L+  + GY VLLAN+Y ++    EV ++R  I + GLKK PGCSWIE+   ++IFVAG  
Sbjct: 648 LDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDY 707

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           SH  +  I + ++ L LEMKR GY P  + A
Sbjct: 708 SHDRSGDIYATIESLSLEMKRVGYVPHIQAA 738



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 140/529 (26%), Positives = 248/529 (46%), Gaps = 57/529 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEK---SKIDTKTYC-SILQLCADLKSLEDGKKVHS 120
           ++N  I  FC+ G+  K++ +     K        +  C + L  CA +K L  G ++H 
Sbjct: 107 SWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHG 166

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVF-----IWNLLMHEYSK 175
            + + G+  D+  L S L+ M++ CGD+K    VF +I + ++      +WN+++  Y  
Sbjct: 167 FLVKKGVDSDE-FLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVS 225

Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCV------LKCLAV------------VGNSRRV 217
                 +L LF +M  LGI+ DS T   V      L  LAV            + +  RV
Sbjct: 226 NECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRV 285

Query: 218 KDA--------------HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE-MLNLG 262
             A               ++F    + ++V W  ++     NG   + LE F E ML+ G
Sbjct: 286 GTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCG 345

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
           F  D   ++  L  C+       G A+H FA+K  F  ++     L+D Y KCGD++ A 
Sbjct: 346 FP-DPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQ 404

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
           +VF  +  R +VSW ++I+G+A+    D A++ FR M  + I+P+   +  IL  C    
Sbjct: 405 QVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLS 464

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI- 441
           ++ + K+VH Y+  +  +++  V+N+L+  YAKCG +  + +VF ++PV++ V+WN+++ 
Sbjct: 465 VMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILL 524

Query: 442 -----GALDLFVAMLQ-----NFEPDGVTMACILPACASLAALERGREIHGYILR-HGIS 490
                G  D   A  +     N +PD  T   +L +C+    ++ G +    ++  + + 
Sbjct: 525 GFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLE 584

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
                   +VD+  + G L  A  L   +P + D   W  ++A    HG
Sbjct: 585 PRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHG 633



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 208/431 (48%), Gaps = 33/431 (7%)

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD----LATMVTVLSGCANCGALMFG 286
           DV   N MI     +G  E  + V+ + +  GF V+       ++    G  +      G
Sbjct: 2   DVSKVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNK---G 58

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           + +H   LK  F ++I   N+LL MY KCG    A+ +FE+M ER  VSW +MI+G+ + 
Sbjct: 59  KQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQS 118

Query: 347 GVFDGAIRLFRGMVRE--GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
           G +  ++ +FR MV+E  G   +  A  + L +CA    L  G ++H ++ +  + S  +
Sbjct: 119 GDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEF 178

Query: 405 VSNALMDMYAKCGSMADAESVF-----NQMPVKDIVSWNTMI----------GALDLFVA 449
           + +AL++MY KCG + +AE+VF     N++  +++  WN MI           AL+LFV 
Sbjct: 179 LVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVE 238

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           ML+    PD  T+  +L  C+ L  L  G++IHG IL  G+  D  V  A+++MY KCG 
Sbjct: 239 MLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGD 298

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
              +  +F      +L+ W  ++     +G+  +A+  F++       PD V  ++ L A
Sbjct: 299 PETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRA 358

Query: 569 CSHSGLVDEGWR---FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           CS   L   G     F   M ++ ++         +VD   + G++  A +    +    
Sbjct: 359 CSFLSLKPRGMAIHGFAIKMGFDSDVFVG----GALVDFYGKCGDMEYAQQVFYGLSTR- 413

Query: 626 DATIWGSLLCG 636
           D   W +L+ G
Sbjct: 414 DLVSWNALISG 424


>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 693

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/684 (33%), Positives = 386/684 (56%), Gaps = 17/684 (2%)

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-KCLAVVGNSRRVK 218
           +G +F  NLL   Y+    F +  +   K++  G+  +    +    + + V+   + ++
Sbjct: 14  HGLIFKSNLLSSSYASQKRFSDKKFFDSKLEDGGVVVERLCRANRFGEAIDVLCGQKLLR 73

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           +A +L          ++  +I         E+G +V + +   GF   +     +L   A
Sbjct: 74  EAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYA 133

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
            CG+L+  R V          +++   N +++ Y++ G L+ A  +F++M ER   SWT+
Sbjct: 134 KCGSLVDARKV----FDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTA 189

Query: 339 MIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           M+ GY ++   + A+ L+  M R    +P+++ ++S + A A    +  GK++H +I   
Sbjct: 190 MVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRA 249

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
            + S   + ++LMDMY KCG + +A ++F+++  KD+VSW +MI              LF
Sbjct: 250 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLF 309

Query: 448 VAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             ++ + E P+  T + +L ACA L   E GR++HGY+ R G       +++++DMY KC
Sbjct: 310 SELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKC 369

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G +  AR + D  P  DL+S T +I GY  +G   +A+  F+ + ++G +PD V+F++VL
Sbjct: 370 GNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVL 429

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            AC+H+GLV++G  FF  +  + ++    +HY C+VDLL+R+G   +    +  MP+ P 
Sbjct: 430 SACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPS 489

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
             +W S+L GC  +  + LAE+ A+ +F++EP+N   YV +AN+YA A KWEE  K+R++
Sbjct: 490 KFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKR 549

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           +   G+ K PG SW EIK K ++F+A  +SHP   +I   L  LR +MK EGY P T   
Sbjct: 550 MQEIGITKKPGSSWTEIKRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLV 609

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
           L + ++ +KE  L  HSEKLA+AF IL+   G  I+V KNLR C DCH   KF+SK  +R
Sbjct: 610 LHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKR 669

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           +I +RDS RFH F++G+CSCR +W
Sbjct: 670 KITIRDSTRFHCFENGQCSCRDYW 693



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 237/493 (48%), Gaps = 55/493 (11%)

Query: 60  VCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVH 119
           +C+   +   I   C    L +A+++L  ++K      TYC+++Q+C+  ++LE+GKKVH
Sbjct: 53  LCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPP--ASTYCNLIQVCSQTRALEEGKKVH 110

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
             I  SG V    V+ ++++ M+  CG L + R+VF+++    V  WN++++ Y++ G  
Sbjct: 111 EHIRTSGFV-PGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLL 169

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMI 239
           +E+  LF                                      DE+ +RD  SW  M+
Sbjct: 170 EEARNLF--------------------------------------DEMPERDSYSWTAMV 191

Query: 240 SGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           +GY+     E+ L ++  M  +     ++ T+ + ++  A    +  G+ +H   ++A  
Sbjct: 192 TGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGL 251

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             +    ++L+DMY KCG +D A  +F+K+ ++ VVSWTSMI  Y +   +     LF  
Sbjct: 252 DSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSE 311

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           ++     P+ Y  + +L+ACA     E+G+ VH Y+         + S++L+DMY KCG+
Sbjct: 312 LIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGN 371

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPA 467
           +  A  V +  P  D+VS  ++IG          AL  F  +L++  +PD VT   +L A
Sbjct: 372 IESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSA 431

Query: 468 CASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLI 525
           C     +E+G E    I  +H ++   +    +VD+  + G     +S+   +P K    
Sbjct: 432 CTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKF 491

Query: 526 SWTIMIAGYGMHG 538
            W  ++ G   +G
Sbjct: 492 LWASVLGGCSTYG 504



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 128/306 (41%), Gaps = 36/306 (11%)

Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNL 168
           +K +  GK++H  I  +G+  D+ VL S L+ M+  CG + E R +F+KI +  V  W  
Sbjct: 233 IKCIRRGKEIHGHIVRAGLDSDE-VLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTS 291

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----------VVGNSRRV- 217
           ++  Y K+  ++E   LF ++       + YTFS VL   A          V G   RV 
Sbjct: 292 MIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVG 351

Query: 218 ---------------------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
                                + A  + D     D+VS   +I GY  NG  ++ L+ F 
Sbjct: 352 FDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFD 411

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKC 315
            +L  G   D  T V VLS C + G +  G    ++   K   +        L+D+ ++ 
Sbjct: 412 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARS 471

Query: 316 GDLDGAIRVFEKMGER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITS 373
           G  +    V  +M  + S   W S++ G +  G  D A    + + + E   P  Y   +
Sbjct: 472 GRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMA 531

Query: 374 ILHACA 379
            ++A A
Sbjct: 532 NIYAAA 537


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/722 (33%), Positives = 377/722 (52%), Gaps = 59/722 (8%)

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--------- 207
           KI + +  + NL +   SK     E+    ++M   G++  SY++ C+ +          
Sbjct: 42  KISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH 101

Query: 208 -----------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
                                  L +    R ++DA KLFDE+S+ + VS   MIS Y  
Sbjct: 102 GRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAE 161

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G+ +K + +F  ML  G     +   T+L    N  AL FGR +HA  ++A      S 
Sbjct: 162 QGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSI 221

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
              +++MY KCG L GA RVF++M  +  V+ T ++ GY + G    A++LF  +V EG+
Sbjct: 222 ETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGV 281

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           E D +  + +L ACA    L +GK +H  + +  ++S + V   L+D Y KC S   A  
Sbjct: 282 EWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACR 341

Query: 425 VFNQMPVKDIVSWNTMIGA---LDLFVAMLQNFEP---------DGVTMACILPACASLA 472
            F ++   + VSW+ +I     +  F   ++ F+          +  T   I  AC+ LA
Sbjct: 342 AFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLA 401

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
               G ++H   ++  +   +   +A++ MY KCG L  A  +F+ +   D+++WT  I+
Sbjct: 402 DCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFIS 461

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           G+  +G   +A+  F  M   G++P+ V+FI+VL ACSH+GLV++G    + M  + N+ 
Sbjct: 462 GHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVA 521

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P ++HY CM+D+ +R+G L EA +F++ MP  PDA  W   L GC  H  ++L E   E 
Sbjct: 522 PTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEE 581

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           + +L+P++T  YVL  N+Y  A KWEE  ++ + ++ R LKK   CSWI+ KGK++ F+ 
Sbjct: 582 LRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIV 641

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G   HP  ++I   LK     M+ +         +   +  E+   L  HSE+LA+AFG+
Sbjct: 642 GDKHHPQTQEIYEKLKEFDGFMEGD---------MFQCNMTERREQLLDHSERLAIAFGL 692

Query: 773 L----NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
           +    N PA   I+V KNLR C DCHE AK +S     EIV+RDS RFHHFK+G+CSC  
Sbjct: 693 ISVHGNAPA--PIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCND 750

Query: 829 FW 830
           +W
Sbjct: 751 YW 752



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 214/454 (47%), Gaps = 61/454 (13%)

Query: 70  IGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I  + E G L+KA+ +     +   K  +  Y ++L+   + ++L+ G+++H+ +  +G+
Sbjct: 156 ISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGL 215

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
             +  +  + +V M+V CG L   +RVF+++   K      LM  Y++ G  +++L LF 
Sbjct: 216 CSNTSI-ETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFV 274

Query: 188 KMQSLGIAADSYTFSCVLK----------------CLAVVGNSRRV-------------- 217
            + + G+  DS+ FS VLK                C+A +G    V              
Sbjct: 275 DLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCS 334

Query: 218 --KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVL 274
             + A + F E+ + + VSW+ +ISGY      E+ ++ FK + +   ++ +  T  ++ 
Sbjct: 335 SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIF 394

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             C+       G  VHA A+K          + L+ MYSKCG LD A  VFE M    +V
Sbjct: 395 QACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIV 454

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD-Y 393
           +WT+ I+G+A  G    A+RLF  MV  G++P+     ++L AC+  GL+E GK   D  
Sbjct: 455 AWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTM 514

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQN 453
           +++ ++  ++   + ++D+YA+ G + +A      MP                       
Sbjct: 515 LRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMP----------------------- 551

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRH 487
           FEPD ++  C L  C +   LE G EI G  LR 
Sbjct: 552 FEPDAMSWKCFLSGCWTHKNLELG-EIAGEELRQ 584



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 14/274 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           +++A I  +C++   E+A++    L S   S +++ TY SI Q C+ L     G +VH+ 
Sbjct: 353 SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD 412

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
             +  + I      S L+ M+  CG L +   VF  +DN  +  W   +  ++  GN  E
Sbjct: 413 AIKRSL-IGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASE 471

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS----WNC 237
           +L LF+KM S G+  +S TF  VL   +  G   + K  H L   L   +V      ++C
Sbjct: 472 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK--HCLDTMLRKYNVAPTIDHYDC 529

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MI  Y  +G+ ++ L+  K   N+ F  D  +    LSGC     L  G  +    L+  
Sbjct: 530 MIDIYARSGLLDEALKFMK---NMPFEPDAMSWKCFLSGCWTHKNLELGE-IAGEELRQL 585

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
             ++ +      ++Y+  G  + A  + + M ER
Sbjct: 586 DPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNER 619


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/623 (36%), Positives = 349/623 (56%), Gaps = 16/623 (2%)

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
           H+ F       V+     IS   +NG  +   E   EM  LG  +       +L+ C + 
Sbjct: 9   HRSFSSSPTNYVLQTILPISQLCSNGRLQ---EALLEMAMLGPEMGFHGYDALLNACLDK 65

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
            AL  G+ VHA  +K  +         LL  Y KC  L+ A +V ++M E++VVSWT+MI
Sbjct: 66  RALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 125

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
           + Y++ G    A+ +F  M+R   +P+ +   ++L +C     L +GK +H  I + +  
Sbjct: 126 SRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM 450
           S ++V ++L+DMYAK G + +A  +F  +P +D+VS   +I           AL++F  +
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245

Query: 451 L-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
             +   P+ VT A +L A + LA L+ G++ H ++LR  +     + N+++DMY KCG L
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR-QAGIEPDEVSFISVLYA 568
             AR LFD +P +  ISW  M+ GY  HG G + +  F  MR +  ++PD V+ ++VL  
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365

Query: 569 CSHSGLVDEGWRFFN-MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           CSH  + D G   F+ M+  E   +P  EHY C+VD+L R G + EA+ FI+ MP  P A
Sbjct: 366 CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 425

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            + GSLL  CR+H  V + E V   + E+EP+N G YV+L+N+YA A +W +V  +R  +
Sbjct: 426 GVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMM 485

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
            ++ + K PG SWI+ +  ++ F A   +HP  +++ + +K + ++MK+ GY P     L
Sbjct: 486 MQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVL 545

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
            + DE +KE  L GHSEKLA+ FG++    G  IRV KNLR+C DCH  AK  SK   RE
Sbjct: 546 YDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFERE 605

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           + LRD NRFH   DG CSC  +W
Sbjct: 606 VSLRDKNRFHQIVDGICSCGDYW 628



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 166/320 (51%), Gaps = 14/320 (4%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           ++DA K+ DE+ +++VVSW  MIS Y   G + + L VF EM+      +  T  TVL+ 
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C     L  G+ +H   +K  +   I   ++LLDMY+K G +  A  +FE + ER VVS 
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSC 222

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           T++IAGYA+ G+ + A+ +F  +  EG+ P+     S+L A +   LL+ GK  H ++  
Sbjct: 223 TAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR 282

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDL 446
            ++     + N+L+DMY+KCG+++ A  +F+ MP +  +SWN M+            L+L
Sbjct: 283 RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL 342

Query: 447 FVAML--QNFEPDGVTMACILPACASLAALERGREIHGYIL--RHGISADRNVANAIVDM 502
           F  M   +  +PD VT+  +L  C+     + G  I   ++   +G          IVDM
Sbjct: 343 FRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDM 402

Query: 503 YVKCGVLVLARSLFDMIPAK 522
             + G +  A      +P+K
Sbjct: 403 LGRAGRIDEAFEFIKRMPSK 422



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 206/429 (48%), Gaps = 42/429 (9%)

Query: 55  ISKTLVCKTKNYNAE----IGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLK 110
           I ++      NY  +    I + C  G L++A+ +  +    ++    Y ++L  C D +
Sbjct: 8   IHRSFSSSPTNYVLQTILPISQLCSNGRLQEAL-LEMAMLGPEMGFHGYDALLNACLDKR 66

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
           +L DG++VH+ + ++   +    L ++L+  +  C  L++ R+V +++    V  W  ++
Sbjct: 67  ALRDGQRVHAHMIKTR-YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 125

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-KCLAVVG----------------- 212
             YS+TG+  E+L +F +M       + +TF+ VL  C+   G                 
Sbjct: 126 SRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185

Query: 213 --------------NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
                          + ++K+A ++F+ L +RDVVS   +I+GY   G+ E+ LE+F  +
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
            + G + +  T  ++L+  +    L  G+  H   L+          N+L+DMYSKCG+L
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHA 377
             A R+F+ M ER+ +SW +M+ GY++ G+    + LFR M  E  ++PD   + ++L  
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365

Query: 378 CACDGLLEIGKDVHDYI--KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
           C+   + + G ++ D +   E   +        ++DM  + G + +A     +MP K   
Sbjct: 366 CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 425

Query: 436 S-WNTMIGA 443
               +++GA
Sbjct: 426 GVLGSLLGA 434


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/659 (36%), Positives = 364/659 (55%), Gaps = 50/659 (7%)

Query: 96  TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVF 155
           T  Y S+L+     +SL   K++H+ +  SG++  D  + S LV  +  CG +   R++F
Sbjct: 21  TTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLSID--IRSVLVATYAHCGYVHNARKLF 78

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYTFSCVLKC------- 207
           +++      ++N ++  Y   G++ E++ +F +M  S     D+YT+  V+K        
Sbjct: 79  DELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLV 138

Query: 208 -------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                    LA+  N   V++A K+FD + ++ VVSWN MI+GY
Sbjct: 139 EYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGY 198

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             NG A   L VF +M++ G  +D A++V+VL  C     L  GR VH    +    K+I
Sbjct: 199 FKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI 258

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
             +N L+DMY+KCG +D A  VF+ M ER VVSWTSMI GY   G    A+ LF+ M  E
Sbjct: 259 -VSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIE 317

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G+ P+   I  IL ACA    L+ G+ +H ++ +  + S + V  +L+DMYAKC  +  +
Sbjct: 318 GLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLS 377

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASL 471
            SVF +   K  V WN ++           A+ LF  ML +  E +  T   +LPA   L
Sbjct: 378 FSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGIL 437

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA--KDLISWTI 529
           A L+    I+ Y++R G  ++  VA +++D+Y KCG L  A  +F+ IP   +D+  W+I
Sbjct: 438 ADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSI 497

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           +IAGYGMHG G  A++ F  M Q+G++P++V+F SVL +CSH+G+VD+G   F  M  + 
Sbjct: 498 IIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDH 557

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
              P  +HY CMVDLL R G + EAY  I+ MP  P   +WG+LL  C +H  V+L E  
Sbjct: 558 QTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVA 617

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
           A  +FELEP NTG YVLLA +YA   +WE+ + +R+++   GL+K P  S IE  G VN
Sbjct: 618 ARWLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLIE-AGTVN 675



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 219/475 (46%), Gaps = 57/475 (12%)

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV- 360
           I   + L+  Y+ CG +  A ++F+++ +R  + +  MI  Y  +G +  A+++F  M+ 
Sbjct: 55  IDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLG 114

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
            +   PD Y    ++ AC+   L+E G+ +H     +   S L+V N+L+ MY  CG + 
Sbjct: 115 SKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVE 174

Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACA 469
           +A  VF+ M  K +VSWNTMI           AL +F  M+ +  E DG ++  +LPAC 
Sbjct: 175 EARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACG 234

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
            L  LE GR +HG ++   +   + V+NA+VDMY KCG +  AR +FD +  +D++SWT 
Sbjct: 235 YLKELEVGRRVHG-LVEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTS 293

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC-SHSGLVD----EGWRFFNM 584
           MI GY ++G    A++ F  M+  G+ P+ V+   +L AC S + L D     GW     
Sbjct: 294 MINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQR 353

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVK 644
           +  E  +E  L      +D+ ++   L  ++              W +LL GC +H+  K
Sbjct: 354 LYSEVAVETSL------IDMYAKCNCLGLSFSVFTRTS-RKKTVPWNALLSGC-VHN--K 403

Query: 645 LAEKV----AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN----- 695
           LA +      + + E    N      L   Y      + V  +   + R G   N     
Sbjct: 404 LATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVAT 463

Query: 696 ------PGCSWIEIKGKV--------------NIFVAGGSSHPHAKKIESLLKRL 730
                   C  +E   K+              +I +AG   H H +   SL K++
Sbjct: 464 SLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQM 518


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/708 (32%), Positives = 380/708 (53%), Gaps = 88/708 (12%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D+  +  +L  CA  +S  D  +VH+ I +S     +  + ++L+ ++  CG +   R+
Sbjct: 17  LDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFA-SETFIQNRLIDVYGKCGCVDVARK 75

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           +F+++    +F WN ++  ++K+G   +++++F+KM  +                     
Sbjct: 76  LFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQV--------------------- 114

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
                            D  SWN MISG+  +G  ++ L  F +M   GF V+  +  + 
Sbjct: 115 -----------------DQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSA 157

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           LS CA    L  G  +H+   ++ +  ++   + L+DMYSKCG ++ A  VF++M  RS 
Sbjct: 158 LSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSR 217

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH-D 392
           VSW S+I  Y + G  D A+++F  M++ G+EPD   + S++ ACA    ++ G+ +H  
Sbjct: 218 VSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHAR 277

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP---------------------- 430
            +K ++ ++ L + NAL+DMYAKC  + +A  +F+ MP                      
Sbjct: 278 VVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKV 337

Query: 431 ---------VKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACAS 470
                    VKD+++WN +I           AL LF  +  ++  P   T   +L ACA+
Sbjct: 338 ARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACAN 397

Query: 471 LAALERGREIHGYILRHGI------SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           LA L+ GR+ H ++L+HG        +D  V N+++DMY+KCG +     +F  +  KD 
Sbjct: 398 LADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDC 457

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           +SW  MI GY  +GFG  A+  F  M ++G  PD V+ I VL ACSH+GL+DEG  +F  
Sbjct: 458 VSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRS 517

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVK 644
           M  +  + P  +HY CMVDLL R G L EA   IE M + PDA +WGSLL  C++H  ++
Sbjct: 518 MTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQ 577

Query: 645 LAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIK 704
           L E V + + E++P+N+G YVLL+N+YAE   W+ V ++R+ + +RG+ K PGCSWIEI+
Sbjct: 578 LGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQ 637

Query: 705 GKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 752
           G++N+F+     H   K+I  +L+ +  +MK+ GY P       + DE
Sbjct: 638 GELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVPYVGSNEFDEDE 685


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/626 (36%), Positives = 356/626 (56%), Gaps = 14/626 (2%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           R+  A ++FD +  R+ VS N ++SGY ++G     L + +      F ++   + + ++
Sbjct: 65  RLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALLRVA---DFGLNEYVLSSAVA 121

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
             A+  +   GR  H +A+KA  ++     + +L MY +C  +D A++VF+ +   +V +
Sbjct: 122 ATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFA 181

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           + SMI G+   G  DG+  + R MVR   + D  +  ++L  CA    + +G  VH    
Sbjct: 182 FNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQAL 241

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALD 445
           +  ++ ++YV +AL+DMY KC    +A  VF  +P K+IVSW  ++           AL 
Sbjct: 242 KRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQ 301

Query: 446 LFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           LF+ M ++   P+  T A  L +CA LA L+ G  +    ++ G      V NA+++MY 
Sbjct: 302 LFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYS 361

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           K G +  AR +F  +P +D++SW  +I GY  HG   +A+  F+DM  A   P  V+FI 
Sbjct: 362 KSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIG 421

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           VL AC+  GLVDEG+ + N+M  E  ++P  EHY CMV LL R G L EA RFIE   + 
Sbjct: 422 VLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIG 481

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
            D   W SLL  C+++    L  +VAE +F+L+P + G YVLL+N+YA+A +W+ V K+R
Sbjct: 482 TDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVR 541

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
             +   G++K PG SWI++  +V++F +    HP+ ++I   L+ L  ++K  GY P   
Sbjct: 542 RLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIA 601

Query: 745 YALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTA 804
            AL + ++ +KE  L  HSEKLA+AFG++  P G+ IR+ KN+R+C DCH   K +S   
Sbjct: 602 VALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLAT 661

Query: 805 RREIVLRDSNRFHHFKDGRCSCRGFW 830
            R IV+RD+ RFH  +DG CSC  +W
Sbjct: 662 GRRIVVRDTVRFHCIEDGVCSCDDYW 687



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 218/477 (45%), Gaps = 53/477 (11%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           L  GK VH+ +  +     D V  + L+ ++V CG L   R+VF+ + +      NLLM 
Sbjct: 32  LSLGKAVHARVVRAARF--DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMS 89

Query: 172 EYSKTGNFKESLYLFKKMQ--------------------------------SLGIAADSY 199
            Y+ +G  +++L L +                                     G+A   Y
Sbjct: 90  GYASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPY 149

Query: 200 TFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
             S VL       +   + +A K+FD +S  +V ++N MI+G++  G  +    + + M+
Sbjct: 150 VCSAVLHMYCQCAH---MDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMV 206

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
                 D  + V VL  CA+   ++ G  VH  ALK      +   + L+DMY KC    
Sbjct: 207 RNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPH 266

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A RVFE + E+++VSWT+++  Y +  +F+ A++LF  M  EG+ P+ +     L++CA
Sbjct: 267 EANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCA 326

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               L+ G  +     +      L V NALM+MY+K GS+ DA  VF  MP +D+VSWN+
Sbjct: 327 GLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNS 386

Query: 440 MI----------GALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRH- 487
           +I           A++ F  ML   E P  VT   +L ACA L  ++ G      +++  
Sbjct: 387 IIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEV 446

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDM-IPAKDLISWTIMIAG---YGMHGFG 540
           G+   +     +V +  + G L  A    +      D+++W  +++    Y  +G G
Sbjct: 447 GVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLG 503



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 198/400 (49%), Gaps = 39/400 (9%)

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
           G L  G+AVHA  ++A     + +NN L+ +Y KCG L  A +VF+ M  R+ VS   ++
Sbjct: 30  GELSLGKAVHARVVRAARFDVVQYNN-LIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
           +GYA  G    A+ L R +   G+    Y ++S + A A     ++G+  H Y  +  + 
Sbjct: 89  SGYASSGRHRDALALLR-VADFGLNE--YVLSSAVAATAHVRSYDMGRQCHGYAIKAGLA 145

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM 450
              YV +A++ MY +C  M +A  VF+ +   ++ ++N+MI          G+  +  +M
Sbjct: 146 EHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSM 205

Query: 451 LQNF-EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
           ++N  + D V+   +L  CAS   +  G ++H   L+  +  +  V +A+VDMY KC   
Sbjct: 206 VRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFP 265

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             A  +F+++P K+++SWT ++  Y  +    DA+  F DM   G+ P+E ++   L +C
Sbjct: 266 HEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSC 325

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYA------CMVDLLSRTGNLSEAYRFIEMMPV 623
           +    +  G    N +   C +  K  H+        ++++ S++G++ +A R    MP 
Sbjct: 326 AGLATLKNG----NALG-ACTM--KTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMP- 377

Query: 624 APDATIWGSLLCGCRIH----------HEVKLAEKVAEHV 653
             D   W S++ G   H          H++  AE+V  +V
Sbjct: 378 CRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYV 417



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 141/313 (45%), Gaps = 39/313 (12%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ I  F + G ++ +  ++ S  ++  + D  +Y ++L  CA  K +  G +VH+   
Sbjct: 182 FNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQAL 241

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +  + ++  V GS LV M+  C    E  RVF  +    +  W  +M  Y++   F+++L
Sbjct: 242 KRRLELNVYV-GSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDAL 300

Query: 184 YLFKKMQSLGIAADSYTFSCVLKC---LAVVGN--------------------------- 213
            LF  M+  G+  + +T++  L     LA + N                           
Sbjct: 301 QLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMY 360

Query: 214 --SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
             S  V+DA ++F  +  RDVVSWN +I GY  +G A + +E F +ML         T +
Sbjct: 361 SKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFI 420

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT-LLDMYSKCGDLDGAIRVFEK--M 328
            VLS CA  G +  G       +K    K    + T ++ +  + G LD A R  E   +
Sbjct: 421 GVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCI 480

Query: 329 GERSVVSWTSMIA 341
           G   VV+W S+++
Sbjct: 481 GT-DVVAWRSLLS 492


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 246/677 (36%), Positives = 378/677 (55%), Gaps = 19/677 (2%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+    + G+ +    L  ++   G AA S   +  L  + +  +   +  A +LF  + 
Sbjct: 26  LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHL--ITMYSHCADLASALRLFAAMP 83

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            R+ VSW  ++SG   N +    L  F  M   G       + +     A  GA + G  
Sbjct: 84  RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQ 143

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H   ++  F  E+   + L DMYSKCG L  A RVF++M ++  V+WT+MI GYA+ G 
Sbjct: 144 LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 203

Query: 349 FDGAIRLFRGMVREG-IEPDVYAITSILHACAC--DGLLEIGKDVHDYIKENDMQSSLYV 405
            + A+  FR M REG +  D +   S+L A     DG L   K +H  + +   +  + V
Sbjct: 204 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLS--KSIHCCVTKAGFELEVAV 261

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIG----------ALDLFVAML-QN 453
            NAL+DMYAK   +  A  V    P   ++VS  +MI           AL ++V +  Q 
Sbjct: 262 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 321

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
            EP+  T + ++  CA  A LE+G ++H  +++  +  D  V + +VDMY KCG++ L+ 
Sbjct: 322 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 381

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
            LF+ I  +  I+W  +I  +  HG G +AI  F+ M  +GI P+ ++F+S+L ACSH+G
Sbjct: 382 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAG 441

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
           LVDEG ++F  M+    IEPK EHY+C++D   R G L EAY+FI  MP+ P+A  W SL
Sbjct: 442 LVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSL 501

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
           L  CR+    +L E  A+++ +LEP NTG +V L+ +YA   +WE+VK +R+ +    +K
Sbjct: 502 LGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIK 561

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           K PG SW++   K ++F +   SHP  K I   L+ L   +K EGY P T +   N +++
Sbjct: 562 KLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDI 621

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
            KE  L  HSE++A+AF ++++PA + I V KNLR+C DCH   KF+ K  RR+I++RD+
Sbjct: 622 AKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDN 681

Query: 814 NRFHHFKDGRCSCRGFW 830
           +RFHHF +GRCSC  +W
Sbjct: 682 SRFHHFVNGRCSCGDYW 698



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 210/485 (43%), Gaps = 47/485 (9%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S+LQ C     L  G+ +H+ +  SG       L + L+ M+  C DL    R+F  +  
Sbjct: 25  SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR 84

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV---------------L 205
                W  L+   S+     ++L  F  M+  G+A   +  S                 L
Sbjct: 85  RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQL 144

Query: 206 KCLAV-----------------VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
            C+ V                       + +A ++FD++  +D V+W  MI GY  NG  
Sbjct: 145 HCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSL 204

Query: 249 EKGLEVFKEMLNLGF-NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
           E  +  F++M   G    D     +VLS           +++H    KA F  E++  N 
Sbjct: 205 EAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNA 264

Query: 308 LLDMYSKCGDLDGAIRVFE-KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           L+DMY+K  D++ A RV +   G  +VVS TSMI GY      + A+ ++  + R+G+EP
Sbjct: 265 LIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEP 324

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           + +  +S++  CA   LLE G  +H  + + D+    +V + L+DMY KCG ++ +  +F
Sbjct: 325 NEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLF 384

Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALE 475
           N++  +  ++WN +I           A+  F  M+     P+ +    +L AC+    ++
Sbjct: 385 NEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVD 444

Query: 476 RG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
            G +  +     HGI       + I+D Y + G L  A      +P K +   W  ++  
Sbjct: 445 EGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 504

Query: 534 YGMHG 538
             M G
Sbjct: 505 CRMRG 509



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 86/410 (20%), Positives = 167/410 (40%), Gaps = 91/410 (22%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI---DTKTYCSILQLCADLKSLEDGKKVHSII 122
           + A I  + + G+LE A+      ++  +   D   +CS+L     LK     K +H  +
Sbjct: 191 WTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCV 250

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNL-----LMHEYSKTG 177
            ++G  ++  V  + L+ M+    D++   RV  KID G    WN+     ++  Y +T 
Sbjct: 251 TKAGFELEVAVRNA-LIDMYAKSMDVESASRVL-KIDPGG---WNVVSGTSMIDGYIETD 305

Query: 178 NFKESLYLFKKMQSLGIAADSYTFS-----CVLKCL--------AVVGNSRRVKDAH--- 221
             +E+L ++ +++  G+  + +TFS     C ++ L        A V  +  ++D+    
Sbjct: 306 CVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGS 365

Query: 222 ----------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                           +LF+E+  R  ++WN +I+ +  +G   + ++ F  M+  G   
Sbjct: 366 TLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRP 425

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +    V++L+ C++ G                                    +D  ++ F
Sbjct: 426 NHIAFVSLLTACSHAGL-----------------------------------VDEGLKYF 450

Query: 326 EKMGERSVVS-----WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
             M E   +      ++ +I  Y R G  D A +    M    I+P+ Y   S+L AC  
Sbjct: 451 YSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEM---PIKPNAYGWCSLLGACRM 507

Query: 381 DGLLEIGK-DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            G  E+G+    + +K     + ++VS  L  +YA  G   D ++V   M
Sbjct: 508 RGSKELGEVAAQNLMKLEPGNTGIHVS--LSGIYASLGQWEDVKAVRKLM 555


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/729 (32%), Positives = 389/729 (53%), Gaps = 58/729 (7%)

Query: 66  YNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA +  +   G  E+AM ++     E  + +++T  ++L  C     L  G+ VH    
Sbjct: 129 WNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCL 188

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
            +G+   +  + + L+  ++   D++    +F+ +    +  WN ++  Y   G++ ++L
Sbjct: 189 RNGMFDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKAL 247

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAV--------------------------------- 210
            LF +M       D   F CV   +AV                                 
Sbjct: 248 ELFVQM-----LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNA 302

Query: 211 ----VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                 N+  ++ +H+LF+ + +RD   WN MIS Y A G  E+ +++F  M + G   D
Sbjct: 303 LLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKD 362

Query: 267 LATMVTVLSGCANCGA-LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
             T+V +LS C    + L+ G+++HA  +K+    + S  N LL MY++   ++   ++F
Sbjct: 363 ERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIF 422

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++M    ++SW +MI   AR  +   A  LF  M    I+P+ Y I SIL AC     L+
Sbjct: 423 DRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLD 482

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD 445
            G+ +H Y+ ++ ++ +  +  AL DMY  CG  A A  +F   P +D++SWN       
Sbjct: 483 FGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWN------- 535

Query: 446 LFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA--DRNVANAIVDMY 503
              AM+   EP+ VT+  +L +   LA L +G+ +H Y+ R G S   D ++ANA + MY
Sbjct: 536 ---AMIXKAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMY 592

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            +CG L  A ++F  +P +++ISW  MIAGYGM+G G DA+  F+ M + G  P+ V+F+
Sbjct: 593 ARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFV 652

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           SVL ACSHSG ++ G + F+ M  + N+ P+L HY+C+VDLL+R G + EA  FI+ MP+
Sbjct: 653 SVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPI 712

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            PDA++W +LL  CR + + K A+ + E + +LEP N G YVLL+NVYA A  W EV+++
Sbjct: 713 EPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRI 772

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R  +  +GL+K PG SWI +K +V+ F AG  SHP + KI + L  L   M+  GY P  
Sbjct: 773 RTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDL 832

Query: 744 RYALINADE 752
           R+     D+
Sbjct: 833 RWVFHEEDD 841



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 178/641 (27%), Positives = 308/641 (48%), Gaps = 72/641 (11%)

Query: 44  SSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCS 101
           +S  +  ++ S +K  +   K++N+ I     + N +  +      E   +  +  T   
Sbjct: 6   ASMGLQRLTLSPTKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPL 65

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L+ CA   ++E GK +H  I +   ++DD  +G+ +V  +  CG +++ R VF+ + + 
Sbjct: 66  VLKACAAQNAVERGKSIHRSI-QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDR 124

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL---------------- 205
            V +WN +++ Y   G ++E++ L ++M    +  +S T   +L                
Sbjct: 125 DVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVH 184

Query: 206 -KCL-------------AVVGNSRR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
             CL             A++G   R  ++    LFD +  R++VSWN MISGY   G   
Sbjct: 185 GYCLRNGMFDSNPHVATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYF 244

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           K LE+F +ML      D  TM+  +  CA  G+L  G+ +H  A+K  F +++   N LL
Sbjct: 245 KALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALL 304

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           +MYS  G L+ + ++FE +  R    W SMI+ YA  G  + A+ LF  M  EG++ D  
Sbjct: 305 NMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDER 364

Query: 370 AITSILHACA--CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
            +  +L  C     GLL+ GK +H ++ ++ M+    + NAL+ MY +   +   + +F+
Sbjct: 365 TVVIMLSMCEELASGLLK-GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFD 423

Query: 428 QMPVKDIVSWNTMIGAL----------DLFVAMLQN-FEPDGVTMACILPACASLAALER 476
           +M   DI+SWNTMI AL          +LF  M ++  +P+  T+  IL AC  +  L+ 
Sbjct: 424 RMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDF 483

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           GR IHGY+++H I  ++ +  A+ DMY+ CG    AR LF+  P +DLISW  MI     
Sbjct: 484 GRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMI----- 538

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYECNIEPKL 595
                              EP+ V+ I+VL + +H   + +G      + R   ++   L
Sbjct: 539 ----------------XKAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDL 582

Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
                 + + +R G+L  A    + +P   +   W +++ G
Sbjct: 583 SLANAFITMYARCGSLQSAENIFKTLP-KRNIISWNAMIAG 622



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 239/518 (46%), Gaps = 72/518 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  + +VG+  KA+E+      ++ K D  T    +Q CA+L SL+ GK++H + 
Sbjct: 229 SWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLA 288

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +   V D  +L + L+ M+   G L+   ++F  + N    +WN ++  Y+  G  +E+
Sbjct: 289 IKFEFVEDLYILNA-LLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEA 347

Query: 183 LYLFKKMQSLGIAADSYTFSCVL-------------------------KCLAVVGNSRR- 216
           + LF +MQS G+  D  T   +L                         +  A +GN+   
Sbjct: 348 MDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLS 407

Query: 217 -------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                  V+   K+FD +   D++SWN MI     N +  +  E+F+ M       +  T
Sbjct: 408 MYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYT 467

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           ++++L+ C +   L FGR++H + +K            L DMY  CGD   A  +FE   
Sbjct: 468 IISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCP 527

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           +R ++SW +MI                        EP+   I ++L +      L  G+ 
Sbjct: 528 DRDLISWNAMIX---------------------KAEPNSVTIINVLSSFTHLATLPQGQS 566

Query: 390 VHDYIKEN--DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
           +H Y+      +   L ++NA + MYA+CGS+  AE++F  +P ++I+SWN MI      
Sbjct: 567 LHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMN 626

Query: 443 -----ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI-HGYILRHGISADRNV 495
                A+  F  ML++ F P+GVT   +L AC+    +E G ++ H  +    ++ +   
Sbjct: 627 GRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVH 686

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIA 532
            + IVD+  + G +  AR   D +P + D   W  +++
Sbjct: 687 YSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLS 724


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 256/765 (33%), Positives = 416/765 (54%), Gaps = 63/765 (8%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI---DTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           I R    G+L  A+  L    +  I   D+ T+ S+L+ C   +    GK VH+ + E  
Sbjct: 33  ILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFE 92

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN-GK--VFIWNLLMHEYSKTGNFKESL 183
           I   D VL + L+ ++   GDL + + VF  +   GK  V  W+ +M  +   G   +++
Sbjct: 93  IE-PDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAI 151

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLA---VVGNSRRV----------------------- 217
            LF +   +G+  + Y ++ V++  +    VG  R +                       
Sbjct: 152 KLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDM 211

Query: 218 --------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                   ++A+K+FD++S+ +VV+W  MI+  +  G   + +  F +M+  GF  D  T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC---GDLDGAIRVFE 326
           + +V S CA    L  GR +H++A+++  + ++    +L+DMY+KC   G +D   +VF+
Sbjct: 272 LSSVFSACAELENLSLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFD 329

Query: 327 KMGERSVVSWTSMIAGYARE-GVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLL 384
           +M + SV+SWT++I GY +   +   AI LF  M+ +G +EP+ +  +S   AC      
Sbjct: 330 RMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDP 389

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
            +GK V  +  +  + S+  VSN+++ M+ KC  M DA + F  +  K++VS+NT +   
Sbjct: 390 RVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGT 449

Query: 443 --------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
                   A +L   + +        T A +L   A++ +L +G +IH  +L+ G+S ++
Sbjct: 450 CRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQ 509

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            V NA++ MY KCG +  A  +F ++  +++ISWT MI G+  HGF    + TFN M + 
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKE 569

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G++P+EV+++++L ACSH GLV EGWR FN M  +  I+PK+EHYACMVDLL R G L++
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A+ FI  MP   D  +W + L  CR+H   +L +  A  + E +P+    Y+ L+N+YA 
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYAS 689

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
           A KWEE  ++R K+  R L K  GCSWIE+  KV+ F  G +SHP+A +I   L  L  E
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITE 749

Query: 734 MKREGYFPKTRYAL----INADEMEKEVALCGHSEKLAMAFGILN 774
           +KR GY P T   L       DE +KE+ L  HSEK+A+AFG+++
Sbjct: 750 IKRCGYVPDTDLVLHKLEEEDDEAKKEMLLYQHSEKIAVAFGLIS 794



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 137/586 (23%), Positives = 273/586 (46%), Gaps = 44/586 (7%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKV-----FIWNLLMHEYSKTGNFKESLYLFKK 188
           +  +L+   +  GDL+      + +    +       ++ L+    +  +F+    +  +
Sbjct: 28  VADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHAR 87

Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
           +    I  DS  ++ ++   +  G+  + KD  +       RDVVSW+ M++ +  NG  
Sbjct: 88  LIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGRE 147

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNT 307
              +++F E L +G   +      V+  C+N   +  GR +  F +K   F  ++    +
Sbjct: 148 FDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCS 207

Query: 308 LLDMYSKC-GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           L+DM+ K     + A +VF+KM E +VV+WT MI    + G    AIR F  MV  G E 
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC---GSMADAE 423
           D + ++S+  ACA    L +G+ +H +   + +   +  S  L+DMYAKC   GS+ D  
Sbjct: 268 DKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADDVECS--LVDMYAKCSADGSVDDCR 325

Query: 424 SVFNQMPVKDIVSWNTMIG-----------ALDLFVAMLQ--NFEPDGVTMACILPACAS 470
            VF++M    ++SW  +I            A++LF  M+   + EP+  T +    AC +
Sbjct: 326 KVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           ++    G+++ G+  + G++++ +V+N+++ M+VKC  +  AR+ F+ +  K+L+S+   
Sbjct: 386 VSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTF 445

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM---MRY 587
           + G   +     A    +++ +  +     +F S+L   ++ G + +G +  +    +  
Sbjct: 446 LDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGL 505

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
            CN +P       ++ + S+ G++  A R   +M    +   W S++ G   H     AE
Sbjct: 506 SCN-QPVCN---ALISMYSKCGSIDTASRVFSLMD-NRNVISWTSMITGFAKH---GFAE 557

Query: 648 KVAEHVFEL-----EPDNTGYYVLL---ANVYAEAEKWEEVKKLRE 685
           +V E   ++     +P+   Y  +L   ++V   +E W     + E
Sbjct: 558 RVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603


>gi|302781642|ref|XP_002972595.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
 gi|300160062|gb|EFJ26681.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
          Length = 606

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/570 (38%), Positives = 323/570 (56%), Gaps = 12/570 (2%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  CA   AL     +HA  L     +    +N L+  Y +CGD++ A  VF    + +
Sbjct: 37  LLHRCAAERALPQAHQLHALMLATGALRSRYLSNKLVQAYGQCGDVESAHAVFACQPDPN 96

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           V SW  +I+   R  +   A+  +R M   G  PD + +++I  A A    LE+G+ +  
Sbjct: 97  VFSWMMLISACLRNALPRAALGHYRAMQLRGCHPDAHVVSAIFCAVADTANLELGRSITA 156

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
            +    M     V+N+L++MY +CG M D E  F  MP +D VSW TM+           
Sbjct: 157 PLASTAMLHDPVVANSLLNMYRRCGGMDDFERAFWAMPSRDEVSWTTMLAGRIQCGREAS 216

Query: 443 ALDLFVAMLQN-FE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
           AL+L   M Q+ F     +T A ++ AC +L+A+ +GR +H  I+  G+  D  +  A++
Sbjct: 217 ALELLRVMDQDGFRITSALTFATLVDACGNLSAIAQGRHLHDRIITSGVCIDVVLHTALL 276

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           +MY KCG +  AR LFD     + I+++ M+  Y  +G   DA+  F  M Q G +PD V
Sbjct: 277 NMYAKCGRVDEARELFDQTLEPNNITFSSMVVAYARNGHFGDALKLFWSMEQDGYKPDSV 336

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           +F  VLYACSH G VD+ W +F  +  +  I    EH+ C VDLL+R G L++A +F+  
Sbjct: 337 TFTHVLYACSHGGFVDQAWHYFTTLEPDRGIPLVAEHFGCAVDLLARAGWLADAEKFLNR 396

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           MP+ PD+  W SLL  CRIH  V++  + AEHVF L P   G Y LL+N+Y++A KW+  
Sbjct: 397 MPIPPDSVSWMSLLQACRIHRNVEIGARAAEHVFRLAPHRAGPYSLLSNIYSDAGKWDMA 456

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
            K+++ +  RG+KK  G SWIEI GK + F+ G S HP   +I   ++R+   MK  GY 
Sbjct: 457 AKVQKLMRDRGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQICQEIQRVSKVMKEHGYV 516

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
           P T+  L +A+E EKE  L  HSEKLA+  G++  P   TI + KN+RVC DCH  AK +
Sbjct: 517 PDTKQVLHDAEEEEKEDILYFHSEKLAIGLGLIKTPPKTTISIVKNIRVCPDCHTAAKVI 576

Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           SK   R+IV+RD N FHH +DG+CSCR +W
Sbjct: 577 SKVTERKIVIRDINLFHHMEDGKCSCRDYW 606



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 183/379 (48%), Gaps = 40/379 (10%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L  CA  ++L    ++H+++  +G  +    L +KLV  +  CGD++    VF    + 
Sbjct: 37  LLHRCAAERALPQAHQLHALMLATG-ALRSRYLSNKLVQAYGQCGDVESAHAVFACQPDP 95

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA------------ 209
            VF W +L+    +    + +L  ++ MQ  G   D++  S +   +A            
Sbjct: 96  NVFSWMMLISACLRNALPRAALGHYRAMQLRGCHPDAHVVSAIFCAVADTANLELGRSIT 155

Query: 210 ------------VVGNS-----RR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                       VV NS     RR   + D  + F  +  RD VSW  M++G I  G   
Sbjct: 156 APLASTAMLHDPVVANSLLNMYRRCGGMDDFERAFWAMPSRDEVSWTTMLAGRIQCGREA 215

Query: 250 KGLEVFKEMLNLGFNVDLA-TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
             LE+ + M   GF +  A T  T++  C N  A+  GR +H   + +    ++  +  L
Sbjct: 216 SALELLRVMDQDGFRITSALTFATLVDACGNLSAIAQGRHLHDRIITSGVCIDVVLHTAL 275

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           L+MY+KCG +D A  +F++  E + ++++SM+  YAR G F  A++LF  M ++G +PD 
Sbjct: 276 LNMYAKCGRVDEARELFDQTLEPNNITFSSMVVAYARNGHFGDALKLFWSMEQDGYKPDS 335

Query: 369 YAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSN--ALMDMYAKCGSMADAESV 425
              T +L+AC+  G ++  +  H +   E D    L   +    +D+ A+ G +ADAE  
Sbjct: 336 VTFTHVLYACSHGGFVD--QAWHYFTTLEPDRGIPLVAEHFGCAVDLLARAGWLADAEKF 393

Query: 426 FNQMPV-KDIVSWNTMIGA 443
            N+MP+  D VSW +++ A
Sbjct: 394 LNRMPIPPDSVSWMSLLQA 412


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/693 (35%), Positives = 373/693 (53%), Gaps = 62/693 (8%)

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK-MQSLGIAAD 197
           V   V+    K     F+ I N  V+ WNL++  Y + GN  E +  F   M S G+  D
Sbjct: 26  VSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPD 85

Query: 198 SYTFSCVLK-CLAVV-GNS---------------------------RRVKDAHKLFDELS 228
             TF  VLK C  V+ GN                            + V +A  LFDE+ 
Sbjct: 86  YRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP 145

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            RD+ SWN MISGY  +G A++ L +   +  +    D  T+V++LS C   G    G  
Sbjct: 146 VRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVT 201

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H++++K     E+               L    +VF++M  R ++SW S+I  Y     
Sbjct: 202 IHSYSIKHGLESEL---------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 246

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSN 407
              AI LF+ M    I+PD   + S+    +  G +   + V  + +++      + + N
Sbjct: 247 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN 306

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE-- 455
           A++ MYAK G +  A +VFN +P  D++SWNT+I           A++++  M +  E  
Sbjct: 307 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 366

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
            +  T   +LPAC+   AL +G ++HG +L++G+  D  V  ++ DMY KCG L  A SL
Sbjct: 367 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL 426

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           F  IP  + + W  +IA +G HG G  A+  F +M   G++PD ++F+++L ACSHSGLV
Sbjct: 427 FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLV 486

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           DEG   F MM+ +  I P L+HY CMVD+  R G L  A +FI+ M + PDA+IWG+LL 
Sbjct: 487 DEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLS 546

Query: 636 GCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
            CR+H  V L +  +EH+FE+EP++ GY+VLL+N+YA A KWE V ++R     +GL+K 
Sbjct: 547 ACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKT 606

Query: 696 PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEK 755
           PG S +E+  KV +F  G  +HP  +++   L  L+ ++K  GY P  R+ L + ++ EK
Sbjct: 607 PGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEK 666

Query: 756 EVALCGHSEKLAMAFGILNLPAGQTIRVTKNLR 788
           E  L  HSE+LA+AF ++  PA  TIR+ KNLR
Sbjct: 667 EHILMSHSERLAIAFALIATPAKTTIRIFKNLR 699



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 232/476 (48%), Gaps = 40/476 (8%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D +T+ S+L+ C   +++ DG K+H +  + G + D  V  S L+ ++     +   R +
Sbjct: 85  DYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAAS-LIHLYSRYKAVGNARIL 140

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+++    +  WN ++  Y ++GN KE+L L   ++    A DS T   +L      G+ 
Sbjct: 141 FDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDF 196

Query: 215 RR-----------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
            R                 ++D  K+FD +  RD++SWN +I  Y  N    + + +F+E
Sbjct: 197 NRGVTIHSYSIKHGLESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 256

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL-KACFSKEISFNNTLLDMYSKCG 316
           M       D  T++++ S  +  G +   R+V  F L K  F ++I+  N ++ MY+K G
Sbjct: 257 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 316

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSIL 375
            +D A  VF  +    V+SW ++I+GYA+ G    AI ++  M  EG I  +     S+L
Sbjct: 317 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 376

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            AC+  G L  G  +H  + +N +   ++V  +L DMY KCG + DA S+F Q+P  + V
Sbjct: 377 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 436

Query: 436 SWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYI 484
            WNT+I           A+ LF  ML +  +PD +T   +L AC+    ++ G+     +
Sbjct: 437 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 496

Query: 485 -LRHGISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWTIMIAGYGMHG 538
              +GI+        +VDMY + G L  A + +  M    D   W  +++   +HG
Sbjct: 497 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 552



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 191/415 (46%), Gaps = 54/415 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
           ++NA I  +C+ GN ++A+ +  S+    +D+ T  S+L  C +      G  +HS   +
Sbjct: 151 SWNAMISGYCQSGNAKEALTL--SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 208

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
            G       L S+L         L++ ++VF+++    +  WN ++  Y        ++ 
Sbjct: 209 HG-------LESEL---------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 252

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR---------------------------- 216
           LF++M+   I  D  T   +   L+ +G+ R                             
Sbjct: 253 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 312

Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATM 270
                V  A  +F+ L + DV+SWN +ISGY  NG A + +E++  M   G    +  T 
Sbjct: 313 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 372

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           V+VL  C+  GAL  G  +H   LK     ++    +L DMY KCG L+ A+ +F ++  
Sbjct: 373 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 432

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
            + V W ++IA +   G  + A+ LF+ M+ EG++PD     ++L AC+  GL++ G+  
Sbjct: 433 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 492

Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            + ++ +  +  SL     ++DMY + G +  A      M ++ D   W  ++ A
Sbjct: 493 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 547



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/383 (21%), Positives = 156/383 (40%), Gaps = 72/383 (18%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T  S+  + + L  +   + V       G  ++D  +G+ +V M+   G +   R V
Sbjct: 265 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 324

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGN 213
           FN + N  V  WN ++  Y++ G   E++ ++  M+  G IAA+  T+  VL   +  G 
Sbjct: 325 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 384

Query: 214 SR--------------------------------RVKDAHKLFDELSDRDVVSWNCMISG 241
            R                                R++DA  LF ++   + V WN +I+ 
Sbjct: 385 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 444

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR-AVHAFALKACFSK 300
           +  +G  EK + +FKEML+ G   D  T VT+LS C++ G +  G+            + 
Sbjct: 445 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 504

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            +     ++DMY + G L+ A++  + M                                
Sbjct: 505 SLKHYGCMVDMYGRAGQLETALKFIKSM-------------------------------- 532

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG--- 417
              ++PD     ++L AC   G +++GK   +++ E + +   Y    L +MYA  G   
Sbjct: 533 --SLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY-HVLLSNMYASAGKWE 589

Query: 418 SMADAESVFNQMPVKDIVSWNTM 440
            + +  S+ +   ++    W++M
Sbjct: 590 GVDEIRSIAHGKGLRKTPGWSSM 612


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/572 (39%), Positives = 334/572 (58%), Gaps = 15/572 (2%)

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS---KCGDLDGAIRVFEKMGE 330
           LS    C +L   + + AFA+K     ++S     ++  S       +  A  +F+++ +
Sbjct: 24  LSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQ 83

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
             +V + +M  GYAR      A  LF  ++  G+ PD Y   S+L ACA    LE G+ +
Sbjct: 84  PDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQL 143

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H    +  +  ++YV   L++MY  C  M  A  VF+++    +V++N MI         
Sbjct: 144 HCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRP 203

Query: 443 --ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL LF  +  +N +P  VTM  +L +CA L AL+ G+ +H Y+ ++G +    V  A+
Sbjct: 204 NEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTAL 263

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           +DMY KCG L  A  +F+ +  +D  +W+ MI  Y +HG G  A++ F +MR+AG EPDE
Sbjct: 264 IDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDE 323

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           ++F+ +LYACSH+GLV+EG+ +F  MR +  + P ++HY CMVDLL R G L EAY FI 
Sbjct: 324 ITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIV 383

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            +P+ P   +W +LL  C  H  V+L ++V E +FEL+  + G Y++L+N+ A A +WE+
Sbjct: 384 GLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWED 443

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V  +R+ ++ RG+ K PGCS +E+   V+ F +G   H  + K+   L  L  E+K  GY
Sbjct: 444 VNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGY 503

Query: 740 FPKTRYAL-INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
            P T      + ++ EKEV L  HSEKLA+ FG+LN P G TIRV KNLRVCGDCH  AK
Sbjct: 504 VPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAK 563

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +S    R+I+LRD  RFHHFKDG+CSC  +W
Sbjct: 564 LISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 193/374 (51%), Gaps = 17/374 (4%)

Query: 182 SLYLFKKMQSLGIA----ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNC 237
           SL   K++Q+  I     +D    +  +   ++   +  ++ AH LFD++   D+V +N 
Sbjct: 32  SLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNT 91

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M  GY       +   +F ++L  G   D  T  ++L  CA+C AL  GR +H  A+K  
Sbjct: 92  MARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLG 151

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
            S+ +    TL++MY+ C ++D A RVF+K+ E  VV++ +MI GYAR    + A+ LFR
Sbjct: 152 LSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFR 211

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            +    ++P    + S+L +CA  G L++GK +H+Y+K+N     + V  AL+DMYAKCG
Sbjct: 212 ELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCG 271

Query: 418 SMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILP 466
           S+ DA  VF  M V+D  +W+ MI           A+ LF  M +   EPD +T   +L 
Sbjct: 272 SLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLY 331

Query: 467 ACASLAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL- 524
           AC+    +E G E  +G   ++G+         +VD+  + G L  A      +P +   
Sbjct: 332 ACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTP 391

Query: 525 ISWTIMIAGYGMHG 538
           I W  +++  G HG
Sbjct: 392 ILWRTLLSACGSHG 405



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 154/374 (41%), Gaps = 69/374 (18%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+ S+L+ CA  K+LE+G+++H +  + G+  ++  +   L+ M+  C ++   RRV
Sbjct: 120 DDYTFPSLLKACASCKALEEGRQLHCLAIKLGLS-ENVYVCPTLINMYTACNEMDCARRV 178

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN- 213
           F+KI    V  +N ++  Y++     E+L LF+++Q+  +     T   VL   A++G  
Sbjct: 179 FDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGAL 238

Query: 214 ---------------SRRVK----------------DAHKLFDELSDRDVVSWNCMISGY 242
                          +R VK                DA  +F+ ++ RD  +W+ MI  Y
Sbjct: 239 DLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAY 298

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             +G   K + +FKEM   G   D  T + +L  C++ G +  G                
Sbjct: 299 AIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGF--------------- 343

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
                   M  K G + G            +  +  M+    R G  + A     G+   
Sbjct: 344 ---EYFYGMRDKYGVIPG------------IKHYGCMVDLLGRAGRLEEAYEFIVGL--- 385

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCGSMAD 421
            I P      ++L AC   G +E+GK V + I E +D     Y+   L ++ A+ G   D
Sbjct: 386 PIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYI--ILSNLCARAGRWED 443

Query: 422 AESVFNQMPVKDIV 435
              V   M  + +V
Sbjct: 444 VNYVRKLMNERGVV 457


>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Brachypodium distachyon]
          Length = 654

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/552 (40%), Positives = 326/552 (59%), Gaps = 20/552 (3%)

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F  +   +  L++ Y+  G L  A +VF++   +++  W +++   A     D A+    
Sbjct: 104 FRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLA 163

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIG-----KDVHDYIKENDMQSSLYVSNALMDM 412
            M R G+  D Y+ T  L AC              ++VH +          +V+  L+D 
Sbjct: 164 DMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDC 223

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ---NFEPDGV 459
           YAK G +  AESVF  MP +++VSW+ MIG          A++LF  M+    +  P+ +
Sbjct: 224 YAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSI 283

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           T+  +L ACA + AL  G+ +H YILR G  +  +V NA++ MY++CG L + R +F  I
Sbjct: 284 TIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWI 343

Query: 520 -PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
              +D++SW  +I+GYGMHGFG +A+  F +M   G  P  ++FISVL ACSH+GLV+EG
Sbjct: 344 GHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEG 403

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
              F  M  E  + P+ EHYACMVDLL R G L EA   I  M + P   +WG+LL  CR
Sbjct: 404 KMLFESM-VEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACR 462

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
           IH  V+ AE    H+F+LEP N G YVLLA++YA A+   +V  L+E +    L+K  GC
Sbjct: 463 IHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEEHALEKVTGC 522

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVA 758
           SWIE+K K++ F +  + +P  +++++L+     +MK +GY P T   L + +  EKE  
Sbjct: 523 SWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLYDIEGEEKERI 582

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
           L GHSEKLA+AFG++N  +G+ IR+TKNLR+C DCH + KF+SK   REIV+RD NRFHH
Sbjct: 583 LIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREIVVRDVNRFHH 642

Query: 819 FKDGRCSCRGFW 830
           F+DG CSC  +W
Sbjct: 643 FRDGVCSCGDYW 654



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 201/449 (44%), Gaps = 50/449 (11%)

Query: 38  VSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK 97
           V +K  +     P+S+S       +  N N  I   C  G L +A  +L          +
Sbjct: 19  VGAKRQTLTRCRPLSSSPGAA---QPANANHLIQTLCANGRLARAAALLPGLPAPT--QR 73

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           TY S+L   A  +       VH  +    +   D  L ++L+  +   G L   R+VF++
Sbjct: 74  TYESLLLAAARARDAALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALGALPAARQVFDE 133

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CLAVVGN--- 213
                +F+WN L+   +   +  E+L     M  LG+  DSY+++  LK C+AV  +   
Sbjct: 134 TPVKNIFVWNALLKALALADHGDEALARLADMGRLGVPVDSYSYTHGLKACIAVSASHAP 193

Query: 214 -SRRVKDAH--------------------------------KLFDELSDRDVVSWNCMIS 240
            S RV++ H                                 +F  + +R+VVSW+ MI 
Sbjct: 194 ASARVREVHAHAIRRGYALHTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIG 253

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLA----TMVTVLSGCANCGALMFGRAVHAFALKA 296
            Y  N      +E+FK+M  +  + DL     T+V+VL+ CA   AL  G+ +HA+ L+ 
Sbjct: 254 CYAKNERPADAIELFKDM--MASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRR 311

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE-RSVVSWTSMIAGYAREGVFDGAIRL 355
            F   +S  N L+ MY +CG L+    +F+ +G  R VVSW S+I+GY   G    A+++
Sbjct: 312 GFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQV 371

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           F  M+  G  P +    S+L AC+  GL+  GK + + + E  +         ++D+  +
Sbjct: 372 FEEMIHVGFSPSIITFISVLGACSHAGLVNEGKMLFESMVEYGVTPRAEHYACMVDLLGR 431

Query: 416 CGSMADAESVFNQMPVKDIVS-WNTMIGA 443
            G + +A  +   M ++     W  ++GA
Sbjct: 432 AGQLDEAMELIRSMHIEPSPQVWGALLGA 460


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 268/825 (32%), Positives = 404/825 (48%), Gaps = 76/825 (9%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQ-LCADLKSLEDGKKVHSI 121
            ++NA I    E G    AM +      E  + ++ T  +IL  L A        +  H  
Sbjct: 301  SWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGR 360

Query: 122  ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID-NGKVFIWNLLMHEYSKTGNFK 180
            I ESG  + D V+G+ ++ M+  CG       VF +I     V  WN ++       +F 
Sbjct: 361  IWESG-YLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFG 419

Query: 181  ESLYLFKKMQSLGIAADSYTFSCVL-------------KCLAVVGNSRR----------- 216
            + +  F  M   GI  +  +F  +L             K  +++   RR           
Sbjct: 420  KVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATML 479

Query: 217  ---------VKDAHKLFDE--LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                     + +A  +F E  L  R +V+WN M+  Y  N  +++      EML  G   
Sbjct: 480  VSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLP 539

Query: 266  DLATMVTVLSGCANCGALMFGRAVHAFALKACF----SKEISFNNTLLDMYSKCGDLDGA 321
            D  +  +VLS C  C       +  A  L+ C      +       L+ M+ +C +L+ A
Sbjct: 540  DALSFTSVLSSC-YC-------SQEAQVLRMCILESGYRSACLETALISMHGRCRELEQA 591

Query: 322  IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
              VF +M    VVSWT+M++  A    F     LFR M  EG+ PD + + + L  C   
Sbjct: 592  RSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLAS 651

Query: 382  GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
              L +GK +H  + E  +++ + V NAL++MY+ CG   +A S F  M  +D+VSWN M 
Sbjct: 652  TTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMS 711

Query: 442  GA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
             A          + LF  M L+  +PD +T +  L      A +  G+  H      G+ 
Sbjct: 712  AAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLD 771

Query: 491  ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI-----MIAGYGMHGFGCDAIA 545
            +D +VA  +V +Y KCG L  A SLF     +    WT+     +I     HGF  +A+ 
Sbjct: 772  SDVSVATGLVKLYAKCGKLDEAMSLF-----RGACDWTVVLLNAIIGALAQHGFSEEAVK 826

Query: 546  TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLL 605
             F  M+Q G+ PD  + +S++ AC H+G+V+EG   F  M+    I P LEHYAC VDLL
Sbjct: 827  MFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLL 886

Query: 606  SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV 665
             R G L  A + I  MP   +  +W SLL  C++  + +L E+ A+ + EL+P N+  +V
Sbjct: 887  GRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHV 946

Query: 666  LLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIES 725
            +L+N+Y    KW++    R+K+    +K  PG SW EI  +V+ FVAG  SHP   +I  
Sbjct: 947  VLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYV 1006

Query: 726  LLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTK 785
            +L +L L M+R GY  +    L   DE+ KE AL  HSE++A+AFG++  P   T+++ K
Sbjct: 1007 VLDKLELLMRRAGY--EADKGLDVEDEL-KEKALGYHSERIAIAFGLIATPPETTLKIVK 1063

Query: 786  NLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            NLRVCGDCH   K++S    REI++RDS RFHHF +G CSC+  W
Sbjct: 1064 NLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 174/609 (28%), Positives = 272/609 (44%), Gaps = 104/609 (17%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D + Y ++LQ C D   L  GK  H +I  +G+                           
Sbjct: 24  DLQEYTALLQSCVDSNDLAKGKHAHELIANAGL--------------------------- 56

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
                   +F+ N L++ Y + G+ +E                                 
Sbjct: 57  -----EQHLFLGNCLINMYVRCGSLEE--------------------------------- 78

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTV 273
                AH +F ++ +R+VVSW  +IS     G   +   +F+ M L      +  T+V +
Sbjct: 79  -----AHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAM 133

Query: 274 LSGCANCGALMFGRAVHA----FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           L+ CAN   L  GR++HA      L+   +      N +++MY+KCG L+ AI VF  + 
Sbjct: 134 LNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIP 193

Query: 330 ERSVVSWTSMIAGYAREGVF-DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
           E+ VVSWT+M   YA+E  F   A+R+FR M+ + + P+V    + L AC     L  G 
Sbjct: 194 EKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGT 250

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK---DIVSWNTMIG--- 442
            +H  + E  +      SNAL++MY KCG    A SVF  M  +   D+VSWN MI    
Sbjct: 251 WLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASV 310

Query: 443 -------ALDLFVAM-LQNFEPDGVTMACILPA-CASLAALERGREIHGYILRHGISADR 493
                  A+ +F  + L+   P+ VT+  IL A  AS       R  HG I   G   D 
Sbjct: 311 EAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDV 370

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMI-AGYGMHGFGCDAIATFNDMR 551
            + NAI+ MY KCG    A ++F  I  K D+ISW  M+ A      FG   + TF+ M 
Sbjct: 371 VIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFG-KVVNTFHHML 429

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM--RYECNIEPKLEHYACMVDLLSRTG 609
            AGI+P++VSFI++L ACS+S  +D G +  +++  R    +E  +     +V +  + G
Sbjct: 430 LAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVA--TMLVSMYGKCG 487

Query: 610 NLSEAYRFIEMMPVAPDATI-WGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVL 666
           ++SEA    + MP+   + + W  +L     +   K A      + +  + PD   +  +
Sbjct: 488 SISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSV 547

Query: 667 LANVYAEAE 675
           L++ Y   E
Sbjct: 548 LSSCYCSQE 556



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 154/619 (24%), Positives = 289/619 (46%), Gaps = 67/619 (10%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           NA+ G F     L + M +L SS  +  ++ T  ++L  CA+ + L  G+ +H++I E G
Sbjct: 101 NAQCGAFARAFALFRTM-LLESS--AAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELG 157

Query: 127 I---VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF-KES 182
           +        ++G+ ++ M+  CG L++   VF  I    V  W  +   Y++   F  ++
Sbjct: 158 LERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDA 217

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC-----------------------------LAVVGN 213
           L +F++M    +A +  TF   L                               + + G 
Sbjct: 218 LRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGK 277

Query: 214 SRRVKDAHKLFDELSDR---DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
               + A+ +F  ++ R   D+VSWN MIS  +  G     + +F+ +   G   +  T+
Sbjct: 278 CGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTL 337

Query: 271 VTVLSGCANCGALMFG--RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           +T+L+  A  G + FG  R  H    ++ + +++   N ++ MY+KCG    A  VF ++
Sbjct: 338 ITILNALAASG-VDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRI 396

Query: 329 GER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
             +  V+SW +M+        F   +  F  M+  GI+P+  +  +IL+AC+    L+ G
Sbjct: 397 RWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFG 456

Query: 388 KDVHDYI---KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV--KDIVSWNTMIG 442
           + +H  I   + + ++SS  V+  L+ MY KCGS+++AE VF +MP+  + +V+WN M+G
Sbjct: 457 RKIHSLILTRRRDYVESS--VATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLG 514

Query: 443 AL-------DLFVAMLQNFE----PDGVTMACILPACASLAALERGREIHGYILRHGISA 491
           A        + F A+++  +    PD ++   +L +C      +  + +   IL  G  +
Sbjct: 515 AYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---YCSQEAQVLRMCILESGYRS 571

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
              +  A++ M+ +C  L  ARS+F+ +   D++SWT M++    +    +    F  M+
Sbjct: 572 -ACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQ 630

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
             G+ PD+ +  + L  C  S  +  G +  +    E  +E  +     ++++ S  G+ 
Sbjct: 631 LEGVIPDKFTLATTLDTCLASTTLGLG-KVIHACVTEIGLEADIAVENALLNMYSNCGDW 689

Query: 612 SEAYRFIEMMPVAPDATIW 630
            EA  F E M  A D   W
Sbjct: 690 REALSFFETMK-ARDLVSW 707



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 233/523 (44%), Gaps = 45/523 (8%)

Query: 61  CKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKV 118
           C   ++N  +G   +  +  K +   +    + ID    ++ +IL  C++ ++L+ G+K+
Sbjct: 400 CDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKI 459

Query: 119 HSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK--IDNGKVFIWNLLMHEYSKT 176
           HS+I        +  + + LV M+  CG + E   VF +  + +  +  WN+++  Y++ 
Sbjct: 460 HSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQN 519

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLK-----------------------CLAVV-- 211
              KE+     +M   G+  D+ +F+ VL                        CL     
Sbjct: 520 DRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALI 579

Query: 212 ---GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
              G  R ++ A  +F+E+   DVVSW  M+S    N   ++   +F+ M   G   D  
Sbjct: 580 SMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKF 639

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+ T L  C     L  G+ +HA   +     +I+  N LL+MYS CGD   A+  FE M
Sbjct: 640 TLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             R +VSW  M A YA+ G+   A+ LFR M  EG++PD    ++ L+      L+  GK
Sbjct: 700 KARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGK 759

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---- 444
             H    E+ + S + V+  L+ +YAKCG + +A S+F       +V  N +IGAL    
Sbjct: 760 LFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHG 819

Query: 445 ------DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVA 496
                  +F  M Q    PD  T+  I+ AC     +E G      +  + GIS      
Sbjct: 820 FSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHY 879

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKD-LISWTIMIAGYGMHG 538
              VD+  + G L  A  +   +P +D  + WT ++    + G
Sbjct: 880 ACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQG 922



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 21/281 (7%)

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
           G VR     D+   T++L +C     L  GK  H+ I    ++  L++ N L++MY +CG
Sbjct: 15  GAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCG 74

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML--QNFEPDGVTMACIL 465
           S+ +A ++F++M  +++VSW  +I           A  LF  ML   +  P+  T+  +L
Sbjct: 75  SLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAML 134

Query: 466 PACASLAALERGREIHGYILRHGISADRNVA----NAIVDMYVKCGVLVLARSLFDMIPA 521
            ACA+   L  GR IH  I   G+      A    NA+++MY KCG L  A ++F  IP 
Sbjct: 135 NACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPE 194

Query: 522 KDLISWTIMIAGYGMH-GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR 580
           KD++SWT M   Y     F  DA+  F +M    + P+ ++FI+ L AC  + L D  W 
Sbjct: 195 KDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC--TSLRDGTWL 252

Query: 581 FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
              +       +P   +   ++++  + G+   AY   + M
Sbjct: 253 HSLLHEASLGFDPLASN--ALINMYGKCGDWEGAYSVFKAM 291


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/752 (32%), Positives = 383/752 (50%), Gaps = 66/752 (8%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           L + L+  +   G     RR+ +++       +NLL+  YS+ G    SL    + +  G
Sbjct: 45  LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG 104

Query: 194 IAADSYTFSCVLKCLAVVGNSR--------------------------------RVKDAH 221
           +  D ++++  L   +  G+ R                                 + +A 
Sbjct: 105 VDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEAR 164

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           ++FD   +RD VSWN ++SGY+  G  E+ + VF  M   G  ++   + +V+  C+  G
Sbjct: 165 RVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRG 224

Query: 282 --ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              +    AVH   +KA    ++   + ++DMY+K G L  A  +F  + E +VV + +M
Sbjct: 225 DGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTM 284

Query: 340 IAGYAREGVFDG------AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           IAG+ R     G      A+ L+  +   G++P  +  +S+L AC   G LE GK +H  
Sbjct: 285 IAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQ 344

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           + +   Q   ++ +AL+D+Y   G M D    F   P  DIV+W  M+           A
Sbjct: 345 VIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKA 404

Query: 444 LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           L LF   L    +PD  T++ ++ ACASLA    G +I  +  + G      + N+ V M
Sbjct: 405 LSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHM 464

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y + G +  A   F  + + D++SW+ +I+ +  HG   DA+  F++M  A + P+E++F
Sbjct: 465 YARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITF 524

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           + VL ACSH GLVDEG R++  M  +  + P ++H  C+VDLL R G L++A  FI    
Sbjct: 525 LGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSI 584

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
              D  IW SLL  CRIH +++  + VA  + ELEP ++  YV+L N+Y +A +     K
Sbjct: 585 FHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASK 644

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK----KIESLLKRLRLEMKREG 738
            R+ + +RG+KK PG SWIE+K  V+ FVAG  SHP +     K+E +L R+      + 
Sbjct: 645 TRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLATTDT 704

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
              K    L+N            HSEKLA+A G+++LP    IRV KNLRVC DCH   K
Sbjct: 705 EISKREQNLMNC-----------HSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMK 753

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +SK+  REI+LRD  RFHHF+DG CSC  +W
Sbjct: 754 LISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/529 (23%), Positives = 237/529 (44%), Gaps = 58/529 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  +   G    ++E L  + ++ +D    +Y + L  C+    L  G+ VH++ 
Sbjct: 76  SFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALA 135

Query: 123 CESGIVIDDGVLGSK-LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
              G+    GV  S  LV M+  CG++ E RRVF+  +      WN L+  Y + G  +E
Sbjct: 136 ILDGL--SSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREE 193

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR-------------------------- 215
            + +F  M+  G+  +S+    V+KC +  G+                            
Sbjct: 194 MVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAM 253

Query: 216 --------RVKDAHKLFDELSDRDVVSWNCMISGY------IANGVAEKGLEVFKEMLNL 261
                    + +A  LF  + + +VV +N MI+G+      I   VA + L ++ E+ + 
Sbjct: 254 IDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSR 313

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G      T  +VL  C   G L FG+ +H   +K  F ++    + L+D+Y   G ++  
Sbjct: 314 GMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDG 373

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            R F    +  +V+WT+M++G  +  + + A+ LF   +  G++PD++ I+S+++ACA  
Sbjct: 374 FRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASL 433

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
            +   G+ +  +  ++       + N+ + MYA+ G +  A   F +M   D+VSW+ +I
Sbjct: 434 AVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVI 493

Query: 442 G----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGI 489
                      AL  F  M+     P+ +T   +L AC+    ++ G   +  + + +G+
Sbjct: 494 SCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGL 553

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMH 537
           S        +VD+  + G L  A +   + I   D + W  ++A   +H
Sbjct: 554 SPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIH 602


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/696 (34%), Positives = 396/696 (56%), Gaps = 44/696 (6%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  +++ C  L ++     VH      G  +D    GS L+ ++   G +++ RRV
Sbjct: 111 DKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDL-FAGSALIKLYADNGYIRDARRV 169

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN- 213
           F+++      +WN+++  Y K+G+F  ++  F +M++     +S T++C+L   A  GN 
Sbjct: 170 FDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNF 229

Query: 214 -----------------SRRVKD--------------AHKLFDELSDRDVVSWNCMISGY 242
                              +V +              A KLF+ +   D V+WN +I+GY
Sbjct: 230 CAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGY 289

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
           + NG  ++   +F  M++ G   D  T  + L      G+L   + VH++ ++     ++
Sbjct: 290 VQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDV 349

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
              + L+D+Y K GD++ A ++F++     V   T+MI+GY   G+   AI  FR +++E
Sbjct: 350 YLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQE 409

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G+  +   + S+L ACA    L+ GK++H +I +  +++ + V +A+ DMYAKCG +  A
Sbjct: 410 GMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLA 469

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
              F +M  +D V WN+MI           A+DLF  M +   + D V+++  L A A+L
Sbjct: 470 YEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANL 529

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            AL  G+E+HGY++R+  S+D  VA+ ++DMY KCG L LA  +F+++  K+ +SW  +I
Sbjct: 530 PALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSII 589

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           A YG HG   + +  +++M +AGI PD V+F+ ++ AC H+GLVDEG  +F+ M  E  I
Sbjct: 590 AAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGI 649

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
             ++EHYACMVDL  R G + EA+  I+ MP  PDA +WG+LL  CR+H  V+LA+  + 
Sbjct: 650 GARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASR 709

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
           H+ EL+P N+GYYVLL+NV+A+A +W  V K+R  +  +G++K PG SWI++ G  ++F 
Sbjct: 710 HLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFS 769

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
           A   +HP + +I  +LK L LE++++GY P+    L
Sbjct: 770 AADGNHPESVEIYLILKSLLLELRKQGYVPQPYLPL 805



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 174/611 (28%), Positives = 286/611 (46%), Gaps = 66/611 (10%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S+ + C+D   ++  ++VH+ +   G+  D     S+++ ++V CG  ++   +F +++ 
Sbjct: 16  SLFRACSDASMVQQARQVHTQVIVGGMG-DVCAPSSRVLGLYVLCGRFRDAGNLFFELEL 74

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK----------CLAV 210
                WN ++      G F  +L  + KM    ++ D YTF  V+K          C+ V
Sbjct: 75  RYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVV 134

Query: 211 VGNSRR----------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
              +R                       ++DA ++FDEL  RD + WN M+ GY+ +G  
Sbjct: 135 HDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDF 194

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           +  +  F EM      V+  T   +LS CA  G    G  +H   + + F  +    NTL
Sbjct: 195 DNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTL 254

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           + MYSKCG+L  A ++F  M +   V+W  +IAGY + G  D A  LF  M+  G++PD 
Sbjct: 255 VAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDS 314

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               S L +    G L   K+VH YI  + +   +Y+ +AL+D+Y K G +  A  +F Q
Sbjct: 315 VTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQ 374

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG 477
             + D+     MI           A++ F  ++Q     + +TMA +LPACA++AAL+ G
Sbjct: 375 NILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPG 434

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           +E+H +IL+  +    NV +AI DMY KCG L LA   F  +  +D + W  MI+ +  +
Sbjct: 435 KELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQN 494

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACS-----HSGLVDEGWRFFNMMRYECNIE 592
           G    AI  F  M  +G + D VS  S L A +     + G    G+   N    +  + 
Sbjct: 495 GKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVA 554

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC-----GCR-----IHHE 642
             L      +D+ S+ GNL+ A+    +M    +   W S++      GC      ++HE
Sbjct: 555 STL------IDMYSKCGNLALAWCVFNLMD-GKNEVSWNSIIAAYGNHGCPRECLDLYHE 607

Query: 643 VKLAEKVAEHV 653
           +  A    +HV
Sbjct: 608 MLRAGIHPDHV 618



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 157/522 (30%), Positives = 242/522 (46%), Gaps = 57/522 (10%)

Query: 62  KTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           K+ +++  IG FCE+            +  S +++ TY  IL +CA   +   G ++H +
Sbjct: 190 KSGDFDNAIGTFCEM-----------RTSYSMVNSVTYTCILSICATRGNFCAGTQLHGL 238

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +  SG   D  V  + LV M+  CG+L   R++FN +       WN L+  Y + G   E
Sbjct: 239 VIGSGFEFDPQV-ANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDE 297

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------- 221
           +  LF  M S G+  DS TF+  L  +   G+ R  K+ H                    
Sbjct: 298 AAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALID 357

Query: 222 ------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                       K+F +    DV     MISGY+ +G+    +  F+ ++  G   +  T
Sbjct: 358 VYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLT 417

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           M +VL  CA   AL  G+ +H   LK      ++  + + DMY+KCG LD A   F +M 
Sbjct: 418 MASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS 477

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           +R  V W SMI+ +++ G  + AI LFR M   G + D  +++S L A A    L  GK+
Sbjct: 478 DRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKE 537

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA------ 443
           +H Y+  N   S  +V++ L+DMY+KCG++A A  VFN M  K+ VSWN++I A      
Sbjct: 538 MHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGC 597

Query: 444 ----LDLFVAMLQ-NFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVAN 497
               LDL+  ML+    PD VT   I+ AC     ++ G    H     +GI A      
Sbjct: 598 PRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYA 657

Query: 498 AIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
            +VD+Y + G +  A      +P   D   W  ++    +HG
Sbjct: 658 CMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHG 699



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 15/287 (5%)

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           E ++     + S+  AC+   +++  + VH  +    M      S+ ++ +Y  CG   D
Sbjct: 5   ETLDSLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRD 64

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACAS 470
           A ++F ++ ++  + WN MI           AL  +  ML  N  PD  T   ++ AC  
Sbjct: 65  AGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGG 124

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           L  +     +H      G   D    +A++ +Y   G +  AR +FD +P +D I W +M
Sbjct: 125 LNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVM 184

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM-MRYEC 589
           + GY   G   +AI TF +MR +    + V++  +L  C+  G    G +   + +    
Sbjct: 185 LRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGF 244

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
             +P++ +   +V + S+ GNL  A +    MP   D   W  L+ G
Sbjct: 245 EFDPQVAN--TLVAMYSKCGNLLYARKLFNTMP-QTDTVTWNGLIAG 288


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/752 (32%), Positives = 383/752 (50%), Gaps = 66/752 (8%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           L + L+  +   G     RR+ +++       +NLL+  YS+ G    SL    + +  G
Sbjct: 45  LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG 104

Query: 194 IAADSYTFSCVLKCLAVVGNSR--------------------------------RVKDAH 221
           +  D ++++  L   +  G+ R                                 + +A 
Sbjct: 105 VDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEAR 164

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           ++FD   +RD VSWN ++SGY+  G  E+ + VF  M   G  ++   + +V+  C+  G
Sbjct: 165 RVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRG 224

Query: 282 --ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              +    AVH   +KA    ++   + ++DMY+K G L  A  +F  + E +VV + +M
Sbjct: 225 DGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTM 284

Query: 340 IAGYAREGVFDG------AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           IAG+ R     G      A+ L+  +   G++P  +  +S+L AC   G LE GK +H  
Sbjct: 285 IAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQ 344

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           + +   Q   ++ +AL+D+Y   G M D    F   P  DIV+W  M+           A
Sbjct: 345 VIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKA 404

Query: 444 LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           L LF   L    +PD  T++ ++ ACASLA    G +I  +  + G      + N+ V M
Sbjct: 405 LSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHM 464

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y + G +  A   F  + + D++SW+ +I+ +  HG   DA+  F++M  A + P+E++F
Sbjct: 465 YARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITF 524

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           + VL ACSH GLVDEG R++  M  +  + P ++H  C+VDLL R G L++A  FI    
Sbjct: 525 LGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGI 584

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
              D  IW SLL  CRIH +++  + VA  + ELEP ++  YV+L N+Y +A +     K
Sbjct: 585 FHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASK 644

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAK----KIESLLKRLRLEMKREG 738
            R+ + +RG+KK PG SWIE+K  V+ FVAG  SHP +     K+E +L R+      + 
Sbjct: 645 TRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLATTDT 704

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
              K    L+N            HSEKLA+A G+++LP    IRV KNLRVC DCH   K
Sbjct: 705 EISKREQNLMNC-----------HSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMK 753

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +SK+  REI+LRD  RFHHF+DG CSC  +W
Sbjct: 754 LISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 125/529 (23%), Positives = 237/529 (44%), Gaps = 58/529 (10%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  +   G    ++E L  + ++ +D    +Y + L  C+    L  G+ VH++ 
Sbjct: 76  SFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALA 135

Query: 123 CESGIVIDDGVLGSK-LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
              G+    GV  S  LV M+  CG++ E RRVF+  +      WN L+  Y + G  +E
Sbjct: 136 ILDGL--SSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREE 193

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR-------------------------- 215
            + +F  M+  G+  +S+    V+KC +  G+                            
Sbjct: 194 MVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAM 253

Query: 216 --------RVKDAHKLFDELSDRDVVSWNCMISGY------IANGVAEKGLEVFKEMLNL 261
                    + +A  LF  + + +VV +N MI+G+      I   VA + L ++ E+ + 
Sbjct: 254 IDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSR 313

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G      T  +VL  C   G L FG+ +H   +K  F ++    + L+D+Y   G ++  
Sbjct: 314 GMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDG 373

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            R F    +  +V+WT+M++G  +  + + A+ LF   +  G++PD++ I+S+++ACA  
Sbjct: 374 FRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASL 433

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
            +   G+ +  +  ++       + N+ + MYA+ G +  A   F +M   D+VSW+ +I
Sbjct: 434 AVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVI 493

Query: 442 G----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGI 489
                      AL  F  M+     P+ +T   +L AC+    ++ G   +  + + +G+
Sbjct: 494 SCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGL 553

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMH 537
           S        +VD+  + G L  A +   + I   D + W  ++A   +H
Sbjct: 554 SPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIH 602


>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 640

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/672 (36%), Positives = 364/672 (54%), Gaps = 56/672 (8%)

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFS-CVLKCLAVVGNSRRVKDAHKLFDELSDRDV 232
           SK  + K +  +  ++   G+  D   F   +L C   + ++  +  A +LF    + D 
Sbjct: 10  SKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDA--LHYALRLFHHFPNPDT 67

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
              N +I     +      L  F ++      + D  T    L   AN   L  G  +H+
Sbjct: 68  FMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHS 127

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
            A +  F   I    TL+ MY++CGD   A RVF++M E +VV+W +++    R G  +G
Sbjct: 128 QAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEG 187

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           A              DV+    + +  + +G+L                           
Sbjct: 188 A-------------QDVFGCMPVRNLTSWNGMLA-------------------------- 208

Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGVT 460
            YAK G +  A  VF +MP++D VSW+TMI           A   F  +L +    + V+
Sbjct: 209 GYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVS 268

Query: 461 MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           +  +L ACA   A E G+ +HG++ + G     +V NA++D Y KCG + +AR +F  +P
Sbjct: 269 LTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMP 328

Query: 521 -AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
            A+ ++SWT +IAG  MHG G +AI  F++M ++G+ PD ++FIS+LYACSHSGLV+EG 
Sbjct: 329 VARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGC 388

Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
             F+ M+    IEP +EHY CMVDL  R   L +AY FI  MPV+P+A IW +LL  C I
Sbjct: 389 GLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSI 448

Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
           H  +++AE V   + E++PDN+G +VLL+NVYA A KW++V  +R  ++   +KK PG S
Sbjct: 449 HGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWS 508

Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE-GYFPKTRYALINADEMEKEVA 758
            IEI   +  FVAG   +   ++    L+ + L ++ E GY P+ R  L + +E EKE +
Sbjct: 509 MIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEEKEDS 568

Query: 759 LCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHH 818
           +  HSEKLA AFGI  LP G+ +R+ KNLRVCGDCH + K +SK  + EI++RD +RFH 
Sbjct: 569 VSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRFHS 628

Query: 819 FKDGRCSCRGFW 830
           FKDG CSCR +W
Sbjct: 629 FKDGFCSCRDYW 640



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 144/483 (29%), Positives = 232/483 (48%), Gaps = 38/483 (7%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD-LKEGRRVF 155
           + + S+L  C+ LK     K++H+ IC++G+  D  V G  L+   +T  D L    R+F
Sbjct: 3   EAWVSLLSKCSSLKPT---KQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLF 59

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSCVLKCLAVVGNS 214
           +   N   F+ N L+   S +     SL+ F +++    ++ DS+TF+  LK +A   NS
Sbjct: 60  HHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVA---NS 116

Query: 215 RRVKDAHKL----FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
           R ++   +L    F    D  +     +IS Y   G +     VF EM       ++ T 
Sbjct: 117 RHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSE----PNVVTW 172

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFS-KEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
             VL+    CG +   + V       C   + ++  N +L  Y+K G+L  A RVF +M 
Sbjct: 173 NAVLTAAFRCGDVEGAQDVFG-----CMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMP 227

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            R  VSW++MI G+A  G FD A   FR ++RE I  +  ++T +L ACA  G  E GK 
Sbjct: 228 LRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKI 287

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIG------ 442
           +H ++++        V+NAL+D Y+KCG++A A  VF  MPV + IVSW ++I       
Sbjct: 288 LHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHG 347

Query: 443 ----ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVA 496
               A+ LF  M ++   PDG+T   +L AC+    +E G  +   +   +GI       
Sbjct: 348 CGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHY 407

Query: 497 NAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
             +VD+Y +   L  A      +P + + I W  ++    +H  G   +A     R A +
Sbjct: 408 GCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIH--GNIEMAELVKARLAEM 465

Query: 556 EPD 558
           +PD
Sbjct: 466 DPD 468


>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/527 (42%), Positives = 321/527 (60%), Gaps = 18/527 (3%)

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           A R F+++ + + V  T+M +GY R  +   ++ LFR M+       V    +++   A 
Sbjct: 3   ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSAS 62

Query: 381 DGLLEIG--KDVHDYIKENDMQSSLYVSNALMDMYAKCGS--MADAESVFNQMPVKDIVS 436
             + + G    +H  I +   + +  V N ++D YAK GS  +  A  VF+ M  +D+VS
Sbjct: 63  ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVS 121

Query: 437 WNTMIG----------ALDLFVAMLQ---NFEPDGVTMACILPACASLAALERGREIHGY 483
           WN+MI           A+ L+  ML      + + V ++ +L ACA   A++ G+ IH  
Sbjct: 122 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQ 181

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
           ++R G+  +  V  +IVDMY KCG + +A   F  I  K+++SW+ MI GYGMHG G +A
Sbjct: 182 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 241

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           +  F +M+++G+ P+ ++FISVL ACSH+GL+DEG  ++N M+ E  IE  +EHY CMVD
Sbjct: 242 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVD 301

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY 663
           LL R G L EAY  I+ M V PDA IWG+LL  CRIH  V+LAE   + +FEL+  N+GY
Sbjct: 302 LLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGY 361

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
           YVLL+N+YAEA  W++V+++R  +  R ++K PG S  E+KGK+ +F  G  SHP   +I
Sbjct: 362 YVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEI 421

Query: 724 ESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRV 783
            S L++L   M+  GY P T   L + DE EKE AL  HSEKLA+AF ++N      I +
Sbjct: 422 YSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHI 481

Query: 784 TKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KNLRVC DCH   KF++K   REI++RD  RFHHFKDG CSCR +W
Sbjct: 482 IKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 175/338 (51%), Gaps = 20/338 (5%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSG 276
           DA + FDE+ D + V    M SGY+ N +    LE+F+ M+  +    VD A  +   S 
Sbjct: 2   DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG--DLDGAIRVFEKMGERSVV 334
            A         ++HA   K  F +     NT+LD Y+K G  DL+ A +VF+ M ER VV
Sbjct: 62  SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVV 120

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGM--VREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           SW SMIA YA+ G+   AI L+  M  V  GI+ +  A++++L ACA  G ++ GK +H+
Sbjct: 121 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHN 180

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
            +    ++ ++YV  +++DMY+KCG +  A   F ++  K+I+SW+ MI           
Sbjct: 181 QVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQE 240

Query: 443 ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIV 500
           AL++F  M ++   P+ +T   +L AC+    L+ GR  +  + +  GI A       +V
Sbjct: 241 ALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMV 300

Query: 501 DMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           D+  + G L  A SL   +  K D   W  +++   +H
Sbjct: 301 DLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIH 338



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 138/236 (58%), Gaps = 5/236 (2%)

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLAT 269
           G SR ++ A K+FD + +RDVVSWN MI+ Y  NG++ + + ++ +MLN+G  +  +   
Sbjct: 100 GGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVA 158

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +  VL  CA+ GA+  G+ +H   ++    + +    +++DMYSKCG ++ A R F K+ 
Sbjct: 159 LSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 218

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           E++++SW++MI GY   G    A+ +F  M R G+ P+     S+L AC+  GLL+ G+ 
Sbjct: 219 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRY 278

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            ++ +K+   +++ +     ++D+  + G + +A S+  +M VK D   W  ++ A
Sbjct: 279 WYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 334



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 10/189 (5%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +     ++L  CA   +++ GK +H+ +   G+  ++  +G+ +V M+  CG ++   
Sbjct: 153 KCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLE-ENVYVGTSIVDMYSKCGRVEMAS 211

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           R F KI    +  W+ ++  Y   G  +E+L +F +M+  G+  +  TF  VL   +  G
Sbjct: 212 RAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAG 271

Query: 213 ---NSRRVKDAHKLFDELS-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                R   +A K   E   +  V  + CM+      G  ++   + KEM       D A
Sbjct: 272 LLDEGRYWYNAMK--QEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEM---KVKPDAA 326

Query: 269 TMVTVLSGC 277
               +LS C
Sbjct: 327 IWGALLSAC 335


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/664 (37%), Positives = 377/664 (56%), Gaps = 47/664 (7%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           ++D  T+  +L+LC+D   +  G +VH ++ + G   D  V G+ L+ ++  CG L + R
Sbjct: 156 QLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYV-GNTLLMLYGNCGFLNDAR 214

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKES--LYLFKKMQS------------LGIAA-- 196
           R+F+++    V  WN ++   S  G++ E+   Y +  ++S            L I+A  
Sbjct: 215 RLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAAL 274

Query: 197 ---------DSYTF-----SCVLKCLAVV---GNSRRVKDAHKLFDELSDRDVVSWNCMI 239
                      Y+      S V  C A+V   G    VK   ++F+E  +++ VSWN +I
Sbjct: 275 EDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSII 334

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           +G    G     L  F+ M++ G   +  T+ ++L           G+ +H F+++    
Sbjct: 335 NGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTE 394

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +I   N+L+DMY+K G    A  +F  +  R++VSW +MIA YA   +   AIR    M
Sbjct: 395 TDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQM 454

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
              G  P+    T++L ACA  G L  GK++H       + S L+VSN+L+DMYAKCG +
Sbjct: 455 QETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCL 514

Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPAC 468
             A +VFN    KD VS+N +I           +L+LF  M L   +PD V+   ++ AC
Sbjct: 515 HSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISAC 573

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A+LAAL++G+E+HG  LR+ + +   V+N+++D Y KCG + +A  LF+ I  KD+ SW 
Sbjct: 574 ANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWN 633

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI GYGM G    AI+ F  MR   ++ D VS+I+VL ACSH GLV+ GW++F+ M  +
Sbjct: 634 TMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ 693

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             +EP   HY CMVDLL R G + EA + I+ +P+APDA IWG+LL  CRI+  V+L  +
Sbjct: 694 -RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRR 752

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            AEH+FEL+P + GYY+LL+N+YAE  +W+E  K+RE +  RG KKNPGCSW++I  +V+
Sbjct: 753 AAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVH 812

Query: 709 IFVA 712
            FVA
Sbjct: 813 AFVA 816



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 172/620 (27%), Positives = 302/620 (48%), Gaps = 56/620 (9%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           + ++L LC+ ++SL   K+VH++   +G +     L + L+  +           +FN+ 
Sbjct: 57  HINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQT 116

Query: 159 DNG--KVFIWNLLM--HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-------- 206
                  F+WN L+  H  +  G F +    + +M   G+  D +TF  VLK        
Sbjct: 117 FQNCRTAFLWNTLIRAHSIAWNGTF-DGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDI 175

Query: 207 ------------------------CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                                    L + GN   + DA +LFDE+ +RDVVSWN +I   
Sbjct: 176 CKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLL 235

Query: 243 IANG-VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
             NG   E     F  +L      +L +++++L   A        R +H +++K     +
Sbjct: 236 SVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQ 295

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           ++  N L+D Y KCG +    +VF +  E++ VSW S+I G A +G    A+  FR M+ 
Sbjct: 296 VTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMID 355

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
            G +P+   I+SIL         + GK++H +      ++ ++++N+L+DMYAK G   +
Sbjct: 356 AGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTE 415

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACAS 470
           A ++F+ +  ++IVSWN MI           A+   + M +  E P+ VT   +LPACA 
Sbjct: 416 ASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACAR 475

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           L  L  G+EIH   +R G+++D  V+N+++DMY KCG L  AR++F+    KD +S+ I+
Sbjct: 476 LGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNIL 534

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I GY        ++  F++MR  G +PD VSF+ V+ AC++   + +G +  + +    +
Sbjct: 535 IIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQG-KEVHGVALRNH 593

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           +   L     ++D  ++ G +  A R    + +  D   W +++ G  +  E+    + A
Sbjct: 594 LYSHLFVSNSLLDFYTKCGRIDIACRLFNQI-LFKDVASWNTMILGYGMIGEL----ETA 648

Query: 651 EHVFELEPDNTGYYVLLANV 670
             +FE   D+T  Y L++ +
Sbjct: 649 ISMFEAMRDDTVQYDLVSYI 668


>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 600

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 212/489 (43%), Positives = 301/489 (61%), Gaps = 13/489 (2%)

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
            +R M+R G+ P+ +    +L  CA  G L +GK VH  + +   +  ++V N L+ MY 
Sbjct: 112 FYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYC 171

Query: 415 KCGS--MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTM 461
             G      AE VF+  P  D V+W+ MI           A+DLF  M +    PD +TM
Sbjct: 172 CLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITM 231

Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
             +L ACA L ALE G+ +  Y+ +  I     + NA++DM+ KCG +  A  LF  + +
Sbjct: 232 VSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDS 291

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           + ++SWT +IAG  MHG G DA++ F++M + GI PD+V+FI VL ACSHSGLVD+G  +
Sbjct: 292 RTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYY 351

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
           F  M    +I PK+EHY CMVDLL R G + EA+ F++ MP  P+  IW +++  C    
Sbjct: 352 FGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATG 411

Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
           E+KL E +++ + + EP +   YVLL+N+YA+  +WE+  K+RE +  RG+KK PG + I
Sbjct: 412 ELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMI 471

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCG 761
           E+  ++  FVAG  SH   K+I  ++  +  E+K+ GY P T   L++ DE +KE AL  
Sbjct: 472 EVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYR 531

Query: 762 HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKD 821
           HSEKLA+AF +LN P G +IR+ KNLRVC DCH   KF+SK   REIV+RD NRFHHFK+
Sbjct: 532 HSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKN 591

Query: 822 GRCSCRGFW 830
           G CSCR FW
Sbjct: 592 GLCSCRDFW 600



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 174/359 (48%), Gaps = 59/359 (16%)

Query: 164 FIWNLLMHEYSKTGNFKESLYLF-KKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH- 221
           F++N L+  YS+T + K + +LF + M   G+  + +TF  VLK  A +G+ R  K  H 
Sbjct: 90  FLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHG 149

Query: 222 ---------------------------------KLFDELSDRDVVSWNCMISGYIANGVA 248
                                            K+FD+    D V+W+ MI+G++  G +
Sbjct: 150 CVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCS 209

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
            + +++F+EM  +G   D  TMV+VLS CA+ GAL  G+ V ++  K    K +   N L
Sbjct: 210 SRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNAL 269

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           +DM++KCG++D AI++F +M  R++VSWTS+IAG A  G    A+ LF  MV  GI PD 
Sbjct: 270 IDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDD 329

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFN 427
            A   +L AC+  GL++ G+     ++ N  +   +     ++D+  + G + +A     
Sbjct: 330 VAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQ 389

Query: 428 QMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILR 486
           +MP                       FEP+ +    I+ AC +   L+ G  I   +++
Sbjct: 390 KMP-----------------------FEPNQIIWRTIITACHATGELKLGESISKELIK 425



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 164/331 (49%), Gaps = 18/331 (5%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF-KEMLNLGFNVDLATMVTVLSGCA 278
           +H         D   +N +I  Y     ++    +F + ML  G   +  T   VL GCA
Sbjct: 77  SHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCA 136

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG---AIRVFEKMGERSVVS 335
             G+L  G+ VH   +K  F +++   NTL+ MY   G+ DG   A +VF+   +   V+
Sbjct: 137 GIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGE-DGFEFAEKVFDDSPKMDTVT 195

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W++MIAG+ R G    A+ LFR M   G+ PD   + S+L ACA  G LE+GK V  Y++
Sbjct: 196 WSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVE 255

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           + ++  S+ + NAL+DM+AKCG++  A  +F QM  + IVSW ++I           A+ 
Sbjct: 256 KKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVS 315

Query: 446 LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIVDMY 503
           LF  M++N   PD V    +L AC+    +++GR   G + R+  I         +VD+ 
Sbjct: 316 LFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLL 375

Query: 504 VKCGVLVLARSLFDMIP-AKDLISWTIMIAG 533
            + G +  A      +P   + I W  +I  
Sbjct: 376 CRGGFVKEAFEFVQKMPFEPNQIIWRTIITA 406



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 150/383 (39%), Gaps = 77/383 (20%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD--LKEGRRVF 155
           T+  +L+ CA + SL  GK VH  + + G   D  VL + L+ M+   G+   +   +VF
Sbjct: 127 TFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNT-LIHMYCCLGEDGFEFAEKVF 185

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG--- 212
           +         W+ ++  + + G    ++ LF++MQ +G+  D  T   VL   A +G   
Sbjct: 186 DDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALE 245

Query: 213 -----------------------------NSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
                                            V  A KLF ++  R +VSW  +I+G  
Sbjct: 246 LGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLA 305

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS--KE 301
            +G     + +F EM+  G   D    + VLS C++ G +  GR     +++  FS   +
Sbjct: 306 MHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFG-SMERNFSIVPK 364

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +     ++D+  + G +  A    +KM                                 
Sbjct: 365 VEHYGCMVDLLCRGGFVKEAFEFVQKM--------------------------------- 391

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDV-HDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
              EP+     +I+ AC   G L++G+ +  + IK   M  S YV   L ++YAK     
Sbjct: 392 -PFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYV--LLSNIYAKLRQWE 448

Query: 421 DAESVFNQMPVKDI--VSWNTMI 441
               V   M ++ +  V  +TMI
Sbjct: 449 KKTKVREMMDMRGMKKVPGSTMI 471



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 127/289 (43%), Gaps = 21/289 (7%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
           T  ++A I  F  +G   +A+++    +   +  D  T  S+L  CADL +LE GK V S
Sbjct: 193 TVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVES 252

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            + E   +     L + L+ MF  CG++ +  ++F ++D+  +  W  ++   +  G   
Sbjct: 253 YV-EKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGL 311

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSW 235
           +++ LF +M   GI  D   F   +  L+   +S  V      F  +         V  +
Sbjct: 312 DAVSLFDEMVENGITPDDVAF---IGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHY 368

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
            CM+      G  ++  E  ++M    F  +     T+++ C   G L  G ++    +K
Sbjct: 369 GCMVDLLCRGGFVKEAFEFVQKM---PFEPNQIIWRTIITACHATGELKLGESISKELIK 425

Query: 296 ACFSKEISFNNTLL--DMYSKCGDLDGAIRVFEKMGERSV--VSWTSMI 340
              S+ +  +N +L  ++Y+K    +   +V E M  R +  V  ++MI
Sbjct: 426 ---SEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMI 471


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 249/777 (32%), Positives = 413/777 (53%), Gaps = 63/777 (8%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI---DTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
           I R    G+L  A+  L    +  I   D+ T+ S+L+ C   +    GK VH+ + E  
Sbjct: 33  ILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFD 92

Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN-GK--VFIWNLLMHEYSKTGNFKESL 183
           I   D VL + L+ ++   GD  +   VF  +   GK  V  W+ +M  Y   G   +++
Sbjct: 93  IE-PDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLA---VVGNSR------------------------- 215
            +F +   LG+  + Y ++ V++  +    VG  R                         
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211

Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                   ++A+K+FD++S+ +VV+W  MI+  +  G   + +  F +M+  GF  D  T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC---GDLDGAIRVFE 326
           + +V S CA    L  G+ +H++A+++    ++    +L+DMY+KC   G +D   +VF+
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFD 329

Query: 327 KMGERSVVSWTSMIAGYARE-GVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLL 384
           +M + SV+SWT++I GY +   +   AI LF  M+ +G +EP+ +  +S   AC      
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL 444
            +GK V     +  + S+  V+N+++ M+ K   M DA+  F  +  K++VS+NT +   
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449

Query: 445 DLFVAMLQNFE-----------PDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
              +   Q F+               T A +L   A++ ++ +G +IH  +++ G+S ++
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
            V NA++ MY KCG +  A  +F+ +  +++ISWT MI G+  HGF    + TFN M + 
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G++P+EV+++++L ACSH GLV EGWR FN M  +  I+PK+EHYACMVDLL R G L++
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629

Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
           A+ FI  MP   D  +W + L  CR+H   +L +  A  + EL+P+    Y+ L+N+YA 
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689

Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
           A KWEE  ++R K+  R L K  GCSWIE+  K++ F  G ++HP+A +I   L RL  E
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITE 749

Query: 734 MKREGYFPKTRYALINADEMEKEVA----LCGHSEKLAMAFGILNLPAGQTIRVTKN 786
           +KR GY P T   L   +E   E      L  HSEK+A+AFG+++    + +++ + 
Sbjct: 750 IKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPLKMIQT 806



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 139/583 (23%), Positives = 270/583 (46%), Gaps = 38/583 (6%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKV-----FIWNLLMHEYSKTGNFKESLYLFKK 188
           +  +L+   +  GDL+      + +    +       ++ L+    +  +F+    +  +
Sbjct: 28  VADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHAR 87

Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
           +    I  DS  ++ ++   +  G+S + +D  +       RDVVSW+ M++ Y  NG  
Sbjct: 88  LIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRE 147

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNT 307
              ++VF E L LG   +      V+  C+N   +  GR    F +K   F  ++    +
Sbjct: 148 LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS 207

Query: 308 LLDMYSKC-GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           L+DM+ K     + A +VF+KM E +VV+WT MI    + G    AIR F  MV  G E 
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC---GSMADAE 423
           D + ++S+  ACA    L +GK +H +   + +   +  S  L+DMYAKC   GS+ D  
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCR 325

Query: 424 SVFNQMPVKDIVSWNTMIG-----------ALDLFVAMLQ--NFEPDGVTMACILPACAS 470
            VF++M    ++SW  +I            A++LF  M+   + EP+  T +    AC +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           L+    G+++ G   + G++++ +VAN+++ M+VK   +  A+  F+ +  K+L+S+   
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM---MRY 587
           + G   +     A    +++ +  +     +F S+L   ++ G + +G +  +    +  
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH-HEVKLA 646
            CN +P       ++ + S+ G++  A R    M    +   W S++ G   H   +++ 
Sbjct: 506 SCN-QPVCN---ALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVL 560

Query: 647 EKVAEHVFE-LEPDNTGYYVLL---ANVYAEAEKWEEVKKLRE 685
           E   + + E ++P+   Y  +L   ++V   +E W     + E
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603


>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
 gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
          Length = 810

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/612 (37%), Positives = 341/612 (55%), Gaps = 47/612 (7%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANC 280
           + D   DR  V +N ++ G  A  +    L +F  M   G     D  T    L  CA  
Sbjct: 76  VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
             L+ GR +H+   +      +   ++ + MY++CG  D A ++FE+M  R VVSW +MI
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195

Query: 341 AGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           +G+A  G+F  A+ +FR +V  +  +PD   + SIL +        +GK           
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS--------MGK----------- 236

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
                         A+   +A  + VF++M  K ++SWN M+           A++LF+ 
Sbjct: 237 --------------ARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMR 282

Query: 450 MLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M ++  EPD VT+A +LP+C  ++AL  G+ IH  I R  + +   + NA++DMY  CG 
Sbjct: 283 MQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGC 342

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  AR +FD +  +D++SWT +I+ YG HG G +AI  F  M   G+EPD ++F+++L A
Sbjct: 343 LKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAA 402

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSH+GL+D G  +F  M  E +I PKLEHYACMVDLL R G + EAY FI +MP+ P+  
Sbjct: 403 CSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNER 462

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           +WG+LL  CRIH  + +    A+ +  L P  TGYYVLL+N+YA A +W +V  +R  + 
Sbjct: 463 VWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVME 522

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
            +G+KK PG S  E+  +V+ F  G +SHP +K I   L  L   ++  GY P+    L 
Sbjct: 523 SKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLH 582

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + +E +KE  L  HSEKLA+AF ++N   G  IR+T NLR C DCH  AK +S  A REI
Sbjct: 583 DVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGREI 642

Query: 809 VLRDSNRFHHFK 820
           +L+D NR H+ K
Sbjct: 643 ILKDVNRIHYMK 654



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 175/357 (49%), Gaps = 15/357 (4%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG--VLGSKLVFMFVTCGDLKEGR 152
           D  TY   L+ CA    L  G+++HS     G+   DG   +    + M+  CG   +  
Sbjct: 121 DHYTYPLALKSCAATDGLVLGRQIHSSTARLGL---DGNVFVAHSAISMYARCGRPDDAY 177

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA-ADSYTFSCVLKCLAVV 211
           ++F ++    V  WN ++  ++  G F  ++ +F+++ +L     D+ T + +L  +   
Sbjct: 178 QMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMG-- 235

Query: 212 GNSRRVKDAHKL---FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
               RV+D   L   FDE+  + ++SWN M++ Y  N +  + +E+F  M   G   D  
Sbjct: 236 --KARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAV 293

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+ TVL  C    AL  G+ +H    +      +   N L+DMY+ CG L  A  VF+ M
Sbjct: 294 TLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSM 353

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
           G R VVSWTS+I+ Y R G    AI LF  M  +G+EPD  A  +IL AC+  GLL++GK
Sbjct: 354 GTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGK 413

Query: 389 D-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
              +    E  +   L     ++D+  + G + +A      MP+K +   W  ++GA
Sbjct: 414 HYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGA 470



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 170/367 (46%), Gaps = 80/367 (21%)

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA--ADSYTFSCVLK-CLAVVG--- 212
           D   VF +N+L+   +     +++L LF  M+  G A   D YT+   LK C A  G   
Sbjct: 82  DRTTVF-FNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVL 140

Query: 213 -------NSR---------------------RVKDAHKLFDELSDRDVVSWNCMISGYIA 244
                   +R                     R  DA+++F+E+  RDVVSWN MISG+  
Sbjct: 141 GRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAH 200

Query: 245 NGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            G+  + ++VF+E++ L     D  TM ++L           G+A               
Sbjct: 201 AGLFGRAMDVFRELVALQCPKPDAGTMASILPS--------MGKA--------------- 237

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
                     +  D+     VF++M  + ++SW +M+A Y    +   A+ LF  M ++G
Sbjct: 238 ----------RVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDG 287

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           IEPD   + ++L +C     L +GK +H+ IK   M SS+ + NALMDMYA CG + +A 
Sbjct: 288 IEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEAR 347

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLA 472
            VF+ M  +D+VSW ++I           A+DLF  M  Q  EPD +    IL AC+   
Sbjct: 348 DVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAG 407

Query: 473 ALERGRE 479
            L+ G+ 
Sbjct: 408 LLDMGKH 414



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 3/150 (2%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  +       +A+E+    +K  I  D  T  ++L  C ++ +L  GK++H +I
Sbjct: 259 SWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVI 318

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
               +     +L + L+ M+  CG LKE R VF+ +    V  W  ++  Y + G+ +E+
Sbjct: 319 KRRRMC-SSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREA 377

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           + LF+KM   G+  DS  F  +L   +  G
Sbjct: 378 IDLFEKMCGQGLEPDSIAFVAILAACSHAG 407


>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
 gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
          Length = 539

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/531 (42%), Positives = 308/531 (58%), Gaps = 64/531 (12%)

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           + PDV ++ ++L ACA  G    GK VH     +     L+V NAL+DMYAKCG + +A 
Sbjct: 9   MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68

Query: 424 SVFNQMPVKDIVS-----------------------------------WNTMIGA----- 443
            VF+++  KD+VS                                   W+ +I A     
Sbjct: 69  KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128

Query: 444 -----LDLFVAMLQN------------FEPDGV------TMACILPACASLAALERGREI 480
                LD+F  M               F+ DG+      T++C L ACA LAAL  GR+I
Sbjct: 129 LGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQI 188

Query: 481 HGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           H YILR H  SA   VAN ++DMY K G + +AR +FD +  K+ +SWT ++ GYGMHG 
Sbjct: 189 HAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGR 248

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
           G +A+  F++MR+ G++PD V+ + VLYACSHSG++D+G  FFN M  E  + P  EHYA
Sbjct: 249 GKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYA 308

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           CMVDLL R G L+EA   IE M + P + +W +LL GCRIH  V+L E  A+ + EL  +
Sbjct: 309 CMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSE 368

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           N G Y LL+N+YA A +W++V ++R  +   G++K PGCSW++ K     F     +HP 
Sbjct: 369 NDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQ 428

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
           +K+I  +L+ L   +K  GY P+T +AL + D+ EK   L  HSEKLA+A+GIL    G 
Sbjct: 429 SKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGA 488

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            IR+TKNLRVCGDCH    ++S     EI+LRDS+RFHHFK G CSC G+W
Sbjct: 489 PIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 170/344 (49%), Gaps = 24/344 (6%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  +  ++L  CA + +   GK VH I   SG   +D  +G+ LV M+  CG + E  
Sbjct: 10  RPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSG-SFEDLFVGNALVDMYAKCGMVDEAS 68

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           +VF++I    V  WN +++ YS+ G F+++L LF+KM+   I  +  ++S V+   A  G
Sbjct: 69  KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128

Query: 213 NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLATM 270
                 D   +F E+                 +G A   LE+F  M      V  +  T+
Sbjct: 129 LGCETLD---VFREMQ----------------HGEANDALELFSWMFKQDGLVKPNCFTI 169

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMG 329
              L  CA   AL  GR +HA+ L+  F     +  N L+DMY+K GD+D A  VF+ + 
Sbjct: 170 SCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLK 229

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           +++ VSWTS++ GY   G    A+ +F  M R G++PD   +  +L+AC+  G+++ G +
Sbjct: 230 QKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIE 289

Query: 390 VHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
             + + KE  +         ++D+  + G + +A  +   M ++
Sbjct: 290 FFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQME 333



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 78/135 (57%)

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
           +  PD V++  +LPACAS+ A   G+ +HG  +R G   D  V NA+VDMY KCG++  A
Sbjct: 8   DMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEA 67

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +FD I  KD++SW  M+ GY   G   DA+  F  MR+  IE + VS+ +V+ A +  
Sbjct: 68  SKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQR 127

Query: 573 GLVDEGWRFFNMMRY 587
           GL  E    F  M++
Sbjct: 128 GLGCETLDVFREMQH 142


>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
 gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/574 (38%), Positives = 335/574 (58%), Gaps = 15/574 (2%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK---CGDLDGAIRVFEKM 328
           ++LS    C +L   + + AF++K     ++     L++  ++      +D A ++FE +
Sbjct: 28  SLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAI 87

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            +  +V + SM  GY+R      AI LF   +   + PD Y   S+L AC      + GK
Sbjct: 88  PQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGK 147

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
            +H    +  +  + YV   L++MYA C  +  A+ VF+++    +VS+N +I       
Sbjct: 148 QLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSS 207

Query: 443 ----ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
               AL LF  +  +  +P+ VT+  +L +CA L AL+ G+ IH Y+ ++G+     V  
Sbjct: 208 RPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNT 267

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           A++DMY KCG L  A S+F+ +  +D  +W+ MI  Y MHG G D ++ F +M +A ++P
Sbjct: 268 ALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQP 327

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           DE++F+ +LYACSH+GLVDEG+R+F  M     I P ++HY CMVDLL R G L EAY+F
Sbjct: 328 DEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKF 387

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           I+ +P+ P   +W +LL  C  H  ++LA++V   + EL+  + G YV+L+N+ A A KW
Sbjct: 388 IDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKW 447

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
           E+V  LR+ +  +G  K PGCS IE+   V+ F +G   H  +  +   L  L  E+K  
Sbjct: 448 EDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKSV 507

Query: 738 GYFPKTRYAL-INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
           GY P T   +  + ++ EKE+ L  HSEKLA++FG+LN P G TIRV KNLRVCGDCH  
Sbjct: 508 GYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSA 567

Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           AK +S    REI+LRD  RFHHFKDG+CSC  +W
Sbjct: 568 AKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 175/332 (52%), Gaps = 13/332 (3%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           AH+LF+ +   D+V +N M  GY  +    K + +F + LN     D  T  ++L  C  
Sbjct: 80  AHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVV 139

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             A   G+ +H  A+K   ++      TL++MY+ C D+DGA RVF+++ E  VVS+ ++
Sbjct: 140 AKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAI 199

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I GYAR    + A+ LFR +    ++P+   + S+L +CA  G L++GK +H+Y+K+N +
Sbjct: 200 ITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGL 259

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVA 449
              + V+ AL+DMYAKCGS+  A SVF  M V+D  +W+ MI A          + +F  
Sbjct: 260 DKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEE 319

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCG 507
           M +   +PD +T   +L AC+    ++ G R  +     +GI         +VD+  + G
Sbjct: 320 MARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAG 379

Query: 508 VLVLARSLFDMIPAKDL-ISWTIMIAGYGMHG 538
           +L  A    D +P K   I W  +++    HG
Sbjct: 380 LLHEAYKFIDELPIKPTPILWRTLLSSCSSHG 411



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 182/393 (46%), Gaps = 38/393 (9%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLV---FMFVT 144
           S   S  +T    S+L       SL++ K++ +   ++ +  D  +L +KL+       T
Sbjct: 15  SQHSSYYNTTYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQIL-TKLINSCTQNPT 73

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
              +    ++F  I    + ++N +   YS++    +++ LF K  +  +  D YTF  +
Sbjct: 74  TASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSL 133

Query: 205 LK---------------CLAV-----------------VGNSRRVKDAHKLFDELSDRDV 232
           LK               CLA+                       V  A ++FDE+ +  V
Sbjct: 134 LKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCV 193

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           VS+N +I+GY  +    + L +F+++       +  T+++VLS CA  GAL  G+ +H +
Sbjct: 194 VSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEY 253

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
             K    K +  N  L+DMY+KCG LDGAI VFE M  R   +W++MI  YA  G     
Sbjct: 254 VKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDV 313

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSNALMD 411
           + +F  M R  ++PD      +L+AC+  GL++ G +  +   +   +   +     ++D
Sbjct: 314 MSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVD 373

Query: 412 MYAKCGSMADAESVFNQMPVKDI-VSWNTMIGA 443
           +  + G + +A    +++P+K   + W T++ +
Sbjct: 374 LLGRAGLLHEAYKFIDELPIKPTPILWRTLLSS 406


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/503 (42%), Positives = 306/503 (60%), Gaps = 13/503 (2%)

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
           +GY R  +    I ++  M+ + + P+ +    ++ AC  D  +E GK +H ++ +    
Sbjct: 67  SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKD--IVSWNTMIGA----------LDLFV 448
           +  +  N L+ MY    S+  A  VF+ MP +D   VSWN MI A            LF 
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186

Query: 449 AM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            M L+N   D    A +L AC  L ALE+G+ IHGYI + GI  D  +A  ++DMY KCG
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCG 246

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            L  A  +F+ +P K + SW  MI G  MHG G  AI  F +M +  + PD ++F++VL 
Sbjct: 247 CLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLS 306

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           AC+HSGLV+EG  +F  M     ++P +EH+ CMVDLL R G L EA + I  MPV PDA
Sbjct: 307 ACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDA 366

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            + G+L+  CRIH   +L E++ + V ELEP N+G YVLLAN+YA A +WE+V K+R+ +
Sbjct: 367 GVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLM 426

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
           + RG+KK PG S IE +  V+ F+AGG +HP AK+I + L  +   ++  GY P T   L
Sbjct: 427 NDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVL 486

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
            + DE EKE  L  HSEKLA+AFG+L    G+T+R++KNLR+C DCH+ +K +SK   RE
Sbjct: 487 HDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDRE 546

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           I++RD NRFHHF+ G CSC+ +W
Sbjct: 547 IIIRDRNRFHHFRMGGCSCKDYW 569



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 146/295 (49%), Gaps = 14/295 (4%)

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           SGY+   +A   + ++  ML+   + +  T   ++  C    A+  G+ +HA  LK  F 
Sbjct: 67  SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGER--SVVSWTSMIAGYAREGVFDGAIRLFR 357
            +    N L+ MY     L+ A RVF+ M +R  + VSW +MIA Y +      A  LF 
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M  E +  D +   S+L AC   G LE GK +H YI+++ ++    ++  ++DMY KCG
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCG 246

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNF-EPDGVTMACILP 466
            +  A  VFN++P K I SWN MIG          A++LF  M +    PDG+T   +L 
Sbjct: 247 CLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLS 306

Query: 467 ACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
           ACA    +E G+    Y+    G+         +VD+  + G+L  AR L + +P
Sbjct: 307 ACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMP 361



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 175/381 (45%), Gaps = 27/381 (7%)

Query: 82  AMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM 141
           ++++L +S  S    K +   L       ++ + K+ HS I   G+  D+  +G  + F 
Sbjct: 3   SLQLLQASPPSLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKF- 61

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF---------------KESLYLF 186
              C   K G   +    N  +F+++ ++H+      F               +E   + 
Sbjct: 62  ---CAISKSGYLRWQLARNC-IFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIH 117

Query: 187 KKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS--DRDVVSWNCMISGYIA 244
             +   G  AD ++ + ++       N + ++ A ++FD +   DR+ VSWN MI+ Y+ 
Sbjct: 118 AHVLKFGFGADGFSLNNLIHMYV---NFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQ 174

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           +    +   +F  M      +D     ++LS C   GAL  G+ +H +  K+    +   
Sbjct: 175 SNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKL 234

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
             T++DMY KCG L+ A  VF ++ ++ + SW  MI G A  G  + AI LF+ M RE +
Sbjct: 235 ATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMV 294

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAE 423
            PD     ++L ACA  GL+E GK    Y+ E   ++  +     ++D+  + G + +A 
Sbjct: 295 APDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEAR 354

Query: 424 SVFNQMPVK-DIVSWNTMIGA 443
            + N+MPV  D      ++GA
Sbjct: 355 KLINEMPVNPDAGVLGALVGA 375


>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/495 (43%), Positives = 301/495 (60%), Gaps = 16/495 (3%)

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           A+R +  M R  + P+ +    +L ACA    LE+G  VH  + +   +   +V N L+ 
Sbjct: 211 ALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVH 270

Query: 412 MYAKC-----GSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFE 455
           MY  C          A+ VF++ PVKD V+W+ MIG          A+ LF  M +    
Sbjct: 271 MYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVC 330

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
           PD +TM  +L ACA L ALE G+ +  YI R  I     + NA++DM+ KCG +  A  +
Sbjct: 331 PDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKV 390

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           F  +  + ++SWT MI G  MHG G +A+  F++M + G++PD+V+FI VL ACSHSGLV
Sbjct: 391 FREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLV 450

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           D+G  +FN M    +I PK+EHY CMVD+LSR G ++EA  F+  MPV P+  IW S++ 
Sbjct: 451 DKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVT 510

Query: 636 GCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
            C    E+KL E VA+ +   EP +   YVLL+N+YA+  +WE+  K+RE +  +G++K 
Sbjct: 511 ACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKI 570

Query: 696 PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEK 755
           PG + IE+  ++  FVAG  SH   K+I  +++ +  E+KR GY P T   L++ DE +K
Sbjct: 571 PGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPTTSQVLLDIDEEDK 630

Query: 756 EVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNR 815
           E AL  HSEKLA+AF +L+ P G  IR+ KNLRVC DCH   KF+SK   REIV+RD NR
Sbjct: 631 EDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNR 690

Query: 816 FHHFKDGRCSCRGFW 830
           FHHFK+G CSC  FW
Sbjct: 691 FHHFKNGLCSCGDFW 705



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 174/376 (46%), Gaps = 74/376 (19%)

Query: 164 FIWNLLMHEYSKTGNFK-ESLYLFKKMQSLGIAADSYTFSCVLK---------------- 206
           F++N L+  +++T + K  +L  +  M+   ++ + +TF  VLK                
Sbjct: 192 FLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHA 251

Query: 207 ----------------------CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
                                 C    G+S  V  A K+FDE   +D V+W+ MI GY  
Sbjct: 252 SMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPV-SAKKVFDESPVKDSVTWSAMIGGYAR 310

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G + + + +F+EM   G   D  TMV+VLS CA+ GAL  G+ + ++  +    + +  
Sbjct: 311 AGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVEL 370

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            N L+DM++KCGD+D A++VF +M  R++VSWTSMI G A  G    A+ +F  M+ +G+
Sbjct: 371 CNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGV 430

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS------NALMDMYAKCGS 418
           +PD  A   +L AC+  GL++ G   H Y   N M++   +         ++DM ++ G 
Sbjct: 431 DPDDVAFIGVLSACSHSGLVDKG---HYYF--NTMENMFSIVPKIEHYGCMVDMLSRAGR 485

Query: 419 MADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGR 478
           + +A      MPV                       EP+ V    I+ AC +   L+ G 
Sbjct: 486 VNEALEFVRAMPV-----------------------EPNQVIWRSIVTACHARGELKLGE 522

Query: 479 EIHGYILRHGISADRN 494
            +   ++R   S + N
Sbjct: 523 SVAKELIRREPSHESN 538



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 157/384 (40%), Gaps = 76/384 (19%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC-GDLKEG----R 152
           T+  +L+ CA +  LE G  VH+ + + G   D  V  + LV M+  C  D   G    +
Sbjct: 229 TFPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNT-LVHMYCCCCQDGSSGPVSAK 287

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           +VF++        W+ ++  Y++ GN   ++ LF++MQ  G+  D  T   VL   A +G
Sbjct: 288 KVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLG 347

Query: 213 ---------------NSRR-----------------VKDAHKLFDELSDRDVVSWNCMIS 240
                          N  R                 V  A K+F E+  R +VSW  MI 
Sbjct: 348 ALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIV 407

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G   +G   + + VF EM+  G + D    + VLS C++ G +  G              
Sbjct: 408 GLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHY------------ 455

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
              + NT+ +M+S    ++                +  M+   +R G  + A+   R M 
Sbjct: 456 ---YFNTMENMFSIVPKIE---------------HYGCMVDMLSRAGRVNEALEFVRAM- 496

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDV-HDYIKENDMQSSLYVSNALMDMYAKCGSM 419
              +EP+     SI+ AC   G L++G+ V  + I+      S YV   L ++YAK    
Sbjct: 497 --PVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYV--LLSNIYAKLLRW 552

Query: 420 ADAESVFNQMPVKDI--VSWNTMI 441
                V   M VK +  +  +TMI
Sbjct: 553 EKKTKVREMMDVKGMRKIPGSTMI 576



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 125/288 (43%), Gaps = 17/288 (5%)

Query: 50  PISAS--ISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQL 105
           P+SA     ++ V  +  ++A IG +   GN  +A+ +    + + +  D  T  S+L  
Sbjct: 283 PVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSA 342

Query: 106 CADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI 165
           CADL +LE GK + S I E   ++    L + L+ MF  CGD+    +VF ++    +  
Sbjct: 343 CADLGALELGKWLESYI-ERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVS 401

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
           W  ++   +  G   E++ +F +M   G+  D   F   +  L+   +S  V   H  F+
Sbjct: 402 WTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAF---IGVLSACSHSGLVDKGHYYFN 458

Query: 226 ELSD-----RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
            + +       +  + CM+      G   + LE  + M      V   ++VT    C   
Sbjct: 459 TMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVT---ACHAR 515

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           G L  G +V    ++   S E ++   L ++Y+K    +   +V E M
Sbjct: 516 GELKLGESVAKELIRREPSHESNY-VLLSNIYAKLLRWEKKTKVREMM 562


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/719 (34%), Positives = 376/719 (52%), Gaps = 46/719 (6%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
           TK+YNA I R    G     +    S  S  +  D  T+ S+++ C  L     G   H 
Sbjct: 13  TKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQ 72

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            +   G    D  + + L+  +   G  +  R+VF+ +D+  V  W  ++  Y++ G   
Sbjct: 73  RVIVDGYS-SDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHD 131

Query: 181 ESLYLFKKMQSLGIAADSYT-------------FSCVLKCLAVVG--------NSR---- 215
            +  ++  M+  GI   S T               C+  C+   G        NS     
Sbjct: 132 VAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVY 191

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
               RV+DA  LF+ +  RDV+SWN ++SGY   G   + L++   M   G   D  T  
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +++S  A    L  G+ VH   L+A   ++     +L+ MY KCG+++ A R+FE M  +
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
            V+SWT+MI+G  +    D A+ +FR M++  + P    I S+L ACA  G   +G  VH
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
            YI    ++  +   N+L+ MYAKCG +  + SVF++M  +DIVSWN ++          
Sbjct: 372 GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLC 431

Query: 443 -ALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            AL LF  M +  + PD +T+  +L ACAS+ AL +G+ IH ++ +  +     +  A+V
Sbjct: 432 KALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALV 491

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           DMY KCG L  A+  FD +P +DL+SW+ +IAGYG HG G  A+  ++D    GI+P+ V
Sbjct: 492 DMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHV 551

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
            ++S+L ACSH+GLVD+G  FF+ M  +  IEP+LEH AC+VDLLSR G + EAY F + 
Sbjct: 552 IYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKR 611

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
           M   P   + G LL  CR    V+L + VA  +  L+P N G YV LA+ YA  ++W+ V
Sbjct: 612 MFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGV 671

Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
            ++  ++    LKK PG S+IE+ G +  F    SSHP   + E ++ R+ L  KR  +
Sbjct: 672 GEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHP---QFEEIIDRVLLLNKRRRF 727


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/684 (33%), Positives = 368/684 (53%), Gaps = 63/684 (9%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI-ANGVAEKGLEVFKEMLNLGFNVD 266
           L +   S  +  AHKLFDE++ ++  +W  +ISG+  A G +E    +F+EM   G   +
Sbjct: 74  LTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPN 133

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             T+ +VL  C+    + FG+ +HA+ L+     ++   N++LD+Y KC + + A   FE
Sbjct: 134 QYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFE 193

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRG---------------------------- 358
            M E+ VVSW  MI  Y REG  + ++ +FR                             
Sbjct: 194 LMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQ 253

Query: 359 ---MVREGIE--PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
              MV  G E  P  ++I  IL   +   L+E+G+ +H  +    + S  Y+ ++L++MY
Sbjct: 254 LYCMVAHGTEFSPVTFSIALIL--VSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMY 311

Query: 414 AKCGSMADAESVFNQMPVK----------------DIVSWNTMIG----------ALDLF 447
            KCG M  A ++   +P+                  +VSW++M+            +  F
Sbjct: 312 GKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTF 371

Query: 448 VAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
            +M+ +    D  T+A I+ ACA+   LE G++IH YI + G+  D  V ++++DMY K 
Sbjct: 372 RSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKS 431

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G L  A  +F+ I   +++ WT MI+G  +HG G +AI+ F  M   GI P+EV+F+ VL
Sbjct: 432 GSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVL 491

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
            ACSH GL++EG R+F MM+   +I P++EHY  MV+L  R G+L EA  FI    ++  
Sbjct: 492 NACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHF 551

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
            ++W S L  CR+H    + + V+E + +  P +   Y+LL+N+ +   +W+E   +R  
Sbjct: 552 TSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSL 611

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
           + +RG+KK PG SW+++K +++ F  G  SHP  K+I S L  L   +K  GY    +  
Sbjct: 612 MYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLV 671

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
           + + +E + EV +  HSEKLA+ F I+N      IR+ KNLR+C DCH   K+ S+   R
Sbjct: 672 MQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLLER 731

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
           EI++RD++RFHHFK   CSC  +W
Sbjct: 732 EIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 142/576 (24%), Positives = 256/576 (44%), Gaps = 107/576 (18%)

Query: 96  TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK--LVFMFVTCGDLKEGRR 153
           ++  CS L     + S    + +H    + G +    +L S   L+ ++V   +L    +
Sbjct: 32  SRQPCSFLHSTTSIGSPPSLRALHGHYFKKGSL---QILNSANYLLTLYVKSSNLDHAHK 88

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLY-LFKKMQSLGIAADSYTFSCVLKCLA--- 209
           +F++I +     W +L+  +++     E ++ LF++MQ+ G   + YT S VLKC +   
Sbjct: 89  LFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSREN 148

Query: 210 ---------------------VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMIS 240
                                V+ NS        +  + A   F+ + ++DVVSWN MI 
Sbjct: 149 NIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIG 208

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG------------------- 281
            Y+  G  EK LE+F+       N D+ +  T++ G   CG                   
Sbjct: 209 AYLREGDVEKSLEMFRNFP----NKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEF 264

Query: 282 -------ALMF---------GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
                  AL+          GR +H   L    + +    ++L++MY KCG +D A  + 
Sbjct: 265 SPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTIL 324

Query: 326 E----------------KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           +                K  +  +VSW+SM++GY   G ++  ++ FR MV E I  D+ 
Sbjct: 325 KDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIR 384

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            + +I+ ACA  G+LE GK +H YI++  ++   YV ++L+DMY+K GS+ DA  +F Q+
Sbjct: 385 TVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQI 444

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG- 477
              ++V W +MI           A+ LF  ML     P+ VT   +L AC+ +  +E G 
Sbjct: 445 KEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGC 504

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS-LFDMIPAKDLISWTIMIAGYGM 536
           R        + I+ +     ++V++Y + G L+ A++ +F+   +     W   ++   +
Sbjct: 505 RYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRL 564

Query: 537 H-GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           H  F      +   ++ A  +PD    +S + + +H
Sbjct: 565 HKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNH 600



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 224/461 (48%), Gaps = 65/461 (14%)

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
            ++N  F+       + L    + G+    RA+H    K    + ++  N LL +Y K  
Sbjct: 22  HIVNFPFHSRSRQPCSFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSS 81

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYARE-GVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           +LD A ++F+++  ++  +WT +I+G+AR  G  +    LFR M  +G  P+ Y ++S+L
Sbjct: 82  NLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVL 141

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
             C+ +  ++ GK +H +I  N +   + + N+++D+Y KC     AES F  M  KD+V
Sbjct: 142 KCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVV 201

Query: 436 SWNTMIGA------LDLFVAMLQNF----------------------------------- 454
           SWN MIGA      ++  + M +NF                                   
Sbjct: 202 SWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHG 261

Query: 455 -EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
            E   VT +  L   +SL+ +E GR++HG +L  G+++D  + +++V+MY KCG +  A 
Sbjct: 262 TEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKAS 321

Query: 514 SLFDMIPAKDL----------------ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           ++   +P   L                +SW+ M++GY  +G   D + TF  M    I  
Sbjct: 322 TILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVV 381

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY--ACMVDLLSRTGNLSEAY 615
           D  +  +++ AC+++G+++ G +   +  Y   I  +++ Y  + ++D+ S++G+L +A 
Sbjct: 382 DIRTVATIISACANAGILEFGKQ---IHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDAL 438

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
              E +   P+  +W S++ GC +H + K A  + E +  L
Sbjct: 439 MIFEQIK-EPNVVLWTSMISGCALHGQGKEAISLFEGMLNL 478



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 3/138 (2%)

Query: 77  GNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G  E  M+   S   E   +D +T  +I+  CA+   LE GK++H+ I + G+ ID   +
Sbjct: 362 GKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRID-AYV 420

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
           GS L+ M+   G L +   +F +I    V +W  ++   +  G  KE++ LF+ M +LGI
Sbjct: 421 GSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGI 480

Query: 195 AADSYTFSCVLKCLAVVG 212
             +  TF  VL   + VG
Sbjct: 481 IPNEVTFVGVLNACSHVG 498


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/620 (35%), Positives = 354/620 (57%), Gaps = 25/620 (4%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           R+VVSW  ++SG   NG     L  F EM   G   +  T   V    A+    + G+ +
Sbjct: 71  RNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQI 130

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           HA A+K     ++    +  DMY K    D A ++F+++ ER++ +W + I+    +G  
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRP 190

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             AI  F    R G +P+       L+AC+   LL++G  +H  +  +   + + V N L
Sbjct: 191 KEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGL 250

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVT--------- 460
           +D Y KC  +  +E +F +M +K+ VSW +++ A       +QN E +  +         
Sbjct: 251 IDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAY------VQNHEDEKASVLYLRSRKE 304

Query: 461 --------MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
                   ++ +L ACA +A LE GR IH + ++  +  +  V +A+VDMY KCG +  +
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDS 364

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM--RQAGIEPDEVSFISVLYACS 570
              FD +P K+L++   +I GY   G    A+A F DM  R  G  P+ ++F+S+L ACS
Sbjct: 365 EQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACS 424

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
            +G V+ G + F+ M+    IEP  EHY+C+VD+L R G + +A+ FI+ MP+ P  ++W
Sbjct: 425 RAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVW 484

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
           G+L   CR+H +  L    AE++F+L+P ++G +VLL+N +A A +W E   +RE++   
Sbjct: 485 GALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGV 544

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           G+KK  G SWI +K +V+ F A   SH   K+I+++L +LR +M+  GY P  + +L + 
Sbjct: 545 GIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDL 604

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           +E EK   +  HSEKLA+AFG++ LP    IR+TKNLR+CGDCH   KF+S + +REI++
Sbjct: 605 EEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIV 664

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RD+NRFH FKDG CSC+ +W
Sbjct: 665 RDNNRFHRFKDGICSCKDYW 684



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 232/484 (47%), Gaps = 47/484 (9%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L+      S+  G+ VH+ I ++        L + L+ M+      +  R V       
Sbjct: 12  LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-----VVGN--- 213
            V  W  L+   ++ G+F  +L+ F +M+  G+A + +TF CV K +A     V G    
Sbjct: 72  NVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIH 131

Query: 214 ------------------------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                                   +R   DA KLFDE+ +R++ +WN  IS  + +G  +
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPK 191

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + +E F E   +G   +  T    L+ C++   L  G  +H    ++ F  ++S  N L+
Sbjct: 192 EAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLI 251

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           D Y KC  +  +  +F +MG ++ VSW S++A Y +    + A  L+    +E +E   +
Sbjct: 252 DFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDF 311

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            I+S+L ACA    LE+G+ +H +  +  ++ +++V +AL+DMY KCG + D+E  F++M
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEM 371

Query: 430 PVKDIVSWNTMIGA------LDLFVAMLQNFEPDG-------VTMACILPACASLAALER 476
           P K++V+ N++IG       +D+ +A+ ++  P G       +T   +L AC+   A+E 
Sbjct: 372 PEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVEN 431

Query: 477 GREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGY 534
           G +I   +   +GI       + IVDM  + G++  A      +P K  IS W  +    
Sbjct: 432 GMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNAC 491

Query: 535 GMHG 538
            MHG
Sbjct: 492 RMHG 495



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/315 (19%), Positives = 132/315 (41%), Gaps = 41/315 (13%)

Query: 64  KNYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           + +NA I      G  ++A+E      +   + ++ T+C  L  C+D   L+ G ++H +
Sbjct: 175 ETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGL 234

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +  SG   D  V    L+  +  C  ++    +F ++       W  L+  Y +    ++
Sbjct: 235 VFRSGFDTDVSVYNG-LIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEK 293

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLA-------------------------------- 209
           +  L+ + +   +    +  S VL   A                                
Sbjct: 294 ASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVD 353

Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDL 267
           + G    ++D+ + FDE+ ++++V+ N +I GY   G  +  L +F++M     G   + 
Sbjct: 354 MYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNY 413

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN--TLLDMYSKCGDLDGAIRVF 325
            T V++LS C+  GA+  G  +   ++K+ +  E    +   ++DM  + G ++ A    
Sbjct: 414 MTFVSLLSACSRAGAVENGMKIFD-SMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFI 472

Query: 326 EKMGERSVVS-WTSM 339
           +KM  +  +S W ++
Sbjct: 473 KKMPIKPTISVWGAL 487



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 1/112 (0%)

Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRN-VANAIVDMYVKCGVLVLARSLFDM 518
            +  +L    S +++  GR +H  I++   S     +AN +++MY K      AR +  +
Sbjct: 8   ALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            PA++++SWT +++G   +G    A+  F +MR+ G+ P++ +F  V  A +
Sbjct: 68  TPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVA 119


>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 259/825 (31%), Positives = 417/825 (50%), Gaps = 126/825 (15%)

Query: 64   KNYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            K+Y   I   C+ G+L++++ +L     E  +I  + Y  +LQ C   ++L  G+++H+ 
Sbjct: 1140 KSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHAR 1199

Query: 122  ICESG-IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            I ++G     +  + +KLV  +  C   +   R+F+++    VF W  ++    + G  +
Sbjct: 1200 ILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSE 1259

Query: 181  ESLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRRV-------------------- 217
            ++L  F +MQ  G+  D++    VLK    L ++G  + V                    
Sbjct: 1260 DALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLV 1319

Query: 218  ---------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                     +DA K+FD + +++VV+WN MI GY+ NG+ ++ ++VF +M   G      
Sbjct: 1320 DMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRV 1379

Query: 269  TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            T+ + LS  AN  AL+ G+  HA A+      +    +++++ YSK G ++ A  VF +M
Sbjct: 1380 TVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRM 1439

Query: 329  GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             E+ VV+W  +I+ Y +      A+ +   M  E +  D   ++SIL A A    +++GK
Sbjct: 1440 LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGK 1499

Query: 389  DVHDYIKENDMQSSLYVSNA-------------------------------LMDMYAKCG 417
            + H Y    +++S + V+N+                               L+  YA+ G
Sbjct: 1500 EGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVG 1559

Query: 418  SMADAESVFNQMPV----KDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVT-- 460
               +A  +F QM       +++SWN++I           A D+F  M    F+P+ +T  
Sbjct: 1560 LSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWT 1619

Query: 461  ---------------------------------MACILPACASLAALERGREIHGYILRH 487
                                             +  +L AC  + +L  GR IHG+I RH
Sbjct: 1620 TLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRH 1679

Query: 488  GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
                   VA ++VDMY KCG +  A+ +F M+ +K+L  +  MI+ Y +HG   +A+A F
Sbjct: 1680 EFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALF 1739

Query: 548  NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
              +++ GIEPD ++F S+L ACSH+GLV+EG   F  M  + N+ P +EHY C+V LLSR
Sbjct: 1740 KHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSR 1799

Query: 608  TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
             GNL EA R I  MP  PDA I GSLL  CR HHE++L E +++H+F+LEP N+G YV L
Sbjct: 1800 CGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVAL 1859

Query: 668  ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLL 727
            +N YA A +W EV  +R+ +  RGL+KNPGCSWI+  GK+N+FVAG  SHP  ++I ++L
Sbjct: 1860 SNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAML 1919

Query: 728  KRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
              L  EM+  GY P              E  LC  ++KL   + +
Sbjct: 1920 AMLLSEMRFMGYVPIA----------SNEENLCSRAQKLLCKYAV 1954


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/664 (37%), Positives = 377/664 (56%), Gaps = 47/664 (7%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           ++D  T+  +L+LC+D   +  G +VH ++ + G   D  V G+ L+ ++  CG L + R
Sbjct: 7   QLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYV-GNTLLMLYGNCGFLNDAR 65

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKES--LYLFKKMQS------------LGIAA-- 196
           R+F+++    V  WN ++   S  G++ E+   Y +  ++S            L I+A  
Sbjct: 66  RLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAAL 125

Query: 197 ---------DSYTF-----SCVLKCLAVV---GNSRRVKDAHKLFDELSDRDVVSWNCMI 239
                      Y+      S V  C A+V   G    VK   ++F+E  +++ VSWN +I
Sbjct: 126 EDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSII 185

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
           +G    G     L  F+ M++ G   +  T+ ++L           G+ +H F+++    
Sbjct: 186 NGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTE 245

Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
            +I   N+L+DMY+K G    A  +F  +  R++VSW +MIA YA   +   AIR    M
Sbjct: 246 TDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQM 305

Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
              G  P+    T++L ACA  G L  GK++H       + S L+VSN+L+DMYAKCG +
Sbjct: 306 QETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCL 365

Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPAC 468
             A +VFN    KD VS+N +I           +L+LF  M L   +PD V+   ++ AC
Sbjct: 366 HSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISAC 424

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A+LAAL++G+E+HG  LR+ + +   V+N+++D Y KCG + +A  LF+ I  KD+ SW 
Sbjct: 425 ANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWN 484

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            MI GYGM G    AI+ F  MR   ++ D VS+I+VL ACSH GLV+ GW++F+ M  +
Sbjct: 485 TMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ 544

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             +EP   HY CMVDLL R G + EA + I+ +P+APDA IWG+LL  CRI+  V+L  +
Sbjct: 545 -RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRR 603

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
            AEH+FEL+P + GYY+LL+N+YAE  +W+E  K+RE +  RG KKNPGCSW++I  +V+
Sbjct: 604 AAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVH 663

Query: 709 IFVA 712
            FVA
Sbjct: 664 AFVA 667



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 190/369 (51%), Gaps = 13/369 (3%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           M+  G  +D  T   VL  C++   +  G  VH    K  F  ++   NTLL +Y  CG 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV-REGIEPDVYAITSILH 376
           L+ A R+F++M ER VVSW ++I   +  G +  A   +  M+ R  I+P++ ++ S+L 
Sbjct: 61  LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
             A     E+ + +H Y  +  + S +   NAL+D Y KCGS+     VFN+   K+ VS
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180

Query: 437 WNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYIL 485
           WN++I           AL+ F  M+    +P+ VT++ ILP    L   + G+EIHG+ +
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 240

Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
           R G   D  +AN+++DMY K G    A ++F  +  ++++SW  MIA Y ++    +AI 
Sbjct: 241 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR 300

Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLL 605
               M++ G  P+ V+F +VL AC+  G +  G +  + M     +   L     ++D+ 
Sbjct: 301 FVIQMQETGECPNAVTFTNVLPACARLGFLGPG-KEIHAMGVRIGLTSDLFVSNSLIDMY 359

Query: 606 SRTGNLSEA 614
           ++ G L  A
Sbjct: 360 AKCGCLHSA 368


>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
          Length = 485

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/481 (43%), Positives = 302/481 (62%), Gaps = 12/481 (2%)

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           + + PD   + S++ ACA  G LE GK +H Y KE  +  +L V+NA++DMY KC  +  
Sbjct: 5   DNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIES 64

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACAS 470
           A+ VFN++  KD++SW +M+           +L LF  M L   EPD +T+  +L ACA 
Sbjct: 65  AQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQ 124

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
             AL++G+ IH  I +  I+ D  +  A+VDMY KCG + LA  +F  +  +++ +W  M
Sbjct: 125 TGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAM 184

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I G  MHG G DAI+ F+ M    + PD+V+FI++L ACSH+GLVDEG   F  M+ +  
Sbjct: 185 IGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQ 244

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           IEP++EHY C+VDLL R   + +A  FIE MP+  ++ +W +LL  CR      LAEK+ 
Sbjct: 245 IEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIX 304

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
             V ELEPD+ G YV+L+N+YA   +W+   KLR+++  +G++K PGCSWIE+ G ++ F
Sbjct: 305 RRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQF 364

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKRE-GYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           VAG  SH   ++I ++++ +   +  + G+ P T   L + +E EKE +L  HSEKLA+A
Sbjct: 365 VAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIA 424

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
            G+++ P+G  IR+ KNLRVC DCH   K  SK   REIV RD +RFHHFK+G CSC  F
Sbjct: 425 LGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDF 484

Query: 830 W 830
           W
Sbjct: 485 W 485



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 129/223 (57%), Gaps = 11/223 (4%)

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  TMV+++  CA  G L  G+ +H+++ +    + +S NN +LDMY KC D++ A  VF
Sbjct: 10  DEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEVF 69

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
            ++ E+ V+SWTSM++G A+ G F  ++ LFR M    IEPD   +  +L ACA  G L+
Sbjct: 70  NRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALD 129

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD 445
            GK +H  I + ++   L +  AL+DMYAKCGS+  A  VF +M V+++ +WN MIG L 
Sbjct: 130 QGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLA 189

Query: 446 LF------VAMLQNFE-----PDGVTMACILPACASLAALERG 477
           +       +++    E     PD VT   +L AC+    ++ G
Sbjct: 190 MHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEG 232



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 128/221 (57%), Gaps = 8/221 (3%)

Query: 451 LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
           L N  PD VTM  ++PACA L  LERG+ +H Y    G+  + +V NAI+DMY KC  + 
Sbjct: 4   LDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIE 63

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            A+ +F+ I  KD++SWT M++G    G+  +++A F  M+   IEPDE++ + VL AC+
Sbjct: 64  SAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACA 123

Query: 571 HSGLVDEGWRFFNMM--RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
            +G +D+G ++ +++  ++E N +  LE    +VD+ ++ G++  A +    M V  +  
Sbjct: 124 QTGALDQG-KYIHLLIDKFEINCDLVLE--TALVDMYAKCGSIDLALQVFRRMRVR-NVF 179

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVF--ELEPDNTGYYVLL 667
            W +++ G  +H   + A  + + +   +L PD+  +  LL
Sbjct: 180 TWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALL 220



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 141/272 (51%), Gaps = 5/272 (1%)

Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVV 233
           ++ GN +    L    + LG+  +    + +L       +   ++ A ++F+ + ++DV+
Sbjct: 22  AQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDD---IESAQEVFNRIREKDVL 78

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           SW  M+SG   +G  ++ L +F++M       D  T+V VLS CA  GAL  G+ +H   
Sbjct: 79  SWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLI 138

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
            K   + ++     L+DMY+KCG +D A++VF +M  R+V +W +MI G A  G  + AI
Sbjct: 139 DKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAI 198

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDM 412
            LF  M  + + PD     ++L AC+  GL++ G  +   +K    ++  +     ++D+
Sbjct: 199 SLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDL 258

Query: 413 YAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
             +   + DA +    MP+K + V W T++GA
Sbjct: 259 LCRARKVDDALAFIENMPIKANSVLWATLLGA 290



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 44/324 (13%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEG 151
           + D  T  S++  CA L +LE GK +HS   E G+  D+ + + + ++ M+  C D++  
Sbjct: 8   RPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGL--DENLSVNNAILDMYCKCDDIESA 65

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
           + VFN+I    V  W  ++   +K+G F+ESL LF+KMQ   I  D  T   VL   A  
Sbjct: 66  QEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQT 125

Query: 212 GNSRRVKDAHKLFDE--------------------------------LSDRDVVSWNCMI 239
           G   + K  H L D+                                +  R+V +WN MI
Sbjct: 126 GALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMI 185

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS 299
            G   +G  E  + +F +M       D  T + +L  C++ G +  G A+   A+K  F 
Sbjct: 186 GGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMKNKFQ 244

Query: 300 KEISFNN--TLLDMYSKCGDLDGAIRVFEKMGERS-VVSWTSMIAGYAREGVFDGAIRLF 356
            E    +   ++D+  +   +D A+   E M  ++  V W +++      G FD A ++ 
Sbjct: 245 IEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIX 304

Query: 357 RGMVREGIEPDV---YAITSILHA 377
           R ++   +EPD    Y + S L+A
Sbjct: 305 RRVIE--LEPDSCGRYVMLSNLYA 326



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 5/138 (3%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           A+ G F E   L + M++     K + D  T   +L  CA   +L+ GK +H +I +  I
Sbjct: 88  AKSGYFQESLALFRKMQL----HKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEI 143

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              D VL + LV M+  CG +    +VF ++    VF WN ++   +  G+ ++++ LF 
Sbjct: 144 NC-DLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFD 202

Query: 188 KMQSLGIAADSYTFSCVL 205
           +M+   +  D  TF  +L
Sbjct: 203 QMEXDKLMPDDVTFIALL 220


>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
 gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/480 (43%), Positives = 301/480 (62%), Gaps = 15/480 (3%)

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC----GSMAD 421
           P+ +    +L ACA  G L +GK VH  + +      + V N L+ MY  C    G +  
Sbjct: 8   PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67

Query: 422 AESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACAS 470
           A  VF++M   D VSW+ MIG          A++LF  M ++   PD +TM  +L AC  
Sbjct: 68  ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           L ALE G+ +  Y+ +  +  +  ++NA++DM+ KCG +  A +LF  +  ++++SWT +
Sbjct: 128 LGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSV 187

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I G  MHG G +A+A F +M ++G+ PD+V FI +L ACSHSGLVD+G R+F+ MR + +
Sbjct: 188 IGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFS 247

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           I PK+EHY CMVD+L R G + EA +F++ MP+ P+  +W +L+  CR H E+KL EK+ 
Sbjct: 248 IVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKIT 307

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
             +   EP +   YVLL+N+YA+   WE+  ++RE +  +G+KK PG + IE+  ++  F
Sbjct: 308 RQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEF 367

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
           VAG  SH  +K+I  ++  +  EMKR GY P T   L++ D+ +KE  L  HSEKLA+AF
Sbjct: 368 VAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIAF 427

Query: 771 GILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +LN P G  IR+ KNLRVC DCH  +KF+SK   REIV+RD NRFHHFK+G CSCR FW
Sbjct: 428 ALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGLCSCRDFW 487



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 127/226 (56%), Gaps = 2/226 (0%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A K+FDE+   D VSW+ MI GY+  G +   + +F+EM   G   D  TMV+VLS C  
Sbjct: 68  ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
            GAL  G+ V ++  K    K +  +N L+DM++KCGD+D A  +F  M ER++VSWTS+
Sbjct: 128 LGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSV 187

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-D 398
           I G A  G    A+ +F  MVR G+ PD      +L AC+  GL++ GK   D ++++  
Sbjct: 188 IGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFS 247

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
           +   +     ++DM  + G + +A     +MP+  + V W T+I A
Sbjct: 248 IVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINA 293



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 150/284 (52%), Gaps = 19/284 (6%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC----GDLDGAIRVFEKM 328
           VL  CA  G L  G++VH   +K  F  E++  NTL+ MY  C    G ++ A +VF++M
Sbjct: 16  VLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFARKVFDEM 75

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            +   VSW++MI GY R G    AI LFR M  +G+ PD   + S+L AC   G LE+GK
Sbjct: 76  YKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGK 135

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL-- 446
            V  Y+++  +Q ++ +SNAL+DM+AKCG +  A ++F  M  ++IVSW ++IG L +  
Sbjct: 136 WVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHG 195

Query: 447 --------FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                   F  M+++   PD V    +L AC+    +++G+      +R   S    + +
Sbjct: 196 RGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDS-MRKDFSIVPKIEH 254

Query: 498 --AIVDMYVKCGVLVLARSLFDMIPA-KDLISWTIMIAGYGMHG 538
              +VDM  + G++  A      +P   + + W  +I     HG
Sbjct: 255 YGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHG 298



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 149/333 (44%), Gaps = 43/333 (12%)

Query: 90  EKSKIDTK-TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC--- 145
           E+ K+  K TY  +L+ CA + +L  GK VH  + + G   D+  + + LV M+  C   
Sbjct: 3   ERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFG-DEVNVQNTLVHMYCCCRGG 61

Query: 146 -GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
            G ++  R+VF+++       W+ ++  Y + G   +++ LF++MQ  G+  D  T   V
Sbjct: 62  EGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSV 121

Query: 205 LKCLAVVG------------NSRRVK--------------------DAHKLFDELSDRDV 232
           L     +G               RV+                     A  LF  + +R++
Sbjct: 122 LSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNI 181

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           VSW  +I G   +G   + + VF+EM+  G   D    + +LS C++ G +  G+  +  
Sbjct: 182 VSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKR-YFD 240

Query: 293 ALKACFS--KEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVF 349
           +++  FS   +I     ++DM  + G +  A++  ++M  + + V W ++I      G  
Sbjct: 241 SMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGEL 300

Query: 350 DGAIRLFRGMVR-EGIEPDVYAITSILHACACD 381
               ++ R ++R E +    Y + S ++A   D
Sbjct: 301 KLGEKITRQLIRNEPMHESNYVLLSNIYAKMSD 333


>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 632

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/566 (38%), Positives = 331/566 (58%), Gaps = 50/566 (8%)

Query: 313 SKCGDLDGAIRVFEK-MGERSVVSWTSMIAGYAREGVFDGAIRLFRG--MVREGIEPDVY 369
           S  G+L  ++ +F   +   ++ ++ +++  +++   +   I  F    ++     PD Y
Sbjct: 69  SSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEY 128

Query: 370 AITSILHACACDGLLEI--GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
             TS+L ACA  GL ++  G+ VH ++ +   +S+L+V N+L+D+Y K G    A+ +F+
Sbjct: 129 TFTSVLKACA--GLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFD 186

Query: 428 QMPVKDIVSWNTMIG-----------------------------------------ALDL 446
           +M V+D+VSWNT+I                                          A++L
Sbjct: 187 EMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIEL 246

Query: 447 FVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           F  M       P+ VT+  +L ACA L AL+ G+ IH +I R+ I     + NA+ DMY 
Sbjct: 247 FRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYA 306

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG ++ A+ +F  +  +D+ISW+I+I G  M+G+  +A   F +M + G+EP+++SF+ 
Sbjct: 307 KCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMG 366

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           +L AC+H+GLVD+G  +F+MM     I PK+EHY C+VDLLSR G L +A   I  MP+ 
Sbjct: 367 LLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQ 426

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           P+  +WG+LL GCRI+ + +  E+V   + EL+ +++G  V LANVYA   + ++    R
Sbjct: 427 PNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCR 486

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
            ++      K PGCSWIEI   V  F  G SSHP + +I S+++ L+ +MK  GY PKT 
Sbjct: 487 LRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTD 546

Query: 745 YALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTA 804
             + N DE EKE AL  HSEKLA+AFG++N   G TIR+ KNLRVC DCH+  K +SK  
Sbjct: 547 LVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIV 606

Query: 805 RREIVLRDSNRFHHFKDGRCSCRGFW 830
            REIV+RD +RFHHFKDG+CSC  +W
Sbjct: 607 EREIVVRDRSRFHHFKDGKCSCNDYW 632



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 175/354 (49%), Gaps = 47/354 (13%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL--GFNVDLATMVTVLSGCANCGALM 284
           LS  ++ ++N ++  +  +      +  F   L L    N D  T  +VL  CA    ++
Sbjct: 85  LSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVL 144

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
            G+ VH F  K      +   N+L+D+Y K G    A ++F++M  R VVSW ++I+GY 
Sbjct: 145 EGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYC 204

Query: 345 REG-------VFDG------------------------AIRLFRGMVRE-GIEPDVYAIT 372
             G       VFDG                        AI LFR M  E G+ P+   + 
Sbjct: 205 FSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLV 264

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           S+L ACA  G L++GK +H +I+ N ++  L++ NAL DMYAKCG + +A+ VF++M  +
Sbjct: 265 SVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHER 324

Query: 433 DIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIH 481
           D++SW+ +I           A + F  M+++  EP+ ++   +L AC     +++G E  
Sbjct: 325 DVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYF 384

Query: 482 GYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
             + + +GI+        +VD+  + G L  A SL + +P + ++I W  ++ G
Sbjct: 385 DMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 438



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 174/360 (48%), Gaps = 50/360 (13%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSII----CESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           D  T+ S+L+ CA L  + +G+KVH  +    CES + + +      LV ++   G    
Sbjct: 126 DEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNS-----LVDLYFKVGCNCI 180

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
            +++F+++    V  WN L+  Y  +G                                 
Sbjct: 181 AQKLFDEMVVRDVVSWNTLISGYCFSG--------------------------------- 207

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLAT 269
                 V  A  +FD + ++++VSW+ MISGY  N      +E+F++M + G    +  T
Sbjct: 208 -----MVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVT 262

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +V+VLS CA+ GAL  G+ +H F  +      +   N L DMY+KCG +  A  VF +M 
Sbjct: 263 LVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMH 322

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           ER V+SW+ +I G A  G  + A   F  M+ +G+EP+  +   +L AC   GL++ G +
Sbjct: 323 ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLE 382

Query: 390 VHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLF 447
             D + +   +   +     ++D+ ++ G +  AES+ N MP++ +++ W  ++G   ++
Sbjct: 383 YFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIY 442


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/623 (35%), Positives = 351/623 (56%), Gaps = 12/623 (1%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF-NVDLATMVTVLSGCA 278
           A  LFD +  R+VVSW  +++GY  NG+  + L +FK M+++ +   +     T++S C+
Sbjct: 81  ARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCS 140

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
           + G ++ G   H +ALK+         N L+ MYS+  D+ GA+ V+ ++    V S+  
Sbjct: 141 DSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNI 200

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +I G    G    A+ +   MV E I  D     +    C+    L +G  VH  +    
Sbjct: 201 IINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTG 260

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFV 448
            +   +VS+A++DMY KCG++ +A  VFN++  K++VSW  ++ A          L+ F 
Sbjct: 261 AEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFP 320

Query: 449 AM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            M +    P+  T A +L +CA ++AL  G+ +H  I + G      V NA+++MY K G
Sbjct: 321 EMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSG 380

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            +  A  +F  +  +D I+W+ MI G   HG G +A+  F +M  A   P  V+F+ VL 
Sbjct: 381 SIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLS 440

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           AC+H G V EG+ + N +  +  IEP +EHY C+V LL + G L EA  F++  PV  D 
Sbjct: 441 ACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDV 500

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
             W +LL  C +H    L +KVAE V +++P + G Y+LL+N+YA+A++W+ V K+R+ +
Sbjct: 501 VAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLM 560

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
             R +KK PG SWIEI+  +++FV+ G +HP + +I   ++ L   ++  GY P      
Sbjct: 561 RERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVF 620

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
            + ++ +K   +  HSEKLA+A+G++  P+G  IRV KNLR+C DCH   K +SK   R 
Sbjct: 621 HDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRM 680

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           I++RD+NRFH F DG CSC  +W
Sbjct: 681 IIVRDANRFHCFGDGGCSCADYW 703



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 231/484 (47%), Gaps = 47/484 (9%)

Query: 101 SILQLCADLKSLEDGKKVHS-IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
            +L++ AD K+L+ GK +H+ +I  +    D+ V  + L+ ++  C  +   R +F+ + 
Sbjct: 30  QLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMR 89

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGN----- 213
              V  W  LM  Y   G   E L LFK M S+  +  + Y F+ ++   +  G      
Sbjct: 90  KRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGW 149

Query: 214 -------------------------SRR--VKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                                    SRR  VK A  ++ E+   DV S+N +I+G + NG
Sbjct: 150 QCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENG 209

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
              + LEV   M++     D  T VT    C++   L  G  VH    +     +   ++
Sbjct: 210 YPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSS 269

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            ++DMY KCG++  A +VF ++  ++VVSWT+++A Y++ G F+ A+  F  M  +G+ P
Sbjct: 270 AIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLP 329

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           + Y    +L++CA    L  GK +H  IK++  +  + V NAL++MY+K GS+  A  VF
Sbjct: 330 NEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVF 389

Query: 427 NQMPVKDIVSWNTMI----------GALDLFVAMLQNFE-PDGVTMACILPACASLAALE 475
            +M  +D ++W+ MI           AL +F  ML   E P  VT   +L ACA L +++
Sbjct: 390 LEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQ 449

Query: 476 RGREIHGYILRH-GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
            G      +++  GI         IV +  K G L  A +     P K D+++W  +++ 
Sbjct: 450 EGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSA 509

Query: 534 YGMH 537
             +H
Sbjct: 510 CHVH 513



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 202/395 (51%), Gaps = 30/395 (7%)

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFAL--KACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           L   + +L   A+   L FG+ +HA  +         I   N+L+++Y+KC  +  A  +
Sbjct: 25  LEHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARIL 84

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDGL 383
           F+ M +R+VVSW +++AGY   G+    +RLF+ M+  + + P+ Y   +I+ +C+  G 
Sbjct: 85  FDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQ 144

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
           +  G   H Y  ++ +    YV NAL+ MY++   +  A SV+ ++P  D+ S+N +I  
Sbjct: 145 VVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIING 204

Query: 444 LDLFVAMLQNFEP-----------------DGVTMACILPACASLAALERGREIHGYILR 486
           L      L+N  P                 D VT       C+ L  L  G ++H  + R
Sbjct: 205 L------LENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFR 258

Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
            G   D  V++AI+DMY KCG ++ AR +F+ +  K+++SWT ++A Y  +G   +A+  
Sbjct: 259 TGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNF 318

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
           F +M   G+ P+E +F  +L +C+    +  G +  +    +   E  +     ++++ S
Sbjct: 319 FPEMEVDGLLPNEYTFAVLLNSCAGISALGHG-KLLHTRIKKSGFEDHIIVGNALINMYS 377

Query: 607 RTGNLSEAYR-FIEMMPVAPDATIWGSLLCGCRIH 640
           ++G++  A++ F+EM  +  D+  W +++CG   H
Sbjct: 378 KSGSIEAAHKVFLEM--ICRDSITWSAMICGLSHH 410



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 37/314 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           +YN  I    E G   +A+EVL       I  D  TY +   LC+ LK L  G +VH  +
Sbjct: 197 SYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRM 256

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +G   D  V  S ++ M+  CG++   R+VFN++    V  W  ++  YS+ G F+E+
Sbjct: 257 FRTGAEYDSFV-SSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEA 315

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGN----- 213
           L  F +M+  G+  + YTF+ +L   A                        +VGN     
Sbjct: 316 LNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINM 375

Query: 214 ---SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
              S  ++ AHK+F E+  RD ++W+ MI G   +G+  + L VF+EML         T 
Sbjct: 376 YSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTF 435

Query: 271 VTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           V VLS CA+ G++  G   ++    +      +     ++ +  K G LD A    +   
Sbjct: 436 VGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTP 495

Query: 330 ER-SVVSWTSMIAG 342
            +  VV+W ++++ 
Sbjct: 496 VKWDVVAWRTLLSA 509


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 250/796 (31%), Positives = 413/796 (51%), Gaps = 61/796 (7%)

Query: 77  GNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G LE+A+       +  +  +   + +++ LC  L++   G +V S +  SG+     V 
Sbjct: 124 GYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVA 183

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
            S L+ MF   G + +  ++F++++      WN ++  YS  G   +   +F  M+  G+
Sbjct: 184 NS-LITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 242

Query: 195 AADSYTFSCVLK-----------------CLAVVGNSR---------------RVKDAHK 222
             D+ T   ++                  CL    +S                ++ DA  
Sbjct: 243 RPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 302

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           LF  +S RD++SWN MIS Y+ N  +   L+   ++ +   + +  T  + L  C++ GA
Sbjct: 303 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 362

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L+ G+ VHA  L+    + +   N+L+ MY KC  ++ A +VF+ M    +VS+  +I G
Sbjct: 363 LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGG 422

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA-CDGLLEIGKDVHDYIKENDMQS 401
           YA       A+++F  M   GI+P+   + +I  + A  + L   G+ +H YI      S
Sbjct: 423 YAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLS 482

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
             YV+N+L+ MYAKCG++  + ++FN +  K+IVSWN +I           AL LF+ M 
Sbjct: 483 DEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQ 542

Query: 452 Q-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
               + D V +A  L +CASLA+LE G ++HG  ++ G+ +D  V NA +DMY KCG + 
Sbjct: 543 HAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKM- 601

Query: 511 LARSLFDMIPAKDLIS---WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
               +  ++P + +     W  +I+GY  +G+  +A  TF  M   G +PD V+F+++L 
Sbjct: 602 --DEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLS 659

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSH+GLVD+G  ++N M     + P ++H  C+VDLL R G  +EA +FIE MPV P+ 
Sbjct: 660 ACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPND 719

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            IW SLL   R H  +++  K A+ + EL+P +   YVLL+N+YA   +W +V KLR  +
Sbjct: 720 LIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHM 779

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
               + K P CSW+++K +V+ F  G   H HA+KI + L  + L+++  GY   T  AL
Sbjct: 780 KTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSAL 839

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQT----IRVTKNLRVCGDC----HEMAKF 799
            + DE +KE  L  HSEKLA+A+G++ +P G T    +  + ++  C +     H     
Sbjct: 840 HDTDEEQKEQNLWNHSEKLALAYGLIVVPEGSTQGSAVNTSSSIDACLEPSMYNHLFGDL 899

Query: 800 MSKTARREIVLRDSNR 815
            S+  R   ++ D  R
Sbjct: 900 WSQQKRGSSIILDERR 915



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 195/369 (52%), Gaps = 11/369 (2%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           L + G+   V DA +LF E+ +R+VVSW  ++    +NG  E+ L  +++M   G   + 
Sbjct: 86  LHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNA 145

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
               TV+S C +    + G  V +  + +    ++S  N+L+ M+   G +  A ++F++
Sbjct: 146 NAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDR 205

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M E   +SW +MI+ Y+ +G+      +F  M   G+ PD   + S++  CA       G
Sbjct: 206 MEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHG 265

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
             +H     + + SS+ V NAL++MY+  G ++DAE +F  M  +D++SWNTMI      
Sbjct: 266 SGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQN 325

Query: 442 -GALDLFVAMLQNFE----PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
             + D    + Q F     P+ +T +  L AC+S  AL  G+ +H  +L+  +  +  V 
Sbjct: 326 CNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVG 385

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           N+++ MY KC  +  A  +F  +P  D++S+ ++I GY +   G  A+  F+ MR AGI+
Sbjct: 386 NSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIK 445

Query: 557 PDEVSFISV 565
           P+ ++ I++
Sbjct: 446 PNYITMINI 454



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 195/414 (47%), Gaps = 21/414 (5%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG---AL 283
           ++DR   +W   +SG +  G      E+ + M   G  +    + ++++ C   G    +
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G A+HA   +A     +     LL +Y   G +  A R+F +M ER+VVSWT+++   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE---IGKDVHDYIKENDMQ 400
           +  G  + A+R +R M R+G+  +  A  +++  C   G LE    G  V   +  + +Q
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLC---GSLENEVPGLQVASQVIVSGLQ 177

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD----------LFVAM 450
           + + V+N+L+ M+   G + DAE +F++M   D +SWN MI              +F  M
Sbjct: 178 NQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDM 237

Query: 451 LQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
             +   PD  T+  ++  CAS      G  IH   LR  + +   V NA+V+MY   G L
Sbjct: 238 RHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             A  LF  +  +DLISW  MI+ Y  +    DA+ T   +      P+ ++F S L AC
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGAC 357

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           S  G + +G +  + +  + +++  L     ++ +  +  ++ +A +  + MP 
Sbjct: 358 SSPGALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT 410



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 227/524 (43%), Gaps = 51/524 (9%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
           T ++NA I  +   G   K   V        +  D  T CS++ +CA       G  +HS
Sbjct: 211 TISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHS 270

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           +   S +     V+ + LV M+   G L +   +F  +    +  WN ++  Y +  N  
Sbjct: 271 LCLRSSLDSSVTVINA-LVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNST 329

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS-- 214
           ++L    ++     + +  TFS  L   +                        +VGNS  
Sbjct: 330 DALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLI 389

Query: 215 ------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                   ++DA K+F  +   D+VS+N +I GY       K ++VF  M + G   +  
Sbjct: 390 TMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYI 449

Query: 269 TMVTVLSGCANCGALM-FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           TM+ +    A+   L  +GR +HA+ ++  F  +    N+L+ MY+KCG+L+ +  +F  
Sbjct: 450 TMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNS 509

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           +  +++VSW ++IA   + G  + A++LF  M   G + D   +   L +CA    LE G
Sbjct: 510 ITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEG 569

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
             +H    ++ + S  YV NA MDMY KCG M +   V     ++    WNT+I      
Sbjct: 570 MQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKY 629

Query: 443 -----ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNV 495
                A + F  M+    +PD VT   +L AC+    +++G + +  +    G+S     
Sbjct: 630 GYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKH 689

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPA--KDLISWTIMIAGYGMH 537
              IVD+  + G    A    + +P    DLI W  +++    H
Sbjct: 690 CVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLI-WRSLLSSSRTH 732



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 164/410 (40%), Gaps = 80/410 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLED----GKKVHS 120
           +YN  IG +  + +  KAM+V +S  +S      Y +++ +     S  D    G+ +H+
Sbjct: 415 SYNVLIGGYAVLEDGTKAMQV-FSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHA 473

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            I  +G + D+ V  S L+ M+  CG+L+    +FN I N  +  WN ++    + G+ +
Sbjct: 474 YIIRTGFLSDEYVANS-LITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGE 532

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL----------------- 223
           E+L LF  MQ  G   D     C+ +CL+   +   +++  +L                 
Sbjct: 533 EALKLFIDMQHAGNKLDRV---CLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVN 589

Query: 224 -----------FDEL-------SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                       DE+       + R    WN +ISGY   G  ++  E FK+M+  G   
Sbjct: 590 AAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKP 649

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T V +LS C++ G +                K I + N++   +     +   + + 
Sbjct: 650 DYVTFVALLSACSHAGLV---------------DKGIDYYNSMASSFGVSPGIKHCVCIV 694

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           + +G               R G F  A +    M    + P+     S+L +      LE
Sbjct: 695 DLLG---------------RLGRFAEAEKFIEEMP---VLPNDLIWRSLLSSSRTHKNLE 736

Query: 386 IGKDVHDYIKEND-MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           IG+     + E D    S YV   L ++YA     AD + + + M   +I
Sbjct: 737 IGRKTAKKLLELDPFDDSAYV--LLSNLYATNARWADVDKLRSHMKTINI 784


>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
          Length = 818

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 255/774 (32%), Positives = 394/774 (50%), Gaps = 79/774 (10%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D +  C+++ L A L       ++     E G    D VL +K V M     +  E   V
Sbjct: 86  DPRVTCALVDLLARLGRGPSCARLLHEAAEDGA--KDAVLWNKHVAMLAEAEEWDEAIAV 143

Query: 155 FNKIDNGKV----------FIWNLLMHEYSKTGNFKESLYL--------FKKMQSLGIAA 196
           F ++    V          +   L +  +     F   +Y          + + ++G A 
Sbjct: 144 FREMQARGVPRRRGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMG-AG 202

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS----DRDVVSWNCMISGYIANGVAEKGL 252
               ++ V+ C A +G    V DA +L   +S    + +V +WN ++SG   +G   + L
Sbjct: 203 SVVPWNAVVACCARLG---LVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREAL 259

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
            V   ML  G   D  T+ ++L   AN G L  G  +H F L+     ++     L+DMY
Sbjct: 260 GVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMY 319

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           +KCG LD A +VF+ +  R++ +W S++AGYA  G FD A+ L                 
Sbjct: 320 AKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELV---------------- 363

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-- 430
                              + +K+N +   +   N L+  Y+  G  + A  +  Q+   
Sbjct: 364 -------------------ELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAA 404

Query: 431 --VKDIVSWNTMI------GALD---LFVAMLQN--FEPDGVTMACILPACASLAALERG 477
               ++VSW ++I      G  +    F   +Q    +P  VTM+ +L ACA LA  ++G
Sbjct: 405 GVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKG 464

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           +E+H + LR     D  V+ A++DMY K G LV A+ +F+ I  K+L+    M+ G  +H
Sbjct: 465 KELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVH 524

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G G +AI  F+DM  +G++PD ++F ++L AC   GLV EGW +F+ M  +  ++P  E+
Sbjct: 525 GQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTEN 584

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           YACMVDLL+R G L EA  FIE  P+ P A+ WG+LL GC IH  + LAE  A ++F LE
Sbjct: 585 YACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFRLE 644

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           P N+  Y+L+ N+Y     ++E + L+  +  RG+   PG SWI+I+  +++F   G  H
Sbjct: 645 PYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPH 704

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
           P   +I   L RL  ++K+ GY P T     N  E EKE  L GH+EKLA+ +G++   A
Sbjct: 705 PETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDA 764

Query: 778 GQT-IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            +  +RV KN R+C DCHE+AK +S    R+I+LRD+ RFHHF DG+CSC  +W
Sbjct: 765 SRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 818


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/702 (33%), Positives = 390/702 (55%), Gaps = 51/702 (7%)

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
           RR+FN I+N   F+WN+++  Y +T +   +  L+K M S  + AD+YT+  +++  ++ 
Sbjct: 32  RRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIR 91

Query: 212 GNSRRVKDAHKLFDELS-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
            +    K  H    +L  D DV   N +I+ +           VF E   L    D  + 
Sbjct: 92  RSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVL----DSVSW 147

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++L+G    G +   + ++         + I  +N+++ ++   G +  A ++F++M E
Sbjct: 148 NSILAGYIEIGNVEEAKHIY----HQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLE 203

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + +V+W+++IA + +  +++ AIR F GM + G+  D     S L ACA   ++ +GK +
Sbjct: 204 KDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLI 263

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMA------------------------------ 420
           H    +   +S + + NAL+ MY+KCG +                               
Sbjct: 264 HSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLV 323

Query: 421 -DAESVFNQMPVKDIVSWNTMIGAL---DLF---VAMLQN-----FEPDGVTMACILPAC 468
            +A+++F+ MP KD+VSW++MI      DLF   +A+ Q      F+PD  T+  ++ AC
Sbjct: 324 DNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISAC 383

Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
           A LAALE+G+ +H YI R+G++ +  +   ++DMY+KCG +  A  +F  +  K + +W 
Sbjct: 384 ARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWN 443

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
            +I G  M+G    ++  F++M++  + P+E++F+ VL AC H GLVDEG   F  M ++
Sbjct: 444 ALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHD 503

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             I+P ++HY CMVDLL R G L EA   +  MP+ PD   WG+LL  C+ H + ++  +
Sbjct: 504 HKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRR 563

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
           V   + EL+PD+ G++VLL+N+YA   KW++V ++R  +++  + K PGCS IE  G ++
Sbjct: 564 VGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIH 623

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
            F+AG  +HP    IE +L  + +++K EGY P     L++ DE EKE  L  HSEKLA+
Sbjct: 624 EFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAI 683

Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           AFG++N+     IR+ KNLR+C DCH  AK +SK   R+IV 
Sbjct: 684 AFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVF 725



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 239/489 (48%), Gaps = 54/489 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  TY  ++Q C+  +S  + K+VH+ + + G    D  + + L+  F  C ++ +  RV
Sbjct: 77  DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD-SDVYVRNTLINCFSVCSNMTDACRV 135

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           FN+        WN ++  Y + GN +E+ +++ +M    I A +         + + G  
Sbjct: 136 FNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASN-------SMIVLFGMR 188

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             V +A KLFDE+ ++D+V+W+ +I+ +  N + E+ +  F  M  +G  VD    V+ L
Sbjct: 189 GLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSAL 248

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL---------------- 318
           S CAN   +  G+ +H+ +LK      I+  N L+ MYSKCGD+                
Sbjct: 249 SACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLI 308

Query: 319 ---------------DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
                          D A  +F+ M E+ VVSW+SMI+GYA+  +FD  + LF+ M   G
Sbjct: 309 SWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSG 368

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
            +PD   + S++ ACA    LE GK VH YIK N +  ++ +   L+DMY KCG +  A 
Sbjct: 369 FKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETAL 428

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLA 472
            VF  M  K I +WN +I           +LD+F  M + +  P+ +T   +L AC  + 
Sbjct: 429 EVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMG 488

Query: 473 ALERGREIHGYILRHGISADRNVAN--AIVDMYVKCGVLVLARSLFDMIP-AKDLISWTI 529
            ++ G+  H Y + H      NV +   +VD+  + G L  A  L + +P   D+ +W  
Sbjct: 489 LVDEGQH-HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGA 547

Query: 530 MIAGYGMHG 538
           ++     HG
Sbjct: 548 LLGACKKHG 556



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 34/326 (10%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T  S++  CA L +LE GK VH+ I  +G+ I+  +LG+ L+ M++ CG ++   
Sbjct: 370 KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTIN-VILGTTLIDMYMKCGCVETAL 428

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            VF  +    +  WN L+   +  G  + SL +F  M+   +  +  TF      + V+G
Sbjct: 429 EVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITF------MGVLG 482

Query: 213 NSRRV----KDAHKLFDELSDR----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
             R +    +  H  +  + D     +V  + CM+      G  ++  E+   M      
Sbjct: 483 ACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRM---PMT 539

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            D+AT   +L  C   G    GR V    L         F+  L ++Y+  G  D  + +
Sbjct: 540 PDVATWGALLGACKKHGDSEMGRRV-GRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEI 598

Query: 325 FEKMGERSV--VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
              M +  V  +   SMI         +G I  F  +  +   PD+ AI  +L   A   
Sbjct: 599 RGMMTKHRVLKIPGCSMIEA-------NGVIHEF--LAGDKTHPDMDAIEDMLVEMAMKL 649

Query: 383 LLE-IGKDVHDY---IKENDMQSSLY 404
            LE    D+++    + E + +S+L+
Sbjct: 650 KLEGYTPDINEVLLDVDEEEKESTLF 675



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/342 (20%), Positives = 134/342 (39%), Gaps = 74/342 (21%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGI--VIDDGVLGSKLVFMFVTCGDLKEG 151
           +D     S L  CA+L  +  GK +HS+  + G    I+   L + L++M+  CGD+   
Sbjct: 239 VDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYIN---LQNALIYMYSKCGDIMVA 295

Query: 152 RRVF---------------------NKIDNGK----------VFIWNLLMHEYSKTGNFK 180
           R++F                     N +DN K          V  W+ ++  Y++   F 
Sbjct: 296 RKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFD 355

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------- 221
           E+L LF++MQ  G   D  T   V+   A +    + K  H                   
Sbjct: 356 ETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLI 415

Query: 222 -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                        ++F  + ++ + +WN +I G   NG+ E  L++F  M       +  
Sbjct: 416 DMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEI 475

Query: 269 TMVTVLSGCANCGALMFGRAVHAFAL--KACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
           T + VL  C + G +  G+  H +++         +     ++D+  + G L  A  +  
Sbjct: 476 TFMGVLGACRHMGLVDEGQH-HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLN 534

Query: 327 KMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           +M     V +W +++    + G  +   R+ R ++   ++PD
Sbjct: 535 RMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPD 574


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 225/626 (35%), Positives = 349/626 (55%), Gaps = 14/626 (2%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           RV  A  +FD +  R+ VS N ++SGY ++G  ++ L++ +    + F ++   +   +S
Sbjct: 60  RVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLLRV---VDFGMNEYVLSAAVS 116

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
             AN  +   GR  H +A+KA F+++    N +L MY +C  ++ A +VFE +      +
Sbjct: 117 ATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFA 176

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           + SMI GY   G  DG++ + R M  E  + D  +  ++L  CA      +G  VH    
Sbjct: 177 FNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQAL 236

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALD 445
           +  ++ ++YV +AL+DMY KC  + DA   F  +P K++VSW  ++           AL 
Sbjct: 237 KKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQ 296

Query: 446 LFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           LF+ M ++  +P+  T A  L +CA LAAL  G  +   +++ G      V+NA+++MY 
Sbjct: 297 LFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYS 356

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           K G +  A  +F  +P +D++SW ++I GY  HG   + +  F+ M  A + P  V+F+ 
Sbjct: 357 KSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVG 416

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           VL AC+  GLVDE + + N M  E  I P  EHY CMV LL R G L EA RFI    + 
Sbjct: 417 VLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIG 476

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
            D   W SLL  C+++    L  +VAE + +LEP + G YVLL+N+YA+A +W+ V K+R
Sbjct: 477 TDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVR 536

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
           + +  R ++K+PG SWI +   V++F +    HP   +I   L+ L  ++K  GY P   
Sbjct: 537 KHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFA 596

Query: 745 YALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTA 804
             L + D+  KE  L  HSEKLA+AFG+++ P G TI + KNLR+C DCH   K +S   
Sbjct: 597 VVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVT 656

Query: 805 RREIVLRDSNRFHHFKDGRCSCRGFW 830
            R+IV+RD+ RFH  + G CSC  +W
Sbjct: 657 SRKIVVRDAVRFHCIEGGICSCNDYW 682



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 217/477 (45%), Gaps = 53/477 (11%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           L  GK +H+ +  +     D VL + L+  +  CG +   R VF+ +        NLLM 
Sbjct: 27  LSKGKALHARLITAAHF--DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMS 84

Query: 172 EYSKTGNFKESLYLFKKMQ--------------------------------SLGIAADSY 199
            Y+ +G  KESL L + +                                   G A   Y
Sbjct: 85  GYASSGRHKESLQLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRY 144

Query: 200 TFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
            F+ VL           ++DA K+F+ +S  D  ++N MI+GY+  G  +  L + + M 
Sbjct: 145 VFNAVLYMYC---QCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMT 201

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
                 D  + V VL  CA+    + G  VHA ALK      +   + L+DMY KC  + 
Sbjct: 202 GEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVH 261

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            A R FE + E++VVSWT+++  Y +  +++ A++LF  M  EG++P+ +     L++CA
Sbjct: 262 DANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCA 321

Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
               L  G  +   + +      L VSNALM+MY+K GS+ DA  VF  MP++D+VSWN 
Sbjct: 322 GLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNL 381

Query: 440 MIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRH- 487
           +I            ++ F +ML     P  VT   +L ACA L  ++        +++  
Sbjct: 382 IITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEV 441

Query: 488 GISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWTIMIAG---YGMHGFG 540
           GI+  +     +V +  + G L  A R + +     D+++W  ++     Y  +G G
Sbjct: 442 GITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLG 498



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 184/371 (49%), Gaps = 17/371 (4%)

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
           G L  G+A+HA  + A    ++  +N L+  Y+KCG +  A  VF+ M  R+ VS   ++
Sbjct: 25  GDLSKGKALHARLITAAHF-DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLM 83

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
           +GYA  G    +++L R +V  G+    Y +++ + A A     ++G+  H Y  +    
Sbjct: 84  SGYASSGRHKESLQLLR-VVDFGMNE--YVLSAAVSATANVRSYDMGRQCHGYAVKAGFA 140

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNF 454
              YV NA++ MY +C  M DA  VF  +   D  ++N+MI      G LD  + +++N 
Sbjct: 141 EQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNM 200

Query: 455 EP-----DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
                  D V+   +L  CAS+     G ++H   L+  +  +  V +A+VDMY KC  +
Sbjct: 201 TGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHV 260

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             A   F+++P K+++SWT ++  Y  +    DA+  F DM   G++P+E ++   L +C
Sbjct: 261 HDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSC 320

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           +    +  G      +    + +  L   A M ++ S++G++ +A+R    MP+  D   
Sbjct: 321 AGLAALRTGNALGACVMKTGHWDHLLVSNALM-NMYSKSGSIEDAHRVFISMPL-RDVVS 378

Query: 630 WGSLLCGCRIH 640
           W  ++ G   H
Sbjct: 379 WNLIITGYAHH 389



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 164/375 (43%), Gaps = 35/375 (9%)

Query: 107 ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIW 166
           A+++S + G++ H    ++G      V  + L +M+  C  +++  +VF  +     F +
Sbjct: 119 ANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVL-YMYCQCAHMEDASKVFESVSGFDAFAF 177

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----------------- 209
           N +++ Y   G    SL + + M       D  ++  VL   A                 
Sbjct: 178 NSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALK 237

Query: 210 ---------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                          + G    V DA++ F+ L +++VVSW  +++ Y  N + E  L++
Sbjct: 238 KRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQL 297

Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
           F +M   G   +  T    L+ CA   AL  G A+ A  +K      +  +N L++MYSK
Sbjct: 298 FLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSK 357

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
            G ++ A RVF  M  R VVSW  +I GYA  G+    +  F  M+   + P       +
Sbjct: 358 SGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGV 417

Query: 375 LHACACDGLL-EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES-VFNQMPVK 432
           L ACA  GL+ E    ++  +KE  +         ++ +  + G + +AE  + N     
Sbjct: 418 LSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGT 477

Query: 433 DIVSWNTMIGALDLF 447
           D+V+W +++ +  ++
Sbjct: 478 DVVAWRSLLNSCQVY 492



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 141/316 (44%), Gaps = 47/316 (14%)

Query: 66  YNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ I  + + G L+ ++ ++   + E  K D  +Y ++L  CA +K    G +VH+   
Sbjct: 177 FNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQAL 236

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +  + ++  V GS LV M+  C  + +  R F  +    V  W  +M  Y++   ++++L
Sbjct: 237 KKRLELNVYV-GSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDAL 295

Query: 184 YLFKKMQSLGIAADSYTF--------------------SCVLKC------------LAVV 211
            LF  M+  G+  + +T+                    +CV+K             + + 
Sbjct: 296 QLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMY 355

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
             S  ++DAH++F  +  RDVVSWN +I+GY  +G+A +G+E F  ML+        T V
Sbjct: 356 SKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFV 415

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFN------NTLLDMYSKCGDLDGAIR-V 324
            VLS CA       G    AF       KE+           ++ +  + G LD A R +
Sbjct: 416 GVLSACAQ-----LGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFI 470

Query: 325 FEKMGERSVVSWTSMI 340
                   VV+W S++
Sbjct: 471 VNNCIGTDVVAWRSLL 486


>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 642

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/604 (37%), Positives = 348/604 (57%), Gaps = 23/604 (3%)

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH------AFALKACF 298
           +G     L +  ++   G   D  ++  ++  C   G +  GRA+H      A       
Sbjct: 44  DGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGAT 103

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR-EGVFDGAIRLFR 357
              +  +N+L+ MY+K G LD A+ +F  M +R+VVSWT+++A  A   G    A+R   
Sbjct: 104 HGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLV 163

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M R+G+  + Y  +S+L AC   G+L     +H  I +  + S ++V ++L+D Y K G
Sbjct: 164 EMRRDGVAANSYTFSSVLGACGTPGVLAA---MHADIIKVGLDSDVFVRSSLIDAYMKLG 220

Query: 418 SMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILP 466
            +     VF++M   D+V WN++I          GA++LF+ M ++ F  +  T+  +L 
Sbjct: 221 DLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLR 280

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
           AC  +  LE GR++H ++L++    D  + NA++DMY KCG L+ A +LF  +  +D+IS
Sbjct: 281 ACTGMVMLEVGRQVHAHVLKY--DRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVIS 338

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           W+ MI+G   +G   +A+  F+ M+  G  P+ ++ + VL+ACSH+GLV++GW +F  M 
Sbjct: 339 WSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMD 398

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
               I+P+ EH  CMVDLL R G L EA +FI  M   PD+ IW +LL  CR+H    LA
Sbjct: 399 KLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLA 458

Query: 647 EKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGK 706
              A  + +LEP++ G  +LL+N+YA+  +W   +K  + +  +G+KK PG SWIE+   
Sbjct: 459 SYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKL 518

Query: 707 VNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKL 766
           V++F+AG  SHP + +I   L RL    K  GY P+T + L +    +KE  L  HSEKL
Sbjct: 519 VHVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKL 578

Query: 767 AMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           A+AFG +N   G+ +R+ KNLR+CGDCH  AK +SKT  + I++RD  RFHHF+ G CSC
Sbjct: 579 AIAFGTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSC 638

Query: 827 RGFW 830
             +W
Sbjct: 639 GDYW 642



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 184/369 (49%), Gaps = 24/369 (6%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYI-ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           + DA +LF  +  R+VVSW  +++    A G  ++ L    EM   G   +  T  +VL 
Sbjct: 123 LDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVLG 182

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C   G L    A+HA  +K     ++   ++L+D Y K GDLD    VF++M    +V 
Sbjct: 183 ACGTPGVLA---AMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVV 239

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W S+IAG+A+ G   GA+ LF  M   G   +   +TS+L AC    +LE+G+ VH ++ 
Sbjct: 240 WNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVL 299

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           + D    L + NAL+DMY KCG + DA+++F++M  +D++SW+TMI           AL 
Sbjct: 300 KYD--RDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALK 357

Query: 446 LFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMY 503
           +F  M  +   P+ +TM  +L AC+    +E G      + +  GI  +R   N +VD+ 
Sbjct: 358 VFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLL 417

Query: 504 VKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS- 561
            + G L  A     +M    D + W  ++    MH      +A++       +EP++   
Sbjct: 418 GRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNA--TLASYAATEILKLEPEDQGA 475

Query: 562 --FISVLYA 568
              +S +YA
Sbjct: 476 RILLSNIYA 484



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 189/414 (45%), Gaps = 47/414 (11%)

Query: 72  RFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC-----E 124
           R C  G    A+ +L   ++   + D  + C +++LC    ++ DG+ +H  +       
Sbjct: 40  RLCLDGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGG 99

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT-GNFKESL 183
            G       + + LV M+   G L +   +F  +    V  W  ++   +   G  KE+L
Sbjct: 100 GGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEAL 159

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVG--------------------NSRRVKDAHKL 223
               +M+  G+AA+SYTFS VL      G                     S  +    KL
Sbjct: 160 RFLVEMRRDGVAANSYTFSSVLGACGTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKL 219

Query: 224 ---------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                    FDE+   D+V WN +I+G+  +G     +E+F  M   GF  +  T+ +VL
Sbjct: 220 GDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVL 279

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             C     L  GR VHA  LK  + +++  +N LLDMY KCG L  A  +F +M +R V+
Sbjct: 280 RACTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVI 337

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW++MI+G A+ G    A+++F  M  EG  P+   +  +L AC+  GL+E   D   Y 
Sbjct: 338 SWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVE---DGWHYF 394

Query: 395 KEND----MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           +  D    +Q      N ++D+  + G + +A     +M  + D V W T++GA
Sbjct: 395 RSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGA 448


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 250/736 (33%), Positives = 376/736 (51%), Gaps = 53/736 (7%)

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
           CGD +   ++F+K+    +  +N L+  Y +  N  + + LF K + LG+  D Y  +  
Sbjct: 14  CGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGA 73

Query: 205 LKCLAVVGNSR--------------------------------RVKDAHKLFDELSDRDV 232
           L   +  GN                                  +V  A  LFD     D 
Sbjct: 74  LTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDG 133

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC--GALMFGRAVH 290
           VSWN +I+GY+ NG  E+ L + ++M   G   +  T+ + L  C++   G  MFG  +H
Sbjct: 134 VSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLH 193

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
             A+K     ++     LLDMY+K G LD AI++F++M +++VV + +M+AG  ++   +
Sbjct: 194 DHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 253

Query: 351 G-----AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
                 A+ LF  M   GI+P ++  +S+L AC      +  K VH  + +N + S  Y+
Sbjct: 254 DKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYI 313

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFE 455
            + L+D+Y+  GSM DA   FN +    IV    MI           AL LF  +L   E
Sbjct: 314 GSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEE 373

Query: 456 -PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            PD    + I+ +CA++  L  G +I G+  + GIS      N+ + MY K G L  A  
Sbjct: 374 KPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANL 433

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
            F  +   D++SW+ MI     HG   +A+  F  M+  GIEP+  +F+ VL ACSH GL
Sbjct: 434 TFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGL 493

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           V+EG R+F+ M  +  ++  ++H  C+VDLL R G L++A   I  +    +  +W +LL
Sbjct: 494 VEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALL 553

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             CRIH +   A++VA+ V ELEP  +  YVLL N+Y +A       K+R  +  R +KK
Sbjct: 554 SACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKK 613

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
            PG SWI+I  KV  FV+G  SH ++ +I + L  +    KR       +  L    E E
Sbjct: 614 EPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKR---LDSAKDILGYKIEHE 670

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
               +  HSEKLA+AFG+L L     +RV KNLR+C DCH   K  S   +RE+++RDS 
Sbjct: 671 HLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSV 730

Query: 815 RFHHFKDGRCSCRGFW 830
           RFHHFKDG CSC  +W
Sbjct: 731 RFHHFKDGSCSCGDYW 746



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 209/466 (44%), Gaps = 55/466 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            YN+ I  + ++ NL+K M +L+   +    K+D       L  C+   +L  GK +H +
Sbjct: 34  TYNSLISGYVQMSNLDKVM-ILFDKARRLGLKLDKYNCAGALTACSQSGNLSAGKMIHGL 92

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           I   G+     VL + L+ M+  CG +   R +F+  D      WN L+  Y + G ++E
Sbjct: 93  ILVYGLG-SQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEE 151

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLA--------------------------VVGN-- 213
            L + +KM   G+A ++YT    LK  +                          VVG   
Sbjct: 152 LLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTAL 211

Query: 214 ------SRRVKDAHKLFDELSDRDVVSWNCMISGY-----IANGVAEKGLEVFKEMLNLG 262
                 +  + DA ++FD++ D++VV +N M++G      I +  A K L +F EM + G
Sbjct: 212 LDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCG 271

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
               + T  ++L  C       F + VHA   K     +    + L+D+YS  G +  A+
Sbjct: 272 IKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDAL 331

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
             F  +   ++V  T+MI GY + G F+ A+ LF  ++    +PD +  ++I+ +CA  G
Sbjct: 332 LCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMG 391

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI- 441
           +L  G+ +  +  +  +       N+ + MYAK G +  A   F QM   DIVSW+TMI 
Sbjct: 392 MLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMIC 451

Query: 442 ---------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG 477
                     AL  F  M     EP+      +L AC+    +E G
Sbjct: 452 SNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEG 497



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 173/348 (49%), Gaps = 29/348 (8%)

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
           KCGD   A ++F+KM + ++V++ S+I+GY +    D  + LF    R G++ D Y    
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD 433
            L AC+  G L  GK +H  I    + S + ++N+L+DMY+KCG +  A  +F+     D
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 434 IVSWNTMI------GALDLFVAMLQNFEPDGV-----TMACILPACAS--LAALERGREI 480
            VSWN++I      G  +  + +LQ    +G+     T+   L AC+S        G  +
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           H + ++ G+  D  V  A++DMY K G L  A  +FD +  K+++ +  M+AG       
Sbjct: 193 HDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETI 252

Query: 541 CD-----AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR-YECNIEPK 594
            D     A+  F +M+  GI+P   ++ S+L AC    ++ E ++F   +    C     
Sbjct: 253 EDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKAC----IIVEDFKFAKQVHALMCKNGLL 308

Query: 595 LEHY--ACMVDLLSRTGNLSEA---YRFIEMMPVAP-DATIWGSLLCG 636
            + Y  + ++DL S  G++ +A   +  I  + + P  A I+G L  G
Sbjct: 309 SDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNG 356


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/753 (32%), Positives = 399/753 (52%), Gaps = 53/753 (7%)

Query: 77   GNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
            G LE+A+       +  +  +   + +++ LC  L++   G +V S +  SG+     V 
Sbjct: 426  GYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVA 485

Query: 135  GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
             S L+ MF   G + +  ++F++++      WN ++  YS  G   +   +F  M+  G+
Sbjct: 486  NS-LITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 544

Query: 195  AADSYTFSCVLK-----------------CLAVVGNSR---------------RVKDAHK 222
              D+ T   ++                  CL    +S                ++ DA  
Sbjct: 545  RPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 604

Query: 223  LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
            LF  +S RD++SWN MIS Y+ N  +   L+   ++ +   + +  T  + L  C++ GA
Sbjct: 605  LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 664

Query: 283  LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
            L+ G+ VHA  L+    + +   N+L+ MY KC  ++ A +VF+ M    +VS+  +I G
Sbjct: 665  LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGG 724

Query: 343  YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA-CDGLLEIGKDVHDYIKENDMQS 401
            YA       A+++F  M   GI+P+   + +I  + A  + L   G+ +H YI      S
Sbjct: 725  YAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLS 784

Query: 402  SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
              YV+N+L+ MYAKCG++  + ++FN +  K+IVSWN +I           AL LF+ M 
Sbjct: 785  DEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQ 844

Query: 452  Q-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
                + D V +A  L +CASLA+LE G ++HG  ++ G+ +D  V NA +DMY KCG + 
Sbjct: 845  HAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKM- 903

Query: 511  LARSLFDMIPAKDLIS---WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
                +  ++P + +     W  +I+GY  +G+  +A  TF  M   G +PD V+F+++L 
Sbjct: 904  --DEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLS 961

Query: 568  ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
            ACSH+GLVD+G  ++N M     + P ++H  C+VDLL R G  +EA +FIE MPV P+ 
Sbjct: 962  ACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPND 1021

Query: 628  TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
             IW SLL   R H  +++  K A+ + EL+P +   YVLL+N+YA   +W +V KLR  +
Sbjct: 1022 LIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHM 1081

Query: 688  SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
                + K P CSW+++K +V+ F  G   H HA+KI + L  + L+++  GY   T  AL
Sbjct: 1082 KTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSAL 1141

Query: 748  INADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
             + DE +KE  L  HSEKLA+A+G++ +P G T
Sbjct: 1142 HDTDEEQKEQNLWNHSEKLALAYGLIVVPEGST 1174



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 195/369 (52%), Gaps = 11/369 (2%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           L + G+   V DA +LF E+ +R+VVSW  ++    +NG  E+ L  +++M   G   + 
Sbjct: 388 LHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNA 447

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
               TV+S C +    + G  V +  + +    ++S  N+L+ M+   G +  A ++F++
Sbjct: 448 NAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDR 507

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M E   +SW +MI+ Y+ +G+      +F  M   G+ PD   + S++  CA       G
Sbjct: 508 MEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHG 567

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
             +H     + + SS+ V NAL++MY+  G ++DAE +F  M  +D++SWNTMI      
Sbjct: 568 SGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQN 627

Query: 443 --ALDLFVAMLQNFE----PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
             + D    + Q F     P+ +T +  L AC+S  AL  G+ +H  +L+  +  +  V 
Sbjct: 628 CNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVG 687

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           N+++ MY KC  +  A  +F  +P  D++S+ ++I GY +   G  A+  F+ MR AGI+
Sbjct: 688 NSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIK 747

Query: 557 PDEVSFISV 565
           P+ ++ I++
Sbjct: 748 PNYITMINI 756



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 200/418 (47%), Gaps = 21/418 (5%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG- 281
           LFDE++DR   +W   +SG +  G   K  E+ + M   G  +    + ++++ C   G 
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358

Query: 282 --ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              +  G A+HA   +A     +     LL +Y   G +  A R+F +M ER+VVSWT++
Sbjct: 359 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTAL 418

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE---IGKDVHDYIKE 396
           +   +  G  + A+R +R M R+G+  +  A  +++  C   G LE    G  V   +  
Sbjct: 419 MVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLC---GSLENEVPGLQVASQVIV 475

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD----------L 446
           + +Q+ + V+N+L+ M+   G + DAE +F++M   D +SWN MI              +
Sbjct: 476 SGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLV 535

Query: 447 FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M  +   PD  T+  ++  CAS      G  IH   LR  + +   V NA+V+MY  
Sbjct: 536 FSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSA 595

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
            G L  A  LF  +  +DLISW  MI+ Y  +    DA+ T   +      P+ ++F S 
Sbjct: 596 AGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSA 655

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           L ACS  G + +G +  + +  + +++  L     ++ +  +  ++ +A +  + MP 
Sbjct: 656 LGACSSPGALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT 712



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 227/524 (43%), Gaps = 51/524 (9%)

Query: 63   TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
            T ++NA I  +   G   K   V        +  D  T CS++ +CA       G  +HS
Sbjct: 513  TISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHS 572

Query: 121  IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            +   S +     V+ + LV M+   G L +   +F  +    +  WN ++  Y +  N  
Sbjct: 573  LCLRSSLDSSVTVINA-LVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNST 631

Query: 181  ESLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS-- 214
            ++L    ++     + +  TFS  L   +                        +VGNS  
Sbjct: 632  DALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLI 691

Query: 215  ------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                    ++DA K+F  +   D+VS+N +I GY       K ++VF  M + G   +  
Sbjct: 692  TMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYI 751

Query: 269  TMVTVLSGCANCGALM-FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
            TM+ +    A+   L  +GR +HA+ ++  F  +    N+L+ MY+KCG+L+ +  +F  
Sbjct: 752  TMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNS 811

Query: 328  MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
            +  +++VSW ++IA   + G  + A++LF  M   G + D   +   L +CA    LE G
Sbjct: 812  ITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEG 871

Query: 388  KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
              +H    ++ + S  YV NA MDMY KCG M +   V     ++    WNT+I      
Sbjct: 872  MQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKY 931

Query: 443  -----ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNV 495
                 A + F  M+    +PD VT   +L AC+    +++G + +  +    G+S     
Sbjct: 932  GYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKH 991

Query: 496  ANAIVDMYVKCGVLVLARSLFDMIP--AKDLISWTIMIAGYGMH 537
               IVD+  + G    A    + +P    DLI W  +++    H
Sbjct: 992  CVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLI-WRSLLSSSRTH 1034



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 158/343 (46%), Gaps = 18/343 (5%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGA---IRVFEKMGERSVVSWTSMIAGYAR 345
           +H  A++          NTLL  Y +  D   A   + +F++M +R+  +W + ++G  R
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE---IGKDVHDYIKENDMQSS 402
            G    A  + RGM   G+    +A+ S++ AC   G  E    G  +H       +  +
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNFEP 456
           +Y+  AL+ +Y   G ++DA+ +F +MP +++VSW  ++      G L+  +   +    
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440

Query: 457 DGV-----TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
           DGV       A ++  C SL     G ++   ++  G+    +VAN+++ M+   G +  
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHD 500

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           A  LFD +   D ISW  MI+ Y   G        F+DMR  G+ PD  +  S++  C+ 
Sbjct: 501 AEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCAS 560

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           S     G    ++     +++  +     +V++ S  G LS+A
Sbjct: 561 SDHFSHGSGIHSLC-LRSSLDSSVTVINALVNMYSAAGKLSDA 602



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 164/410 (40%), Gaps = 80/410 (19%)

Query: 65   NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLED----GKKVHS 120
            +YN  IG +  + +  KAM+V +S  +S      Y +++ +     S  D    G+ +H+
Sbjct: 717  SYNVLIGGYAVLEDGTKAMQV-FSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHA 775

Query: 121  IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
             I  +G + D+ V  S L+ M+  CG+L+    +FN I N  +  WN ++    + G+ +
Sbjct: 776  YIIRTGFLSDEYVANS-LITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGE 834

Query: 181  ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL----------------- 223
            E+L LF  MQ  G   D     C+ +CL+   +   +++  +L                 
Sbjct: 835  EALKLFIDMQHAGNKLDRV---CLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVN 891

Query: 224  -----------FDEL-------SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                        DE+       + R    WN +ISGY   G  ++  E FK+M+  G   
Sbjct: 892  AAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKP 951

Query: 266  DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
            D  T V +LS C++ G +                K I + N++   +     +   + + 
Sbjct: 952  DYVTFVALLSACSHAGLV---------------DKGIDYYNSMASSFGVSPGIKHCVCIV 996

Query: 326  EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
            + +G               R G F  A +    M    + P+     S+L +      LE
Sbjct: 997  DLLG---------------RLGRFAEAEKFIEEMP---VLPNDLIWRSLLSSSRTHKNLE 1038

Query: 386  IGKDVHDYIKEND-MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
            IG+     + E D    S YV   L ++YA     AD + + + M   +I
Sbjct: 1039 IGRKTAKKLLELDPFDDSAYV--LLSNLYATNARWADVDKLRSHMKTINI 1086



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 6/130 (4%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGA---IRVFEKMGERSVVSWTSMIAGYAR 345
           +H  A++          NTLL  Y +  D   A   + +F++M +R+  +W + ++G  R
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE---IGKDVHDYIKENDMQSS 402
            G    A  + RGM   G+    +A+ S++ AC   G  E    G  +H       +  +
Sbjct: 98  CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 157

Query: 403 LYVSNALMDM 412
           +Y+  AL+ +
Sbjct: 158 VYIGRALLHL 167


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/734 (33%), Positives = 390/734 (53%), Gaps = 70/734 (9%)

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           R+ +++       +NL++  YS+ G    SL  F + ++     D +T++  L   +   
Sbjct: 57  RLLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRAL 116

Query: 213 NSRRVKDAH--------------------------------KLFDELSDRDVVSWNCMIS 240
           + R  K  H                                ++FD   +RD VSWN ++S
Sbjct: 117 DVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLS 176

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC---------ANCGALMFGRAVHA 291
           GY+  G  E+ LEVF  M   G   +   + +++  C          + G      AVH 
Sbjct: 177 GYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHG 236

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD- 350
             +KA    ++   + ++DMY+K G L  A+ +F+ + + +V+   +MIAG+ RE   D 
Sbjct: 237 CVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADV 296

Query: 351 --GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+ L+  +   G++P  ++ +SIL AC   G    GK +H  + ++  Q  +Y+ +A
Sbjct: 297 AREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSA 356

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNFE--------PD 457
           L+D+Y+  G M D    F  +P +D+V W ++I      +LF   L+ F+        PD
Sbjct: 357 LIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPD 416

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
              M+ ++ ACASLA    G +I    ++ G +    + N+ + M  + G +  A   F 
Sbjct: 417 VFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQ 476

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI-EPDEVSFISVLYACSHSGLVD 576
            + ++D++SW+ +I+ +  HG   DA+  FN+M  A +  P+E++F+S+L ACSH GLVD
Sbjct: 477 EMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVD 536

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           EG R++ +M  E  + P ++H  C+VDLL R G L++A  FI       DA +W SLL  
Sbjct: 537 EGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLAS 596

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
           CRIH +++  + VA+ + +LEP ++  YV+L N+Y +A +     K R+ +  RG+KK P
Sbjct: 597 CRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKERGVKKEP 656

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
           G SWIE+   V+ FVAG  SHP +K I     R   EM        ++ A I++   E++
Sbjct: 657 GLSWIELSSGVHSFVAGDKSHPESKAI----YRKVAEM-------VSKVAGISS--REQD 703

Query: 757 VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
           +A C HSEKLA+AFG+++LP    IRV KNLRVC DCH   + +SK+ RREI+LRD+ RF
Sbjct: 704 LAGC-HSEKLAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMELISKSERREIILRDAIRF 762

Query: 817 HHFKDGRCSCRGFW 830
           H F+DG CSC G+W
Sbjct: 763 HRFRDGSCSCGGYW 776



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 228/503 (45%), Gaps = 59/503 (11%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +D  TY + L  C+    +  GK VH+++   G+     +  S +  M+  CG++ E RR
Sbjct: 100 VDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNS-VASMYARCGEMGEARR 158

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV--- 210
           VF+  +      WN L+  Y + G  +E+L +F  M   G+  +S+    ++KC A    
Sbjct: 159 VFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSS 218

Query: 211 ------VGNSRRVKDAH--------------------------------KLFDELSDRDV 232
                 VG  R  +  H                                 LF  + D +V
Sbjct: 219 YAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNV 278

Query: 233 VSWNCMISGYI---ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           +  N MI+G+    A  VA + L ++ E+ + G      +  ++L  C   G   FG+ +
Sbjct: 279 IVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQI 338

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H   LK  F  ++   + L+D+YS  G ++   R F  + ++ VV WTS+I+G  +  +F
Sbjct: 339 HGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELF 398

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
           + A+RLF+  VR G+ PDV+A++S+++ACA   +   G+ +     ++       + N+ 
Sbjct: 399 EEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSF 458

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML--QNFEPD 457
           + M A+ G +  A   F +M  +D+VSW+ +I           AL +F  ML  +   P+
Sbjct: 459 IHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPN 518

Query: 458 GVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLF 516
            +T   IL AC+    ++ G   +G +   +G+S        +VD+  + G L  A +  
Sbjct: 519 EITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFI 578

Query: 517 -DMIPAKDLISWTIMIAGYGMHG 538
            D     D + W  ++A   +HG
Sbjct: 579 RDSAFHDDAVVWRSLLASCRIHG 601



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 215/450 (47%), Gaps = 36/450 (8%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A +L DE+  R+ VS+N +I  Y   G+    L  F         VD  T    L+ C+ 
Sbjct: 55  AARLLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSR 114

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              +  G+AVHA  +       +  +N++  MY++CG++  A RVF+   ER  VSW ++
Sbjct: 115 ALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNAL 174

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD---------GLLEIGKDV 390
           ++GY R G  +  + +F  M R G+  + +A+ SI+  CA           G   I + V
Sbjct: 175 LSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAV 234

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  + +  + + L++++A++DMYAK G++ +A ++F  +P  +++  N MI         
Sbjct: 235 HGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAA 294

Query: 443 -----ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
                AL L+  +  +  +P   + + IL AC        G++IHG +L+H    D  + 
Sbjct: 295 DVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIG 354

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           +A++D+Y   G +      F  +P +D++ WT +I+G   +    +A+  F +  + G+ 
Sbjct: 355 SALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLR 414

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC-NIEPKLEHYACM----VDLLSRTGNL 611
           PD  +  SV+ AC+   +   G +       +C  ++     +  M    + + +R+G++
Sbjct: 415 PDVFAMSSVMNACASLAVARTGEQI------QCLAVKSGFNRFTAMGNSFIHMCARSGDV 468

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
             A R  + M  + D   W +++     HH
Sbjct: 469 DAATRRFQEME-SRDVVSWSAVI-SSHAHH 496



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 187/384 (48%), Gaps = 27/384 (7%)

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK--CGDLDGAIRVFEKMGERSVVSW 336
           +C AL    AVHA   +A  +  +   N LL  Y +   G    A R+ ++M  R+ VS+
Sbjct: 11  SCAALPHVAAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSY 70

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
             +I  Y+R G+   ++  F          D +   + L AC+    +  GK VH  +  
Sbjct: 71  NLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVL 130

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDL 446
             + + L++SN++  MYA+CG M +A  VF+    +D VSWN ++            L++
Sbjct: 131 GGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEV 190

Query: 447 FVAMLQN-FEPDGVTMACILPACASLAALER------GR---EIHGYILRHGISADRNVA 496
           F  M ++    +   +  I+  CAS ++         GR    +HG +++ G+ AD  +A
Sbjct: 191 FSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLA 250

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH---GFGCDAIATFNDMRQA 553
           +A++DMY K G L  A +LF  +P  ++I    MIAG+          +A+  +++++  
Sbjct: 251 SAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSR 310

Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           G++P E SF S+L AC+ +G    G +    +  + + +  +   + ++DL S +G + +
Sbjct: 311 GMQPSEFSFSSILRACNLAGEFGFGKQIHGQV-LKHSFQGDVYIGSALIDLYSGSGCMED 369

Query: 614 AYRFIEMMPVAPDATIWGSLLCGC 637
            YR    +P   D  IW S++ GC
Sbjct: 370 GYRCFRSLP-KQDVVIWTSVISGC 392



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 172/428 (40%), Gaps = 82/428 (19%)

Query: 67  NAEIGRFC--EVGNLEKAMEVLYSSEKSK---IDTKTYCSILQLCADLKSLEDGKKVHSI 121
           NA I  FC  E  ++ +    LYS  +S+       ++ SIL+ C        GK++H  
Sbjct: 282 NAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQ 341

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           + +      D  +GS L+ ++   G +++G R F  +    V IW  ++    +   F+E
Sbjct: 342 VLKHSFQ-GDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEE 400

Query: 182 SLYLFKKMQSLGIAADSYTFSCVL---------------KCLAV---------VGN---- 213
           +L LF++    G+  D +  S V+               +CLAV         +GN    
Sbjct: 401 ALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIH 460

Query: 214 ----SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF-NVDLA 268
               S  V  A + F E+  RDVVSW+ +IS +  +G A   L VF EML+      +  
Sbjct: 461 MCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEI 520

Query: 269 TMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           T +++L+ C++ G +  G R       +   S  I     ++D+  + G L  A      
Sbjct: 521 TFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADA------ 574

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
                          + R+  F                 D     S+L +C   G +E G
Sbjct: 575 -------------EAFIRDSAF---------------HDDAVVWRSLLASCRIHGDMERG 606

Query: 388 KDVHDYIKENDMQSSL-YVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VSWNTMI 441
           + V D I + +  SS  YV   L +MY   G ++ A    + M  + +     +SW  + 
Sbjct: 607 QLVADKIMDLEPTSSASYV--ILYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELS 664

Query: 442 GALDLFVA 449
             +  FVA
Sbjct: 665 SGVHSFVA 672


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/677 (36%), Positives = 377/677 (55%), Gaps = 20/677 (2%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+    + G+ +    L  ++   G AA S   +  L  + +  +   +  A +LF  + 
Sbjct: 176 LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHL--ITMYSHCADLASALRLFAAMP 233

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            R+ VSW  ++SG   N +    L  F  M   G       + +     A  GA +  R+
Sbjct: 234 RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARS 293

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
             A A    F  E+   + L DMYSKCG L  A RVF++M ++  V+WT+MI GYA+ G 
Sbjct: 294 CTASA-SVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 352

Query: 349 FDGAIRLFRGMVREG-IEPDVYAITSILHACAC--DGLLEIGKDVHDYIKENDMQSSLYV 405
            + A+  FR M REG +  D +   S+L A     DG L   K +H  + +   +  + V
Sbjct: 353 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLS--KSIHCCVTKAGFELEVAV 410

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIG----------ALDLFVAML-QN 453
            NAL+DMYAK   +  A  V    P   ++VS  +MI           AL ++V +  Q 
Sbjct: 411 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 470

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
            EP+  T + ++  CA  A LE+G ++H  +++  +  D  V + +VDMY KCG++ L+ 
Sbjct: 471 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 530

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
            LF+ I  +  I+W  +I  +  HG G +AI  F+ M  +GI P+ ++F+S+L ACSH+G
Sbjct: 531 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAG 590

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
           LVDEG ++F  M+    IEPK EHY+C++D   R G L EAY+FI  MP+ P+A  W SL
Sbjct: 591 LVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSL 650

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
           L  CR+    +L E  A+++ +LEP NTG +V L+ +YA   +WE+VK +R+ +    +K
Sbjct: 651 LGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIK 710

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           K PG SW++   K ++F +   SHP  K I   L+ L   +K EGY P T +   N +++
Sbjct: 711 KLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDI 770

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
            KE  L  HSE++A+AF ++++PA + I V KNLR+C DCH   KF+ K  RR+I++RD+
Sbjct: 771 AKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDN 830

Query: 814 NRFHHFKDGRCSCRGFW 830
           +RFHHF +GRCSC  +W
Sbjct: 831 SRFHHFVNGRCSCGDYW 847



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 210/484 (43%), Gaps = 46/484 (9%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S+LQ C     L  G+ +H+ +  SG       L + L+ M+  C DL    R+F  +  
Sbjct: 175 SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR 234

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-----------------SC 203
                W  L+   S+     ++L  F  M+  G+A   +                   SC
Sbjct: 235 RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSC 294

Query: 204 VLKC-------LAVVGNSRR-------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                      L V  N          + +A ++FD++  +D V+W  MI GY  NG  E
Sbjct: 295 TASASVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLE 354

Query: 250 KGLEVFKEMLNLGF-NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
             +  F++M   G    D     +VLS           +++H    KA F  E++  N L
Sbjct: 355 AAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNAL 414

Query: 309 LDMYSKCGDLDGAIRVFE-KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           +DMY+K  D++ A RV +   G  +VVS TSMI GY      + A+ ++  + R+G+EP+
Sbjct: 415 IDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPN 474

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
            +  +S++  CA   LLE G  +H  + + D+    +V + L+DMY KCG ++ +  +FN
Sbjct: 475 EFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFN 534

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALER 476
           ++  +  ++WN +I           A+  F  M+     P+ +    +L AC+    ++ 
Sbjct: 535 EIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDE 594

Query: 477 G-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGY 534
           G +  +     HGI       + I+D Y + G L  A      +P K +   W  ++   
Sbjct: 595 GLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGAC 654

Query: 535 GMHG 538
            M G
Sbjct: 655 RMRG 658



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 225/502 (44%), Gaps = 56/502 (11%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
           S+LQ C     L  G+ +H+ +  SG       L + L+ M+  C DL    R+F  +  
Sbjct: 25  SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR 84

Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
                W  L+   S+     ++L  F  M+  G+A     +                   
Sbjct: 85  RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYET----------------- 127

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
            K  + L  +  ++ +   SG     V   G  +++             + ++L  C   
Sbjct: 128 -KFHNTLGPKHTLAASHCHSGPTLM-VKYWGQRLWRPPAPAAATT--VHLASLLQSCGRA 183

Query: 281 GALMFGRAVHA-FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
           G L  GR +HA   L    +      N L+ MYS C DL  A+R+F  M  R+ VSWT++
Sbjct: 184 GDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTL 243

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC----------ACDGLLEIGKD 389
           ++G ++  +   A+  F  M R G+ P  +A++S   A           +C     +G D
Sbjct: 244 VSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFD 303

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GA 443
                      + L+V++ L DMY+KCG +++A  VF+QMP KD V+W  MI      G+
Sbjct: 304 -----------TELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 352

Query: 444 LDLFVAMLQNFEPDGVTMACILPACASLAA---LERG---REIHGYILRHGISADRNVAN 497
           L+  V   ++ + +G+  A     C+ L+A   L+ G   + IH  + + G   +  V N
Sbjct: 353 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN 412

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           A++DMY K   +  A  +  + P   +++S T MI GY       +A+  + ++R+ G+E
Sbjct: 413 ALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVE 472

Query: 557 PDEVSFISVLYACSHSGLVDEG 578
           P+E +F S++  C+   L+++G
Sbjct: 473 PNEFTFSSMIKGCAMQALLEQG 494



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 181/429 (42%), Gaps = 92/429 (21%)

Query: 270 MVTVLSGCANCGALMFGRAVHA-FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           + ++L  C   G L  GR +HA   L    +      N L+ MYS C DL  A+R+F  M
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD--VYA---------------- 370
             R+ VSWT++++G ++  +   A+  F  M R G+ P   +Y                 
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142

Query: 371 ------------------------------ITSILHACACDGLLEIGKDVH-DYIKENDM 399
                                         + S+L +C   G L  G+ +H   +     
Sbjct: 143 HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAA 202

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL-FVAMLQNFEPDG 458
            +S +++N L+ MY+ C  +A A  +F  MP ++ VSW T++  L    +          
Sbjct: 203 AASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAA 262

Query: 459 VTMACILP----------------------ACASLAALERGREIHGYILRHGISADRNVA 496
           +  A + P                      +C + A++             G   +  VA
Sbjct: 263 MRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASV-------------GFDTELFVA 309

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-I 555
           + + DMY KCG+L  A  +FD +P KD ++WT MI GY  +G    A+ +F DM++ G +
Sbjct: 310 SNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLV 369

Query: 556 EPDEVSFISVLYACSHSGLVDEGW--RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
             D+  F SVL A   SG + +GW  +  +    +   E ++     ++D+ +++ ++  
Sbjct: 370 GADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVES 426

Query: 614 AYRFIEMMP 622
           A R +++ P
Sbjct: 427 ASRVLKIDP 435



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 86/410 (20%), Positives = 167/410 (40%), Gaps = 91/410 (22%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI---DTKTYCSILQLCADLKSLEDGKKVHSII 122
           + A I  + + G+LE A+      ++  +   D   +CS+L     LK     K +H  +
Sbjct: 340 WTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCV 399

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNL-----LMHEYSKTG 177
            ++G  ++  V  + L+ M+    D++   RV  KID G    WN+     ++  Y +T 
Sbjct: 400 TKAGFELEVAVRNA-LIDMYAKSMDVESASRVL-KIDPGG---WNVVSGTSMIDGYIETD 454

Query: 178 NFKESLYLFKKMQSLGIAADSYTFS-----CVLKCL--------AVVGNSRRVKDAH--- 221
             +E+L ++ +++  G+  + +TFS     C ++ L        A V  +  ++D+    
Sbjct: 455 CVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGS 514

Query: 222 ----------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                           +LF+E+  R  ++WN +I+ +  +G   + ++ F  M+  G   
Sbjct: 515 TLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRP 574

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +    V++L+ C++ G                                    +D  ++ F
Sbjct: 575 NHIAFVSLLTACSHAGL-----------------------------------VDEGLKYF 599

Query: 326 EKMGERSVVS-----WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
             M E   +      ++ +I  Y R G  D A +    M    I+P+ Y   S+L AC  
Sbjct: 600 YSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEM---PIKPNAYGWCSLLGACRM 656

Query: 381 DGLLEIGK-DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            G  E+G+    + +K     + ++VS  L  +YA  G   D ++V   M
Sbjct: 657 RGSKELGEVAAQNLMKLEPGNTGIHVS--LSGIYASLGQWEDVKAVRKLM 704



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRN-VANAIVDMYVKCGVLVLARSLFD 517
           V +A +L +C     L RGR +H  ++  G +A    +AN ++ MY  C  L  A  LF 
Sbjct: 21  VHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFA 80

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
            +P ++ +SWT +++G   +    DA+A F  MR+AG+ P  + +
Sbjct: 81  AMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIY 125


>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
 gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 212/508 (41%), Positives = 311/508 (61%), Gaps = 13/508 (2%)

Query: 336 WTSMIAGYAREGVFD-GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           ++++I  YA        AI  +  M+  GI P+ YA   +L ACA    L +GK VH  +
Sbjct: 76  FSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSL 135

Query: 395 KENDMQSSLYVSNALMDMYAKC-GSMADAESVFNQMPVKDIVSWNTMIG----------A 443
            +      ++V N ++ MY  C G M  A  +F++MP  D V+W  MIG          A
Sbjct: 136 VKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGA 195

Query: 444 LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           + LF  M +    PD VTM  +L AC  L ALE G+ I  YI +  +     ++NA+VDM
Sbjct: 196 VGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDM 255

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           + KCG +  A  LF  +  + ++SWT +I G  MHG G +A++ F +M+ +G+ P++++F
Sbjct: 256 FAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAF 315

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           I +L ACSHSGLV+ G ++F+ M  +  I PK+EHY CMVDLLSR G ++EA  F+E MP
Sbjct: 316 IGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMP 375

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + P+  IW +L+  CR+H E+KL E +++ +   EP +   YVLL+N+Y +   WE+  K
Sbjct: 376 IEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSK 435

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R  + ++G++K PG + IE+  +++ F+ G  SH    +I  ++  +  EMKR GY P 
Sbjct: 436 IRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPT 495

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           T    ++ DE +KE AL  HSEKLA+AF +LN P G  IR+TKNLRVCGDCH  +KF+SK
Sbjct: 496 TTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISK 555

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REIV+RD +RFHHF+DG+CSC  FW
Sbjct: 556 IYNREIVMRDRSRFHHFRDGQCSCGDFW 583



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 152/295 (51%), Gaps = 14/295 (4%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC-G 316
           ML  G + +      VL  CA    L  G+AVH   +K  F  +I   NT++ MY  C G
Sbjct: 100 MLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSG 159

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
            ++ A ++F++M +   V+WT+MI GYAR G   GA+ LFR M   G+ PD   + S+L 
Sbjct: 160 GMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLS 219

Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
           AC   G LE+GK +  YI++  +  ++ +SNAL+DM+AKCG +  A  +F  M  + IVS
Sbjct: 220 ACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVS 279

Query: 437 WNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYIL 485
           W ++I           A+ LF  M      P+ +    +L AC+    +ERGR+    + 
Sbjct: 280 WTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMT 339

Query: 486 RH-GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
           R  GI         +VD+  + G++  A    + +P + + I W  +I+   +HG
Sbjct: 340 RQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHG 394



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 179/384 (46%), Gaps = 49/384 (12%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           ILQ C  L  L    ++H+ I + G   +  VL +K          +     +   +++ 
Sbjct: 13  ILQACNTLPKL---AQLHTHIIKLGFQNNPLVL-TKFTSASSNLDAIPYAMSLVFSVEDA 68

Query: 162 KV---FIWNLLMHEYSKTGNFKE-SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           +V   F+++ ++  Y+++   K  +++ +  M   GI+ + Y F  VLK  A + +    
Sbjct: 69  RVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLG 128

Query: 218 KDAH---------------------------------KLFDELSDRDVVSWNCMISGYIA 244
           K  H                                 KLFDE+   D V+W  MI GY  
Sbjct: 129 KAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYAR 188

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G +   + +F++M   G   D  TMV+VLS C + GAL  G+ + ++  K    K +  
Sbjct: 189 LGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVEL 248

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
           +N L+DM++KCGD+D A+ +F  M +R++VSWTS+I G A  G    A+ LF  M   G+
Sbjct: 249 SNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGM 308

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS----NALMDMYAKCGSMA 420
            P+  A   +L AC+  GL+E G+    Y  E   Q  +         ++D+ ++ G + 
Sbjct: 309 VPEDIAFIGLLSACSHSGLVERGR---QYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVT 365

Query: 421 DAESVFNQMPVK-DIVSWNTMIGA 443
           +A     +MP++ + + W T+I A
Sbjct: 366 EALEFVERMPIEPNPIIWRTLISA 389



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 126/285 (44%), Gaps = 17/285 (5%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
            + A IG +  +G    A+ +    + + +  D  T  S+L  C DL +LE GK + S I
Sbjct: 178 TWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYI 237

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            E   V+    L + LV MF  CGD+ +   +F  +    +  W  ++   +  G   E+
Sbjct: 238 -EKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEA 296

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSWNC 237
           + LF++M++ G+  +   F   +  L+   +S  V+   + F E++ +      +  + C
Sbjct: 297 VSLFEEMKASGMVPEDIAF---IGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGC 353

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M+      G+  + LE  + M       +     T++S C   G L  G ++    ++  
Sbjct: 354 MVDLLSRAGLVTEALEFVERM---PIEPNPIIWRTLISACRVHGELKLGESISKQLIRNE 410

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV--VSWTSMI 340
              E ++   L ++Y K  D +   ++   MG++ +  V  ++MI
Sbjct: 411 PMHESNY-VLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMI 454


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 260/812 (32%), Positives = 418/812 (51%), Gaps = 54/812 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  +   G  ++A+++ Y  ++   K +  ++ SIL  C     LE G+++HS I
Sbjct: 119 SWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHI 178

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G   D  V  + L+ M+  CG L+  R+VFN++    V  W  ++  Y + G+ KE+
Sbjct: 179 TKAGYESDVNV-STALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEA 237

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNS---- 214
             LF+K+   G   +  +F+ +L                            +VGN+    
Sbjct: 238 FVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISM 297

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 + +A ++FD L   + VSWN MI+GY   G  E+   +F++M   GF  D  T 
Sbjct: 298 YARCGSLANARQVFDNLRSPNRVSWNAMIAGY-GEGFMEEAFRLFRDMQQKGFQPDRFTY 356

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++L+ CA+   L  G+ +H+  ++  +  +++    L+ MY+KCG L+ A +VF +M E
Sbjct: 357 ASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPE 416

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           ++ VSW + IA   R G    A ++F+ M R+ + PD     ++L++C      E G+ +
Sbjct: 417 KNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYI 476

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I +  M S+  V+NAL+ MY +CG +ADA  VF ++  +D+ SWN MI         
Sbjct: 477 HGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGAN 536

Query: 443 --ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             A DLF+    +  + D  T   +L A A+L  L+ GR+IHG + + G+  D  +   +
Sbjct: 537 GSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTL 596

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + MY KCG L  A S+F  +  KD++ W  M+A Y     G DA+  F  MR  G+ PD 
Sbjct: 597 IKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDS 656

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            ++ SVL AC+  G ++ G +F   ++ E  +E    HYACMV  L R   L EA  FIE
Sbjct: 657 ATYTSVLNACARLGAIEHGKKFHTQLK-EAAMETDTRHYACMVAALGRASLLKEAEEFIE 715

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV-LLANVYAEAEKWE 678
            +    DA +W SLL  CRIHH V LAE   EH+ +++  ++      L N+YA A +WE
Sbjct: 716 EISSESDALMWESLLVACRIHHNVGLAETAVEHLLDVKAQSSPAVCEQLMNIYAAAGRWE 775

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           +V  ++  +   GL     C+ IE+  + + F+    S P    +E  ++ L  +M  +G
Sbjct: 776 DVSVIKATMREAGLLAPKSCT-IEVNSEFHTFMTNHFS-PQI-GVEDKIEELVWKMMDKG 832

Query: 739 YFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAK 798
           +     YA  ++ E E+  + C   E LA+A+G+ + P G  +R   +  V    H M K
Sbjct: 833 FLLDPHYAPNDSREKERLFSHC--PELLAVAYGLEHTPPGVLVRCVTDSPVTDPSHRMLK 890

Query: 799 FMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           F+SK   R I +RD N FH+FKDG CSC  +W
Sbjct: 891 FISKAYNRGIFVRDPNCFHNFKDGICSCGDYW 922



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 204/679 (30%), Positives = 332/679 (48%), Gaps = 52/679 (7%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           T + +A++GR    G   +    L      + +   Y   LQ C   KSL +GKKVH  +
Sbjct: 18  TWDASAKVGRNTWKGKSIRGGVQLLGKRGVQANLNFYARRLQECVQAKSLAEGKKVHDHM 77

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             S     D  L + L+ M+  CG +++   VF  +++  V  WN ++  Y+  G  +E+
Sbjct: 78  -RSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEA 136

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKC----------------LAVVGNSRRV--------- 217
           + LF +MQ  G+  +  +F  +L                  +   G    V         
Sbjct: 137 VDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINM 196

Query: 218 -------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                  + A K+F+E+ +R+VVSW  MISGY+ +G +++   +F++++  G   +  + 
Sbjct: 197 YCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSF 256

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            ++L  C N   L  G  +HA+  +A   +E+   N L+ MY++CG L  A +VF+ +  
Sbjct: 257 ASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRS 316

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
            + VSW +MIAGY  EG  + A RLFR M ++G +PD +   S+L  CA    L  GK++
Sbjct: 317 PNRVSWNAMIAGYG-EGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKEL 375

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I     ++ + V+ AL+ MYAKCGS+ +A  VFNQMP K+ VSWN  I         
Sbjct: 376 HSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSE 435

Query: 443 --ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             A  +F  M + +  PD VT   +L +C S    ERGR IHG I + G+ ++  VANA+
Sbjct: 436 KEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANAL 495

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + MY +CG L  AR +F  I  +DL SW  MIA Y  HG    A   F   +  G + D+
Sbjct: 496 ISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDK 555

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            +FI+VL A ++   +D G +   ++  +  +E  +     ++ + S+ G+L +AY   +
Sbjct: 556 YTFINVLRAIANLEDLDAGRKIHGLVE-KAGLEKDIRILTTLIKMYSKCGSLRDAYSVFK 614

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE---PDNTGYYVLLANVYAEAEK 676
            +    D   W ++L         + A K+ + +  LE   PD+  Y  +L N  A    
Sbjct: 615 NVQ-EKDVVCWNAMLAAYNHSDHGQDALKLFQQM-RLEGVNPDSATYTSVL-NACARLGA 671

Query: 677 WEEVKKLREKISRRGLKKN 695
            E  KK   ++    ++ +
Sbjct: 672 IEHGKKFHTQLKEAAMETD 690


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/630 (37%), Positives = 354/630 (56%), Gaps = 18/630 (2%)

Query: 217  VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
            ++ A K+F  +   D +SWN +IS    NG  E+ +  +  M     +     +++ LS 
Sbjct: 431  IESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSS 490

Query: 277  CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
            CA    L  G+ VH  A+K     + S +N L+ MY +CG +    +VF  M E   VSW
Sbjct: 491  CAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSW 550

Query: 337  TSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
             +M+   A  +      +++F  M+R G+ P+     ++L A +   +LE+GK VH  + 
Sbjct: 551  NTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVM 610

Query: 396  ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTMIG----------AL 444
            ++ +     V NAL+  YAK G M   E +F  M   +D +SWN+MI           A+
Sbjct: 611  KHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAM 670

Query: 445  DLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            D    M+ + +  D  T + IL ACAS+AALERG E+H + +R  + +D  V +A+VDMY
Sbjct: 671  DCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMY 730

Query: 504  VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
             KCG +  A  LF+ +  ++  SW  MI+GY  HG G  AI  F +M ++   PD V+F+
Sbjct: 731  SKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFV 790

Query: 564  SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            SVL ACSH+GLV+ G  +F MM  +  I P++EHY+C++DLL R G + +   +I+ MP+
Sbjct: 791  SVLSACSHAGLVERGLEYFEMMP-DHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPI 849

Query: 624  APDATIWGSLLCGCRIHHE---VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
             P+A IW ++L  CR   +   + L  + +  + E+EP N   YVL +N +A    WE+ 
Sbjct: 850  EPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDT 909

Query: 681  KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
             K R  + +   KK  G SW+ +   V+ F+AG  SHP+ K+I   L  L   ++  GY 
Sbjct: 910  AKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAGYV 969

Query: 741  PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
            P T YAL + +E  KE  L  HSEKLA+AF +L   +   IR+ KNLRVCGDCH   +++
Sbjct: 970  PLTEYALYDLEEENKEELLSYHSEKLAIAF-VLTRSSSGPIRIMKNLRVCGDCHIAFRYI 1028

Query: 801  SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            S+   R+I+LRDS RFHHFKDG+CSC  +W
Sbjct: 1029 SQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 171/637 (26%), Positives = 296/637 (46%), Gaps = 75/637 (11%)

Query: 98  TYCSILQLCAD--LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC--GDLKEGRR 153
           T+ ++L+ C D     L    +VH ++ ++    +  V  + L+ M+ +C  G     +R
Sbjct: 167 TFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNA-LISMYGSCTVGPPILAQR 225

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ----------------SL----- 192
           VF+      +  WN LM  Y+K G+   +  LFK MQ                SL     
Sbjct: 226 VFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAAS 285

Query: 193 -------------------GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVV 233
                              G ++D Y  S ++   A  G +   KD   +F  L  ++ V
Sbjct: 286 LSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKD---IFLSLKQKNAV 342

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG----ALMFGRAV 289
           + N +I G +    +E+ +++F    N   +V+  T V +LS  A        L  GR V
Sbjct: 343 TLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADTYVVLLSALAEYSISEEGLRIGRVV 401

Query: 290 HAFALKACFSK-EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           H   L+   +  +I+ +N L++MY+KCG ++ A ++F+ M     +SW ++I+   + G 
Sbjct: 402 HGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGN 461

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH-DYIKEN-DMQSSLYVS 406
            + A+  +  M +  I P  +A+ S L +CA   LL  G+ VH D +K   D+ +S  VS
Sbjct: 462 CEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTS--VS 519

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL-----------DLFVAMLQ-NF 454
           N L+ MY +CG+M+D   VFN M   D VSWNTM+G +            +F  M++   
Sbjct: 520 NVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGL 579

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            P+ VT   +L A + L+ LE G+++H  +++HG+  D  V NA++  Y K G +     
Sbjct: 580 IPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEH 639

Query: 515 LF-DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
           LF +M   +D ISW  MI+GY  +G   +A+     M  +G   D  +F  +L AC+   
Sbjct: 640 LFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVA 699

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
            ++ G    +      ++E  +   + +VD+ S+ G +  A +    M    + + W S+
Sbjct: 700 ALERGME-LHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFS-WNSM 757

Query: 634 LCGCRIHHEVKLAEKVAEHVFELE--PDNTGYYVLLA 668
           + G   H   + A ++ E +      PD+  +  +L+
Sbjct: 758 ISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLS 794



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 198/416 (47%), Gaps = 38/416 (9%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQL--CADLKSLEDGKKVHSII 122
           ++N  I    + GN E+A+       +S I    +  I  L  CA LK L  G++VH   
Sbjct: 448 SWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDA 507

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN-FKE 181
            + G+ +D  V  + LV M+  CG + +  +VFN +       WN +M   + +     E
Sbjct: 508 VKWGLDLDTSV-SNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISE 566

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------- 221
            + +F  M   G+  +  TF  +L  L+ +      K  H                    
Sbjct: 567 IVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALIS 626

Query: 222 ------------KLFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                        LF  +SDR D +SWN MISGYI NG  ++ ++    M++ G  +D  
Sbjct: 627 CYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCC 686

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T   +L+ CA+  AL  G  +HAF +++    ++   + L+DMYSKCG +D A ++F  M
Sbjct: 687 TFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSM 746

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            +R+  SW SMI+GYAR G+   AI +F  M+R    PD     S+L AC+  GL+E G 
Sbjct: 747 TQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGL 806

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           +  + + ++ +   +   + ++D+  + G +   +    +MP++ + + W T++ A
Sbjct: 807 EYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVA 862



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 234/506 (46%), Gaps = 54/506 (10%)

Query: 80  EKAMEVLYSSEKS-KIDTKTYCSILQLCADL----KSLEDGKKVHSIICESGIVIDDGVL 134
           E+A+++   +  +  ++  TY  +L   A+     + L  G+ VH  +  +G+      +
Sbjct: 358 EEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAV 417

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
            + LV M+  CG ++   ++F  ++      WN ++    + GN +E++  +  M+   I
Sbjct: 418 SNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCI 477

Query: 195 AADSYTF-----SCV----------LKCLAV-----------------VGNSRRVKDAHK 222
           +  ++       SC           + C AV                  G    + D  K
Sbjct: 478 SPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWK 537

Query: 223 LFDELSDRDVVSWNCMISGYIANGVA--EKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
           +F+ +++ D VSWN M+ G +A+      + ++VF  M+  G   +  T + +L+  +  
Sbjct: 538 VFNSMAEHDEVSWNTMM-GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPL 596

Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE-RSVVSWTSM 339
             L  G+ VHA  +K    ++   +N L+  Y+K GD+     +F  M + R  +SW SM
Sbjct: 597 SVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSM 656

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I+GY   G    A+     M+  G   D    + IL+ACA    LE G ++H +   + +
Sbjct: 657 ISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHL 716

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
           +S + V +AL+DMY+KCG +  A  +FN M  ++  SWN+MI           A+++F  
Sbjct: 717 ESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEE 776

Query: 450 MLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           ML++ E PD VT   +L AC+    +ERG E    +  HGI       + ++D+  + G 
Sbjct: 777 MLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGK 836

Query: 509 LVLARSLFDMIPAKD--LISWTIMIA 532
           +   +     +P +   LI  T+++A
Sbjct: 837 IDKIKEYIQRMPIEPNALIWRTVLVA 862



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 219/447 (48%), Gaps = 31/447 (6%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML---NLGFNVDLATMVT 272
           R+  A ++FDE+ +R+ VSW C++SGY+ +G+AE+   VF+ ML     G      T  T
Sbjct: 111 RLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGT 170

Query: 273 VLSGCANCGA--LMFGRAVHAFALKACFSKEISFNNTLLDMYSKC--GDLDGAIRVFEKM 328
           +L  C + G   L F   VH    K  ++   +  N L+ MY  C  G    A RVF+  
Sbjct: 171 LLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGT 230

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLF----RGMVREGIEPDVYAITSILHACACDGLL 384
             R +++W ++++ YA++G       LF    RG  R  + P  +   S++ A +     
Sbjct: 231 PIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGS 290

Query: 385 EIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-- 441
               D V  ++ ++   S LYV +AL+  +A+ G   +A+ +F  +  K+ V+ N +I  
Sbjct: 291 SAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVG 350

Query: 442 --------GALDLFVAMLQNFEPDGVTMACILPACA----SLAALERGREIHGYILRHGI 489
                    A+ +FV      + +  T   +L A A    S   L  GR +HG++LR G+
Sbjct: 351 LVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGL 410

Query: 490 SADR-NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
           +  +  V+N +V+MY KCG +  A  +F ++ A D ISW  +I+    +G   +A+  ++
Sbjct: 411 TDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYS 470

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSR 607
            MRQ+ I P   + IS L +C+   L+  G +   + +++  +++  + +   +V +   
Sbjct: 471 LMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSN--VLVKMYGE 528

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLL 634
            G +S+ ++    M    D   W +++
Sbjct: 529 CGAMSDYWKVFNSM-AEHDEVSWNTMM 554



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 178/374 (47%), Gaps = 31/374 (8%)

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H   +K   + ++   N L++ Y+K   L  A +VF++M ER+ VSWT +++GY   G+
Sbjct: 83  LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142

Query: 349 FDGAIRLFRGMVRE---GIEPDVYAITSILHACACDGLLEIG--KDVHDYIKENDMQSSL 403
            + A R+FR M+RE   G  P  +   ++L AC   G   +G    VH  + + +  S+ 
Sbjct: 143 AEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNT 202

Query: 404 YVSNALMDMYAKC--GSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML 451
            V NAL+ MY  C  G    A+ VF+  P++D+++WN ++              LF  M 
Sbjct: 203 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQ 262

Query: 452 Q-----NFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANAIVDMYVK 505
           +        P   T   ++ A +  +       ++  ++L+ G S+D  V +A+V  + +
Sbjct: 263 RGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFAR 322

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
            G+   A+ +F  +  K+ ++   +I G     F  +A+  F   R   ++ +  +++ +
Sbjct: 323 HGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADTYVVL 381

Query: 566 LYACSHSGLVDEGWRF-----FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
           L A +   + +EG R       +M+R     + K+     +V++ ++ G +  A +  ++
Sbjct: 382 LSALAEYSISEEGLRIGRVVHGHMLRTGLT-DLKIAVSNGLVNMYAKCGAIESASKIFQL 440

Query: 621 MPVAPDATIWGSLL 634
           M  A D   W +++
Sbjct: 441 ME-ATDRISWNTII 453



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 22/201 (10%)

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----- 442
           +++H  + +  +   L++ N L++ YAK   +A A  VF++MP ++ VSW  ++      
Sbjct: 81  ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140

Query: 443 -----ALDLFVAMLQNFE----PDGVTMACILPACASLAALERG--REIHGYILRHGISA 491
                A  +F AML+  +    P   T   +L AC        G   ++HG + +   ++
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYAS 200

Query: 492 DRNVANAIVDMYVKC--GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
           +  V NA++ MY  C  G  +LA+ +FD  P +DLI+W  +++ Y   G        F D
Sbjct: 201 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKD 260

Query: 550 MRQAG----IEPDEVSFISVL 566
           M++      + P E +F S++
Sbjct: 261 MQRGDSRIQLRPTEHTFGSLI 281


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/647 (35%), Positives = 352/647 (54%), Gaps = 51/647 (7%)

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
            +++  + +L+ L    ++  +  A  +FDE+   D   WN MI  Y+ +   ++ + +F
Sbjct: 33  GNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLF 92

Query: 256 KEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
            +M +     +D  ++  V+  C        G+ +H   LK     ++     L++MY+K
Sbjct: 93  FQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAK 152

Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
            GD++ A  + ++M                                     PD+     +
Sbjct: 153 FGDIEIARNILDEMAH-----------------------------------PDLVPYNVL 177

Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           L      G + +  D+ D + E D+ S     N ++  +A  G +  A+ +F++   +D+
Sbjct: 178 LAEYVRVGEINLAHDLFDRMPERDLVSW----NTMIHGHASLGDVGTAKKLFDRTCERDL 233

Query: 435 VSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGY 483
           +SW++MI A          L LF  M L N  PD VTM  +L AC  + AL  G+ IH  
Sbjct: 234 ISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHEC 293

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
           I R+ I  D  +  ++VDMY KCG +  +  +F+ +  +D+ +W+ MI G   HGFG  A
Sbjct: 294 IERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELA 353

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
           +  F+ M    I+P++V+FI VL ACSH GLVDEGW +F  M    ++ PK+EHY C+VD
Sbjct: 354 LDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVD 413

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGY 663
           +L R G L EA   I+ MP APDA +W +LL  CRI+  V++AE+   ++ ELEP   G 
Sbjct: 414 ILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGN 473

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
           YVLL+N+Y++A++W++V  +R  +    ++K PG S IE+   V+ FVAG  SHP +KKI
Sbjct: 474 YVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKI 533

Query: 724 ESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRV 783
             +L  +   +K  GY P T   L + DE EKE AL  HSEKLA+AFG+L+   G TIR+
Sbjct: 534 LRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRI 593

Query: 784 TKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            KNLRVC DCH   K +S+T +R I++RD NRFHHF +G CSC+ +W
Sbjct: 594 VKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 197/387 (50%), Gaps = 13/387 (3%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSK---IDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +N  I  +    N +++M + +     +   ID+ +   ++Q C  LK   +G+K+H+ +
Sbjct: 72  WNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQV 131

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G+   D  + + L+ M+   GD++  R + +++ +  +  +N+L+ EY + G    +
Sbjct: 132 LKIGLG-SDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLA 190

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
             LF +M       D  +++ ++   A +G+   V  A KLFD   +RD++SW+ MI+ Y
Sbjct: 191 HDLFDRMPE----RDLVSWNTMIHGHASLGD---VGTAKKLFDRTCERDLISWSSMIAAY 243

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
                + + L +F EM       D  TMV+VLS C + GAL  G+ +H    +     ++
Sbjct: 244 AKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDL 303

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
               +L+DMY+KCGD+D ++RVF  M  R V +W++MI G A  G  + A+  F  M+ E
Sbjct: 304 KLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISE 363

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMAD 421
            I+P+      +L AC+  GL++ G      + K  D+   +     ++D+  + G + +
Sbjct: 364 DIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQE 423

Query: 422 AESVFNQMP-VKDIVSWNTMIGALDLF 447
           A  +   MP   D + W  ++GA  ++
Sbjct: 424 AMELIKSMPFAPDAIVWRALLGACRIY 450



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 134/332 (40%), Gaps = 87/332 (26%)

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMAD---AESVFNQMPVKDIVSWNTMIGA--- 443
           +H  I +  +  + +V   L+     C S  D   A SVF+++P  D   WNTMI A   
Sbjct: 22  IHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLN 81

Query: 444 -------LDLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  + LF  M        D  +++ ++ AC  L     G+++H  +L+ G+ +D  
Sbjct: 82  SQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLF 141

Query: 495 VANAIVDMYVKCGVLVLARS-------------------------------LFDMIPAKD 523
           V  A+++MY K G + +AR+                               LFD +P +D
Sbjct: 142 VETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERD 201

Query: 524 LISWTIMIAGYGMHG-------------------------------FGCDAIATFNDMRQ 552
           L+SW  MI G+   G                                  +A+  F++M+ 
Sbjct: 202 LVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQL 261

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC----NIEPKLEHYACMVDLLSRT 608
           A + PD+V+ +SVL AC   G +  G      M +EC     IE  L+    +VD+ ++ 
Sbjct: 262 ANVLPDKVTMVSVLSACGDVGALGMG-----KMIHECIERNRIEIDLKLGTSLVDMYAKC 316

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           G++  + R    M    D   W +++ G   H
Sbjct: 317 GDIDNSLRVFNGMN-NRDVFAWSAMIMGLANH 347


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/633 (35%), Positives = 358/633 (56%), Gaps = 24/633 (3%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           +A ++FD   + D VSWN ++SGY+  G  E+ L+VF  M + G   +   + +++  CA
Sbjct: 156 EARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCA 215

Query: 279 NCGAL--MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           +   +      AVH   +KA    ++   + ++DMY+K G L  A+ +F+ + + +V+ +
Sbjct: 216 SGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVF 275

Query: 337 TSMIAGYAREGVFDG------AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
            +MIAG+ R+    G      A+ L+  M   G++P  +  +SIL AC   G    GK +
Sbjct: 276 NAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQI 335

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLF 447
           H  + ++      Y+ +AL+D+Y+  G M D    F  +P +DIV+W +MI      +LF
Sbjct: 336 HGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELF 395

Query: 448 VAMLQNFE--------PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
              L+ F+        PD  TM+ ++ ACASLA    G +I    +++G +    + N+ 
Sbjct: 396 EKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSF 455

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + M  + G +      F  + ++D++SW+ +I+ +  HG   DA+  FN+M  A + P+E
Sbjct: 456 IHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNE 515

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+F++VL ACSH GLVD+G R++ +M+ E  + P ++H  C+VDLL R G L++A  FI 
Sbjct: 516 VTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIR 575

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
                 DA +W SLL  CRIH +++  + VA+ + +LEP ++  YV+L N+Y +A +   
Sbjct: 576 DSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSL 635

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
             K R+ +  RG+KK PG SWIE++  V+ FVAG  SHP +  I   L  +  ++++   
Sbjct: 636 ASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEK--- 692

Query: 740 FPKTRYALINADEM-EKEVALCG-HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
              T  A   +D +   E  L G HSEK+A+AFG+++LP    IRV KNLRVC DCH   
Sbjct: 693 LANTDNASTGSDGISSSEQNLVGCHSEKIAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTM 752

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K +S +  REI+LRD  RFHHF+ G CSC  +W
Sbjct: 753 KLISGSENREIILRDGIRFHHFRGGSCSCGDYW 785



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 135/514 (26%), Positives = 242/514 (47%), Gaps = 45/514 (8%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCA 278
           A +L DE+  R+ VS+N +IS Y   G+  + LE F       G  VD  T    L+ C+
Sbjct: 55  AARLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACS 114

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
               L  G+AVHA  +       +  +N+L  MY+ CG++  A RVF+   E   VSW S
Sbjct: 115 RALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNS 174

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA--CDGLLEIGKDVHDYIKE 396
           +++GY R G  +  +++F  M   G+  + +A+ SI+  CA   D    I + VH  + +
Sbjct: 175 LLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVK 234

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------------- 442
             + + L++++A++DMYAK G++ +A ++F  +P  +++ +N MI               
Sbjct: 235 AGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVS 294

Query: 443 --ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL L+  M  +  +P   T + IL AC        G++IHG +L+H    D  + +A+
Sbjct: 295 REALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSAL 354

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           +D+Y   G +      F  +P +D+++WT MI+G   +     A+  F +    G++PD 
Sbjct: 355 IDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDL 414

Query: 560 VSFISVLYACSHSGLVDEGWRFFNM-MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            +  SV+ AC+   +   G +   + ++Y  N    + +    + + +R+G++    R  
Sbjct: 415 FTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGN--SFIHMCARSGDVDAVTRRF 472

Query: 619 EMMPVAPDATIWGSLLC-----GC-----RIHHEVKLAEKVAEHVFELE----------- 657
           + M  + D   W +++      GC     RI +E+  A+     V  L            
Sbjct: 473 QEME-SRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLV 531

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
            D   YY ++ N Y  +   + V  + + + R G
Sbjct: 532 DDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAG 565



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 133/553 (24%), Positives = 247/553 (44%), Gaps = 69/553 (12%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           +YN  I  +   G   +A+E    +  +   ++D  TY + L  C+    L  GK VH++
Sbjct: 69  SYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAM 128

Query: 122 ICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
               G+   +GV L + L  M+ +CG++ E RRVF+  +      WN L+  Y + G  +
Sbjct: 129 TVLDGL--GNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGARE 186

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------------------------ 216
           E+L +F  M   G+  +S+    ++KC A   +  R                        
Sbjct: 187 ETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASA 246

Query: 217 ----------VKDAHKLFDELSDRDVVSWNCMISGY------IANGVAEKGLEVFKEMLN 260
                     + +A  LF  + D +V+ +N MI+G+      +   V+ + L ++ EM +
Sbjct: 247 MIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQS 306

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
            G      T  ++L  C   G   FG+ +H   LK  F  +    + L+D+YS  G ++ 
Sbjct: 307 RGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMED 366

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
             R F  + ++ +V+WTSMI+G  +  +F+ A+RLF+  +  G++PD++ ++S+++ACA 
Sbjct: 367 GYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACAS 426

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
             +   G+ +     +        + N+ + M A+ G +      F +M  +D+VSW+ +
Sbjct: 427 LAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAV 486

Query: 441 IG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYIL-RHG 488
           I           AL +F  M+     P+ VT   +L AC+    ++ G   +  +   +G
Sbjct: 487 ISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYG 546

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
           +S        +VD+  + G L  A +   D     D + W  ++A   +HG         
Sbjct: 547 LSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHG--------- 597

Query: 548 NDMRQAGIEPDEV 560
            DM +  +  D++
Sbjct: 598 -DMERGQLVADQI 609



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 223/486 (45%), Gaps = 75/486 (15%)

Query: 101 SILQLCADLKSL--EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           SI++ CA    +     + VH  + ++G+  D   L S ++ M+   G L     +F  +
Sbjct: 209 SIIKCCASGSDVGRHIAEAVHGCVVKAGLDADL-FLASAMIDMYAKRGALTNAVALFKSV 267

Query: 159 DNGKVFIWNLLMHEYSKTGNF------KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            +  V ++N ++  + +          +E+L L+ +MQS G+    +TFS +L+   + G
Sbjct: 268 PDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAG 327

Query: 213 --------------------------------NSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                           +S  ++D ++ F  L  +D+V+W  MIS
Sbjct: 328 EFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMIS 387

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           G + N + EK L +F+E +  G   DL TM +V++ CA+      G  +   A+K  F++
Sbjct: 388 GCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNR 447

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
             +  N+ + M ++ GD+D   R F++M  R VVSW+++I+ +A+ G    A+R+F  M+
Sbjct: 448 FTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMM 507

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSM 419
              + P+     ++L AC+  GL++ G   ++ +K E  +  ++     ++D+  + G +
Sbjct: 508 NAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRL 567

Query: 420 ADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGRE 479
           ADAE+      ++D                    F  D V    +L +C     +ERG+ 
Sbjct: 568 ADAEAF-----IRD------------------SAFHDDAVVWRSLLASCRIHGDMERGQL 604

Query: 480 IHGYILRHGISADRNVANAIV-DMYVKCGVLVLARSLFDMIPAKDL-----ISWTIMIAG 533
           +   I+   +    + +  I+ +MY+  G L LA    D++  + +     +SW  + + 
Sbjct: 605 VADQIM--DLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRS- 661

Query: 534 YGMHGF 539
            G+H F
Sbjct: 662 -GVHSF 666



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 191/382 (50%), Gaps = 26/382 (6%)

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK--CGDLDGAIRVFEKMGERSVVSW 336
           +C AL    AVHA   +A  +  +   N+LL  Y +   G    A R+ ++M  R+ VS+
Sbjct: 11  SCTALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSY 70

Query: 337 TSMIAGYAREGVFDGAIRLF-RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
             +I+ Y+R G+   A+  F R     G+  D +   + L AC+    L  GK VH    
Sbjct: 71  NLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTV 130

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LD 445
            + + + +++SN+L  MYA CG M +A  VF+     D VSWN+++            L 
Sbjct: 131 LDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLK 190

Query: 446 LFVAMLQN-FEPDGVTMACILPACASLAALER--GREIHGYILRHGISADRNVANAIVDM 502
           +F  M  +    +   +  I+  CAS + + R     +HG +++ G+ AD  +A+A++DM
Sbjct: 191 VFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDM 250

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC------DAIATFNDMRQAGIE 556
           Y K G L  A +LF  +P  ++I +  MIAG+             +A++ +++M+  G++
Sbjct: 251 YAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQ 310

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           P E +F S+L AC+ +G    G +    ++++  + +  +   + ++DL S +G + + Y
Sbjct: 311 PSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIG--SALIDLYSDSGCMEDGY 368

Query: 616 RFIEMMPVAPDATIWGSLLCGC 637
           R    +P   D   W S++ GC
Sbjct: 369 RCFRSLP-KQDIVTWTSMISGC 389



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 159/378 (42%), Gaps = 46/378 (12%)

Query: 66  YNAEIGRFCE----VGN-LEKAMEVLYSSEKSK---IDTKTYCSILQLCADLKSLEDGKK 117
           +NA I  FC     VG  + +    LYS  +S+       T+ SIL+ C        GK+
Sbjct: 275 FNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQ 334

Query: 118 VHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
           +H  + +     DD  +GS L+ ++   G +++G R F  +    +  W  ++    +  
Sbjct: 335 IHGQVLKHSFH-DDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNE 393

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVL---------------KCLAV---------VGN 213
            F+++L LF++    G+  D +T S V+               +CLA+         +GN
Sbjct: 394 LFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGN 453

Query: 214 --------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                   S  V    + F E+  RDVVSW+ +IS +  +G A   L +F EM+N     
Sbjct: 454 SFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAP 513

Query: 266 DLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDL-DGAIR 323
           +  T + VL+ C++ G +  G R       +   S  I     ++D+  + G L D    
Sbjct: 514 NEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAF 573

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD-G 382
           + +       V W S++A     G  +   +L    + + +EP   A   IL+    D G
Sbjct: 574 IRDSAFHDDAVVWRSLLASCRIHGDMERG-QLVADQIMD-LEPTSSASYVILYNMYLDAG 631

Query: 383 LLEIGKDVHDYIKENDMQ 400
            L +     D +KE  ++
Sbjct: 632 ELSLASKTRDLMKERGVK 649


>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
 gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 207/507 (40%), Positives = 306/507 (60%), Gaps = 42/507 (8%)

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           PD +  + +L AC     +  GK +H   ++    S+L++ N ++++Y  CG M DA  +
Sbjct: 8   PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLL 67

Query: 426 FNQMPVKDIVSWNTMIG-----------------------------------------AL 444
           F +MP +D V+WN +I                                          A+
Sbjct: 68  FEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAI 127

Query: 445 DLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           DLF+ +  +   P+ VT+  +L ACA L  L+ GR +H Y  + G   + +V N ++DMY
Sbjct: 128 DLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMY 187

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
           VKCG L  AR +F  +  + ++SW+ MIAG  MHG   +A+  F++M + G++P+ V+FI
Sbjct: 188 VKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFI 247

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            +L+ACSH GL+DEG RFF  M  +  + P++EHY C+VDL SR G L EA+ FI  MP+
Sbjct: 248 GLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPI 307

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            P+  +WG+LL GC++H  + LAE+  +H+ EL+P N GYYV+++N+YAEAE+WE+  ++
Sbjct: 308 KPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARV 367

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R+ +  RG+KK  G S I + G V+ FVAG  +HP A+ I  +  +L ++MKR GY PKT
Sbjct: 368 RKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAPKT 427

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              L++ +E EKE  L  HSEKLA+ FG++  P G  IR+ KNLRVC DCH   K +S  
Sbjct: 428 SVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKIISGI 487

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             REI++RD NRFH F+DG+CSCR FW
Sbjct: 488 VSREIIVRDRNRFHCFRDGQCSCRDFW 514



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 181/351 (51%), Gaps = 41/351 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           DT T   +L+ C  L  + +GK +H +  + G        GS L                
Sbjct: 9   DTFTCSFVLKACLKLSDVVNGKTIHGLFQKLG-------FGSNL---------------- 45

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
                    F+ N++++ Y   G   +++ LF+KM       D+ T++ V+  LA  G+ 
Sbjct: 46  ---------FLQNMILNLYGLCGEMGDAMLLFEKMPQ----RDAVTWNIVIAQLAKRGD- 91

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             +  A+  F  + +++V SW  MISG++  G   + +++F ++ +     +  T+V+VL
Sbjct: 92  --IDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVL 149

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           + CA+ G L  GR VH ++ K+ F + +   NTL+DMY KCG L+ A RVF +M ER+VV
Sbjct: 150 AACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVV 209

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           SW++MIAG A  G  + A+ LF  M++ G++P+      +LHAC+  GL++ G+     +
Sbjct: 210 SWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASM 269

Query: 395 KEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
             +  +   +     ++D++++ G + +A      MP+K + V W  ++G 
Sbjct: 270 TADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGG 320



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 171/332 (51%), Gaps = 25/332 (7%)

Query: 222 KLFDELSDRDVVSW---NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           +LFD L D    S+    C+    + NG    GL  F++ L  G N+ L  M+  L G  
Sbjct: 2   RLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGL--FQK-LGFGSNLFLQNMILNLYGL- 57

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
            CG +  G A+  F  +    ++    N ++   +K GD+DGA   F +M  ++V SWTS
Sbjct: 58  -CGEM--GDAMLLF--EKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTS 112

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           MI+G+ + G  + AI LF  +  E + P+   + S+L ACA  G L++G+ VH+Y  ++ 
Sbjct: 113 MISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSG 172

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFV 448
            + +++V N L+DMY KCG + +A  VF +M  + +VSW+ MI           AL LF 
Sbjct: 173 FKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFS 232

Query: 449 AMLQ-NFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKC 506
            M++   +P+GVT   +L AC+ +  ++ GR     +   +G+         +VD++ + 
Sbjct: 233 EMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRA 292

Query: 507 GVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           G+L  A      +P K + + W  ++ G  +H
Sbjct: 293 GLLEEAHEFILSMPIKPNGVVWGALLGGCKVH 324



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 98/203 (48%), Gaps = 11/203 (5%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
            +++ + I  F + G   +A+++    E   +  +  T  S+L  CADL  L+ G+ VH 
Sbjct: 107 VRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHE 166

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              +SG   +  V  + L+ M+V CG L+  RRVF +++   V  W+ ++   +  G  +
Sbjct: 167 YSTKSGFKRNVHVCNT-LIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAE 225

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVS----W 235
           E+L LF +M  LG+  +  TF  +L   + +G    + +  + F  ++ D  V+     +
Sbjct: 226 EALCLFSEMIKLGVKPNGVTFIGLLHACSHMG---LIDEGRRFFASMTADYGVIPQIEHY 282

Query: 236 NCMISGYIANGVAEKGLEVFKEM 258
            C++  +   G+ E+  E    M
Sbjct: 283 GCVVDLFSRAGLLEEAHEFILSM 305


>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Cucumis sativus]
 gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Cucumis sativus]
          Length = 606

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 201/530 (37%), Positives = 320/530 (60%), Gaps = 12/530 (2%)

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           S    +D A  +F+++ E +   + +MI GY     F+ AI L+  M++  +EPD +   
Sbjct: 77  SDWNSMDYACSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYP 136

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
            +L ACA   +++ G  +H ++ +  ++  +YV N+L++MY KC  +  + ++F +M  K
Sbjct: 137 VVLKACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQK 196

Query: 433 DIVSWNTMIGA----------LDLFVAMLQN--FEPDGVTMACILPACASLAALERGREI 480
            + SW+ +I A          L LF  M +   +  +   +  +L AC  L A   GR  
Sbjct: 197 SVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCA 256

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           HG +L++    +  V  +++DMYVKCG L     LF  +  K+ +S++++I+G G+HG+G
Sbjct: 257 HGSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYG 316

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
             A+  F++M + G+EPD+V+++SVL ACSHSGLVDEG   F+ M++E  IEP ++HY C
Sbjct: 317 RQALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGC 376

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           MVDL  R G L EA++ ++ MP+  +  +W SLL  C++H  +KL E  AE++F L   N
Sbjct: 377 MVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHN 436

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
              Y++L+N+YA A++WE   K+R K+  RGL + PG S +E+K KV  FV+   S+  +
Sbjct: 437 PSDYLVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKS 496

Query: 721 KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
             I  ++ ++  +++ EGY P T   +++ DE EK   L GHS+KLA+AF +++   G  
Sbjct: 497 GNIYKMIHQMEWQLRFEGYMPDTSQVMLDVDEEEKGERLKGHSQKLAIAFALIHTSQGSA 556

Query: 781 IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           IR+ +NLR+C DCH   K +S    REI +RD NRFHHFKDG CSCR +W
Sbjct: 557 IRIIRNLRMCNDCHSYTKLVSMIYEREITVRDRNRFHHFKDGNCSCRDYW 606



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 191/407 (46%), Gaps = 20/407 (4%)

Query: 181 ESLYLFKKMQ----SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWN 236
           +SL  FK++       G+  DS+  S VL   A+  +   +  A  +F +L +     +N
Sbjct: 43  KSLEEFKQVHVQILKFGLFLDSFCSSSVLATCAL-SDWNSMDYACSIFQQLDEPTTFDFN 101

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            MI GY+ N   E  + ++ +ML      D  T   VL  CA    +  G  +H    K 
Sbjct: 102 TMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKL 161

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
               ++   N+L++MY KC D++ +  +F +M ++SV SW+++IA +A   ++   + LF
Sbjct: 162 GLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALF 221

Query: 357 RGMVREGI-EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
             M REG    +   + ++L AC   G   +G+  H  + +N  + ++ V  +LMDMY K
Sbjct: 222 EDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYVK 281

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACI 464
           CGS+     +F  M  K+ +S++ +I           AL +F  M++   EPD VT   +
Sbjct: 282 CGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSV 341

Query: 465 LPACASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK- 522
           L AC+    ++ G ++   +   + I         +VD+  + G+L  A  L   +P K 
Sbjct: 342 LSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKA 401

Query: 523 DLISWTIMIAGYGMH-GFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           + + W  +++   +H       IA  N  R +   P +   +S +YA
Sbjct: 402 NDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYA 448



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 187/391 (47%), Gaps = 47/391 (12%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG-----D 147
           K   + Y  +++ C   KSLE+ K+VH  I + G+ +D     S L     TC       
Sbjct: 29  KQKEQEYLCLVKKC---KSLEEFKQVHVQILKFGLFLDSFCSSSVLA----TCALSDWNS 81

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           +     +F ++D    F +N ++  Y    NF+ ++YL+  M    +  D++T+  VLK 
Sbjct: 82  MDYACSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKA 141

Query: 208 ---LAVV-----------------------------GNSRRVKDAHKLFDELSDRDVVSW 235
              LAV+                             G  R ++ +  +F  +  + V SW
Sbjct: 142 CARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASW 201

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           + +I+ + +  +  + L +F++M   G +  + + +V VLS C + GA   GR  H   L
Sbjct: 202 SAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLL 261

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
           K      ++   +L+DMY KCG L   + +F+ M  ++ +S++ +I+G    G    A++
Sbjct: 262 KNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQ 321

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMY 413
           +F  MV EG+EPD     S+L AC+  GL++ G D+ D +K E  ++ ++     ++D+ 
Sbjct: 322 IFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLK 381

Query: 414 AKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            + G + +A  +   MP+K + V W +++ A
Sbjct: 382 GRAGLLEEAFQLVQSMPIKANDVLWRSLLSA 412



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 87/411 (21%), Positives = 169/411 (41%), Gaps = 74/411 (18%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVH 119
           T ++N  I  +    N E A+  LY+     + + D  TY  +L+ CA L  +++G ++H
Sbjct: 97  TFDFNTMIRGYVNNMNFENAI-YLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIH 155

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
             + + G+  DD  + + L+ M+  C D++    +F +++   V  W+ ++  ++    +
Sbjct: 156 GHVFKLGLE-DDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMW 214

Query: 180 KESLYLFKKMQSLGI-AADSYTFSCVLKCLAVVGNSRRVKDAHK---------------- 222
            E L LF+ M   G   A+      VL     +G     + AH                 
Sbjct: 215 WECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTS 274

Query: 223 ----------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                           LF  ++ ++ +S++ +ISG   +G   + L++F EM+  G   D
Sbjct: 275 LMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPD 334

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             T V+VLS C++ G +  G                      LD++ K          FE
Sbjct: 335 DVTYVSVLSACSHSGLVDEG----------------------LDLFDKMK--------FE 364

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
              E ++  +  M+    R G+ + A +L + M    I+ +     S+L AC     L++
Sbjct: 365 YRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSM---PIKANDVLWRSLLSACKVHDNLKL 421

Query: 387 GK-DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
           G+    +  + +    S Y+   L +MYA+     +A  +  +M  + ++ 
Sbjct: 422 GEIAAENLFRLSSHNPSDYL--VLSNMYARAQQWENAAKIRTKMINRGLIQ 470


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/558 (37%), Positives = 332/558 (59%), Gaps = 14/558 (2%)

Query: 287 RAVHAFALK-ACFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           + +HAF+++     +   FN  L+  + S    +  A ++F ++   ++ +W +MI G+A
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111

Query: 345 REGVFDGAIRLFRGM-VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
                  A+ LF  M     I PD +    +  A A    + +G+ +H  +  N   S  
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLR 171

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQ 452
           +V N+L+ MY+  G    A  VF  M  +D V+WN++I           AL L+  M  +
Sbjct: 172 FVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSE 231

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
             EPDG TM  +L AC  L AL  G  +H Y+++ G+  +++ +NA++D+Y KCG    A
Sbjct: 232 GVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDA 291

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           + +FD +  + ++SWT +I G  ++G G +A+  F ++ + G++P E++F+ VLYACSH 
Sbjct: 292 QKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHC 351

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
           G++DEG+ +F  M+ E  I P++EH+ CMVDLL R G + +AY +I  MPV P+A IW +
Sbjct: 352 GMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRT 411

Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           LL  C IH  ++L E     +  LE  ++G +VLL+N+YA   +W +V+ +R+ +  +G+
Sbjct: 412 LLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGV 471

Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 752
           KK PG S +E+K +V  F+ G  SHP +++  ++L ++   +K EGY P+T   L + +E
Sbjct: 472 KKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEE 531

Query: 753 MEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRD 812
            EKE AL  H+EK+A+AF ++N P G  IR+ KNLRVC DCH   K +SK   REI++RD
Sbjct: 532 EEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRD 591

Query: 813 SNRFHHFKDGRCSCRGFW 830
            +RFHHFKDG CSC+ +W
Sbjct: 592 RSRFHHFKDGSCSCKDYW 609



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 197/379 (51%), Gaps = 38/379 (10%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT-CGDLKEGRRVFNKID 159
           S++QLC   +S    K++H+     G+   +      L+F  V+    +    ++FN+I 
Sbjct: 39  SLVQLCGSSQS--KLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQ 96

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLA--------- 209
              +F WN ++  ++++ N   ++ LF +M +   I  D++TF  + K +A         
Sbjct: 97  APNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGE 156

Query: 210 -----VVGNS----RRVKD--------------AHKLFDELSDRDVVSWNCMISGYIANG 246
                VV N     R V++              A+++F+ +S RD V+WN +I+G+  NG
Sbjct: 157 GIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNG 216

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
           +  + L +++EM + G   D  TMV++LS C   GAL  G  VH + +K    +    +N
Sbjct: 217 MPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASN 276

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
            LLD+YSKCG+   A +VF++M ERSVVSWTS+I G A  G+ + A++LF  + R+G++P
Sbjct: 277 ALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKP 336

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESV 425
                  +L+AC+  G+L+ G +    +KE   +   +     ++D+  + G + DA   
Sbjct: 337 SEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDY 396

Query: 426 FNQMPV-KDIVSWNTMIGA 443
              MPV  + V W T++GA
Sbjct: 397 IRNMPVPPNAVIWRTLLGA 415



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 171/348 (49%), Gaps = 20/348 (5%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-D 266
            A+V  S  +  A ++F+++   ++ +WN MI G+  +      +E+F +M      + D
Sbjct: 76  FALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPD 135

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
             T   +    A    +  G  +H+  ++  F       N+L+ MYS  G  + A +VFE
Sbjct: 136 THTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFE 195

Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
            M  R  V+W S+I G+A  G+ + A+ L+R M  EG+EPD + + S+L AC   G L +
Sbjct: 196 IMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALAL 255

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----- 441
           G+ VH Y+ +  +  + + SNAL+D+Y+KCG+  DA+ VF++M  + +VSW ++I     
Sbjct: 256 GERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAV 315

Query: 442 -----GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR----HGISA 491
                 AL LF  +  Q  +P  +T   +L AC+    L+ G     Y  R    +GI  
Sbjct: 316 NGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEG---FNYFRRMKEEYGILP 372

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
                  +VD+  + G +  A      +P   + + W  ++    +HG
Sbjct: 373 RIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHG 420



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 161/408 (39%), Gaps = 76/408 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
            +N  I  F E  N   A+E+   ++++     DT T+  + +  A L  +  G+ +HS+
Sbjct: 102 TWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSV 161

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +  +G      V  S LV M+   G  +   +VF  +       WN +++ ++  G   E
Sbjct: 162 VVRNGFDSLRFVQNS-LVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNE 220

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKC---LAVVGNSRRV--------------------- 217
           +L L+++M S G+  D +T   +L     L  +    RV                     
Sbjct: 221 ALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLD 280

Query: 218 --------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                   +DA K+FDE+ +R VVSW  +I G   NG+  + L++F E+   G      T
Sbjct: 281 LYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEIT 340

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            V VL  C++CG L  G                       + + +  +  G +   E  G
Sbjct: 341 FVGVLYACSHCGMLDEG----------------------FNYFRRMKEEYGILPRIEHHG 378

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
                    M+    R G    A    R M    + P+     ++L AC   G LE+G+ 
Sbjct: 379 --------CMVDLLCRAGKVGDAYDYIRNM---PVPPNAVIWRTLLGACTIHGHLELGEV 427

Query: 390 VHDYIKENDMQSS---LYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
               I+  + + S   + +SN    +YA      D ++V   M +K +
Sbjct: 428 ARAEIQRLEQRHSGDFVLLSN----LYASERRWLDVQNVRKIMLMKGV 471


>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
 gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
          Length = 504

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 209/504 (41%), Positives = 308/504 (61%), Gaps = 12/504 (2%)

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           M  GY++ G    A+ ++  M+   +EP  +A ++ L ACA    L +G+ VH  + ++ 
Sbjct: 1   MAIGYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSS 60

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFV 448
                 V+N L+ +Y +C    +   VF+QMP +++ SWN++I           ALD+F 
Sbjct: 61  EGPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFR 120

Query: 449 AML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            M  +      VT+  ILP CA + AL  G+EIH  I++     D  V N++VDMYVKCG
Sbjct: 121 RMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCG 180

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
           V+   R LFD + +KDL SW  M+ GY ++G+   A+  FN+M   GI PD+V+FI++L 
Sbjct: 181 VVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLS 240

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
            CSH+GL ++G + F+ M  +  + P LEHYAC+VD+L R G +  A   ++ MP+    
Sbjct: 241 GCSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSG 300

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
           +IWGSLL  CR+H+EV LAE +A  +FELEP N G YV+L+N+YA A  W+ V  +RE +
Sbjct: 301 SIWGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREMM 360

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGS-SHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
             R ++K  GCSWI++K K++ FVAGG     ++ + + +  +LR  M+  GY P T   
Sbjct: 361 QTRRIRKEAGCSWIQVKNKIHSFVAGGGFEFRNSDEYKKIWNKLREAMEEFGYIPNTDVV 420

Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
           L + +E  K + +CGHSE+LA  F +++  AG  IR+TKNLRVC DCH   K +S+   R
Sbjct: 421 LHDVNEETKAMWVCGHSERLATVFSLIHTAAGMPIRITKNLRVCVDCHSWIKIVSRVTGR 480

Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
            IVLRD+NRFHHFK+G CSC  +W
Sbjct: 481 VIVLRDTNRFHHFKEGACSCNDYW 504



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 173/363 (47%), Gaps = 20/363 (5%)

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M  GY  NG   + L V+ EML            T L  CA+   L  GR VHA  +K+ 
Sbjct: 1   MAIGYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSS 60

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
              +   NN LL +Y++C   +  ++VF++M ER+V SW S+I+G+ +E     A+ +FR
Sbjct: 61  EGPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFR 120

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M REG+      +T+IL  CA    L  GK++H  I ++  +  + V N+L+DMY KCG
Sbjct: 121 RMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCG 180

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILP 466
            +     +F+ M  KD+ SWNTM+           A+DLF  M      PD VT   +L 
Sbjct: 181 VVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLS 240

Query: 467 ACASLAALERGREI-HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
            C+     E G+++ H   +  G+S        +VDM  + G +  A  +   +P K   
Sbjct: 241 GCSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSG 300

Query: 526 S-WTIMIAGYGMHGFGCDAIATFNDMRQ-AGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           S W  ++    +H     A A  N + +     P     +S +YA  ++G+    W   N
Sbjct: 301 SIWGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYA--NAGM----WDSVN 354

Query: 584 MMR 586
           M+R
Sbjct: 355 MVR 357



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 34/308 (11%)

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----------------------- 209
           YSK G  +E+L ++ +M    +   ++ FS  LK  A                       
Sbjct: 5   YSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGPD 64

Query: 210 -VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
            VV N             +  K+FD++ +R+V SWN +ISG++      + L+VF+ M  
Sbjct: 65  QVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQR 124

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
            G      T+ T+L  CA   AL+ G+ +HA  +K+    ++   N+L+DMY KCG +D 
Sbjct: 125 EGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDY 184

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
             R+F+ M  + + SW +M+ GYA  G    A+ LF  M   GI PD     ++L  C+ 
Sbjct: 185 GRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCSH 244

Query: 381 DGLLEIGKDV-HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WN 438
            GL E G+ + H    +  +  SL     L+DM  + G +  A  V   MP+K   S W 
Sbjct: 245 AGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWG 304

Query: 439 TMIGALDL 446
           +++ +  L
Sbjct: 305 SLLNSCRL 312



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 35/276 (12%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
           + + L+ CADL+ L  G+ VH+ + +S    D  V+ + L+ ++  C    E  +VF+++
Sbjct: 33  FSTALKACADLRELWVGRGVHAQVVKSSEGPDQ-VVNNGLLRLYTQCECFNEVLKVFDQM 91

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--------- 209
               V  WN L+  + K     E+L +F++MQ  G+     T + +L   A         
Sbjct: 92  PERNVASWNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALLSGK 151

Query: 210 -----VVGNSRR------------------VKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                +V ++RR                  V    +LFD +  +D+ SWN M++GY  NG
Sbjct: 152 EIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAING 211

Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV-HAFALKACFSKEISFN 305
                +++F EM + G   D  T + +LSGC++ G    G+ + H   +    S  +   
Sbjct: 212 YMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHY 271

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMI 340
             L+DM  + G +D A+ V + M  ++  S W S++
Sbjct: 272 ACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLL 307



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 6/165 (3%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  F +   L +A++V    ++  +     T  +IL +CA + +L  GK++H+ I
Sbjct: 98  SWNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQI 157

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +S    D  VL S LV M+V CG +  GRR+F+ + +  +  WN ++  Y+  G  + +
Sbjct: 158 VKSARRPDVLVLNS-LVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVA 216

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL 227
           + LF +M S GI  D  TF  +L   +  G +   +D  KLF  +
Sbjct: 217 MDLFNEMASCGIRPDDVTFIALLSGCSHAGLT---EDGQKLFHRM 258


>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
 gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 216/599 (36%), Positives = 333/599 (55%), Gaps = 42/599 (7%)

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           LS   +C  L   + +HA  ++A    ++   + L+ +      LD A +VF ++   ++
Sbjct: 19  LSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNL 78

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
             + S I G++     D +   +    R G+ PD      ++ AC   G L++G   H  
Sbjct: 79  FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQ 138

Query: 394 IKENDMQSSLYVSNALMDMYA-------------------------------KCGSMADA 422
           I  +   S +YV N+L+ MY+                               K G +  A
Sbjct: 139 IIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSA 198

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDL-FVAMLQNFEPDGVTMACILPACASL 471
             +F++MP K++V+W+ MI           A++L F+   +    +   M  ++ +CA L
Sbjct: 199 RKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHL 258

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
            ALE G   H YILR+ ++ +  +  A+VDMY +CG +  A  +FD +P +D +SWT +I
Sbjct: 259 GALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLI 318

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           AG+ MHG+   A+  F+ M +AG+ P E++F +VL ACSH GLV+ G   F  M+ +  I
Sbjct: 319 AGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRI 378

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
           EP+LEHY CMVDLL R G L+EA +F+  MP+ P+A IWG+LL  CRIH   ++AE+  +
Sbjct: 379 EPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGK 438

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            + EL+P+++GYYVLL+N+YA   KWE V+ +R+ +  RG+ K PG +  E+ GKV+ F 
Sbjct: 439 TLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFT 498

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFG 771
            G  +HP  ++IE + + +  +++  GY      AL + DE EKE  +  HSEKLA+A+ 
Sbjct: 499 IGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYA 558

Query: 772 ILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           I+       IR+ KNLRVC DCH   K +SK   RE+++RD NRFHHFK G CSC  +W
Sbjct: 559 IMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 192/382 (50%), Gaps = 43/382 (11%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           YN+ I  F    + +K+      S+++ +  D  TY  +++ C    SL+ G + H  I 
Sbjct: 81  YNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQII 140

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
             G   D                                V++ N L+  YS  G+ K + 
Sbjct: 141 RHGFDSD--------------------------------VYVQNSLVTMYSTLGDIKSAS 168

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
           Y+F+++  L + + +   +  +K       S  V  A KLFD++ ++++V+W+ MISGY 
Sbjct: 169 YVFRRISCLDVVSWTSMVAGYIK-------SGDVTSARKLFDKMPEKNLVTWSVMISGYA 221

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            N   +K +E++  + + G + +   MV+V++ CA+ GAL  G   H + L+   +  + 
Sbjct: 222 KNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLI 281

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               L+DMY++CG +D AI VF+++  R  +SWT++IAG+A  G  + A+  F  M + G
Sbjct: 282 LGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAG 341

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADA 422
           + P     T++L AC+  GL+E G ++ + +K +  ++  L     ++D+  + G +A+A
Sbjct: 342 LTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEA 401

Query: 423 ESVFNQMPVK-DIVSWNTMIGA 443
           E   N+MP+K +   W  ++GA
Sbjct: 402 EKFVNEMPMKPNAPIWGALLGA 423



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 169/369 (45%), Gaps = 46/369 (12%)

Query: 197 DSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
           D +  SC++   ++  N   +  A ++F ++ + ++  +N  I G+  +   +K    + 
Sbjct: 46  DVFAASCLI---SISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYV 102

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
           +    G   D  T   ++  C   G+L  G   H   ++  F  ++   N+L+ MYS  G
Sbjct: 103 QSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLG 162

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREG----------------------------- 347
           D+  A  VF ++    VVSWTSM+AGY + G                             
Sbjct: 163 DIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAK 222

Query: 348 --VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
              FD AI L+  +  EG+  +   + S++ +CA  G LE+G+  HDYI  N M  +L +
Sbjct: 223 NSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLIL 282

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NF 454
             AL+DMYA+CGS+  A  VF+Q+P +D +SW T+I           AL+ F  M +   
Sbjct: 283 GTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGL 342

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLAR 513
            P  +T   +L AC+    +ERG E+   + R + I         +VD+  + G L  A 
Sbjct: 343 TPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAE 402

Query: 514 SLFDMIPAK 522
              + +P K
Sbjct: 403 KFVNEMPMK 411


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/627 (34%), Positives = 359/627 (57%), Gaps = 15/627 (2%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V  A KLFD +  R+VVSW+ +++GY+ NG   +  E+FK+M+ +  N+       + + 
Sbjct: 73  VSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMV-VKDNI-FPNEYVIATA 130

Query: 277 CANCGALMF--GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            ++C + M+  G+  H +ALK+         N L+ +YSKC D+  AI++   +    + 
Sbjct: 131 ISSCDSQMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIF 190

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
            +  ++ G  +      A+ + + ++ EGIE +     +I   CA    + +GK VH  +
Sbjct: 191 CYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQM 250

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------L 444
            ++D+   +Y+ ++++DMY KCG++    + F+++  +++VSW ++I A          L
Sbjct: 251 LKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEAL 310

Query: 445 DLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           +LF  M +    P+  TMA +  + A L+AL  G ++H    + G+  +  V NA++ MY
Sbjct: 311 NLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMY 370

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            K G ++ A+S+F  +   ++I+W  +I G+  HG G +A++ F DM   G  P+ V+FI
Sbjct: 371 FKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFI 430

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
            V+ AC+H  LVDEG+ +FN +  +  I P LEHY C+V LLSR+G L EA  F+    +
Sbjct: 431 GVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQI 490

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
             D   W +LL  C +H       K+AE++ +LEP + G Y+LL+N++A   +W+ V ++
Sbjct: 491 NWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEI 550

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R+ +  R +KK PG SW+EI+   ++F +    HP A  I   +K L  +++  GY P  
Sbjct: 551 RKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDI 610

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
              L + ++ +K   L  HSEKLA+A+G++  P+G  I V KNLR+C DCH   K +SK 
Sbjct: 611 DNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKV 670

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
           A R IV+RD+NRFHHF++G CSC  +W
Sbjct: 671 ANRVIVVRDANRFHHFQNGCCSCGDYW 697



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 170/312 (54%), Gaps = 17/312 (5%)

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFS---KEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           + +L   A+   L FGR +HA       +    +++  N+L+++Y KC ++  A ++F+ 
Sbjct: 23  IKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDS 82

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGIEPDVYAITSILHACACDGLLEI 386
           M  R+VVSW++++AGY + G       LF+ M V++ I P+ Y I + + +C     +E 
Sbjct: 83  MPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE- 141

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
           GK  H Y  ++ ++   YV NAL+ +Y+KC  +  A  +   +P  DI  +N ++     
Sbjct: 142 GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQ 201

Query: 443 ------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                 A+D+   ++ +  E +  T   I   CASL  +  G+++H  +L+  I  D  +
Sbjct: 202 HTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYI 261

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            ++I+DMY KCG ++  R+ FD + +++++SWT +IA Y  + F  +A+  F+ M    I
Sbjct: 262 GSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCI 321

Query: 556 EPDEVSFISVLY 567
            P+E + ++VL+
Sbjct: 322 PPNEYT-MAVLF 332



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 182/411 (44%), Gaps = 56/411 (13%)

Query: 23  GKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKA 82
           G +F  Y  + L  + S  S     I  +       + C    YN  +    +  ++ +A
Sbjct: 153 GLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFC----YNLVVNGLLQHTHMAEA 208

Query: 83  MEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF 140
           ++VL    SE  + +  TY +I +LCA LK +  GK+VH+ + +S I  D   +GS ++ 
Sbjct: 209 VDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCD-VYIGSSIID 267

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+  CG++  GR  F+++ +  V  W  ++  Y +   F+E+L LF KM+   I  + YT
Sbjct: 268 MYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYT 327

Query: 201 FSCV------------------------LKCLAVVGN--------SRRVKDAHKLFDELS 228
            + +                        LK   +VGN        S  +  A  +F  ++
Sbjct: 328 MAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMT 387

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC-----GAL 283
             ++++WN +I+G+  +G+ ++ L +F++M+  G   +  T + V+  CA+      G  
Sbjct: 388 CCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFY 447

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAG 342
            F   +  F +       +     ++ + S+ G LD A            VVSW +++  
Sbjct: 448 YFNHLMKQFRI----VPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNA 503

Query: 343 YAREGVFDGAIRLFRGMVREGIEP-DV--YAITSILHACA--CDGLLEIGK 388
                 +D   ++   +++  +EP DV  Y + S +HA     D ++EI K
Sbjct: 504 CYVHKHYDKGRKIAEYLLQ--LEPRDVGTYILLSNMHARVRRWDHVVEIRK 552



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 4/117 (3%)

Query: 464 ILPACASLAALERGREIHGY--ILRHGISADR-NVANAIVDMYVKCGVLVLARSLFDMIP 520
           +L   A    L+ GR IH +  I  H     + N  N+++++YVKC  + +AR LFD +P
Sbjct: 25  LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84

Query: 521 AKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVD 576
            ++++SW+ ++AGY  +G   +    F  M  +  I P+E    + + +C     V+
Sbjct: 85  RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE 141


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/726 (32%), Positives = 385/726 (53%), Gaps = 50/726 (6%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           N+ I   C+  +  +A++      K+   +++  TY +++  C +++SL+ GK++H  I 
Sbjct: 48  NSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHIL 107

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +S     D VL + ++ M+  CG LK+ R+ F+ +    V  W +++  YS+ G   +++
Sbjct: 108 KSNCQ-PDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAI 166

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR---------------------------- 215
            ++ +M   G   D  TF  ++K   + G+                              
Sbjct: 167 IMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMY 226

Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATM 270
               ++  A  +F  +S +D++SW  MI+G+   G   + L +F++M   G +  +    
Sbjct: 227 TKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIF 286

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +V S C +     FGR +     K    + +    +L DMY+K G L  A R F ++  
Sbjct: 287 GSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIES 346

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
             +VSW ++IA  A   V + AI  F  M+  G+ PD     ++L AC     L  G  +
Sbjct: 347 PDLVSWNAIIAALANSDV-NEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQI 405

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA------ 443
           H YI +  +     V N+L+ MY KC ++ DA +VF  +    ++VSWN ++ A      
Sbjct: 406 HSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQ 465

Query: 444 ----LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
                 LF  ML    +PD +T+  IL  CA L +LE G ++H + ++ G+  D +V+N 
Sbjct: 466 PGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNR 525

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           ++DMY KCG+L  AR +FD     D++SW+ +I GY   G G +A+  F  MR  G++P+
Sbjct: 526 LIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPN 585

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
           EV+++ VL ACSH GLV+EGW  +N M  E  I P  EH +CMVDLL+R G L EA  FI
Sbjct: 586 EVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFI 645

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           +     PD T+W +LL  C+ H  V +AE+ AE++ +L+P N+   VLL+N++A A  W+
Sbjct: 646 KKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWK 705

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           EV +LR  + + G++K PG SWIE+K ++++F +  SSHP    I ++L+ L L+M  +G
Sbjct: 706 EVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLWLQMLDDG 765

Query: 739 YFPKTR 744
           Y P  R
Sbjct: 766 YDPCQR 771



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 224/462 (48%), Gaps = 31/462 (6%)

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFK-EMLNLGFNVDLATMVTVLSGCANCGALM 284
           ELS    ++  C    Y       + L+ F   + N    ++ +T V ++  C N  +L 
Sbjct: 44  ELSTNSYINLMCKQQHY------REALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLK 97

Query: 285 FGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
           +G+ +H   LK+    ++   N +L+MY KCG L  A + F+ M  RSVVSWT MI+GY+
Sbjct: 98  YGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYS 157

Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
           + G  + AI ++  M+R G  PD     SI+ AC   G +++G  +H ++ ++     L 
Sbjct: 158 QNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLI 217

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN- 453
             NAL+ MY K G +A A  VF  +  KD++SW +MI           AL LF  M +  
Sbjct: 218 AQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQG 277

Query: 454 -FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
            ++P+      +  AC SL   E GR+I G   + G+  +     ++ DMY K G L  A
Sbjct: 278 VYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSA 337

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
           +  F  I + DL+SW  +IA         +AI  F  M   G+ PD+++F+++L AC   
Sbjct: 338 KRAFYQIESPDLVSWNAIIAALANSDVN-EAIYFFCQMIHMGLMPDDITFLNLLCACGSP 396

Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYAC----MVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
             +++G +  + +     I+  L+  A     ++ + ++  NL +A+   + +    +  
Sbjct: 397 MTLNQGMQIHSYI-----IKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLV 451

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVF--ELEPDNTGYYVLLA 668
            W ++L  C  H +   A ++ + +   E +PDN     +L 
Sbjct: 452 SWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILG 493


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/729 (33%), Positives = 385/729 (52%), Gaps = 56/729 (7%)

Query: 58  TLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKK 117
           T +CK K +N  I          KA E L       +   TY  ++  C+ L+SLE GKK
Sbjct: 35  TSLCKQKLFNEAI----------KAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKK 84

Query: 118 VHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
           +H  + +S     D  L + ++ M+  C  LK+ ++VF+ +    V  W  ++  YS+ G
Sbjct: 85  IHDHMLKSK-SHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNG 143

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN------------------------ 213
               +L  + +M   G+  D +TF  ++K  + +G+                        
Sbjct: 144 QGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQN 203

Query: 214 --------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                   S  + DA  +F  ++ RD++SW  MI+G+   G   + L  FKEML+ G  +
Sbjct: 204 ALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYL 263

Query: 266 DLATMV-TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
               +  +V S C++     +GR +H  ++K    +++    +L DMY+KCG L  A  V
Sbjct: 264 PNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVV 323

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F ++G   +V+W ++IAG+A  G    AI  F  M  +G+ PD   + S+L AC     L
Sbjct: 324 FYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSEL 383

Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
             G  VH YI +  +   + V N L+ MYAKC  + DA   F +M    D+VSWN ++ A
Sbjct: 384 YQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTA 443

Query: 444 L-------DLFVAM----LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                   ++F  +    +    PD +T+  +L A A   ++E G ++H Y L+ G++ D
Sbjct: 444 CMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCD 503

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
            +V N ++D+Y KCG L  A  +FD +   D++SW+ +I GY   G+G +A+  F  MR+
Sbjct: 504 TSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRR 563

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
             ++P+ V+F+ VL ACSH GLV+EGW+ +  M  E  I P  EH +CMVDLL+R G L+
Sbjct: 564 LDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLN 623

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
           EA  FI  M   PD  +W +LL  C+ H  V + ++ AE++ +++P N+  +VLL N+YA
Sbjct: 624 EAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYA 683

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
               WE+V +LR  + +RG++K PG SWIE+K ++++F    S HP   KI ++L+ L L
Sbjct: 684 SKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEELLL 743

Query: 733 EMKREGYFP 741
           +M   GY P
Sbjct: 744 QMLDAGYVP 752


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 247/742 (33%), Positives = 389/742 (52%), Gaps = 57/742 (7%)

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+  CG +   RR F+ +    V  W+ ++  Y++ G+  ++L LF +M   G+ A++ T
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 201 FSCVLKCLAVVG--------NSRRVKD-------------------------AHKLFDEL 227
           F  VL   A +G        + R V D                         A ++F+ +
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
             ++ V+WN MI+    +   ++   +  EM   G   +  T+V+V+  CA   ++  GR
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            VH          + +  N L+++Y KCG L  A    E +  R  +SWT+++A YAR G
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 240

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
               AI + + M  EG++ D +   ++L +C     L +G+++HD + E+ ++    +  
Sbjct: 241 HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQT 300

Query: 408 ALMDMYAKCGSMADAESVFNQM-PVKDIVSWNTMIGA----------LDLFVAM-LQNFE 455
           AL+DMY KCG+   A   F++M  V+D+  WN ++ A          L +F  M LQ   
Sbjct: 301 ALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVA 360

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA------IVDMYVKCGVL 509
           PD VT   IL ACASLAAL  GR  H  +L  G+   + VA+A      +++MY KCG L
Sbjct: 361 PDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSL 420

Query: 510 VLARSLF---DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             A++ F       A D+++W+ M+A Y   G   +A+  F  M+Q G++PD VSF+S +
Sbjct: 421 ADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAI 480

Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
             CSHSGLV E   FF  +R++  I P   H+AC+VDLLSR G + EA   +   P+   
Sbjct: 481 AGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAH 540

Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
            + W +LL  CR + +++ A +VA  +  L   +   Y LLA+V+  + KW++V+  R+ 
Sbjct: 541 HSTWMTLLSACRTYGDLERARRVAARLASLRSGSA--YSLLASVFCLSRKWDDVRNARQS 598

Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSS-HPHAKKIESLLKRLRLEMKREGYFPKTRY 745
           +  RG    PGCSWIEI  +V  F AG     P  ++I + L+RL +E+++ GY      
Sbjct: 599 LVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERLCVEIRKAGYERDPIK 658

Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
            + +  E EK+  L  HSEK+A+ FG+++ P G  +R+ KN+ VC DCHE+ K +S+ A 
Sbjct: 659 KVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVKNIGVCQDCHEVIKCISEVAD 718

Query: 806 REIVLRDSNRFHHFKDGRCSCR 827
           R I LRD   FH F  G CSC+
Sbjct: 719 RVITLRDDRSFHQFSHGSCSCK 740


>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Vitis vinifera]
          Length = 700

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/693 (34%), Positives = 354/693 (51%), Gaps = 96/693 (13%)

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           V SWN +ISG + NG  E  L++F  ML    + ++ T+ ++L  C    AL  G+A+HA
Sbjct: 10  VNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHA 69

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA---------- 341
            ALK      +    +++DMYSKCG  D A +VF K   ++   W  MIA          
Sbjct: 70  IALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVED 129

Query: 342 -------------------------GYAREGVFDGAIRLFRGMVREGIEPDVYA------ 370
                                    G+AR G+   A  L   MV+ G++P+V +      
Sbjct: 130 ALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVVSFNVLIS 189

Query: 371 -----------------------------------------ITSILHACACDGLLEIGKD 389
                                                    IT  L ACA   L   GK+
Sbjct: 190 GFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKE 249

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
           +H Y   N  + +++VS+AL+DMYAKC  M  A  VF ++  ++ VSWN ++        
Sbjct: 250 IHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQ 309

Query: 443 ---ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN-VAN 497
              AL LF+ ML +  +P  +T   + PAC  +AA+  GR +HGY  +  +   +N +A+
Sbjct: 310 PEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIAS 369

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           A++DMY KCG ++ A+S+FD    KD+  W  MI+ + +HG   +A A F  M   GI P
Sbjct: 370 ALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELLGILP 429

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           D ++F+S+L AC+  GLV+EGW++FN M     +   LEHY CMV +L   G L EA  F
Sbjct: 430 DHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDF 489

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           I  MP  PDA +W +LL  CR+H   ++ E+ A+ +FELEPDN   Y+LL+N+Y  +  W
Sbjct: 490 IRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMW 549

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
           +  K LR  +  R L     CS++ +   +  F  G SSHP  ++I     +L  +M+  
Sbjct: 550 DFAKNLRSFMRGRKLLTIKECSYLTVGSHICTFKGGESSHPELEEILEAWDKLARKMELS 609

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           GYFP     + + +E E +   C H+EKLA+ FGI++    + + V+KN+R+C DCH  A
Sbjct: 610 GYFPLD--PVFDDEEKELDPFSCLHTEKLAICFGIISSNTYRPVHVSKNIRMCIDCHTSA 667

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           K +SK   REI ++D   +HH KDG CSC+  W
Sbjct: 668 KLISKIDGREIFVKDVCFYHHMKDGICSCQDRW 700



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 254/517 (49%), Gaps = 44/517 (8%)

Query: 57  KTLVCKTKNYNAEIGRFCEVGNLEKAMEV----LYSSEKSKIDTKTYCSILQLCADLKSL 112
           + L     ++N  I    + G LE A+++    L+  E   I   T  SIL  C  LK+L
Sbjct: 4   RGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNI--ITIASILPACTGLKAL 61

Query: 113 EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHE 172
             GK +H+I  + GIV +  V GS ++ M+  CG      +VF K +N    +WN ++  
Sbjct: 62  RLGKAIHAIALKHGIVGNVYVEGS-VIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAA 120

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD--- 229
           Y   G  +++L L + MQ  G   D  T++ +L   A  G   +   A +L  E+     
Sbjct: 121 YVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQ---AFELLSEMVQMGL 177

Query: 230 -RDVVSWNCMISGYIANGVAEKGLEVFK------------EMLNLGFNVDLATMVTVLSG 276
             +VVS+N +ISG+  +G++ + L+VF+            E+LNL    +  T+   L  
Sbjct: 178 KPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPA 237

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA+      G+ +H + L+  F   I  ++ L+DMY+KC D+D A +VF ++  R+ VSW
Sbjct: 238 CADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSW 297

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            +++AGY      + A++LF  M+ EG++P       +  AC     +  G+ +H Y  +
Sbjct: 298 NALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAK 357

Query: 397 ---NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD-------- 445
              ++++++  +++AL+DMYAKCGS+ DA+SVF+    KD+  WN MI A          
Sbjct: 358 CQLDELKNA--IASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNA 415

Query: 446 --LFVAM-LQNFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANAIVD 501
             +FV M L    PD +T   +L ACA    +E G +  +   + +G++A       +V 
Sbjct: 416 FAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVG 475

Query: 502 MYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
           +    G+L  A      +P   D   W  ++    +H
Sbjct: 476 ILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVH 512



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 160/355 (45%), Gaps = 34/355 (9%)

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           E+  + +V SW  +I+G  + G  + A+ +F  M+    +P++  I SIL AC     L 
Sbjct: 3   ERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALR 62

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
           +GK +H    ++ +  ++YV  +++DMY+KCGS   AE VF +   K+   WN MI    
Sbjct: 63  LGKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYV 122

Query: 443 -------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  AL L  +M ++ ++PD +T   IL   A      +  E+   +++ G+  +  
Sbjct: 123 NEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVV 182

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
             N ++  + + G+   A  +F ++ +                  GC+     N++    
Sbjct: 183 SFNVLISGFQQSGLSYEALKVFRIMQSP---------------SDGCNP----NEVLNLS 223

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           + P+ ++    L AC+   L  +G +  +        EP +   + +VD+ ++  ++  A
Sbjct: 224 MRPNPITITGALPACADLNLWCQG-KEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSA 282

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV-AEHVFE-LEPDNTGYYVLL 667
            +    +    +   W +L+ G   + + + A K+  E + E L+P +  + +L 
Sbjct: 283 NKVFFRID-GRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILF 336


>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
 gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
          Length = 771

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 263/775 (33%), Positives = 412/775 (53%), Gaps = 64/775 (8%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           ++ CA  + L + K +H  I  S    D+  L + L+ +F  CGD    R VFN++    
Sbjct: 14  IRACAIGRKLHEAKILHDEIARSPHG-DNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPN 72

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
            + W+ ++  Y  +    ++  LF  M       D++T++ ++   A +    R+ DA +
Sbjct: 73  EYSWSCIIQAYVSSSRIHDARALFDSMPGF----DAFTWNIMIAAYARIN---RLDDARE 125

Query: 223 LFDEL-SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           LF  + S RDVVSW  +++GY  +   E+   +F+ M       D  T  +VL G A+ G
Sbjct: 126 LFHGMISGRDVVSWAILVAGYARHDRLEEASALFRRMPLW----DTVTCTSVLQGYAHNG 181

Query: 282 AL-----MFGR--------AVHAFALKACFSK------------EISFNNT-----LLDM 311
            L     +F R        A    A+ A + K            +I   N      LL  
Sbjct: 182 HLAEAQELFDRIGGAGDRDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLT 241

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y++ G LD A + F++M +R  +++T+M A  + +G   GA    R M+R     DV A 
Sbjct: 242 YAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGELRGA----REMLRYLSAVDVIAW 297

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            ++L   +  G L+  + +   ++   + +++ V+  L+++Y KCG + DA  V + MPV
Sbjct: 298 NALLEGYSRTGDLDEVRRLFSAMEHRTVATTV-VAGTLVNLYGKCGRVDDARRVLDAMPV 356

Query: 432 KDIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREI 480
           +  VSW  MI A          ++LF  M L+  EP  +T+  ++ +CA L  L  G+ I
Sbjct: 357 RTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRI 416

Query: 481 HGYILRHGI-SADRNVANAIVDMYVKCGVLVLARSLFDMIP--AKDLISWTIMIAGYGMH 537
           H  I    + S    + NA++ MY KCG L LAR +F+ +P   + +++WT MI  Y  +
Sbjct: 417 HARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQN 476

Query: 538 GFGCDAIATFNDMR-QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           G G +AI  F +M    G EP+ V+F+SVL ACSH G +++ W  F  M  +  + P  +
Sbjct: 477 GVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGD 536

Query: 597 HYACMVDLLSRTGNLSEAYRFI-EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
           HY C+VDLL R G L EA + +        D   W + L  C+++ +++ +++ A+ V E
Sbjct: 537 HYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSE 596

Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
           LEP+N    VLL+NVYA   +  +V ++R ++   G+KK  G SWIEI  +V+ F+    
Sbjct: 597 LEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDV 656

Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNL 775
           SHP   +I S L+RL  E+K  GY P T+  L + DE +K   L  HSE+LAMA GI++ 
Sbjct: 657 SHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGIIST 716

Query: 776 PAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           P G T+RV KNLRVC DCH   KF+S+   R+I++RD++RFHHFKDG CSC  +W
Sbjct: 717 PPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 103/250 (41%), Gaps = 45/250 (18%)

Query: 50  PISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADL 109
           P+  S+S T +      N   G   E  NL + M+ L  +E S I   T  S++  CA L
Sbjct: 355 PVRTSVSWTAMIAAYAQN---GNAAEAINLFQCMD-LEGAEPSDI---TLISVVDSCAVL 407

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID--NGKVFIWN 167
            +L  GK++H+ I  S +     +L + ++ M+  CG+L+  R VF  +      V  W 
Sbjct: 408 GTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWT 467

Query: 168 LLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYTFSCVLK-------------------- 206
            ++  Y++ G  +E++ LF++M    G   +  TF  VL                     
Sbjct: 468 AMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGP 527

Query: 207 ------------CLA-VVGNSRRVKDAHKLFDELSD--RDVVSWNCMISGYIANGVAEKG 251
                       CL  ++G + R+ +A KL     D   DVV W   +S    NG  E+ 
Sbjct: 528 DFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERS 587

Query: 252 LEVFKEMLNL 261
               K +  L
Sbjct: 588 QRAAKRVSEL 597


>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
 gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
          Length = 653

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/653 (35%), Positives = 343/653 (52%), Gaps = 42/653 (6%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A ++FD +  R+  SW+ ++  Y+ N + ++ LEV+KEM+    ++D  T+ +VL+ C  
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE--------- 330
              +  GR V   A +  F K++    +L+ +++KCG L+ A  VF  MG          
Sbjct: 61  LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120

Query: 331 ---------------------RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
                                + VVSW +MIA Y   G    A  LF  M   G  PD+Y
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
             +SIL ACA    LE G+ +H  I          + N L+ MY +CGS+  A   F  +
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240

Query: 430 PVKDIVSWNTMIGALDLFVA-----------MLQNFEPDGVTMACILPACASLAALERGR 478
             K++ +WNTM+ A   F             +L+ F PD  T + ++ +CASL AL  G+
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 300

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
            IH      G   D  +  A+V+MY KCG L  A+  FD I  KD++SW+ MIA    HG
Sbjct: 301 FIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHG 360

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
              +A+   + M   GI  +EV+  SVL+ACSH G + EG  +F  +  +  IE   E+ 
Sbjct: 361 HAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENT 420

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
              +DLL R G L EA   +  MP         +LL GC++H +V+  +   + +  LEP
Sbjct: 421 VGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALEP 480

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
           +N G YVLL N+YA A +W++V KLR  + ++G+K+  GCS IE + K+  F  G +S+P
Sbjct: 481 ENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNP 540

Query: 719 HAKKIESLLKRLRLEMK-REGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
              +I + L+RL   MK  EGY P TR    +  + +KE  L  HSEK+AM FG++  P 
Sbjct: 541 RNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPP 600

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G T+R+ KNLRVC DCH + K  SK   R I++RD  RFHHF+ G CSC  +W
Sbjct: 601 GSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 222/483 (45%), Gaps = 59/483 (12%)

Query: 74  CEVGN--LEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVI 129
           C V N   ++A+EV      E+  ID  T  S+L  C  L  +E+G+ V     E G   
Sbjct: 22  CYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFE- 80

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
            D V+ + L+ +F  CG L+E   VF                                  
Sbjct: 81  KDVVVATSLIHLFAKCGCLEEAESVF---------------------------------- 106

Query: 190 QSLGIAADSYTFSCVLKCLAVVGN-SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
           +S+G   D      ++   A++G     +KD+  LF  +  +DVVSWN MI+ Y   G  
Sbjct: 107 RSMGAMRD------IISVTAMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHD 160

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           +    +F  M  LG   D+ T  ++L  CA+   L  GR +H       F ++ +  N L
Sbjct: 161 KDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNL 220

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           + MY++CG L+ A R F  + ++ + +W +M+A YA+      A+ L++ M+ EG  PD 
Sbjct: 221 ISMYTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDR 280

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           +  +S++ +CA  G L  GK +H+       +  + +  AL++MYAKCGS+ADA+  F+ 
Sbjct: 281 FTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDG 340

Query: 429 MPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERG 477
           +  KD+VSW+ MI           AL+L   M LQ    + VT + +L AC+    L  G
Sbjct: 341 ISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEG 400

Query: 478 RE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYG 535
            +   G     GI  D       +D+  + G L  A  +   +P K   ++   ++ G  
Sbjct: 401 IDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCK 460

Query: 536 MHG 538
           +HG
Sbjct: 461 VHG 463



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 155/353 (43%), Gaps = 40/353 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA I  +   G+ + A  + +   +     D  T+ SIL  CA  K LEDG+ +H  I
Sbjct: 146 SWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRI 205

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G    D  + + L+ M+  CG L+  RR F  I+  ++  WN ++  Y++    K++
Sbjct: 206 TARGF-DRDFAMQNNLISMYTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDA 264

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK------------------------ 218
           L+L+K M   G   D +TFS V+   A +G  R  K                        
Sbjct: 265 LFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNM 324

Query: 219 --------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                   DA K FD +S++DVVSW+ MI+    +G AE+ LE+   M   G   +  T 
Sbjct: 325 YAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTA 384

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL--LDMYSKCGDLDGAIRVFEKM 328
            +VL  C++ G L  G   +   L   F  E    NT+  +D+  + G L  A  V   M
Sbjct: 385 SSVLHACSHGGRLYEG-IDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTM 443

Query: 329 GER-SVVSWTSMIAGYAREG-VFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
             + S V+  +++ G    G V  G     R +  E   P  Y + + ++A A
Sbjct: 444 PFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALEPENPGSYVLLNNMYAAA 496


>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
          Length = 742

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/567 (38%), Positives = 334/567 (58%), Gaps = 43/567 (7%)

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           T++    + G LD A R+  +  ER+VVSWTS+IAGY+R G    A+  F  M+ +G+ P
Sbjct: 176 TVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAP 235

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D  A+   L AC+    L++G+ +H  + +  ++ +  +  AL+DMYAKCG +A A++VF
Sbjct: 236 DEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVF 295

Query: 427 N--------------------------------QMPVKDIVSWNTMI----------GAL 444
           +                                QM  +D++++N+MI           AL
Sbjct: 296 DAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDAL 355

Query: 445 DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            LF+ M ++    D  T+  +L ACASL AL  GR +H  I +  +  D  +  A++DMY
Sbjct: 356 QLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMY 415

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
           +KCG +  A ++F  +  +D+ +WT MIAG   +G G DA+ +F  M++ G +P  V++I
Sbjct: 416 MKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYI 475

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           +VL ACSHS L+DEG   FN MR    + P++EHY CM+DLL+R+G L EA   ++ MP+
Sbjct: 476 AVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPM 535

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            P+A IWGS+L  CR+H  + LA   AEH+ +L P+    YV L N+Y ++ +W + K++
Sbjct: 536 QPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRV 595

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           R  +  RG+KK  G S I + G+V+ FVA   SHP   +I ++++ +   +K  GY P T
Sbjct: 596 RMLMEERGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEIACRLKSVGYSPVT 655

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
               ++ DE EKE AL  HSEK+A+AFG+++LP    I + KNLRVC DCH   K +S+ 
Sbjct: 656 SRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPSLPIHIVKNLRVCEDCHSAIKLVSQL 715

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
             REI++RD +RFHHF+DG CSC  FW
Sbjct: 716 WNREIIVRDRSRFHHFRDGACSCNDFW 742



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 176/344 (51%), Gaps = 42/344 (12%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG- 161
           L  C+ LK+L+ G+ +H ++ +  I + D ++ + L+ M+  CGD+ + + VF+ +  G 
Sbjct: 244 LSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVA-LIDMYAKCGDIAQAQAVFDAVGRGQ 302

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH 221
           K   WN ++  Y K G+                                      V  A 
Sbjct: 303 KPEPWNAIIDGYCKLGH--------------------------------------VDVAR 324

Query: 222 KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
            LFD++  RDV+++N MI+GYI +G     L++F +M   G   D  T+V++L+ CA+ G
Sbjct: 325 SLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLG 384

Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
           AL  GRA+HA   +    +++     LLDMY KCG +D A  VF +MGER V +WT+MIA
Sbjct: 385 ALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIA 444

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQ 400
           G A  G+   A+  F  M R+G +P      ++L AC+   LL+ G+   + ++  + + 
Sbjct: 445 GLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLH 504

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
             +     ++D+ A+ G + +A  +   MP++ + V W +++ A
Sbjct: 505 PQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSA 548



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 199/426 (46%), Gaps = 54/426 (12%)

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
           + +    + N L+H Y+  G   ++   F ++     A D+  ++ V+  L   G    +
Sbjct: 135 LPSAAPLVANPLIHMYASMGLTDDARRAFDEIP----AKDAVVWATVIGGLVRWG---LL 187

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
            +A +L  +  +R+VVSW  +I+GY   G     +  F  ML+ G   D   ++  LS C
Sbjct: 188 DEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSAC 247

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL------------------- 318
           +    L  GR +H    +       +    L+DMY+KCGD+                   
Sbjct: 248 SKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPW 307

Query: 319 -------------DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
                        D A  +F++MG R V+++ SMI GY   G    A++LF  M R G+ 
Sbjct: 308 NAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMR 367

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
            D + + S+L ACA  G L  G+ +H  I++  ++  +Y+  AL+DMY KCG + +A +V
Sbjct: 368 ADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAV 427

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAAL 474
           F++M  +D+ +W  MI           AL+ F  M ++ F+P  VT   +L AC+  + L
Sbjct: 428 FHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLL 487

Query: 475 ERGREIHGYILR--HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMI 531
           + GR +H   +R  H +         ++D+  + G+L  A  L   +P + + + W  ++
Sbjct: 488 DEGR-LHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSIL 546

Query: 532 AGYGMH 537
           +   +H
Sbjct: 547 SACRVH 552



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 76/306 (24%)

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------------------- 442
           V+N L+ MYA  G   DA   F+++P KD V W T+IG                      
Sbjct: 142 VANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERN 201

Query: 443 -------------------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHG 482
                              A+  F  ML +   PD V +   L AC+ L  L+ GR +H 
Sbjct: 202 VVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHL 261

Query: 483 YILRHGISADRNVANAIVDMYVKCGVLV-------------------------------- 510
            + +  I    N+  A++DMY KCG +                                 
Sbjct: 262 LVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVD 321

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
           +ARSLFD + A+D+I++  MI GY   G   DA+  F  MR+ G+  D  + +S+L AC+
Sbjct: 322 VARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACA 381

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
             G +  G R  +    +  +E  +     ++D+  + G + EA      M    D   W
Sbjct: 382 SLGALPHG-RALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMG-ERDVHTW 439

Query: 631 GSLLCG 636
            +++ G
Sbjct: 440 TAMIAG 445



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 136/323 (42%), Gaps = 22/323 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
            +N+ I  +   G L  A+++     +   + D  T  S+L  CA L +L  G+ +H+ I
Sbjct: 337 TFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASI 396

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            E  IV +D  LG+ L+ M++ CG + E   VF+++    V  W  ++   +  G  K++
Sbjct: 397 -EQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDA 455

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-----RDVVSWNC 237
           L  F +M+  G    S T+  VL   +   +S  + +    F+E+         V  + C
Sbjct: 456 LESFCQMKRDGFQPTSVTYIAVLTACS---HSSLLDEGRLHFNEMRSLHKLHPQVEHYGC 512

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MI     +G+ ++ + + + M       +     ++LS C     +   R      LK  
Sbjct: 513 MIDLLARSGLLDEAMHLVQTM---PMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLA 569

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
             +E +    L ++Y        A RV   M ER V       AGY+   V   A ++ +
Sbjct: 570 -PEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGV----KKTAGYSSITV---AGQVHK 621

Query: 358 GMVREGIEPDVYAITSILHACAC 380
            +  +   P    I +++   AC
Sbjct: 622 FVANDQSHPWTLEIMAMMEEIAC 644



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 54/123 (43%), Gaps = 32/123 (26%)

Query: 480 IHGYILRHGI-SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD--------------- 523
           +H   LR  + SA   VAN ++ MY   G+   AR  FD IPAKD               
Sbjct: 126 LHAACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWG 185

Query: 524 ----------------LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
                           ++SWT +IAGY   G   DA+  FN M   G+ PDEV+ I  L 
Sbjct: 186 LLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALS 245

Query: 568 ACS 570
           ACS
Sbjct: 246 ACS 248


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/722 (32%), Positives = 376/722 (52%), Gaps = 46/722 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ +  +   G   K++E+       KI  D  T+  +L+ C+ ++    G +VH + 
Sbjct: 105 SWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLA 164

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   +D V GS LV M+  C  L    R+F ++    +  W+ ++  Y +   F E 
Sbjct: 165 IQMGFE-NDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEG 223

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGNSR--- 215
           L LFK M  +G+     T++ V +  A                        ++G +    
Sbjct: 224 LKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDM 283

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R+ DA K+F+ L +    S+N +I GY       K LE+F+ +     + D  ++
Sbjct: 284 YAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISL 343

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
              L+ C+     + G  +H  A+K      I   NT+LDMY KCG L  A  +F+ M  
Sbjct: 344 SGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMER 403

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R  VSW ++IA + +       + LF  M+R  +EPD +   S++ ACA    L  G ++
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEI 463

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--------- 441
           H  I ++ M    +V +AL+DMY KCG + +AE + +++  K  VSWN++I         
Sbjct: 464 HGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQS 523

Query: 442 -GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             A   F  ML+    PD  T A +L  CA++A +E G++IH  IL+  + +D  +A+ +
Sbjct: 524 ENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTL 583

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY KCG +  +R +F+  P +D ++W+ MI  Y  HG G  AI  F +M+   ++P+ 
Sbjct: 584 VDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNH 643

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
             FISVL AC+H G VD+G  +F +M+    ++P +EHY+CMVDLL R+  ++EA + IE
Sbjct: 644 TIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIE 703

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            M    D  IW +LL  C++   V++AEK    + +L+P ++  YVLLANVYA    W E
Sbjct: 704 SMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGE 763

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V K+R  +    LKK PGCSWIE++ +V+ F+ G  +HP +++I      L  EMK  GY
Sbjct: 764 VAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGY 823

Query: 740 FP 741
            P
Sbjct: 824 VP 825



 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 185/646 (28%), Positives = 322/646 (49%), Gaps = 79/646 (12%)

Query: 98  TYCSILQLCADLKSLEDGKKVHS-------------------IICESG------IVID-- 130
           T+  ILQ C++LK+L  GK+ H+                     C+S        V D  
Sbjct: 8   TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67

Query: 131 ---DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
              D +  + ++F +   G++   + +F+ +    V  WN L+  Y   G  ++S+ +F 
Sbjct: 68  PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 188 KMQSLGIAADSYTFSCVLK---------------CLA---------VVGNS--------R 215
           +M+SL I  D  TFS VLK               CLA         V G++        +
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           ++  A ++F E+ +R++V W+ +I+GY+ N    +GL++FK+ML +G  V  +T  +V  
Sbjct: 188 KLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            CA   A   G  +H  ALK+ F+ +       LDMY+KC  +  A +VF  +      S
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQS 307

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC-DGLLEIGKDVHDYI 394
           + ++I GYAR+     A+ +F+ + R  +  D  +++  L AC+   G LE G  +H   
Sbjct: 308 YNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLE-GIQLHGLA 366

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------L 444
            +  +  ++ V+N ++DMY KCG++ +A ++F+ M  +D VSWN +I A          L
Sbjct: 367 VKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTL 426

Query: 445 DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
            LFV+ML++  EPD  T   ++ ACA   AL  G EIHG I++ G+  D  V +A+VDMY
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMY 486

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KCG+L+ A  + D +  K  +SW  +I+G+       +A   F+ M + G+ PD  ++ 
Sbjct: 487 GKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYA 546

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           +VL  C++   ++ G +    +  + N+   +   + +VD+ S+ GN+ ++    E  P 
Sbjct: 547 TVLDVCANMATIELGKQIHAQI-LKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP- 604

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAE--HVFELEPDNTGYYVLL 667
             D   W +++C    H   + A K+ E   +  ++P++T +  +L
Sbjct: 605 KRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVL 650



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 128/304 (42%), Gaps = 53/304 (17%)

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           +  + IL  C+    L  GK  H  +       ++YV+N L+  Y K  +M  A  VF++
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66

Query: 429 MPVKDIVSWNTMI-----------------------------------------GALDLF 447
           MP +D++SWNTMI                                          ++++F
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 448 VAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
           V M     P D  T + +L AC+ +     G ++H   ++ G   D    +A+VDMY KC
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
             L  A  +F  +P ++L+ W+ +IAGY  +    + +  F DM + G+   + ++ SV 
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246

Query: 567 YACS-----HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
            +C+       G    G    +   Y+  I          +D+ ++   +S+A++    +
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIG------TATLDMYAKCDRMSDAWKVFNTL 300

Query: 622 PVAP 625
           P  P
Sbjct: 301 PNPP 304


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/675 (34%), Positives = 375/675 (55%), Gaps = 38/675 (5%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC----GDLKE 150
           D  T+  +L+ C+ L+    G ++H +  + G   D  V GS L+ M+  C     DL+ 
Sbjct: 157 DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDV-VTGSALLDMYAKCCVQNDDLRG 215

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
           G  +F ++   K  +  L +H ++   +F   + +       G A    T    +KC   
Sbjct: 216 GLELFKEMQ--KAGVGALQLHGHALKTDFGTDVVI-------GTA----TLDMYMKC--- 259

Query: 211 VGNSRRVKD-AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                 + D +++LF+ L + ++ S+N +I GY  +    + L +F+ +   G  +D  +
Sbjct: 260 ----NNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVS 315

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +      CA     + G  VH  ++K+     I   N +LDMY KCG L  A  VFE+M 
Sbjct: 316 LSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMV 375

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
            R  VSW ++IA + + G  +  + LF  M++ G+EPD +   S+L ACA    L  G +
Sbjct: 376 SRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGME 435

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL--- 446
           +H+ I ++ M    +V  AL+DMY+KCG M  AE + +++  + +VSWN +I    L   
Sbjct: 436 IHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQ 495

Query: 447 -------FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
                  F  ML+   +PD  T A IL  CA+L  +E G++IH  I++  + +D  +++ 
Sbjct: 496 SEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISST 555

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +VDMY KCG +   + +F+  P +D ++W  M+ GY  HG G +A+  F  M+   ++P+
Sbjct: 556 LVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPN 615

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
             +F++VL AC H GLV++G  +F+ M     ++P+LEHY+C+VD++ R+G +S+A   I
Sbjct: 616 HATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELI 675

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           E MP   DA IW +LL  C+IH  V++AEK A  + +LEP+++  YVLL+N+YA A  W 
Sbjct: 676 EGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWN 735

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           EV KLR+ +   GLKK PGCSWIEIK +V+ F+ G  +HP +K+I   L  L  EMK  G
Sbjct: 736 EVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVG 795

Query: 739 YFPKTRYALINADEM 753
           Y P T + ++N DE+
Sbjct: 796 YMPDTDF-ILNDDEL 809



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 180/621 (28%), Positives = 301/621 (48%), Gaps = 65/621 (10%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHS--IICESGIVIDDGVLGSKLVFMFVTC 145
           S + +    KT+  I Q C+D K+L  GK+ H+  I+ E    +    + + L+ M++ C
Sbjct: 34  SYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTV---FVTNCLIQMYIKC 90

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK---------------KMQ 190
            DL    +VF+ +       WN ++  Y+  G+   +  LF                +M 
Sbjct: 91  SDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMG 150

Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVSWNCMISGY----IAN 245
            +G   D  TF+ VLK  + + +       H L  ++  D DVV+ + ++  Y    + N
Sbjct: 151 RMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQN 210

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
                GLE+FKEM   G                  GAL     +H  ALK  F  ++   
Sbjct: 211 DDLRGGLELFKEMQKAG-----------------VGALQ----LHGHALKTDFGTDVVIG 249

Query: 306 NTLLDMYSKCGDL-DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
              LDMY KC +L D + ++F  +   ++ S+ ++I GYAR      A+ +FR + + G+
Sbjct: 250 TATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGL 309

Query: 365 EPDVYAITSILHACAC-DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
             D  +++    ACA   G LE G  VH    ++  QS++ V+NA++DMY KCG++ +A 
Sbjct: 310 GLDEVSLSGAXRACAVIKGDLE-GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEAC 368

Query: 424 SVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACASLA 472
            VF +M  +D VSWN +I A          L LFV MLQ+  EPD  T   +L ACA   
Sbjct: 369 LVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQ 428

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           AL  G EIH  I++  +  D  V  A++DMY KCG++  A  L D +  + ++SW  +I+
Sbjct: 429 ALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIIS 488

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNI 591
           G+ +     +A  TF+ M + G++PD  ++ ++L  C++   V+ G +    +++ E   
Sbjct: 489 GFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQS 548

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
           +  +   + +VD+ S+ GN+ +     E  P   D   W +++CG   H   + A K+ E
Sbjct: 549 DAYIS--STLVDMYSKCGNMQDFQLIFEKAP-NRDFVTWNAMVCGYAQHGLGEEALKIFE 605

Query: 652 HVFELEPDNTGYYVLLANVYA 672
           ++ +LE     +   LA + A
Sbjct: 606 YM-QLENVKPNHATFLAVLRA 625



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 232/515 (45%), Gaps = 97/515 (18%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T   +   C++  AL  G+  HA  +   F   +   N L+ MY KC DL  A +VF+ M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103

Query: 329 GERSVVSWTSMIAGYAREG-------VFD-------GAIRLFR-GMVREGIEPDVYAITS 373
            +R  VSW +M+ GYA  G       +FD       G + LF   M R G   D      
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163

Query: 374 ILHACA---------------------CD----------------------GLLEIGKD- 389
           +L +C+                     CD                      G LE+ K+ 
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223

Query: 390 ---------VHDYIKENDMQSSLYVSNALMDMYAKCGSMAD-AESVFNQMPVKDIVSWNT 439
                    +H +  + D  + + +  A +DMY KC +++D +  +FN +P  ++ S+N 
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283

Query: 440 M----------IGALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHG 488
           +          I AL +F  + ++    D V+++    ACA +     G ++HG  ++  
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSL 343

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
             ++  VANAI+DMY KCG LV A  +F+ + ++D +SW  +IA +  +G     ++ F 
Sbjct: 344 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 403

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN--MMRYECNIEPK--LEHYA--CMV 602
            M Q+G+EPDE ++ SVL AC+       GW+  N  M  +   I+ +  L+ +    ++
Sbjct: 404 WMLQSGMEPDEFTYGSVLKACA-------GWQALNCGMEIHNRIIKSRMGLDSFVGIALI 456

Query: 603 DLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDN 660
           D+ S+ G + +A +  + +        W +++ G  +  + + A+K    + E+  +PDN
Sbjct: 457 DMYSKCGMMEKAEKLHDRL-AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 515

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
             Y  +L +  A     E  K++  +I ++ L+ +
Sbjct: 516 FTYATIL-DTCANLVTVELGKQIHAQIIKKELQSD 549


>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
 gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/686 (35%), Positives = 382/686 (55%), Gaps = 29/686 (4%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+   ++  + +  + L   +  LG  +D+   + ++   A  G   ++  A ++FD + 
Sbjct: 10  LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCG---KLHMAGEVFDGMP 66

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           +R+VVSW  ++ G++ +G A + L +F EM   G + +  T+   L  C   G    G  
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQ 124

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H   ++  F       N+L+ MYSK      A RVF+ +  R++ +W SMI+GYA  G 
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184

Query: 349 FDGAIRLFRGMVREGIE-PDVYAITSILHACACDGLLEIGKDVHDY--IKENDMQSSLYV 405
              ++ +FR M R   E PD +   S+L AC+  G    G  VH    ++     S+  +
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAIL 244

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNF----- 454
           + AL+D+Y KC  +  A  VF+ +  ++ + W T+I      G +   + + + F     
Sbjct: 245 AGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGV 304

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
             DG  ++ ++   A  A +E+G+++H Y  +     D +VAN++VDMY+KCG+   A  
Sbjct: 305 RADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGR 364

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
            F  +PA++++SWT MI G G HG G +AI  F +M++ G+E DEV+++++L ACSHSGL
Sbjct: 365 RFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGL 424

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           VDE  R+F+ +  +  + PK EHYACMVDLL R G L EA   I  MP+ P   +W +LL
Sbjct: 425 VDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLL 484

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             CR+H +V +  +V + +  ++ DN   YV+L+N+ AEA +W E + +R  + R+GL+K
Sbjct: 485 SACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRK 544

Query: 695 NPGCSWIEIKGKVNIFVAGG-SSHPHAKKIESLLKRLRLEMK-REGYFPKTRYALINADE 752
             GCSW E+  +V+ F  GG  +HP A  I   L+ +   M+ R GY    R AL + DE
Sbjct: 545 QGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDE 604

Query: 753 MEKEVALCGHSEKLAMAFGILN--------LPAGQTIRVTKNLRVCGDCHEMAKFMSKTA 804
             +  +L  HSE+LA+   +L            G+ +RV KNLRVCGDCHE  K +S   
Sbjct: 605 ESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVV 664

Query: 805 RREIVLRDSNRFHHFKDGRCSCRGFW 830
           RR +V+RD+NRFH F++G CSCR +W
Sbjct: 665 RRVVVVRDANRFHRFQNGACSCRDYW 690



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 223/492 (45%), Gaps = 57/492 (11%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           +    +L+  A   SL  G ++H+ + + G    D +L + L+ M+  CG L     VF+
Sbjct: 5   RMIADLLRASARGSSLRGGVQLHAALMKLGFG-SDTMLNNNLIDMYAKCGKLHMAGEVFD 63

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA------- 209
            +    V  W  LM  +   G  +E L LF +M+  G + + +T S  LK          
Sbjct: 64  GMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGV 123

Query: 210 ---------------VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                          VV NS        R   DA ++FD +  R++ +WN MISGY   G
Sbjct: 124 QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183

Query: 247 VAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVH-AFALKACF-SKEIS 303
                L VF+EM        D  T  ++L  C+  GA   G  VH A A++    +    
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               LLD+Y KC  L  A++VF+ +  R+ + WT++I G+A+EG    A+ LFR     G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           +  D + ++S++   A   L+E GK VH Y  +      + V+N+L+DMY KCG   +A 
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 363

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLA 472
             F +MP +++VSW  MI           A+DLF  M  +  E D V    +L AC+   
Sbjct: 364 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSG 423

Query: 473 ALERGREIHGYILRHGISADRNVANA------IVDMYVKCGVLVLARSLFDMIPAKDLIS 526
            ++  R    Y  R  I  DR +         +VD+  + G L  A+ L   +P +  + 
Sbjct: 424 LVDECRR---YFSR--ICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVG 478

Query: 527 -WTIMIAGYGMH 537
            W  +++   +H
Sbjct: 479 VWQTLLSACRVH 490



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 113/220 (51%), Gaps = 14/220 (6%)

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           I  +L A A    L  G  +H  + +    S   ++N L+DMYAKCG +  A  VF+ MP
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 431 VKDIVSWNT-MIG---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGRE 479
            +++VSW   M+G          L LF  M      P+  T++  L AC        G +
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQ 124

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           IHG  +R G      VAN++V MY K      AR +FD+IP+++L +W  MI+GY   G 
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184

Query: 540 GCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEG 578
           G D++  F +M R+   +PDE +F S+L ACS  G   EG
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREG 224



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 20/275 (7%)

Query: 77  GNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G +++AM +   + S   + D     S++ + AD   +E GK+VH    ++   +D  V 
Sbjct: 287 GQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVA 346

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
            S LV M++ CG   E  R F ++    V  W  +++   K G+ +E++ LF++MQ  G+
Sbjct: 347 NS-LVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGV 405

Query: 195 AADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL-SDRDVVS----WNCMISGYIANGVAE 249
            AD   +   L  L+   +S  V +  + F  +  DR +      + CM+      G A 
Sbjct: 406 EADEVAY---LALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLL---GRAG 459

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF---NN 306
           +  E  + +L++     +    T+LS C     +  GR V    L       +++   +N
Sbjct: 460 ELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSN 519

Query: 307 TLLDM--YSKCGDLDGAIRVFEKMGERSVVSWTSM 339
            L +   + +C  + GA+R  + + ++   SWT +
Sbjct: 520 ILAEAGEWRECQGIRGAMR-RKGLRKQGGCSWTEV 553


>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 217/576 (37%), Positives = 320/576 (55%), Gaps = 18/576 (3%)

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKE--ISFNNTLLDMYSKCGDLDGAIRVFEK 327
           +++++  C+    L+    +HA  ++    +   IS         S   D+  + +VF +
Sbjct: 71  LISLIKSCSKKTHLL---QIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQ 127

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           + + S   +  MI  Y+     +    L+R M R G+ P+  + + ++ +C     L  G
Sbjct: 128 IMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGG 187

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA---- 443
             +H  I  +  QS   +   LMD+Y+ C    +A  VF+++P  D VSWN +I      
Sbjct: 188 LQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHN 247

Query: 444 ---------LDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                     D+  +    FEPD VT   +L ACA+L ALE G  +H YI  HG     N
Sbjct: 248 RRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALN 307

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           + N+++ MY +CG L  A S+F  +  ++++SW+ MI+G+ MHG+G +AI  F  M+Q G
Sbjct: 308 LCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLG 367

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           + PD+ +   VL ACSH GLVD+G  FF+ M     IEP + HY CMVDLL R G L +A
Sbjct: 368 VSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQA 427

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           Y+ I  M + PD+T+W +LL  CRIH    L E+V  H+ EL+    G YVLL N+Y+  
Sbjct: 428 YQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSV 487

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
             W++V  LR+ +  +G++ +PGCS IE+KGKV+ FV     HP   +I  +L  +  ++
Sbjct: 488 GNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQL 547

Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
           K  GY  +    L N    EK   L  HSEKLA+AFG+L  P G TIRV KNLR+C DCH
Sbjct: 548 KIAGYVAELSSELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 607

Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
             AK +S    RE+V+RD  RFHHF++G+CSC G+W
Sbjct: 608 NFAKVLSGAYNREVVIRDRTRFHHFREGQCSCNGYW 643



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 187/382 (48%), Gaps = 44/382 (11%)

Query: 104 QLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR------RVFNK 157
           QL + +KS    KK H +   + I+    +    +   F++   L   R      +VF++
Sbjct: 70  QLISLIKSC--SKKTHLLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQ 127

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CLAVVG---- 212
           I       +N+++  YS + + ++  YL+++M+  G+  +  + S V+K C+ +      
Sbjct: 128 IMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGG 187

Query: 213 ---NSRRVKDAH------------------------KLFDELSDRDVVSWNCMISGYIAN 245
              ++R ++D H                        K+FDE+   D VSWN +IS  I N
Sbjct: 188 LQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHN 247

Query: 246 GVAEKGLEVFKEMLNL--GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
                 L +F  M +   GF  D  T + +L  CAN GAL FG  VH +  +  +   ++
Sbjct: 248 RRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALN 307

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             N+L+ MYS+CG L+ A  +F++M ER+VVSW++MI+G+A  G    AI  F  M + G
Sbjct: 308 LCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLG 367

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADA 422
           + PD   +T +L AC+  GL++ G    D + K   ++ +++    ++D+  + G +  A
Sbjct: 368 VSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQA 427

Query: 423 ESVFNQMPVK-DIVSWNTMIGA 443
             +   M +K D   W T++GA
Sbjct: 428 YQLIMSMVIKPDSTLWRTLLGA 449



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 21/248 (8%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLG--SKLVFMFVTCGDLKEGR 152
           D  T   +LQ CA+L +LE G++VH+ I E G    DG L   + L+ M+  CG L++  
Sbjct: 270 DDVTCLLLLQACANLGALEFGERVHNYIEEHGY---DGALNLCNSLITMYSRCGRLEKAY 326

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            +F ++D   V  W+ ++  ++  G  +E++  F++MQ LG++ D  T + VL   +  G
Sbjct: 327 SIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCG 386

Query: 213 NSRRVKDAHKLFDELS-----DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
               V D    FD +S     + ++  + CM+      G+ ++  ++   M+      D 
Sbjct: 387 ---LVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMV---IKPDS 440

Query: 268 ATMVTVLSGCANCGALMFGRAV--HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
               T+L  C        G  V  H   LKA   +E      LL++YS  G+ D    + 
Sbjct: 441 TLWRTLLGACRIHRHATLGERVIGHLIELKA---QEAGDYVLLLNIYSSVGNWDKVTDLR 497

Query: 326 EKMGERSV 333
           + M E+ +
Sbjct: 498 KFMKEKGI 505


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/571 (40%), Positives = 328/571 (57%), Gaps = 22/571 (3%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  CA  G    G A H   +K  F  ++     LLD Y+K GDL  A RVF  M  R 
Sbjct: 16  ILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMPRRD 75

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD-GLLEIGKDVH 391
           VV+  +MI+  ++ G  + A  LF  M     E +  +  S++  C C  G +   + + 
Sbjct: 76  VVANNAMISALSKHGYVEEARNLFDNMT----ERNSCSWNSMI-TCYCKLGDINSARLMF 130

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM-PVKDIVSWNTMI------GAL 444
           D     D+ S     NA++D Y K   +  A+ +F  M   ++ V+WNTMI      G  
Sbjct: 131 DCNPVKDVVSW----NAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEF 186

Query: 445 DLFVAMLQ-----NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
              ++M Q     N +P  VTM  +L ACA L AL+ G  IHGYI    +  D  + NA+
Sbjct: 187 GTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNAL 246

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           +DMY KCG L  A  +F  +  K++  W  +I G GM+G G +AIA F  M + GI+PD 
Sbjct: 247 IDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDG 306

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+F+ +L  CSHSGL+  G R+F+ M     +EP +EHY CMVDLL R G L EA   I 
Sbjct: 307 VTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIR 366

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP+ P++ + GSLL  C+IH + KL E+V + + EL+P + G YV L+N+YA   +W++
Sbjct: 367 AMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDD 426

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V   R+ + +RG+ K PGCS IE+   V+ FVAG +SHP   +I + L  +  E+K +G+
Sbjct: 427 VNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGH 486

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P T   L + +E EKE A+  HSE++A+AFG+++ P G+TIRV KNLR C DCH   K 
Sbjct: 487 VPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKL 546

Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +S   +REI++RD  RFHHF++G CSC  +W
Sbjct: 547 ISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 168/365 (46%), Gaps = 35/365 (9%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           ++  IL+ CA     + G+  H  I + G   D  +L + L+  +   GDLK  +RVF  
Sbjct: 12  SFSLILRSCAISGEAQLGEAFHCQIMKMGFEYD-MILQTGLLDFYAKVGDLKCAKRVFMG 70

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG--NSR 215
           +    V   N ++   SK G  +E+  LF  M       +S +++ ++ C   +G  NS 
Sbjct: 71  MPRRDVVANNAMISALSKHGYVEEARNLFDNMTE----RNSCSWNSMITCYCKLGDINSA 126

Query: 216 R-------VKD-------------------AHKLFDEL-SDRDVVSWNCMISGYIANGVA 248
           R       VKD                   A +LF  + S R+ V+WN MIS Y+  G  
Sbjct: 127 RLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEF 186

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
              + +F++M +        TMV++LS CA+ GAL  G  +H +        ++   N L
Sbjct: 187 GTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNAL 246

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           +DMY KCG L+ AI VF  +  +++  W S+I G    G  + AI  F  M +EGI+PD 
Sbjct: 247 IDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDG 306

Query: 369 YAITSILHACACDGLLEIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
                IL  C+  GLL  G+    + +    ++  +     ++D+  + G + +A  +  
Sbjct: 307 VTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIR 366

Query: 428 QMPVK 432
            MP+K
Sbjct: 367 AMPMK 371



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 16/230 (6%)

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M+R  + P   + + IL +CA  G  ++G+  H  I +   +  + +   L+D YAK G 
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60

Query: 419 MADAESVFNQMPVKDIVSWNTMIGALDL--FVAMLQNF-----EPDGVTMACILPACASL 471
           +  A+ VF  MP +D+V+ N MI AL    +V   +N      E +  +   ++     L
Sbjct: 61  LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKL 120

Query: 472 AALERGREIHGYILRHGISADRNVA--NAIVDMYVKCGVLVLARSLFDMI-PAKDLISWT 528
             +   R      L    +  ++V   NAI+D Y K   LV A+ LF ++  A++ ++W 
Sbjct: 121 GDINSAR------LMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWN 174

Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
            MI+ Y   G    AI+ F  M+   ++P EV+ +S+L AC+H G +D G
Sbjct: 175 TMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMG 224



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 11/200 (5%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +N  I  + + G    A+ +     SE  K    T  S+L  CA L +L+ G+ +H  I 
Sbjct: 173 WNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIR 232

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
              + ID  VLG+ L+ M+  CG L+    VF+ +    +F WN ++      G  +E++
Sbjct: 233 TKRLKIDV-VLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAI 291

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL-----SDRDVVSWNCM 238
             F  M+  GI  D  TF  +   L+   +S  +    + F E+      +  V  + CM
Sbjct: 292 AAFIVMEKEGIKPDGVTFVGI---LSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCM 348

Query: 239 ISGYIANGVAEKGLEVFKEM 258
           +      G  ++ LE+ + M
Sbjct: 349 VDLLGRAGYLKEALELIRAM 368


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/663 (34%), Positives = 374/663 (56%), Gaps = 29/663 (4%)

Query: 193 GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL 252
           G   D++  + ++   A  G    ++ A K+FDEL  R+VVSW  +++GY+ +   E  +
Sbjct: 99  GAHKDAFLMTFLVNVYAKCGT---METARKVFDELPRRNVVSWTTLMTGYVHDSKPELAV 155

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMY 312
           +VF+EML  G      T+ T LS  ++  +   G+ +H +++K     + S  N+L  +Y
Sbjct: 156 QVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLY 215

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           SKCG L+ A++ F ++ +++V+SWT++I+ +   G     ++ F  M+ E +EP+ + +T
Sbjct: 216 SKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLT 275

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           S L  C     L+IG  +H    +   +S+L + N++M +Y KCG + +A+ +F++M   
Sbjct: 276 SALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETI 335

Query: 433 DIVSWNTMIG---------------------ALDLFVAMLQN-FEPDGVTMACILPACAS 470
            +V+WN MI                      AL +F+ + ++  +PD  T + +L  C+S
Sbjct: 336 SLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSS 395

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           L ALE+G ++H   ++ G  +D  V  A+V+MY KCG +  A   F  +  + LISWT M
Sbjct: 396 LVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSM 455

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I GY  +G    A+  F DMR AG+ P++++F+ VL ACSH+G+VDE   +F MM+ E  
Sbjct: 456 ITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYK 515

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVA 650
           I P ++HYAC++D+  R G L EA+ FI+ M + P+  IW  L+ GCR   +++L    A
Sbjct: 516 ITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAA 575

Query: 651 EHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIF 710
           E +  L+P +T  Y LL N+Y  A KW+EV ++R+ +    L +    SWI IK K+  F
Sbjct: 576 EQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSF 635

Query: 711 VAGGSSHPHAKKIESLLKRLRLEMKREGY-FPKTRYALINADEMEKEVALCG---HSEKL 766
                SH  + ++  LL  L  + K  GY + ++       ++ ++E AL     HSEKL
Sbjct: 636 KRNARSHAQSGEMYELLGNLHEKAKSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKL 695

Query: 767 AMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           A+AFG+LN      IRVTK++ +C DCH   + +S  + REI++RDS R H F +G CSC
Sbjct: 696 AIAFGLLNTSNAVPIRVTKSISMCRDCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSC 755

Query: 827 RGF 829
             F
Sbjct: 756 GDF 758



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 239/503 (47%), Gaps = 63/503 (12%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           E +K+++  Y  ILQ C D K + D +K+H+ I ++G    D  L + LV ++  CG ++
Sbjct: 63  EGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTG-AHKDAFLMTFLVNVYAKCGTME 121

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL- 208
             R+VF+++    V  W  LM  Y      + ++ +F++M   G    +YT    L    
Sbjct: 122 TARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASS 181

Query: 209 -----------------------AVVGNSR--------RVKDAHKLFDELSDRDVVSWNC 237
                                  A +GNS          ++ A K F  + D++V+SW  
Sbjct: 182 DLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTT 241

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           +IS +  NG A  GL+ F EML+     +  T+ + LS C    +L  G  +H+  +K  
Sbjct: 242 VISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLG 301

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF-------- 349
           F   +   N+++ +Y KCG +  A ++F++M   S+V+W +MIAG+AR   F        
Sbjct: 302 FESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAH 361

Query: 350 ---DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
                A+ +F  + R G++PD++  +S+L  C+    LE G+ VH    +    S + V 
Sbjct: 362 QCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVG 421

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFE 455
            AL++MY KCGS+  A   F +M ++ ++SW +MI           AL LF  M L    
Sbjct: 422 TALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVR 481

Query: 456 PDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARS 514
           P+ +T   +L AC+    ++   +    +   + I+   +    ++DM+V+ G L  A  
Sbjct: 482 PNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEA-- 539

Query: 515 LFDMIPAKDL----ISWTIMIAG 533
            FD I   DL      W+I+IAG
Sbjct: 540 -FDFIKEMDLEPNEFIWSILIAG 561



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 181/343 (52%), Gaps = 25/343 (7%)

Query: 245 NGVAEKGLEVFKEMLNL---GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           +GV+E     F+E L+    G  V+ A  V +L  C +   +   + +HA  +K    K+
Sbjct: 44  DGVSEARCLDFREALSFIREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKD 103

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
                 L+++Y+KCG ++ A +VF+++  R+VVSWT+++ GY  +   + A+++FR M+ 
Sbjct: 104 AFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLE 163

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
            G  P  Y + + L A +     E+GK +H Y  +  ++    + N+L  +Y+KCGS+  
Sbjct: 164 AGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLEC 223

Query: 422 AESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACAS 470
           A   F ++  K+++SW T+I A          L  FV ML    EP+  T+   L  C  
Sbjct: 224 AVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCV 283

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
           + +L+ G +IH   ++ G  ++  + N+I+ +Y+KCG +  A+ LFD +    L++W  M
Sbjct: 284 MQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAM 343

Query: 531 IAGY-----------GMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           IAG+             H  G +A++ F  + ++G++PD  +F
Sbjct: 344 IAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTF 386



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 125/259 (48%), Gaps = 22/259 (8%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D  T+ S+L +C+ L +LE G++VH+   ++G  + D V+G+ LV M+  CG ++   
Sbjct: 380 KPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGF-LSDVVVGTALVNMYNKCGSIERAS 438

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           + F ++    +  W  ++  Y++ G  +++L LF+ M+  G+  +  TF  VL   +  G
Sbjct: 439 KAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAG 498

Query: 213 NSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
               V +A   F  + +   ++     + C+I  ++  G  ++  +  KEM +L  N  +
Sbjct: 499 ---MVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEM-DLEPNEFI 554

Query: 268 ATMVTVLSGCANCGALMFG--RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
            ++  +++GC + G L  G   A     LK    K+    N LL+MY   G      RV 
Sbjct: 555 WSI--LIAGCRSQGKLELGFYAAEQLLNLKP---KDTETYNLLLNMYLSAGKWKEVSRVR 609

Query: 326 -----EKMGERSVVSWTSM 339
                EK+G     SW S+
Sbjct: 610 KMMKEEKLGRLKDWSWISI 628


>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 565

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/538 (40%), Positives = 324/538 (60%), Gaps = 12/538 (2%)

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
           +N L++ Y + GDL  A +VF++M +R + +W +MIAG  +    +  + LFR M   G 
Sbjct: 28  SNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGF 87

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
            PD Y + S+    A    + IG+ +H Y  +  ++  L V+++L  MY + G + D E 
Sbjct: 88  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147

Query: 425 VFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAA 473
           V   MPV+++V+WNT+I            L L+  M +    P+ +T   +L +C+ LA 
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
             +G++IH   ++ G S+   V ++++ MY KCG L  A   F     +D + W+ MI+ 
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267

Query: 534 YGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           YG HG G +AI  FN M  Q  +E +EV+F+++LYACSHSGL D+G   F+MM  +   +
Sbjct: 268 YGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P L+HY C+VDLL R G L +A   I+ MP+ PD  IW +LL  C IH   ++A+KV + 
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKE 387

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           + E++P+++  YVLLANV+A A++W +V ++R+ +  + +KK  G SW E KG+V+ F  
Sbjct: 388 ILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKM 447

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  S   +K+I S LK L LEMK +GY P T   L + DE EKE  L  HSEKLA+AF +
Sbjct: 448 GDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFAL 507

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           + LP G  IR+ KNLRVC DCH   K++S    REI LRD +RFHHF +G+CSC  +W
Sbjct: 508 MILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCGDYW 565



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 212/431 (49%), Gaps = 26/431 (6%)

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD 229
           M  YSK G+   ++ L+++M+     + +   +  ++   +V        A K+FDE+ D
Sbjct: 1   MSMYSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVS-------ARKVFDEMPD 53

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           R + +WN MI+G I     E+GL +F+EM  LGF+ D  T+ +V SG A   ++  G+ +
Sbjct: 54  RKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQI 113

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H +A+K     ++  N++L  MY + G L     V   M  R++V+W ++I G A+ G  
Sbjct: 114 HGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCP 173

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
           +  + L++ M   G  P+     ++L +C+   +   G+ +H    +    S + V ++L
Sbjct: 174 ETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSL 233

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN--FEPD 457
           + MY+KCG + DA   F++   +D V W++MI           A+ LF +M +    E +
Sbjct: 234 ISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVN 293

Query: 458 GVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLF 516
            V    +L AC+     ++G E+   ++ ++G          +VD+  + G L  A ++ 
Sbjct: 294 EVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAII 353

Query: 517 DMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
             +P K D + W  +++   +H     A   F ++ +  I+P++ S   VL A  H+   
Sbjct: 354 KSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILE--IDPND-SACYVLLANVHASA- 409

Query: 576 DEGWRFFNMMR 586
            + WR  + +R
Sbjct: 410 -KRWRDVSEVR 419



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 181/385 (47%), Gaps = 42/385 (10%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           L+  +V  GDL   R+VF+++ + K+  WN ++    +    +E L LF++M  LG + D
Sbjct: 31  LINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPD 90

Query: 198 SYTFSCVLKC-----------------------LAVVGNSR---------RVKDAHKLFD 225
            YT   V                          L +V NS          +++D   +  
Sbjct: 91  EYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            +  R++V+WN +I G   NG  E  L ++K M   G   +  T VTVLS C++      
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ +HA A+K   S  ++  ++L+ MYSKCG L  A + F +  +   V W+SMI+ Y  
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270

Query: 346 EGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSL 403
            G  D AI+LF  M  +  +E +  A  ++L+AC+  GL + G ++ D + E    +  L
Sbjct: 271 HGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDLF--VAMLQN-----FE 455
                ++D+  + G +  AE++   MP+K D V W T++ A ++     M Q       E
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILE 390

Query: 456 PDGVTMACILPACASLAALERGREI 480
            D    AC +      A+ +R R++
Sbjct: 391 IDPNDSACYVLLANVHASAKRWRDV 415



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 140/325 (43%), Gaps = 45/325 (13%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T  S+    A L+S+  G+++H    + G+ +D  V+ S L  M++  G L++G  V
Sbjct: 90  DEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELD-LVVNSSLAHMYMRNGKLQDGEIV 148

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVV 211
              +    +  WN L+   ++ G  +  LYL+K M+  G   +  TF  VL     LA+ 
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208

Query: 212 GNSRRVK-----------------------------DAHKLFDELSDRDVVSWNCMISGY 242
           G  +++                              DA K F E  D D V W+ MIS Y
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268

Query: 243 IANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL---KACF 298
             +G  ++ +++F  M       V+    + +L  C++ G  +  + +  F +   K  F
Sbjct: 269 GFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSG--LKDKGLELFDMMVEKYGF 326

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLFR 357
              +     ++D+  + G LD A  + + M  +   V W ++++        + A ++F+
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFK 386

Query: 358 GMVREGIEPD---VYAITSILHACA 379
            ++   I+P+    Y + + +HA A
Sbjct: 387 EILE--IDPNDSACYVLLANVHASA 409


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 244/706 (34%), Positives = 383/706 (54%), Gaps = 50/706 (7%)

Query: 93   KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
            K    T  S+L   A L++L  G  VH+   + G+   +  +GS L+ M+  C  ++  +
Sbjct: 346  KSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLN-SNVYVGSSLINMYAKCEKMEAAK 404

Query: 153  RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---CLA 209
            +VF+ +D   + +WN ++  Y++ G   + + LF +M+  G   D +T++ +L    CL 
Sbjct: 405  KVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLE 464

Query: 210  VVGNSRRV-----------------------------KDAHKLFDELSDRDVVSWNCMIS 240
             +   R++                             ++A + F+ + +RD VSWN +I 
Sbjct: 465  CLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIV 524

Query: 241  GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
            GY+     ++   +F+ M+  G   D  ++ ++LSGCAN  AL  G  VH F +K+    
Sbjct: 525  GYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQT 584

Query: 301  EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
             +   ++L+DMY KCG ++ A  VF  M  RSVVS  ++IAGYA+  + + AI LF+ M 
Sbjct: 585  CLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVE-AIDLFQEMQ 643

Query: 361  REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM-QSSLYVSNALMDMYAKCGSM 419
             EG+ P      S+L AC     L +G+ +H  I++  +     ++  +L+ MY      
Sbjct: 644  NEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRK 703

Query: 420  ADAESVFN--QMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILP 466
             DA+ +F+  Q P K  + W  +I           AL L+  M +N   PD  T A +L 
Sbjct: 704  TDADILFSEFQYP-KSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLR 762

Query: 467  ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLI 525
            AC+ LA+L  GR IH  I   G+ +D    +A+VDMY KCG +  +  +F+ + +K D+I
Sbjct: 763  ACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVI 822

Query: 526  SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
            SW  MI G+  +G+  +A+  F++M+   I PD+V+F+ VL ACSH+G V EG   F++M
Sbjct: 823  SWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIM 882

Query: 586  RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
             +   I P+L+H ACM+DLL R G L EA  FI+ +   P+A IW +LL  CRIH +   
Sbjct: 883  VHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIR 942

Query: 646  AEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
              + AE + ELEP+N+  YVLL+N+YA +  W+EV  +R  +  +GL+K PGCSWI +  
Sbjct: 943  GRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQ 1002

Query: 706  KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
            K N+FVAG   HP A +I +LLK L   MK +GY  +T   L + D
Sbjct: 1003 KTNLFVAGDKFHPSAGEIHALLKDLIALMKEDGYIAETDSLLEDED 1048



 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 172/518 (33%), Positives = 294/518 (56%), Gaps = 18/518 (3%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIIC 123
           +N+ +  +   G+LE+ +    S +   +     TY  +L  CA L  ++ GK+VH  + 
Sbjct: 150 WNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVI 209

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           + G   +    GS L+ M+  CG L + R++F+ + +     W  ++  Y + G  +E+L
Sbjct: 210 KMGFEFNSFCEGS-LIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEAL 268

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
            +F+ MQ LG+  D   F  V+     +G   R+ DA  LF ++ + +VV+WN MISG++
Sbjct: 269 KVFEDMQKLGLVPDQVAFVTVITACVGLG---RLDDACDLFVQMPNTNVVAWNVMISGHV 325

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
             G   + ++ FK M   G     +T+ +VLS  A+  AL +G  VHA A+K   +  + 
Sbjct: 326 KRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVY 385

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
             ++L++MY+KC  ++ A +VF+ + ER++V W +M+ GYA+ G     ++LF  M   G
Sbjct: 386 VGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCG 445

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
             PD +  TSIL ACAC   LE+G+ +H +I +++ + +L+V N L+DMYAKCG++ +A 
Sbjct: 446 FWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEAR 505

Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLA 472
             F  +  +D VSWN +I           A ++F  M L    PD V++A IL  CA+L 
Sbjct: 506 QQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQ 565

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           ALE+G ++H ++++ G+       ++++DMYVKCG +  AR +F  +P++ ++S   +IA
Sbjct: 566 ALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIA 625

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
           GY  +    +AI  F +M+  G+ P E++F S+L AC+
Sbjct: 626 GYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDACT 662



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 256/547 (46%), Gaps = 83/547 (15%)

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
           G LGS +V ++  CG+++   + FN+++   +  WN ++  YS+ G+ ++ ++ F  +Q+
Sbjct: 116 GRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQN 175

Query: 192 LGIAADSYTFSCVLKCLA--------------------------------VVGNSRRVKD 219
            G++ + +T++ VL   A                                +      + D
Sbjct: 176 CGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVD 235

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A K+FD + D D VSW  MI+GY+  G+ E+ L+VF++M  LG   D    VTV++ C  
Sbjct: 236 ARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVG 295

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
            G                                    LD A  +F +M   +VV+W  M
Sbjct: 296 LGR-----------------------------------LDDACDLFVQMPNTNVVAWNVM 320

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I+G+ + G    AI  F+ M + G++     + S+L A A    L  G  VH    +  +
Sbjct: 321 ISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGL 380

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVA 449
            S++YV ++L++MYAKC  M  A+ VF+ +  +++V WN M+G           + LF  
Sbjct: 381 NSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSE 440

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M    F PD  T   IL ACA L  LE GR++H +I++H    +  V N +VDMY KCG 
Sbjct: 441 MRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGA 500

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  AR  F+ I  +D +SW  +I GY       +A   F  M   GI PDEVS  S+L  
Sbjct: 501 LEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSG 560

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP----VA 624
           C++   +++G +    +  +  ++  L   + ++D+  + G +  A      MP    V+
Sbjct: 561 CANLQALEQGEQVHCFL-VKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVS 619

Query: 625 PDATIWG 631
            +A I G
Sbjct: 620 MNAIIAG 626



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 222/456 (48%), Gaps = 51/456 (11%)

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
            G  +     S ++   A  GN   V+ A K F++L  RD+++WN ++S Y   G  E+ 
Sbjct: 110 FGFGSKGRLGSAIVDLYAKCGN---VEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQV 166

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           +  F  + N G + +  T   VLS CA    +  G+ VH   +K  F        +L+DM
Sbjct: 167 IWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDM 226

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           YSKCG L  A ++F+ + +   VSWT+MIAGY + G+ + A+++F  M + G+ PD  A 
Sbjct: 227 YSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAF 286

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
            +++ AC   GL                                 G + DA  +F QMP 
Sbjct: 287 VTVITACV--GL---------------------------------GRLDDACDLFVQMPN 311

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI 480
            ++V+WN MI           A+D F  M +   +    T+  +L A ASL AL  G  +
Sbjct: 312 TNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLV 371

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           H   ++ G++++  V +++++MY KC  +  A+ +FD +  ++L+ W  M+ GY  +G+ 
Sbjct: 372 HAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYA 431

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
              +  F++MR  G  PDE ++ S+L AC+    ++ G +  + +  + N E  L     
Sbjct: 432 SKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFI-IKHNFEYNLFVENT 490

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           +VD+ ++ G L EA +  E +    D   W +++ G
Sbjct: 491 LVDMYAKCGALEEARQQFEFIR-NRDNVSWNAIIVG 525



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 87/163 (53%), Gaps = 7/163 (4%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           + A I    + G  E+A+++     +  ++ D  T+ S+L+ C+ L SL DG+ +HS+I 
Sbjct: 722 WTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIF 781

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFIWNLLMHEYSKTGNFKES 182
             G+  D+ + GS +V M+  CGD+K   +VF ++     V  WN ++  ++K G  + +
Sbjct: 782 HVGLDSDE-LTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENA 840

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
           L +F +M+   I  D  TF  VL   +  G   RV +  ++FD
Sbjct: 841 LKIFDEMKHTRIRPDDVTFLGVLTACSHAG---RVSEGREIFD 880



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 34/208 (16%)

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
           + IH   L+ G  +   + +AIVD+Y KCG +  A   F+ +  +D+++W  +++ Y   
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACS-----------HSGLVDEGWRFFNMMR 586
           G     I  F  ++  G+ P++ ++  VL +C+           H G++  G+ F +   
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
                         ++D+ S+ G+L +A +  + + V PD   W +++ G   + +V L 
Sbjct: 221 ------------GSLIDMYSKCGSLVDARKIFDAV-VDPDTVSWTAMIAG---YVQVGLP 264

Query: 647 EKVAEHVFE------LEPDNTGYYVLLA 668
           E+ A  VFE      L PD   +  ++ 
Sbjct: 265 EE-ALKVFEDMQKLGLVPDQVAFVTVIT 291


>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
 gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
          Length = 948

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 255/827 (30%), Positives = 422/827 (51%), Gaps = 70/827 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A +  +   G+ ++A+++L+ +     K D       ++     + L  G+  H  I
Sbjct: 131 SFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDLSLGRFFHDTI 190

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEG----RRVFNKIDNGKVFIWNLLMHEYSKTGN 178
              G  +D GV  S L+ M+  CG+++       R F +  +  V  W  ++   ++  +
Sbjct: 191 RRCGYDLDAGVAIS-LIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRD 249

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR---------------------- 216
           +  +L LF +M+  G+  D   F  VL  +  +G+  +                      
Sbjct: 250 YIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMIGTA 309

Query: 217 ----------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                     ++DA + FD +    V +W  +I  Y   G     +++ + M   G   +
Sbjct: 310 VVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGVKPN 369

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFA---LKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             T +T+L  C N  AL  G+ + A A    +            ++ M+S+   +  A  
Sbjct: 370 EVTFITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILARE 428

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
            F+K+ ++SV ++T+MIAGYA       A+ +F+ M+R  +  D   +   + ACA    
Sbjct: 429 AFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPD 488

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-- 441
           LE GK +H    +  +     V  AL+DMY++CGSM DA +VF ++   D ++W+ MI  
Sbjct: 489 LEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTIAWSAMIAA 548

Query: 442 --------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERG-REIHGYILRHGISA 491
                   GA+ +   M Q+ + P G TM  +L ACA    +E   R++H  ++  G  +
Sbjct: 549 LGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGGFDS 608

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY---GMHGFGCDAIATFN 548
           D  V  A++ MY K G +  A + FD I   D+ +WT M+  Y   G +     A+    
Sbjct: 609 DPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLAR 668

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            M+Q G+ PD+V+F+ +L AC++ G + E  R+F  M+++  + P++EHY  +VD ++R 
Sbjct: 669 MMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARK 728

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE----LEPDNTGYY 664
           G L EA   I M+P+  +  IW +LL  C+  ++    ++V E + +    L+P  TG +
Sbjct: 729 GYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLDPLGTGAH 788

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
            +       A +WEE K++R+ ++ RG+KK PG S I IK  V+ FVAG  SHPH ++I 
Sbjct: 789 RV-------AARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSHPHTREIY 841

Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVT 784
           + + R+   +K++GY P TRY L +  E +KE  L  HSE+LAMA+G +N P GQ +RV 
Sbjct: 842 AEVDRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVI 901

Query: 785 KNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF-KDGRCSCRGFW 830
           KNLRVCGDCH  +K  +K  +REI++RD+ RFHHF KDG CSC  +W
Sbjct: 902 KNLRVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/616 (25%), Positives = 284/616 (46%), Gaps = 55/616 (8%)

Query: 75  EVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           E   L++ + ++ + ++   D  +Y  +LQLC  L+++ +G +VH  I  S +  +  V 
Sbjct: 43  EFRELQEFLRIIDARDEP-FDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFV- 100

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
           G+ LVFM+   G+  E RR+F+ + +  +  +  +M  Y   G+  E+L +    +    
Sbjct: 101 GNDLVFMYAAFGNPGEARRIFDGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAF 160

Query: 195 AADS--------------------YTFSCVLKC---------LAVVG---NSRRVKDAHK 222
            AD                     +    + +C         ++++G   N   ++ A +
Sbjct: 161 KADPPMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQ 220

Query: 223 LFDELSDR----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
            FD    R    DVVSW  +++    +      L++F  M   G   D    VTVL    
Sbjct: 221 AFDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVI 280

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
             G +  G+ +H+  L     ++      ++ MY++ G +  A R F+++ +  V +WT 
Sbjct: 281 GLGDIAQGKRIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTV 340

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +I  Y R G F+  +++   M  EG++P+     +IL  C  +  LE GK +     E  
Sbjct: 341 LIGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCK-NLALEDGKKIQALASEQQ 399

Query: 399 MQS---SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
            +S   S  +  A++ M+++  SM  A   F+++  K + ++  MI           AL 
Sbjct: 400 QRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALA 459

Query: 446 LFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           +F  M+ +    D + +A  + ACAS+  LE G+ +H   +  G+  D  V  A+VDMY 
Sbjct: 460 IFQEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYS 519

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           +CG +  A ++F  I   D I+W+ MIA  G HG    A+A    M+Q G  P   + + 
Sbjct: 520 RCGSMEDASAVFGEIERPDTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVG 579

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           VL AC+H+G+++E  R  + +  +   +   E    ++ + ++ G++ EA    + +   
Sbjct: 580 VLAACAHAGMMEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-N 638

Query: 625 PDATIWGSLLCG-CRI 639
           PD   W ++L   CR+
Sbjct: 639 PDVKAWTTMLEAYCRL 654


>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
 gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
          Length = 864

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/556 (40%), Positives = 334/556 (60%), Gaps = 15/556 (2%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  CA  GA+M  +A H   ++     +++  N L++ YSKCG ++ A +VF+ M ERS
Sbjct: 59  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA--CDGLLEIGKDV 390
           +VSW +MI  Y R  +   A+ +F  M  EG +   + I+S+L AC   CD L    K +
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALE--CKKL 176

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H    +  +  +LYV  AL+D+YAKCG + DA  VF  M  K  V+W++M+         
Sbjct: 177 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 236

Query: 443 --ALDLFV-AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL L+  A   + E +  T++ ++ AC++LAAL  G+++H  I + G  ++  VA++ 
Sbjct: 237 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 296

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY KCG L  +  +F  +  K+L  W  +I+G+  H    + +  F  M+Q G+ P+E
Sbjct: 297 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 356

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+F S+L  C H+GLV+EG RFF +MR    + P + HY+CMVD+L R G LSEAY  I+
Sbjct: 357 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 416

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            +P  P A+IWGSLL  CR++  ++LAE  AE +FELEP+N G +VLL+N+YA  ++WEE
Sbjct: 417 SIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEE 476

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           + K R+ +    +KK  G SWI+IK KV+ F  G S HP  ++I S L  L ++ ++ GY
Sbjct: 477 IAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGY 536

Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
            P   + L + +  +KE  L  HSEKLA+ FG++ LP    +R+ KNLR+C DCHE  K 
Sbjct: 537 KPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKA 596

Query: 800 MSKTARREIVLRDSNR 815
            S   RR I++RD NR
Sbjct: 597 ASMATRRFIIVRDVNR 612



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/425 (23%), Positives = 203/425 (47%), Gaps = 51/425 (12%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCS----------ILQLCADLKSLEDGKKVH 119
           + R     +L + + VL S ++ ++    Y +          ILQLCA   ++ + K  H
Sbjct: 17  LPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACH 76

Query: 120 SIICESGIVID---DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
             I    I ID   D  L + L+  +  CG ++  R+VF+ +    +  WN ++  Y++ 
Sbjct: 77  GKI----IRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRN 132

Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLK---------------CLAV---------VG 212
               E+L +F +M++ G     +T S VL                CL+V         VG
Sbjct: 133 RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVG 192

Query: 213 NSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
            +          +KDA ++F+ + D+  V+W+ M++GY+ N   E+ L +++    +   
Sbjct: 193 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 252

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            +  T+ +V+  C+N  AL+ G+ +HA   K+ F   +   ++ +DMY+KCG L  +  +
Sbjct: 253 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 312

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F ++ E+++  W ++I+G+A+       + LF  M ++G+ P+    +S+L  C   GL+
Sbjct: 313 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 372

Query: 385 EIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIG 442
           E G+     ++    +  ++   + ++D+  + G +++A  +   +P     S W +++ 
Sbjct: 373 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 432

Query: 443 ALDLF 447
           +  ++
Sbjct: 433 SCRVY 437


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/686 (35%), Positives = 381/686 (55%), Gaps = 29/686 (4%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+   ++  + +  + L   +  LG  +D+   + ++   A  G   ++  A ++FD + 
Sbjct: 206 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCG---KLHMAGEVFDGMP 262

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           +R+VVSW  ++ G++ +G A + L +F EM   G + +  T+   L  C   G    G  
Sbjct: 263 ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQ 320

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H   ++  F       N+L+ MYSK      A RVF+ +  R++ +W SMI+GYA  G 
Sbjct: 321 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 380

Query: 349 FDGAIRLFRGMVREGIE-PDVYAITSILHACACDGLLEIGKDVHDY--IKENDMQSSLYV 405
              ++ +FR M R   E PD +   S+L AC+  G    G  VH    ++     S+  +
Sbjct: 381 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAIL 440

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNF----- 454
           + AL+D+Y KC  +  A  VF+ +  ++ + W T+I      G +   + + + F     
Sbjct: 441 AGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGV 500

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
             DG  ++ ++   A  A +E+G+++H Y  +     D +VAN++VDMY+KCG+   A  
Sbjct: 501 RADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGR 560

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
            F  +PA++++SWT MI G G HG G +AI  F +M+  G+E DEV+++++L ACSHSGL
Sbjct: 561 RFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGL 620

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           VDE  R+F+ +  +  + PK EHYACMVDLL R G L EA   I  MP+ P   +W +LL
Sbjct: 621 VDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLL 680

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             CR+H +V +  +V + +  ++ DN   YV+L+N+ AEA +W E + +R  + R+GL+K
Sbjct: 681 SACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRK 740

Query: 695 NPGCSWIEIKGKVNIFVAGG-SSHPHAKKIESLLKRLRLEMK-REGYFPKTRYALINADE 752
             GCSW E+  +V+ F  GG  +HP A  I   L+ +   M+ R GY    R AL + DE
Sbjct: 741 QGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDE 800

Query: 753 MEKEVALCGHSEKLAMAFGILN--------LPAGQTIRVTKNLRVCGDCHEMAKFMSKTA 804
             +  +L  HSE+LA+   +L            G+ +RV KNLRVCGDCHE  K +S   
Sbjct: 801 ESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVV 860

Query: 805 RREIVLRDSNRFHHFKDGRCSCRGFW 830
           RR +V+RD+NRFH F++G CSCR +W
Sbjct: 861 RRVVVVRDANRFHRFQNGACSCRDYW 886



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 223/492 (45%), Gaps = 57/492 (11%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           +    +L+  A   SL  G ++H+ + + G    D +L + L+ M+  CG L     VF+
Sbjct: 201 RMIADLLRASARGSSLRGGVQLHAALMKLGFG-SDTMLNNNLIDMYAKCGKLHMAGEVFD 259

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA------- 209
            +    V  W  LM  +   G  +E L LF +M+  G + + +T S  LK          
Sbjct: 260 GMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGV 319

Query: 210 ---------------VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                          VV NS        R   DA ++FD +  R++ +WN MISGY   G
Sbjct: 320 QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 379

Query: 247 VAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVH-AFALKACF-SKEIS 303
                L VF+EM        D  T  ++L  C+  GA   G  VH A A++    +    
Sbjct: 380 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 439

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               LLD+Y KC  L  A++VF+ +  R+ + WT++I G+A+EG    A+ LFR     G
Sbjct: 440 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 499

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           +  D + ++S++   A   L+E GK VH Y  +      + V+N+L+DMY KCG   +A 
Sbjct: 500 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 559

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLA 472
             F +MP +++VSW  MI           A+DLF  M  +  E D V    +L AC+   
Sbjct: 560 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSG 619

Query: 473 ALERGREIHGYILRHGISADRNVANA------IVDMYVKCGVLVLARSLFDMIPAKDLIS 526
            ++  R    Y  R  I  DR +         +VD+  + G L  A+ L   +P +  + 
Sbjct: 620 LVDECRR---YFSR--ICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVG 674

Query: 527 -WTIMIAGYGMH 537
            W  +++   +H
Sbjct: 675 VWQTLLSACRVH 686



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 113/220 (51%), Gaps = 14/220 (6%)

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           I  +L A A    L  G  +H  + +    S   ++N L+DMYAKCG +  A  VF+ MP
Sbjct: 203 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 262

Query: 431 VKDIVSWNT-MIG---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGRE 479
            +++VSW   M+G          L LF  M      P+  T++  L AC        G +
Sbjct: 263 ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQ 320

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           IHG  +R G      VAN++V MY K      AR +FD+IP+++L +W  MI+GY   G 
Sbjct: 321 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 380

Query: 540 GCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEG 578
           G D++  F +M R+   +PDE +F S+L ACS  G   EG
Sbjct: 381 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREG 420



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 126/275 (45%), Gaps = 20/275 (7%)

Query: 77  GNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G +++AM +   + S   + D     S++ + AD   +E GK+VH    ++   +D  V 
Sbjct: 483 GQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVA 542

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
            S LV M++ CG   E  R F ++    V  W  +++   K G+ +E++ LF++MQ+ G+
Sbjct: 543 NS-LVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGV 601

Query: 195 AADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL-SDRDVVS----WNCMISGYIANGVAE 249
            AD   +   L  L+   +S  V +  + F  +  DR +      + CM+      G A 
Sbjct: 602 EADEVAY---LALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVD---LLGRAG 655

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF---NN 306
           +  E  + +L++     +    T+LS C     +  GR V    L       +++   +N
Sbjct: 656 ELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSN 715

Query: 307 TLLDM--YSKCGDLDGAIRVFEKMGERSVVSWTSM 339
            L +   + +C  + GA+R  + + ++   SWT +
Sbjct: 716 ILAEAGEWRECQGIRGAMR-RKGLRKQGGCSWTEV 749


>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
 gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
          Length = 948

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 255/827 (30%), Positives = 422/827 (51%), Gaps = 70/827 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++ A +  +   G+ ++A+++L+ +     K D       ++     + L  G+  H  I
Sbjct: 131 SFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDLSLGRFFHDTI 190

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEG----RRVFNKIDNGKVFIWNLLMHEYSKTGN 178
              G  +D GV  S L+ M+  CG+++       R F +  +  V  W  ++   ++  +
Sbjct: 191 RRCGYDLDAGVAIS-LIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRD 249

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR---------------------- 216
           +  +L LF +M+  G+  D   F  VL  +  +G+  +                      
Sbjct: 250 YIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMVGTA 309

Query: 217 ----------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
                     ++DA + FD +    V +W  ++  Y   G     +++ + M   G   +
Sbjct: 310 VVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGVKPN 369

Query: 267 LATMVTVLSGCANCGALMFGRAVHAFA---LKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             T +T+L  C N  AL  G+ + A A    +            ++ M+S+   +  A  
Sbjct: 370 EVTFITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILARE 428

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
            F+K+ ++SV ++T+MIAGYA       A+ +F+ M+R  +  D   +   + ACA    
Sbjct: 429 AFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPD 488

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-- 441
           LE GK +H    +  +     V  AL+DMY++CGSM DA +VF ++   D V+W+ MI  
Sbjct: 489 LEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVAWSAMIAA 548

Query: 442 --------GALDLFVAMLQN-FEPDGVTMACILPACASLAALERG-REIHGYILRHGISA 491
                   GA+ +   M Q+ + P G TM  +L ACA    +E   R++H  ++  G  +
Sbjct: 549 LGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGFDS 608

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY---GMHGFGCDAIATFN 548
           D  V  A++ MY K G +  A + FD I   D+ +WT M+  Y   G +     A+    
Sbjct: 609 DPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLAR 668

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            M+Q G+ PD+V+F+ +L AC++ G + E  R+F  M+++  + P++EHY  +VD ++R 
Sbjct: 669 MMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARK 728

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE----LEPDNTGYY 664
           G L EA   I M+P+  +  IW +LL  C+  ++    ++V E + +    L+P  TG +
Sbjct: 729 GYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLDPLGTGAH 788

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
            +       A +WEE K++R+ ++ RG+KK PG S I IK  V+ FVAG  SHPH ++I 
Sbjct: 789 RV-------AARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSHPHTREIY 841

Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVT 784
           + + R+   +K++GY P TRY L +  E +KE  L  HSE+LAMA+G +N P GQ +RV 
Sbjct: 842 AEVDRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVI 901

Query: 785 KNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF-KDGRCSCRGFW 830
           KNLRVCGDCH  +K  +K  +REI++RD+ RFHHF KDG CSC  +W
Sbjct: 902 KNLRVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 153/605 (25%), Positives = 281/605 (46%), Gaps = 54/605 (8%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           +  +     D  +Y  +LQLC  L+++ +G +VH  I  S +  +  V G+ LVFM+   
Sbjct: 53  IIDARDEPFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFV-GNDLVFMYAAF 111

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL--------FK--------KM 189
           G+  E RR+F+ + +  V  +  +M  Y   G+  E+L +        FK         +
Sbjct: 112 GNPGEARRIFDGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAV 171

Query: 190 QSLGIAAD----SYTFSCVLKC---------LAVVG---NSRRVKDAHKLFDELSDR--- 230
           ++ G+  D     +    + +C         ++++G   N   ++ A + FD    R   
Sbjct: 172 EAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPS 231

Query: 231 -DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
            DVVSW  +++    +      L++F  M   G   D    VTVL      G +  G+ +
Sbjct: 232 SDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRI 291

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H+  L     ++      ++ MY++ G +  A R F+++ +  V +WT ++  Y R G F
Sbjct: 292 HSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSF 351

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS---SLYVS 406
           +  +++   M  EG++P+     +IL  C  +  LE GK +     E   +S   S  + 
Sbjct: 352 NSVMQILERMEAEGVKPNEVTFITILDTCK-NLALEDGKKIQALASEQQQRSLDASARIG 410

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFE 455
            A++ M+++  SM  A   F+++  K + ++  MI           AL +F  M+ +   
Sbjct: 411 TAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVA 470

Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
            D + +A  + ACAS+  LE G+ +H   +  G+  D  V  A+VDMY +CG +  A ++
Sbjct: 471 ADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAV 530

Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
           F  I   D ++W+ MIA  G HG    A+A    M+Q G  P   + + VL AC+H+G++
Sbjct: 531 FGEIERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMI 590

Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
           +E  R  + +  +   +   E    ++ + ++ G++ EA    + +   PD   W ++L 
Sbjct: 591 EEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLE 649

Query: 636 G-CRI 639
             CR+
Sbjct: 650 AYCRL 654


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/603 (38%), Positives = 353/603 (58%), Gaps = 35/603 (5%)

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N M+  Y   G + + ++++  M  +G  V+  T   VL  CA+    +FG  VH   ++
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
             F  ++     L+DMY+KCG++  A  VF++M  R VV WT+MI  Y +      A+ L
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220

Query: 356 FRGMVREGIEPDVYAITSILHACAC----DGLLEIGKD--VHDYIKENDMQSSLYVSNAL 409
           FR M  EG   D   IT+I  A A     DG + I +   V D ++E +  S     N++
Sbjct: 221 FRKMQEEGFLGD--EITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISW----NSM 274

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACA 469
           +  Y + G   DA S+FNQM   +                     +P+ VT   ++ AC+
Sbjct: 275 LSGYTQNGRPTDALSLFNQMQASEC--------------------DPNPVTALIMVSACS 314

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD--MIPAKDLISW 527
            L +   GR++H +++   +  D  + NAI+DMY+KCG L  A  +F+   +  +D+ SW
Sbjct: 315 YLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSW 374

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
            ++I+GYG+HG G +A+  F+ M+  G+EP++++F S+L ACSH+GL+DEG + F  M  
Sbjct: 375 NVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT- 433

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
           + ++ P+++HYACMVD+L R G L+EA+R I+ +P  P   +WG+LL  CRIH   +L E
Sbjct: 434 KLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGE 493

Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
             A ++F+LEP++TGYYVL++N+YA + KW+EV+ +R+ +  RGLKK    S IE   +V
Sbjct: 494 IAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEV 553

Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
           + F     S P+ +++   ++ L +EMK  GY P     L + +  +KE  L  HSEKLA
Sbjct: 554 HGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLA 613

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
           +AFGI+ +  G  I+VTKNLRVC DCH   KF+S    R+I++RD NRFHHF+ GRCSC 
Sbjct: 614 VAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCG 673

Query: 828 GFW 830
            +W
Sbjct: 674 DYW 676



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 176/342 (51%), Gaps = 4/342 (1%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           ++  TY  +L++CA       G+ VH  +  +G    D  + + LV M+  CG++ +   
Sbjct: 130 VNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFG-SDLFVEAALVDMYAKCGEIGDAHE 188

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN 213
           VF+++    V  W  ++  Y +     ++L LF+KMQ  G   D  T   V   +  +G+
Sbjct: 189 VFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGD 248

Query: 214 SR-RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
            R  +  A  +FD + +R+ +SWN M+SGY  NG     L +F +M     + +  T + 
Sbjct: 249 GRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALI 308

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE--KMGE 330
           ++S C+  G+   GR +H F + +    + +  N ++DMY KCGDLD A+ +F   ++GE
Sbjct: 309 MVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGE 368

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R V SW  +I+GY   G    A+ LF  M  EG+EP+    TSIL AC+  GL++ G+  
Sbjct: 369 RDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKC 428

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
              + +  ++  +     ++DM  + G + +A  +  ++P +
Sbjct: 429 FADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSR 470



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 233/545 (42%), Gaps = 99/545 (18%)

Query: 99  YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK- 157
           Y  +LQ C  L +L   K +HS +   G ++      ++L+ ++   GDL   R +F+  
Sbjct: 28  YDHLLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHR 84

Query: 158 -------IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA- 209
                        F+ N ++  Y+  G   E++ L+  MQ +G+  +++T+  VLK  A 
Sbjct: 85  HHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS 144

Query: 210 ---------VVGNSRR----------------------VKDAHKLFDELSDRDVVSWNCM 238
                    V G   R                      + DAH++FD +  RDVV W  M
Sbjct: 145 ELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAM 204

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I+ Y       K L +F++M   GF  D  T ++V S     G    GR           
Sbjct: 205 ITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGD---GRMA--------- 252

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
                              +  A  VF++M ER+ +SW SM++GY + G    A+ LF  
Sbjct: 253 -------------------ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQ 293

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M     +P+      ++ AC+  G   +G+ +H+++  + M     + NA+MDMY KCG 
Sbjct: 294 MQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGD 353

Query: 419 MADAESVFN--QMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACIL 465
           +  A  +FN  ++  +D+ SWN +I           AL+LF  M ++  EP+ +T   IL
Sbjct: 354 LDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSIL 413

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
            AC+    ++ GR+    + +  +  +      +VDM  + G L  A  L   IP++   
Sbjct: 414 SACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSD 473

Query: 526 S-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF---ISVLYACSHSGLVDEGWRF 581
             W  ++    +HG         N++ Q  +EP+   +   +S +YA S+       W+ 
Sbjct: 474 EVWGALLLACRIHGNTELGEIAANNLFQ--LEPEHTGYYVLMSNIYAASNK------WKE 525

Query: 582 FNMMR 586
             M+R
Sbjct: 526 VEMVR 530



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 183/402 (45%), Gaps = 35/402 (8%)

Query: 280 CGALMFGRAVHA-FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW-- 336
           C +L   + +H+  + +        F   L+ +YSK GDL  A  +F+            
Sbjct: 35  CTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQA 94

Query: 337 ------TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
                  +M+  YA  G    AI L+  M R G+  + +    +L  CA +     G+ V
Sbjct: 95  PNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVV 154

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAM 450
           H  +      S L+V  AL+DMYAKCG + DA  VF++M ++D+V W  MI   +     
Sbjct: 155 HGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYE----- 209

Query: 451 LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
            Q   P    M            L R  +  G+ L   I+A  +VA+A+  +      + 
Sbjct: 210 -QAERPLKALM------------LFRKMQEEGF-LGDEITAI-SVASAVGQLGDGRMAIS 254

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            AR +FD +  ++ ISW  M++GY  +G   DA++ FN M+ +  +P+ V+ + ++ ACS
Sbjct: 255 RARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACS 314

Query: 571 HSGLVDEGWRFFN-MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP-DAT 628
           + G    G +  N ++  + +I+  L +   ++D+  + G+L  A        +   D +
Sbjct: 315 YLGSKHLGRKLHNFVISSKMDIDTTLRN--AIMDMYMKCGDLDTAVEMFNNCELGERDVS 372

Query: 629 IWGSLLCGCRIHHEVKLAEKVAE--HVFELEPDNTGYYVLLA 668
            W  L+ G  +H   K A ++     V  +EP++  +  +L+
Sbjct: 373 SWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILS 414


>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 556

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 227/573 (39%), Positives = 331/573 (57%), Gaps = 39/573 (6%)

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T   VLS C +  A + G  +H+   K  F  E+   + L+DMY+KC D+  A +VFE+M
Sbjct: 12  TFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEM 71

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
               + + T++                           D  + +S+  ACA  G LE GK
Sbjct: 72  PTLLLENLTAL---------------------------DEVSFSSVFSACANAGNLEFGK 104

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---- 444
            VH    +  + + +Y++N+L DMY KCG   D   +F+    +D+V+WN MI A     
Sbjct: 105 QVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNH 164

Query: 445 -------DLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
                    ++   +   PD  + + +L +CA+LAAL +G  IH  I+R G   +  VA+
Sbjct: 165 NYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVAS 224

Query: 498 AIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEP 557
           +++ MY KCG LV A  +F+    ++++ WT +IA    HG     +  F  M + GI+P
Sbjct: 225 SLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKP 284

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
           D ++F+SVL ACSH+G V+EG+ +FN M     I P  EHYAC+VDLLSR G L  A RF
Sbjct: 285 DYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRF 344

Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
           IE+MP+ PDA++WG+LL  CR H  + + ++VA  +F+LEPDN G YVLL N+       
Sbjct: 345 IELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGML 404

Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
            E  ++R K+   G++K PGCSWI+IK    +F     SH   K+I  +L++L+  +K++
Sbjct: 405 NEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKK 464

Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
           GY  +T +A IN  E  KE +L  HSEK+A+AFG+L+LPAG  IR+ KNLR CGDCH + 
Sbjct: 465 GYVAETEFA-INTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVM 523

Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KF S+   REI++RD NRFHHF +G CSC  +W
Sbjct: 524 KFASEIFAREIIVRDINRFHHFTNGICSCGDYW 556



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 175/365 (47%), Gaps = 22/365 (6%)

Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE---LSDRDVVSWNCMISGYIAN 245
           M+  G+  + YTFS VL        S   +  H L  +   L++  VVS   ++  Y   
Sbjct: 1   MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVS--ALVDMYAKC 58

Query: 246 GVAEKGLEVFKEMLNLGFN----VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
                  +VF+EM  L       +D  +  +V S CAN G L FG+ VH  ALK      
Sbjct: 59  CDMLMAEKVFEEMPTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNL 118

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +  NN+L DMY KCG  +   ++F   G R VV+W  MI  Y     ++ A   F  M R
Sbjct: 119 VYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRR 178

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           +G  PD  + +S+LH+CA    L  G  +H+ I  +    +L V+++L+ MYAKCGS+ D
Sbjct: 179 KGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVD 238

Query: 422 AESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNFEPDGVTMACILPACAS 470
           A  +F +   +++V W  +I A          ++LF  ML +  +PD +T   +L AC+ 
Sbjct: 239 AFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSH 298

Query: 471 LAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWT 528
              +E G      +++ HGI         IVD+  + G L  A+   +++P K D   W 
Sbjct: 299 TGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWG 358

Query: 529 IMIAG 533
            +++ 
Sbjct: 359 ALLSA 363



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 182/391 (46%), Gaps = 34/391 (8%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ ++L  C D  +   G+++HS++ + G + +  V+ S LV M+  C D+    +VF +
Sbjct: 12  TFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVV-SALVDMYAKCCDMLMAEKVFEE 70

Query: 158 IDNGKVFIWNLL-MHEYSKTGNFKE-----SLYLFKKMQSLGIAADSYTFSCVLKCLA-V 210
           +    + + NL  + E S +  F       +L   K++  + +    +    +   L+ +
Sbjct: 71  MPT--LLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDM 128

Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
            G      D  KLF     RDVV+WN MI  Y+ N   E     F  M   G   D A+ 
Sbjct: 129 YGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASY 188

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            +VL  CAN  AL  G  +H   +++ F K +   ++L+ MY+KCG L  A ++FE+  +
Sbjct: 189 SSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETED 248

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KD 389
           R+VV WT++IA   + G  +  + LF  M+REGI+PD     S+L AC+  G +E G   
Sbjct: 249 RNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFY 308

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVA 449
            +  IK + +         ++D+ ++ G +  A+     MP+K                 
Sbjct: 309 FNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIK----------------- 351

Query: 450 MLQNFEPDGVTMACILPACASLAALERGREI 480
                 PD      +L AC + + L  G+E+
Sbjct: 352 ------PDASVWGALLSACRNHSNLIMGKEV 376



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 130/295 (44%), Gaps = 37/295 (12%)

Query: 83  MEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
           M  L     + +D  ++ S+   CA+  +LE GK+VH +  + G V +   + + L  M+
Sbjct: 71  MPTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLG-VWNLVYINNSLSDMY 129

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
             CG   +  ++F+      V  WN+++  Y    N++++   F  M+  G   D  ++S
Sbjct: 130 GKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYS 189

Query: 203 CVLKCLA-------------------VVGNSR-------------RVKDAHKLFDELSDR 230
            VL   A                    V N R              + DA ++F+E  DR
Sbjct: 190 SVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDR 249

Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
           +VV W  +I+    +G A   +E+F++ML  G   D  T V+VLS C++ G +  G    
Sbjct: 250 NVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYF 309

Query: 291 AFALK--ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAG 342
              +K    +     +   ++D+ S+ G+LD A R  E M  +   S W ++++ 
Sbjct: 310 NSMIKVHGIYPGHEHY-ACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSA 363



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 14/248 (5%)

Query: 49  NPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEK--SKIDTKTYCSILQLC 106
           N ++   S T       +N  I  +    N E A    +   +  S  D  +Y S+L  C
Sbjct: 136 NDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSC 195

Query: 107 ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIW 166
           A+L +L  G  +H+ I  SG V +  V  S L+ M+  CG L +  ++F + ++  V  W
Sbjct: 196 ANLAALYQGTLIHNQIIRSGFVKNLRV-ASSLITMYAKCGSLVDAFQIFEETEDRNVVCW 254

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE 226
             ++    + G+    + LF++M   GI  D  TF  VL   +  G   RV++    F+ 
Sbjct: 255 TAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTG---RVEEGFFYFNS 311

Query: 227 LSDRDVV-----SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
           +     +      + C++      G  ++  + F E++ +    D +    +LS C N  
Sbjct: 312 MIKVHGIYPGHEHYACIVDLLSRAGELDRA-KRFIELMPI--KPDASVWGALLSACRNHS 368

Query: 282 ALMFGRAV 289
            L+ G+ V
Sbjct: 369 NLIMGKEV 376


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/619 (37%), Positives = 355/619 (57%), Gaps = 17/619 (2%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           +  R+ VSW  ++SG   N +    L  F  M   G       + +     A  GA + G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
             +H   ++  F  E+   + L DMYSKCG L  A RVF++M ++  V+WT+MI GYA+ 
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 347 GVFDGAIRLFRGMVREG-IEPDVYAITSILHACAC--DGLLEIGKDVHDYIKENDMQSSL 403
           G  + A+  FR M REG +  D +   S+L A     DG L   K +H  + +   +  +
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLS--KSIHCCVTKAGFELEV 178

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIG----------ALDLFVAML- 451
            V NAL+DMYAK   +  A  V    P   ++VS  +MI           AL ++V +  
Sbjct: 179 AVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR 238

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
           Q  EP+  T + ++  CA  A LE+G ++H  +++  +  D  V + +VDMY KCG++ L
Sbjct: 239 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISL 298

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           +  LF+ I  +  I+W  +I  +  HG G +AI  F+ M  +GI P+ ++F+S+L ACSH
Sbjct: 299 SMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSH 358

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           +GLVDEG ++F  M+    IEPK EHY+C++D   R G L EAY+FI  MP+ P+A  W 
Sbjct: 359 AGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWC 418

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           SLL  CR+    +L E  A+++ +LEP NTG +V L+ +YA   +WE+VK +R+ +    
Sbjct: 419 SLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSR 478

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
           +KK PG SW++   K ++F +   SHP  K I   L+ L   +K EGY P T +   N +
Sbjct: 479 IKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLE 538

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           ++ KE  L  HSE++A+AF ++++PA + I V KNLR+C DCH   KF+ K  RR+I++R
Sbjct: 539 DIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVR 598

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           D++RFHHF +GRCSC  +W
Sbjct: 599 DNSRFHHFVNGRCSCGDYW 617



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 163/337 (48%), Gaps = 15/337 (4%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF-NVDLATMVTVLS 275
           + +A ++FD++  +D V+W  MI GY  NG  E  +  F++M   G    D     +VLS
Sbjct: 92  LSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLS 151

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE-KMGERSVV 334
                      +++H    KA F  E++  N L+DMY+K  D++ A RV +   G  +VV
Sbjct: 152 ASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVV 211

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           S TSMI GY      + A+ ++  + R+G+EP+ +  +S++  CA   LLE G  +H  +
Sbjct: 212 SGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQV 271

Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
            + D+    +V + L+DMY KCG ++ +  +FN++  +  ++WN +I           A+
Sbjct: 272 IKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAI 331

Query: 445 DLFVAML-QNFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANAIVDM 502
             F  M+     P+ +    +L AC+    ++ G +  +     HGI       + I+D 
Sbjct: 332 QAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDT 391

Query: 503 YVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
           Y + G L  A      +P K +   W  ++    M G
Sbjct: 392 YGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 428



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 163/346 (47%), Gaps = 36/346 (10%)

Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG 193
           + S L  M+  CG L E  RVF+++       W  ++  Y+K G+ + ++  F+ M+  G
Sbjct: 78  VASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREG 137

Query: 194 -IAADSYTFSCVLK----------------CLAVVGNSRRVKDAHKLFD--------ELS 228
            + AD + F  VL                 C+   G    V   + L D        E +
Sbjct: 138 LVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESA 197

Query: 229 DR---------DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
            R         +VVS   MI GYI     E+ L ++ E+   G   +  T  +++ GCA 
Sbjct: 198 SRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAM 257

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L  G  +HA  +K    ++    +TL+DMY KCG +  ++++F ++  R+ ++W ++
Sbjct: 258 QALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAV 317

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-ND 398
           I  +A+ G    AI+ F  M+  GI P+  A  S+L AC+  GL++ G      +KE + 
Sbjct: 318 INVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHG 377

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           ++      + ++D Y + G + +A    ++MP+K +   W +++GA
Sbjct: 378 IEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 423



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/410 (20%), Positives = 167/410 (40%), Gaps = 91/410 (22%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI---DTKTYCSILQLCADLKSLEDGKKVHSII 122
           + A I  + + G+LE A+      ++  +   D   +CS+L     LK     K +H  +
Sbjct: 110 WTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCV 169

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNL-----LMHEYSKTG 177
            ++G  ++  V  + L+ M+    D++   RV  KID G    WN+     ++  Y +T 
Sbjct: 170 TKAGFELEVAVRNA-LIDMYAKSMDVESASRVL-KIDPGG---WNVVSGTSMIDGYIETD 224

Query: 178 NFKESLYLFKKMQSLGIAADSYTFS-----CVLKCL--------AVVGNSRRVKDAH--- 221
             +E+L ++ +++  G+  + +TFS     C ++ L        A V  +  ++D+    
Sbjct: 225 CVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGS 284

Query: 222 ----------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                           +LF+E+  R  ++WN +I+ +  +G   + ++ F  M+  G   
Sbjct: 285 TLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRP 344

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +    V++L+ C++ G                                    +D  ++ F
Sbjct: 345 NHIAFVSLLTACSHAGL-----------------------------------VDEGLKYF 369

Query: 326 EKMGERSVVS-----WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
             M E   +      ++ +I  Y R G  D A +    M    I+P+ Y   S+L AC  
Sbjct: 370 YSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEM---PIKPNAYGWCSLLGACRM 426

Query: 381 DGLLEIGK-DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
            G  E+G+    + +K     + ++VS  L  +YA  G   D ++V   M
Sbjct: 427 RGSKELGEVAAQNLMKLEPGNTGIHVS--LSGIYASLGQWEDVKAVRKLM 474


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/614 (36%), Positives = 346/614 (56%), Gaps = 13/614 (2%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           R VV+W  +ISG + N      L  F  M       +  T   V    A     M G+ +
Sbjct: 71  RTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQI 130

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H  ALK     ++    +  DMY K G    A  +F++M +R++ +W + I+   ++   
Sbjct: 131 HGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRS 190

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             AI  F+  +    EP+     + L+AC     L +G+ +H +I     +  + V+N L
Sbjct: 191 LDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGL 250

Query: 410 MDMYAKCGSMADAESVFNQM-PVKDIVSWNTMIGALD----------LFVAMLQNFEPDG 458
           +D Y KCG +  AE VFN++   K++VSW +M+ AL           +F+   +  EP  
Sbjct: 251 IDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTD 310

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
             ++ +L ACA L  LE GR +H   ++  +  +  V +A+VDMY KCG +  A  +F  
Sbjct: 311 FMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSE 370

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR--QAGIEPDEVSFISVLYACSHSGLVD 576
           +P ++L++W  MI GY   G    A+  F +M     GI P  V+ IS+L  CS  G V+
Sbjct: 371 LPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVE 430

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            G + F  MR    IEP  EH+AC+VDLL R+G +  AY FI+ M + P  ++WG+LL  
Sbjct: 431 RGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGA 490

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
           CR+H + +L +  AE +FEL+  ++G +V+L+N+ A A +WEE   +R+++   G+KKN 
Sbjct: 491 CRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNV 550

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
           G SWI +K ++++F A  SSH    +I+++L +LR  MK  GY P T  +L + ++ EK 
Sbjct: 551 GYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKA 610

Query: 757 VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
             +  HSEK+A+AFG++ LP G  IR+TKNLR+CGDCH   KF+S+   REI++RD++RF
Sbjct: 611 SEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRF 670

Query: 817 HHFKDGRCSCRGFW 830
           H FKDG CSC+ +W
Sbjct: 671 HRFKDGCCSCKDYW 684



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 224/491 (45%), Gaps = 60/491 (12%)

Query: 96  TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVF 155
             T+CSIL           G+ +H+ I  + +      L + LV M+     L   + V 
Sbjct: 17  VSTHCSIL-----------GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVL 65

Query: 156 NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR 215
           +      V  W  L+        F  +L  F  M+   +  + +TF CV K  A V    
Sbjct: 66  SLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPM 125

Query: 216 RVKDAHKL--------------------------------FDELSDRDVVSWNCMISGYI 243
             K  H L                                FDE+  R++ +WN  IS  +
Sbjct: 126 TGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAV 185

Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
            +  +   +  FKE L +    +  T    L+ C +   L  GR +HAF ++  + +++S
Sbjct: 186 QDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVS 245

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
             N L+D Y KCGD+  A  VF ++G R +VVSW SM+A   +    + A  +F    R+
Sbjct: 246 VANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFL-QARK 304

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
            +EP  + I+S+L ACA  G LE+G+ VH    +  ++ +++V +AL+DMY KCGS+ +A
Sbjct: 305 EVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENA 364

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAML---QNFEPDGVTMACILPACA 469
           E VF+++P +++V+WN MIG          AL LF  M        P  VT+  IL  C+
Sbjct: 365 EQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCS 424

Query: 470 SLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-W 527
            + A+ERG +I   + L +GI         +VD+  + G++  A      +  +  IS W
Sbjct: 425 RVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVW 484

Query: 528 TIMIAGYGMHG 538
             ++    MHG
Sbjct: 485 GALLGACRMHG 495



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 190/381 (49%), Gaps = 16/381 (4%)

Query: 284 MFGRAVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           + GR +HA  ++   +   SF +N L++MYSK   L+ A  V      R+VV+WTS+I+G
Sbjct: 23  ILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISG 82

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
                 F  A+  F  M R+ ++P+ +    +  A A   +   GK +H    +  M   
Sbjct: 83  CVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYD 142

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------ALDLFVAMLQ--- 452
           ++V  +  DMY K G   DA ++F++MP +++ +WN  I        +LD  VA  +   
Sbjct: 143 VFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLC 202

Query: 453 -NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
            + EP+ +T    L AC  +  L  GR++H +I+R G   D +VAN ++D Y KCG +V 
Sbjct: 203 VHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVS 262

Query: 512 ARSLFDMI-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
           A  +F+ I   K+++SW  M+A    +     A   F   R+  +EP +    SVL AC+
Sbjct: 263 AEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACA 321

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
             G ++ G R  + +  +  +E  +   + +VD+  + G++  A +    +P   +   W
Sbjct: 322 ELGGLELG-RSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP-ERNLVTW 379

Query: 631 GSLLCGCRIHHEVKLAEKVAE 651
            +++ G     ++ +A ++ E
Sbjct: 380 NAMIGGYAHQGDIDMALRLFE 400



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 154/380 (40%), Gaps = 83/380 (21%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           ++ T+C+ L  C D+  L  G+++H+ I   G   +D  + + L+  +  CGD+     V
Sbjct: 208 NSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYK-EDVSVANGLIDFYGKCGDIVSAEMV 266

Query: 155 FNKIDNGK-VFIWNLLMHEYSKTGNFKESLYLF----KKMQSLGIAADSYTFSCV----- 204
           FN+I N K V  W  ++    +    + +  +F    K+++       S   +C      
Sbjct: 267 FNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGL 326

Query: 205 -----LKCLAV-----------------VGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
                +  LAV                  G    +++A ++F EL +R++V+WN MI GY
Sbjct: 327 ELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGY 386

Query: 243 IANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
              G  +  L +F+EM   + G      T++++LS C+  GA+  G              
Sbjct: 387 AHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERG-------------- 432

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMG-----ERSVVSWTSMIAGYAREGVFDGAIRL 355
                                I++FE M      E     +  ++    R G+ D A   
Sbjct: 433 ---------------------IQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEF 471

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND-MQSSLYVSNALMDMYA 414
            + M    I+P +    ++L AC   G  E+GK   + + E D + S  +V   L +M A
Sbjct: 472 IQNM---AIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHV--VLSNMLA 526

Query: 415 KCGSMADAESVFNQMPVKDI 434
             G   +A  V  +M  KDI
Sbjct: 527 SAGRWEEATVVRKEM--KDI 544


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/686 (35%), Positives = 381/686 (55%), Gaps = 29/686 (4%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+   ++  + +  + L   +  LG  +D+   + ++   A  G   ++  A ++FD + 
Sbjct: 10  LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCG---KLHMAGEVFDGMP 66

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           +R+VVSW  ++ G++ +G A + L +F EM   G + +  T+   L  C   G    G  
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQ 124

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H   ++  F       N+L+ MYSK      A RVF+ +  R++ +W SMI+GYA  G 
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184

Query: 349 FDGAIRLFRGMVREGIE-PDVYAITSILHACACDGLLEIGKDVHDY--IKENDMQSSLYV 405
              ++ +FR M R   E PD +   S+L AC+  G    G  VH    ++     S+  +
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAIL 244

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNF----- 454
           + AL+D+Y KC  +  A  VF+ +  ++ + W T+I      G +   + + + F     
Sbjct: 245 AGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGV 304

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
             DG  ++ ++   A  A +E+G+++H Y  +     D +VAN++VDMY+KCG+   A  
Sbjct: 305 RADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGR 364

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
            F  +PA++++SWT MI G G HG G +AI  F +M+  G+E DEV+++++L ACSHSGL
Sbjct: 365 RFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGL 424

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           VDE  R+F+ +  +  + PK EHYACMVDLL R G L EA   I  MP+ P   +W +LL
Sbjct: 425 VDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLL 484

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             CR+H +V +  +V + +  ++ DN   YV+L+N+ AEA +W E + +R  + R+GL+K
Sbjct: 485 SACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRK 544

Query: 695 NPGCSWIEIKGKVNIFVAGG-SSHPHAKKIESLLKRLRLEMK-REGYFPKTRYALINADE 752
             GCSW E+  +V+ F  GG  +HP A  I   L+ +   M+ R GY    R AL + DE
Sbjct: 545 QGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDE 604

Query: 753 MEKEVALCGHSEKLAMAFGILN--------LPAGQTIRVTKNLRVCGDCHEMAKFMSKTA 804
             +  +L  HSE+LA+   +L            G+ +RV KNLRVCGDCHE  K +S   
Sbjct: 605 ESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVV 664

Query: 805 RREIVLRDSNRFHHFKDGRCSCRGFW 830
           RR +V+RD+NRFH F++G CSCR +W
Sbjct: 665 RRVVVVRDANRFHRFQNGACSCRDYW 690



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 223/492 (45%), Gaps = 57/492 (11%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           +    +L+  A   SL  G ++H+ + + G    D +L + L+ M+  CG L     VF+
Sbjct: 5   RMIADLLRASARGSSLRGGVQLHAALMKLGFG-SDTMLNNNLIDMYAKCGKLHMAGEVFD 63

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA------- 209
            +    V  W  LM  +   G  +E L LF +M+  G + + +T S  LK          
Sbjct: 64  GMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGV 123

Query: 210 ---------------VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
                          VV NS        R   DA ++FD +  R++ +WN MISGY   G
Sbjct: 124 QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183

Query: 247 VAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVH-AFALKACF-SKEIS 303
                L VF+EM        D  T  ++L  C+  GA   G  VH A A++    +    
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
               LLD+Y KC  L  A++VF+ +  R+ + WT++I G+A+EG    A+ LFR     G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           +  D + ++S++   A   L+E GK VH Y  +      + V+N+L+DMY KCG   +A 
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 363

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLA 472
             F +MP +++VSW  MI           A+DLF  M  +  E D V    +L AC+   
Sbjct: 364 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSG 423

Query: 473 ALERGREIHGYILRHGISADRNVANA------IVDMYVKCGVLVLARSLFDMIPAKDLIS 526
            ++  R    Y  R  I  DR +         +VD+  + G L  A+ L   +P +  + 
Sbjct: 424 LVDECRR---YFSR--ICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVG 478

Query: 527 -WTIMIAGYGMH 537
            W  +++   +H
Sbjct: 479 VWQTLLSACRVH 490



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 113/220 (51%), Gaps = 14/220 (6%)

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           I  +L A A    L  G  +H  + +    S   ++N L+DMYAKCG +  A  VF+ MP
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 431 VKDIVSWNT-MIG---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGRE 479
            +++VSW   M+G          L LF  M      P+  T++  L AC        G +
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQ 124

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           IHG  +R G      VAN++V MY K      AR +FD+IP+++L +W  MI+GY   G 
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184

Query: 540 GCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEG 578
           G D++  F +M R+   +PDE +F S+L ACS  G   EG
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREG 224



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 126/275 (45%), Gaps = 20/275 (7%)

Query: 77  GNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G +++AM +   + S   + D     S++ + AD   +E GK+VH    ++   +D  V 
Sbjct: 287 GQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVA 346

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
            S LV M++ CG   E  R F ++    V  W  +++   K G+ +E++ LF++MQ+ G+
Sbjct: 347 NS-LVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGV 405

Query: 195 AADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL-SDRDVVS----WNCMISGYIANGVAE 249
            AD   +   L  L+   +S  V +  + F  +  DR +      + CM+      G A 
Sbjct: 406 EADEVAY---LALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLL---GRAG 459

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF---NN 306
           +  E  + +L++     +    T+LS C     +  GR V    L       +++   +N
Sbjct: 460 ELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSN 519

Query: 307 TLLDM--YSKCGDLDGAIRVFEKMGERSVVSWTSM 339
            L +   + +C  + GA+R  + + ++   SWT +
Sbjct: 520 ILAEAGEWRECQGIRGAMR-RKGLRKQGGCSWTEV 553


>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 220/562 (39%), Positives = 338/562 (60%), Gaps = 20/562 (3%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           V+  C       FG  VH   +K+ F  +    N+L+ +Y+   DL  A ++F    +R 
Sbjct: 6   VIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRD 65

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           VVSW +MI GY + G       +F  MV      DV +  +I++  A  G ++  K + D
Sbjct: 66  VVSWNAMIDGYVKRGEMGHTRMVFDRMVCR----DVISWNTIINGYAIVGKIDEAKRLFD 121

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
            + E ++ S     N+++  + KCG++ +A  +F++MP +D+VSWN+M+           
Sbjct: 122 EMPERNLVSW----NSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNE 177

Query: 443 ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           AL LF  M     +P   T+  +L ACA L AL++G  +H YI  + I  +  V  A+VD
Sbjct: 178 ALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVD 237

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KCG + LA  +F+ + +KD+++W  +IAG  +HG   +A   F +M++A +EP++++
Sbjct: 238 MYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDIT 297

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           F+++L ACSH+G+VDEG +  + M     IEPK+EHY C++DLL+R G L EA   I  M
Sbjct: 298 FVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTM 357

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P+ P+ +  G+LL GCRIH   +L E V + +  L+P ++G Y+LL+N+YA A+KW++ +
Sbjct: 358 PMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDAR 417

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE-GYF 740
           K+R  +   G+ K PG S IE+KG V+ FVAG  SHP + KI   L  +   +K   GY 
Sbjct: 418 KVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAIGYS 477

Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
             T   L++ +E +KE AL  HSEKLA+A+G+L+L + + IR+ KNLRVC DCH + K +
Sbjct: 478 ADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLI 537

Query: 801 SKTARREIVLRDSNRFHHFKDG 822
           SK   REI++RD NRFHHF+DG
Sbjct: 538 SKVYGREIIVRDRNRFHHFEDG 559



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 183/362 (50%), Gaps = 16/362 (4%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D+    S++ L A+ K L   K++ S+  +  +V  + ++       +V  G++   R V
Sbjct: 34  DSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDG-----YVKRGEMGHTRMV 88

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
           F+++    V  WN +++ Y+  G   E+  LF +M    + + +   S  +KC    GN 
Sbjct: 89  FDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKC----GN- 143

Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
             V++A  LF E+  RDVVSWN M++ Y   G   + L +F +M  +G     AT+V++L
Sbjct: 144 --VEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 201

Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
           S CA+ GAL  G  +H +               L+DMY+KCG +  A +VF  M  + V+
Sbjct: 202 SACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 261

Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           +W ++IAG A  G    A +LF+ M    +EP+     ++L AC+  G+++ G+ + D +
Sbjct: 262 AWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCM 321

Query: 395 KEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQN 453
             +  ++  +   + ++D+ A+ G + +A  +   MP++   S    +GAL     +  N
Sbjct: 322 SSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPS---ALGALLGGCRIHGN 378

Query: 454 FE 455
           FE
Sbjct: 379 FE 380



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 10/176 (5%)

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
           +T   ++ AC   +    G  +H ++++ G   D  + N+++ +Y     L  A+ LF +
Sbjct: 1   MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
              +D++SW  MI GY   G        F+ M    +  D +S+ +++   +  G +DE 
Sbjct: 61  CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM----VCRDVISWNTIINGYAIVGKIDEA 116

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
            R F+ M      E  L  +  M+    + GN+ EA+     MP   D   W S+L
Sbjct: 117 KRLFDEMP-----ERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCR-DVVSWNSML 166


>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
 gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/538 (39%), Positives = 323/538 (60%), Gaps = 15/538 (2%)

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVS---WTSMIAGYAREGVFDGAIRLFRGMVREGI 364
           L+ ++S C  LD A ++F+ + + S+++   W +M  GY+R G    A+ ++  M+   I
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           EP  ++I+  L AC     L +G+ +H  I +   +    V N L+ +Y + G   DA  
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292

Query: 425 VFNQMPVKDIVSWNTMIGAL----------DLFVAMLQNFEP-DGVTMACILPACASLAA 473
           VF+ M  +++V+WN++I  L          +LF  M +        T+  ILPAC+ +AA
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA 352

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           L  G+EIH  IL+     D  + N+++DMY KCG +  +R +FD++  KDL SW IM+  
Sbjct: 353 LLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 412

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           Y ++G   + I  F  M ++G+ PD ++F+++L  CS +GL + G   F  M+ E  + P
Sbjct: 413 YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 472

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            LEHYAC+VD+L R G + EA + IE MP  P A+IWGSLL  CR+H  V + E  A+ +
Sbjct: 473 ALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKEL 532

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
           F LEP N G YV+++N+YA+A+ W+ V K+RE + +RG+KK  GCSW+++K K+ IFVAG
Sbjct: 533 FVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592

Query: 714 GS-SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G     ++ + + +   L+  +++ GY P T   L + DE  K   +CGHSE+LA  + +
Sbjct: 593 GGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSL 652

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           ++   G  IR+TKNLRVC DCH   K +S+  RR IVLRD+ RFHHF DG CSC+ +W
Sbjct: 653 IHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 180/387 (46%), Gaps = 37/387 (9%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + Y  +L  C   KSL  G K+ S+I  +  +  +  L SKL+ +F  C  L   R++F+
Sbjct: 132 EAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFD 191

Query: 157 KIDNGKVF---IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------ 207
            + +  +    +W  +   YS+ G+ +++L ++  M    I   +++ S  LK       
Sbjct: 192 DVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKD 251

Query: 208 --------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
                                     L +   S    DA K+FD +S+R+VV+WN +IS 
Sbjct: 252 LRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISV 311

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
                   +   +F++M         AT+ T+L  C+   AL+ G+ +HA  LK+    +
Sbjct: 312 LSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +   N+L+DMY KCG+++ + RVF+ M  + + SW  M+  YA  G  +  I LF  M+ 
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMA 420
            G+ PD     ++L  C+  GL E G  + + +K E  +  +L     L+D+  + G + 
Sbjct: 432 SGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIK 491

Query: 421 DAESVFNQMPVKDIVS-WNTMIGALDL 446
           +A  V   MP K   S W +++ +  L
Sbjct: 492 EAVKVIETMPFKPSASIWGSLLNSCRL 518



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 136/313 (43%), Gaps = 38/313 (12%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           L+ C DLK L  G+ +H+ I +    +D  V+ + L+ +++  G   + R+VF+ +    
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQ-VVYNVLLKLYMESGLFDDARKVFDGMSERN 301

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV----------- 211
           V  WN L+   SK     E   LF+KMQ   I     T + +L   + V           
Sbjct: 302 VVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHA 361

Query: 212 ---------------------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
                                G    V+ + ++FD +  +D+ SWN M++ Y  NG  E+
Sbjct: 362 QILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEE 421

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF--SKEISFNNTL 308
            + +F+ M+  G   D  T V +LSGC++ G   +G ++    +K  F  S  +     L
Sbjct: 422 VINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFE-RMKTEFRVSPALEHYACL 480

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAGYAREG-VFDGAIRLFRGMVREGIEP 366
           +D+  + G +  A++V E M  +   S W S++      G V  G I      V E   P
Sbjct: 481 VDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNP 540

Query: 367 DVYAITSILHACA 379
             Y + S ++A A
Sbjct: 541 GNYVMVSNIYADA 553



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 5/134 (3%)

Query: 72  RFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDD 131
           R  E+ NL + M+     E       T  +IL  C+ + +L  GK++H+ I +S    D 
Sbjct: 317 RVHEMFNLFRKMQ----EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDV 372

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
            +L S L+ M+  CG+++  RRVF+ +    +  WN++++ Y+  GN +E + LF+ M  
Sbjct: 373 PLLNS-LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431

Query: 192 LGIAADSYTFSCVL 205
            G+A D  TF  +L
Sbjct: 432 SGVAPDGITFVALL 445


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 225/614 (36%), Positives = 350/614 (57%), Gaps = 15/614 (2%)

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL--SGCANCGALMFGRAV 289
           VVS+   ISG   +      L  F  ML +G   +  T  +    + CA       G  +
Sbjct: 76  VVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQI 135

Query: 290 HAFALKACFSKEISFNN-TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           HA AL+  +     F +   +DMY K G L  A R+FE+M  R+V++W +++     +G 
Sbjct: 136 HALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGR 195

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
                + + G+   G  P+V ++ +  +ACA    L +G+  H ++        + VSNA
Sbjct: 196 PLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNA 255

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFV-AMLQNFEPD 457
           ++D Y KC     A +VF+ M V++ VSW +MI           AL +++ A     EP 
Sbjct: 256 MVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPT 315

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
              ++ +L  CA L  L  GR +H   +R  I A+  VA+A+VDMY KCG +  A  +F 
Sbjct: 316 DFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFL 375

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVD 576
            +P ++L++W  MI GY   G   +A+A F+ M R  G  P+ ++ ++V+ ACS  GL  
Sbjct: 376 DMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTK 435

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           +G+  F+ MR    +EP+ EHYAC+VDLL R G    AY  I+ MP+ P  ++WG+LL  
Sbjct: 436 DGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGA 495

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
           C++H + +L    +E +FEL+P ++G +VLL+N+ A A +W E   +R+++   G+KK P
Sbjct: 496 CKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEP 555

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
           GCSWI  K  V++F A  + H    +I++LL +L+ +M+  GY P T+Y+L + +E EKE
Sbjct: 556 GCSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKE 615

Query: 757 VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
             +  HSEKLA+AFG++++P    IR+TKNLR+C DCH   KF+S    REI++RD+NRF
Sbjct: 616 TEVFQHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRF 675

Query: 817 HHFKDGRCSCRGFW 830
           H+FK   CSC+ +W
Sbjct: 676 HYFKQFECSCKDYW 689



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 174/336 (51%), Gaps = 20/336 (5%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL---GFNVDLATMVTVLSG 276
           A +LF+E+ +R+V++WN +++  + +G   + LE FK    L   G   ++ ++    + 
Sbjct: 168 ARRLFEEMPNRNVIAWNAVMTNAVIDG---RPLETFKAYFGLREAGGMPNVVSVCAFFNA 224

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA    L  G   H F +   F  ++S +N ++D Y KC     A  VF+ M  R+ VSW
Sbjct: 225 CAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSW 284

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            SMI  YA+ G  + A+ ++ G    G EP  + ++S+L  CA    L  G+ +H     
Sbjct: 285 CSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVR 344

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           + + ++++V++AL+DMY KCG + DAE VF  MP +++V+WN MIG          AL +
Sbjct: 345 SCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAV 404

Query: 447 FVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMY 503
           F AM+++    P+ +T+  ++ AC+     + G E+   +  R G+         +VD+ 
Sbjct: 405 FDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLL 464

Query: 504 VKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
            + G+   A  +   +P +  IS W  ++    MHG
Sbjct: 465 GRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHG 500



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 169/375 (45%), Gaps = 39/375 (10%)

Query: 106 CADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI 165
           CA  +    G ++H++    G +  D  +    + M+   G L   RR+F ++ N  V  
Sbjct: 123 CAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIA 182

Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQ------------------------SLGIAADSYTF 201
           WN +M      G   E+   +  ++                        SLG     +  
Sbjct: 183 WNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVV 242

Query: 202 SCVLKCLAVVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLE 253
           +C       V N+        R    A  +FD +  R+ VSW  MI  Y  +G  E  L 
Sbjct: 243 TCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALA 302

Query: 254 VFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           V+    N G       + +VL+ CA    L FGRA+HA A+++C    I   + L+DMY 
Sbjct: 303 VYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYG 362

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAIT 372
           KCG ++ A +VF  M ER++V+W +MI GYA  G    A+ +F  M+R  G  P+   + 
Sbjct: 363 KCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLV 422

Query: 373 SILHACACDGLLEIGKDVHDYIKEN---DMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
           +++ AC+  GL + G ++ D ++E    + ++  Y    ++D+  + G    A  +  +M
Sbjct: 423 NVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYA--CVVDLLGRAGMEERAYEIIQRM 480

Query: 430 PVKDIVS-WNTMIGA 443
           P++  +S W  ++GA
Sbjct: 481 PMRPSISVWGALLGA 495



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 172/368 (46%), Gaps = 19/368 (5%)

Query: 285 FGRAVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
            GRA HA AL+        F    L+++YSK      A          +VVS+T+ I+G 
Sbjct: 27  LGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGA 86

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL--EIGKDVHDY-IKENDMQ 400
           A+      A+  F  M+R G+ P+ +   S   A AC       +G  +H   ++   + 
Sbjct: 87  AQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLP 146

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE----- 455
              +VS A MDMY K G +  A  +F +MP +++++WN ++    +    L+ F+     
Sbjct: 147 GDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGL 206

Query: 456 ------PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
                 P+ V++     ACA    L  G + HG+++  G   D +V+NA+VD Y KC   
Sbjct: 207 REAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCA 266

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             AR++FD +  ++ +SW  MI  Y  HG   DA+A +   R  G EP +    SVL  C
Sbjct: 267 GKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTC 326

Query: 570 SHSGLVDEGW-RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
             +GL+   + R  + +     I+  +   + +VD+  + G + +A +    MP   +  
Sbjct: 327 --AGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMP-ERNLV 383

Query: 629 IWGSLLCG 636
            W +++ G
Sbjct: 384 TWNAMIGG 391



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 14/195 (7%)

Query: 73  FCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSIICESGIVID 130
           + + G  E A+ V   +  +  +   +   S+L  CA L  L  G+ +H++   S   ID
Sbjct: 291 YAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRS--CID 348

Query: 131 DGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
             + + S LV M+  CG +++  +VF  +    +  WN ++  Y+  G+ + +L +F  M
Sbjct: 349 ANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAM 408

Query: 190 -QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGYI 243
            +S G + +  T   V+   +  G +   KD ++LFD + +R  V      + C++    
Sbjct: 409 IRSGGTSPNHITLVNVITACSRGGLT---KDGYELFDTMRERFGVEPRTEHYACVVDLLG 465

Query: 244 ANGVAEKGLEVFKEM 258
             G+ E+  E+ + M
Sbjct: 466 RAGMEERAYEIIQRM 480


>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Brachypodium distachyon]
          Length = 851

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 257/833 (30%), Positives = 404/833 (48%), Gaps = 107/833 (12%)

Query: 85  VLYSSEKSKIDTKTYCSILQLCADLKSLED-------------GKKVHSIICESGIVIDD 131
           V   S  S  D +   S+L+ C D+  L++               ++HS+   +G    +
Sbjct: 39  VAADSPSSFRDARLLLSLLRQCGDMICLDEEDTGSSLRAARRLAPQLHSLAVRAGHATRE 98

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK----VFIWNLLMHEYSKTGNFKESLYLFK 187
             +   L  +    G     RR+  + D  +      +WN  +   ++ G + E++  F+
Sbjct: 99  PRVACALSDLLARLGRGPSSRRLLEEADESEGGKDAVLWNKQVAMLAEAGEWDEAIGAFR 158

Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVK------------DAHKL--------FDEL 227
           +MQ+ G+AAD Y  + VL         R  K            DAH L        + E 
Sbjct: 159 EMQARGVAADGYALARVLHACGRAAARREGKAVHAHALKAGLVDAHPLVPGFLAGMYAEG 218

Query: 228 SDRDV--------------VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
           +D                 V+W+ +++  +  G+ +  +E+   M   G    LAT   V
Sbjct: 219 ADVAAATAVLLRATPPPRSVAWDAVVACCVRLGLVDDAMELAGRMARDGPEPTLATWNAV 278

Query: 274 LSGC-----------------------------------ANCGALMFGRAVHAFALKACF 298
           LSGC                                   AN G +  G  VH F L+   
Sbjct: 279 LSGCARHGRDREALAVLRRMLEQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGL 338

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
             +      L+DMY+KCG LD A RVF+ +  R++ +W S++AG+A  G F+ A+ L   
Sbjct: 339 VPDAYTGTALVDMYAKCGRLDCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVER 398

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M R  ++P+V     ++   + +GL      +   IK   +  ++    +L+      G 
Sbjct: 399 MKRNRLDPNVTTWNGLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGE 458

Query: 419 MADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGR 478
             D+ + F +M  KD V                   +P  VTM  +L ACA LA L++G+
Sbjct: 459 YEDSFNFFKEMQ-KDGV-------------------QPSLVTMLVLLRACAGLALLKKGK 498

Query: 479 EIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
           E+H + LR     D  V  A++DMY K G L  A+ +F  I  K+L+    M+ G  +HG
Sbjct: 499 ELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHG 558

Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
              +AI  F+D+ ++G++PD ++F ++L AC   GL+ EGW +F+ M  +  + P  E+Y
Sbjct: 559 QSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENY 618

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEP 658
           ACMVDLL+R+G L EA   IE  PV P A++WG+LL GC IH  + LAE  A ++F LEP
Sbjct: 619 ACMVDLLARSGYLDEAMALIERSPVDPGASLWGALLTGCSIHGNLDLAEVAARNLFRLEP 678

Query: 659 DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHP 718
            N+  Y+++ ++Y   + ++E   L+  +  RG+   PG SWI+I+  +++F   GS HP
Sbjct: 679 YNSANYLMIMSLYEHEQMYDEADSLKYAMKARGVNTRPGWSWIQIEQGIHVFEVDGSPHP 738

Query: 719 HAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAG 778
              +I   L  L  ++K  GY P T   + N  E EKE  L  H+EKLA+ +G+++  A 
Sbjct: 739 ETAEICEELMSLVRQIKMTGYVPDTSCVVYNVPEEEKEKLLLCHTEKLAITYGLIHSDAS 798

Query: 779 Q-TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +  +RV KN R+C DCHE+AK +S    R+I+LRD+ RFHHF DG CSC  +W
Sbjct: 799 RMPVRVIKNTRMCSDCHEVAKHISALCGRQIILRDAVRFHHFVDGNCSCNDYW 851


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/765 (31%), Positives = 392/765 (51%), Gaps = 62/765 (8%)

Query: 22  YGKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEK 81
           + + ++  KPS  P I S+ S    T + I        +CK  +Y   +          +
Sbjct: 101 FRRMYSYVKPSLQPAIFSNLSKELPTNSYI------IFLCKQHHYKEAL----------E 144

Query: 82  AMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM 141
           A +    +  S  +  TY S++  CA+ +SL+  KK+H  + +S       +L + ++ M
Sbjct: 145 AFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQ-PSIILQNHMINM 203

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           +  CG +K+ R+VF+ +    V  W  ++  YS+ G   +++ ++ +M   G   D  TF
Sbjct: 204 YGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTF 263

Query: 202 SCVLKCLAVVG--------------------------------NSRRVKDAHKLFDELSD 229
             V+K   + G                                N  +++ A  +F  +  
Sbjct: 264 GSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPT 323

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRA 288
           +D++SW  MI+GYI  G   + L +F+++L  G +  +     +V S C++   L +G+ 
Sbjct: 324 KDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQ 383

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           VH   +K    + +    +L DMY+K G L  A   F ++    +VSW ++IA +A  G 
Sbjct: 384 VHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGD 443

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
            + AI  FR M+  G+ PD     S+L  C     L  G+ +H YI +      + V N+
Sbjct: 444 ANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNS 503

Query: 409 LMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA----------LDLFVAM-LQNFEP 456
           L+ MY KC  + DA +VF  +    ++VSWN ++ A            L+  M     +P
Sbjct: 504 LLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKP 563

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           D +T+  +L  CA L +L  G ++H Y ++ G+  D +V N ++DMY KCG L  AR +F
Sbjct: 564 DSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVF 623

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           D     D++SW+ +I GY   G G +A+  F  M   G++P+EV+++  L ACSH GLV+
Sbjct: 624 DSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVE 683

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           EGWR +  M  E  I P  EH++C+VDLL+R G L EA  FI+   +  D T W +LL  
Sbjct: 684 EGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAA 743

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
           C+ H+ V +AE+ A ++ +L+P N+   V+L N++A A  WEEV KLR+ + + G++K P
Sbjct: 744 CKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVP 803

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           G SWIE+K K +IF +  SSHP    I ++L+ L  ++  +GY P
Sbjct: 804 GQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDP 848


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 245/737 (33%), Positives = 392/737 (53%), Gaps = 53/737 (7%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF-KKMQSLGIAADSYTFSC- 203
           GD  + RR+ +++       +NLL+  YS+ G  +ESL  F    ++  + AD +T++  
Sbjct: 61  GDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAA 120

Query: 204 --------------VLKCLAV---------VGNS-----RRVKD---AHKLFDELSDRDV 232
                         V+  LAV         V NS      R  D   A ++FD   +RD 
Sbjct: 121 LAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDD 180

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG--RAVH 290
           VSWN ++SGY+  G  E+ L VF  M      ++   + +V+  C+     + G   AVH
Sbjct: 181 VSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVH 240

Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG--- 347
              +KA    ++   + ++DMY+K G L  A+ +F+ + + +VV + +MIAG  R+    
Sbjct: 241 GCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAV 300

Query: 348 ---VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
              V   A+ L+  +   G+EP  +  +S++ AC   G +E GK +H  + ++  Q   +
Sbjct: 301 HKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDF 360

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-N 453
           + +AL+D+Y     M D    F  +P +D+V+W  MI           AL LF  +L   
Sbjct: 361 IGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVG 420

Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
            +PD  T++ ++ ACASLA +  G ++  +  + G      + N+ + MY + G +  A 
Sbjct: 421 LKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAI 480

Query: 514 SLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
             F  + + D++SW+ +I+ +  HG    A+  FN+M  A + P+E++F+ VL ACSH G
Sbjct: 481 QRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGG 540

Query: 574 LVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
           LVDEG R++ +M+ E  + P ++H  C+VDLL R G L++A  FI       +  +W SL
Sbjct: 541 LVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSL 600

Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
           L  CRIH +++  + VA+ + EL+P ++G YV L N+Y +A +     K+R+ +  RG+K
Sbjct: 601 LGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVK 660

Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
           K PG SWIE++  ++ FVAG  SHP    I + L  +  ++ +      +    +     
Sbjct: 661 KEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKIDKLTTTDTSCIEWVETTGR 720

Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
           E+    C HSEKLA+A GI++LP    IRV KNLRVC DCH   K +SK+  REI+LRD 
Sbjct: 721 EQNWMNC-HSEKLAVALGIIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSECREIILRDV 779

Query: 814 NRFHHFKDGRCSCRGFW 830
            RFHHF+DG CSC  +W
Sbjct: 780 IRFHHFRDGSCSCGDYW 796



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/530 (24%), Positives = 240/530 (45%), Gaps = 59/530 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           ++N  I  +   G  E+++E    + ++   K D  TY + L  C+    L++GK VH++
Sbjct: 80  SFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHAL 139

Query: 122 ICESGIVIDDGVLGSK-LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
               G+   +GV  S  LV M+  CGD+ E RRVF+  +      WN L+  Y + G  +
Sbjct: 140 AVLEGLA--EGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHE 197

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------------------------ 216
           E L +F  M+   +  +S+    V+KC +    S R                        
Sbjct: 198 EMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASA 257

Query: 217 ----------VKDAHKLFDELSDRDVVSWNCMISGY------IANGVAEKGLEVFKEMLN 260
                     + +A  LF  + D +VV +N MI+G       +   V  + L ++ E+ +
Sbjct: 258 MVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQS 317

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
            G      T  +V+  C   G + FG+ +H   LK CF  +    + L+D+Y     ++ 
Sbjct: 318 RGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMED 377

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
             R F  + ++ VV+WT+MI+G  +  +F+ A+ LF  ++  G++PD + I+S+++ACA 
Sbjct: 378 GFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACAS 437

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
             ++  G+ +  +  ++       + N+ + MYA+ G++  A   F +M   D+VSW+ +
Sbjct: 438 LAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAI 497

Query: 441 IG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYI-LRHG 488
           I           AL  F  M+     P+ +T   +L AC+    ++ G   +  + + +G
Sbjct: 498 ISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYG 557

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYGMH 537
           +         +VD+  + G L  A +   D I   + + W  ++    +H
Sbjct: 558 LCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIH 607



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 183/381 (48%), Gaps = 24/381 (6%)

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK--CGDLDGAIRVFEKMGERSVVSW 336
           +C +L    AVH    +A  S  +   NTLL  Y +   GD   A R+ ++M  R+ VS+
Sbjct: 22  SCASLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSF 81

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
             +I  Y+R G  + ++  F    R   ++ D +   + L AC+  G L+ GK VH    
Sbjct: 82  NLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAV 141

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LD 445
              +   ++VSN+L+ MYA+CG M +A  VF+    +D VSWN+++            L 
Sbjct: 142 LEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLR 201

Query: 446 LFVAMLQ-NFEPDGVTMACILPACASLAALERG--REIHGYILRHGISADRNVANAIVDM 502
           +F  M +     +   +  ++  C+      RG    +HG +++ G+  D  +A+A+VDM
Sbjct: 202 VFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDM 261

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC------DAIATFNDMRQAGIE 556
           Y K G L  A +LF  +   +++ +  MIAG              +A++ +++++  G+E
Sbjct: 262 YAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGME 321

Query: 557 PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           P E +F SV+ AC+ +G ++ G +    +   C         A ++DL   +  + + +R
Sbjct: 322 PTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSA-LIDLYFNSACMEDGFR 380

Query: 617 FIEMMPVAPDATIWGSLLCGC 637
               +P   D   W +++ GC
Sbjct: 381 CFRSVP-KQDVVTWTAMISGC 400



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/346 (20%), Positives = 141/346 (40%), Gaps = 54/346 (15%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+ S+++ C     +E GK++H  + +     DD  +GS L+ ++     +++G R F  
Sbjct: 326 TFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDD-FIGSALIDLYFNSACMEDGFRCFRS 384

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK----------- 206
           +    V  W  ++    +   F+ +L LF ++  +G+  D +T S V+            
Sbjct: 385 VPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTG 444

Query: 207 ---------------------CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                                C+ +   S  V+ A + F E+   DVVSW+ +IS +  +
Sbjct: 445 EQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQH 504

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISF 304
           G A + L+ F EM+      +  T + VL+ C++ G +  G R      ++      +  
Sbjct: 505 GCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKH 564

Query: 305 NNTLLDMYSKCGDL-DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
              ++D+  + G L D    + + +     V W S++          G+ R+ R M R  
Sbjct: 565 CTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLL----------GSCRIHRDMERGQ 614

Query: 364 IEPD-VYAITSILHACACD--------GLLEIGKDVHDYIKENDMQ 400
           +  D +  +      C  +        G L +G  + D +KE  ++
Sbjct: 615 LVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVK 660


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/733 (33%), Positives = 411/733 (56%), Gaps = 46/733 (6%)

Query: 60  VCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKK 117
           +C    +N  I     +G  + A+   +    S +  D  T+  +++ C  L ++     
Sbjct: 107 LCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMV 166

Query: 118 VHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTG 177
           VH+     G  +D  V GS L+ ++   G + + RRVF+++      +WN+++H Y K+G
Sbjct: 167 VHNTARSLGFHVDLFV-GSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSG 225

Query: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLK--------CLA------VVGNSRRVK----- 218
           +F  ++  F  M++     +S T++C+L         CL       V+G+          
Sbjct: 226 DFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVAN 285

Query: 219 -------------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
                        DA KLF+ +   D V+WN +I+GY+ NG  ++   +F  M++ G   
Sbjct: 286 TLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKP 345

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           D  T  + L      G+L   + VH++ ++     ++   + L+D+Y K GD++ A ++F
Sbjct: 346 DSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIF 405

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++     V   T+MI+GY   G+   AI  FR +++EG+ P+   + S+L ACA    L+
Sbjct: 406 QQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALK 465

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
           +GK++H  I +  +++ + V +A+ DMYAKCG +  A   F +M   D + WN+MI    
Sbjct: 466 LGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFS 525

Query: 443 -------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
                  A+DLF  M +   + D V+++  L + A+L AL  G+E+HGY++R+  S+D  
Sbjct: 526 QNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTF 585

Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
           VA+A++DMY KCG L LAR +F+++  K+ +SW  +IA YG HG   + +  F++M +AG
Sbjct: 586 VASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAG 645

Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
           + PD V+F+ ++ AC H+GLV EG  +F+ M  E  I  ++EHYACMVDL  R G L EA
Sbjct: 646 VHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEA 705

Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
           +  I+ MP  PDA +WG+LL  CR+H  V+LA+  + H+ EL+P N+GYYVLL+NV+A+A
Sbjct: 706 FDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADA 765

Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
            +W  V K+R  +  +G++K PG SWI++ G  ++F A   +HP + +I  +L  L LE+
Sbjct: 766 GEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAEGNHPESVEIYLILNSLLLEL 825

Query: 735 KREGYFPKTRYAL 747
           +++GY P+    L
Sbjct: 826 RKQGYVPQPYLPL 838



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 246/515 (47%), Gaps = 49/515 (9%)

Query: 92  SKIDTKTYC-----SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG 146
           SK +T+ Y      S+ + C+D   ++  ++VH+ I   G+  D   L S+++ ++V CG
Sbjct: 35  SKPETQDYLTTQLESLFRACSDASVVQQARQVHTQIIVGGMS-DVCALSSRVLGLYVLCG 93

Query: 147 DLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK 206
            + +G  +F  ++      WN ++      G F  +L  + KM    ++ D YTF  V+K
Sbjct: 94  RISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIK 153

Query: 207 ----------CLAVVGNSRRVK----------------------DAHKLFDELSDRDVVS 234
                     C+ V   +R +                       DA ++FDEL  RD + 
Sbjct: 154 ACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTIL 213

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
           WN M+ GY+ +G     +  F  M      V+  T   +LS CA  G    G  VH   +
Sbjct: 214 WNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVI 273

Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
            + F  +    NTL+ MYSKCG+L  A ++F  M +   V+W  +IAGY + G  D A  
Sbjct: 274 GSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 333

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LF  M+  G++PD     S L +    G L   K+VH YI  + +   +Y+ +AL+D+Y 
Sbjct: 334 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYF 393

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMAC 463
           K G +  A  +F Q  + D+     MI           A++ F  ++Q    P+ +TMA 
Sbjct: 394 KGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMAS 453

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           +LPACA+LAAL+ G+E+H  IL+  +    NV +AI DMY KCG L LA   F  +   D
Sbjct: 454 VLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETD 513

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
            I W  MI+ +  +G    A+  F  M  +G + D
Sbjct: 514 SICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFD 548



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 208/435 (47%), Gaps = 23/435 (5%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           R+ D   LF  L   + + WN MI G    G  +  L  + +ML    + D  T   V+ 
Sbjct: 94  RISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIK 153

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            C     +     VH  A    F  ++   + L+ +Y+  G +  A RVF+++ +R  + 
Sbjct: 154 ACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTIL 213

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W  M+ GY + G F+ A+  F GM       +    T IL  CA  G   +G  VH  + 
Sbjct: 214 WNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVI 273

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
            +  +    V+N L+ MY+KCG++ DA  +FN MP  D V+WN +I           A  
Sbjct: 274 GSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 333

Query: 446 LFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           LF AM+    +PD VT A  LP+     +L   +E+H YI+RH +  D  + +A++D+Y 
Sbjct: 334 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYF 393

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           K G + +AR +F      D+   T MI+GY +HG   DAI TF  + Q G+ P+ ++  S
Sbjct: 394 KGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMAS 453

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNI-EPKLEHY----ACMVDLLSRTGNLSEAYRFIE 619
           VL AC+    +  G          C+I + +LE+     + + D+ ++ G L  AY F  
Sbjct: 454 VLPACAALAALKLGKEL------HCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFR 507

Query: 620 MMPVAPDATIWGSLL 634
            M    D+  W S++
Sbjct: 508 RMS-ETDSICWNSMI 521



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 152/313 (48%), Gaps = 11/313 (3%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
           ++   C++   +   R VH   +    S   + ++ +L +Y  CG +     +F  +   
Sbjct: 49  SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELC 108

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           + + W  MI G    G FD A+  +  M+   + PD Y    ++ AC     + +   VH
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 168

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---------- 441
           +  +       L+V +AL+ +YA  G + DA  VF+++P +D + WN M+          
Sbjct: 169 NTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFN 228

Query: 442 GALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            A+  F  M  ++   + VT  CIL  CA+      G ++HG ++  G   D  VAN +V
Sbjct: 229 NAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLV 288

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
            MY KCG L  AR LF+ +P  D ++W  +IAGY  +GF  +A   FN M  AG++PD V
Sbjct: 289 AMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSV 348

Query: 561 SFISVLYACSHSG 573
           +F S L +   SG
Sbjct: 349 TFASFLPSILESG 361



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 126/278 (45%), Gaps = 15/278 (5%)

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           + S+  AC+   +++  + VH  I    M     +S+ ++ +Y  CG ++D  ++F  + 
Sbjct: 47  LESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLE 106

Query: 431 VKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGRE 479
           + + + WN MI           AL  +  ML  N  PD  T   ++ AC  L  +     
Sbjct: 107 LCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMV 166

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +H      G   D  V +A++ +Y   G +  AR +FD +P +D I W +M+ GY   G 
Sbjct: 167 VHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGD 226

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM-MRYECNIEPKLEHY 598
             +A+ TF  MR +    + V++  +L  C+  G    G +   + +      +P++ + 
Sbjct: 227 FNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVAN- 285

Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
             +V + S+ GNL +A +    MP   D   W  L+ G
Sbjct: 286 -TLVAMYSKCGNLFDARKLFNTMP-QTDTVTWNGLIAG 321


>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1347

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 244/696 (35%), Positives = 390/696 (56%), Gaps = 49/696 (7%)

Query: 89   SEKSKIDTKTYCSILQLCADLKS-LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
            SEK++I    + S+L+ CA  +  L  G+KVH  I +SG V DD V+ + L+ M+   G+
Sbjct: 651  SEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSG-VDDDAVIETSLLCMYGQTGN 709

Query: 148  LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
            L +  +VF+ +    +  W+ L+    +     ++L +FK M   G+  D+ T   V++ 
Sbjct: 710  LSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEG 769

Query: 208  LAVVGNSRRVKDAH--------------------------------KLFDELSDRDVVSW 235
             A +G  R  +  H                                K+F++++ ++ VSW
Sbjct: 770  CAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSW 829

Query: 236  NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
              MIS Y     +EK L  F EML  G   +L T+ ++LS C   G +  G++VH FA++
Sbjct: 830  TAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIR 889

Query: 296  ACFSKEI-SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
                    S +  L+++Y++CG L     +   +G+R++V W S I+ YA  G+   A+ 
Sbjct: 890  RELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALC 949

Query: 355  LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
            LFR MV   I+PD + + SI+ AC   GL+ +GK +H ++   D+ S  +V N+++DMY+
Sbjct: 950  LFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDV-SDEFVQNSVIDMYS 1008

Query: 415  KCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMAC 463
            K G +  A +VF+Q+  + IV+WN+M+           A++LF  M  +  E + VT   
Sbjct: 1009 KSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLA 1068

Query: 464  ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
            ++ AC+S+ +LE+GR +H  ++  GI  D     A++DMY KCG L  A ++F  +  + 
Sbjct: 1069 VIQACSSIGSLEKGRWVHHKLIVCGIK-DLFTDTALIDMYAKCGDLNTAETVFRAMSNRS 1127

Query: 524  LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
            ++SW+ MI  YGMHG    AI+TFN M ++G +P+EV F++VL AC HSG V+EG  +FN
Sbjct: 1128 IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN 1187

Query: 584  MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
            +M+    + P  EH+AC +DLLSR+G+L EAYR I+ MP   DA++WGSL+ GCRIH ++
Sbjct: 1188 LMKL-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKM 1246

Query: 644  KLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
             + + +   + ++  D+TGYY LL+N+YAE  +WEE +++R  +    LKK PG S IEI
Sbjct: 1247 DIIKAIKNDISDIVTDDTGYYTLLSNIYAEEGEWEEFRRMRSAMKSLNLKKVPGYSAIEI 1306

Query: 704  KGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
              KV  F AG  +    ++I   L  L+     E Y
Sbjct: 1307 DKKVFRFGAGEETCFQTEEIYMFLGNLQNLTLEEDY 1342



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 178/350 (50%), Gaps = 17/350 (4%)

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNT-LLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           +C +L     +HA  L     +      T L++ Y+  G  D +  VFE         + 
Sbjct: 568 SCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYG 627

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA-CDGLLEIGKDVHDYIKE 396
            +I       + D AI L+  +V E  +   +   S+L ACA     L +G+ VH  I +
Sbjct: 628 VLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIK 687

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
           + +     +  +L+ MY + G+++DAE VF+ MPV+D+V+W+T++           AL +
Sbjct: 688 SGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRM 747

Query: 447 FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M+ +  EPD VTM  ++  CA L  L   R +HG I R     D  + N+++ MY K
Sbjct: 748 FKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSK 807

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           CG L+ +  +F+ I  K+ +SWT MI+ Y    F   A+ +F++M ++GIEP+ V+  S+
Sbjct: 808 CGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSI 867

Query: 566 LYACSHSGLVDEGWRFFNM-MRYECNIEPKLEHYA-CMVDLLSRTGNLSE 613
           L +C  +GL+ EG       +R E  ++P  E  +  +V+L +  G L +
Sbjct: 868 LSSCGLNGLIREGKSVHGFAIRRE--LDPNYESLSPALVELYAECGRLGD 915


>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
          Length = 717

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/538 (39%), Positives = 323/538 (60%), Gaps = 15/538 (2%)

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVS---WTSMIAGYAREGVFDGAIRLFRGMVREGI 364
           L+ ++S C  LD A ++F+ + + S+++   W +M  GY+R G    A+ ++  M+   I
Sbjct: 180 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 239

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
           EP  ++I+  L AC     L +G+ +H  I +   +    V N L+ +Y + G   DA  
Sbjct: 240 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 299

Query: 425 VFNQMPVKDIVSWNTMIGAL----------DLFVAMLQNFEP-DGVTMACILPACASLAA 473
           VF+ M  +++V+WN++I  L          +LF  M +        T+  ILPAC+ +AA
Sbjct: 300 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA 359

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           L  G+EIH  IL+     D  + N+++DMY KCG +  +R +FD++  KDL SW IM+  
Sbjct: 360 LLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 419

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           Y ++G   + I  F  M ++G+ PD ++F+++L  CS +GL + G   F  M+ E  + P
Sbjct: 420 YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 479

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
            LEHYAC+VD+L R G + EA + IE MP  P A+IWGSLL  CR+H  V + E  A+ +
Sbjct: 480 ALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKEL 539

Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
           F LEP N G YV+++N+YA+A+ W+ V K+RE + +RG+KK  GCSW+++K K+ IFVAG
Sbjct: 540 FVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 599

Query: 714 GS-SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G     ++ + + +   L+  +++ GY P T   L + DE  K   +CGHSE+LA  + +
Sbjct: 600 GGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSL 659

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           ++   G  IR+TKNLRVC DCH   K +S+  RR IVLRD+ RFHHF DG CSC+ +W
Sbjct: 660 IHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 717



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 180/387 (46%), Gaps = 37/387 (9%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + Y  +L  C   KSL  G K+ S+I  +  +  +  L SKL+ +F  C  L   R++F+
Sbjct: 139 EAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFD 198

Query: 157 KIDNGKVF---IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------ 207
            + +  +    +W  +   YS+ G+ +++L ++  M    I   +++ S  LK       
Sbjct: 199 DVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKD 258

Query: 208 --------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
                                     L +   S    DA K+FD +S+R+VV+WN +IS 
Sbjct: 259 LRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISV 318

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
                   +   +F++M         AT+ T+L  C+   AL+ G+ +HA  LK+    +
Sbjct: 319 LSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 378

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +   N+L+DMY KCG+++ + RVF+ M  + + SW  M+  YA  G  +  I LF  M+ 
Sbjct: 379 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 438

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMA 420
            G+ PD     ++L  C+  GL E G  + + +K E  +  +L     L+D+  + G + 
Sbjct: 439 SGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIK 498

Query: 421 DAESVFNQMPVKDIVS-WNTMIGALDL 446
           +A  V   MP K   S W +++ +  L
Sbjct: 499 EAVKVIETMPFKPSASIWGSLLNSCRL 525



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 136/313 (43%), Gaps = 38/313 (12%)

Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
           L+ C DLK L  G+ +H+ I +    +D  V+ + L+ +++  G   + R+VF+ +    
Sbjct: 250 LKACVDLKDLRVGRGIHAQIVKRKEKVDQ-VVYNVLLKLYMESGLFDDARKVFDGMSERN 308

Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV----------- 211
           V  WN L+   SK     E   LF+KMQ   I     T + +L   + V           
Sbjct: 309 VVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHA 368

Query: 212 ---------------------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
                                G    V+ + ++FD +  +D+ SWN M++ Y  NG  E+
Sbjct: 369 QILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEE 428

Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF--SKEISFNNTL 308
            + +F+ M+  G   D  T V +LSGC++ G   +G ++    +K  F  S  +     L
Sbjct: 429 VINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFE-RMKTEFRVSPALEHYACL 487

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAGYAREG-VFDGAIRLFRGMVREGIEP 366
           +D+  + G +  A++V E M  +   S W S++      G V  G I      V E   P
Sbjct: 488 VDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNP 547

Query: 367 DVYAITSILHACA 379
             Y + S ++A A
Sbjct: 548 GNYVMVSNIYADA 560



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 5/134 (3%)

Query: 72  RFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDD 131
           R  E+ NL + M+     E       T  +IL  C+ + +L  GK++H+ I +S    D 
Sbjct: 324 RVHEMFNLFRKMQ----EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDV 379

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
            +L S L+ M+  CG+++  RRVF+ +    +  WN++++ Y+  GN +E + LF+ M  
Sbjct: 380 PLLNS-LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 438

Query: 192 LGIAADSYTFSCVL 205
            G+A D  TF  +L
Sbjct: 439 SGVAPDGITFVALL 452


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 252/780 (32%), Positives = 400/780 (51%), Gaps = 51/780 (6%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           ++  + +L  +  SLE G+K+H  + ESG   D   L + L+ M+      ++   + ++
Sbjct: 14  SWRDLARLVDESTSLEQGRKIHRRVIESGYG-DHLFLSNHLLHMYARLESSRDAELLLDR 72

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---------- 207
           +       WN ++   ++ G+F  SL  F++M   G   D+  F  ++K           
Sbjct: 73  MPRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQEGEIV 132

Query: 208 -------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
                              + + G   R+  A   FD + +R VVSWN +I+ Y      
Sbjct: 133 QEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEK 192

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF--GRAVHAFALKACFSKEISFNN 306
           E+ L VF+EML  G   +  T++ + S  A   A +   G  +H+ ++ +      +  N
Sbjct: 193 EQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVAN 252

Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
           ++++++ + G++  A  +FEKM  R V SW +MI+ +A+ G   GA+ L+  M    I P
Sbjct: 253 SIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMT---IRP 309

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D     ++L AC C   LE G+ +H  ++ +   S L V+ AL+ MY +CG +  A  VF
Sbjct: 310 DGVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVF 369

Query: 427 NQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALE 475
             +    +++ N +I          G+L  F  MLQ    P   T+  +L ACA+  A  
Sbjct: 370 AAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAA 429

Query: 476 RG-REIHGYILRHGISADRN---VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
              R++H ++       D +   V NA+V+MY KCG L  AR +FD  P  ++ +W  ++
Sbjct: 430 SAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIM 489

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           AGY  HG+   A+    +M+ AGI PD +SF + L A SH+  V++G R F  +  +  +
Sbjct: 490 AGYAQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGL 549

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P +EHY  +VDLL R G L EA  F+  M +A DA  W +LL  CRIH +   A + AE
Sbjct: 550 IPSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAE 609

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            +  ++P +   Y +L+NVY+ A +W+E +++R ++S  G +K PG SWIE+K +V+ F 
Sbjct: 610 AIVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFA 669

Query: 712 AGGSSHPHAKKIESLLKRLRLEMK-REGYFPKTRYALINADEMEKEVALCGHSEKLAMAF 770
               SHP   +I   L  LR+ +K  E Y P     L + ++  +E  L  HSEKLA+ F
Sbjct: 670 VKDRSHPRTGEIYERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGF 729

Query: 771 GILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           G++    G  I + KNLR+C DCH + K  SK  +REIV+RD  RFHHF  G CSC   W
Sbjct: 730 GLIGTKEGSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/310 (22%), Positives = 122/310 (39%), Gaps = 42/310 (13%)

Query: 49  NPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCAD 108
           N I   + +  VC   ++N  I  F + G+   A++ LY     + D  T+ ++L+ C  
Sbjct: 268 NDIFEKMDRRDVC---SWNTMISAFAQNGHSSGALD-LYGRMTIRPDGVTFVNVLEACDC 323

Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNL 168
              LE G+ +H  +   G    D ++ + LV M+  CG L     VF  I +  V   N 
Sbjct: 324 PDDLERGESIHRDVRAHG-YDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNA 382

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL-------------------- 208
           ++  +++ G    SL  F++M  LGI    +T   VL                       
Sbjct: 383 IIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAEC 442

Query: 209 -------------AVVGNSRRVKD---AHKLFDELSDRDVVSWNCMISGYIANGVAEKGL 252
                        A+V    +  D   A  +FD     +V +WN +++GY  +G A   +
Sbjct: 443 PGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAV 502

Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDM 311
            +  EM   G + D  +    LS  ++   +  G R  +A +        +     ++D+
Sbjct: 503 RLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDL 562

Query: 312 YSKCGDLDGA 321
             + G L+ A
Sbjct: 563 LGRAGWLEEA 572


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 246/707 (34%), Positives = 381/707 (53%), Gaps = 50/707 (7%)

Query: 81   KAMEVLYSSEKSKIDT--KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
            +A+E   +  K+ I +   T  S+L   A L +L+ G  VH+   + G+   +  +GS L
Sbjct: 310  EAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLH-SNVYVGSSL 368

Query: 139  VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS 198
            V M+  CG ++  ++VF+ ++   V +WN ++  Y + G   E + LF  M+S G   D 
Sbjct: 369  VSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDD 428

Query: 199  YTFSCVLKCLA------------------------VVGN--------SRRVKDAHKLFDE 226
            +T+S +L   A                         VGN        S  ++DA + F+ 
Sbjct: 429  FTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFEL 488

Query: 227  LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
            + +RD VSWN +I GY+      +   +F+ M  LG   D  ++ ++LS CA+   L  G
Sbjct: 489  IRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQG 548

Query: 287  RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
            + VH  ++K     ++   ++L+DMY+KCG +D A ++   M ERSVVS  ++IAGYA+ 
Sbjct: 549  KQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQI 608

Query: 347  GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ-SSLYV 405
             + + A+ LFR M+ EGI        S+L AC     L +G+ +H  I +  +Q    ++
Sbjct: 609  NL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFL 667

Query: 406  SNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTMIGAL---DLFVAMLQ--------N 453
              +L+ MY       DA  +F++    K  V W  MI  L   D  V  LQ        N
Sbjct: 668  GVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCN 727

Query: 454  FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLAR 513
              PD  T    L ACA +++++ G E H  I   G  +D   ++A+VDMY KCG +  + 
Sbjct: 728  VLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSM 787

Query: 514  SLF-DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
             +F +M   KD+ISW  MI G+  +G+  DA+  F++M+Q+ + PD+V+F+ VL ACSHS
Sbjct: 788  QVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHS 847

Query: 573  GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
            G V EG   F+MM     ++P+ +H ACMVDLL R G+L EA  FI  +   PDA +W +
Sbjct: 848  GRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWAT 907

Query: 633  LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
            +L  CRIH +    ++ AE + ELEP N+  YVLL+N+YA +  W+EV  LR ++  +G+
Sbjct: 908  MLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGV 967

Query: 693  KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
            KK PGCSWI +  + N+FVAG  SH  A +I+++LK L   M+   Y
Sbjct: 968  KKLPGCSWIVVGQETNMFVAGDKSHHSASEIDAILKDLTPLMRENDY 1014



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 163/499 (32%), Positives = 265/499 (53%), Gaps = 16/499 (3%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+  +L  CA L+ ++ G++VH  + + G        G+ L+ M+  C  L + R +F+ 
Sbjct: 162 TFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGA-LIGMYAKCNFLTDARSIFDG 220

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV 217
                   W  ++  Y K G  +E++ +F++M+ +G   D   F  V+     +G   R+
Sbjct: 221 AVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLG---RL 277

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
            +A  LF  + +R+VV+WN MISG+   G   + +E F+ M   G     +T+ +VLS  
Sbjct: 278 DNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAI 337

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           A+  AL FG  VHA ALK      +   ++L+ MY+KCG ++ A +VF+ + E++VV W 
Sbjct: 338 ASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWN 397

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           +M+ GY + G  +  + LF  M   G  PD +  +SIL ACAC   L++G  +H  I +N
Sbjct: 398 AMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKN 457

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLF 447
              S+L+V NAL+DMYAK G++ DA   F  +  +D VSWN +I           A  LF
Sbjct: 458 KFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLF 517

Query: 448 VAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M L    PD V++A IL ACAS+  LE+G+++H   ++ G        ++++DMY KC
Sbjct: 518 RRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKC 577

Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           G +  A  +   +P + ++S   +IAGY        A+  F DM   GI   E++F S+L
Sbjct: 578 GAIDSAHKILACMPERSVVSMNALIAGYAQINLE-QAVNLFRDMLVEGINSTEITFASLL 636

Query: 567 YACSHSGLVDEGWRFFNMM 585
            AC     ++ G +  +++
Sbjct: 637 DACHEQQKLNLGRQIHSLI 655



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 157/534 (29%), Positives = 255/534 (47%), Gaps = 79/534 (14%)

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
           GVLG+ +V ++  C D+    R F ++++  +  WN ++  +SK G     +  F  + +
Sbjct: 94  GVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWN 153

Query: 192 LGIAADSYTFSCVLKC---LAVVGNSRRV-----------------------------KD 219
            G+  + +TF+ VL     L +V   R+V                              D
Sbjct: 154 SGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTD 213

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +FD   + D VSW  MI GYI  G+ E+ ++VF+EM  +G   D    VTV++    
Sbjct: 214 ARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINA--- 270

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
                                           Y   G LD A  +F +M  R+VV+W  M
Sbjct: 271 --------------------------------YVDLGRLDNASDLFSRMPNRNVVAWNLM 298

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I+G+A+ G    AI  F+ M + GI+     + S+L A A    L+ G  VH    +  +
Sbjct: 299 ISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGL 358

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVA 449
            S++YV ++L+ MYAKCG M  A+ VF+ +  +++V WN M+G           ++LF  
Sbjct: 359 HSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFN 418

Query: 450 MLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M    F PD  T + IL ACA L  L+ G ++H  I+++  +++  V NA+VDMY K G 
Sbjct: 419 MKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGA 478

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  AR  F++I  +D +SW ++I GY       +A   F  M   GI PDEVS  S+L A
Sbjct: 479 LEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSA 538

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           C+    +++G +  + +  +   E KL   + ++D+ ++ G +  A++ +  MP
Sbjct: 539 CASVRGLEQG-KQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMP 591



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 209/435 (48%), Gaps = 56/435 (12%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V  A + F +L D+D+++WN ++S +   G     ++ F  + N G   +  T   VLS 
Sbjct: 110 VDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSS 169

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA    +  GR VH   +K  F         L+ MY+KC  L  A  +F+   E   VSW
Sbjct: 170 CARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSW 229

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
           TSMI GY + G+ + A+++F+ M + G EPD  A  ++++A                   
Sbjct: 230 TSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINA------------------- 270

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
                           Y   G + +A  +F++MP +++V+WN MI           A++ 
Sbjct: 271 ----------------YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEF 314

Query: 447 FVAMLQNFEPDGV-----TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
           F    QN    G+     T+  +L A ASLAAL+ G  +H   L+ G+ ++  V +++V 
Sbjct: 315 F----QNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVS 370

Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
           MY KCG +  A+ +FD +  ++++ W  M+ GY  +G+  + +  F +M+  G  PD+ +
Sbjct: 371 MYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFT 430

Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
           + S+L AC+    +D G +  +++  +      L     +VD+ +++G L +A +  E++
Sbjct: 431 YSSILSACACLKYLDLGHQLHSVI-IKNKFASNLFVGNALVDMYAKSGALEDARQQFELI 489

Query: 622 PVAPDATIWGSLLCG 636
               D   W  ++ G
Sbjct: 490 R-NRDNVSWNVIIVG 503



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 189/387 (48%), Gaps = 34/387 (8%)

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           + +HA +LK  F  +    N ++D+Y+KC D+D A R F+++ ++ +++W S+++ ++++
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G     ++ F  +   G+ P+ +    +L +CA   +++ G+ VH  + +   +S  Y  
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILP 466
            AL+ MYAKC  + DA S+F+     D VSW +MIG                  +   LP
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGY----------------IKVGLP 242

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
                   E   ++   + + G   D+     +++ YV  G L  A  LF  +P +++++
Sbjct: 243 --------EEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVA 294

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           W +MI+G+   G+G +AI  F +MR+AGI+    +  SVL A +    +D G    +   
Sbjct: 295 WNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGL-LVHAEA 353

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
            +  +   +   + +V + ++ G +  A +  + +    +  +W ++L G   + +   A
Sbjct: 354 LKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLN-EQNVVLWNAMLGG---YVQNGYA 409

Query: 647 EKVAEHVFELE-----PDNTGYYVLLA 668
            +V E  F ++     PD+  Y  +L+
Sbjct: 410 NEVMELFFNMKSCGFYPDDFTYSSILS 436



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 21/223 (9%)

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           IH   L+ G  +   + N IVD+Y KC  +  A   F  +  KD+++W  +++ +   GF
Sbjct: 81  IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI-----EPK 594
               +  F  +  +G+ P+E +F  VL +C+   +V  G       +  CN+     E  
Sbjct: 141 PHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCG------RQVHCNVVKMGFESI 194

Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
                 ++ + ++   L++A R I    V  D   W S++ G   + +V L E+  +   
Sbjct: 195 SYCEGALIGMYAKCNFLTDA-RSIFDGAVELDKVSWTSMIGG---YIKVGLPEEAVKVFQ 250

Query: 655 EL-----EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
           E+     EPD    +V + N Y +  + +    L  ++  R +
Sbjct: 251 EMEKVGQEPDQVA-FVTVINAYVDLGRLDNASDLFSRMPNRNV 292


>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/613 (36%), Positives = 343/613 (55%), Gaps = 57/613 (9%)

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS--KCGDLDGAIRVFEKMGER 331
           LS    C A      +HAF+LK         ++ LL +YS  K  DL  A  +F+++  R
Sbjct: 20  LSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRR 79

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           S++ W ++I  Y         I LF  +V E + PD + +  ++  CA  G+++ GK +H
Sbjct: 80  SLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIH 138

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN------------------------ 427
               +    S ++V  +L++MY+KCG +  A  VF+                        
Sbjct: 139 GLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAM 198

Query: 428 ------------------QMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDG 458
                             QMP+ D+V+WN MI           A+ +F  ML+    P  
Sbjct: 199 INGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSH 258

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
            T+  +L A + LA L +GR IH Y+ ++G   D  +  ++++MY KCG +  A ++F  
Sbjct: 259 ATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRA 318

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           I  K +  WT +I G G+HG    A+A F +M + G++P+ + FI VL AC+H+GLVD+G
Sbjct: 319 IQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDG 378

Query: 579 WRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCR 638
            ++F+MM  E  IEP LEHY C+VD+L R G+L EA   IE MP++P+  IW SLL G R
Sbjct: 379 RQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSR 438

Query: 639 IHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGC 698
            H ++ + E  A+ V E+ P+  G Y+LL+N+YA +  WE+V  +RE + +RG +K+PGC
Sbjct: 439 NHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGC 498

Query: 699 SWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD-EMEKEV 757
           S +E KG ++ F+ G  SHP  K+I + +  ++ ++K  G+ P T   L+  + E EKE 
Sbjct: 499 SSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEA 558

Query: 758 ALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFH 817
            L  HSE+LA+AFG++N+  G  IR+ KNLRVC DCH + K +SK   REI++RD+ RFH
Sbjct: 559 ELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFH 618

Query: 818 HFKDGRCSCRGFW 830
           HFK+G CSC  +W
Sbjct: 619 HFKNGSCSCMDYW 631



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 176/362 (48%), Gaps = 52/362 (14%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T   +++ CA L  +++GK++H +  + G   D  V GS LV M+  CG++   R+V
Sbjct: 114 DNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGS-LVNMYSKCGEIDCARKV 172

Query: 155 F-----------NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSC 203
           F           N + +G +  WN +++ Y K+G+F  +L LF +M              
Sbjct: 173 FDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIW----------- 221

Query: 204 VLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
                                      D+V+WN MI+GY  NG     +++F  ML LG 
Sbjct: 222 ---------------------------DLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS 254

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
               AT+V+VLS  +    L  GR +H++  K  F  +     +L++MY+KCG ++ A+ 
Sbjct: 255 RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALT 314

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           VF  + ++ V  WT++I G    G+ + A+ LF  M + G++P+      +L+AC   GL
Sbjct: 315 VFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGL 374

Query: 384 LEIGKDVHD-YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
           ++ G+   D  + E  ++ +L     L+D+  + G + +A++    MP+  + V W +++
Sbjct: 375 VDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLL 434

Query: 442 GA 443
           G 
Sbjct: 435 GG 436



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 188/409 (45%), Gaps = 61/409 (14%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A  +FD +  R ++ WN +I  Y+ N  +  G+ +F E+++  +  D  T+  V+ GCA 
Sbjct: 69  ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCAR 127

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV----- 334
            G +  G+ +H  ALK  F  ++    +L++MYSKCG++D A +VF+ M ++ VV     
Sbjct: 128 LGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSL 187

Query: 335 ------SWTSMIAGYAREGVFDGAIRLFRGM----------------------------- 359
                 SW +MI GY + G FD A+ LF  M                             
Sbjct: 188 IDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFF 247

Query: 360 --VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
             ++ G  P    + S+L A +   +L  G+ +H Y+++N  +    +  +L++MYAKCG
Sbjct: 248 MMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCG 307

Query: 418 SMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILP 466
            +  A +VF  +  K +  W  +I           AL LF+ M +   +P+ +    +L 
Sbjct: 308 CIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLN 367

Query: 467 ACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDL 524
           AC     ++ GR+    ++  + I         +VD+  + G L  A++  + +P + + 
Sbjct: 368 ACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNK 427

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS---FISVLYACS 570
           + W  ++ G   HG   D I  +   R   + P+ +     +S +YA S
Sbjct: 428 VIWMSLLGGSRNHG-KID-IGEYAAQRVIEVAPETIGCYILLSNMYAAS 474



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 9/188 (4%)

Query: 451 LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY--VKCGV 508
           LQ + P  + ++ +   C++   +E   ++H + L+  I     V++ ++ +Y   K   
Sbjct: 10  LQQYLPHNLHLS-LFQTCSAPQEVE---QLHAFSLKTAIFNHPFVSSRLLALYSDPKIND 65

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
           L  ARS+FD I  + LI W  +I  Y  + F  D I  F+++    + PD  +   V+  
Sbjct: 66  LGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKG 124

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           C+  G+V EG +  + +  +      +     +V++ S+ G +  A +  + M +  D  
Sbjct: 125 CARLGVVQEG-KQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVV 182

Query: 629 IWGSLLCG 636
           +W SL+ G
Sbjct: 183 LWNSLIDG 190



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 7/242 (2%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           S+    T  S+L   + L  L  G+ +HS + ++G  +D G+LG+ L+ M+  CG ++  
Sbjct: 254 SRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELD-GILGTSLIEMYAKCGCIESA 312

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
             VF  I   KV  W  ++      G    +L LF +M   G+  ++  F  VL      
Sbjct: 313 LTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHA 372

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG-LEVFKEML-NLGFNVDLAT 269
           G    V D  + FD + +   +       G + + +   G LE  K  + N+  + +   
Sbjct: 373 G---LVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVI 429

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
            +++L G  N G +  G       ++    + I     L +MY+  G  +    V E M 
Sbjct: 430 WMSLLGGSRNHGKIDIGEYAAQRVIEVA-PETIGCYILLSNMYAASGMWEKVSHVREMMY 488

Query: 330 ER 331
           +R
Sbjct: 489 KR 490


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/593 (37%), Positives = 332/593 (55%), Gaps = 49/593 (8%)

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           + VHA  L+    ++    N +L      G+ + + R+F +  E ++  + +MI G    
Sbjct: 27  KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
             F  +I ++  M +EG+ PD +    +L ACA     ++G  +H  + +   +S  +V+
Sbjct: 87  DSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVN 146

Query: 407 NALMDMYAKCGSMADAESVFNQMPVK---------------------------------- 432
            +L+ +Y KCG + +A  VF+ +P K                                  
Sbjct: 147 TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDG 206

Query: 433 ----DIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERG 477
               DIVSW++MI           ALDLF  ML + F PD   M  +L ACA L ALE G
Sbjct: 207 MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELG 266

Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
                 + R+    +  +  A++DMY KCG +  A  +F  +  KD++ W   I+G  M 
Sbjct: 267 NWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMS 326

Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
           G    A   F  M ++GIEPD  +F+ +L AC+H+GLVDEG ++FN M     + P++EH
Sbjct: 327 GHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEH 386

Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
           Y CMVDLL R G L EA++ ++ MP+  +A +WG+LL GCR+H + +L E V + +  LE
Sbjct: 387 YGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALE 446

Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
           P N+G YVLL+N+Y+ + KWE+  K+R  +S RG+KK PG SWIE+ G V+ F+ G +SH
Sbjct: 447 PSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSH 506

Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
           P ++KI + L  L  ++K  GY P T Y L + +E EKE  +  HSEKLA+AFG+++   
Sbjct: 507 PLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAP 566

Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
              IRV KNLRVCGDCHE  K +S+   REI++RD+NRFH F DG CSC+ +W
Sbjct: 567 NDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 179/397 (45%), Gaps = 54/397 (13%)

Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
           LG+  DSY  + VL+     GN+     +H++F +  + ++  +N MI G + N   ++ 
Sbjct: 36  LGLDEDSYLLNKVLRFSFNFGNTNY---SHRIFHQTKEPNIFLFNTMIHGLVLNDSFQES 92

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           +E++  M   G + D  T   +L  CA       G  +H   +KA    +   N +L+ +
Sbjct: 93  IEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSL 152

Query: 312 YSKCGDLDGAIRVFEK--------------------------------------MGERSV 333
           Y KCG +D A +VF+                                       M E+ +
Sbjct: 153 YGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDI 212

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSW+SMI GYA  G+   A+ LF  M+ EG  PD YA+  +L ACA  G LE+G    + 
Sbjct: 213 VSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNL 272

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GA 443
           +  N+   +  +  AL+DMYAKCG M  A  VF  M  KDIV WN  I           A
Sbjct: 273 MDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAA 332

Query: 444 LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVD 501
             LF  M ++  EPDG T   +L AC     ++ GR+    + R   ++ +      +VD
Sbjct: 333 FGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVD 392

Query: 502 MYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
           +  + G L  A  L   +P + + I W  ++ G  +H
Sbjct: 393 LLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLH 429



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 178/373 (47%), Gaps = 36/373 (9%)

Query: 78  NLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLG 135
           + ++++E+ +S  K  +  D+ T+  +L+ CA L   + G K+H ++ ++G    D  + 
Sbjct: 88  SFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCE-SDAFVN 146

Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
           + LV ++  CG +    +VF+ I    V  W  ++  Y   G  +E++ +F++       
Sbjct: 147 TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRR------- 199

Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                                   A  +FD + ++D+VSW+ MI GY +NG+ ++ L++F
Sbjct: 200 ------------------------ACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLF 235

Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
            +MLN GF  D   MV VL  CA  GAL  G        +  F         L+DMY+KC
Sbjct: 236 FKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKC 295

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G +D A  VF  M ++ +V W + I+G A  G    A  LF  M + GIEPD      +L
Sbjct: 296 GRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLL 355

Query: 376 HACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-D 433
            AC   GL++ G+   + ++    +   +     ++D+  + G + +A  +   MP++ +
Sbjct: 356 CACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEAN 415

Query: 434 IVSWNTMIGALDL 446
            + W  ++G   L
Sbjct: 416 AIVWGALLGGCRL 428



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/166 (19%), Positives = 74/166 (44%), Gaps = 6/166 (3%)

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           +L+  + +H  +LR G+  D  + N ++      G    +  +F      ++  +  MI 
Sbjct: 22  SLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIH 81

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE--GWRFFNMMRYECN 590
           G  ++    ++I  ++ MR+ G+ PD  +F  +L AC+   L+D   G +   ++  +  
Sbjct: 82  GLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACAR--LLDSKLGIKLHGLV-VKAG 138

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            E        +V L  + G +  A++  + +P   +   W +++ G
Sbjct: 139 CESDAFVNTSLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIISG 183


>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
 gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/530 (38%), Positives = 316/530 (59%), Gaps = 12/530 (2%)

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
           S  G +D A  +F ++ +     + +MI GY      + A+ L+  M+  G+E D +   
Sbjct: 30  SDWGSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYP 89

Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           ++  ACA    +E G  +H YI +  ++  L+V N+L++MY KCG +  + SVF  M  +
Sbjct: 90  ALFKACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRR 149

Query: 433 DIVSWNTMIGA---LDLFVAMLQNF---------EPDGVTMACILPACASLAALERGREI 480
           D+ SW+ +I A   L ++   L  F          P+   +  +L AC  L AL+ GR  
Sbjct: 150 DVASWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCT 209

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           H  +LR+    +  V  +++DMYVKCG +    SLF  +  K+ +S+++MI G  MHG G
Sbjct: 210 HVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRG 269

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
            +A+  F+DM + G++PD+V ++ VL AC+H+GLVDEG + FN M+ E  IEP ++HY C
Sbjct: 270 MEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGC 329

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDN 660
           +V L+ R G L++A   I  MP+ P+  +W  LL  C+ HH +++ E  A+ + EL   N
Sbjct: 330 IVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHNLEIGEIAAKSLGELNSSN 389

Query: 661 TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHA 720
            G YV+L+N+YA A++WE+V K+R +++R+G  + PG S ++++ K+  FV+   SHP  
Sbjct: 390 PGDYVVLSNMYARAKRWEDVAKIRTEMARKGFTQTPGFSLVQVERKIYKFVSQDMSHPQC 449

Query: 721 KKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT 780
           K +  ++ ++  ++K EGY P T   L + DE EK   L  HS+KLAMAF +++   G  
Sbjct: 450 KGMYEMIHQMEWQLKFEGYSPDTSQVLFDVDEEEKRQRLKAHSQKLAMAFALIHTSQGAP 509

Query: 781 IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           IR+ +NLR+C DCH   K +S   +REI +RD NRFHHFKDG CSCR +W
Sbjct: 510 IRIARNLRMCNDCHTYTKLISVIYQREITVRDRNRFHHFKDGTCSCRDYW 559



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 14/329 (4%)

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +F ++       +N MI GY+     E  L ++ EML  G   D  T   +   CA+  +
Sbjct: 41  IFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRS 100

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           +  G  +H +  K     ++   N+L++MY KCG ++ +  VFE M  R V SW+++IA 
Sbjct: 101 IEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAA 160

Query: 343 YAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQS 401
           +A  G++   + +F  M REG   P+   + S+L AC   G L++G+  H  +  N  + 
Sbjct: 161 HASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREM 220

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
           ++ V  +L+DMY KCG +    S+F +M  K+ +S++ MI           AL +F  ML
Sbjct: 221 NVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDML 280

Query: 452 QN-FEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVL 509
           +   +PD V    +L AC     ++ G +    + L HGI         IV +  + G+L
Sbjct: 281 EEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGML 340

Query: 510 VLARSLFDMIPAK-DLISWTIMIAGYGMH 537
             A      +P K + + W  +++    H
Sbjct: 341 NKALEHIRSMPIKPNEVVWRGLLSACKFH 369



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 176/372 (47%), Gaps = 47/372 (12%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC-----GDLKEGRRVFNKIDNGKVFIW 166
           +E+ K+VH+ +    +  ++    S LV    TC     G +     +F +ID    F +
Sbjct: 1   MEEFKQVHAQV----LKWENSFCASNLV---ATCALSDWGSMDYACSIFRQIDQPGTFEF 53

Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----------------- 209
           N ++  Y    N + +L+L+ +M   G+ +D++T+  + K  A                 
Sbjct: 54  NTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFK 113

Query: 210 ---------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
                          + G   +++ +  +F+ +  RDV SW+ +I+ + + G+  + L V
Sbjct: 114 RGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSV 173

Query: 255 FKEMLNLGF-NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
           F EM   G    + + +V+VLS C + GAL  GR  H   L+      +    +L+DMY 
Sbjct: 174 FGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYV 233

Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITS 373
           KCG ++  + +F++M +++ +S++ MI G A  G    A+++F  M+ EG++PD      
Sbjct: 234 KCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLG 293

Query: 374 ILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           +L AC   GL++ G    + +K E+ ++ ++     ++ +  + G +  A      MP+K
Sbjct: 294 VLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIK 353

Query: 433 -DIVSWNTMIGA 443
            + V W  ++ A
Sbjct: 354 PNEVVWRGLLSA 365



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 169/385 (43%), Gaps = 30/385 (7%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
           T  +N  I  +  V N+E A+ + Y   +  +  D  TY ++ + CA L+S+E+G ++H 
Sbjct: 50  TFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHG 109

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            I + G+  D  V  S L+ M+  CG ++    VF  +D   V  W+ ++  ++  G + 
Sbjct: 110 YIFKRGLEGDLFVQNS-LINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWS 168

Query: 181 ESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSRRVKDAH-KLFDELSDRDVVSWNCM 238
           E L +F +M   G    +      VL     +G     +  H  L   + + +V+    +
Sbjct: 169 ECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSL 228

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I  Y+  G  EKGL +F+ M+     +  + M+T        G  M GR + A  + +  
Sbjct: 229 IDMYVKCGCIEKGLSLFQRMVKKN-QLSYSVMIT--------GLAMHGRGMEALQVFSDM 279

Query: 299 SKE-ISFNNTL-LDMYSKC---GDLDGAIRVFEKMG-----ERSVVSWTSMIAGYAREGV 348
            +E +  ++ + L + S C   G +D  ++ F +M      E ++  +  ++    R G+
Sbjct: 280 LEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGM 339

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE-NDMQSSLYVSN 407
            + A+   R M    I+P+      +L AC     LEIG+     + E N      YV  
Sbjct: 340 LNKALEHIRSM---PIKPNEVVWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYV-- 394

Query: 408 ALMDMYAKCGSMADAESVFNQMPVK 432
            L +MYA+     D   +  +M  K
Sbjct: 395 VLSNMYARAKRWEDVAKIRTEMARK 419


>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/594 (36%), Positives = 343/594 (57%), Gaps = 14/594 (2%)

Query: 250 KGLEVFK--EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
           + +E+F+  E+ + G+ V  +T   ++S C    ++   + V  + + + F  ++   N 
Sbjct: 99  EAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNR 158

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           +L M+ KCG +  A ++F++M E+ V SW +M+ G    G F  A RLF  M +E  +  
Sbjct: 159 VLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGR 218

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
                +++ A A  GL+++GK +H    +  +    +VS AL+DMY+KCGS+ DA  VF+
Sbjct: 219 SRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFD 278

Query: 428 QMPVKDIVSWNTMIG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALER 476
           QMP K  V WN++I           AL L+  M  +    D  T++ ++  CA LA+LE 
Sbjct: 279 QMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEH 338

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
            ++ H  ++RHG + D     A+VD Y K G +  AR +F+ +  K++ISW  +IAGYG 
Sbjct: 339 AKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGN 398

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG G +A+  F  M Q G+ P  V+F++VL ACS+SGL   GW  F  M+ +  ++P+  
Sbjct: 399 HGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAM 458

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HYACM++LL R   L EAY  I   P  P A +W +LL  CR+H  ++L +  AE ++ +
Sbjct: 459 HYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGM 518

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           EP+    Y++L N+Y  + K +E   + + + ++GL+  P CSW+E+K +   F+ G  S
Sbjct: 519 EPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKS 578

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP 776
           H   K+I   +  L +E+ + GY  +    L + DE E+ + L  HSEKLA+AFG++N P
Sbjct: 579 HSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEEQRI-LKYHSEKLAIAFGLINTP 637

Query: 777 AGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               +++T+  RVCGDCH   K ++    REIV+RD++RFHHF++G CSC  +W
Sbjct: 638 HWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 211/453 (46%), Gaps = 47/453 (10%)

Query: 25  KFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAME 84
           K   Y    +P++  ++   + + + + + I K +VC   N + E     E+  LE    
Sbjct: 59  KKVEYMERNVPVLEDTQIRKT-SPSGLCSQIEKLVVC---NRHREAMELFEILELEH--- 111

Query: 85  VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT 144
                +   +   TY +++  C  L+S+   K+V + +  SG   D  V+ ++++FM V 
Sbjct: 112 -----DGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVM-NRVLFMHVK 165

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
           CG + + R++F+++    V  W  ++     TGNF E+  LF  M        S TF+ +
Sbjct: 166 CGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATM 225

Query: 205 LKCLAVVGNSR--------------------------------RVKDAHKLFDELSDRDV 232
           ++  A +G  +                                 ++DAH +FD++ ++  
Sbjct: 226 IRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTT 285

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
           V WN +I+ Y  +G +E+ L ++ EM + G  VD  T+  V+  CA   +L   +  HA 
Sbjct: 286 VGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAA 345

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
            ++  F+ +I  N  L+D YSK G ++ A  VF +M  ++V+SW ++IAGY   G    A
Sbjct: 346 LVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEA 405

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM-D 411
           + +F  M++EG+ P      ++L AC+  GL + G ++   +K +       +  A M +
Sbjct: 406 VEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIE 465

Query: 412 MYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
           +  +   + +A ++    P K   + W  ++ A
Sbjct: 466 LLGRESLLDEAYALIRTAPFKPTANMWAALLTA 498


>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Brachypodium distachyon]
          Length = 706

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 245/704 (34%), Positives = 382/704 (54%), Gaps = 39/704 (5%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
            V  G+++  R  F+ +       +N L+  Y +      +L LF +M S     D  ++
Sbjct: 27  LVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS----RDLGSY 82

Query: 202 SCVLKCLAVVGNSRRVKDAHKLFDELS-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLN 260
           + ++  L++  ++  + DA      +     VVS+  ++ GY+ +G+    + +F +M  
Sbjct: 83  NALIAGLSLRRHT--LPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQMPE 140

Query: 261 LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDG 320
                   T   +L G  + G +   R +          K++     +L  Y + G +  
Sbjct: 141 RNH----VTYTVLLGGFLDAGRVNEARKL----FDEMPDKDVVARTAMLSGYCQAGRITE 192

Query: 321 AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI--TSILHAC 378
           A  +F++M +R+VVSWT+MI+GYA+ G    A +LF  M      PD   +  T++L   
Sbjct: 193 ARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVM------PDRNEVSWTAMLVGY 246

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
              G +E  +D+ + + ++ + +     NA+M  + + G +  A+++F +M  +D  +W+
Sbjct: 247 IQAGHVEDAEDLFNAMPDHPVAAC----NAMMVGFGQHGMVDAAKAMFERMCARDDGTWS 302

Query: 439 TMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRH 487
            MI           AL  F  ML +   P+  +   IL  CA+LA  + GRE+H  +LR 
Sbjct: 303 AMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRC 362

Query: 488 GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATF 547
               D    +A++ MY+KCG L  A+ +F+M   KD++ W  MI GY  HG G +A+  F
Sbjct: 363 SFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIF 422

Query: 548 NDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
           +D+R A + PD +++I VL ACS++G V EG   FN M    +I     HY+CMVDLL R
Sbjct: 423 DDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGR 482

Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLL 667
            G + EA   I  MPV PDA IWG+L+  CR+H   ++AE  A+ + ELEP + G YVLL
Sbjct: 483 AGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLL 542

Query: 668 ANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS-SHPHAKKIESL 726
           +++Y    +WE+   +R+ IS R L K+PGCSWIE    V++F +G   SHP    I ++
Sbjct: 543 SHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNM 602

Query: 727 LKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKN 786
           L+ L   +   GY     + L + DE +K  +L  HSE+ A+A+G+L +PAG  IRV KN
Sbjct: 603 LEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKN 662

Query: 787 LRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           LRVCGDCH   K ++K   REI+LRD+NRFHHFKDG CSCR +W
Sbjct: 663 LRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 89/171 (52%), Gaps = 9/171 (5%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + +  ++ SIL +CA L + + G+++H+ +       D   + S L+ M++ CG+L + +
Sbjct: 330 RPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAV-SALITMYIKCGNLDKAK 388

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           RVFN  +   V +WN ++  Y++ G  +E+L +F  ++   +A D  T+  VL   +  G
Sbjct: 389 RVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTG 448

Query: 213 NSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEM 258
              +VK+  ++F+ +     +      ++CM+      G+ ++ L++   M
Sbjct: 449 ---KVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNM 496



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/334 (22%), Positives = 142/334 (42%), Gaps = 57/334 (17%)

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLF---- 447
           ++  +NA +    + G++  A + F+ MP++   S+N +I           AL LF    
Sbjct: 16  AVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMP 75

Query: 448 -------------VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD-- 492
                        +++ ++  PD       +P   S+ +      + GY+ RHG+ AD  
Sbjct: 76  SRDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFT--SLLRGYV-RHGLLADAI 132

Query: 493 --------RNVANAIVDM--YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
                   RN     V +  ++  G +  AR LFD +P KD+++ T M++GY   G   +
Sbjct: 133 RLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITE 192

Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMV 602
           A A F++M +  +    VS+ +++   + +G V    + F +M     +      +  M+
Sbjct: 193 ARALFDEMPKRNV----VSWTAMISGYAQNGKVILARKLFEVMPDRNEVS-----WTAML 243

Query: 603 DLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTG 662
               + G++ +A      MP  P A    +++ G   H  V  A+ + E +      + G
Sbjct: 244 VGYIQAGHVEDAEDLFNAMPDHPVAAC-NAMMVGFGQHGMVDAAKAMFERMCA---RDDG 299

Query: 663 YYVLLANVYAEAE-KWEEVKKLREKISRRGLKKN 695
            +  +  VY + E   E +   RE +  RG++ N
Sbjct: 300 TWSAMIKVYEQNEFLMEALSTFREMLC-RGIRPN 332


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/544 (38%), Positives = 320/544 (58%), Gaps = 12/544 (2%)

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
           F  +    N +L M+ KCG +  A R+F++M ER++VSW ++I+G    G F  A RLF 
Sbjct: 6   FEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFL 65

Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
            M  E  +   +    ++ A A   L+ IG+ +H    +  +   ++VS AL+DMY+KCG
Sbjct: 66  NMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCG 125

Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILP 466
           S+ DA  VF +MP K  V WNT+I           ALD++  M  +  + D  T + I+ 
Sbjct: 126 SIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVR 185

Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
            CA LA++E  ++ H  ++RHG  +D     A+VD Y K G +  AR +FD + +K++IS
Sbjct: 186 ICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVIS 245

Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           W  +I GYG HG G +A+  F  M Q  + P+ ++F++VL ACSHSGL + GW  F  M 
Sbjct: 246 WNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMG 305

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
            +  I+P+  HYACM++L+ R G L EA   I   P  P A +W +LL  CR++   +L 
Sbjct: 306 RDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFELG 365

Query: 647 EKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGK 706
           +  AE ++ +EPD    Y++L N+Y  A   +E   +   + R+GL+  P CSWIE+K +
Sbjct: 366 KFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRR 425

Query: 707 VNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKL 766
            ++F++G + HP  K+I   + +L LE+ + GY P  +  L + DE E+ V L  HSEKL
Sbjct: 426 PHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRLY-HSEKL 484

Query: 767 AMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSC 826
           A+AFG+++ P    +++ +  R+CGDCHE  K +++   REIV+RD+ RFHHFK G CSC
Sbjct: 485 AIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHGHCSC 544

Query: 827 RGFW 830
             +W
Sbjct: 545 EDYW 548



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 194/412 (47%), Gaps = 56/412 (13%)

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           DA +LFDE+ +R++VSWN +ISG +  G   +   +F  M     +    T   ++   A
Sbjct: 28  DARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASA 87

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
               +  GR +HA  LK     +I  +  L+DMYSKCG ++ A  VFE+M E++ V W +
Sbjct: 88  GLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNT 147

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           +IAGYA  G  + A+ ++  M   G++ D +  + I+  CA    +E  K  H  +  + 
Sbjct: 148 IIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHG 207

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFV 448
             S +  + AL+D Y+K G + DA  VF++M  K+++SWN +IG          A++LF 
Sbjct: 208 FGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFE 267

Query: 449 AMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
            M+Q    P+ +T   +L AC+     ERG EI   + R      R        M+  C 
Sbjct: 268 QMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRA-------MHYAC- 319

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
                                 MI   G  G   +A+A    +R A  +P    + ++L 
Sbjct: 320 ----------------------MIELMGREGLLDEALAL---IRGAPFKPTANMWAALLT 354

Query: 568 ACSHSGLVDEGWRFFNMMRYECN----IEP-KLEHYACMVDLLSRTGNLSEA 614
           AC     V+E    F + ++       +EP KL +Y  ++++ +  GNL EA
Sbjct: 355 ACR----VNEN---FELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEA 399



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 180/378 (47%), Gaps = 43/378 (11%)

Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           D  + ++++ M V CG + + RR+F+++    +  WN ++      G+F E+  LF  M 
Sbjct: 9   DQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMW 68

Query: 191 SLGIAADSYTFSCVLKC---LAVVGNSRR-----------------------------VK 218
                A S+TF+ +++    L ++   R+                             ++
Sbjct: 69  EEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIE 128

Query: 219 DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCA 278
           DA  +F+E+ ++  V WN +I+GY  +G +E+ L+++ EM + G  +D  T   ++  CA
Sbjct: 129 DARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICA 188

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
              ++   +  HA  ++  F  +I  N  L+D YSK G ++ A  VF+KM  ++V+SW +
Sbjct: 189 RLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNA 248

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KEN 397
           +I GY   G    A+ LF  M++E + P+     ++L AC+  GL E G ++   + ++N
Sbjct: 249 LIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDN 308

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA--------LDLFV 448
            ++        ++++  + G + +A ++    P K   + W  ++ A        L  F 
Sbjct: 309 RIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFELGKFA 368

Query: 449 A-MLQNFEPDGVTMACIL 465
           A  L   EPD +    +L
Sbjct: 369 AEKLYGMEPDKLNNYIVL 386



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 148/287 (51%), Gaps = 17/287 (5%)

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           +N  +   Y+ N ++ M+ KCG M DA  +F++MP +++VSWNT+I           A  
Sbjct: 3   DNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFR 62

Query: 446 LFVAMLQNFEPDG-VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           LF+ M + F   G  T A ++ A A L  +  GR++H   L+ GI  D  V+ A++DMY 
Sbjct: 63  LFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYS 122

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG +  AR +F+ +P K  + W  +IAGY +HG+  +A+  + +MR +G++ D  +F  
Sbjct: 123 KCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSM 182

Query: 565 VLYACSHSGLVDEGWR-FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           ++  C+    V+   +    ++R+       +     +VD  S+ G + +A    + M  
Sbjct: 183 IVRICARLASVEHAKQAHAALIRH--GFGSDIVANTALVDFYSKWGRIEDARHVFDKM-A 239

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLA 668
           + +   W +L+ G   H     A ++ E + +  + P++  +  +L+
Sbjct: 240 SKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLS 286



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/411 (22%), Positives = 180/411 (43%), Gaps = 83/411 (20%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I    +VG+  +A  +  +   E S   + T+  +++  A L+ +  G+++H+  
Sbjct: 43  SWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACT 102

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + GI  DD  +   L+ M+  CG +++ R VF ++       WN ++  Y+  G  +E+
Sbjct: 103 LKMGIG-DDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEA 161

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA-----------------------VVGNSR---- 215
           L ++ +M+  G+  D +TFS +++  A                       +V N+     
Sbjct: 162 LDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDF 221

Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R++DA  +FD+++ ++V+SWN +I GY  +G   + +E+F++M+    N +  T 
Sbjct: 222 YSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITF 281

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           + VLS C++ G    G                                     +F+ MG 
Sbjct: 282 LAVLSACSHSGLSERG-----------------------------------WEIFQSMGR 306

Query: 331 RSVVS-----WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
            + +      +  MI    REG+ D A+ L RG      +P      ++L AC  +   E
Sbjct: 307 DNRIKPRAMHYACMIELMGREGLLDEALALIRG---APFKPTANMWAALLTACRVNENFE 363

Query: 386 IGKDVHD--YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
           +GK   +  Y  E D  ++  V   L+++Y   G++ +A  V + +  K +
Sbjct: 364 LGKFAAEKLYGMEPDKLNNYIV---LLNIYNSAGNLKEAADVVHTLKRKGL 411



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 2/157 (1%)

Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDA 543
           ++ +G   D+ + N ++ M+VKCG+++ AR LFD +P ++L+SW  +I+G    G   +A
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 544 IATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVD 603
              F +M +   +    +F  ++ A +   L+  G R  +    +  I   +     ++D
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIG-RQLHACTLKMGIGDDIFVSCALID 119

Query: 604 LLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           + S+ G++ +A    E MP       W +++ G  +H
Sbjct: 120 MYSKCGSIEDARFVFEEMP-EKTTVGWNTIIAGYALH 155


>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/616 (36%), Positives = 343/616 (55%), Gaps = 52/616 (8%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL-LDMYSKCGDLDGAIR 323
           + L+ + T L  C N     F R +    L    S   + +  L     S    LD +++
Sbjct: 27  ITLSILETHLHNCHNLKQ--FNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQ 84

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           +F+++   +   W +M+  Y +    + A+ L++ MV+  + PD Y    ++ ACA   L
Sbjct: 85  IFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLL 144

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
              GK++HD++ +    S +YV N L++MYA CG+M DA  +F++ PV D VSWN+++  
Sbjct: 145 EFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAG 204

Query: 443 -------------------------------------------ALDLFVAMLQN-FEPDG 458
                                                      AL +F+ M  N    D 
Sbjct: 205 YVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDE 264

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV----DMYVKCGVLVLARS 514
           V +  +L ACA L+ ++ G+ IHG ++R GI +  N+ NA++    DMY+KCG +  A  
Sbjct: 265 VVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALE 324

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +F+ +  K + SW  +I G  ++G    ++  F++M+  G+ P+E++F+ VL AC H GL
Sbjct: 325 VFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGL 384

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           VDEG   F  M  +  IEP ++HY CMVDLL R G L+EA + IE MP+APD   WG+LL
Sbjct: 385 VDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALL 444

Query: 635 CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
             C+ H + ++ E+V   + EL+PD+ G++VLL+N++A    WE+V ++R  + ++G+ K
Sbjct: 445 GACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVK 504

Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
            PGCS IE  G V+ F+AG  +HP   K+E +L  +   +K EGY P T    ++ DE E
Sbjct: 505 TPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEE 564

Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
           KE  L  HSEKLA+AFG+L +     IR+ KNLR+C DCH  AK +SK   REIV+RD +
Sbjct: 565 KETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRH 624

Query: 815 RFHHFKDGRCSCRGFW 830
           RFH+FK+G CSC  +W
Sbjct: 625 RFHYFKEGACSCMDYW 640



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 194/387 (50%), Gaps = 46/387 (11%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLE-DGKKVHSII 122
           +N  +  + +  + EKA+ +     K+ +  D  TY  ++Q CA ++ LE  GK++H  +
Sbjct: 97  WNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHV 155

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G   D                                V++ N L++ Y+  GN +++
Sbjct: 156 LKVGFDSD--------------------------------VYVQNTLINMYAVCGNMRDA 183

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGY 242
             LF +   L    DS +++ +L      G+  +V +A KLF+E+ ++D+VSW+ +ISGY
Sbjct: 184 RKLFDESPVL----DSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGY 239

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             NG+ E+ L +F EM   G  +D   +V+VLS CA+   +  G+ +H   ++      +
Sbjct: 240 EQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYV 299

Query: 303 SFNNTLL----DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
           +  N L+    DMY KCG ++ A+ VF  M E+ V SW ++I G A  G+ + ++ +F  
Sbjct: 300 NLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSE 359

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGK-DVHDYIKENDMQSSLYVSNALMDMYAKCG 417
           M   G+ P+      +L AC   GL++ G+      I+++ ++ ++     ++D+  + G
Sbjct: 360 MKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAG 419

Query: 418 SMADAESVFNQMPV-KDIVSWNTMIGA 443
            + +AE +   MP+  D+ +W  ++GA
Sbjct: 420 LLNEAEKLIESMPMAPDVATWGALLGA 446


>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 217/499 (43%), Positives = 302/499 (60%), Gaps = 19/499 (3%)

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           YA  G  D ++ LF G  +    P V+  T+I+H  A  G +   + + D + E     S
Sbjct: 72  YASLGRLDYSVALF-GRTQN---PSVFFWTAIIHGHALRGDVVSAQQLFDTMPE----KS 123

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ 452
           L    A++  YAK G +  A  +F+ M  +D V WN MI           AL LF  ML+
Sbjct: 124 LVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK 183

Query: 453 -NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
              +P+ VT+  +L AC  L ALE GR +H YI  +GI  + +V  A+VDMY KCG L  
Sbjct: 184 AKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLED 243

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           AR +FD I  KD+++W  MI GY MHGF  +A+  F  M + G+ P  ++FI +L AC H
Sbjct: 244 ARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGH 303

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           SG V EGW  FN M+ E  IEPK+EHY CMV+LL R G++ +AY  ++ M + PD  +WG
Sbjct: 304 SGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWG 363

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           +LL  CR+H ++ L EK+ E + +    N+G Y+LL+N+YA    W+ V +LR  +   G
Sbjct: 364 TLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSG 423

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
           +KK PGCS IE+  KV+ F+AGG +HP  K+I  +L+ +   +K  GY P+T   L +  
Sbjct: 424 VKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIG 483

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           E EKE +L  HSEKLA+AFG++N   G TI++ KNLRVC DCHE+ K +SK   R+IV+R
Sbjct: 484 ETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVR 543

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           D NRFHHF +G CSC  +W
Sbjct: 544 DRNRFHHFVNGSCSCGDYW 562



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 10/339 (2%)

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLL 169
           K++    ++H+++   G+     +L  KL   + + G L     +F +  N  VF W  +
Sbjct: 41  KTISHLLQIHAVLFRHGL-DHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAI 99

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD 229
           +H ++  G+   +  LF  M    +     + + +L C A  G    +  A  LFD + +
Sbjct: 100 IHGHALRGDVVSAQQLFDTMPEKSLV----SLTAMLTCYAKHG---ELDAARVLFDGMEE 152

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           RD V WN MI GY  NG+  + L +F+ ML      +  T+++VLS C   GAL  GR V
Sbjct: 153 RDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWV 212

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H++         +     L+DMYSKCG L+ A  VF+K+ ++ VV+W SMI GYA  G  
Sbjct: 213 HSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFS 272

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNA 408
             A++LF+ M R G+ P       IL AC   G +  G D+ + +K E  ++  +     
Sbjct: 273 QEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGC 332

Query: 409 LMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
           ++++  + G +  A  +   M ++ D V W T++GA  L
Sbjct: 333 MVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRL 371



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 17/276 (6%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +N  I  + + G   +A+ VL+      K+K +  T  S+L  C  L +LE G+ VHS I
Sbjct: 158 WNVMIDGYTQNGMPNEAL-VLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 216

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             +GI  +  V G+ LV M+  CG L++ R VF+KID+  V  WN ++  Y+  G  +E+
Sbjct: 217 ENNGIQFNVHV-GTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEA 275

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVVSWNC 237
           L LFK M  +G+   + TF   +  L+  G+S  V +   +F+++ D       +  + C
Sbjct: 276 LQLFKSMCRMGLHPTNITF---IGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGC 332

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           M++     G  E+  E+ K   N+    D     T+L  C   G +  G  +    +   
Sbjct: 333 MVNLLGRAGHVEQAYELVK---NMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQN 389

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
            +   ++   L ++Y+  G+ DG  R+   M +  V
Sbjct: 390 LANSGTY-ILLSNIYAAVGNWDGVARLRTMMKDSGV 424


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/730 (32%), Positives = 371/730 (50%), Gaps = 53/730 (7%)

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           LK          N +  + NL +   +K GN +E     + M  +GI+ +  ++  + K 
Sbjct: 42  LKSSHSSLRTHQNQQGQVENLHLISLAKQGNLREVHEFIRNMDKVGISINPRSYEYLFKM 101

Query: 208 LAVVG----------------NSRRVKD---------------AHKLFDELSDRDVVSWN 236
              +G                NS +  D               A + FD++ D+D+ SW+
Sbjct: 102 CGTLGALSDGKLFHNRLQRMANSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWS 161

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 296
            +IS Y   G  ++ + +F  ML+LG   + +   T++    +   L  G+ +H+  ++ 
Sbjct: 162 TIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRI 221

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            F+  IS    + +MY KCG LDGA     KM  ++ V+ T ++ GY +      A+ LF
Sbjct: 222 GFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLF 281

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
             M+ EG+E D +  + IL ACA  G L  GK +H Y  +  ++S + V   L+D Y KC
Sbjct: 282 GKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKC 341

Query: 417 GSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNFEPDGVTMAC-----IL 465
                A   F  +   +  SW+ +I      G  D  + + +     GV +       I 
Sbjct: 342 ARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIF 401

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
            AC++++ L  G +IH   ++ G+ A  +  +A++ MY KCG +  A   F  I   D +
Sbjct: 402 QACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTV 461

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           +WT +I  +  HG   +A+  F +M+ +G+ P+ V+FI +L ACSHSGLV EG +  + M
Sbjct: 462 AWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSM 521

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
             E  + P ++HY CM+D+ SR G L EA   I  +P  PD   W SLL GC  H  +++
Sbjct: 522 SDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEI 581

Query: 646 AEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
               A+++F L+P ++  YV++ N+YA A KW+E  + R+ ++ R L+K   CSWI +KG
Sbjct: 582 GMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKG 641

Query: 706 KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA-----DEMEKEVALC 760
           KV+ FV G   HP  ++I S LK L         F K++  L+N      D  E++  L 
Sbjct: 642 KVHRFVVGDRHHPQTEQIYSKLKELNFS------FKKSKERLLNEENALCDFTERKEQLL 695

Query: 761 GHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFK 820
            HSE+LA+A+G++   A   I V KN R C DCH+ AK +S    RE+V+RD NRFHH  
Sbjct: 696 DHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHDFAKRVSIVTGRELVVRDGNRFHHIN 755

Query: 821 DGRCSCRGFW 830
            G CSCR +W
Sbjct: 756 SGECSCRDYW 765



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/571 (24%), Positives = 257/571 (45%), Gaps = 60/571 (10%)

Query: 67  NAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII-- 122
           N  +    + GNL +  E + + +K    I+ ++Y  + ++C  L +L DGK  H+ +  
Sbjct: 61  NLHLISLAKQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQR 120

Query: 123 -CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
              S   ID+ +L      M+  C       R F+KI +  +  W+ ++  Y++ G   E
Sbjct: 121 MANSNKFIDNCILK-----MYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDE 175

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKC----------------LAVVGNSRRVK------- 218
           ++ LF +M  LGI  +S  FS ++                  L  +G +  +        
Sbjct: 176 AVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISN 235

Query: 219 ---------DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                     A    ++++ ++ V+   ++ GY         L +F +M++ G  +D   
Sbjct: 236 MYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFV 295

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
              +L  CA  G L  G+ +H++ +K     E+S    L+D Y KC   + A + FE + 
Sbjct: 296 FSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIH 355

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           E +  SW+++IAGY + G FD A+ +F+ +  +G+  + +  T+I  AC+    L  G  
Sbjct: 356 EPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQ 415

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-------- 441
           +H    +  + + L   +A++ MY+KCG +  A   F  +   D V+W  +I        
Sbjct: 416 IHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGK 475

Query: 442 --GALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVAN 497
              AL LF  M      P+ VT   +L AC+    ++ G++I   +   +G++   +  N
Sbjct: 476 AFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYN 535

Query: 498 AIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH-GFGCDAIATFNDMRQAGI 555
            ++D+Y + G+L  A  +   +P   D++SW  ++ G   H       IA  N  R   +
Sbjct: 536 CMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFR---L 592

Query: 556 EP-DEVSFISVLYACSHSGLVDEGWRFFNMM 585
           +P D  +++ +    + +G  DE  +F  MM
Sbjct: 593 DPLDSATYVIMFNLYALAGKWDEAAQFRKMM 623



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 197/415 (47%), Gaps = 37/415 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           +++  I  + E G +++A+ +        I  ++  + +++    D   L+ GK++HS +
Sbjct: 159 SWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQL 218

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G   +  +  + +  M+V CG L       NK+          LM  Y+K    +++
Sbjct: 219 IRIGFAANISI-ETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDA 277

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGN----------------------------- 213
           L LF KM S G+  D + FS +LK  A +G+                             
Sbjct: 278 LLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDF 337

Query: 214 ---SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                R + A + F+ + + +  SW+ +I+GY  +G  ++ LEVFK + + G  ++    
Sbjct: 338 YVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIY 397

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             +   C+    L+ G  +HA A+K      +S  + ++ MYSKCG +D A + F  + +
Sbjct: 398 TNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDK 457

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
              V+WT++I  +A  G    A+RLF+ M   G+ P+      +L+AC+  GL++ GK +
Sbjct: 458 PDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKI 517

Query: 391 HDYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            D +  E  +  ++   N ++D+Y++ G + +A  V   +P + D++SW +++G 
Sbjct: 518 LDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGG 572


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/560 (38%), Positives = 331/560 (59%), Gaps = 14/560 (2%)

Query: 285 FGRAVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
            GRA HA  +K   +   SF  N L++MYSK    + A  +      RSVV+WT++IAG 
Sbjct: 24  LGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGS 83

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL 403
            + G F  A+  F  M R+ I+P+ +       A        +GK VH    +    S +
Sbjct: 84  VQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFV-AMLQ 452
           +V  +  DMY+K G   +A  +F++MP ++I +WN  +           AL  F+ A  +
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKE 203

Query: 453 NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
             EP    ++ +L ACA L+ LE G+ +H   ++  +  +  V +A+VDMY KCG +  A
Sbjct: 204 GIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDA 263

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG--IEPDEVSFISVLYACS 570
              FD +P ++L++W  MI GY   G    A+  F++M      + P+ V+F+ VL ACS
Sbjct: 264 ERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACS 323

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
            +G V+ G   F  MR    IEP  EHYAC+VDLL R G + +AY+FI+ MP+ P  ++W
Sbjct: 324 RAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVW 383

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
           G+LL   ++  + +L +  A+++FEL+P ++G +VLL+N++A A +WEE   +R+++   
Sbjct: 384 GALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDV 443

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           G+KK  GCSWI     V++F A  +SH    +I+++L +LR EM+  GY P T +AL + 
Sbjct: 444 GIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDL 503

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           +E EK + +  HSEK+A+AFG++++PAG  IR+TKNLR+CGDCH   KF+S    REI++
Sbjct: 504 EEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIV 563

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RD+N FH F+D +CSCR +W
Sbjct: 564 RDNNLFHRFRDNQCSCRDYW 583



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 169/338 (50%), Gaps = 15/338 (4%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           R   A  L     +R VV+W  +I+G + NG     L  F  M       +  T      
Sbjct: 57  RPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFK 116

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
              +  + + G+ VHA A+KA    ++    +  DMYSK G  + A ++F++M ER++ +
Sbjct: 117 ASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIAT 176

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W + ++    EG +D A+  F    +EGIEP  + ++S+L ACA   +LE+GK VH    
Sbjct: 177 WNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAV 236

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           +  +  +++V +AL+DMY KCGS+ DAE  F++MP +++V+WN MIG          A+ 
Sbjct: 237 KACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVT 296

Query: 446 LFVAML---QNFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVD 501
           LF  M        P+ VT  C+L AC+   ++  G EI   +  R+GI         +VD
Sbjct: 297 LFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVD 356

Query: 502 MYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
           +  + G++  A      +P +  +S W  ++    M G
Sbjct: 357 LLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFG 394



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 175/432 (40%), Gaps = 93/432 (21%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+    +    L+S   GK+VH++  ++G  I D  +G     M+   G  +E R++F++
Sbjct: 110 TFPCAFKASGSLRSPLVGKQVHALAVKAG-QISDVFVGCSAFDMYSKAGLTEEARKMFDE 168

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------- 209
           +    +  WN  +      G + ++L  F + +  GI    +  S VL   A        
Sbjct: 169 MPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVG 228

Query: 210 -----------VVGN-------------SRRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
                      VVGN                ++DA + FDE+ +R++V+WN MI GY   
Sbjct: 229 KSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQ 288

Query: 246 GVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
           G A+  + +F EM      V  +  T V VLS C+  G++  G  +   +++  +  E  
Sbjct: 289 GQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFE-SMRGRYGIEPG 347

Query: 304 FNN--TLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAGYAREGVFDGAIRLFRGMV 360
             +   ++D+  + G ++ A +  +KM  R  VS W +++          GA ++F    
Sbjct: 348 AEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALL----------GASKMF---- 393

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND-MQSSLYVSNALMDMYAKCGSM 419
                                G  E+GK   D + E D + S  +V   L +M+A  G  
Sbjct: 394 ---------------------GKSELGKVAADNLFELDPLDSGNHV--LLSNMFAAAGRW 430

Query: 420 ADAESVFNQMPVKDI-------VSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLA 472
            +A  V  +M  KD+        SW T   A+ +F A   + E +    A        LA
Sbjct: 431 EEATLVRKEM--KDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAM-------LA 481

Query: 473 ALERGREIHGYI 484
            L    E  GYI
Sbjct: 482 KLRGEMEAAGYI 493



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 13/203 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSII 122
            +NA +      G  + A+     + K  I+   +   S+L  CA L  LE GK VH++ 
Sbjct: 176 TWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLA 235

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++  V+ +  +GS LV M+  CG +++  R F+++    +  WN ++  Y+  G    +
Sbjct: 236 VKA-CVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMA 294

Query: 183 LYLFKKMQ--SLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----W 235
           + LF +M   S  +A +  TF CVL   +  G+   V    ++F+ +  R  +      +
Sbjct: 295 VTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGS---VNVGMEIFESMRGRYGIEPGAEHY 351

Query: 236 NCMISGYIANGVAEKGLEVFKEM 258
            C++      G+ E+  +  K+M
Sbjct: 352 ACVVDLLGRAGMVEQAYQFIKKM 374


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/629 (37%), Positives = 346/629 (55%), Gaps = 19/629 (3%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A   F  ++  +  SWN +++ Y  NG       +F  M + G   +  T+ T L  C  
Sbjct: 86  AQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTA 145

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
              L  GR ++          +    ++L+ MY +C +++ A R F++  E+ VV WT+M
Sbjct: 146 ARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAM 205

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
           I+ YA       A+ L R M  EGI+  +    S+L ACA    L  G   H       +
Sbjct: 206 ISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGL 265

Query: 400 -QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFV 448
            +SS  V+  L+++Y KCG + DA  V + MPV+  VSW  MI A          ++LF 
Sbjct: 266 DRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQ 325

Query: 449 AM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRH-GISADRNVANAIVDMYVKC 506
            M L+  EP  +T+  ++ +CA L  L  G+ IH  I      S    + NA++ MY KC
Sbjct: 326 CMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKC 385

Query: 507 GVLVLARSLFDMIP--AKDLISWTIMIAGYGMHGFGCDAIATFNDMR-QAGIEPDEVSFI 563
           G L LAR +F+ +P   + +++WT MI  Y  +G G +AI  F +M    G EP+ V+F+
Sbjct: 386 GNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFL 445

Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI-EMMP 622
           SVL ACSH G +++ W  F  M  +  + P  +HY C+VDLL R G L EA + +     
Sbjct: 446 SVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKD 505

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
              D   W + L  C+++ +++ +++ A+ V ELEP+N    VLL+NVYA   +  +V +
Sbjct: 506 FEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVAR 565

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +R ++   G+KK  G SWIEI  +V+ F+    SHP   +I S L+RL  E+K  GY P 
Sbjct: 566 IRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPD 625

Query: 743 TRYALINADEMEKEVALCG-HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
           T+  L + DE EK+V L G HSE+LAMA GI++ P G T+RV KNLRVC DCH   KF+S
Sbjct: 626 TKMVLRDVDE-EKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFIS 684

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +   R+I++RD++RFHHFKDG CSC  +W
Sbjct: 685 QIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 208/434 (47%), Gaps = 52/434 (11%)

Query: 94  IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
           +    Y S+L  C   + L++ +K+H+ I    +   +  LG+ LV  +   G L   + 
Sbjct: 33  VSINDYASLLWQC---RGLDEVRKLHAQIAARKL-DRNTFLGNVLVDAYSKHGSLHGAQL 88

Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS-CVLKCLA--- 209
            F +I       WN+LM  Y++ G+ + +  LF  M S G+  ++ T S  +L C A   
Sbjct: 89  AFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARN 148

Query: 210 ----------------------------VVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
                                       + G  R +++A + FD   ++DVV W  MIS 
Sbjct: 149 LALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISA 208

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           Y  N    + LE+ + M   G  + L T V++L  CA+   L  G A H  A      + 
Sbjct: 209 YAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRS 268

Query: 302 IS-FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
            +    TL+++Y KCG +D A RV + M  R+ VSWT+MIA YA+ G    AI LF+ M 
Sbjct: 269 STVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMD 328

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSM 419
            EG EP    + S++ +CA  G L +GK +H  I+ +     SL + NA++ MY KCG++
Sbjct: 329 LEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNL 388

Query: 420 ADAESVFNQMPV--KDIVSWNTMIG----------ALDLFVAMLQN--FEPDGVTMACIL 465
             A  VF  +P+  + +V+W  MI           A++LF  ML +   EP+ VT   +L
Sbjct: 389 ELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVL 448

Query: 466 PACASLAALERGRE 479
            AC+ L  LE+  E
Sbjct: 449 CACSHLGQLEQAWE 462



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 192/410 (46%), Gaps = 26/410 (6%)

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTS 338
            C  L   R +HA        +     N L+D YSK G L GA   F ++   +  SW  
Sbjct: 44  QCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNI 103

Query: 339 MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND 398
           ++A YA+ G   GA  LF  M  +G+ P+   +++ L AC     L +G+ +++ I    
Sbjct: 104 LMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEA 163

Query: 399 MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA------LDLFVAMLQ 452
           ++   +V ++L+ MY +C  + +AE  F++ P KD+V W  MI A          + +++
Sbjct: 164 LEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVR 223

Query: 453 NFEPDGV-----TMACILPACASLAALERGREIHGYILRHGISADRN---VANAIVDMYV 504
             + +G+     T   +L ACAS   L  G   H       I  DR+   VA  +V++Y 
Sbjct: 224 RMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAA--AIGLDRSSTVVAGTLVNLYG 281

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG +  AR + D +P +  +SWT MIA Y  +G   +AI  F  M   G EP +++ IS
Sbjct: 282 KCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLIS 341

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           V+ +C+  G +  G R    +R   +    L     ++ +  + GNL  A    E +P+ 
Sbjct: 342 VVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLR 401

Query: 625 PDATI-WGSLLCGCRIHHEVKLAEKVAEHVFEL------EPDNTGYYVLL 667
             + + W +++   R + +  + E+  E   E+      EP+   +  +L
Sbjct: 402 TRSVVTWTAMI---RAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVL 448



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 42/268 (15%)

Query: 54  SISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKS 111
           S  K +VC    + A I  +       +A+E++     E  K+   TY S+L  CA    
Sbjct: 194 SPEKDVVC----WTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMD 249

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           L +G   H      G+     V+   LV ++  CG + + RRV + +       W  ++ 
Sbjct: 250 LRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIA 309

Query: 172 EYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-------SRRVKD----- 219
            Y++ GN  E++ LF+ M   G      T   V+   AV+G          R++      
Sbjct: 310 AYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFS 369

Query: 220 ---------------------AHKLFD--ELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
                                A ++F+   L  R VV+W  MI  Y  NGV E+ +E+F+
Sbjct: 370 QSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQ 429

Query: 257 EML-NLGFNVDLATMVTVLSGCANCGAL 283
           EML + G   +  T ++VL  C++ G L
Sbjct: 430 EMLIDGGTEPNRVTFLSVLCACSHLGQL 457


>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
 gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/508 (42%), Positives = 307/508 (60%), Gaps = 13/508 (2%)

Query: 336 WTSMIAGYAREG-VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
           + ++I  YA+ G   D A+ L+  M+ + I P+ +    +L ACA   +L +G+ VH  +
Sbjct: 99  FNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSV 158

Query: 395 KENDMQSSLYVSNALMDMYAKC-GSMADAESVFNQMPVKDIVSWNTMIG----------A 443
            +      ++V N ++ MY+ C G +  A  VF++MP  D V+W+ MIG          A
Sbjct: 159 VKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 218

Query: 444 LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           + LF  M +    PD +TM  +L AC  L ALE G+ I  YI RH I     V+NA++DM
Sbjct: 219 VALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDM 278

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           + KCG +  A  LF  +  K ++SWT +I G  MHG G +A   F +M  +G+ PD+V+F
Sbjct: 279 FAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAF 338

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           I +L ACSHSGLV+ G  +F  M  +  + PK+EHY CMVD+  RTG + EA  F+  MP
Sbjct: 339 IGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMP 398

Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
           + P+  I  +L+  CR H E KL EK+ + + + EP +   YVLL+N+YA+   WE+  K
Sbjct: 399 IEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTK 458

Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
           +RE +  +G+KK PG + IEI  ++  FVAG  SH   K+I  ++  +  EMK+ GY P 
Sbjct: 459 IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPS 518

Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
           T   L++ +E +KE +L  HSEKLA+AFG+L  P G  IR+ KNLRVC DCH  +KF+SK
Sbjct: 519 TSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISK 578

Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
              REI++RD NRFHHFK G+CSC  FW
Sbjct: 579 IYDREIIMRDRNRFHHFKSGQCSCGDFW 606



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 173/354 (48%), Gaps = 16/354 (4%)

Query: 231 DVVSWNCMISGYIANGVA-EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           D   +N +I  Y   G + +K L ++  ML+     +  T   VL  CA    L  G+ V
Sbjct: 95  DAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTV 154

Query: 290 HAFALKACFSKEISFNNTLLDMYSKC-GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           H   +K  F  +I   NT++ MYS C G ++ A +VF++M +   V+W++MI GYAR G 
Sbjct: 155 HGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGR 214

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+ LFR M    + PD   + S+L AC   G LE+GK +  YI+ +++   + VSNA
Sbjct: 215 STEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNA 274

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD----------LFVAMLQN-FEPD 457
           L+DM+AKCG ++ A  +F  M  K IVSW ++I  +           LF  M  +   PD
Sbjct: 275 LIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPD 334

Query: 458 GVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLF 516
            V    +L AC+    +ERGRE  G ++ ++ +         +VDMY + G++  A    
Sbjct: 335 DVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFV 394

Query: 517 DMIP--AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
             +P     +I  T++ A  G   F      T   M+   +       +S +YA
Sbjct: 395 RNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYA 448



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 168/359 (46%), Gaps = 58/359 (16%)

Query: 164 FIWNLLMHEYSKTGNFKE-SLYLFKKMQSLGIAADSYTFSCVLKCLA----------VVG 212
           F++N L+  Y++TG+ K+ +L L+  M    I  + +T+  VLK  A          V G
Sbjct: 97  FLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHG 156

Query: 213 NSRR-----------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
           +  +                       +  A K+FDE+   D V+W+ MI GY   G + 
Sbjct: 157 SVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRST 216

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           + + +F+EM       D  TMV++LS C + GAL  G+ + A+  +    K +  +N L+
Sbjct: 217 EAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALI 276

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           DM++KCGD+  A+++F  M E+++VSWTS+I G A  G    A  LF  M   G+ PD  
Sbjct: 277 DMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDV 336

Query: 370 AITSILHACACDGLLEIGKDVH-DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
           A   +L AC+  GL+E G++     +K+  +   +     ++DMY + G + +A      
Sbjct: 337 AFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRN 396

Query: 429 MPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRH 487
           MP+                       EP+ V +  ++ AC      + G +I   +++H
Sbjct: 397 MPI-----------------------EPNPVILRTLVSACRGHGEFKLGEKITKLLMKH 432



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 154/380 (40%), Gaps = 72/380 (18%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC-GDLKEGRRVFN 156
           TY  +L+ CA L+ L  G+ VH  + + G   D  V  + +V M+  C G +   R+VF+
Sbjct: 134 TYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNT-MVHMYSCCAGGINSARKVFD 192

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG---- 212
           ++       W+ ++  Y++ G   E++ LF++MQ   +  D  T   +L     +G    
Sbjct: 193 EMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALEL 252

Query: 213 ----------------------------NSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
                                           +  A KLF  ++++ +VSW  +I G   
Sbjct: 253 GKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAM 312

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           +G  ++   +F+EM + G   D    + +LS C++ G +  GR                +
Sbjct: 313 HGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGR---------------EY 357

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
             +++  Y     ++                +  M+  Y R G+   A+   R M    I
Sbjct: 358 FGSMMKKYKLVPKIE---------------HYGCMVDMYCRTGLVKEALEFVRNM---PI 399

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQSSLYVSNALMDMYAKCGSMADAE 423
           EP+   + +++ AC   G  ++G+ +   + K   +  S YV   L ++YAK  S     
Sbjct: 400 EPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYV--LLSNIYAKTLSWEKKT 457

Query: 424 SVFNQMPVKDI--VSWNTMI 441
            +   M VK +  V  +TMI
Sbjct: 458 KIREVMEVKGMKKVPGSTMI 477


>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g01580
 gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/635 (35%), Positives = 353/635 (55%), Gaps = 47/635 (7%)

Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
           + R++F ++    ++ WN L+   S+   ++E LY F  M       D++T    LK   
Sbjct: 12  DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71

Query: 210 -------------------------VVGNSR--------RVKDAHKLFDELSDRDVVSWN 236
                                     VG+S         R+ +A ++FDEL   D+V+W+
Sbjct: 72  ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
            M+SG+  NG   + +E F+ M+       D  T++T++S C        GR VH F ++
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
             FS ++S  N+LL+ Y+K      A+ +F+ + E+ V+SW+++IA Y + G    A+ +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           F  M+ +G EP+V  +  +L ACA    LE G+  H+      +++ + VS AL+DMY K
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGALDL----------FVAML--QNFEPDGVTMAC 463
           C S  +A +VF+++P KD+VSW  +I    L          F  ML   N  PD + M  
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           +L +C+ L  LE+ +  H Y++++G  ++  +  ++V++Y +CG L  A  +F+ I  KD
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKD 431

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
            + WT +I GYG+HG G  A+ TFN M + + ++P+EV+F+S+L ACSH+GL+ EG R F
Sbjct: 432 TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIF 491

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
            +M  +  + P LEHYA +VDLL R G+L  A    + MP +P   I G+LL  CRIH  
Sbjct: 492 KLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQN 551

Query: 643 VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIE 702
            ++AE VA+ +FELE ++ GYY+L++NVY    +WE V+KLR  + +RG+KK    S IE
Sbjct: 552 GEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIE 611

Query: 703 IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
           I+ KV+ FVA    HP  + +  LLK L L MK +
Sbjct: 612 IRRKVHRFVADDELHPEKEPVYGLLKELDLHMKED 646



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 237/489 (48%), Gaps = 52/489 (10%)

Query: 84  EVLYS-----SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           EVLY       ++ K D  T    L+ C +L+ +  G+ +H  + +   +  D  +GS L
Sbjct: 43  EVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSL 102

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAAD 197
           ++M++ CG + E  R+F++++   +  W+ ++  + K G+  +++  F++M  +  +  D
Sbjct: 103 IYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPD 162

Query: 198 SYT--------------------------------FSCVLKCLAVVGNSRRVKDAHKLFD 225
             T                                 S V   L     SR  K+A  LF 
Sbjct: 163 RVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK 222

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            ++++DV+SW+ +I+ Y+ NG A + L VF +M++ G   ++AT++ VL  CA    L  
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           GR  H  A++     E+  +  L+DMY KC   + A  VF ++  + VVSW ++I+G+  
Sbjct: 283 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342

Query: 346 EGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
            G+   +I  F  M+ E    PD   +  +L +C+  G LE  K  H Y+ +    S+ +
Sbjct: 343 NGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPF 402

Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNF 454
           +  +L+++Y++CGS+ +A  VFN + +KD V W ++I           AL+ F  M+++ 
Sbjct: 403 IGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSS 462

Query: 455 E--PDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVL 511
           E  P+ VT   IL AC+    +  G  I   ++  + ++ +      +VD+  + G L  
Sbjct: 463 EVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDT 522

Query: 512 ARSLFDMIP 520
           A  +   +P
Sbjct: 523 AIEITKRMP 531


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/578 (35%), Positives = 347/578 (60%), Gaps = 13/578 (2%)

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +++T V +L  CA+  AL+ G+ VH+  +K  ++ +    N L++MY KCG +  A  VF
Sbjct: 23  EISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVF 82

Query: 326 EKMGERS--VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL 383
           +++ E++  V+SW  +I  Y + G+   A+ LF+ M  EG+  +   + + + ACA    
Sbjct: 83  DQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPS 142

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
            E G+ VH    +  ++S   V  +L++M+ KC ++  A +VF+ +P K++V+WN M+  
Sbjct: 143 EEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAV 202

Query: 443 ---------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
                    A+ +F  M L+  +PD VT   I+ ACA+LAA   GR +H  I   GI  D
Sbjct: 203 YSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMD 262

Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
             +  A++  Y KCG L  AR++FD +  K+ ++W+ ++A Y  +G+  +AI  +++M Q
Sbjct: 263 VALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQ 322

Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
            G+E + ++F+ +L+ACSH+G   +G  +F  M  +  + P  EHY  ++DLL R+G L 
Sbjct: 323 GGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQ 382

Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
            +   I  MP  PD++ W +LL  CR+H +V    ++AE ++EL+P+++G Y+LL+N+Y+
Sbjct: 383 LSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYS 442

Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRL 732
              + +E ++ R+ +  RG+ K PG S IE+K +V+ F+A    HP   +I + ++RL+ 
Sbjct: 443 STGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKA 502

Query: 733 EMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
            +K  GY    R  L + +E EKE  L  HSE+LA+AFG+++ P G  + + KNLRVC D
Sbjct: 503 RVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFD 562

Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CH   K +SK   R+IV+RD+ RFHHF++G CSC  +W
Sbjct: 563 CHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 195/390 (50%), Gaps = 37/390 (9%)

Query: 90  EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLK 149
           ++ + +  TY  +L+ CAD K+L +GK+VHS + + G    D ++ + L+ M+  CG + 
Sbjct: 18  DERREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYA-SDRLIANLLIEMYGKCGGIA 76

Query: 150 EGRRVFNKID--NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-----S 202
           E R VF++I   N  V  WN ++  Y++ G  KE+L+LFK M   G+ A+  T      +
Sbjct: 77  EARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDA 136

Query: 203 C----------VLKCLAV---------VGNS--------RRVKDAHKLFDELSDRDVVSW 235
           C          ++  +AV         VG S        + V  A  +FD L  +++V+W
Sbjct: 137 CASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTW 196

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
           N M++ Y  N   +K ++VF+ M   G   D  T +T++  CA   A   GR VH     
Sbjct: 197 NNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITA 256

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
           +    +++    ++  Y KCG LD A  +F+ +G+++ V+W++++A YA+ G    AI L
Sbjct: 257 SGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIEL 316

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH-DYIKENDMQSSLYVSNALMDMYA 414
           +  MV+ G+E +      +L AC+  G    G D     I++  +         L+D+  
Sbjct: 317 YHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLG 376

Query: 415 KCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           + G +  +E + N MP + D  +W  ++GA
Sbjct: 377 RSGQLQLSEDLINSMPYEPDSSAWLALLGA 406



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/406 (21%), Positives = 174/406 (42%), Gaps = 71/406 (17%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  IG + + G  ++A+ +  + +   +  +  T  + +  CA L S E+G+ VH+I 
Sbjct: 94  SWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIA 153

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +  +   D ++G+ LV MF  C ++   R VF+ +    +  WN ++  YS+    K++
Sbjct: 154 VDKRLE-SDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKA 212

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVV------------------------------- 211
           + +F+ M   G+  D+ TF  ++   A +                               
Sbjct: 213 IQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHF 272

Query: 212 -GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
            G   R+ +A  +FD L  ++ V+W+ +++ Y  NG   + +E++ EM+  G  V+  T 
Sbjct: 273 YGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITF 332

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           + +L  C++ G  M G               + +  +++  +       G + VFE    
Sbjct: 333 LGLLFACSHAGRSMDG---------------VDYFVSMIRDF-------GVVPVFEH--- 367

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
                + ++I    R G    +  L   M     EPD  A  ++L AC   G ++ G  +
Sbjct: 368 -----YLNLIDLLGRSGQLQLSEDLINSM---PYEPDSSAWLALLGACRMHGDVDRGARI 419

Query: 391 HDYIKENDMQSS-LYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
            + I E D + S  Y+   L ++Y+  G M +A      M ++ I 
Sbjct: 420 AELIYELDPEDSGPYI--LLSNLYSSTGRMDEARRTRKAMRLRGIT 463


>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Brachypodium distachyon]
          Length = 742

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 254/781 (32%), Positives = 390/781 (49%), Gaps = 108/781 (13%)

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD------LKEGRRVFNKIDNGKV 163
           +S+    ++H+++  SG ++      S L+   V C        L+    +F+++     
Sbjct: 10  RSVRQAAELHAVLVASGRLLHPPS-ASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTF 68

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL 223
                L   +  +   +  L L+++M+  G+  D++TF  + KC A          AH L
Sbjct: 69  LFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCAR-------GRAHVL 121

Query: 224 FDEL-----------SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
             ++           S   +VS N +I  Y+  G+A      F ++       D     T
Sbjct: 122 LCQMLHAACFRTMLPSAVPLVS-NPIIHMYVELGLAGDARRAFDDIPV----KDAVAWTT 176

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           V+SG A                                   K G LD A  +      R+
Sbjct: 177 VISGLA-----------------------------------KLGLLDDAWCLLRHSPARN 201

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
           V+SWT +I+GY+R G    A+  F  M+ +GIEPD   +  +L ACA    L  G+ +H 
Sbjct: 202 VISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHK 261

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN------------------------- 427
            + E  M  S  +  AL+DMYAKCG +  A  VF+                         
Sbjct: 262 LVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVD 321

Query: 428 -------QMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACA 469
                  QM  +D+V++N++I           AL LF+ M + +   D  TM  +L ACA
Sbjct: 322 VARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACA 381

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           SL AL +GR +H  I +  +  D  +  A++DMY+KCG +  A  +F  +  +D+ +W+ 
Sbjct: 382 SLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSA 441

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           MIAG   +G G  A+  F  M+  G +P+ V++I++L ACSHS L+DEG  +F  MR   
Sbjct: 442 MIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLH 501

Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
           NI P +EHY CM+DLL R+G L EA   +  MP+ P+A IW S+L  CR+H +  LA   
Sbjct: 502 NIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNA 561

Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
           AEH+ +LEPD    YV L N+Y ++ +WE+  ++R  +  RG+KK  G S I + G+V+ 
Sbjct: 562 AEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHK 621

Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
           F+    +HP   +I ++++ +   +K  GY P T    ++ DE EKE AL  HSEK+A+A
Sbjct: 622 FIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEHALLAHSEKIAIA 681

Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
           FG+++L     + + KNLRVC DCH   K +S+   REI++RD +RFHHF+DG CSC  F
Sbjct: 682 FGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDF 741

Query: 830 W 830
           W
Sbjct: 742 W 742



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 185/384 (48%), Gaps = 44/384 (11%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++   I  +   G   +A++   S  S+  + D  T   +L  CA LK L  G+ +H ++
Sbjct: 204 SWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLV 263

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG-KVFIWNLLMHEYSKTGNFKE 181
            E G+++  G L   L+ M+  CGD+     VF+ +  G +   WN ++  Y K G+   
Sbjct: 264 GEKGMLM-SGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDV 322

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
           + YL                                      FD++ DRD+V++N +I+G
Sbjct: 323 ARYL--------------------------------------FDQMEDRDLVTFNSLITG 344

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
           YI  G   + L +F +M       D  TMV++L+ CA+ GAL  GRA+HA   +     +
Sbjct: 345 YIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVD 404

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           I     LLDMY KCG ++ A  VF+ M  R V +W++MIAG A  G+   A+  F  M  
Sbjct: 405 IYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKV 464

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMA 420
           +G +P+     +IL AC+   LL+ G+   + ++  ++++  +     ++D+  + G + 
Sbjct: 465 DGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLD 524

Query: 421 DAESVFNQMPVK-DIVSWNTMIGA 443
           +A  +   MP++ + V W +++ A
Sbjct: 525 EAMDLVRTMPMQPNAVIWASILSA 548


>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/629 (37%), Positives = 355/629 (56%), Gaps = 22/629 (3%)

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
           S R+ DA  LFDE+  RDVVSWN MISG +  G  +  +++F EM        + +   +
Sbjct: 79  SNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERS----VVSWTAM 134

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           ++GC   G  M  +A   F       K+I+  N ++  Y + G +D A+++F++M  ++V
Sbjct: 135 VNGCFRFG--MVDQAERLFCQMPV--KDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNV 190

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           +SWT+MI G  +      A+ LF+ M+R  I+      T ++ ACA      +G  VH +
Sbjct: 191 ISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGF 250

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           I ++      YV+ +L+ +YA C    D+  VF +M  + +  W  ++           A
Sbjct: 251 IIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDA 310

Query: 444 LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           L++F  M++N   P+  T A  L +C++L  L+ G+EIHG  ++ G+     V N++V M
Sbjct: 311 LNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVM 370

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y   G +  A S+F  I  K ++SW  +I G   HG G  A   F  M +   EPDE++F
Sbjct: 371 YSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITF 430

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECN-IEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
             +L ACSH G + +G + F  +    N I+ K++HY CMVD+L R G L EA + IE M
Sbjct: 431 TGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESM 490

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
            V P+  +W +LL  CR+H +V   EK A  +F L+  ++  YVLL+N+YA A +W  V 
Sbjct: 491 VVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSSVS 550

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           KLR K+ ++G+ K PG SW+ I+GK + F +G    PH  +I   L+ LR ++K  GY P
Sbjct: 551 KLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSG--DRPHCLRIFEKLEFLREKLKELGYVP 608

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
             R AL + ++ +KE  L  HSE+LA+AFG++N   G T+ V KNLRVC DCH + K +S
Sbjct: 609 DYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCEDCHTVIKLIS 668

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           +    +IVLRD  RFHHFK+G CSC  +W
Sbjct: 669 RVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 207/409 (50%), Gaps = 21/409 (5%)

Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
           V CGD+    ++F+++    V  W  +++   + G   ++  LF +M    IAA    ++
Sbjct: 108 VECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAA----WN 163

Query: 203 CVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
            ++      G   +V DA KLF ++  ++V+SW  MI G   N  + + L +FK ML   
Sbjct: 164 AMVHGYLQFG---KVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCC 220

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
                 T   V++ CAN  A   G  VH F +K+ F  E     +L+ +Y+ C   + + 
Sbjct: 221 IKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSR 280

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
           +VF +M    V  WT++++GY+     + A+ +F  M+R  I P+     S L++C+  G
Sbjct: 281 KVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALG 340

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI- 441
            L+ GK++H    +  + +  +V N+L+ MY+  G++ DA SVF ++  K IVSWN++I 
Sbjct: 341 TLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIV 400

Query: 442 ---------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                     A  +F  M++ N EPD +T   +L AC+    L++GR++  YI       
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHI 460

Query: 492 DRNVAN--AIVDMYVKCGVLVLARSLFD-MIPAKDLISWTIMIAGYGMH 537
           DR + +   +VD+  +CG L  A  L + M+   + + W  +++   MH
Sbjct: 461 DRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSACRMH 509



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 191/388 (49%), Gaps = 33/388 (8%)

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
           S  +S    ++  Y++   L  A+ +F++M  R VVSW SMI+G    G  D A+++F  
Sbjct: 63  SPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDE 122

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M     E  V + T++++ C   G+++  + +   +   D+ +     NA++  Y + G 
Sbjct: 123 MP----ERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAA----WNAMVHGYLQFGK 174

Query: 419 MADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPA 467
           + DA  +F QMP K+++SW TMI           AL+LF  ML+   +    T  C++ A
Sbjct: 175 VDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITA 234

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           CA+  A   G ++HG+I++ G   +  V  +++ +Y  C     +R +F  +  + +  W
Sbjct: 235 CANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVW 294

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
           T +++GY ++    DA+  F++M +  I P++ +F S L +CS  G +D G     +   
Sbjct: 295 TALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVA-- 352

Query: 588 ECNIEPKLEHYA----CMVDLLSRTGNLSEAYR-FIEMMPVAPDATIWGSLLCGCRIHHE 642
              ++  L   A     +V + S +GN+++A   FIE+         W S++ GC  H  
Sbjct: 353 ---VKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFK--KSIVSWNSIIVGCAQHGR 407

Query: 643 VKLAEKVAEHVFEL--EPDNTGYYVLLA 668
            K A  +   +  L  EPD   +  LL+
Sbjct: 408 GKWAFVIFGQMIRLNKEPDEITFTGLLS 435



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 35/270 (12%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K  ++T+  ++  CA+  +   G +VH  I +SG + ++ V  S L+ ++  C   ++ R
Sbjct: 222 KSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTAS-LITLYANCKRTEDSR 280

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-----SCV--- 204
           +VF ++ + KV +W  L+  YS     +++L +F +M    I  +  TF     SC    
Sbjct: 281 KVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALG 340

Query: 205 ----------------LKCLAVVGNSR--------RVKDAHKLFDELSDRDVVSWNCMIS 240
                           L  +A VGNS          V DA  +F E+  + +VSWN +I 
Sbjct: 341 TLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIV 400

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC--F 298
           G   +G  +    +F +M+ L    D  T   +LS C++CG L  GR +  +        
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHI 460

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            ++I     ++D+  +CG+L  A ++ E M
Sbjct: 461 DRKIQHYTCMVDILGRCGELKEAEKLIESM 490


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/626 (35%), Positives = 358/626 (57%), Gaps = 13/626 (2%)

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT-VLSG 276
           K A KLFD +  R+VVSW+ ++ GY+  G   + L +F+ +++L        + T VLS 
Sbjct: 78  KCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSC 137

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           CA+ G +  G+  H + LK+         N L+ MYS+C  +D A+++ + +    V S+
Sbjct: 138 CADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSY 197

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            S+++     G    A ++ + MV E +  D     S+L  CA    L++G  +H  + +
Sbjct: 198 NSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLK 257

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDL 446
             +   ++VS+ L+D Y KCG + +A   F+ +  +++V+W  ++ A          L+L
Sbjct: 258 TGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNL 317

Query: 447 FVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M L++  P+  T A +L ACASL AL  G  +HG I+  G      V NA+++MY K
Sbjct: 318 FTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSK 377

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
            G +  + ++F  +  +D+I+W  MI GY  HG G  A+  F DM  AG  P+ V+FI V
Sbjct: 378 SGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGV 437

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP-VA 624
           L AC H  LV EG+ +F+ +  + ++EP LEHY CMV LL R G L EA  F++    V 
Sbjct: 438 LSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVK 497

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
            D   W +LL  C IH    L +++ E V +++P + G Y LL+N++A+A KW+ V K+R
Sbjct: 498 WDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIR 557

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
           + +  R +KK PG SW++I+   ++FV+ GS+HP + +I   +++L   +K  GY P   
Sbjct: 558 KLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDVG 617

Query: 745 YALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTA 804
             L + ++ +KE  L  HSEKLA+A+G++ +P    IR+ KNLR+C DCH   K +SK  
Sbjct: 618 VVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKAT 677

Query: 805 RREIVLRDSNRFHHFKDGRCSCRGFW 830
            R I++RD+NRFHHF++G C+C   W
Sbjct: 678 NRLIIVRDANRFHHFREGLCTCNDHW 703



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 203/427 (47%), Gaps = 46/427 (10%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLG--SKLVFMFVTCGDLKEGRRV 154
           K   ++L+  A  KSL  GK +H+ +        D  +   + L+ ++  CG  K  R++
Sbjct: 24  KEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKL 83

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA-ADSYTFSCVLKCLAVVGN 213
           F+++    V  W+ LM  Y   G   E L LF+ + SL  A  + Y F+ VL C A  G 
Sbjct: 84  FDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGR 143

Query: 214 SRRVKDAH--------------------------------KLFDELSDRDVVSWNCMISG 241
            +  K  H                                ++ D +   DV S+N ++S 
Sbjct: 144 VKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSA 203

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
            + +G   +  +V K M++     D  T V+VL  CA    L  G  +HA  LK     +
Sbjct: 204 LVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFD 263

Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
           +  ++TL+D Y KCG++  A + F+ + +R+VV+WT+++  Y + G F+  + LF  M  
Sbjct: 264 VFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMEL 323

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
           E   P+ +    +L+ACA    L  G  +H  I  +  ++ L V NAL++MY+K G++  
Sbjct: 324 EDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDS 383

Query: 422 AESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQNFE-PDGVTMACILPACAS 470
           + +VF+ M  +D+++WN MI           AL +F  M+   E P+ VT   +L AC  
Sbjct: 384 SYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVH 443

Query: 471 LAALERG 477
           LA ++ G
Sbjct: 444 LALVQEG 450



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 202/400 (50%), Gaps = 39/400 (9%)

Query: 267 LATMVTVLSGCANCGALMFGRAVHA-FALKACFSKE--ISFNNTLLDMYSKCGDLDGAIR 323
           L  +V +L   A   +L FG+ +HA   ++   SK+  I+  N+L+++YSKCG    A +
Sbjct: 23  LKEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARK 82

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSILHACACDG 382
           +F++M +R+VVSW++++ GY  +G     + LFR +V  +   P+ Y  T +L  CA  G
Sbjct: 83  LFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSG 142

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
            ++ GK  H Y+ ++ +    YV NAL+ MY++C  +  A  + + +P  D+ S+N+++ 
Sbjct: 143 RVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILS 202

Query: 443 AL----------DLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
           AL           +   M+      D VT   +L  CA +  L+ G +IH  +L+ G+  
Sbjct: 203 ALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVF 262

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D  V++ ++D Y KCG ++ AR  FD +  +++++WT ++  Y  +G   + +  F  M 
Sbjct: 263 DVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKME 322

Query: 552 QAGIEPDEVSFISVLYACS-----------HSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
                P+E +F  +L AC+           H  +V  G++              L     
Sbjct: 323 LEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFK------------NHLIVGNA 370

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           ++++ S++GN+  +Y     M +  D   W +++CG   H
Sbjct: 371 LINMYSKSGNIDSSYNVFSNM-MNRDVITWNAMICGYSHH 409



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 167/368 (45%), Gaps = 67/368 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +YN+ +    E G   +A +VL     E    D+ TY S+L LCA ++ L+ G ++H+ +
Sbjct: 196 SYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQL 255

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G+V D  V  S L+  +  CG++   R+ F+ + +  V  W  ++  Y + G+F+E+
Sbjct: 256 LKTGLVFDVFV-SSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEET 314

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA------------------------VVGN----- 213
           L LF KM+      + +TF+ +L   A                        +VGN     
Sbjct: 315 LNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINM 374

Query: 214 ---SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
              S  +  ++ +F  + +RDV++WN MI GY  +G+ ++ L VF++M++ G   +  T 
Sbjct: 375 YSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTF 434

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           + VLS C           VH   ++  F                    D  ++ F+   E
Sbjct: 435 IGVLSAC-----------VHLALVQEGFYY-----------------FDQIMKKFDV--E 464

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
             +  +T M+A   R G+ D A    +   +  ++ DV A  ++L+AC       +GK +
Sbjct: 465 PGLEHYTCMVALLGRAGLLDEAENFMKTTTQ--VKWDVVAWRTLLNACHIHRNYNLGKQI 522

Query: 391 HDYIKEND 398
            + + + D
Sbjct: 523 TETVIQMD 530


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/693 (33%), Positives = 366/693 (52%), Gaps = 45/693 (6%)

Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
            S+++ C  L  +E G ++H  +  SG    D  +G+ L+  +   GB++  R VF+++ 
Sbjct: 41  ASVIRACTQLGVVEKGAQLHGFVVRSGF-DQDVYVGTSLIDFYSKNGBIEVARLVFDQLL 99

Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------------ 207
                 W  ++  Y+K G    SL LF +M+   +  D Y  S VL              
Sbjct: 100 EKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQ 159

Query: 208 -------------LAVVG-------NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
                        ++VV           RVK   KLFD++  ++++SW  MISGY+ N  
Sbjct: 160 IHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSF 219

Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
             + +++F EM  LG+  D     +VL+ C +  AL  GR VHA+ +KA         N 
Sbjct: 220 DWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNG 279

Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
           L+DMY+K   L  A +VF+ M E++V+S+ +MI GY+ +     A+ LF  M      P 
Sbjct: 280 LIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPS 339

Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
           +    S+L   A    LE+ K +H  I +  +   L+  +AL+D+Y+KC  + DA  VF 
Sbjct: 340 LLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFE 399

Query: 428 QMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAALER 476
           +M  KDIV WN M            AL L+  +     +P+  T A ++ A ++LA+L  
Sbjct: 400 EMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRH 459

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
           G++ H  +++ G+     V NA+VDMY KCG +  AR +F+    +D++ W  MI+ +  
Sbjct: 460 GQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQ 519

Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
           HG   +A+  F +M + GI+P+ V+F++VL ACSH+G V++G   FN M     I+P  E
Sbjct: 520 HGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMP-GFGIKPGTE 578

Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL 656
           HYAC+V LL R+G L EA  FIE MP+ P A +W SLL  CRI   V+L +  AE     
Sbjct: 579 HYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAIST 638

Query: 657 EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSS 716
           +P ++G Y+LL+N++A    W +VKK+R+++    + K PG SWIE+  KVN+F+A  ++
Sbjct: 639 DPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTT 698

Query: 717 HPHAKKIESLLKRLRLEMKREGYFPKTRYALIN 749
           H  A  I S+L  L   +K  GY P     L+N
Sbjct: 699 HREADMIGSVLDILIQHIKGAGYVPDATALLMN 731



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 221/416 (53%), Gaps = 14/416 (3%)

Query: 246 GVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
           G +E+ L VF ++    G + +   + +V+  C   G +  G  +H F +++ F +++  
Sbjct: 15  GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
             +L+D YSK GB++ A  VF+++ E++ V+WT++IAGY + G    ++ LF  M    +
Sbjct: 75  GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
            PD Y ++S+L AC+    LE GK +H Y+     +  + V N L+D Y KC  +     
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRK 194

Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAA 473
           +F+QM VK+I+SW TMI           A+ LF  M +  ++PDG     +L +C SL A
Sbjct: 195 LFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEA 254

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           LE+GR++H Y ++  + ++  V N ++DMY K  +L  A+ +FD++  +++IS+  MI G
Sbjct: 255 LEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEG 314

Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
           Y       +A+  F++MR     P  ++F+S+L   S S    E  +  + +  +  +  
Sbjct: 315 YSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL-GVSASLFALELSKQIHGLIIKXGVSL 373

Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
            L   + ++D+ S+   + +A    E M    D  +W ++  G   H E + A K+
Sbjct: 374 DLFAGSALIDVYSKCSYVKDARHVFEEMN-EKDIVVWNAMFFGYTQHLENEEALKL 428



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 234/496 (47%), Gaps = 46/496 (9%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I  + + G    ++E+     ++ +  D     S+L  C+ L+ LE GK++H+ +   G 
Sbjct: 110 IAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGT 169

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
            +D  V+ + L+  +  C  +K GR++F+++    +  W  ++  Y +     E++ LF 
Sbjct: 170 EMDVSVV-NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFG 228

Query: 188 KMQSLGIAADSYTFSCVLK---CLAVVGNSRRVK-------------------------- 218
           +M  LG   D +  + VL     L  +   R+V                           
Sbjct: 229 EMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSN 288

Query: 219 ---DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
              DA K+FD +++++V+S+N MI GY +     + LE+F EM    F   L T V++L 
Sbjct: 289 LLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLG 348

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
             A+  AL   + +H   +K   S ++   + L+D+YSKC  +  A  VFE+M E+ +V 
Sbjct: 349 VSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVV 408

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W +M  GY +    + A++L+  +     +P+ +   +++ A +    L  G+  H+ + 
Sbjct: 409 WNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLV 468

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
           +  +    +V+NAL+DMYAKCGS+ +A  +FN    +D+V WN+MI           AL 
Sbjct: 469 KMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALG 528

Query: 446 LFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
           +F  M+ +  +P+ VT   +L AC+    +E G      +   GI         +V +  
Sbjct: 529 MFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEHYACVVSLLG 588

Query: 505 KCGVLVLARSLFDMIP 520
           + G L  A+   + +P
Sbjct: 589 RSGKLFEAKEFIEKMP 604


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/674 (35%), Positives = 358/674 (53%), Gaps = 32/674 (4%)

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD---------------AHKLFDELS 228
           YLFK   +LG  +D   F   L+ +A   NS +  D               A + FD++ 
Sbjct: 85  YLFKMCGTLGALSDGKLFHNRLQRMA---NSNKFIDNCILQMYCDCKSFTAAERFFDKIV 141

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
           DRD+ SW  +IS Y   G  ++ + +F  ML+LG   + +   T++   A+   L  G+ 
Sbjct: 142 DRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQ 201

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +H+  ++  F+ +IS    + +MY KCG LDGA     KM  +S V+ T ++ GY +   
Sbjct: 202 IHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAAR 261

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
              A+ LF  M+ EG+E D +  + IL ACA  G L  GK +H Y  +  ++S + V   
Sbjct: 262 NRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTP 321

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNFEPDGVTMA 462
           L+D Y KC     A   F  +   +  SW+ +I      G  D  + + +     GV + 
Sbjct: 322 LVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLN 381

Query: 463 C-----ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
                 I  AC++++ L  G +IH   ++ G+ A  +  +A++ MY KCG +  A   F 
Sbjct: 382 SFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFL 441

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
            I   D ++WT +I  +  HG   +A+  F +M+ +G+ P+ V+FI +L ACSHSGLV E
Sbjct: 442 AIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKE 501

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           G +F + M  +  + P ++HY CM+D+ SR G L EA   I  MP  PD   W SLL GC
Sbjct: 502 GKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGC 561

Query: 638 RIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPG 697
                +++    A+++F L+P ++  YV++ N+YA A KW+E  + R+ ++ R L+K   
Sbjct: 562 WSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVS 621

Query: 698 CSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKR-EGYFPKTRYALINADEMEKE 756
           CSWI +KGKV+ FV G   HP  ++I S LK L +  K+ E        AL   D  E++
Sbjct: 622 CSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKKGEERLLNEENAL--CDFTERK 679

Query: 757 VALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRF 816
             L  HSE+LA+A+G++   A   I V KN R C DCHE AK +S    RE+V+RD NRF
Sbjct: 680 DQLLDHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHEFAKRVSVVTGRELVVRDGNRF 739

Query: 817 HHFKDGRCSCRGFW 830
           HH   G CSCR +W
Sbjct: 740 HHINSGECSCRDYW 753



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/568 (23%), Positives = 251/568 (44%), Gaps = 62/568 (10%)

Query: 68  AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII---CE 124
           A+ G+  +V    + M++   S    I+ ++Y  + ++C  L +L DGK  H+ +     
Sbjct: 56  AKQGKLRQVHEFIRNMDIAGIS----INPRSYEYLFKMCGTLGALSDGKLFHNRLQRMAN 111

Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
           S   ID+ +L      M+  C       R F+KI +  +  W  ++  Y++ G   E++ 
Sbjct: 112 SNKFIDNCILQ-----MYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVG 166

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLF-------------------- 224
           LF +M  LGI  +   FS ++   A        K  H                       
Sbjct: 167 LFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYV 226

Query: 225 ------------DELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
                       ++++ +  V+   ++ GY         L +F +M++ G  +D      
Sbjct: 227 KCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSI 286

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
           +L  CA  G L  G+ +H++ +K     E+S    L+D Y KC   + A + FE + E +
Sbjct: 287 ILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPN 346

Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD 392
             SW+++IAGY + G FD A+ +F+ +  +G+  + +   +I  AC+    L  G  +H 
Sbjct: 347 DFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHA 406

Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------G 442
              +  + + L   +A++ MY+KCG +  A   F  +   D V+W  +I           
Sbjct: 407 DAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASE 466

Query: 443 ALDLFVAML-QNFEPDGVTMACILPACASLAALERGRE-IHGYILRHGISADRNVANAIV 500
           AL LF  M      P+ VT   +L AC+    ++ G++ +     ++G++   +  N ++
Sbjct: 467 ALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMI 526

Query: 501 DMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG-YGMHGFGCDAIATFNDMRQAGIEP- 557
           D+Y + G+L+ A  +   +P + D++SW  ++ G +         IA  N  R   ++P 
Sbjct: 527 DIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFR---LDPL 583

Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMM 585
           D  +++ +    + +G  DE  +F  MM
Sbjct: 584 DSATYVIMFNLYALAGKWDEAAQFRKMM 611



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 25/281 (8%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSK---IDTKTYCSILQLCADLKSLEDGKKVHSI 121
           +++A I  +C+ G  ++A+EV + + +SK   +++  Y +I Q C+ +  L  G ++H+ 
Sbjct: 349 SWSALIAGYCQSGKFDRALEV-FKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHAD 407

Query: 122 ICESGIVIDDGVLG--SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
             + G+V     L   S ++ M+  CG +    + F  ID      W  ++  ++  G  
Sbjct: 408 AIKKGLV---AYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKA 464

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS----- 234
            E+L LFK+MQ  G+  +  TF   +  L    +S  VK+  +  D ++D+  V+     
Sbjct: 465 SEALRLFKEMQGSGVRPNVVTF---IGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDH 521

Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG--RAVHAF 292
           +NCMI  Y   G+  + LEV + M    F  D+ +  ++L GC +   L  G   A + F
Sbjct: 522 YNCMIDIYSRAGLLLEALEVIRSM---PFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIF 578

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
            L    S        + ++Y+  G  D A +  + M ER++
Sbjct: 579 RLDPLDSATYVI---MFNLYALAGKWDEAAQFRKMMAERNL 616


>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
 gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
 gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
 gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/606 (36%), Positives = 340/606 (56%), Gaps = 43/606 (7%)

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           +T   ++  C+   AL  G+ VH     + F   I   N LL MY+KCG L  A +VF++
Sbjct: 86  STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE------------------------- 362
           M  R + SW  M+ GYA  G+ + A +LF  M  +                         
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205

Query: 363 -------GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
                     P+++ ++  + A A    +  GK++H +I    + S   + ++LMDMY K
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACI 464
           CG + +A ++F+++  KD+VSW +MI              LF  ++ + E P+  T A +
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           L ACA L   E G+++HGY+ R G       ++++VDMY KCG +  A+ + D  P  DL
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           +SWT +I G   +G   +A+  F+ + ++G +PD V+F++VL AC+H+GLV++G  FF  
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 445

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVK 644
           +  +  +    +HY C+VDLL+R+G   +    I  MP+ P   +W S+L GC  +  + 
Sbjct: 446 ITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNID 505

Query: 645 LAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIK 704
           LAE+ A+ +F++EP+N   YV +AN+YA A KWEE  K+R+++   G+ K PG SW EIK
Sbjct: 506 LAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIK 565

Query: 705 GKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSE 764
            K ++F+A  +SHP   +I   L+ LR +MK EGY P T   L + ++ +KE  L  HSE
Sbjct: 566 RKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSE 625

Query: 765 KLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRC 824
           KLA+AF IL+   G  I+V KNLR C DCH   KF+S   +R+I +RDS RFH F++G+C
Sbjct: 626 KLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQC 685

Query: 825 SCRGFW 830
           SC  +W
Sbjct: 686 SCGDYW 691



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 237/498 (47%), Gaps = 65/498 (13%)

Query: 60  VCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVH 119
           +C+   +   I   C    L +A+++L  ++K      TYC+++Q+C+  ++LE+GKKVH
Sbjct: 51  LCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPP--ASTYCNLIQVCSQTRALEEGKKVH 108

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
             I  SG V    V+ ++L+ M+  CG L + R+VF+++ N  +  WN++++ Y++ G  
Sbjct: 109 EHIRTSGFV-PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLL 167

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMI 239
           +E+  LF                                      DE++++D  SW  M+
Sbjct: 168 EEARKLF--------------------------------------DEMTEKDSYSWTAMV 189

Query: 240 SGYIANGVAEKGLEVFKEMLNLG------FNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           +GY+     E+ L ++  M  +       F V +A        C     +  G+ +H   
Sbjct: 190 TGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC-----IRRGKEIHGHI 244

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           ++A    +    ++L+DMY KCG +D A  +F+K+ E+ VVSWTSMI  Y +   +    
Sbjct: 245 VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGF 304

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
            LF  +V     P+ Y    +L+ACA     E+GK VH Y+         + S++L+DMY
Sbjct: 305 SLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMY 364

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMA 462
            KCG++  A+ V +  P  D+VSW ++IG          AL  F  +L++  +PD VT  
Sbjct: 365 TKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFV 424

Query: 463 CILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
            +L AC     +E+G E    I  +H +S   +    +VD+  + G     +S+   +P 
Sbjct: 425 NVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPM 484

Query: 522 K-DLISWTIMIAGYGMHG 538
           K     W  ++ G   +G
Sbjct: 485 KPSKFLWASVLGGCSTYG 502



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 126/305 (41%), Gaps = 36/305 (11%)

Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLL 169
           K +  GK++H  I  +G+  D+ VL S L+ M+  CG + E R +F+KI    V  W  +
Sbjct: 232 KCIRRGKEIHGHIVRAGLDSDE-VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSM 290

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----------VVGNSRRV-- 217
           +  Y K+  ++E   LF ++       + YTF+ VL   A          V G   RV  
Sbjct: 291 IDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGF 350

Query: 218 --------------------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
                               + A  + D     D+VSW  +I G   NG  ++ L+ F  
Sbjct: 351 DPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDL 410

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCG 316
           +L  G   D  T V VLS C + G +  G    ++   K   S        L+D+ ++ G
Sbjct: 411 LLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSG 470

Query: 317 DLDGAIRVFEKMGER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVR-EGIEPDVYAITSI 374
             +    V  +M  + S   W S++ G +  G  D A    + + + E   P  Y   + 
Sbjct: 471 RFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMAN 530

Query: 375 LHACA 379
           ++A A
Sbjct: 531 IYAAA 535



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 24/235 (10%)

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
           +P   T   ++  C+   ALE G+++H +I   G      + N ++ MY KCG LV AR 
Sbjct: 82  KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +FD +P +DL SW +M+ GY   G   +A   F++M     E D  S+ +++        
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKDSYSWTAMVTGYVKKDQ 197

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLS-----RTGNLSEAYRFIEMMPVAPDATI 629
            +E    +++M+   N  P +   +  V   +     R G   E +  I    +  D  +
Sbjct: 198 PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK--EIHGHIVRAGLDSDEVL 255

Query: 630 WGSLL-----CGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
           W SL+     CGC I     + +K+ E        +   +  + + Y ++ +W E
Sbjct: 256 WSSLMDMYGKCGC-IDEARNIFDKIVE-------KDVVSWTSMIDRYFKSSRWRE 302


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/620 (36%), Positives = 348/620 (56%), Gaps = 25/620 (4%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           R+VVSW  +ISG   NG     L  F EM   G   +  T        A+    + G+ +
Sbjct: 71  RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           HA A+K     ++    +  DMY K    D A ++F+++ ER++ +W + I+    +G  
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             AI  F    R    P+     + L+AC+    L +G  +H  +  +   + + V N L
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVT--------- 460
           +D Y KC  +  +E +F +M  K+ VSW +++ A       +QN E +  +         
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAY------VQNHEDEKASVLYLRSRKD 304

Query: 461 --------MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
                   ++ +L ACA +A LE GR IH + ++  +     V +A+VDMY KCG +  +
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM--RQAGIEPDEVSFISVLYACS 570
              FD +P K+L++   +I GY   G    A+A F +M  R  G  P+ ++F+S+L ACS
Sbjct: 365 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
            +G V+ G + F+ MR    IEP  EHY+C+VD+L R G +  AY FI+ MP+ P  ++W
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
           G+L   CR+H + +L    AE++F+L+P ++G +VLL+N +A A +W E   +RE++   
Sbjct: 485 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           G+KK  G SWI +K +V+ F A   SH   K+I++ L +LR EM+  GY P  + +L + 
Sbjct: 545 GIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 604

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           +E EK   +  HSEKLA+AFG+L+LP    IR+TKNLR+CGDCH   KF+S + +REI++
Sbjct: 605 EEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIV 664

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RD+NRFH FKDG CSC+ +W
Sbjct: 665 RDNNRFHRFKDGICSCKDYW 684



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 225/475 (47%), Gaps = 47/475 (9%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
           S+  G+ VH+ I ++        L + L+ M+      +  R V        V  W  L+
Sbjct: 21  SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80

Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-----VVGN------------ 213
              ++ G+F  +L  F +M+  G+  + +TF C  K +A     V G             
Sbjct: 81  SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140

Query: 214 ---------------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
                          +R   DA KLFDE+ +R++ +WN  IS  + +G   + +E F E 
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 200

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
             +  + +  T    L+ C++   L  G  +H   L++ F  ++S  N L+D Y KC  +
Sbjct: 201 RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260

Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
             +  +F +MG ++ VSW S++A Y +    + A  L+    ++ +E   + I+S+L AC
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320

Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
           A    LE+G+ +H +  +  ++ +++V +AL+DMY KCG + D+E  F++MP K++V+ N
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 380

Query: 439 TMIGA------LDLFVAMLQNFEPDG-------VTMACILPACASLAALERGREIHGYIL 485
           ++IG       +D+ +A+ +   P G       +T   +L AC+   A+E G +I   + 
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440

Query: 486 R-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
             +GI       + IVDM  + G++  A      +P +  IS W  +     MHG
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 184/402 (45%), Gaps = 17/402 (4%)

Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGER 331
           +L    +  ++  GR VHA  +K   S    F  N L++MYSK    + A  V      R
Sbjct: 12  LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           +VVSWTS+I+G A+ G F  A+  F  M REG+ P+ +       A A   L   GK +H
Sbjct: 72  NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
               +      ++V  +  DMY K     DA  +F+++P +++ +WN  I          
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191

Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            A++ F+   + +  P+ +T    L AC+    L  G ++HG +LR G   D +V N ++
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           D Y KC  +  +  +F  +  K+ +SW  ++A Y  +     A   +   R+  +E  + 
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF 311

Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
              SVL AC+    ++ G R  +    +  +E  +   + +VD+  + G + ++ +  + 
Sbjct: 312 MISSVLSACAGMAGLELG-RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370

Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTG 662
           MP   +     SL+ G     +V +A  + E   E+ P   G
Sbjct: 371 MP-EKNLVTRNSLIGGYAHQGQVDMALALFE---EMAPRGCG 408



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/317 (20%), Positives = 132/317 (41%), Gaps = 45/317 (14%)

Query: 64  KNYNAEIGRFCEVGNLEKAMEVLYSSEKSKID----TKTYCSILQLCADLKSLEDGKKVH 119
           + +NA I      G   +A+E     E  +ID    + T+C+ L  C+D   L  G ++H
Sbjct: 175 ETWNAFISNSVTDGRPREAIEAFI--EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLH 232

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
            ++  SG   D  V    L+  +  C  ++    +F ++       W  L+  Y +    
Sbjct: 233 GLVLRSGFDTDVSVCNG-LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHED 291

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------------ 209
           +++  L+ + +   +    +  S VL   A                              
Sbjct: 292 EKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSAL 351

Query: 210 --VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNV 265
             + G    ++D+ + FDE+ ++++V+ N +I GY   G  +  L +F+EM     G   
Sbjct: 352 VDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTP 411

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN--TLLDMYSKCGDLDGAIR 323
           +  T V++LS C+  GA+  G  +   ++++ +  E    +   ++DM  + G ++ A  
Sbjct: 412 NYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYE 470

Query: 324 VFEKMGERSVVS-WTSM 339
             +KM  +  +S W ++
Sbjct: 471 FIKKMPIQPTISVWGAL 487


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/620 (36%), Positives = 348/620 (56%), Gaps = 25/620 (4%)

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           R+VVSW  +ISG   NG     L  F EM   G   +  T        A+    + G+ +
Sbjct: 21  RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 80

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           HA A+K     ++    +  DMY K    D A ++F+++ ER++ +W + I+    +G  
Sbjct: 81  HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 140

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
             AI  F    R    P+     + L+AC+    L +G  +H  +  +   + + V N L
Sbjct: 141 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 200

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVT--------- 460
           +D Y KC  +  +E +F +M  K+ VSW +++ A       +QN E +  +         
Sbjct: 201 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAY------VQNHEDEKASVLYLRSRKD 254

Query: 461 --------MACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
                   ++ +L ACA +A LE GR IH + ++  +     V +A+VDMY KCG +  +
Sbjct: 255 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 314

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM--RQAGIEPDEVSFISVLYACS 570
              FD +P K+L++   +I GY   G    A+A F +M  R  G  P+ ++F+S+L ACS
Sbjct: 315 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 374

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
            +G V+ G + F+ MR    IEP  EHY+C+VD+L R G +  AY FI+ MP+ P  ++W
Sbjct: 375 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 434

Query: 631 GSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRR 690
           G+L   CR+H + +L    AE++F+L+P ++G +VLL+N +A A +W E   +RE++   
Sbjct: 435 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 494

Query: 691 GLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINA 750
           G+KK  G SWI +K +V+ F A   SH   K+I++ L +LR EM+  GY P  + +L + 
Sbjct: 495 GIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 554

Query: 751 DEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVL 810
           +E EK   +  HSEKLA+AFG+L+LP    IR+TKNLR+CGDCH   KF+S + +REI++
Sbjct: 555 EEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIV 614

Query: 811 RDSNRFHHFKDGRCSCRGFW 830
           RD+NRFH FKDG CSC+ +W
Sbjct: 615 RDNNRFHRFKDGICSCKDYW 634



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 213/440 (48%), Gaps = 48/440 (10%)

Query: 147 DLKEGRRVFNKIDNGK-VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           D  E  R+  ++   + V  W  L+   ++ G+F  +L  F +M+  G+  + +TF C  
Sbjct: 6   DHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAF 65

Query: 206 KCLA-----VVGN---------------------------SRRVKDAHKLFDELSDRDVV 233
           K +A     V G                            +R   DA KLFDE+ +R++ 
Sbjct: 66  KAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLE 125

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
           +WN  IS  + +G   + +E F E   +  + +  T    L+ C++   L  G  +H   
Sbjct: 126 TWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLV 185

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           L++ F  ++S  N L+D Y KC  +  +  +F +MG ++ VSW S++A Y +    + A 
Sbjct: 186 LRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKAS 245

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
            L+    ++ +E   + I+S+L ACA    LE+G+ +H +  +  ++ +++V +AL+DMY
Sbjct: 246 VLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMY 305

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGA------LDLFVAMLQNFEPDG-------VT 460
            KCG + D+E  F++MP K++V+ N++IG       +D+ +A+ +   P G       +T
Sbjct: 306 GKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMT 365

Query: 461 MACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
              +L AC+   A+E G +I   +   +GI       + IVDM  + G++  A      +
Sbjct: 366 FVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM 425

Query: 520 PAKDLIS-WTIMIAGYGMHG 538
           P +  IS W  +     MHG
Sbjct: 426 PIQPTISVWGALQNACRMHG 445



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 166/363 (45%), Gaps = 16/363 (4%)

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
           MYSK    + A  V      R+VVSWTS+I+G A+ G F  A+  F  M REG+ P+ + 
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
                 A A   L   GK +H    +      ++V  +  DMY K     DA  +F+++P
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 431 VKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGRE 479
            +++ +WN  I           A++ F+   + +  P+ +T    L AC+    L  G +
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +HG +LR G   D +V N ++D Y KC  +  +  +F  +  K+ +SW  ++A Y  +  
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
              A   +   R+  +E  +    SVL AC+    ++ G R  +    +  +E  +   +
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELG-RSIHAHAVKACVERTIFVGS 299

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
            +VD+  + G + ++ +  + MP   +     SL+ G     +V +A  + E   E+ P 
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFE---EMAPR 355

Query: 660 NTG 662
             G
Sbjct: 356 GCG 358



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/317 (20%), Positives = 132/317 (41%), Gaps = 45/317 (14%)

Query: 64  KNYNAEIGRFCEVGNLEKAMEVLYSSEKSKID----TKTYCSILQLCADLKSLEDGKKVH 119
           + +NA I      G   +A+E     E  +ID    + T+C+ L  C+D   L  G ++H
Sbjct: 125 ETWNAFISNSVTDGRPREAIEAFI--EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLH 182

Query: 120 SIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
            ++  SG   D  V    L+  +  C  ++    +F ++       W  L+  Y +    
Sbjct: 183 GLVLRSGFDTDVSVCNG-LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHED 241

Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------------ 209
           +++  L+ + +   +    +  S VL   A                              
Sbjct: 242 EKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSAL 301

Query: 210 --VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNV 265
             + G    ++D+ + FDE+ ++++V+ N +I GY   G  +  L +F+EM     G   
Sbjct: 302 VDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTP 361

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN--TLLDMYSKCGDLDGAIR 323
           +  T V++LS C+  GA+  G  +   ++++ +  E    +   ++DM  + G ++ A  
Sbjct: 362 NYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYE 420

Query: 324 VFEKMGERSVVS-WTSM 339
             +KM  +  +S W ++
Sbjct: 421 FIKKMPIQPTISVWGAL 437


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 252/809 (31%), Positives = 417/809 (51%), Gaps = 84/809 (10%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L L      +E  K VH+ I +   + +D  L + L+  ++  G +    +VF  +   
Sbjct: 78  LLDLSVRYDDVELIKAVHASIFK---LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCP 134

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-------------- 207
            V  +  ++  ++K+   ++++ +F +M+S GI  + ++F  +L                
Sbjct: 135 NVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLH 194

Query: 208 ------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                             + + G    +    +LFDE+  RD+ SWN +IS  +   + E
Sbjct: 195 AIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYE 254

Query: 250 KGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           +  E+F++M  + GF +D  T+ T+L   A   A M GR +HA  +K  F   IS  N L
Sbjct: 255 RAFELFRDMRRIDGFRIDHFTLSTILVA-ARGLASMVGREIHAHVIKIGFESNISVINAL 313

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM--------- 359
           +  Y+KCG +   + +FEKM  R V++WT MI  Y   G+ D A+ +F  M         
Sbjct: 314 IRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYN 373

Query: 360 ----------------------VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
                                 V EG+E   + +T +L+AC      +I K +H +I + 
Sbjct: 374 AILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKF 433

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI--VSWNTMI----------GALD 445
              S+  +  AL+DM  +CG MADA+ +F+Q        + W +MI           A+ 
Sbjct: 434 GFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAIS 493

Query: 446 LFV-AMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           LF  + L+     D V    +L  C +LA  E G++IH + L+ G  +D  V N+I+ MY
Sbjct: 494 LFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMY 553

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KC  +  A  +F+++PA D++SW  +IAG+ +H  G +A++ ++ M +AGI+PD V+F+
Sbjct: 554 SKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFV 613

Query: 564 SVLYACSH--SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
            ++ A  H  S LVD   R F  M+   +I+P +EHY  +V +L   G L EA   I  M
Sbjct: 614 LIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKM 673

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P+ P+A++W +LL  CRIH    + ++ A+H+  ++P +   Y+L++N+Y+   +W    
Sbjct: 674 PIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSD 733

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
            +RE++  +G +K+PG SWI  + KV+ F A   SHP AK I S L+ L +E  + GY P
Sbjct: 734 MVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVP 793

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            T + L   +E +K+  L  HS K+A  +G+L    G+ IR+ KN+ +CGDCH   K++S
Sbjct: 794 DTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVS 853

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               REI LRD++  H F +G+CSC+ +W
Sbjct: 854 IVTGREIFLRDASGHHCFLNGQCSCKDYW 882


>gi|358347383|ref|XP_003637737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503672|gb|AES84875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 561

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/579 (34%), Positives = 332/579 (57%), Gaps = 20/579 (3%)

Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           L  F+ + +LGF  D  ++ + L      G    G+ +H + +++  + ++    +L+DM
Sbjct: 3   LTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDM 62

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           Y K   L+ A  V  +   ++V +W S+I+GY+ +G F  A++L   MV EGI PD+   
Sbjct: 63  YVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTW 122

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
             ++   +  G ++    + + IK + +  ++    AL+   ++     DA  +F+QM  
Sbjct: 123 NGLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQA 182

Query: 432 KDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
                               +N +P+  T+  +L ACA  + L++G E+H + ++ G   
Sbjct: 183 --------------------ENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVD 222

Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
           D  VA A++DMY + G L +A ++F+ I  K L  W  M+ GY +H  G + +  ++ MR
Sbjct: 223 DIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMR 282

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
           +  I PD ++F ++L AC +SGLVDEGW++F+ M+ + NI P +EHY CMVDLL ++G L
Sbjct: 283 ERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFL 342

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVY 671
            EA  FIE MP+ PDA+IWG+LL  C+IH  +KLAE  A  +F++EP+N+  YVL+ N+Y
Sbjct: 343 DEASHFIETMPIKPDASIWGALLASCKIHKNIKLAEIAARKLFKMEPNNSANYVLMMNLY 402

Query: 672 AEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLR 731
           +   +W  V++L+  ++   +K  P  SW ++   +++F   G  HP   +I   L +L 
Sbjct: 403 SSLNRWVAVERLKHSMTVLAMKIPPVWSWTQVNQSIHVFSTEGRPHPEEGEIYFELYQLI 462

Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
            E+++ GY P       N D+ EKE  L  H+EKLAM +G++ +  G  IR+ KN R+C 
Sbjct: 463 SEIRKLGYAPDLNCVCQNIDDNEKEKILMSHTEKLAMVYGVMKMKGGSPIRIVKNTRICF 522

Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           DCH +AK++S   +REI+LRD  RFHHFK+G+C+C   W
Sbjct: 523 DCHTVAKYISLVRKREILLRDGGRFHHFKNGKCACNDRW 561



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 172/357 (48%), Gaps = 10/357 (2%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K D+ +  S LQ   +L   + GK++H  I  S +  D  V  S LV M+V    L++ +
Sbjct: 15  KPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTS-LVDMYVKNDCLEKAQ 73

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
            V ++  N  V  WN L+  YS  G F E++ L  +M   GI  D  T++ ++   ++ G
Sbjct: 74  AVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQG 133

Query: 213 NSRRVKDAHKLFDELSDR----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
              R+ +A  + + +       +VVSW  +ISG   N      L++F +M       +  
Sbjct: 134 ---RIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNST 190

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T+ ++L  CA    L  G  +H F++K  F  +I     L+DMYS+ G L  A  VF K+
Sbjct: 191 TICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKI 250

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            E+++  W  M+ GYA     +  + L+  M    I PD    T++L AC   GL++ G 
Sbjct: 251 QEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLVDEGW 310

Query: 389 DVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
              D ++E+ ++  ++     ++D+  K G + +A      MP+K D   W  ++ +
Sbjct: 311 KYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIETMPIKPDASIWGALLAS 367



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 9/155 (5%)

Query: 80  EKAMEVL-----YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           EK M+ L       +E  K ++ T CS+L  CA    L+ G+++H    + G V DD  +
Sbjct: 168 EKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFV-DDIYV 226

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
            + L+ M+   G LK    VFNKI    +  WN +M  Y+   + +E + L+ KM+   I
Sbjct: 227 ATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHI 286

Query: 195 AADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD 229
             D+ TF+ +   L+   NS  V +  K FD + +
Sbjct: 287 RPDAITFTAL---LSACKNSGLVDEGWKYFDSMQE 318


>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
          Length = 615

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/589 (38%), Positives = 344/589 (58%), Gaps = 33/589 (5%)

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKE---ISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           TVL  C++   L   + +HAF L+  + +E   +     +L + S   D++ A RVF+ +
Sbjct: 30  TVLQTCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 86

Query: 329 GERSVVSWTSMIAGYARE-GVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEI 386
              S   W ++I   A +    + A  L+R M+  G   PD +    +L ACA       
Sbjct: 87  ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE 146

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----- 441
           GK VH  I ++     +YV+N L+ +Y  CG +  A  VF++MP + +VSWN+MI     
Sbjct: 147 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 206

Query: 442 -----GALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRH---GISADR 493
                 AL LF  M ++FEPDG TM  +L ACA L +L  G   H ++LR     ++ D 
Sbjct: 207 FGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDV 266

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM--R 551
            V N++++MY KCG L +A  +F  +  +DL SW  MI G+  HG   +A+  F+ M  +
Sbjct: 267 LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 326

Query: 552 QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
           +  + P+ V+F+ +L AC+H G V++G ++F+MM  +  IEP LEHY C+VDL++R G +
Sbjct: 327 RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYI 386

Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGC-RIHHEVKLAEKVAEHVFELEPDN-------TGY 663
           +EA   +  MP+ PDA IW SLL  C +    V+L+E++A ++   + DN       +G 
Sbjct: 387 TEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGA 446

Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKI 723
           YVLL+ VYA A +W +V  +R+ +S  G++K PGCS IEI G  + F AG +SHP  K+I
Sbjct: 447 YVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQI 506

Query: 724 ESLLKRLRLEMKREGYFP-KTRYALINA-DEMEKEVALCGHSEKLAMAFGILNLPAGQTI 781
              LK +   ++  GY P +++  L++A ++  KE +L  HSE+LA+AFG++NLP    I
Sbjct: 507 YQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPI 566

Query: 782 RVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           R+ KNLRVC DCHE+ K +SK    EI++RD  RFHHFKDG CSC  +W
Sbjct: 567 RIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 615



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 23/347 (6%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA--EKGLEVFKEMLNLG- 262
           K L +  +   V  A ++FD + +     WN +I    A+ V+  E+   ++++ML  G 
Sbjct: 65  KILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRA-CAHDVSRKEEAFMLYRKMLERGE 123

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
            + D  T   VL  CA       G+ VH   +K  F  ++  NN L+ +Y  CG LD A 
Sbjct: 124 SSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLAR 183

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
           +VF++M ERS+VSW SMI    R G +D A++LFR M R   EPD Y + S+L ACA  G
Sbjct: 184 KVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLG 242

Query: 383 LLEIGKDVHDYIKEN---DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
            L +G   H ++      D+   + V N+L++MY KCGS+  AE VF  M  +D+ SWN 
Sbjct: 243 SLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNA 302

Query: 440 MI----------GALDLFVAML---QNFEPDGVTMACILPACASLAALERGREIHGYILR 486
           MI           A++ F  M+   +N  P+ VT   +L AC     + +GR+    ++R
Sbjct: 303 MILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR 362

Query: 487 -HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMI 531
            + I         IVD+  + G +  A  +   +P K D + W  ++
Sbjct: 363 DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 409



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 191/393 (48%), Gaps = 53/393 (13%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL--GSKLVFMFVTCGDLKEGRRV 154
           + + ++LQ C+D+  L   K++H+    +    +   L    K++ +  +  D+    RV
Sbjct: 26  RVHATVLQTCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRV 82

Query: 155 FNKIDNGKVFIWNLLM----HEYSKTGNFKESLYLFKKMQSLGIAA-DSYTFSCVLKCLA 209
           F+ I+N   F+WN L+    H+ S+    +E+  L++KM   G ++ D +TF  VLK  A
Sbjct: 83  FDSIENHSSFMWNTLIRACAHDVSRK---EEAFMLYRKMLERGESSPDKHTFPFVLKACA 139

Query: 210 VVGNSRRVKDAH--------------------------------KLFDELSDRDVVSWNC 237
            +      K  H                                K+FDE+ +R +VSWN 
Sbjct: 140 YIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNS 199

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           MI   +  G  +  L++F+EM    F  D  TM +VLS CA  G+L  G   HAF L+ C
Sbjct: 200 MIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC 258

Query: 298 ---FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
               + ++   N+L++MY KCG L  A +VF+ M +R + SW +MI G+A  G  + A+ 
Sbjct: 259 DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMN 318

Query: 355 LFRGMV--REGIEPDVYAITSILHACACDGLLEIGKDVHD-YIKENDMQSSLYVSNALMD 411
            F  MV  RE + P+      +L AC   G +  G+   D  +++  ++ +L     ++D
Sbjct: 319 FFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVD 378

Query: 412 MYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           + A+ G + +A  +   MP+K D V W +++ A
Sbjct: 379 LIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 411



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 128/296 (43%), Gaps = 41/296 (13%)

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           +S  D  T+  +L+ CA +    +GK+VH  I + G    D  + + L+ ++ +CG L  
Sbjct: 123 ESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFG-GDVYVNNGLIHLYGSCGCLDL 181

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL----- 205
            R+VF+++    +  WN ++    + G +  +L LF++MQ      D YT   VL     
Sbjct: 182 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAG 240

Query: 206 ----------------KCLAVVGNSRRVKD--------------AHKLFDELSDRDVVSW 235
                           KC   V     VK+              A ++F  +  RD+ SW
Sbjct: 241 LGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASW 300

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFA 293
           N MI G+  +G AE+ +  F  M++   NV  +  T V +L  C + G +  GR      
Sbjct: 301 NAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM 360

Query: 294 LKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAGYAREG 347
           ++  C    +     ++D+ ++ G +  AI +   M  +   V W S++    ++G
Sbjct: 361 VRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 416


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 240/688 (34%), Positives = 367/688 (53%), Gaps = 46/688 (6%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           +++  +L  C   K L+ GK +H+ +  +G       L + LV ++  CG + + + VF 
Sbjct: 11  RSFVDLLLRCTRQKDLQKGKAIHAQLLRTG-SFSSVYLTNSLVNLYAKCGSIVKAKLVFE 69

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKES--LYLFKKMQSLGIAADSYTFSCVLKC------- 207
            I N  V  WN L++ YS+ G    S  + LF++M++     + +TFS V          
Sbjct: 70  SITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPET 129

Query: 208 --------LAV---------VGNSRR--------VKDAHKLFDELSDRDVVSWNCMISGY 242
                   LA+         VG+S          + DA K+FD + +R+ VSW  +ISGY
Sbjct: 130 FGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGY 189

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
               +A +  E+F  M       D     +VLS       + +G+ +H  ALK       
Sbjct: 190 AMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIA 249

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
           S  N L+ MY KCG LD A++ FE  G++  ++W++MI GYA+ G    A+ LF  M   
Sbjct: 250 SVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLN 309

Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADA 422
           G +P  +    +++AC+  G LE GK +H Y  +   +  +Y   AL+DMYAKCGS+ DA
Sbjct: 310 GNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDA 369

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASL 471
              F+ +   DIV W +MI           AL L+  M ++   P  +TMA +L AC+SL
Sbjct: 370 RKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSL 429

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
           AALE+G++IH   +++G S +  + +A+  MY KCG L     +F  +P++D+++W  MI
Sbjct: 430 AALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMI 489

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           +G   +G G  A+  F ++R    +PD V+F++VL ACSH GLV+ G  +F MM  E  I
Sbjct: 490 SGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGI 549

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
            P++EHYACMVD+LSR G L E   FIE   +     +W  LL  CR +   +L     E
Sbjct: 550 VPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGE 609

Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
            + EL    +  Y+LL+++Y    + ++V+++R  +  RG+ K PGCSWIE+K +V++FV
Sbjct: 610 KLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFV 669

Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGY 739
            G   HP   KI S L+RLR  MK E Y
Sbjct: 670 VGDQIHPQIVKICSELRRLRDHMKDECY 697



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 150/335 (44%), Gaps = 33/335 (9%)

Query: 86  LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTC 145
           L   E+   D   Y S+L        +  GK++H +  ++G+ +    +G+ LV M+  C
Sbjct: 204 LMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGL-LSIASVGNALVTMYGKC 262

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           G L +  + F    +     W+ ++  Y++ G+  E+L LF  M   G     +TF  V+
Sbjct: 263 GCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVI 322

Query: 206 KCLAVVGNSRRVK--------------------------------DAHKLFDELSDRDVV 233
              + +G     K                                DA K FD L + D+V
Sbjct: 323 NACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIV 382

Query: 234 SWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFA 293
            W  MISGY  NG  E  L ++  M          TM +VL  C++  AL  G+ +HA  
Sbjct: 383 LWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQT 442

Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
           +K  FS E+   + L  MY+KCG L+    VF +M  R +++W +MI+G ++ G    A+
Sbjct: 443 IKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKAL 502

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
            LF  +     +PD     ++L AC+  GL+E GK
Sbjct: 503 ELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGK 537



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 15/286 (5%)

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           + P   +   +L  C     L+ GK +H  +      SS+Y++N+L+++YAKCGS+  A+
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65

Query: 424 SVFNQMPVKDIVSWNTMIGA------------LDLFVAM-LQNFEPDGVTMACILPACAS 470
            VF  +  KD+VSWN +I              ++LF  M  +N  P+G T + +  A +S
Sbjct: 66  LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125

Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
                 G + H   ++     D  V +++++MY K G ++ AR +FD IP ++ +SW  +
Sbjct: 126 SPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATI 185

Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
           I+GY M     +A   F  MR+     D+  + SVL A +   LV  G +  + +  +  
Sbjct: 186 ISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYG-KQIHCLALKNG 244

Query: 591 IEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           +         +V +  + G L +A +  E+     D T W +++ G
Sbjct: 245 LLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDIT-WSAMITG 289


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/663 (34%), Positives = 372/663 (56%), Gaps = 60/663 (9%)

Query: 150 EGRRVFNKID----NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
           + RR+  +I     + ++FI N L+  Y K G F+++  +F +M       ++++++ VL
Sbjct: 37  DARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQ----RNTFSYNAVL 92

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
             L   G   ++ +A  +F  + + D  SWN M+SG+  +   E+ L  F +M +  F +
Sbjct: 93  SVLTKFG---KLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVL 149

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +  +  + LS CA    L  G  +HA   K+ +  ++   + L+DMYSKCG +  A R F
Sbjct: 150 NEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAF 209

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           + M  R++VSW S+I  Y + G    A+ +F  M+  G+EPD   + S++ ACA    + 
Sbjct: 210 DGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIR 269

Query: 386 IGKDVH-DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV------------- 431
            G  +H   +K +  ++ L + NAL+DMYAKC  + +A  VF++MP+             
Sbjct: 270 EGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGY 329

Query: 432 ------------------KDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMA 462
                             K++VSWN +I           A+ LF+ +  ++  P   T  
Sbjct: 330 ARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFG 389

Query: 463 CILPACASLAALERGREIHGYILRHGI------SADRNVANAIVDMYVKCGVLVLARSLF 516
            +L ACA+LA L+ GR+ H  IL+HG        +D  V N+++DMY+KCG++     +F
Sbjct: 390 NLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVF 449

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           + +  +D++SW  MI GY  +G+G +A+  F  M  +G +PD V+ I VL ACSH+GLV+
Sbjct: 450 ERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVE 509

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           EG R+F+ MR E  + P  +H+ CMVDLL R G L EA   I+ MP+ PD  +WGSLL  
Sbjct: 510 EGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAA 569

Query: 637 CRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
           C++H  ++L + VAE + E++P N+G YVLL+N+YAE  +W++V ++R+++ +RG+ K P
Sbjct: 570 CKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQP 629

Query: 697 GCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKE 756
           GCSWIEI+ +V++F+     HP  K I  +LK L  +MK  GY P+     I  +E + E
Sbjct: 630 GCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPEADDDEICEEESDSE 689

Query: 757 VAL 759
           + L
Sbjct: 690 LVL 692



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 202/392 (51%), Gaps = 51/392 (13%)

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           +D +    +L  C    + +  R +HA  +K  FS EI   N L+D Y KCG  + A +V
Sbjct: 17  LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76

Query: 325 FEKMGERSVV-------------------------------SWTSMIAGYAREGVFDGAI 353
           F++M +R+                                 SW +M++G+A+   F+ A+
Sbjct: 77  FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136

Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
           R F  M  E    + Y+  S L ACA    L +G  +H  I ++     +Y+ +AL+DMY
Sbjct: 137 RFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMY 196

Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMA 462
           +KCG +A A+  F+ M V++IVSWN++I           AL++FV M+ N  EPD +T+A
Sbjct: 197 SKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLA 256

Query: 463 CILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
            ++ ACAS +A+  G +IH  ++ R     D  + NA+VDMY KC  +  AR +FD +P 
Sbjct: 257 SVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316

Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
           ++++S T M+ GY        A   F++M    +E + VS+ +++   + +G  +E  R 
Sbjct: 317 RNVVSETSMVCGYARAASVKAARLMFSNM----MEKNVVSWNALIAGYTQNGENEEAVRL 372

Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
           F +++ E +I P   HY    +LL+   NL++
Sbjct: 373 FLLLKRE-SIWPT--HYT-FGNLLNACANLAD 400



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 202/453 (44%), Gaps = 75/453 (16%)

Query: 65  NYNAEIGRFCEVGNLEKAME--VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++NA +  F +    E+A+   V   SE   ++  ++ S L  CA L  L  G ++H++I
Sbjct: 118 SWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALI 177

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            +S  ++D   +GS LV M+  CG +   +R F+ +    +  WN L+  Y + G   ++
Sbjct: 178 SKSRYLLD-VYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKA 236

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA-------------------------VVGNS--- 214
           L +F  M   G+  D  T + V+   A                         V+GN+   
Sbjct: 237 LEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVD 296

Query: 215 -----RRVKDAHKLFDELS-------------------------------DRDVVSWNCM 238
                RRV +A  +FD +                                +++VVSWN +
Sbjct: 297 MYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNAL 356

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I+GY  NG  E+ + +F  +          T   +L+ CAN   L  GR  H   LK  F
Sbjct: 357 IAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGF 416

Query: 299 ------SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
                   +I   N+L+DMY KCG ++    VFE+M ER VVSW +MI GYA+ G    A
Sbjct: 417 WFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNA 476

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD-VHDYIKENDMQSSLYVSNALMD 411
           + +FR M+  G +PD   +  +L AC+  GL+E G+   H    E  +         ++D
Sbjct: 477 LEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVD 536

Query: 412 MYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
           +  + G + +A  +   MP++ D V W +++ A
Sbjct: 537 LLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAA 569


>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g40410, mitochondrial; Flags: Precursor
 gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
 gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 608

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/583 (37%), Positives = 336/583 (57%), Gaps = 26/583 (4%)

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           A + ++++   +C ++   R +H   +K+   +     + L+  Y + G    A ++F++
Sbjct: 32  ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIR-LFRGMVRE-GIEPDVYAITSILHACACDGLLE 385
           M ER +VSW S+I+GY+  G        L R M+ E G  P+     S++ AC   G  E
Sbjct: 92  MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD 445
            G+ +H  + +  +   + V NA ++ Y K G +  +  +F  + +K++VSWNTMI    
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI---- 207

Query: 446 LFVAMLQN-----------------FEPDGVTMACILPACASLAALERGREIHGYILRHG 488
             V  LQN                  EPD  T   +L +C  +  +   + IHG I+  G
Sbjct: 208 --VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265

Query: 489 ISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFN 548
            S ++ +  A++D+Y K G L  + ++F  I + D ++WT M+A Y  HGFG DAI  F 
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFE 325

Query: 549 DMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
            M   GI PD V+F  +L ACSHSGLV+EG  +F  M     I+P+L+HY+CMVDLL R+
Sbjct: 326 LMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRS 385

Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLA 668
           G L +AY  I+ MP+ P + +WG+LL  CR++ + +L  K AE +FELEP +   YV+L+
Sbjct: 386 GLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLS 445

Query: 669 NVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLK 728
           N+Y+ +  W++  ++R  + ++GL +  GCS+IE   K++ FV G  SHP ++KI+  LK
Sbjct: 446 NIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLK 505

Query: 729 RLRLEMKRE-GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNL 787
            +R +MK E GY  KT + L +  E  KE  +  HSEK+AMAFG+L +   + I + KNL
Sbjct: 506 EIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNL 565

Query: 788 RVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           R+CGDCHE AK +S   +R I++RDS RFHHF DG CSC  +W
Sbjct: 566 RICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 185/390 (47%), Gaps = 32/390 (8%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSGC 277
           A KLFDE+ +RD+VSWN +ISGY   G   K  EV   M+   +GF  +  T ++++S C
Sbjct: 85  AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
              G+   GR +H   +K    +E+   N  ++ Y K GDL  + ++FE +  +++VSW 
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           +MI  + + G+ +  +  F    R G EPD     ++L +C   G++ + + +H  I   
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
               +  ++ AL+D+Y+K G + D+ +VF+++   D ++W  M+           A+  F
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324

Query: 448 VAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVANAIVDMYVK 505
             M+     PD VT   +L AC+    +E G+     +  R+ I    +  + +VD+  +
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM--------RQAGIEP 557
            G+L  A  L   +P         M    G+ G    A   + D         R   +EP
Sbjct: 385 SGLLQDAYGLIKEMP---------MEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEP 435

Query: 558 -DEVSFISVLYACSHSGLVDEGWRFFNMMR 586
            D  +++ +    S SGL  +  R  N+M+
Sbjct: 436 RDGRNYVMLSNIYSASGLWKDASRIRNLMK 465



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 166/352 (47%), Gaps = 36/352 (10%)

Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-- 189
           G +G +LV  ++  G      ++F+++    +  WN L+  YS  G   +   +  +M  
Sbjct: 66  GFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMI 125

Query: 190 QSLGIAADSYTF-----SCV--------------------LKCLAVV-------GNSRRV 217
             +G   +  TF     +CV                    L+ + VV       G +  +
Sbjct: 126 SEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDL 185

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
             + KLF++LS +++VSWN MI  ++ NG+AEKGL  F     +G   D AT + VL  C
Sbjct: 186 TSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSC 245

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
            + G +   + +H   +   FS        LLD+YSK G L+ +  VF ++     ++WT
Sbjct: 246 EDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWT 305

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KE 396
           +M+A YA  G    AI+ F  MV  GI PD    T +L+AC+  GL+E GK   + + K 
Sbjct: 306 AMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALDLF 447
             +   L   + ++D+  + G + DA  +  +MP++     W  ++GA  ++
Sbjct: 366 YRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVY 417



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/410 (21%), Positives = 165/410 (40%), Gaps = 77/410 (18%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK----TYCSILQLCADLKSLEDGKKVHS 120
           ++N+ I  +   G L K  EVL     S++  +    T+ S++  C    S E+G+ +H 
Sbjct: 99  SWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHG 158

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           ++ + G++ +  V+ +  +  +   GDL    ++F  +    +  WN ++  + + G  +
Sbjct: 159 LVMKFGVLEEVKVVNA-FINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAE 217

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR------------------------- 215
           + L  F   + +G   D  TF  VL+    +G  R                         
Sbjct: 218 KGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALL 277

Query: 216 -------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                  R++D+  +F E++  D ++W  M++ Y  +G     ++ F+ M++ G + D  
Sbjct: 278 DLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHV 337

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
           T   +L+ C++ G +  G+  H F      SK    +   LD YS   DL G        
Sbjct: 338 TFTHLLNACSHSGLVEEGK--HYF---ETMSKRYRIDPR-LDHYSCMVDLLG-------- 383

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
                           R G+   A  L + M    +EP      ++L AC      ++G 
Sbjct: 384 ----------------RSGLLQDAYGLIKEM---PMEPSSGVWGALLGACRVYKDTQLGT 424

Query: 389 DVHDYIKE---NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
              + + E    D ++ + +SN    +Y+  G   DA  + N M  K +V
Sbjct: 425 KAAERLFELEPRDGRNYVMLSN----IYSASGLWKDASRIRNLMKQKGLV 470


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 256/725 (35%), Positives = 370/725 (51%), Gaps = 52/725 (7%)

Query: 129  IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
            + D  + S LV  F   G   + + +F ++    V   N LM    K    + +  +F +
Sbjct: 314  LQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHE 373

Query: 189  MQSL-GIAADSYT-FSCVLKCLAVVGNSRR------------------------------ 216
            M+ L GI +DSY          +V+   RR                              
Sbjct: 374  MKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYA 433

Query: 217  ----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVT 272
                + DA  +F+ + ++D VSWN +ISG   N  +E   E F  M   G      T+++
Sbjct: 434  KSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLIS 493

Query: 273  VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
             LS CA+ G +M G  +H   LK     ++S +N LL +Y++ G     ++VF  M E  
Sbjct: 494  TLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYD 553

Query: 333  VVSWTSMIAGYA-REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
             VSW S+I   +  E     A++ F  M+R G         +IL A +   L E+   +H
Sbjct: 554  QVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIH 613

Query: 392  DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTMIG-------- 442
              + +  +     + NAL+  Y KCG M + E +F +M   +D VSWN+MI         
Sbjct: 614  ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELL 673

Query: 443  --ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
              A+DL   M+Q  +  D  T A IL ACAS+A LERG E+H   +R  + +D  V +A+
Sbjct: 674  HKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSAL 733

Query: 500  VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
            VDMY KCG +  A   F+++P +++ SW  MI+GY  HG G  A+  F  M   G  PD 
Sbjct: 734  VDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDH 793

Query: 560  VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            V+F+ VL ACSH G V+EG+  F  M     + P++EH++CMVDLL R G L E   FI 
Sbjct: 794  VTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFIN 853

Query: 620  MMPVAPDATIWGSLLCG-CRIH-HEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
             MP+ P+  IW ++L   CR +    +L  + AE + ELEP N   YVLLAN+YA  EKW
Sbjct: 854  SMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKW 913

Query: 678  EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
            E+V K R  +    +KK  GCSW+ +K  V++FVAG   HP    I   L+ L  +M+  
Sbjct: 914  EDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDA 973

Query: 738  GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
            GY P+T+YAL + +   KE  L  HSEK+A+AF +L   +   IR+ KNLRVCGDCH   
Sbjct: 974  GYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAF 1032

Query: 798  KFMSK 802
             ++SK
Sbjct: 1033 GYISK 1037



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 172/589 (29%), Positives = 278/589 (47%), Gaps = 73/589 (12%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD-LKEGRRVFNKIDNGKVFIWNLLMHEY 173
           G ++H +I ++     D V+ + L+ M+ +C D   + R VF+ I       WN ++  Y
Sbjct: 193 GVQIHGLISKTRYG-SDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVY 251

Query: 174 SKTGNFKESLYLFKKMQSLGIA----ADSYTFS--------------CVLKCL------- 208
           S+ G+   +  LF  MQ  G+      + YTF               CVL+ +       
Sbjct: 252 SRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKS 311

Query: 209 ----------AVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
                     A+V    R     DA  +F+++  R+VVS N ++ G +     E   +VF
Sbjct: 312 GFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVF 371

Query: 256 KEMLNL-GFNVDLATMVTVLSGCANCGAL----MFGRAVHAFALKACFS-KEISFNNTLL 309
            EM +L G N D  + V +LS  +    L      GR VHA  ++   +  +++  N L+
Sbjct: 372 HEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 429

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
           +MY+K G +  A  VFE M E+  VSW S+I+G  +    + A   F  M R G  P  +
Sbjct: 430 NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNF 489

Query: 370 AITSILHACACDGLLEIGKDVH-DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
            + S L +CA  G + +G+ +H D +K   + + + VSNAL+ +YA+ G   +   VF+ 
Sbjct: 490 TLISTLSSCASLGWIMLGEQIHCDGLKLG-LDTDVSVSNALLALYAETGCFTECLKVFSL 548

Query: 429 MPVKDIVSWNTMIGALD-----------LFVAMLQ-NFEPDGVTMACILPACASLAALER 476
           MP  D VSWN++IGAL             F+ M++  +    VT   IL A +SL+  E 
Sbjct: 549 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEV 608

Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF-DMIPAKDLISWTIMIAGYG 535
             +IH  +L++ +S D  + NA++  Y KCG +     +F  M   +D +SW  MI+GY 
Sbjct: 609 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 668

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
            +     A+     M Q G   D  +F ++L AC+    ++ G     M  + C I   L
Sbjct: 669 HNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERG-----MEVHACGIRACL 723

Query: 596 EHY----ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           E      + +VD+ S+ G +  A RF E+MP+  +   W S++ G   H
Sbjct: 724 ESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARH 771



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 226/439 (51%), Gaps = 26/439 (5%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
           A KLFDE+S+R++V+W C+ISGY  NG  ++    F++M+  GF  +     + L  C  
Sbjct: 125 AQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE 184

Query: 280 CG--ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD-LDGAIRVFEKMGERSVVSW 336
            G      G  +H    K  +  ++   N L+ MY  C D  + A  VF+ +G R+ +SW
Sbjct: 185 SGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISW 244

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGI----EPDVYAITSIL-HAC-ACDGLLEIGKDV 390
            S+I+ Y+R G    A  LF  M +EG+    +P+ Y   S++  AC + D  L + + +
Sbjct: 245 NSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQM 304

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN-TMIG------- 442
              ++++     LYVS+AL+  +A+ G   DA+++F QM V+++VS N  M+G       
Sbjct: 305 LARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQG 364

Query: 443 --ALDLFVAMLQNFEPDGVTMACILPACASLAALE----RGREIHGYILRHGISADR-NV 495
             A  +F  M      +  +   +L A +  + LE    +GRE+H +++R G++ ++  +
Sbjct: 365 EAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAI 424

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            N +V+MY K G +  A S+F+++  KD +SW  +I+G   +    DA  +F+ MR+ G 
Sbjct: 425 GNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGS 484

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
            P   + IS L +C+  G +  G +  +    +  ++  +     ++ L + TG  +E  
Sbjct: 485 MPSNFTLISTLSSCASLGWIMLGEQ-IHCDGLKLGLDTDVSVSNALLALYAETGCFTECL 543

Query: 616 RFIEMMPVAPDATIWGSLL 634
           +   +MP   D   W S++
Sbjct: 544 KVFSLMP-EYDQVSWNSVI 561



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 198/380 (52%), Gaps = 36/380 (9%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
            R +H  ++K  F   +  +NTL+++Y + GDL  A ++F++M  R++V+W  +I+GY +
Sbjct: 90  ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGL--LEIGKDVHDYIKENDMQSSL 403
            G  D A   FR MVR G  P+ YA  S L AC   G    ++G  +H  I +    S +
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 209

Query: 404 YVSNALMDMYAKC-GSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ 452
            V N L+ MY  C  S  DA SVF+ + +++ +SWN++I           A DLF +M +
Sbjct: 210 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 269

Query: 453 -----NFEPDGVTM-ACILPACAS----LAALERGREIHGYILRHGISADRNVANAIVDM 502
                +F+P+  T  + I  AC+S    L  LE   ++   + + G   D  V++A+V  
Sbjct: 270 EGLGFSFKPNEYTFGSLITTACSSVDFGLCVLE---QMLARVEKSGFLQDLYVSSALVSG 326

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ-AGIEPDEVS 561
           + + G+   A+++F+ +  ++++S   ++ G      G  A   F++M+   GI  D  S
Sbjct: 327 FARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD--S 384

Query: 562 FISVLYACSHSGLVDEGWR-----FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR 616
           ++ +L A S   +++EG R       +++R   N + K+     +V++ +++G +++A  
Sbjct: 385 YVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN-DNKVAIGNGLVNMYAKSGAIADACS 443

Query: 617 FIEMMPVAPDATIWGSLLCG 636
             E+M V  D+  W SL+ G
Sbjct: 444 VFELM-VEKDSVSWNSLISG 462



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 60/99 (60%)

Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
           E  RE+H   +++G   +  ++N ++++YV+ G L  A+ LFD +  ++L++W  +I+GY
Sbjct: 88  EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147

Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
             +G   +A A F DM +AG  P+  +F S L AC  SG
Sbjct: 148 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 20/291 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY--SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N+ I  +     L KAM++++    +  ++D+ T+ +IL  CA + +LE G +VH+  
Sbjct: 659 SWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACG 718

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
             + +   D V+GS LV M+  CG +    R F  +    V+ WN ++  Y++ G+ +++
Sbjct: 719 IRACLE-SDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKA 777

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDE---LSDRDVVSWNCMI 239
           L LF +M   G   D  TF  VL   + VG      +  K   E   LS R V  ++CM+
Sbjct: 778 LKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPR-VEHFSCMV 836

Query: 240 SGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC--ANCGALMFGRAVHAFALKAC 297
                 G A K  EV   + ++    ++    TVL  C  AN      GR      L+  
Sbjct: 837 DLL---GRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLE-- 891

Query: 298 FSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSV-----VSWTSMIAG 342
              + + N  LL +MY+     +   +    M E +V      SW +M  G
Sbjct: 892 LEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDG 942


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 252/809 (31%), Positives = 417/809 (51%), Gaps = 84/809 (10%)

Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNG 161
           +L L      +E  K VH+ I +   + +D  L + L+  ++  G +    +VF  +   
Sbjct: 96  LLDLSVRYDDVELIKAVHASIFK---LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCP 152

Query: 162 KVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-------------- 207
            V  +  ++  ++K+   ++++ +F +M+S GI  + ++F  +L                
Sbjct: 153 NVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLH 212

Query: 208 ------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
                             + + G    +    +LFDE+  RD+ SWN +IS  +   + E
Sbjct: 213 AIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYE 272

Query: 250 KGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
           +  E+F++M  + GF +D  T+ T+L   A   A M GR +HA  +K  F   IS  N L
Sbjct: 273 RAFELFRDMRRIDGFRIDHFTLSTILVA-ARGLASMVGREIHAHVIKIGFESNISVINAL 331

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM--------- 359
           +  Y+KCG +   + +FEKM  R V++WT MI  Y   G+ D A+ +F  M         
Sbjct: 332 IRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYN 391

Query: 360 ----------------------VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
                                 V EG+E   + +T +L+AC      +I K +H +I + 
Sbjct: 392 AILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKF 451

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI--VSWNTMI----------GALD 445
              S+  +  AL+DM  +CG MADA+ +F+Q        + W +MI           A+ 
Sbjct: 452 GFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAIS 511

Query: 446 LFV-AMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
           LF  + L+     D V    +L  C +LA  E G++IH + L+ G  +D  V N+I+ MY
Sbjct: 512 LFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMY 571

Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
            KC  +  A  +F+++PA D++SW  +IAG+ +H  G +A++ ++ M +AGI+PD V+F+
Sbjct: 572 SKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFV 631

Query: 564 SVLYACSH--SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
            ++ A  H  S LVD   R F  M+   +I+P +EHY  +V +L   G L EA   I  M
Sbjct: 632 LIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKM 691

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
           P+ P+A++W +LL  CRIH    + ++ A+H+  ++P +   Y+L++N+Y+   +W    
Sbjct: 692 PIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSD 751

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
            +RE++  +G +K+PG SWI  + KV+ F A   SHP AK I S L+ L +E  + GY P
Sbjct: 752 MVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVP 811

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
            T + L   +E +K+  L  HS K+A  +G+L    G+ IR+ KN+ +CGDCH   K++S
Sbjct: 812 DTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVS 871

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               REI LRD++  H F +G+CSC+ +W
Sbjct: 872 IVTGREIFLRDASGHHCFLNGQCSCKDYW 900


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/703 (32%), Positives = 374/703 (53%), Gaps = 47/703 (6%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG-VLGSKLVFMFVTCGDLKE 150
           S +  +    +L+ C D + L+  K VH  + +S        VL + +   +  C D+  
Sbjct: 64  SHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDA 123

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CLA 209
             R+F+++     F W +L+   ++ G F +    F +MQS GI  D + +S +L+ C+ 
Sbjct: 124 ACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIG 183

Query: 210 V----VGNS---------------------------RRVKDAHKLFDELSDRDVVSWNCM 238
           +    +GN                            + ++D++K+F+ +++ +VVSWN M
Sbjct: 184 LDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAM 243

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I+G+ +N +     ++F  M+  G   D  T + V         +   + V  +AL+   
Sbjct: 244 ITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGV 303

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEK--MGERSVVSWTSMIAGYAREGVFDGAIRLF 356
                    L+DM SKCG L  A  +F    +  R    W +MI+GY R G  + A+ LF
Sbjct: 304 DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELF 363

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVH-DYIKENDMQSSLYVSNALMDMYAK 415
             M +  I  D Y   S+ +A A    L +GK VH   IK     + + +SNA+ + YAK
Sbjct: 364 AKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAK 423

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACI 464
           CGS+ D   VFN+M  +D++SW +++ A          +++F  M  +   P+  T + +
Sbjct: 424 CGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSV 483

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           L +CA+L  LE G+++HG I + G+  D+ + +A+VDMY KCG L  A+ +F+ I   D 
Sbjct: 484 LVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADT 543

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           +SWT +IAG+  HG   DA+  F  M Q G+EP+ V+F+ VL+ACSH GLV+EG ++F +
Sbjct: 544 VSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKL 603

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVK 644
           M+    + P++EHYAC+VDLLSR G+L++A  FI  MPV P+  +W +LL  CR+H  V+
Sbjct: 604 MKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVE 663

Query: 645 LAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIK 704
           L E  A+ +   + +N+  YVLL+N Y E+  +++   LR  +  +G+KK PGCSWI + 
Sbjct: 664 LGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVN 723

Query: 705 GKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
           G ++ F AG   HP   KI + L+ L+L++      P   Y L
Sbjct: 724 GTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLSYEL 766



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 187/428 (43%), Gaps = 83/428 (19%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  +   G  EKA+E+     ++ I  D  TYCS+    A LK L  GKKVH+   
Sbjct: 343 WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAI 402

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +SG+ ++   + + +   +  CG L++ R+VFN++++  +  W  L+  YS+   + +++
Sbjct: 403 KSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAI 462

Query: 184 YLFKKMQSLGIAADSYTFSCVLK-----CLAVVGNSRR---------------------- 216
            +F  M++ GIA + +TFS VL      CL   G                          
Sbjct: 463 EIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMY 522

Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                + DA K+F+ +S+ D VSW  +I+G+  +G+ +  L++F+ M+ LG   +  T +
Sbjct: 523 AKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFL 582

Query: 272 TVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            VL  C++ G +  G        K      E+     ++D+ S+ G L+ A+    +M  
Sbjct: 583 CVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRM-- 640

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG--- 387
                                            +EP+     ++L AC   G +E+G   
Sbjct: 641 --------------------------------PVEPNEMVWQTLLGACRVHGNVELGELA 668

Query: 388 -KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VSWNTMI 441
            + +  +  EN   S+ YV   L + Y + GS  D  S+ + M  + +      SW ++ 
Sbjct: 669 AQKILSFKAEN---SATYV--LLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVN 723

Query: 442 GALDLFVA 449
           G L  F A
Sbjct: 724 GTLHKFYA 731


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/703 (32%), Positives = 374/703 (53%), Gaps = 47/703 (6%)

Query: 92  SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG-VLGSKLVFMFVTCGDLKE 150
           S +  +    +L+ C D + L+  K VH  + +S        VL + +   +  C D+  
Sbjct: 64  SHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDA 123

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-CLA 209
             R+F+++     F W +L+   ++ G F +    F +MQS GI  D + +S +L+ C+ 
Sbjct: 124 ACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIG 183

Query: 210 V----VGNS---------------------------RRVKDAHKLFDELSDRDVVSWNCM 238
           +    +GN                            + ++D++K+F+ +++ +VVSWN M
Sbjct: 184 LDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAM 243

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           I+G+ +N +     ++F  M+  G   D  T + V         +   + V  +AL+   
Sbjct: 244 ITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGV 303

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEK--MGERSVVSWTSMIAGYAREGVFDGAIRLF 356
                    L+DM SKCG L  A  +F    +  R    W +MI+GY R G  + A+ LF
Sbjct: 304 DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELF 363

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVH-DYIKENDMQSSLYVSNALMDMYAK 415
             M +  I  D Y   S+ +A A    L +GK VH   IK     + + +SNA+ + YAK
Sbjct: 364 AKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAK 423

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACI 464
           CGS+ D   VFN+M  +D++SW +++ A          +++F  M  +   P+  T + +
Sbjct: 424 CGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSV 483

Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
           L +CA+L  LE G+++HG I + G+  D+ + +A+VDMY KCG L  A+ +F+ I   D 
Sbjct: 484 LVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADT 543

Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
           +SWT +IAG+  HG   DA+  F  M Q G+EP+ V+F+ VL+ACSH GLV+EG ++F +
Sbjct: 544 VSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKL 603

Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVK 644
           M+    + P++EHYAC+VDLLSR G+L++A  FI  MPV P+  +W +LL  CR+H  V+
Sbjct: 604 MKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVE 663

Query: 645 LAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIK 704
           L E  A+ +   + +N+  YVLL+N Y E+  +++   LR  +  +G+KK PGCSWI + 
Sbjct: 664 LGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVN 723

Query: 705 GKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
           G ++ F AG   HP   KI + L+ L+L++      P   Y L
Sbjct: 724 GTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLSYEL 766



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 187/428 (43%), Gaps = 83/428 (19%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           +NA I  +   G  EKA+E+     ++ I  D  TYCS+    A LK L  GKKVH+   
Sbjct: 343 WNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAI 402

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
           +SG+ ++   + + +   +  CG L++ R+VFN++++  +  W  L+  YS+   + +++
Sbjct: 403 KSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAI 462

Query: 184 YLFKKMQSLGIAADSYTFSCVLK-----CLAVVGNSRR---------------------- 216
            +F  M++ GIA + +TFS VL      CL   G                          
Sbjct: 463 EIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMY 522

Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                + DA K+F+ +S+ D VSW  +I+G+  +G+ +  L++F+ M+ LG   +  T +
Sbjct: 523 AKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFL 582

Query: 272 TVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
            VL  C++ G +  G        K      E+     ++D+ S+ G L+ A+    +M  
Sbjct: 583 CVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRM-- 640

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG--- 387
                                            +EP+     ++L AC   G +E+G   
Sbjct: 641 --------------------------------PVEPNEMVWQTLLGACRVHGNVELGELA 668

Query: 388 -KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VSWNTMI 441
            + +  +  EN   S+ YV   L + Y + GS  D  S+ + M  + +      SW ++ 
Sbjct: 669 AQKILSFKAEN---SATYV--LLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVN 723

Query: 442 GALDLFVA 449
           G L  F A
Sbjct: 724 GTLHKFYA 731


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/650 (34%), Positives = 341/650 (52%), Gaps = 50/650 (7%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ-SLGIAADSYT 200
            V  G L   RR+F+K+       W  L+  Y    +  E+L LFK M+   G+  D + 
Sbjct: 59  LVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFI 118

Query: 201 FSCVLKC--------------------------------LAVVGNSRRVKDAHKLFDELS 228
            S   K                                 L +   + ++ +  ++F E+ 
Sbjct: 119 LSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMP 178

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            R+VVSW  +I+G +  G  ++ L  F EM       D  T    L  CA+ GAL +GR 
Sbjct: 179 MRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGRE 238

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +HA A+K  F       NTL  MY+KCG L+  + +FEKM  R VVSWT++I    + G 
Sbjct: 239 IHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQ 298

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA 408
            + A++ F  M    + P+ Y   +++  CA    +E G+ +H  I    + +SL V N+
Sbjct: 299 EECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENS 358

Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPD 457
           +M MYAKCG +  +  +F++M  +DIVSW+T+I           A +L   M ++  +P 
Sbjct: 359 IMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPT 418

Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFD 517
              +A +L AC ++A LE G+++H Y+L  G+     V +A+++MY KCG +  A  +FD
Sbjct: 419 EFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFD 478

Query: 518 MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDE 577
                D++SWT MI GY  HG+  + I  F  + + G+ PD V+FI VL ACSH+GLVD 
Sbjct: 479 AAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDL 538

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           G+R+FN M  +  I P  EHY CM+DLL R G LS+A   IE MP   D  +W +LL  C
Sbjct: 539 GFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRAC 598

Query: 638 RIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPG 697
           R+H +V+   + AE + +LEP+  G ++ LAN+YA   KW E   +R+ +  +G+ K PG
Sbjct: 599 RVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPG 658

Query: 698 CSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRL--RLEM----KREGYFP 741
            SWI++K  V  FVAG  SHP  + I ++L  L  R E+    +  G+ P
Sbjct: 659 WSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLP 708



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 227/469 (48%), Gaps = 46/469 (9%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           G+ +H    ++G+V +   +GS L+ M+   G + EGRRVF+++    V  W  ++    
Sbjct: 135 GELLHGYAVKTGLV-NSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLV 193

Query: 175 KTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------- 221
           + G  KE+L  F +M    +  DSYTF+  LK  A  G     ++ H             
Sbjct: 194 RAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSF 253

Query: 222 -------------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                               LF+++S RDVVSW  +I+  +  G  E  ++ F  M    
Sbjct: 254 VANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESD 313

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
            + +  T   V+SGCAN   + +G  +HA  L    +  +S  N+++ MY+KCG L  + 
Sbjct: 314 VSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSS 373

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
            +F +M  R +VSW+++IAGY++ G    A  L   M  EG +P  +A+ S+L AC    
Sbjct: 374 VIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMA 433

Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
           +LE GK +H Y+    ++ +  V +AL++MY KCGS+ +A  +F+     DIVSW  MI 
Sbjct: 434 ILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMIN 493

Query: 443 A----------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERG-REIHGYILRHGIS 490
                      +DLF  + +    PD VT   +L AC+    ++ G R  +    ++ IS
Sbjct: 494 GYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQIS 553

Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHG 538
             +     ++D+  + G L  A  + + +P  +D + W+ ++    +HG
Sbjct: 554 PSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHG 602



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 175/345 (50%), Gaps = 16/345 (4%)

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREG 363
           +N  L    K G L  A R+F+KM ++  +SWT++I+GY        A+ LF+ M V  G
Sbjct: 52  SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111

Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
           +  D + ++    AC  +  +  G+ +H Y  +  + +S++V +AL+DMY K G + +  
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171

Query: 424 SVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLA 472
            VF++MP++++VSW  +I           AL  F  M ++  E D  T A  L ACA   
Sbjct: 172 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 231

Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
           AL  GREIH   ++ G      VAN +  MY KCG L    +LF+ +  +D++SWT +I 
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291

Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
                G    A+  F  MR++ + P+E +F +V+  C++   ++ G +   ++ +   + 
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH-LGLA 350

Query: 593 PKLEHYACMVDLLSRTGNL-SEAYRFIEMMPVAPDATIWGSLLCG 636
             L     ++ + ++ G L S +  F EM     D   W +++ G
Sbjct: 351 ASLSVENSIMTMYAKCGQLTSSSVIFHEM--TRRDIVSWSTIIAG 393



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 184/397 (46%), Gaps = 39/397 (9%)

Query: 85  VLYSSE--KSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVF 140
           ++Y SE  +S++  D+ T+   L+ CAD  +L  G+++H+   + G  +   V  + L  
Sbjct: 202 LVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFV-ANTLAT 260

Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT 200
           M+  CG L+ G  +F K+    V  W  ++    + G  + ++  F +M+   ++ + YT
Sbjct: 261 MYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYT 320

Query: 201 FSCVLKCLAVVGNSRRVKDAHKL--------------------------------FDELS 228
           F+ V+   A +      +  H L                                F E++
Sbjct: 321 FAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT 380

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
            RD+VSW+ +I+GY   G   +  E+   M   G       + +VLS C N   L  G+ 
Sbjct: 381 RRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440

Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
           +HA+ L           + L++MY KCG ++ A R+F+      +VSWT+MI GYA  G 
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGY 500

Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG-KDVHDYIKENDMQSSLYVSN 407
               I LF  + R G+ PD      +L AC+  GL+++G +  +   K+  +  S     
Sbjct: 501 SREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYG 560

Query: 408 ALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGA 443
            ++D+  + G ++DAE +   MP  +D V W+T++ A
Sbjct: 561 CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA 597



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 141/307 (45%), Gaps = 37/307 (12%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICESGI 127
           I    ++G  E A++      +S +     T+ +++  CA+L  +E G+++H++I   G+
Sbjct: 290 ITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGL 349

Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
                V  S ++ M+  CG L     +F+++    +  W+ ++  YS+ G+  E+  L  
Sbjct: 350 AASLSVENS-IMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLS 408

Query: 188 KMQSLGIAADSYTFSCVLKC---LAVVGNSRR---------------------------- 216
            M+  G     +  + VL     +A++ + ++                            
Sbjct: 409 WMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCG 468

Query: 217 -VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
            +++A ++FD   + D+VSW  MI+GY  +G + + +++F+++  +G   D  T + VLS
Sbjct: 469 SIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLS 528

Query: 276 GCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSV 333
            C++ G +  G R  +A + K   S        ++D+  + G L  A  + E M   R  
Sbjct: 529 ACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDD 588

Query: 334 VSWTSMI 340
           V W++++
Sbjct: 589 VVWSTLL 595



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 12/191 (6%)

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVA 449
           Q+ L  SN  +    K G + +A  +F++M  KD +SW T+I           AL LF  
Sbjct: 46  QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105

Query: 450 ML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
           M        D   ++    AC   + +  G  +HGY ++ G+     V +A++DMY K G
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165

Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
            +   R +F  +P ++++SWT +I G    G+  +A+  F++M ++ +E D  +F   L 
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225

Query: 568 ACSHSGLVDEG 578
           AC+ SG ++ G
Sbjct: 226 ACADSGALNYG 236



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 21/280 (7%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           +++  I  + + G++ +A E+L     E  K       S+L  C ++  LE GK++H+ +
Sbjct: 386 SWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYV 445

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
              G+     VL S L+ M+  CG ++E  R+F+  +N  +  W  +++ Y++ G  +E 
Sbjct: 446 LSIGLEHTAMVL-SALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREV 504

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNC 237
           + LF+K+  +G+  DS TF  VL   +  G    V    + F+ +S +  +S     + C
Sbjct: 505 IDLFEKIPRVGLRPDSVTFIGVLSACSHAG---LVDLGFRYFNAMSKKYQISPSKEHYGC 561

Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA- 296
           MI      G       + + M    F+ D     T+L  C   G +  GR      L+  
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAM---PFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLE 618

Query: 297 --CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
             C    I    TL ++Y+  G    A  + + M  + V+
Sbjct: 619 PNCAGTHI----TLANIYASKGKWREAADIRKLMKSKGVI 654



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 3/170 (1%)

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           C  L  LER  +     +      D   +N  +   VK G L  AR +FD +  KD ISW
Sbjct: 24  CIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISW 83

Query: 528 TIMIAGYGMHGFGCDAIATFNDMR-QAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           T +I+GY       +A+  F +MR ++G+  D         AC  +  V+ G    +   
Sbjct: 84  TTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYG-ELLHGYA 142

Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
            +  +   +   + ++D+ ++ G + E  R    MP+  +   W +++ G
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPM-RNVVSWTAIITG 191


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/588 (38%), Positives = 332/588 (56%), Gaps = 21/588 (3%)

Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
           ML  G + +  T    +  CA     + G+ +H    K     E     +L+ MY KC  
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 318 LDGAIRVFEK--MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           +D A ++F++     +  V + S+++GYA        + LF  M   G+E +   +  ++
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
             C   G L +G  VH +  +  +     V N L+ MY K G +     +F++MP K ++
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180

Query: 436 SWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYI 484
           +WN MI            L+L+  M  + F PD +T+  +L +CA L AL  G+E+   +
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
              G S++  + NA+V+MY +CG L  AR +FD +P K ++SWT +I GYGMHG G  A+
Sbjct: 241 EGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAV 300

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
             F++M + GI+PD  +F+SVL ACSH+GL ++G  +F +M  +  + P  EHY+CMVDL
Sbjct: 301 GLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDL 360

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
           L R G L+EA   IE M V  D  +WG+LL  C+IH  V+LAE   E V ELEP NTGYY
Sbjct: 361 LGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYY 420

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
           VLL+NVY EA   E + ++R  + +R LKK+PGCS++E KG+V++F AG  +HP   +I 
Sbjct: 421 VLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIY 480

Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEMEKEV--ALCGHSEKLAMAFGILNLPAGQTIR 782
             L  L   +K      K      N  E  +E   ++  HSEKLA+AF +LN      I 
Sbjct: 481 KKLNELENLVKDLDGCKK------NDHERREEYLNSMGVHSEKLAVAFALLNTRKETEII 534

Query: 783 VTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           + KNLR+CGDCH   K +SK   R+ V+RD+ RFHHFK+G CSC+ +W
Sbjct: 535 IIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 182/345 (52%), Gaps = 15/345 (4%)

Query: 208 LAVVGNSRRVKDAHKLFDE--LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
           +++ G    + +A KLFDE   S +  V +N ++SGY  N   +  + +F EM  LG  +
Sbjct: 52  ISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEI 111

Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
           +  TM+ ++  C   G L  G  VH F +K     + S  N LL MY K G++D   ++F
Sbjct: 112 NGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLF 171

Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
           ++M  + +++W +MI GYA+ G+ +  + L++ M  +G  PD   +  +L +CA  G L 
Sbjct: 172 DEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALS 231

Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--- 442
           +GK+V   ++     S+ +++NAL++MYA+CG++  A  +F+ MPVK +VSW  +IG   
Sbjct: 232 VGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYG 291

Query: 443 -------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADR 493
                  A+ LF  M++   +PDG     +L AC+      +G +  G + R +G+    
Sbjct: 292 MHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGA 351

Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMH 537
              + +VD+  + G L  AR L + +  + D   W  ++    +H
Sbjct: 352 EHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIH 396



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 38/275 (13%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           +I+  T   ++Q C    +L  G  VH    + G+ +D  V G+ L+ M+V  G++  GR
Sbjct: 110 EINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSV-GNCLLTMYVKSGEIDCGR 168

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           ++F+++    +  WN +++ Y++ G     L L+K+M+S G   D  T   VL   A +G
Sbjct: 169 KLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLG 228

Query: 213 --------------------------------NSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                               +K A  +FD +  + VVSW  +I 
Sbjct: 229 ALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIG 288

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL---KAC 297
           GY  +G  E  + +F EM+  G   D    V+VLS C++ G  +  + +  F +   K  
Sbjct: 289 GYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAG--LTNKGLDYFGVMERKYG 346

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
                   + ++D+  + G L+ A  + E M  R+
Sbjct: 347 LRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRA 381


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/581 (36%), Positives = 348/581 (59%), Gaps = 17/581 (2%)

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
           NVD + +  +++  + C ++ + RA+H   +K+         + L+  Y + G    A+ 
Sbjct: 36  NVD-SLVSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALE 94

Query: 324 VFEKMGERSVVSWTSMIAGYARE---GVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
           +F+++ ++ +VSW S+I+G++R    G+  G   LFR     G++P+   +  ++ ACA 
Sbjct: 95  LFDELPDKDLVSWNSLISGFSRRADLGICLGL--LFRMRFEMGLKPNEVTVIPVVSACAG 152

Query: 381 DGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTM 440
            G L++GK +H    ++ M   + V N+L+++Y KCG +  A  +F  M V+ +VSWN+M
Sbjct: 153 VGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSM 212

Query: 441 IG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGI 489
           +            +  F+ M +     D  T+  +L AC +L   +    +HGYIL  G+
Sbjct: 213 VAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGL 272

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
             +  +A A++D+Y K G L  +  +F  +   D ++WT M++ Y MHG G +AI  F  
Sbjct: 273 DGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFEL 332

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M + G+ PD V+F  +L ACSHSGLV+EG  +F +M     +E ++EHY+CMVDLL R+G
Sbjct: 333 MVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSG 392

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLAN 669
           +L++AY+ I+ MP+ P++ +WG+L+  CR+   ++L ++VAE +F L+P ++  Y+ L+N
Sbjct: 393 HLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSN 452

Query: 670 VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
           +Y+ A +W +  K+R  +  R L +NPGCS+IE   K++ FV G  SHP  ++I + L+ 
Sbjct: 453 MYSAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEE 512

Query: 730 LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
           L  + +  G+  KT Y L + DE  KE  +  HSEKLA+AFG+L   AG  + +TKN+R+
Sbjct: 513 LVRKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRI 572

Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           CGDCH  AK +S   +R I++RD+ RFHHF +G CSC  +W
Sbjct: 573 CGDCHGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 169/319 (52%), Gaps = 17/319 (5%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL---EVFKEMLNLGFNVDLATMVTV 273
            KDA +LFDEL D+D+VSWN +ISG+     A+ G+    +F+    +G   +  T++ V
Sbjct: 89  TKDALELFDELPDKDLVSWNSLISGFSRR--ADLGICLGLLFRMRFEMGLKPNEVTVIPV 146

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           +S CA  G L  G+ +H  A+K+    E+   N+L+++Y KCG L+ A  +FE M  +S+
Sbjct: 147 VSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSL 206

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           VSW SM+A +   G+ +  I  F  M R GI  D   + S+L AC   G+ ++ + VH Y
Sbjct: 207 VSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGY 266

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           I    +  +L ++ AL+D+YAK G+++D+  VF  M   D V+W  M+           A
Sbjct: 267 ILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREA 326

Query: 444 LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVD 501
           ++ F  M+ +   PD VT   +L AC+    +E G+     +   +G+       + +VD
Sbjct: 327 IEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVD 386

Query: 502 MYVKCGVLVLARSLFDMIP 520
           +  + G L  A  L   +P
Sbjct: 387 LLGRSGHLNDAYKLIKSMP 405



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 149/366 (40%), Gaps = 69/366 (18%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T   ++  CA +  L+ GK +H I  +SG++++  V+ S L+ ++  CG L+   
Sbjct: 137 KPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNS-LINLYGKCGCLEAAC 195

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYT-FSCVLKC---- 207
            +F  +    +  WN ++  +   G  ++ +  F  M+  GI +D  T  S +L C    
Sbjct: 196 CLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLG 255

Query: 208 ---------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                                      L +      + D+ K+F  + + D V+W  M+S
Sbjct: 256 VRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLS 315

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
            Y  +G   + +E F+ M+  G   D  T   +LS C++ G +  G+             
Sbjct: 316 SYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGK------------- 362

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
                N    MY   G             E  V  ++ M+    R G  + A +L + M 
Sbjct: 363 -----NYFKIMYEFYGV------------ELRVEHYSCMVDLLGRSGHLNDAYKLIKSM- 404

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSL-YVSNALMDMYAKCGSM 419
              +EP+     +++ AC   G +E+GK+V + +   D   S  Y++  L +MY+  G  
Sbjct: 405 --PMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYIT--LSNMYSAAGQW 460

Query: 420 ADAESV 425
            DA  V
Sbjct: 461 RDASKV 466


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 247/669 (36%), Positives = 364/669 (54%), Gaps = 33/669 (4%)

Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
           + +K+   G+ + +Y  + ++  LA  G+   + +A  +FD +  +++ SWN +IS Y  
Sbjct: 63  IHQKITRAGLGSSAYLNNLLVLMLAKHGS---LCEARSIFDAIQHKNIFSWNIIISAYAH 119

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC--FSKEI 302
            G     L +F +M          T  T LS C++ G L  GR +HA  +KA       +
Sbjct: 120 RGHPSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGREIHA-RIKASRGIRPSV 175

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG-VFDGAIRLFRGMVR 361
             +  +  MY+KCGDL  A  VF+++  ++VVSW ++IA YA+ G     A+ LF  M  
Sbjct: 176 ILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAE 235

Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ---SSLYVSNALMDMYAKCGS 418
            G+ P       +L AC     LE    +H  I E  +Q     + V NAL++MYAKCGS
Sbjct: 236 HGVRPCRATFVGVLGACNDVTSLE---KIHARIVETGLQFDVRDVGVQNALLNMYAKCGS 292

Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPA 467
           +  A  +F +M  +D VS N MI           ++ +F  M L+    D  T A ++ A
Sbjct: 293 LEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITA 352

Query: 468 CASLAALERGREIHGYIL-----RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
           C+   ALE G+ IH  ++     R     +  V  A+V MY KCG L  A+++F  +  K
Sbjct: 353 CSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTK 412

Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
           + +SW  M+A     G G +A A        G+E D  SFISVL ACSHSG+++  +  F
Sbjct: 413 NSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHF 472

Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
            +M  + ++ P  E+Y CMVDLL+R+G L +A   +  MP +PDA  W +LL GCR+   
Sbjct: 473 QLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGS 532

Query: 643 VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK-NPGCSWI 701
           ++ A   AE  F LEP NT  Y LL+++Y+   K +E+ +LR  +  RGL+K  PG S I
Sbjct: 533 LENAASAAEQAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVI 592

Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCG 761
           E+ G+V+ FVAG SSHP   KI   L  L +E+K+ G+ P T   + +    +KE  L  
Sbjct: 593 EVHGRVHEFVAGDSSHPQIDKILRELDILNVELKQAGFVPSTDGVVHDLKTEDKEEILAL 652

Query: 762 HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKD 821
           HSEKLA+AFG+++  +G  + V KNLRVC DCH   K +SK   R I +RD+NRFH F+ 
Sbjct: 653 HSEKLAVAFGLISTKSGIPLLVLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQS 712

Query: 822 GRCSCRGFW 830
           G CSC  +W
Sbjct: 713 GTCSCGDYW 721



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 250/542 (46%), Gaps = 70/542 (12%)

Query: 55  ISKTLVCKTKNYNAEIGR--FCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSL 112
           + K  + KTK       R   C   +  +  + L S E+ +I + ++ + ++ C D  S+
Sbjct: 2   LKKHTIWKTKKPTIATTRKNACSSSSSSRKHDPLDSLER-EIQSDSFAAAIRSCKDSNSV 60

Query: 113 EDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHE 172
                +H  I  +G+      L + LV M    G L E R +F+ I +  +F WN+++  
Sbjct: 61  S---IIHQKITRAGLG-SSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISA 116

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH----------- 221
           Y+  G+   +L+LF KM    +   + TF+  L   + +G+ +R ++ H           
Sbjct: 117 YAHRGHPSTALHLFAKMD---VPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRP 173

Query: 222 ----------------------KLFDELSDRDVVSWNCMISGYIANGVA-EKGLEVFKEM 258
                                  +FD +  ++VVSWN +I+ Y  +G +  + L++F++M
Sbjct: 174 SVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKM 233

Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFS---KEISFNNTLLDMYSKC 315
              G     AT V VL  C +  +L     +HA  ++       +++   N LL+MY+KC
Sbjct: 234 AEHGVRPCRATFVGVLGACNDVTSL---EKIHARIVETGLQFDVRDVGVQNALLNMYAKC 290

Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
           G L+ A  +F KM  R  VS   MIA +A++G+   +I++FR M  EG+  D     S++
Sbjct: 291 GSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVI 350

Query: 376 HACACDGLLEIGKDVHDYIKENDMQ-----SSLYVSNALMDMYAKCGSMADAESVFNQMP 430
            AC+C G LE GK +H  + E  +       ++ V  AL+ MY KCG++  A++VF  M 
Sbjct: 351 TACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMT 410

Query: 431 VKDIVSWNTMIGA-----------LDLFVAMLQNFEPDGVTMACILPACASLAALERGRE 479
            K+ VSWN M+ A             L  A  +  E D  +   +L AC+    LE   +
Sbjct: 411 TKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYD 470

Query: 480 IHGYILRHG--ISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGM 536
               +L     + A  N    +VD+  + G L  A  L + +P + D I+W  ++ G  +
Sbjct: 471 HFQLMLSDFDLVPAAENY-RCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRV 529

Query: 537 HG 538
            G
Sbjct: 530 QG 531


>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/622 (36%), Positives = 344/622 (55%), Gaps = 46/622 (7%)

Query: 253 EVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
           E F+   LN+  N  L T    +  C    +L  G+ +H   + + FS +    N L+ M
Sbjct: 31  EAFQRFRLNIFTNTSLFT--PFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSM 88

Query: 312 YSKCGDLDGAI-------------------------------RVFEKMGERSVVSWTSMI 340
           YSK GD   A+                               +VF++M +R + +W +MI
Sbjct: 89  YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 148

Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
           AG  +    +  + LFR M   G  PD Y + S+    A    + IG+ +H Y  +  ++
Sbjct: 149 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 208

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM 450
             L V+++L  MY + G + D E V   MPV+++V+WNT+I            L L+  M
Sbjct: 209 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 268

Query: 451 -LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
            +    P+ +T   +L +C+ LA   +G++IH   ++ G S+   V ++++ MY KCG L
Sbjct: 269 KISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCL 328

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYA 568
             A   F     +D + W+ MI+ YG HG G +AI  FN M  Q  +E +EV+F+++LYA
Sbjct: 329 GDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYA 388

Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
           CSHSGL D+G   F+MM  +   +P L+HY C+VDLL R G L +A   I  MP+  D  
Sbjct: 389 CSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIV 448

Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKIS 688
           IW +LL  C IH   ++A++V + + +++P+++  YVLLANV+A A++W +V ++R+ + 
Sbjct: 449 IWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMR 508

Query: 689 RRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALI 748
            + +KK  G SW E KG+V+ F  G  S   +K+I S LK L LEMK +GY P T   L 
Sbjct: 509 DKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLH 568

Query: 749 NADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREI 808
           + DE EKE  L  HSEKLA+AF ++ LP G  IR+ KNLRVC DCH   K++S    REI
Sbjct: 569 DMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREI 628

Query: 809 VLRDSNRFHHFKDGRCSCRGFW 830
            LRD +RFHHF +G+CSC  +W
Sbjct: 629 TLRDGSRFHHFINGKCSCGDYW 650



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 247/531 (46%), Gaps = 60/531 (11%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVI 129
           I   C  GNL +A +    +  +  +T  +   +Q C   +SL  GK++H ++  SG   
Sbjct: 20  IATLCSKGNLREAFQRFRLNIFT--NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSS 77

Query: 130 DDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
           D                                 FI N LM  YSK G+F  ++ ++ +M
Sbjct: 78  DK--------------------------------FICNHLMSMYSKLGDFPSAVAVYGRM 105

Query: 190 QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAE 249
           +     + +   +  ++   +V       +A K+FDE+ DR + +WN MI+G I     E
Sbjct: 106 RKKNYMSSNILINGYVRAGDLV-------NARKVFDEMPDRKLTTWNAMIAGLIQFEFNE 158

Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLL 309
           +GL +F+EM  LGF+ D  T+ +V SG A   ++  G+ +H + +K     ++  N++L 
Sbjct: 159 EGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLA 218

Query: 310 DMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVY 369
            MY + G L     V   M  R++V+W ++I G A+ G  +  + L++ M   G  P+  
Sbjct: 219 HMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKI 278

Query: 370 AITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
              ++L +C+   +   G+ +H    +    S + V ++L+ MY+KCG + DA   F++ 
Sbjct: 279 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 338

Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQ--NFEPDGVTMACILPACASLAALERG 477
             +D V W++MI           A++LF  M +  N E + V    +L AC+     ++G
Sbjct: 339 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 398

Query: 478 REIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYG 535
            E+   ++ ++G          +VD+  + G L  A ++   +P K D++ W  +++   
Sbjct: 399 LELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACN 458

Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
           +H     A   F ++ Q  I+P++ S   VL A  H+    + WR  + +R
Sbjct: 459 IHKNAEMAQRVFKEILQ--IDPND-SACYVLLANVHASA--KRWRDVSEVR 504


>gi|147852318|emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]
          Length = 734

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/623 (37%), Positives = 347/623 (55%), Gaps = 41/623 (6%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
            H+LFDE+   +  +WN +I  ++ NG + + +  +++ML  G   D  T+  +L+   +
Sbjct: 141 THQLFDEIPVSNTFAWNNLIQTHLTNGDSGRVVSTYRQMLLRGVRPDKHTIPRILTAARH 200

Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSM 339
             +  FG+ VH  ALK   S E    + LL+MY +    B A  VF K   R+ VSWT +
Sbjct: 201 TSSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGABAAKLVFCKSARRNSVSWTLI 260

Query: 340 IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
              Y  E     A+ +F+ MV    E D  A+ + + AC     L  G            
Sbjct: 261 SRLYIMEDKPGLAVDMFKQMVESKSEIDPLALVTAIVACGMLKSLPGG------------ 308

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVA 449
                      +MY  CGS+ DA +VF++MP KD++SW  +             L LF  
Sbjct: 309 -----------EMYIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQ 357

Query: 450 M-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGV 508
           M ++  +PD + ++ ILPAC   AA ++G+EIH Y+LR+GI  +  V NA++DMYVK G 
Sbjct: 358 MSMEGVKPDSLAISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGF 417

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLY 567
           +  A  +F  +  +D ISWT+MI GY +HG G   +  F  M + + +E D++++ + L+
Sbjct: 418 IESAAKIFAGMKDRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALH 477

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           AC+ + LV++G  +FN     C   PK  HYA MV LLSR G   EA  F+E   +    
Sbjct: 478 ACTTARLVEQGRFYFN-----CITAPKSRHYALMVALLSRVGLFDEARVFMEEHKLEGHV 532

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            +  +LL GCRIHH ++ A++V E + +L+  N   YVLL+N Y+   KW+ V +LRE I
Sbjct: 533 EVLRALLDGCRIHHNMRTAKRVIEQLCDLQTLNADNYVLLSNWYSSFAKWDMVNELRETI 592

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
              GLK     SWIE + K+++F  G  SHP ++KI   L  L  +++ EG      ++L
Sbjct: 593 RDMGLKPRKAYSWIEFRNKIHVFGTGDVSHPRSEKIYWELHSLMKKIEEEGTRLNLDFSL 652

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
            + DE E+E    GHSE LA +FG+++  AG TIRVTKNLR+CG+CH+ AK +SK   RE
Sbjct: 653 HDVDE-ERECVPIGHSELLATSFGLISTQAGATIRVTKNLRMCGNCHDSAKAISKIVERE 711

Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
           I+++D + FHHFKDG CSC  FW
Sbjct: 712 IIIKDPSCFHHFKDGFCSCGDFW 734



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 141/306 (46%), Gaps = 11/306 (3%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T   IL       S   GK+VH    + G+  +  V+ S L+ M+         +
Sbjct: 185 RPDKHTIPRILTAARHTSSFSFGKQVHGHALKLGLSSESYVI-SALLEMYGRLDGABAAK 243

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-----SC-VLK 206
            VF K        W L+   Y        ++ +FK+M       D         +C +LK
Sbjct: 244 LVFCKSARRNSVSWTLISRLYIMEDKPGLAVDMFKQMVESKSEIDPLALVTAIVACGMLK 303

Query: 207 CLA---VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF 263
            L    +  +   +KDA  +FD +  +DV+SW  +  GY+ NG   +GL++F++M   G 
Sbjct: 304 SLPGGEMYIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEGV 363

Query: 264 NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIR 323
             D   + ++L  C    A   G+ +HA+ L+      ++  N +LDMY K G ++ A +
Sbjct: 364 KPDSLAISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAK 423

Query: 324 VFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDG 382
           +F  M +R  +SWT MI GY+  G  +  + LFR M +   +E D  A  + LHAC    
Sbjct: 424 IFAGMKDRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTAR 483

Query: 383 LLEIGK 388
           L+E G+
Sbjct: 484 LVEQGR 489



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 163/364 (44%), Gaps = 40/364 (10%)

Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
           A   K  S   + + M  K  D     ++F+++   +  +W ++I  +   G     +  
Sbjct: 116 ATHCKNPSNLRSXVRMSQKSIDFGLTHQLFDEIPVSNTFAWNNLIQTHLTNGDSGRVVST 175

Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
           +R M+  G+ PD + I  IL A         GK VH +  +  + S  YV +AL++MY +
Sbjct: 176 YRQMLLRGVRPDKHTIPRILTAARHTSSFSFGKQVHGHALKLGLSSESYVISALLEMYGR 235

Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG-----------ALDLFVAMLQN-FEPDGVTMAC 463
                 A+ VF +   ++ VSW T+I            A+D+F  M+++  E D + +  
Sbjct: 236 LDGABAAKLVFCKSARRNSVSW-TLISRLYIMEDKPGLAVDMFKQMVESKSEIDPLALVT 294

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
            + AC  L +L  G                       +MY+ CG +  AR++FD +P+KD
Sbjct: 295 AIVACGMLKSLPGG-----------------------EMYIDCGSIKDARAVFDRMPSKD 331

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           +ISWT +  GY  +G   + +  F  M   G++PD ++  S+L AC       +G     
Sbjct: 332 VISWTEIFRGYVKNGGFNEGLKLFRQMSMEGVKPDSLAISSILPACGRGAAHKQGKEIHA 391

Query: 584 -MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
            ++R   ++   +++   ++D+  ++G +  A +    M    DA  W  ++ G  +H +
Sbjct: 392 YLLRNGIDLNVTVQN--AVLDMYVKSGFIESAAKIFAGMK-DRDAISWTVMILGYSLHGQ 448

Query: 643 VKLA 646
            +L 
Sbjct: 449 GELG 452



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 102/268 (38%), Gaps = 62/268 (23%)

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           KS+ID     + +  C  LKSL  G+                        M++ CG +K+
Sbjct: 284 KSEIDPLALVTAIVACGMLKSLPGGE------------------------MYIDCGSIKD 319

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
            R VF+++ +  V  W  +   Y K G F E L LF++M   G+  DS   S +L     
Sbjct: 320 ARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEGVKPDSLAISSILPACGR 379

Query: 211 VGNSRRVKDAH--------------------------------KLFDELSDRDVVSWNCM 238
               ++ K+ H                                K+F  + DRD +SW  M
Sbjct: 380 GAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIFAGMKDRDAISWTVM 439

Query: 239 ISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
           I GY  +G  E G+++F++M  N    +D       L  C     +  GR    F     
Sbjct: 440 ILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVEQGR----FYFNCI 495

Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVF 325
            + +      ++ + S+ G  D A RVF
Sbjct: 496 TAPKSRHYALMVALLSRVGLFDEA-RVF 522



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 1/103 (0%)

Query: 88  SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           S E  K D+    SIL  C    + + GK++H+ +  +GI ++  V  + L  M+V  G 
Sbjct: 359 SMEGVKPDSLAISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLD-MYVKSGF 417

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
           ++   ++F  + +     W +++  YS  G  +  + LF+KM+
Sbjct: 418 IESAAKIFAGMKDRDAISWTVMILGYSLHGQGELGVDLFRKME 460


>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera]
          Length = 564

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/531 (40%), Positives = 321/531 (60%), Gaps = 14/531 (2%)

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR-EGVFDGAIRLFRGMVREGI-EPDVYA 370
           S  GD+D A ++F ++   ++ SW SMI G ++ +      + LFR MVR G   P+ + 
Sbjct: 35  SPYGDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFT 94

Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
           +  +L AC+    LE G+ VH  + ++   SS +V  AL++ YAKC  +  A  VF+++ 
Sbjct: 95  MAFVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEIT 154

Query: 431 VKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGRE 479
            +++V+W+TMI           AL LF  M +    PD VTM  ++ ACA+  AL+ G+ 
Sbjct: 155 DRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKW 214

Query: 480 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 539
           +H YI +  I  D  ++ A+V+MY KCG +  A+ +FD +P KD  +W+ MI G  ++G 
Sbjct: 215 VHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGL 274

Query: 540 GCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA 599
             DA+  F  M +A ++P+ V+FI VL AC+HSGLV EG R+++ M  E  I P +E Y 
Sbjct: 275 AEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSM-LEFGIVPSMELYG 333

Query: 600 CMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPD 659
           CMVDLL R   + +A   +E MP++P+  IW +LL GC+    +  +E VA+ + ELEP 
Sbjct: 334 CMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPH 393

Query: 660 NTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
           N   Y+LL+N+YA   +WE++ ++R+K+   G+K  PGCS IE+ G V+ FV G  SHP 
Sbjct: 394 NAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPE 453

Query: 720 AKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQ 779
           A ++  +L+ +   +   G+ P     L N  + EKE ALC HSE+LA+A+G+L      
Sbjct: 454 AMEVREILRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPM 513

Query: 780 TIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            IR+ KNLRVCGDCHE+ K +S   RREI++RD  RFH F +G CSCR FW
Sbjct: 514 AIRIVKNLRVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVNGSCSCRDFW 564



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 184/328 (56%), Gaps = 14/328 (4%)

Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEK-GLEVFKEMLNLGF-NVDLATMVTVLSGC 277
           A KLF ++   ++ SWN MI G   +    K  + +F++M+  G+ N +  TM  VL  C
Sbjct: 43  ARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKAC 102

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           +   AL  G+ VHA  LK+ F         L++ Y+KC D+  A +VF+++ +R++V+W+
Sbjct: 103 SIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWS 162

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           +MI+GYAR G+ + A+ LFR M + G+ PD   + S++ ACA  G L+ GK VH YI + 
Sbjct: 163 TMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQ 222

Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLF 447
            +++ L +S AL++MYAKCG +  A+ VF+ MPVKD  +W++MI           AL+ F
Sbjct: 223 LIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEF 282

Query: 448 VAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
             M +   +P+ VT   +L ACA    +  GR     +L  GI     +   +VD+  + 
Sbjct: 283 FRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYGCMVDLLCRA 342

Query: 507 GVLVLARSLFDMIP-AKDLISWTIMIAG 533
            ++  A +L + +P + + + W  ++ G
Sbjct: 343 SLVEDACTLVETMPISPNPVIWRTLLVG 370



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 169/331 (51%), Gaps = 35/331 (10%)

Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN-FKESLYLFKKMQSLGIA-ADSYTFSC 203
           GD+   R++F++I    +F WN ++   S++    KE + LF+KM   G    +++T + 
Sbjct: 38  GDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAF 97

Query: 204 VLKCLAVV------------------GNSRRVKD--------------AHKLFDELSDRD 231
           VLK  ++V                  G+S  V+               A K+FDE++DR+
Sbjct: 98  VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN 157

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 291
           +V+W+ MISGY   G+  + L +F++M   G   D  TMV+V+S CA  GAL  G+ VHA
Sbjct: 158 LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHA 217

Query: 292 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 351
           +  K     ++  +  L++MY+KCG ++ A  VF+ M  +   +W+SMI G A  G+ + 
Sbjct: 218 YINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAED 277

Query: 352 AIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
           A+  F  M    ++P+      +L ACA  GL+  G+     + E  +  S+ +   ++D
Sbjct: 278 ALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYGCMVD 337

Query: 412 MYAKCGSMADAESVFNQMPV-KDIVSWNTMI 441
           +  +   + DA ++   MP+  + V W T++
Sbjct: 338 LLCRASLVEDACTLVETMPISPNPVIWRTLL 368



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 34/289 (11%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           +T T   +L+ C+ + +LE+G++VH+ + +SG       + + LV  +  C D+    +V
Sbjct: 91  NTFTMAFVLKACSIVSALEEGQQVHANVLKSGFG-SSPFVETALVNFYAKCEDIVLASKV 149

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG-- 212
           F++I +  +  W+ ++  Y++ G   E+L LF+ MQ  G+  D  T   V+   A  G  
Sbjct: 150 FDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGAL 209

Query: 213 ----------NSRRVKD--------------------AHKLFDELSDRDVVSWNCMISGY 242
                     N + ++                     A ++FD +  +D  +W+ MI G 
Sbjct: 210 DTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGL 269

Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
             NG+AE  LE F  M       +  T + VLS CA+ G +  GR   +  L+      +
Sbjct: 270 AINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSM 329

Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFD 350
                ++D+  +   ++ A  + E M    + V W +++ G  +    D
Sbjct: 330 ELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLD 378



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 74/156 (47%), Gaps = 6/156 (3%)

Query: 66  YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
           ++  I  +  +G + +A+ +    +K+ +  D  T  S++  CA   +L+ GK VH+ I 
Sbjct: 161 WSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYI- 219

Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
              ++  D  L + LV M+  CG ++  + VF+ +       W+ ++   +  G  +++L
Sbjct: 220 NKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDAL 279

Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLA---VVGNSRR 216
             F +M+   +  +  TF  VL   A   +V   RR
Sbjct: 280 EEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRR 315


>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
 gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
          Length = 601

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/605 (35%), Positives = 346/605 (57%), Gaps = 17/605 (2%)

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA--LMFGRAVHAFALKA 296
           +  Y  N + +K L++FK+ +N     + AT VTVL  CA+ G   L  G+ +H  A+  
Sbjct: 1   MGAYQENDLHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQ 60

Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            F  ++   N+L+ MY+KCG    A  VF+KM  ++++S+TSMI  Y        A  L+
Sbjct: 61  GFGTDLVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYELY 120

Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
           + M+ EGI PD+YA  + L  C     +  G+ +H  +  ++ ++ +  SNAL+ MY + 
Sbjct: 121 KKMLSEGIMPDIYAYAAALAVCPT---IREGEAIHVKLGNHERRTPV-CSNALVGMYGRF 176

Query: 417 GSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACIL 465
           G +A A+ VF+ +  KD+ S+N MI           A+ L++ M  +N EP+  T   +L
Sbjct: 177 GRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVL 236

Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
            AC+ L AL  G+EIH  +       D     A+V+MY KCG    AR++F+    K++ 
Sbjct: 237 DACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKNVF 296

Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
           +WT +++ Y   G     +  +  M   G+ PD+V+F ++  ACSHSGL DEG  +F  M
Sbjct: 297 TWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAM 356

Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL 645
           R +  I P   HY CM+DLL R G L EA   +  MP +PD   W  LL  C+++ ++K+
Sbjct: 357 REDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKI 416

Query: 646 AEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKG 705
             +  + + EL P ++G Y+L+ N+YA+A KW +V ++++ I +RGL K PG S IE + 
Sbjct: 417 GARAYKRITELNPPDSGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQR 476

Query: 706 KVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEK 765
           +++ FV G ++HP  ++I + L+ +  ++   GY P T+  L++ +E  K   L  HSE+
Sbjct: 477 RIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSER 536

Query: 766 LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCS 825
           +A+  G+L   AG T+ + KNLR+C DCH   K +SK   R++++RDS+RFH F+ G CS
Sbjct: 537 MALGLGLLTSDAGATLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCS 596

Query: 826 CRGFW 830
           C  +W
Sbjct: 597 CGDYW 601



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 192/412 (46%), Gaps = 35/412 (8%)

Query: 70  IGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKS--LEDGKKVHSIICES 125
           +G + E    +KA+++   S  E+ + +  TY ++L+ CA L    LEDGK++H      
Sbjct: 1   MGAYQENDLHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQ 60

Query: 126 GIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYL 185
           G   D  V+ + L+ M+  CG  K    VF+K++   +  +  ++  Y+ T    E+  L
Sbjct: 61  GFGTD-LVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYEL 119

Query: 186 FKKMQSLGIAADSYTFSCVLKCLAVV----------------------------GNSRRV 217
           +KKM S GI  D Y ++  L     +                            G   R+
Sbjct: 120 YKKMLSEGIMPDIYAYAAALAVCPTIREGEAIHVKLGNHERRTPVCSNALVGMYGRFGRI 179

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
             A  +FD +  +D+ S+N MI+ +       K + ++ EM       +L T  +VL  C
Sbjct: 180 ASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVLDAC 239

Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           +  GAL  G+ +H          ++++N  L++MY+KCG    A  VF   G ++V +WT
Sbjct: 240 SKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKNVFTWT 299

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
           S+++ Y++ G     +  ++ M  EG+ PD    T+I +AC+  GL + G      ++E+
Sbjct: 300 SLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMRED 359

Query: 398 DMQSSLYVS-NALMDMYAKCGSMADAESVFNQMPV-KDIVSWNTMIGALDLF 447
                L      ++D+  + G + +AE +   MP   D+V+W  ++ A  ++
Sbjct: 360 HWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVY 411



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 16/230 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
           +YN  I  F +  +  KA+ +    E   ++    TY S+L  C+ L +L +GK++H  +
Sbjct: 196 SYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVLDACSKLGALTEGKEIHKKV 255

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G    D    + LV M+  CG   E R VFN      VF W  LM  YS+ G  +  
Sbjct: 256 -KGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYR 314

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRD------VVSWN 236
           L  +++M   G+  D  TF+ +    +  G    + D   L+      D         + 
Sbjct: 315 LEAYQRMNCEGVIPDDVTFTAIFNACSHSG----LPDEGLLYFRAMREDHWIVPLQPHYT 370

Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
           CMI      G   +  E+ + M    ++ D+ T   +LS C   G L  G
Sbjct: 371 CMIDLLGRVGRLREAEELVRTM---PYSPDVVTWTILLSACKVYGDLKIG 417


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/756 (31%), Positives = 398/756 (52%), Gaps = 53/756 (7%)

Query: 77  GNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
           G LE+ +       +  +  +   + +++ LC  L++   G +V S +  SG+     V 
Sbjct: 124 GYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVA 183

Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
            S L+ MF   G +++  ++F++++       N ++  YS  G   +   +F  M+  G+
Sbjct: 184 NS-LITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGL 242

Query: 195 AADSYTFSCVLKCLAVVGN--------------------------------SRRVKDAHK 222
             D+ T   ++   A   +                                + ++ DA  
Sbjct: 243 RPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 302

Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           LF  +S RD++SWN MIS Y+ N  +   L+   ++ +     +  T  + L  C++ GA
Sbjct: 303 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGA 362

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L+ G+ VHA  L+    + +   N+L+ MY KC  ++ A +VF+ M    VVS+  +I G
Sbjct: 363 LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGG 422

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA-CACDGLLEIGKDVHDYIKENDMQS 401
           YA       A+++F  +   GI+P+   + +I  +  + + L   G+ +H YI      S
Sbjct: 423 YAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLS 482

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
             YV+N+L+ MYAKCG++  + ++FN +  K+IVSWN +I           AL LF+ M 
Sbjct: 483 DEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQ 542

Query: 452 Q-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
               + D V +A  L +CASLA+LE G ++HG  ++ G+ +D  V NA +DMY KCG + 
Sbjct: 543 HAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKM- 601

Query: 511 LARSLFDMIPAKDLIS---WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
               +  M+P + +     W  +I+GY  +G+  +A  TF  M   G +PD V+F+++L 
Sbjct: 602 --NEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLS 659

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
           ACSH+GLVD+G  ++N M     + P ++H  C+VDLL R G  +EA RFIE MPV P+ 
Sbjct: 660 ACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPND 719

Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
            IW SLL   R H  +++  K A+ + EL+P +   YVLL+N+YA   +W +V KLR  +
Sbjct: 720 LIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHM 779

Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
               + K P CSW+++K +V+ F  G   H HA+KI + L  + L+++  GY   T  AL
Sbjct: 780 KTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSAL 839

Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRV 783
            + DE +KE  L  HSEKLA+A+G++ +P G T ++
Sbjct: 840 HDTDEEQKEQNLWNHSEKLALAYGLIVVPEGSTCQM 875



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 194/369 (52%), Gaps = 11/369 (2%)

Query: 208 LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
           L + G+   V DA +LF E+ +R+VVSW  ++    +NG  E+ L  +++M   G   + 
Sbjct: 86  LHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNA 145

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
               TV+S C +    + G  V +  + +    ++S  N+L+ M+   G +  A ++F++
Sbjct: 146 NAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDR 205

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 387
           M E   +S  +MI+ Y+ +G+      +F  M   G+ PD   + S++  CA       G
Sbjct: 206 MEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHG 265

Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
             +H     + + SS+ V NAL++MY+  G ++DAE +F  M  +D++SWNTMI      
Sbjct: 266 SGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQN 325

Query: 442 -GALDLFVAMLQNFE----PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
             + D    + Q F     P+ +T +  L AC+S  AL  G+ +H  +L+  +  +  V 
Sbjct: 326 CNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVG 385

Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIE 556
           N+++ MY KC  +  A  +F  +P  D++S+ ++I GY +   G  A+  F+ +R AGI+
Sbjct: 386 NSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIK 445

Query: 557 PDEVSFISV 565
           P+ ++ I++
Sbjct: 446 PNYITMINI 454



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 193/414 (46%), Gaps = 21/414 (5%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG---AL 283
           + DR   +W   +SG +  G      E+ + M   G  +    + ++++ C   G    +
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 284 MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
             G A+HA   +A     +     LL +Y   G +  A R+F +M ER+VVSWT+++   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVAL 120

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE---IGKDVHDYIKENDMQ 400
           +  G  +  +R +R M REG+  +  A  +++  C   G LE    G  V  ++  + +Q
Sbjct: 121 SSNGYLEETLRAYRQMRREGVPCNANAFATVVSLC---GSLENEVPGLQVASHVIVSGLQ 177

Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD----------LFVAM 450
           + + V+N+L+ M+   G + DAE +F++M   D +S N MI              +F  M
Sbjct: 178 NQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDM 237

Query: 451 LQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
             +   PD  T+  ++  CAS      G  IH   LR  + +   V NA+V+MY   G L
Sbjct: 238 RHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297

Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
             A  LF  +  +DLISW  MI+ Y  +    DA+ T   +      P+ ++F S L AC
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGAC 357

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           S  G + +G +  + +  + +++  L     ++ +  +  ++ +A +  + MP 
Sbjct: 358 SSPGALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT 410



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 132/304 (43%), Gaps = 45/304 (14%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLED----GKKVHS 120
           +YN  IG +  + +  KAM+V +S  +S      Y +++ +     S  D    G+ +H+
Sbjct: 415 SYNVLIGGYAVLEDGTKAMQV-FSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHA 473

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            I  +G + D+ V  S L+ M+  CG+L+    +FN I N  +  WN ++   ++ G+ +
Sbjct: 474 YIIRTGFLSDEYVANS-LITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGE 532

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLA------------------------------- 209
           E+L LF  MQ  G   D     C+ +CL+                               
Sbjct: 533 EALKLFIDMQHAGNKLDRV---CLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVN 589

Query: 210 ----VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
               + G   ++ +  ++  + + R    WN +ISGY   G  ++  E FK+M+ +G   
Sbjct: 590 AAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKP 649

Query: 266 DLATMVTVLSGCANCGALMFG-RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
           D  T V +LS C++ G +  G    ++ A     S  I     ++D+  + G    A R 
Sbjct: 650 DYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERF 709

Query: 325 FEKM 328
            E+M
Sbjct: 710 IEEM 713


>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
          Length = 674

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/506 (42%), Positives = 308/506 (60%), Gaps = 18/506 (3%)

Query: 342 GYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG--KDVHDYIKENDM 399
           GY R  +   ++ LFR M+       V    +++   A   + + G    +H  I +   
Sbjct: 170 GYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGF 229

Query: 400 QSSLYVSNALMDMYAKCGS--MADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
           + +  V N ++D YAK GS  +  A  VF+ M  +D+VSWN+MI           A+ L+
Sbjct: 230 ERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLY 288

Query: 448 VAMLQ---NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
             ML      + + V ++ +L ACA   A++ G+ IH  ++R G+  +  V  +IVDMY 
Sbjct: 289 SKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYS 348

Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
           KCG + +A   F  I  K+++SW+ MI GYGMHG G +A+  F +M+++G+ P+ ++FIS
Sbjct: 349 KCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFIS 408

Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
           VL ACSH+GL+DEG  ++N M+ E  IE  +EHY CMVDLL R G L EAY  I+ M V 
Sbjct: 409 VLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVK 468

Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
           PDA IWG+LL  CRIH  V+LAE   + +FEL+  N+GYYVLL+N+YAEA  W++V+++R
Sbjct: 469 PDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIR 528

Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
             +  R ++K PG S  E+KGK+ +F  G  SHP   +I S L++L   M+  GY P T 
Sbjct: 529 LLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTG 588

Query: 745 YALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTA 804
             L + DE EKE AL  HSEKLA+AF ++N      I + KNLRVC DCH   KF++K  
Sbjct: 589 SVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKIT 648

Query: 805 RREIVLRDSNRFHHFKDGRCSCRGFW 830
            REI++RD  RFHHFKDG CSCR +W
Sbjct: 649 EREIIIRDLQRFHHFKDGLCSCRDYW 674



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 138/236 (58%), Gaps = 5/236 (2%)

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLAT 269
           G SR ++ A K+FD + +RDVVSWN MI+ Y  NG++ + + ++ +MLN+G  +  +   
Sbjct: 246 GGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVA 304

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
           +  VL  CA+ GA+  G+ +H   ++    + +    +++DMYSKCG ++ A R F K+ 
Sbjct: 305 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 364

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           E++++SW++MI GY   G    A+ +F  M R G+ P+     S+L AC+  GLL+ G+ 
Sbjct: 365 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRY 424

Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
            ++ +K+   +++ +     ++D+  + G + +A S+  +M VK D   W  ++ A
Sbjct: 425 WYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 480



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 163/316 (51%), Gaps = 20/316 (6%)

Query: 241 GYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           GY+ N +    LE+F+ M+  +    VD A  +   S  A         ++HA   K  F
Sbjct: 170 GYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGF 229

Query: 299 SKEISFNNTLLDMYSKCG--DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
            +     NT+LD Y+K G  DL+ A +VF+ M ER VVSW SMIA YA+ G+   AI L+
Sbjct: 230 ERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLY 288

Query: 357 RGM--VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
             M  V  GI+ +  A++++L ACA  G ++ GK +H+ +    ++ ++YV  +++DMY+
Sbjct: 289 SKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYS 348

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMAC 463
           KCG +  A   F ++  K+I+SW+ MI           AL++F  M ++   P+ +T   
Sbjct: 349 KCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFIS 408

Query: 464 ILPACASLAALERGREIHGYILRH-GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
           +L AC+    L+ GR  +  + +  GI A       +VD+  + G L  A SL   +  K
Sbjct: 409 VLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVK 468

Query: 523 -DLISWTIMIAGYGMH 537
            D   W  +++   +H
Sbjct: 469 PDAAIWGALLSACRIH 484



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 10/189 (5%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +     ++L  CA   +++ GK++H+ +   G+  ++  +G+ +V M+  CG ++   
Sbjct: 299 KCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLE-ENVYVGTSIVDMYSKCGRVEMAS 357

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           R F KI    +  W+ ++  Y   G  +E+L +F +M+  G+  +  TF  VL   +  G
Sbjct: 358 RAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAG 417

Query: 213 ---NSRRVKDAHKLFDELS-DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                R   +A K   E   +  V  + CM+      G  ++   + KEM       D A
Sbjct: 418 LLDEGRYWYNAMK--QEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEM---KVKPDAA 472

Query: 269 TMVTVLSGC 277
               +LS C
Sbjct: 473 IWGALLSAC 481


>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/575 (37%), Positives = 336/575 (58%), Gaps = 16/575 (2%)

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           A +  +L    +C ++   R +HA   K+   ++    + L+  Y+K G  + A+++F+ 
Sbjct: 40  AIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDD 99

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEI 386
           M  + +VSW S+I+G++R      ++  F  M  E  ++P+   I S++   AC+G L+ 
Sbjct: 100 MPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVKPNEVTILSMI--SACNGALDA 155

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA--- 443
           GK +H +  +      + V+N+L++MY K G +  A  +F  +P  + VSWN++I A   
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVT 215

Query: 444 -------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                  +D F  M +   E D  T+  +L AC  L   +    IHG +   G  A   +
Sbjct: 216 NGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITI 275

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
           A A++D Y K G L  +  +F  +   D ++WT M+AGY  HG G +AI  F  M   G+
Sbjct: 276 ATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGL 335

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           EPD V+F  +L ACSHSGLV+EG  +FN+M     IEP+++HY+CMVDLL R G L++AY
Sbjct: 336 EPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAY 395

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
             I+ MP+ P+A +WG+LL  CR+H  ++L ++VAEH+  +EP +   Y++L+N+Y+ + 
Sbjct: 396 EVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASR 455

Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
            W++  K+R  +  RGLK+ PG S IE   K + F  G  SHP  +KI S L+ L  +++
Sbjct: 456 SWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIR 515

Query: 736 REGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHE 795
           + GY  KT Y L + +E  KE  +  HSEKLA+AFG+L    G+ + +TKNLR+CGDCH 
Sbjct: 516 KAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHS 575

Query: 796 MAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            AK +S   +R I++RD  RFHHF DG CSC  +W
Sbjct: 576 TAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 183/372 (49%), Gaps = 23/372 (6%)

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSG 276
           +DA KLFD++  +D+VSWN +ISG+  +      L  F  M   +    +  T+++++S 
Sbjct: 91  EDALKLFDDMPHKDLVSWNSLISGF--SRCLHMSLTAFYTMKFEMSVKPNEVTILSMISA 148

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C   GAL  G+ +H F +K   + E+   N+L++MY K GDL  A R+FE + + + VSW
Sbjct: 149 CN--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSW 206

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            S+IA     G     I  F  M R GIE D   I ++L AC   G+ ++ + +H  +  
Sbjct: 207 NSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFC 266

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
               + + ++ AL+D YAK G ++ +  VF ++   D V+W  M+           A+ L
Sbjct: 267 TGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKL 326

Query: 447 FVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYV 504
           F +M  +  EPD VT   +L AC+    +  G+     +   +GI    +  + +VD+  
Sbjct: 327 FESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLG 386

Query: 505 KCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG---FGCDAIATFNDMRQAGIEPDEV 560
           +CG+L  A  +   +P + +   W  ++    +HG    G +      +M    ++P   
Sbjct: 387 RCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEP--LDPRNY 444

Query: 561 SFISVLYACSHS 572
             +S +Y+ S S
Sbjct: 445 IMLSNMYSASRS 456



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 176/366 (48%), Gaps = 36/366 (9%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
           S+ + +++H+ + +S ++  DG +G +LV  +   G  ++  ++F+ + +  +  WN L+
Sbjct: 54  SISNCREIHARVFKS-LLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLI 112

Query: 171 HEYSKTGNFKESLYLFKKMQ-SLGIAADSYT-FSCVLKC--------------------- 207
             +S+      SL  F  M+  + +  +  T  S +  C                     
Sbjct: 113 SGFSRC--LHMSLTAFYTMKFEMSVKPNEVTILSMISACNGALDAGKYIHGFGIKVGGTL 170

Query: 208 --------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML 259
                   + + G S  +  A +LF+ + D + VSWN +I+  + NG A +G++ F +M 
Sbjct: 171 EVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMR 230

Query: 260 NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLD 319
            LG   D  T++ +L  C + G      ++H       F  +I+    LLD Y+K G L 
Sbjct: 231 RLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLS 290

Query: 320 GAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA 379
            +  VF ++G    V+WT+M+AGYA  G+   AI+LF  M  +G+EPD    T +L AC+
Sbjct: 291 ASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACS 350

Query: 380 CDGLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-W 437
             GL+  GK   + + E   ++  +   + ++D+  +CG + DA  V   MP++     W
Sbjct: 351 HSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410

Query: 438 NTMIGA 443
             ++GA
Sbjct: 411 GALLGA 416



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 148/366 (40%), Gaps = 71/366 (19%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T  S++  C    +L+ GK +H    + G  ++  V  S L+ M+   GDL    
Sbjct: 136 KPNEVTILSMISACNG--ALDAGKYIHGFGIKVGGTLEVKVANS-LINMYGKSGDLTSAC 192

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           R+F  I +     WN ++      G  +E +  F KM+ LGI  D  T   +L+    +G
Sbjct: 193 RLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLG 252

Query: 213 NSRRVKDAHKL--------------------------------FDELSDRDVVSWNCMIS 240
             +  +  H L                                F E+   D V+W  M++
Sbjct: 253 VGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLA 312

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY A+G+  + +++F+ M N G   D  T   +LS C++ G +  G+             
Sbjct: 313 GYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGK------------- 359

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
             S+ N + ++Y                 E  V  ++ M+    R G+ + A  + + M 
Sbjct: 360 --SYFNVMSEVYGI---------------EPRVDHYSCMVDLLGRCGLLNDAYEVIQNMP 402

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSM 419
              +EP+     ++L AC   G +E+GK+V ++ I    +    Y+   L +MY+   S 
Sbjct: 403 ---MEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYI--MLSNMYSASRSW 457

Query: 420 ADAESV 425
            DA  V
Sbjct: 458 KDAAKV 463


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/559 (39%), Positives = 324/559 (57%), Gaps = 14/559 (2%)

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           GR +H+      F +     N L+ MY+KCG LD A  +F  + ER+VVSW++MI  YA 
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYAL 63

Query: 346 EGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDY-IKENDMQSS- 402
            G    A+ LF  M  +G +EP+    T + +AC     LE G+++H   +   +++SS 
Sbjct: 64  HGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSN 123

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAM-L 451
             + NAL++MY +CGS+ +A  VF+ M   D  SW +MI A          L+LF  M L
Sbjct: 124 AILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNL 183

Query: 452 QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
           +   P  VT+A +L ACA   AL+ G++IH  +   G  +      A++DMY KCG L  
Sbjct: 184 EGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLEC 243

Query: 512 ARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSH 571
           +  +F  +  ++ +SWT MIA    HG G +A+  F +M   G+  D  +FI VL ACSH
Sbjct: 244 SSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSH 303

Query: 572 SGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWG 631
           +GL+ E   FF+ M  +  I P   HY   +D + R G L +A   I  MP  P+   W 
Sbjct: 304 AGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWK 363

Query: 632 SLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
           +LL  CRIH + + A KVAE + +L P+++  Y LL NVYA   ++ +  ++R+ ++ RG
Sbjct: 364 TLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRG 423

Query: 692 LKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINAD 751
           LKK PG S+IE+K KV+ FVAG  +HP   +I   L++L   M+  GY P T+  L   +
Sbjct: 424 LKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVN 483

Query: 752 EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
           E EKE  +  HSEKLA+AFG++  P G  + + KNLRVC DCH   K ++K  RR IV+R
Sbjct: 484 EEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVR 543

Query: 812 DSNRFHHFKDGRCSCRGFW 830
           D++RFHHF+DG+CSC+ +W
Sbjct: 544 DTHRFHHFEDGQCSCKDYW 562



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 173/369 (46%), Gaps = 38/369 (10%)

Query: 112 LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMH 171
           +E+G+++HS +   G      +  + LV M+  CG L E R +FN I    V  W+ ++ 
Sbjct: 1   MEEGRRIHSRLSLCGFH-RATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIG 59

Query: 172 EYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSRRVKDAH--------- 221
            Y+  G  +E+L LF +M++ G +  ++ TF+ V     V+ +  + ++ H         
Sbjct: 60  AYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGEL 119

Query: 222 -------------------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFK 256
                                    K+FD +   D  SW  MI+    N    + LE+F 
Sbjct: 120 KSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFH 179

Query: 257 EMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
            M   G      T+ +VL+ CA  GAL  G+ +H+    + F   +     LLDMY+KCG
Sbjct: 180 RMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCG 239

Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
            L+ + +VF  M  R+ VSWT+MIA  A+ G  D A+ LF+ M  EG+  D      +L 
Sbjct: 240 SLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLR 299

Query: 377 ACACDGLLEIGKD-VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV-KDI 434
           AC+  GL++   +  H  +++  +  +       +D   + G + DAE + + MP   + 
Sbjct: 300 ACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPET 359

Query: 435 VSWNTMIGA 443
           ++W T++ A
Sbjct: 360 LTWKTLLNA 368



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 133/271 (49%), Gaps = 16/271 (5%)

Query: 384 LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
           +E G+ +H  +       +    N L+ MYAKCG + +A ++FN +  + +VSW+ MIG 
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 443 ---------ALDLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHG--I 489
                    AL LF  M  +   EP+ +T   +  AC  +  LE+GREIH   +  G   
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
           S++  + NA+++MYV+CG L  AR +FD +   D  SWT MI     +    +A+  F+ 
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHR 180

Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTG 609
           M   GI P  V+  SVL AC+ SG +  G +  + +         L   A ++D+ ++ G
Sbjct: 181 MNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTA-LLDMYAKCG 239

Query: 610 NLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           +L  + +    M    ++  W +++     H
Sbjct: 240 SLECSSKVFTAMETR-NSVSWTAMIAALAQH 269



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 95/443 (21%), Positives = 176/443 (39%), Gaps = 88/443 (19%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLY---SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
           +++A IG +   G  ++A+ + +   +  + + +  T+  +   C  ++ LE G+++H++
Sbjct: 53  SWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHAL 112

Query: 122 ICESG-IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
              SG +   + +L + L+ M+V CG L+E R+VF+ +D+   F W  ++   ++     
Sbjct: 113 AMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELL 172

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------- 221
           E+L LF +M   GI   S T + VL   A  G  +  K  H                   
Sbjct: 173 EALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALL 232

Query: 222 -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                        K+F  +  R+ VSW  MI+    +G  ++ LE+FKEM   G   D  
Sbjct: 233 DMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADAT 292

Query: 269 TMVTVLSGCANCGAL-----MFGRAVHAFALKAC-------------------------- 297
           T + VL  C++ G +      F   V  +A+                             
Sbjct: 293 TFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHS 352

Query: 298 --FSKEISFNNTLLD---MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
             F  E     TLL+   ++S+         +  K+     +++T +   YA  G +   
Sbjct: 353 MPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQ 412

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
           +R+ +GM   G           L        +E+   VH+++  +    S      L+++
Sbjct: 413 MRVRKGMTDRG-----------LKKVPGKSFIEVKNKVHEFVAGDRAHPSR--DEILLEL 459

Query: 413 YAKCGSMADAESVFNQMPVKDIV 435
               G M +A  V N    KD++
Sbjct: 460 EKLGGRMREAGYVPN---TKDVL 479


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 239/771 (30%), Positives = 405/771 (52%), Gaps = 48/771 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSII 122
           ++ A +  + + G  E+A+ +     ++ +    Y   S+L  C   +    G+ +H+  
Sbjct: 110 SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQG 169

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G    +  +G+ ++ +++ CG  +   RVF  + +     +N L+  +++ G+ + +
Sbjct: 170 YKHGFC-SEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHA 228

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK-------------------- 222
           L +F++MQ  G++ D  T S +L   A +G+ ++    H                     
Sbjct: 229 LEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL 288

Query: 223 ------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                       +F+     +VV WN M+  +       K  E+F +M   G   +  T 
Sbjct: 289 YVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             +L  C     +  G  +H+ ++K  F  ++  +  L+DMYSK G L+ A RV E + E
Sbjct: 349 PCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE 408

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVSWTSMIAGY +      A+  F+ M + GI PD   + S +  CA    +  G  +
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I  +     + + NAL+++YA+CG + +A S F ++  KD ++WN ++         
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLH 528

Query: 443 --ALDLFVAMLQNFEPDGV-TMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL +F+ M Q+     V T    L A A+LA +++G++IH  +++ G S +  V NA+
Sbjct: 529 EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNAL 588

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + +Y KCG    A+  F  +  ++ +SW  +I     HG G +A+  F+ M++ GI+P++
Sbjct: 589 ISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPND 648

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+FI VL ACSH GLV+EG  +F  M  E  I P+ +HYAC++D+  R G L  A +FIE
Sbjct: 649 VTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIE 708

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP+A DA +W +LL  C++H  +++ E  A+H+ ELEP ++  YVLL+N YA  EKW  
Sbjct: 709 EMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWAN 768

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
             ++R+ +  RG++K PG SWIE+K  V+ F  G   HP A++I + L  +   + + GY
Sbjct: 769 RDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGY 828

Query: 740 FPKTRYALINADEME-KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
             + +Y L +  E E ++     HSEKLA+ FG+++LP    +RV KNLRV
Sbjct: 829 -KQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  242 bits (617), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 138/431 (32%), Positives = 220/431 (51%), Gaps = 13/431 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V  A ++F+ELS RD VSW  M+SGY  NG+ E+ L ++++M   G       + +VLS 
Sbjct: 93  VLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSS 152

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C        GR +HA   K  F  EI   N ++ +Y +CG    A RVF  M  R  V++
Sbjct: 153 CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTF 212

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++I+G+A+ G  + A+ +F  M   G+ PD   I+S+L ACA  G L+ G  +H Y+ +
Sbjct: 213 NTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFK 272

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE- 455
             + S   +  +L+D+Y KCG +  A  +FN     ++V WN M+ A      + ++FE 
Sbjct: 273 AGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFEL 332

Query: 456 ----------PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
                     P+  T  CIL  C     ++ G +IH   ++ G  +D  V+  ++DMY K
Sbjct: 333 FCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSK 392

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
            G L  AR + +M+  KD++SWT MIAGY  H    DA+A F +M++ GI PD +   S 
Sbjct: 393 YGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASA 452

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           +  C+    + +G +    + Y       +  +  +V+L +R G + EA+   E +    
Sbjct: 453 ISGCAGINAMRQGLQIHARI-YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIE-HK 510

Query: 626 DATIWGSLLCG 636
           D   W  L+ G
Sbjct: 511 DEITWNGLVSG 521



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 262/522 (50%), Gaps = 48/522 (9%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
           T  +N  I    + G+ E A+E+    + S +  D  T  S+L  CA L  L+ G ++HS
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            + ++GI  D  + GS L+ ++V CGD++    +FN  D   V +WNL++  + +  +  
Sbjct: 269 YLFKAGISSDYIMEGS-LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLA 327

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSRRV-------------------- 217
           +S  LF +MQ+ GI  + +T+ C+L+   C   +    ++                    
Sbjct: 328 KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLI 387

Query: 218 ---------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                    + A ++ + L ++DVVSW  MI+GY+ +   +  L  FKEM   G   D  
Sbjct: 388 DMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            + + +SGCA   A+  G  +HA    + +S ++S  N L+++Y++CG +  A   FE++
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI 507

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             +  ++W  +++G+A+ G+ + A+++F  M + G++ +V+   S L A A    ++ GK
Sbjct: 508 EHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGK 567

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
            +H  + +        V NAL+ +Y KCGS  DA+  F++M  ++ VSWNT+I       
Sbjct: 568 QIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHG 627

Query: 443 ----ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVA 496
               ALDLF  M  +  +P+ VT   +L AC+ +  +E G      +   +GI    +  
Sbjct: 628 RGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHY 687

Query: 497 NAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
             ++D++ + G L  A+   + +P A D + W  +++   +H
Sbjct: 688 ACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH 729



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 229/450 (50%), Gaps = 16/450 (3%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA-LMF 285
           ++ R   S    ++G++A+    K L +F +       +        L  C   G     
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
              +HA A+     K     N L+D+YSK G +  A RVFE++  R  VSW +M++GYA+
Sbjct: 61  VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G+ + A+ L+R M R G+ P  Y ++S+L +C    L   G+ +H    ++   S ++V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNF 454
            NA++ +Y +CGS   AE VF  MP +D V++NT+I           AL++F  M     
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            PD VT++ +L ACASL  L++G ++H Y+ + GIS+D  +  +++D+YVKCG +  A  
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +F+     +++ W +M+  +G       +   F  M+ AGI P++ ++  +L  C+ +  
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           +D G +  + +  +   E  +     ++D+ S+ G L +A R +EM+    D   W S++
Sbjct: 361 IDLGEQIHS-LSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTSMI 418

Query: 635 CGCRIHHEVKLAEKVAEHVFE--LEPDNTG 662
            G   H   K A    + + +  + PDN G
Sbjct: 419 AGYVQHECCKDALAAFKEMQKCGIWPDNIG 448


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 239/771 (30%), Positives = 405/771 (52%), Gaps = 48/771 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLEDGKKVHSII 122
           ++ A +  + + G  E+A+ +     ++ +    Y   S+L  C   +    G+ +H+  
Sbjct: 110 SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQG 169

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            + G    +  +G+ ++ +++ CG  +   RVF  + +     +N L+  +++ G+ + +
Sbjct: 170 YKHGFC-SEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHA 228

Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK-------------------- 222
           L +F++MQ  G++ D  T S +L   A +G+ ++    H                     
Sbjct: 229 LEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL 288

Query: 223 ------------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                       +F+     +VV WN M+  +       K  E+F +M   G   +  T 
Sbjct: 289 YVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             +L  C     +  G  +H+ ++K  F  ++  +  L+DMYSK G L+ A RV E + E
Sbjct: 349 PCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE 408

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           + VVSWTSMIAGY +      A+  F+ M + GI PD   + S +  CA    +  G  +
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
           H  I  +     + + NAL+++YA+CG + +A S F ++  KD ++WN ++         
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLH 528

Query: 443 --ALDLFVAMLQNFEPDGV-TMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
             AL +F+ M Q+     V T    L A A+LA +++G++IH  +++ G S +  V NA+
Sbjct: 529 EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNAL 588

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           + +Y KCG    A+  F  +  ++ +SW  +I     HG G +A+  F+ M++ GI+P++
Sbjct: 589 ISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPND 648

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
           V+FI VL ACSH GLV+EG  +F  M  E  I P+ +HYAC++D+  R G L  A +FIE
Sbjct: 649 VTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIE 708

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP+A DA +W +LL  C++H  +++ E  A+H+ ELEP ++  YVLL+N YA  EKW  
Sbjct: 709 EMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWAN 768

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
             ++R+ +  RG++K PG SWIE+K  V+ F  G   HP A++I + L  +   + + GY
Sbjct: 769 RDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGY 828

Query: 740 FPKTRYALINADEME-KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
             + +Y L +  E E ++     HSEKLA+ FG+++LP    +RV KNLRV
Sbjct: 829 -KQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  242 bits (617), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 138/431 (32%), Positives = 220/431 (51%), Gaps = 13/431 (3%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           V  A ++F+ELS RD VSW  M+SGY  NG+ E+ L ++++M   G       + +VLS 
Sbjct: 93  VLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSS 152

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C        GR +HA   K  F  EI   N ++ +Y +CG    A RVF  M  R  V++
Sbjct: 153 CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTF 212

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            ++I+G+A+ G  + A+ +F  M   G+ PD   I+S+L ACA  G L+ G  +H Y+ +
Sbjct: 213 NTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFK 272

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE- 455
             + S   +  +L+D+Y KCG +  A  +FN     ++V WN M+ A      + ++FE 
Sbjct: 273 AGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFEL 332

Query: 456 ----------PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
                     P+  T  CIL  C     ++ G +IH   ++ G  +D  V+  ++DMY K
Sbjct: 333 FCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSK 392

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
            G L  AR + +M+  KD++SWT MIAGY  H    DA+A F +M++ GI PD +   S 
Sbjct: 393 YGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASA 452

Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
           +  C+    + +G +    + Y       +  +  +V+L +R G + EA+   E +    
Sbjct: 453 ISGCAGINAMRQGLQIHARI-YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIE-HK 510

Query: 626 DATIWGSLLCG 636
           D   W  L+ G
Sbjct: 511 DEITWNGLVSG 521



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 261/522 (50%), Gaps = 48/522 (9%)

Query: 63  TKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHS 120
           T  +N  I    + G+ E A+E+    + S +  D  T  S+L  CA L  L+ G ++HS
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268

Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
            + ++GI   D ++   L+ ++V CGD++    +FN  D   V +WNL++  + +  +  
Sbjct: 269 YLFKAGIS-SDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLA 327

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSRRV-------------------- 217
           +S  LF +MQ+ GI  + +T+ C+L+   C   +    ++                    
Sbjct: 328 KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLI 387

Query: 218 ---------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                    + A ++ + L ++DVVSW  MI+GY+ +   +  L  FKEM   G   D  
Sbjct: 388 DMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            + + +SGCA   A+  G  +HA    + +S ++S  N L+++Y++CG +  A   FE++
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI 507

Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
             +  ++W  +++G+A+ G+ + A+++F  M + G++ +V+   S L A A    ++ GK
Sbjct: 508 EHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGK 567

Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
            +H  + +        V NAL+ +Y KCGS  DA+  F++M  ++ VSWNT+I       
Sbjct: 568 QIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHG 627

Query: 443 ----ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVA 496
               ALDLF  M  +  +P+ VT   +L AC+ +  +E G      +   +GI    +  
Sbjct: 628 RGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHY 687

Query: 497 NAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
             ++D++ + G L  A+   + +P A D + W  +++   +H
Sbjct: 688 ACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH 729



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 229/450 (50%), Gaps = 16/450 (3%)

Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA-LMF 285
           ++ R   S    ++G++A+    K L +F +       +        L  C   G     
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
              +HA A+     K     N L+D+YSK G +  A RVFE++  R  VSW +M++GYA+
Sbjct: 61  VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
            G+ + A+ L+R M R G+ P  Y ++S+L +C    L   G+ +H    ++   S ++V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNF 454
            NA++ +Y +CGS   AE VF  MP +D V++NT+I           AL++F  M     
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240

Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
            PD VT++ +L ACASL  L++G ++H Y+ + GIS+D  +  +++D+YVKCG +  A  
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300

Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
           +F+     +++ W +M+  +G       +   F  M+ AGI P++ ++  +L  C+ +  
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360

Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
           +D G +  + +  +   E  +     ++D+ S+ G L +A R +EM+    D   W S++
Sbjct: 361 IDLGEQIHS-LSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTSMI 418

Query: 635 CGCRIHHEVKLAEKVAEHVFE--LEPDNTG 662
            G   H   K A    + + +  + PDN G
Sbjct: 419 AGYVQHECCKDALAAFKEMQKCGIWPDNIG 448


>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Glycine max]
          Length = 629

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/586 (37%), Positives = 336/586 (57%), Gaps = 42/586 (7%)

Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
           +++H  A+K   S++      LL +Y K   +D AI++F      +V  +TS+I G+   
Sbjct: 44  QSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSF 103

Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
           G +  AI LF  MVR+ +  D YA+T++L AC     L  GK+VH  + ++ +     ++
Sbjct: 104 GSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIA 163

Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM------ 450
             L+++Y KCG + DA  +F+ MP +D+V+   MIG          A+++F  M      
Sbjct: 164 LKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTV 223

Query: 451 --------------------------LQNFEPDGVTMACILPACASLAALERGREIHGYI 484
                                     ++  EP+ VT  C+L ACA L ALE GR IH Y+
Sbjct: 224 CWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYM 283

Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
            + G+  +R VA A+++MY +CG +  A++LFD +  KD+ ++  MI G  +HG   +A+
Sbjct: 284 RKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAV 343

Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
             F++M +  + P+ ++F+ VL ACSH GLVD G   F  M     IEP++EHY CMVD+
Sbjct: 344 ELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDI 403

Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
           L R G L EA+ FI  M V  D  +  SLL  C+IH  + + EKVA+ + E    ++G +
Sbjct: 404 LGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSF 463

Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
           ++L+N YA   +W    ++REK+ + G+ K PGCS IE+   ++ F +G   HP  K+I 
Sbjct: 464 IMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIY 523

Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVT 784
             L+ L    K EGY P T  AL + D+ +KE+AL  HSE+LA+ +G+++  A  T+RV 
Sbjct: 524 KKLEELNYLTKFEGYLPATEVALHDIDDEQKELALAVHSERLAICYGLVSTEAYTTLRVG 583

Query: 785 KNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           KNLR+C DCH M K ++K  RR+IV+RD NRFHHF++G CSC+ +W
Sbjct: 584 KNLRICDDCHAMIKLIAKITRRKIVVRDRNRFHHFENGECSCKDYW 629



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 171/346 (49%), Gaps = 46/346 (13%)

Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
           +  A KLF    + +V  +  +I G+++ G     + +F +M+      D   +  +L  
Sbjct: 75  IDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKA 134

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL-------DG--------- 320
           C    AL  G+ VH   LK+    + S    L+++Y KCG L       DG         
Sbjct: 135 CVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVAC 194

Query: 321 ---------------AIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
                          AI VF +MG R  V WT +I G  R G F+  + +FR M  +G+E
Sbjct: 195 TVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVE 254

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESV 425
           P+      +L ACA  G LE+G+ +H Y+++  ++ + +V+ AL++MY++CG + +A+++
Sbjct: 255 PNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQAL 314

Query: 426 FNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAAL 474
           F+ + VKD+ ++N+MIG          A++LF  ML +   P+G+T   +L AC+    +
Sbjct: 315 FDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLV 374

Query: 475 ERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
           + G EI   + + HGI  +      +VD+  + G L  A   FD I
Sbjct: 375 DLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEA---FDFI 417



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 189/409 (46%), Gaps = 45/409 (11%)

Query: 30  KPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKN---YNAEIGRFCEVGNLEKAMEVL 86
           + S  P +        C +N I  +I      +  N   Y + I  F   G+   A+ + 
Sbjct: 54  RTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLF 113

Query: 87  YSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVT 144
               +  +  D     ++L+ C   ++L  GK+VH ++ +SG+ +D  +   KLV ++  
Sbjct: 114 CQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSI-ALKLVELYGK 172

Query: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
           CG L++ R++F+ +    V    +++                              F C 
Sbjct: 173 CGVLEDARKMFDGMPERDVVACTVMI---------------------------GSCFDCG 205

Query: 205 LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
           +           V++A ++F+E+  RD V W  +I G + NG   +GLEVF+EM   G  
Sbjct: 206 M-----------VEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVE 254

Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
            +  T V VLS CA  GAL  GR +HA+  K            L++MYS+CGD+D A  +
Sbjct: 255 PNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQAL 314

Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
           F+ +  + V ++ SMI G A  G    A+ LF  M++E + P+      +L+AC+  GL+
Sbjct: 315 FDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLV 374

Query: 385 EIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
           ++G ++ + ++  + ++  +     ++D+  + G + +A     +M V+
Sbjct: 375 DLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVE 423


>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/575 (37%), Positives = 336/575 (58%), Gaps = 16/575 (2%)

Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           A +  +L    +C ++   R +HA   K+   ++    + L+  Y+K G  + A+++F+ 
Sbjct: 40  AIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDD 99

Query: 328 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEI 386
           M  + +VSW S+I+G++R      ++  F  M  E  ++P+   I S++ AC+  G L+ 
Sbjct: 100 MPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALDA 155

Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA--- 443
           GK +H +  +      + V+N+L++MY K G +  A  +F  +P  + VSWN++I A   
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVT 215

Query: 444 -------LDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
                  +D F  M +   E D  T+  +L AC  L   +    IHG +   G  A   +
Sbjct: 216 NGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITI 275

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
           A A++D Y K G L  +  +F  +   D ++WT M+AGY  HG G +AI  F  M   G+
Sbjct: 276 ATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGL 335

Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           EPD V+F  +L ACSHSGLV+EG  +FN+M     IEP+++HY+CMVDLL R G L++AY
Sbjct: 336 EPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAY 395

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
             I+ MP+ P+A +WG+LL  CR+H  ++L ++VAEH+  +EP +   Y++L+N+Y+ + 
Sbjct: 396 EVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASR 455

Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
            W++  K+R  +  RGLK+ PG S IE   K + F  G  SHP  +KI S L+ L  +++
Sbjct: 456 SWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIR 515

Query: 736 REGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHE 795
           + GY  KT Y L + +E  KE  +  HSEKLA+AFG+L    G+ + +TKNLR+CGDCH 
Sbjct: 516 KAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHS 575

Query: 796 MAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            AK +S   +R I++RD  RFHHF DG CSC  +W
Sbjct: 576 TAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 184/372 (49%), Gaps = 23/372 (6%)

Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTVLSG 276
           +DA KLFD++  +D+VSWN +ISG+  +      L  F  M   +    +  T+++++S 
Sbjct: 91  EDALKLFDDMPHKDLVSWNSLISGF--SRCLHMSLTAFYTMKFEMSVKPNEVTILSMISA 148

Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
           C+  GAL  G+ +H F +K   + E+   N+L++MY K GDL  A R+FE + + + VSW
Sbjct: 149 CS--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSW 206

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            S+IA     G     I  F  M R GIE D   I ++L AC   G+ ++ + +H  +  
Sbjct: 207 NSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFC 266

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
               + + ++ AL+D YAK G ++ +  VF ++   D V+W  M+           A+ L
Sbjct: 267 TGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKL 326

Query: 447 FVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYV 504
           F +M  +  EPD VT   +L AC+    +  G+     +   +GI    +  + +VD+  
Sbjct: 327 FESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLG 386

Query: 505 KCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG---FGCDAIATFNDMRQAGIEPDEV 560
           +CG+L  A  +   +P + +   W  ++    +HG    G +      +M    ++P   
Sbjct: 387 RCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEP--LDPRNY 444

Query: 561 SFISVLYACSHS 572
             +S +Y+ S S
Sbjct: 445 IMLSNMYSASRS 456



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 175/364 (48%), Gaps = 32/364 (8%)

Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
           S+ + +++H+ + +S ++  DG +G +LV  +   G  ++  ++F+ + +  +  WN L+
Sbjct: 54  SISNCREIHARVFKS-LLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLI 112

Query: 171 HEYSKTGNFKESLYLFKKMQ-----------------SLGIAADSYTFSCVLKC------ 207
             +S+  +   + +   K +                 S  + A  Y     +K       
Sbjct: 113 SGFSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALDAGKYIHGFGIKVGGTLEV 172

Query: 208 ------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
                 + + G S  +  A +LF+ + D + VSWN +I+  + NG A +G++ F +M  L
Sbjct: 173 KVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRL 232

Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
           G   D  T++ +L  C + G      ++H       F  +I+    LLD Y+K G L  +
Sbjct: 233 GIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSAS 292

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
             VF ++G    V+WT+M+AGYA  G+   AI+LF  M  +G+EPD    T +L AC+  
Sbjct: 293 YGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHS 352

Query: 382 GLLEIGKDVHDYIKE-NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNT 439
           GL+  GK   + + E   ++  +   + ++D+  +CG + DA  V   MP++     W  
Sbjct: 353 GLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGA 412

Query: 440 MIGA 443
           ++GA
Sbjct: 413 LLGA 416



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 149/366 (40%), Gaps = 71/366 (19%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K +  T  S++  C+   +L+ GK +H    + G  ++  V  S L+ M+   GDL    
Sbjct: 136 KPNEVTILSMISACSG--ALDAGKYIHGFGIKVGGTLEVKVANS-LINMYGKSGDLTSAC 192

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
           R+F  I +     WN ++      G  +E +  F KM+ LGI  D  T   +L+    +G
Sbjct: 193 RLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLG 252

Query: 213 NSRRVKDAHKL--------------------------------FDELSDRDVVSWNCMIS 240
             +  +  H L                                F E+   D V+W  M++
Sbjct: 253 VGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLA 312

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY A+G+  + +++F+ M N G   D  T   +LS C++ G +  G+             
Sbjct: 313 GYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGK------------- 359

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
             S+ N + ++Y                 E  V  ++ M+    R G+ + A  + + M 
Sbjct: 360 --SYFNVMSEVYGI---------------EPRVDHYSCMVDLLGRCGLLNDAYEVIQNMP 402

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSM 419
              +EP+     ++L AC   G +E+GK+V ++ I    +    Y+   L +MY+   S 
Sbjct: 403 ---MEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYI--MLSNMYSASRSW 457

Query: 420 ADAESV 425
            DA  V
Sbjct: 458 KDAAKV 463


>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g46460, mitochondrial; Flags: Precursor
 gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
 gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/629 (37%), Positives = 350/629 (55%), Gaps = 22/629 (3%)

Query: 214 SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
           S R+ DA  LFDE+  RDVVSWN MISG +  G     +++F EM        + +   +
Sbjct: 79  SNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPER----SVVSWTAM 134

Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
           ++GC   G +   +A   F       K+ +  N+++  Y + G +D A+++F++M  ++V
Sbjct: 135 VNGCFRSGKV--DQAERLFYQMPV--KDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNV 190

Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
           +SWT+MI G  +      A+ LF+ M+R  I+      T ++ ACA      +G  VH  
Sbjct: 191 ISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGL 250

Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------A 443
           I +       YVS +L+  YA C  + D+  VF++   + +  W  ++           A
Sbjct: 251 IIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDA 310

Query: 444 LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
           L +F  ML+N   P+  T A  L +C++L  L+ G+E+HG  ++ G+  D  V N++V M
Sbjct: 311 LSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVM 370

Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
           Y   G +  A S+F  I  K ++SW  +I G   HG G  A   F  M +   EPDE++F
Sbjct: 371 YSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITF 430

Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECN-IEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
             +L ACSH G +++G + F  M    N I+ K++HY CMVD+L R G L EA   IE M
Sbjct: 431 TGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERM 490

Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
            V P+  +W +LL  CR+H +V   EK A  +F L+  ++  YVLL+N+YA A +W  V 
Sbjct: 491 VVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVS 550

Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
           KLR K+ + G+ K PG SW+ I+GK + F +G    PH  +I   L+ LR ++K  GY P
Sbjct: 551 KLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSG--DQPHCSRIYEKLEFLREKLKELGYAP 608

Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
             R AL + ++ +KE  L  HSE+LA+AFG++N   G  + V KNLRVC DCH + K +S
Sbjct: 609 DYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLIS 668

Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
               REIVLRD  RFHHFK+G CSC  +W
Sbjct: 669 GVVGREIVLRDPIRFHHFKNGTCSCGDYW 697



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 216/424 (50%), Gaps = 23/424 (5%)

Query: 129 IDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKK 188
           + D V  + ++   V CGD+    ++F+++    V  W  +++   ++G   ++  LF +
Sbjct: 94  VRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQ 153

Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
           M       D+  ++ ++      G   +V DA KLF ++  ++V+SW  MI G   N  +
Sbjct: 154 MP----VKDTAAWNSMVHGYLQFG---KVDDALKLFKQMPGKNVISWTTMICGLDQNERS 206

Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
            + L++FK ML             V++ CAN  A   G  VH   +K  F  E   + +L
Sbjct: 207 GEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASL 266

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
           +  Y+ C  +  + +VF++     V  WT++++GY+     + A+ +F GM+R  I P+ 
Sbjct: 267 ITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQ 326

Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
               S L++C+  G L+ GK++H    +  +++  +V N+L+ MY+  G++ DA SVF +
Sbjct: 327 STFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK 386

Query: 429 MPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERG 477
           +  K IVSWN++I           A  +F  M++ N EPD +T   +L AC+    LE+G
Sbjct: 387 IFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKG 446

Query: 478 REIHGYILRHGIS-ADRNVAN--AIVDMYVKCGVLVLARSLFD-MIPAKDLISWTIMIAG 533
           R++  Y +  GI+  DR + +   +VD+  +CG L  A  L + M+   + + W  +++ 
Sbjct: 447 RKLF-YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSA 505

Query: 534 YGMH 537
             MH
Sbjct: 506 CRMH 509



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 189/384 (49%), Gaps = 25/384 (6%)

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
           S  +S    ++  Y++   L  A+ +F++M  R VVSW SMI+G    G  + A++LF  
Sbjct: 63  SPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDE 122

Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
           M     E  V + T++++ C   G ++  + +   +   D  +     N+++  Y + G 
Sbjct: 123 MP----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAA----WNSMVHGYLQFGK 174

Query: 419 MADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPA 467
           + DA  +F QMP K+++SW TMI           ALDLF  ML+   +       C++ A
Sbjct: 175 VDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITA 234

Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
           CA+  A   G ++HG I++ G   +  V+ +++  Y  C  +  +R +FD    + +  W
Sbjct: 235 CANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVW 294

Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
           T +++GY ++    DA++ F+ M +  I P++ +F S L +CS  G +D G +  + +  
Sbjct: 295 TALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG-KEMHGVAV 353

Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
           +  +E        +V + S +GN+++A   FI++         W S++ GC  H   K A
Sbjct: 354 KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFK--KSIVSWNSIIVGCAQHGRGKWA 411

Query: 647 EKVAEHVFEL--EPDNTGYYVLLA 668
             +   +  L  EPD   +  LL+
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLS 435



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 35/270 (12%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           K  ++ +  ++  CA+  +   G +VH +I + G + ++ V  S + F +  C  + + R
Sbjct: 222 KSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITF-YANCKRIGDSR 280

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-----SCV--- 204
           +VF++  + +V +W  L+  YS     +++L +F  M    I  +  TF     SC    
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340

Query: 205 ----------------LKCLAVVGNSR--------RVKDAHKLFDELSDRDVVSWNCMIS 240
                           L+  A VGNS          V DA  +F ++  + +VSWN +I 
Sbjct: 341 TLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIV 400

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC--F 298
           G   +G  +    +F +M+ L    D  T   +LS C++CG L  GR +  +        
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHI 460

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
            ++I     ++D+  +CG L  A  + E+M
Sbjct: 461 DRKIQHYTCMVDILGRCGKLKEAEELIERM 490


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 229/724 (31%), Positives = 382/724 (52%), Gaps = 46/724 (6%)

Query: 65  NYNAEIGRFCEVGNLEKA--MEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
           ++N  I  +C+ G    +  + +  S     +D  T   +L+ C  L  L  G ++H++ 
Sbjct: 118 SWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALA 177

Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
            ++G+  D    GS LV M+  C  L +  R F+ +       W   +    +   +   
Sbjct: 178 VKTGLETDVRA-GSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRG 236

Query: 183 LYLFKKMQSLGIA------ADSYTFSCVLKCLA------------------VVGNS---- 214
           + LF +MQ LG+       A ++     + CL+                  VVG +    
Sbjct: 237 MELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDV 296

Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
                 + DA + F  L   +V + N M+ G +  G+  + +++F+ M   G   D+ ++
Sbjct: 297 YAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISL 356

Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
             V S CA       G  VH  A+K+ F  ++   N +LD+Y KC  L  A  VF++M +
Sbjct: 357 SGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ 416

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
           R  VSW ++IA   +   ++  I     M+R G+EPD +   S+L ACA    LE G  V
Sbjct: 417 RDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVV 476

Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL---- 446
           H    ++ +    +VS+ ++DMY KCG++ +A+ + +++  +++VSWN++I    L    
Sbjct: 477 HGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQS 536

Query: 447 ------FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
                 F  ML    +PD  T A +L  CA+LA +E G++IHG I++  +  D  +++ +
Sbjct: 537 EEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTL 596

Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
           VDMY KCG +  +  +F+     D +SW  MI GY +HG G +A+  F  M++A + P+ 
Sbjct: 597 VDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNH 656

Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            +F++VL ACSH GL+D+G ++F++M     + P+LEH+ACMVD+L R+    EA  FI 
Sbjct: 657 ATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIR 716

Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
            MP+  DA +W +LL  C+I  +V++AE  A +V  L+PD+   Y+LL+NVYA + KW +
Sbjct: 717 SMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVD 776

Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
           V + R  + +  L+K PGCSWIE++ +++ F+ G   HP +K++  +L  L  EMK  GY
Sbjct: 777 VSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSGY 836

Query: 740 FPKT 743
            P +
Sbjct: 837 EPAS 840



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 156/594 (26%), Positives = 268/594 (45%), Gaps = 66/594 (11%)

Query: 94  IDTKTYCSILQLCADL--KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
           + T T+  + QLCA     +L  G+  H+ +  SG  +    + + L+ M+  CG     
Sbjct: 15  VATATFSHLYQLCASAGRSALTTGQAAHARMLVSGF-MPTTFVSNCLLQMYARCGGTAHA 73

Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
             VF+ + +     WN ++  Y   G+                                 
Sbjct: 74  HGVFDTMPHRDTVSWNTMLTAYVHAGD--------------------------------- 100

Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
                   A  LF  + D DVVSWN +ISGY  +G+    + +  EM   G  +D  T+ 
Sbjct: 101 -----TDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLA 155

Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
            +L  C     L  G  +HA A+K     ++   + L+DMY KC  LD A+R F  MGER
Sbjct: 156 VLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGER 215

Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
           + VSW + IAG  +   +   + LF  M R G+     A  S   +CA    L   + +H
Sbjct: 216 NSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLH 275

Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI---------- 441
            +  +N   S   V  A++D+YAK G++ DA   F  +P  ++ + N M+          
Sbjct: 276 AHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGA 335

Query: 442 GALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
            A+ LF  M ++    D ++++ +  ACA +    +G ++H   ++ G   D  V NAI+
Sbjct: 336 EAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAIL 395

Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
           D+Y KC  LV A  +F  +  +D +SW  +IA    +    D IA  N+M ++G+EPD+ 
Sbjct: 396 DLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDF 455

Query: 561 SFISVLYACS-----HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
           ++ SVL AC+       GLV  G    + +  +  +       + +VD+  + G ++EA 
Sbjct: 456 TYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVS------STVVDMYCKCGAITEAQ 509

Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDNTGYYVLL 667
           +  + +    +   W S++ G  +  + + A++    + ++  +PD+  Y  +L
Sbjct: 510 KLHDRIG-GQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVL 562


>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
          Length = 563

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/538 (39%), Positives = 322/538 (59%), Gaps = 12/538 (2%)

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
           +N L++ Y + GDL  A +VF++M +R + +W +MIAG  +    +  + LFR M   G 
Sbjct: 26  SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 85

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
            PD Y + S+    A    + IG+ +H Y  +  ++  L V+++L  MY + G + D E 
Sbjct: 86  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 145

Query: 425 VFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAA 473
           V   MPV+++V+WNT+I            L L+  M +    P+ +T   +L +C+ LA 
Sbjct: 146 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 205

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
             +G++IH   ++ G S+   V ++++ MY KCG L  A   F     +D + W+ MI+ 
Sbjct: 206 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 265

Query: 534 YGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           YG HG G +AI  FN M  Q  +E +EV+F+++LYACSHSGL D+G   F+MM  +   +
Sbjct: 266 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 325

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P L+HY C+VDLL R G L +A   I  MP+  D  IW +LL  C IH   ++A++V + 
Sbjct: 326 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 385

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           + +++P+++  YVLLANV+A A++W +V ++R+ +  + +KK  G SW E KG+V+ F  
Sbjct: 386 ILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKM 445

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  S   +K+I S LK L LEMK +GY P T   L + DE EKE  L  HSEKLA+AF +
Sbjct: 446 GDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFAL 505

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           + LP G  IR+ KNLRVC DCH   K++S    REI LRD +RFHHF +G+CSC  +W
Sbjct: 506 MILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 563



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 213/428 (49%), Gaps = 26/428 (6%)

Query: 173 YSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDV 232
           YSK G+F  ++ ++ +M+     + +   +  ++   +V       +A K+FDE+ DR +
Sbjct: 2   YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLV-------NARKVFDEMPDRKL 54

Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
            +WN MI+G I     E+GL +F+EM  LGF+ D  T+ +V SG A   ++  G+ +H +
Sbjct: 55  TTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGY 114

Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
            +K     ++  N++L  MY + G L     V   M  R++V+W ++I G A+ G  +  
Sbjct: 115 TIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETV 174

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
           + L++ M   G  P+     ++L +C+   +   G+ +H    +    S + V ++L+ M
Sbjct: 175 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM 234

Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ--NFEPDGVT 460
           Y+KCG + DA   F++   +D V W++MI           A++LF  M +  N E + V 
Sbjct: 235 YSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 294

Query: 461 MACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
              +L AC+     ++G E+   ++ ++G          +VD+  + G L  A ++   +
Sbjct: 295 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 354

Query: 520 PAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG 578
           P K D++ W  +++   +H     A   F ++ Q  I+P++ S   VL A  H+    + 
Sbjct: 355 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND-SACYVLLANVHASA--KR 409

Query: 579 WRFFNMMR 586
           WR  + +R
Sbjct: 410 WRDVSEVR 417



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 167/344 (48%), Gaps = 35/344 (10%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           L+  +V  GDL   R+VF+++ + K+  WN ++    +    +E L LF++M  LG + D
Sbjct: 29  LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 88

Query: 198 SYTFSCVLKC-----------------------LAVVGNSR---------RVKDAHKLFD 225
            YT   V                          L +V NS          +++D   +  
Sbjct: 89  EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 148

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            +  R++V+WN +I G   NG  E  L ++K M   G   +  T VTVLS C++      
Sbjct: 149 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 208

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ +HA A+K   S  ++  ++L+ MYSKCG L  A + F +  +   V W+SMI+ Y  
Sbjct: 209 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 268

Query: 346 EGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSL 403
            G  D AI LF  M  +  +E +  A  ++L+AC+  GL + G ++ D + E    +  L
Sbjct: 269 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 328

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
                ++D+  + G +  AE++   MP+K DIV W T++ A ++
Sbjct: 329 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 372



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 142/325 (43%), Gaps = 45/325 (13%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T  S+    A L+S+  G+++H    + G+ +D  V+ S L  M++  G L++G  V
Sbjct: 88  DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELD-LVVNSSLAHMYMRNGKLQDGEIV 146

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVV 211
              +    +  WN L+   ++ G  +  LYL+K M+  G   +  TF  VL     LA+ 
Sbjct: 147 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 206

Query: 212 GNSRRVK-----------------------------DAHKLFDELSDRDVVSWNCMISGY 242
           G  +++                              DA K F E  D D V W+ MIS Y
Sbjct: 207 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 266

Query: 243 IANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL---KACF 298
             +G  ++ +E+F  M       ++    + +L  C++ G  +  + +  F +   K  F
Sbjct: 267 GFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSG--LKDKGLELFDMMVEKYGF 324

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS-VVSWTSMIAGYAREGVFDGAIRLFR 357
              +     ++D+  + G LD A  +   M  ++ +V W ++++        + A R+F+
Sbjct: 325 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 384

Query: 358 GMVREGIEPD---VYAITSILHACA 379
            +++  I+P+    Y + + +HA A
Sbjct: 385 EILQ--IDPNDSACYVLLANVHASA 407


>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial; Flags: Precursor
 gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
 gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 787

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/688 (34%), Positives = 388/688 (56%), Gaps = 49/688 (7%)

Query: 89  SEKSKIDTKTYCSILQLCADLKS-LEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
           SE ++I    + S+L+ CA  +  L  G KVH  I + G V DD V+ + L+ M+   G+
Sbjct: 93  SETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGG-VDDDAVIETSLLCMYGQTGN 151

Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
           L +  +VF+ +    +  W+ L+    + G   ++L +FK M   G+  D+ T   V++ 
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211

Query: 208 LAVVGNSRRVKDAH--------------------------------KLFDELSDRDVVSW 235
            A +G  R  +  H                                ++F++++ ++ VSW
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
             MIS Y     +EK L  F EM+  G   +L T+ +VLS C   G +  G++VH FA++
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR 331

Query: 296 ACFSKEI-SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
                   S +  L+++Y++CG L     V   + +R++V+W S+I+ YA  G+   A+ 
Sbjct: 332 RELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALG 391

Query: 355 LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYA 414
           LFR MV + I+PD + + S + AC   GL+ +GK +H ++   D+ S  +V N+L+DMY+
Sbjct: 392 LFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYS 450

Query: 415 KCGSMADAESVFNQMPVKDIVSWNTM----------IGALDLFVAMLQNF-EPDGVTMAC 463
           K GS+  A +VFNQ+  + +V+WN+M          + A+ LF  M  ++ E + VT   
Sbjct: 451 KSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLA 510

Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
           ++ AC+S+ +LE+G+ +H  ++  G+  D     A++DMY KCG L  A ++F  + ++ 
Sbjct: 511 VIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRS 569

Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN 583
           ++SW+ MI  YGMHG    AI+TFN M ++G +P+EV F++VL AC HSG V+EG  +FN
Sbjct: 570 IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN 629

Query: 584 MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEV 643
           +M+    + P  EH+AC +DLLSR+G+L EAYR I+ MP   DA++WGSL+ GCRIH ++
Sbjct: 630 LMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKM 688

Query: 644 KLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
            + + +   + ++  D+TGYY LL+N+YAE  +WEE ++LR  +    LKK PG S IEI
Sbjct: 689 DIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEI 748

Query: 704 KGKVNIFVAGGSSHPHAKKIESLLKRLR 731
             KV  F AG  +     +I   L  L+
Sbjct: 749 DQKVFRFGAGEENRIQTDEIYRFLGNLQ 776



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 185/373 (49%), Gaps = 22/373 (5%)

Query: 279 NCGALMFGRAVHAFALKACFSKEISFNNT-LLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
           +C +L     +HA  L     +      T L++ Y+  G  D +  VFE         + 
Sbjct: 10  SCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYG 69

Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA-CDGLLEIGKDVHDYIKE 396
            +I       + D AI L+  +V E  +   +   S+L ACA     L +G  VH  I +
Sbjct: 70  VLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIK 129

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
             +     +  +L+ MY + G+++DAE VF+ MPV+D+V+W+T++           AL +
Sbjct: 130 GGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRM 189

Query: 447 FVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           F  M+ +  EPD VTM  ++  CA L  L   R +HG I R     D  + N+++ MY K
Sbjct: 190 FKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSK 249

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           CG L+ +  +F+ I  K+ +SWT MI+ Y    F   A+ +F++M ++GIEP+ V+  SV
Sbjct: 250 CGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSV 309

Query: 566 LYACSHSGLVDEGWRFFNM-MRYECNIEPKLEHYA-CMVDLLSRTGNLSEAYRFIEMMPV 623
           L +C   GL+ EG       +R E  ++P  E  +  +V+L +  G LS+      ++ V
Sbjct: 310 LSSCGLIGLIREGKSVHGFAVRRE--LDPNYESLSLALVELYAECGKLSDCE---TVLRV 364

Query: 624 APDATI--WGSLL 634
             D  I  W SL+
Sbjct: 365 VSDRNIVAWNSLI 377


>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
          Length = 695

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 230/609 (37%), Positives = 348/609 (57%), Gaps = 32/609 (5%)

Query: 254 VFKEMLNLGFNVDLA--TMVTVLSGCANCGALMFGRAVHAFALKACFSKE---ISFNNTL 308
           VF  + NL +    A      + S    C  +   + +HAF L+  + +E   +     +
Sbjct: 87  VFSRIPNLKYGSSTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKI 146

Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE-GVFDGAIRLFRGMVREG-IEP 366
           L + S   D++ A RVF+ +   S   W ++I   A +    + A  L+R M+  G   P
Sbjct: 147 LQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSP 206

Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
           D +    +L ACA       GK VH  I ++     +YV+N L+ +Y  CG +  A  VF
Sbjct: 207 DKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVF 266

Query: 427 NQMPVKDIVSWNTMI----------GALDLFVAMLQNFEPDGVTMACILPACASLAALER 476
           ++MP + +VSWN+MI           AL LF  M ++FEPDG TM  +L ACA L +L  
Sbjct: 267 DEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSL 326

Query: 477 GREIHGYILRH---GISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
           G   H ++LR     ++ D  V N++++MY KCG L +A  +F  +  +DL SW  MI G
Sbjct: 327 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 386

Query: 534 YGMHGFGCDAIATFNDM--RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
           +  HG   +A+  F+ M  ++  + P+ V+F+ +L AC+H G V++G ++F+MM  +  I
Sbjct: 387 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCI 446

Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC-RIHHEVKLAEKVA 650
           EP LEHY C+VDL++R G ++EA   +  MP+ PDA IW SLL  C +    V+L+E++A
Sbjct: 447 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIA 506

Query: 651 EHVFELEPDN-------TGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEI 703
            ++   + DN       +G YVLL+ VYA A +W +V  +R+ +S  G++K PGCS IEI
Sbjct: 507 RNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEI 566

Query: 704 KGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP-KTRYALINA-DEMEKEVALCG 761
            G  + F AG +SHP  K+I   LK +   ++  GY P +++  L++A ++  KE +L  
Sbjct: 567 NGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRL 626

Query: 762 HSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKD 821
           HSE+LA+AFG++NLP    IR+ KNLRVC DCHE+ K +SK    EI++RD  RFHHFKD
Sbjct: 627 HSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKD 686

Query: 822 GRCSCRGFW 830
           G CSC  +W
Sbjct: 687 GSCSCLDYW 695



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 23/347 (6%)

Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA--EKGLEVFKEMLNLG- 262
           K L +  +   V  A ++FD + +     WN +I    A+ V+  E+   ++++ML  G 
Sbjct: 145 KILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRA-CAHDVSRKEEAFMLYRKMLERGE 203

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
            + D  T   VL  CA       G+ VH   +K  F  ++  NN L+ +Y  CG LD A 
Sbjct: 204 SSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLAR 263

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDG 382
           +VF++M ERS+VSW SMI    R G +D A++LFR M R   EPD Y + S+L ACA  G
Sbjct: 264 KVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLG 322

Query: 383 LLEIGKDVHDYIKEN---DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
            L +G   H ++      D+   + V N+L++MY KCGS+  AE VF  M  +D+ SWN 
Sbjct: 323 SLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNA 382

Query: 440 MI----------GALDLFVAML---QNFEPDGVTMACILPACASLAALERGREIHGYILR 486
           MI           A++ F  M+   +N  P+ VT   +L AC     + +GR+    ++R
Sbjct: 383 MILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR 442

Query: 487 -HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMI 531
            + I         IVD+  + G +  A  +   +P K D + W  ++
Sbjct: 443 DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 489



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 197/417 (47%), Gaps = 59/417 (14%)

Query: 73  FCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG 132
           F  + NL+      Y S  +    +   S+ + C+D+  L   K++H+    +    +  
Sbjct: 88  FSRIPNLK------YGSSTAGNHHQRIFSLAETCSDMSQL---KQLHAFTLRTTYPEEPA 138

Query: 133 VL--GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM----HEYSKTGNFKESLYLF 186
            L    K++ +  +  D+    RVF+ I+N   F+WN L+    H+ S+    +E+  L+
Sbjct: 139 TLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRK---EEAFMLY 195

Query: 187 KKMQSLGIAA-DSYTFSCVLKCLAVVGNSRRVKDAH------------------------ 221
           +KM   G ++ D +TF  VLK  A +      K  H                        
Sbjct: 196 RKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGS 255

Query: 222 --------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTV 273
                   K+FDE+ +R +VSWN MI   +  G  +  L++F+EM    F  D  TM +V
Sbjct: 256 CGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSV 314

Query: 274 LSGCANCGALMFGRAVHAFALKAC---FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
           LS CA  G+L  G   HAF L+ C    + ++   N+L++MY KCG L  A +VF+ M +
Sbjct: 315 LSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 374

Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMV--REGIEPDVYAITSILHACACDGLLEIGK 388
           R + SW +MI G+A  G  + A+  F  MV  RE + P+      +L AC   G +  G+
Sbjct: 375 RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGR 434

Query: 389 DVHD-YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
              D  +++  ++ +L     ++D+ A+ G + +A  +   MP+K D V W +++ A
Sbjct: 435 QYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 491



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 128/296 (43%), Gaps = 41/296 (13%)

Query: 91  KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
           +S  D  T+  +L+ CA +    +GK+VH  I + G    D  + + L+ ++ +CG L  
Sbjct: 203 ESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFG-GDVYVNNGLIHLYGSCGCLDL 261

Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL----- 205
            R+VF+++    +  WN ++    + G +  +L LF++MQ      D YT   VL     
Sbjct: 262 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAG 320

Query: 206 ----------------KCLAVVGNSRRVKD--------------AHKLFDELSDRDVVSW 235
                           KC   V     VK+              A ++F  +  RD+ SW
Sbjct: 321 LGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASW 380

Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFA 293
           N MI G+  +G AE+ +  F  M++   NV  +  T V +L  C + G +  GR      
Sbjct: 381 NAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM 440

Query: 294 LK-ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAGYAREG 347
           ++  C    +     ++D+ ++ G +  AI +   M  +   V W S++    ++G
Sbjct: 441 VRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 496


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/716 (32%), Positives = 369/716 (51%), Gaps = 46/716 (6%)

Query: 142 FVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF 201
           +V  GDL   R +F+ + +  V  W +LM  Y+   +F E+  LF++M       D  TF
Sbjct: 85  YVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTF 144

Query: 202 SCVLKCL--AVVGNS--------------------------------RRVKDAHKLFDEL 227
           + +L     AV  N+                                RR+  A  LF+E+
Sbjct: 145 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEI 204

Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
            D+D V++N +I+GY  +G+  + + +F +M   G      T   VL           G+
Sbjct: 205 LDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQ 264

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            +H  ++   FS++ S  N +L  YSK   +     +F +M E   VS+  +I+ Y++  
Sbjct: 265 QLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAE 324

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
            ++ ++ LFR M   G +   +   ++L   A    L++G+ VH         S L+V N
Sbjct: 325 QYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGN 384

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEP 456
           +L+DMYAKC    +AE +F  +  +  VSW  +I            L LF  M   N   
Sbjct: 385 SLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRA 444

Query: 457 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 516
           D  T A +L A A  A+L  G+++H +I+R G   +    + +VDMY KCG +  A  +F
Sbjct: 445 DQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 504

Query: 517 DMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD 576
           + +P ++ +SW  +I+ Y  +G G  AI  F  M Q+G++PD VS + VL ACSH G V+
Sbjct: 505 EEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVE 564

Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
           +G  FF  M     I PK +HYACM+DLL R G  +EA + ++ MP  PD  +W S+L  
Sbjct: 565 QGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 624

Query: 637 CRIHHEVKLAEKVAEHVFELEP-DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
           CRI+    LAE+ AE +F +E   +   YV ++N+YA A KWE V+ +++ +  RG+KK 
Sbjct: 625 CRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKV 684

Query: 696 PGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEK 755
           P  SW+E+  K+++F +   +HP+  +I   +  L  E++REGY P T   + + DE  K
Sbjct: 685 PAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMK 744

Query: 756 EVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLR 811
             +L  HSE+LA+AF +++ P G  I V KNLR C DCH   K +SK  +R I  +
Sbjct: 745 IESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVITTQ 800



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 196/390 (50%), Gaps = 47/390 (12%)

Query: 98  TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
           T+  +L+    L     G+++H +   +G   D  V G++++  +     + E R +FN+
Sbjct: 246 TFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASV-GNQILHFYSKHDRVLETRNLFNE 304

Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK----------- 206
           +       +N+++  YS+   ++ESL LF++MQ +G    ++ F+ +L            
Sbjct: 305 MPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVG 364

Query: 207 ----CLAV---------VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIAN 245
               C A+         VGNS            +A  +F  LS R  VSW  +ISGY+  
Sbjct: 365 RQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQK 424

Query: 246 GVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN 305
           G+   GL++F +M       D +T  TVL   A   +L+ G+ +HAF +++   + +   
Sbjct: 425 GLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSG 484

Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
           + L+DMY+KCG +  A++VFE+M +R+ VSW ++I+ YA  G  + AI  F  M++ G++
Sbjct: 485 SGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQ 544

Query: 366 PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNA-------LMDMYAKCGS 418
           PD  +I  +L AC+  G +E G +    +      S +Y           ++D+  + G 
Sbjct: 545 PDSVSILGVLIACSHCGFVEQGTEFFQAM------SPIYGITPKKKHYACMLDLLGRNGR 598

Query: 419 MADAESVFNQMPVK-DIVSWNTMIGALDLF 447
            A+AE + ++MP + D + W++++ A  ++
Sbjct: 599 FAEAEKLMDEMPFEPDEIMWSSVLNACRIY 628



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 13/275 (4%)

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
            NT++  Y K GDL  A  +F+ M +R+VV+WT ++  YA    FD A +LFR M R   
Sbjct: 78  TNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCT 137

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS--NALMDMYAKCGSMADA 422
            PD    T++L  C           VH +  +    ++L+++  N L+  Y +   +  A
Sbjct: 138 LPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLA 197

Query: 423 ESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASL 471
             +F ++  KD V++NT+I           A+ LF+ M Q+  +P   T + +L A   L
Sbjct: 198 CVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGL 257

Query: 472 AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
                G+++HG  +  G S D +V N I+  Y K   ++  R+LF+ +P  D +S+ ++I
Sbjct: 258 HDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVI 317

Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
           + Y       +++  F +M+  G +     F ++L
Sbjct: 318 SSYSQAEQYEESLNLFREMQCMGFDRRNFPFATML 352



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 41/314 (13%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSII 122
           +YN  I  + +    E+++ +    +    D + +   ++L + A+L SL+ G++VH   
Sbjct: 312 SYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVH--- 368

Query: 123 CESGIVIDDGVL--GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
           C++ +   D +L  G+ LV M+  C    E   +F  +       W  L+  Y + G   
Sbjct: 369 CQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHG 428

Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVV----------------GNSRRV------- 217
             L LF KM+   + AD  TF+ VLK  A                  GN   V       
Sbjct: 429 AGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLV 488

Query: 218 ---------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                    KDA ++F+E+ DR+ VSWN +IS Y  NG  E  +  F +M+  G   D  
Sbjct: 489 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSV 548

Query: 269 TMVTVLSGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
           +++ VL  C++CG +  G     A +     + +      +LD+  + G    A ++ ++
Sbjct: 549 SILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 608

Query: 328 MG-ERSVVSWTSMI 340
           M  E   + W+S++
Sbjct: 609 MPFEPDEIMWSSVL 622



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 13/176 (7%)

Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNFE 455
           +N ++  Y K G ++ A  +F+ MP + +V+W  ++G          A  LF  M ++  
Sbjct: 78  TNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCT 137

Query: 456 -PDGVTMACILPACASLAALERGREIHGYILRHGISAD--RNVANAIVDMYVKCGVLVLA 512
            PD VT   +LP C          ++H + ++ G   +    V N ++  Y +   L LA
Sbjct: 138 LPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLA 197

Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
             LF+ I  KD +++  +I GY   G   +AI  F  MRQ+G +P + +F  VL A
Sbjct: 198 CVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 38/206 (18%)

Query: 93  KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
           + D  T+ ++L+  A   SL  GK++H+ I  SG  +++   GS LV M+  CG +K+  
Sbjct: 443 RADQSTFATVLKASAGFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAKCGSIKDAV 501

Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----- 207
           +VF ++ +     WN L+  Y+  G+ + ++  F KM   G+  DS +   VL       
Sbjct: 502 QVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCG 561

Query: 208 ----------------------------LAVVGNSRRVKDAHKLFDELS-DRDVVSWNCM 238
                                       L ++G + R  +A KL DE+  + D + W+ +
Sbjct: 562 FVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 621

Query: 239 ISG---YIANGVAEKGLEVFKEMLNL 261
           ++    Y    +AE+  E    M  L
Sbjct: 622 LNACRIYKNQSLAERAAEQLFSMEKL 647



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%)

Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
            N ++  YVK G L  AR LFD +P + +++WTI++  Y  +    +A   F  M ++  
Sbjct: 78  TNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCT 137

Query: 556 EPDEVSFISVLYACS 570
            PD V+F ++L  C+
Sbjct: 138 LPDYVTFTTLLPGCN 152


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/731 (32%), Positives = 383/731 (52%), Gaps = 49/731 (6%)

Query: 65  NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKT---YCSILQLCADLKSLEDGKKVHSI 121
            +++ +  + + G  E+A+ V    ++   +        S+++ C  L  +E G ++H  
Sbjct: 95  TWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGF 154

Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
           +  SG    D  +G+ L+  +   G+++E R VF+++       W  ++  Y+K G    
Sbjct: 155 VVRSGF-DQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAV 213

Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKC-------------------------LAVVG---- 212
           SL LF +M+   +  D Y  S VL                           ++VV     
Sbjct: 214 SLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLID 273

Query: 213 ---NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
                 RVK   KLFD++  ++++SW  MISGY+ N    + +++F EM  LG+  D   
Sbjct: 274 FYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFA 333

Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
             +VL+ C +  AL  GR VHA+ +KA    +    N L+DMY+K   L  A +VF+ M 
Sbjct: 334 CTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMA 393

Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
           E++V+S+ +MI GY+ +     A+ LF  M      P +    S+L   A    LE+ K 
Sbjct: 394 EQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQ 453

Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-------- 441
           +H  I +  +   L+  +AL+D+Y+KC  + DA  VF +M  KDIV WN M         
Sbjct: 454 IHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLE 513

Query: 442 --GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
              AL L+  +     +P+  T A ++ A ++LA+L  G++ H  +++ G+     V NA
Sbjct: 514 NEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNA 573

Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
           +VDMY KCG +  AR +F+    +D++ W  MI+ +  HG   +A+  F +M + GI+P+
Sbjct: 574 LVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPN 633

Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
            V+F++VL ACSH+G V++G   FN M     I+P  EHYAC+V LL R+G L EA  FI
Sbjct: 634 YVTFVAVLSACSHAGRVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLFEAKEFI 692

Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
           E MP+ P A +W SLL  CRI   V+L +  AE     +P ++G Y+LL+N++A    W 
Sbjct: 693 EKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWA 752

Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREG 738
           +VKK+R+++    + K PG SWIE+  KVN+F+A  ++H  A  I S+L  L   +K  G
Sbjct: 753 DVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREA-DIGSVLDILIQHIKGAG 811

Query: 739 YFPKTRYALIN 749
           Y P     L+N
Sbjct: 812 YVPDATALLMN 822



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 165/598 (27%), Positives = 303/598 (50%), Gaps = 55/598 (9%)

Query: 97  KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
           + + ++LQL      +   K +H  I  SG+   D  L + L+ +      +   R VF+
Sbjct: 28  REFANLLQLSISRNPIIHYKIIHGQIIVSGLQ-SDTFLANILINVCSKSDRVDNARVVFD 86

Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ--------------------SLGIA- 195
           K+ +  +  W+ ++  YS+ G  +E+L +F  +Q                     LG+  
Sbjct: 87  KMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVE 146

Query: 196 ---------------ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
                           D Y  + ++   +  GN   +++A  +FD+LS++  V+W  +I+
Sbjct: 147 KGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGN---IEEARLVFDQLSEKTAVTWTTIIA 203

Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
           GY   G +   LE+F +M       D   + +VLS C+    L  G+ +HA+ L+     
Sbjct: 204 GYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM 263

Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
           ++S  N L+D Y+KC  +    ++F++M  ++++SWT+MI+GY +      A++LF  M 
Sbjct: 264 DVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMN 323

Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
           R G +PD +A TS+L +C     LE G+ VH Y  + +++S  +V N L+DMYAK   + 
Sbjct: 324 RLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLI 383

Query: 421 DAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACA 469
           DA+ VF+ M  ++++S+N MI           AL+LF  M ++ F P  +T   +L   A
Sbjct: 384 DAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSA 443

Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
           SL ALE  ++IHG I++ G+S D    +A++D+Y KC  +  AR +F+ +  KD++ W  
Sbjct: 444 SLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNA 503

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFN-MMRYE 588
           M  GY  H    +A+  ++ ++ +  +P+E +F +++ A S+   +  G +F N +++  
Sbjct: 504 MFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMG 563

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
            +  P + +   +VD+ ++ G++ EA +      +  D   W S++     H E + A
Sbjct: 564 LDFCPFVTN--ALVDMYAKCGSIEEARKMFN-SSIWRDVVCWNSMISTHAQHGEAEEA 618



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 252/469 (53%), Gaps = 17/469 (3%)

Query: 193 GIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGL 252
           G+ +D++  + ++    V   S RV +A  +FD++  +++++W+ M+S Y   G +E+ L
Sbjct: 57  GLQSDTFLANILIN---VCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEAL 113

Query: 253 EVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
            VF ++    G + +   + +V+  C   G +  G  +H F +++ F +++    +L+D 
Sbjct: 114 MVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDF 173

Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
           YSK G+++ A  VF+++ E++ V+WT++IAGY + G    ++ LF  M    + PD Y +
Sbjct: 174 YSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVV 233

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
           +S+L AC+    LE GK +H Y+     +  + V N L+D Y KC  +     +F+QM V
Sbjct: 234 SSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVV 293

Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
           K+I+SW TMI           A+ LF  M +  ++PDG     +L +C S  ALE+GR++
Sbjct: 294 KNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQV 353

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFG 540
           H Y ++  + +D  V N ++DMY K  +L+ A+ +FD++  +++IS+  MI GY      
Sbjct: 354 HAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKL 413

Query: 541 CDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC 600
            +A+  F++MR     P  ++F+S+L   S S    E  +  + +  +  +   L   + 
Sbjct: 414 SEALELFHEMRVRLFPPSLLTFVSLL-GVSASLFALELSKQIHGLIIKFGVSLDLFAGSA 472

Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
           ++D+ S+   + +A    E M    D  +W ++  G   H E + A K+
Sbjct: 473 LIDVYSKCSYVKDARHVFEEMN-EKDIVVWNAMFFGYTQHLENEEALKL 520



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 3/187 (1%)

Query: 451 LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
           + N  P     A +L    S   +   + IHG I+  G+ +D  +AN ++++  K   + 
Sbjct: 20  IPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVD 79

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYAC 569
            AR +FD +P K+LI+W+ M++ Y   G+  +A+  F D+ R++G  P+E    SV+ AC
Sbjct: 80  NARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRAC 139

Query: 570 SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
           +  G+V++G +    +      +  +     ++D  S+ GN+ EA    + +     A  
Sbjct: 140 TQLGVVEKGAQLHGFV-VRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLS-EKTAVT 197

Query: 630 WGSLLCG 636
           W +++ G
Sbjct: 198 WTTIIAG 204


>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/525 (42%), Positives = 316/525 (60%), Gaps = 25/525 (4%)

Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE-PDVYAI 371
           S    LD A +VF+++   ++ +W ++I  YA       ++ +F  M+ +  + PD +  
Sbjct: 80  SPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTF 139

Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
             ++ A +    L  GK  H  + +  + S +++ N+L+  YAKCG +     VF   P 
Sbjct: 140 PFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPR 199

Query: 432 KDIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREI 480
           +D+VSWN+MI A          L+LF  M  QN +P+G+TM  +L ACA  +  E GR +
Sbjct: 200 RDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWV 259

Query: 481 HGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG----- 535
           H YI R+ I     ++NA++DMY KCG +  A+ LFD +P KD++SWT M+ GY      
Sbjct: 260 HSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEY 319

Query: 536 -------MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
                  MHG G DAIA F+ M++  ++P+ V+F ++L ACSH GLV+EG  FFN M   
Sbjct: 320 DAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELV 379

Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
             + P ++HYACMVD+L R G L EA   IE MP+AP A++WG+LL  C IH  V LAE+
Sbjct: 380 YGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQ 439

Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
               + ELEP N G YVLL+N+YA+A KW+ V  LR+ +   GLKK PGCS IE+ G V+
Sbjct: 440 ACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVH 499

Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME-KEVALCGHSEKLA 767
            F+ G +SHP AKKI + L  +   ++  GY P   + L   +E + KE AL  HSEKLA
Sbjct: 500 EFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLA 559

Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRD 812
           +AFG+++    Q IR+ KNLRVCGDCH +AK +SK   REI+LRD
Sbjct: 560 IAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRD 604



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 194/395 (49%), Gaps = 30/395 (7%)

Query: 169 LMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELS 228
           L+ + S+T   K+   +  +M   G+  D ++ S ++   A +     +  A ++FD++ 
Sbjct: 41  LIDQCSETKQLKQ---IHAQMLRTGLFFDPFSASRLITA-AALSPFPSLDYAQQVFDQIP 96

Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVLSGCANCGALMFGR 287
             ++ +WN +I  Y ++    + L +F  ML+   +  D  T   ++   +    L  G+
Sbjct: 97  HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
           A H   +K     ++   N+L+  Y+KCG+L    RVF     R VVSW SMI  + + G
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGG 216

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
             + A+ LF+ M  + ++P+   +  +L ACA     E G+ VH YI+ N +  SL +SN
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSN 276

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------------------GALD 445
           A++DMY KCGS+ DA+ +F++MP KDIVSW TM+                       A+ 
Sbjct: 277 AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIA 336

Query: 446 LFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYI-LRHGISADRNVANAIVDMY 503
           LF  M ++  +P+ VT   IL AC+ +  +E GR     + L +G+         +VD+ 
Sbjct: 337 LFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDIL 396

Query: 504 VKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
            + G+L  A  L + +P     S W  ++    +H
Sbjct: 397 GRAGLLEEAVELIEKMPMAPAASVWGALLGACTIH 431



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 215/442 (48%), Gaps = 69/442 (15%)

Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM--FVTCGDLKEGRRVFNKI 158
           S++  C++ K L   K++H+ +  +G+  D     S+L+          L   ++VF++I
Sbjct: 40  SLIDQCSETKQL---KQIHAQMLRTGLFFDP-FSASRLITAAALSPFPSLDYAQQVFDQI 95

Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYTFSCVLKCLA------- 209
            +  ++ WN L+  Y+ + N  +SL +F +M  QS     D +TF  ++K  +       
Sbjct: 96  PHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDF-PDKFTFPFLIKAASELEELFT 154

Query: 210 -----------VVGNSRRVKDA--------------HKLFDELSDRDVVSWNCMISGYIA 244
                      ++G+   + ++              +++F     RDVVSWN MI+ ++ 
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQ 214

Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
            G  E+ LE+F+EM       +  TMV VLS CA      FGR VH++  +    + ++ 
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTL 274

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG------------A 352
           +N +LDMY+KCG ++ A R+F+KM E+ +VSWT+M+ GYA+ G +D             A
Sbjct: 275 SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDA 334

Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMD 411
           I LF  M  + ++P+    T+IL AC+  GL+E G+   + ++    +   +     ++D
Sbjct: 335 IALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVD 394

Query: 412 MYAKCGSMADAESVFNQMPVKDIVS-WNTMIGALDLFVAMLQNFEPDGVTMACILPACAS 470
           +  + G + +A  +  +MP+    S W  ++GA  +          + V +A    AC+ 
Sbjct: 395 ILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIH---------ENVVLA--EQACSQ 443

Query: 471 LAALERGREIHG-YILRHGISA 491
           L  LE G   HG Y+L   I A
Sbjct: 444 LIELEPGN--HGAYVLLSNIYA 463



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 47/294 (15%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T+  +++  ++L+ L  GK  H ++ +  +  D  +L S L+  +  CG+L  G RV
Sbjct: 135 DKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNS-LIHFYAKCGELGLGYRV 193

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----- 209
           F       V  WN ++  + + G  +E+L LF++M++  +  +  T   VL   A     
Sbjct: 194 FVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDF 253

Query: 210 -------------------VVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGY 242
                               + N+          V+DA +LFD++ ++D+VSW  M+ GY
Sbjct: 254 EFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGY 313

Query: 243 -------IANGVAEKG-----LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA-V 289
                   A G+A  G     + +F +M       +  T   +L  C++ G +  GR   
Sbjct: 314 AKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFF 373

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAG 342
           +   L       +     ++D+  + G L+ A+ + EKM      S W +++  
Sbjct: 374 NQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGA 427


>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
 gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 565

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/538 (39%), Positives = 322/538 (59%), Gaps = 12/538 (2%)

Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
           +N L++ Y + GDL  A +VF++M +R + +W +MIAG  +    +  + LFR M   G 
Sbjct: 28  SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87

Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
            PD Y + S+    A    + IG+ +H Y  +  ++  L V+++L  MY + G + D E 
Sbjct: 88  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147

Query: 425 VFNQMPVKDIVSWNTMI----------GALDLFVAM-LQNFEPDGVTMACILPACASLAA 473
           V   MPV+++V+WNT+I            L L+  M +    P+ +T   +L +C+ LA 
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207

Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
             +G++IH   ++ G S+   V ++++ MY KCG L  A   F     +D + W+ MI+ 
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267

Query: 534 YGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
           YG HG G +AI  FN M  Q  +E +EV+F+++LYACSHSGL D+G   F+MM  +   +
Sbjct: 268 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327

Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
           P L+HY C+VDLL R G L +A   I  MP+  D  IW +LL  C IH   ++A++V + 
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387

Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
           + +++P+++  YVLLANV+A A++W +V ++R+ +  + +KK  G SW E KG+V+ F  
Sbjct: 388 ILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKM 447

Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
           G  S   +K+I S LK L LEMK +GY P T   L + DE EKE  L  HSEKLA+AF +
Sbjct: 448 GDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFAL 507

Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
           + LP G  IR+ KNLRVC DCH   K++S    REI LRD +RFHHF +G+CSC  +W
Sbjct: 508 MILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 214/431 (49%), Gaps = 26/431 (6%)

Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD 229
           M  YSK G+F  ++ ++ +M+     + +   +  ++   +V       +A K+FDE+ D
Sbjct: 1   MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLV-------NARKVFDEMPD 53

Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
           R + +WN MI+G I     E+GL +F+EM  LGF+ D  T+ +V SG A   ++  G+ +
Sbjct: 54  RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQI 113

Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           H + +K     ++  N++L  MY + G L     V   M  R++V+W ++I G A+ G  
Sbjct: 114 HGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCP 173

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
           +  + L++ M   G  P+     ++L +C+   +   G+ +H    +    S + V ++L
Sbjct: 174 ETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSL 233

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ--NFEPD 457
           + MY+KCG + DA   F++   +D V W++MI           A++LF  M +  N E +
Sbjct: 234 ISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEIN 293

Query: 458 GVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLF 516
            V    +L AC+     ++G E+   ++ ++G          +VD+  + G L  A ++ 
Sbjct: 294 EVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAII 353

Query: 517 DMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
             +P K D++ W  +++   +H     A   F ++ Q  I+P++ S   VL A  H+   
Sbjct: 354 RSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND-SACYVLLANVHASA- 409

Query: 576 DEGWRFFNMMR 586
            + WR  + +R
Sbjct: 410 -KRWRDVSEVR 419



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 167/344 (48%), Gaps = 35/344 (10%)

Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
           L+  +V  GDL   R+VF+++ + K+  WN ++    +    +E L LF++M  LG + D
Sbjct: 31  LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90

Query: 198 SYTFSCVLKC-----------------------LAVVGNSR---------RVKDAHKLFD 225
            YT   V                          L +V NS          +++D   +  
Sbjct: 91  EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150

Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
            +  R++V+WN +I G   NG  E  L ++K M   G   +  T VTVLS C++      
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210

Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
           G+ +HA A+K   S  ++  ++L+ MYSKCG L  A + F +  +   V W+SMI+ Y  
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270

Query: 346 EGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSL 403
            G  D AI LF  M  +  +E +  A  ++L+AC+  GL + G ++ D + E    +  L
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330

Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
                ++D+  + G +  AE++   MP+K DIV W T++ A ++
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 374



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 142/325 (43%), Gaps = 45/325 (13%)

Query: 95  DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
           D  T  S+    A L+S+  G+++H    + G+ +D  V+ S L  M++  G L++G  V
Sbjct: 90  DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELD-LVVNSSLAHMYMRNGKLQDGEIV 148

Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---LAVV 211
              +    +  WN L+   ++ G  +  LYL+K M+  G   +  TF  VL     LA+ 
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208

Query: 212 GNSRRVK-----------------------------DAHKLFDELSDRDVVSWNCMISGY 242
           G  +++                              DA K F E  D D V W+ MIS Y
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268

Query: 243 IANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL---KACF 298
             +G  ++ +E+F  M       ++    + +L  C++ G  +  + +  F +   K  F
Sbjct: 269 GFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSG--LKDKGLELFDMMVEKYGF 326

Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS-VVSWTSMIAGYAREGVFDGAIRLFR 357
              +     ++D+  + G LD A  +   M  ++ +V W ++++        + A R+F+
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386

Query: 358 GMVREGIEPD---VYAITSILHACA 379
            +++  I+P+    Y + + +HA A
Sbjct: 387 EILQ--IDPNDSACYVLLANVHASA 409


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/613 (36%), Positives = 347/613 (56%), Gaps = 14/613 (2%)

Query: 232 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGAL-MFGRAVH 290
           VVS+   ISG   +G     L  F  ML LG   +  T  +     A+       G  +H
Sbjct: 82  VVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIH 141

Query: 291 AFALKACFSKEISFNN-TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
           + A++  +     F +   LDMY K G L  A  +F +M  R+VV+W +++     +G  
Sbjct: 142 SLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRP 201

Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
              I  + G+   G  P+V +  +  +ACA    L +G+  H ++ +   +  + V N++
Sbjct: 202 LETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSM 261

Query: 410 MDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL-------DLFVAML----QNFEPDG 458
           +D Y KC     A +VF+ M V++ VSW +M+ A        + F A L       EP  
Sbjct: 262 VDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTD 321

Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
             ++  L  CA L  L  GR +H   +R  I A+  VA+A+VDMY KCG +  A  +F  
Sbjct: 322 FMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYE 381

Query: 519 IPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-IEPDEVSFISVLYACSHSGLVDE 577
            P ++L++W  MI GY   G   +A+  F+DM ++G   P+ ++ ++V+ +CS  GL  +
Sbjct: 382 TPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKD 441

Query: 578 GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGC 637
           G+  F  MR    IEP+ EHYAC+VDLL R G   +AY  I+ MP+ P  ++WG+LL  C
Sbjct: 442 GYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGAC 501

Query: 638 RIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPG 697
           ++H + +L    AE +FEL+P ++G +VLL+N++A A +W E   +R+++   G+KK+PG
Sbjct: 502 KMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPG 561

Query: 698 CSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEV 757
           CSW+  K  V++F A  + H    +I++LL +LR +M+  GY P T+Y+L + +E EKE 
Sbjct: 562 CSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKES 621

Query: 758 ALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFH 817
            +  HSEKLA+AFG++ +P G  IR+ KNLR+C DCH   KF+S    REI++RD+NRFH
Sbjct: 622 EVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFH 681

Query: 818 HFKDGRCSCRGFW 830
           HFK  +CSC  +W
Sbjct: 682 HFKQYQCSCGDYW 694



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 175/337 (51%), Gaps = 14/337 (4%)

Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS 275
           R+K A  LF E+ +R+VV+WN +++  + +G   + +E +  +   G   ++ +     +
Sbjct: 169 RLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFN 228

Query: 276 GCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS 335
            CA    L  G   H F +K  F  ++S  N+++D Y KC     A  VF+ MG R+ VS
Sbjct: 229 ACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVS 288

Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
           W SM+A YA+ G  + A   + G  R G EP  + ++S L  CA    L +G+ +H    
Sbjct: 289 WCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAV 348

Query: 396 ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALD 445
            + + ++++V++AL+DMY KCG + DAE +F + P +++V+WN MIG          AL 
Sbjct: 349 RSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALL 408

Query: 446 LFVAMLQNFE--PDGVTMACILPACASLAALERGREIHGYIL-RHGISADRNVANAIVDM 502
           +F  M+++ E  P+ +T+  ++ +C+     + G E+   +  R GI         +VD+
Sbjct: 409 VFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDL 468

Query: 503 YVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
             + G+   A  +   +P +  IS W  ++    MHG
Sbjct: 469 LGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHG 505



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 166/364 (45%), Gaps = 35/364 (9%)

Query: 115 GKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYS 174
           G ++HS+    G +  D  +    + M+   G LK  R +F ++ N  V  WN +M    
Sbjct: 137 GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 196

Query: 175 KTGNFKESLYLFKKMQSLG-----IAADSYTFSC---------------VLKC------- 207
             G   E++  +  ++  G     ++A ++  +C               V+KC       
Sbjct: 197 LDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVS 256

Query: 208 -----LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
                +   G  R    A  +FD +  R+ VSW  M++ Y  NG  E+    +      G
Sbjct: 257 VLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG 316

Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
                  + + L+ CA    L  GRA+HA A+++C    I   + L+DMY KCG ++ A 
Sbjct: 317 EEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAE 376

Query: 323 RVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACD 381
           ++F +  +R++V+W +MI GYA  G    A+ +F  M+R G   P+   + +++ +C+  
Sbjct: 377 QIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRG 436

Query: 382 GLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNT 439
           GL + G ++ + ++E   ++        ++D+  + G    A  V   MP++  +S W  
Sbjct: 437 GLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGA 496

Query: 440 MIGA 443
           ++GA
Sbjct: 497 LLGA 500



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 169/366 (46%), Gaps = 16/366 (4%)

Query: 285 FGRAVHAFALKACFSKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGY 343
            GRA HA AL+        F    L+++YSK      A          +VVS+T+ I+G 
Sbjct: 33  LGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGA 92

Query: 344 AREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA-CDGLLEIGKDVHDY-IKENDMQS 401
           A+ G    A+  F GM+R G+ P+ +   S   A A       IG  +H   I+   +  
Sbjct: 93  AQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPV 152

Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE------ 455
             +VS A +DMY K G +  A  +F +MP +++V+WN ++    L    L+  E      
Sbjct: 153 DPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLR 212

Query: 456 -----PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
                P+ V+      ACA    L  G + HG++++ G   D +V N++VD Y KC    
Sbjct: 213 EAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAG 272

Query: 511 LARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
            AR++FD +  ++ +SW  M+A Y  +G   +A A +   R++G EP +    S L  C+
Sbjct: 273 KARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCA 332

Query: 571 HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIW 630
               +  G R  + +     I+  +   + +VD+  + G + +A +     P   +   W
Sbjct: 333 GLLGLHLG-RALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQR-NLVTW 390

Query: 631 GSLLCG 636
            +++ G
Sbjct: 391 NAMIGG 396



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 115/270 (42%), Gaps = 22/270 (8%)

Query: 70  IGRFCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSIICESGI 127
           +  + + G  E+A      + +S  +   +   S L  CA L  L  G+ +H++   S  
Sbjct: 293 VAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRS-- 350

Query: 128 VIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
            ID  + + S LV M+  CG +++  ++F +     +  WN ++  Y+  G+ + +L +F
Sbjct: 351 CIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVF 410

Query: 187 KKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISG 241
             M   G  A +Y    ++  +         KD ++LF+ + +R  +      + C++  
Sbjct: 411 DDMIRSGETAPNYI--TLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDL 468

Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR--AVHAFALKACFS 299
               G+ E+  EV + M        ++    +L  C   G    GR  A   F L     
Sbjct: 469 LGRAGMEEQAYEVIQGM---PMRPSISVWGALLGACKMHGKTELGRIAAEKLFEL----D 521

Query: 300 KEISFNNTLL-DMYSKCGDLDGAIRVFEKM 328
            + S N+ LL +M++  G    A  + ++M
Sbjct: 522 PQDSGNHVLLSNMFASAGRWAEATDIRKEM 551


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 255/821 (31%), Positives = 419/821 (51%), Gaps = 64/821 (7%)

Query: 68   AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSL-EDGKKVHSIICESG 126
            AE GR  E   L ++M V    E  K D     ++L +C+    L ED    H  I   G
Sbjct: 307  AENGRRRETWGLLRSMAV----EGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGG 362

Query: 127  IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI---WNLLMHEYSKTGNFKESL 183
            +   + V+ + L+ MF  CG + + R +F K+ +    +   WN ++  Y+  G  KE+L
Sbjct: 363  L-DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEAL 421

Query: 184  YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK------------------------- 218
            +L   +Q  G+  +  TF   L   + + + R +                          
Sbjct: 422  FLLDSLQLQGVKPNCITFISSLGACSSLQDGRALHLLIHESGFDQEVSVANALVTMYGKC 481

Query: 219  ----DAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
                D+ KLF E++++D+ SWN  I+ +  +G +++ +++  +M   GF  +  T +T L
Sbjct: 482  GSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTAL 541

Query: 275  SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
            + C +  +L  G  +H   ++  +  +    + +++MY +CG LD A  +F ++    V+
Sbjct: 542  NSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVI 601

Query: 335  SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD---VH 391
             WT M+  Y + G     +  FR M+ EG++P    + +++  C  D  LE  +D   + 
Sbjct: 602  LWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLI-TCVADSGLEHFRDGVWIS 660

Query: 392  DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-------- 443
                E+ ++S   V+N+L++M+++  S++ A ++F++ P K +    TM+ A        
Sbjct: 661  SLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKGERGK 720

Query: 444  ---LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
               L LF  ML +  EP  VT+   + AC  LA     + +H      G+ ++  VAN +
Sbjct: 721  EAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGL 780

Query: 500  VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
            VDMY K G +  AR +FD    +++ +W  M   Y   G     +     M++ G  PD 
Sbjct: 781  VDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDS 840

Query: 560  VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
            V+F+S+L  C HSGL++E    F  MR E  I+P  +HY+C++DLL+R G L +A  FI 
Sbjct: 841  VTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIA 900

Query: 620  MMPVAPDAT--IWGSLLCGCR----IHHEVKLAEKVAEHVFELEP----DNTGYYVLLAN 669
             + V+  A+  +W +LL  CR         + A + A  V ++EP    D +  +V LAN
Sbjct: 901  RISVSSPASSPMWMALLGACRSLGNSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALAN 960

Query: 670  VYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKR 729
            + A +  W+E   +R+ ++ +GL+K PG S I +K +++ FVAG   HP  ++I + L+R
Sbjct: 961  ICAASGNWDEALSIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRR 1020

Query: 730  LRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
            L   M   GY   T     N  E +K   L  HSEKLA+AFG+L+ P G ++R+ KNLR 
Sbjct: 1021 LERAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRA 1080

Query: 790  CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
            CGDCH   K +S    REIV+RDSNRFHHF++G CSC  +W
Sbjct: 1081 CGDCHTAIKLISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 1121



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 165/600 (27%), Positives = 284/600 (47%), Gaps = 63/600 (10%)

Query: 81  KAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG------ 132
           +A+E  +   K+ +  D   Y  +L+ C  L  L  GK++H+ I ESG+++DD       
Sbjct: 105 QALERFHQMIKAGVEPDRLVYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGAR 164

Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
            LG+ LV M+  CG   E +R F+ I +  +F W  ++  Y   G   ++L  F +M   
Sbjct: 165 FLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKA 224

Query: 193 GIAADSYTFSCVLKCLAVV-------GNSRRVKD-------------------------A 220
           G+  D   F   L    ++       G  R+++D                         A
Sbjct: 225 GVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLA 284

Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
            +LFD L  R+V+SW  ++S +  NG   +   + + M   G   D   ++T+L+ C++ 
Sbjct: 285 KELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSR 344

Query: 281 GALMFGR-AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS---VVSW 336
           G L       H + +     +E      LL M+++CG +D A  +FEK+ + S   +  W
Sbjct: 345 GVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECW 404

Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
            +MI  YA  G    A+ L   +  +G++P+     S L AC+    L+ G+ +H  I E
Sbjct: 405 NAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSS---LQDGRALHLLIHE 461

Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------GALDLFVAM 450
           +     + V+NAL+ MY KCGS+ D+  +F++M  KD+ SWN+ I      G  D  + +
Sbjct: 462 SGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKL 521

Query: 451 LQNFEPDG-----VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
           L     +G     VT    L +C   A+L+ G  +H  I++ G  AD  VA+A+++MY +
Sbjct: 522 LDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGR 581

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           CG L  AR +F  +   D+I WT M+  Y   G     +  F  M   G++P  V+ +++
Sbjct: 582 CGGLDRAREIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNL 641

Query: 566 LYACSHSGLVDEGWR---FFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
           +   + SGL  E +R   + + + +E  +E +      ++++ S   +LS+A    +  P
Sbjct: 642 ITCVADSGL--EHFRDGVWISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNP 699



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/574 (24%), Positives = 257/574 (44%), Gaps = 92/574 (16%)

Query: 91  KSKIDT--KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDL 148
           +S +D   ++Y  +L+ C  L  L  GK++H+ I ESG+++DD                 
Sbjct: 7   RSGVDDACRSYARLLKECGRLGDLAQGKRLHAQIRESGLLLDD----------------- 49

Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL 208
                   + ++G  F+ N L+  Y K G                               
Sbjct: 50  --------REESGARFLGNCLVQMYGKCG------------------------------- 70

Query: 209 AVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
                  R  +A + FD ++ +++ SW  ++  Y   G+  + LE F +M+  G   D  
Sbjct: 71  -------RTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRL 123

Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACF---SKEIS----FNNTLLDMYSKCGDLDGA 321
               +L  C   G L  G+ +HA   ++      +E S      N L+ MY KCG  D A
Sbjct: 124 VYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 183

Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
            R F+ +  +++ SWTS++  Y   G+   A+  F  M++ G+EPD     + L+ C   
Sbjct: 184 QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL 243

Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
             LE G  +H  I++  + S L + NAL+ MY KCG +  A+ +F+ +  ++++SW  ++
Sbjct: 244 KRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILV 303

Query: 442 GAL----------DLFVAM-LQNFEPDGVTMACILPACASLAALERGREI-HGYILRHGI 489
                         L  +M ++  +PD V +  +L  C+S   L+    + H YI+  G+
Sbjct: 304 SVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGL 363

Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIP---AKDLISWTIMIAGYGMHGFGCDAIAT 546
             +  VA A++ M+ +CG +  AR +F+ +    A+ +  W  MI  Y   G   +A+  
Sbjct: 364 DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 423

Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
            + ++  G++P+ ++FIS L ACS    + +G R  +++ +E   + ++     +V +  
Sbjct: 424 LDSLQLQGVKPNCITFISSLGACSS---LQDG-RALHLLIHESGFDQEVSVANALVTMYG 479

Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
           + G+L ++ +    M    D   W S +     H
Sbjct: 480 KCGSLLDSAKLFSEM-AEKDLASWNSAIAAHSYH 512



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 154/610 (25%), Positives = 282/610 (46%), Gaps = 68/610 (11%)

Query: 81  KAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
           +A+E  +   K+ +  D   + + L +C  LK LEDG  +H  I +   +  D  +G+ L
Sbjct: 213 QALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQI-QDKPLDSDLEIGNAL 271

Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADS 198
           V M+  CG L   + +F+ ++   V  W +L+  +++ G  +E+  L + M   GI  D 
Sbjct: 272 VSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDK 331

Query: 199 YTFSCVLKC---------------------------------LAVVGNSRRVKDAHKLFD 225
                +L                                   L++     RV  A ++F+
Sbjct: 332 VLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFE 391

Query: 226 ELSDRD---VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
           +++D     +  WN MI+ Y   G +++ L +   +   G   +  T ++ L  C+   +
Sbjct: 392 KVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACS---S 448

Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
           L  GRA+H    ++ F +E+S  N L+ MY KCG L  + ++F +M E+ + SW S IA 
Sbjct: 449 LQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAA 508

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           ++  G  D  I+L   M  EG   +     + L++C     L+ G  +H+ I +   ++ 
Sbjct: 509 HSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEAD 568

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML- 451
             V++A+++MY +CG +  A  +F ++   D++ W  M+            ++ F +ML 
Sbjct: 569 TVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLH 628

Query: 452 QNFEPDGVTMACILPACASLAALERGRE---IHGYILRHGISADRNVANAIVDMYVKCGV 508
           +  +P GVT+  ++  C + + LE  R+   I       G+ ++  VAN++++M+ +   
Sbjct: 629 EGLKPTGVTLVNLI-TCVADSGLEHFRDGVWISSLAWESGLESETMVANSLIEMFSEFRS 687

Query: 509 LVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT-FNDMRQAGIEPDEVSFISVLY 567
           L  AR++FD  P K +   T M+A Y     G +A  T F  M   G+EP  V+ ++ + 
Sbjct: 688 LSQARAIFDRNPEKSVALHTTMLAAYVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMS 747

Query: 568 ACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC----MVDLLSRTGNLSEAYRFIEMMPV 623
           AC   GL D      +   +E   E  LE   C    +VD+  + G++  A R+I    +
Sbjct: 748 AC--GGLADPS---SSKRVHERARELGLESETCVANGLVDMYGKAGDVDTA-RYIFDRAL 801

Query: 624 APDATIWGSL 633
             + T W ++
Sbjct: 802 RRNVTTWNAM 811


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/681 (34%), Positives = 359/681 (52%), Gaps = 58/681 (8%)

Query: 208  LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
            L +   S  +  A KLFDE+  R+  +W  +ISG+   G +E    +F+EM   G   + 
Sbjct: 331  LTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQ 390

Query: 268  ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
             T+ +VL  C+    L  G+ VHA+ L+     ++   N++LD+Y KC   + A R+FE 
Sbjct: 391  YTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFEL 450

Query: 328  MGERSVVSWTSMIAGYAREGVFDGAIRLFR---------------GMVREGIE------- 365
            M E  VVSW  MI  Y R G  + ++ +FR               G+++ G E       
Sbjct: 451  MNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQL 510

Query: 366  -------PDVYAITSILHACACDGL--LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
                    +  A+T  +       L  +E+G+ +H  + +    S  ++ ++L++MY KC
Sbjct: 511  YCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKC 570

Query: 417  GSMADAESVFNQMPVK----------------DIVSWNTMIGA----------LDLFVAM 450
            G M  A  +   +P+                  IVSW +M+            L  F  M
Sbjct: 571  GRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLM 630

Query: 451  LQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
            ++     D  T+  I+ ACA+   LE GR +H Y+ + G   D  V ++++DMY K G L
Sbjct: 631  VRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSL 690

Query: 510  VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
              A  +F      +++ WT MI+GY +HG G  AI  F +M   GI P+EV+F+ VL AC
Sbjct: 691  DDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNAC 750

Query: 570  SHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATI 629
            SH+GL++EG R+F MM+    I P +EH   MVDL  R G+L++   FI    ++   ++
Sbjct: 751  SHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSV 810

Query: 630  WGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISR 689
            W S L  CR+H  V++ + V+E + ++ P + G YVLL+N+ A   +W+E  ++R  + +
Sbjct: 811  WKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQ 870

Query: 690  RGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALIN 749
            RG+KK PG SWI++K +++ FV G  SHP   +I S L  L   +K  GY    +  + +
Sbjct: 871  RGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLVMQD 930

Query: 750  ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIV 809
             +E + EV +  HSEKLA+ FGI+N      IR+ KNLR+C DCH   K+ S+   REI+
Sbjct: 931  VEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREII 990

Query: 810  LRDSNRFHHFKDGRCSCRGFW 830
            +RD +RFHHFK G CSC  +W
Sbjct: 991  VRDIHRFHHFKHGSCSCGDYW 1011



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 223/485 (45%), Gaps = 71/485 (14%)

Query: 62  KTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSK---IDTKTYCSILQLCADLKSLEDGKKV 118
            T+ +   I  F   G+ E     L+   ++K    +  T  S+L+ C+   +L+ GK V
Sbjct: 354 NTQTWTILISGFARAGSSEMVFN-LFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGV 412

Query: 119 HSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
           H+ +  +GI +D  VLG+ ++ +++ C   +   R+F  ++ G V  WN+++  Y + G+
Sbjct: 413 HAWMLRNGIDVDV-VLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGD 471

Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
            ++SL +F++                                      L  +DVVSWN +
Sbjct: 472 VEKSLDMFRR--------------------------------------LPYKDVVSWNTI 493

Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
           + G +  G     LE    M+  G      T    L   ++   +  GR +H   LK  F
Sbjct: 494 VDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGF 553

Query: 299 SKEISFNNTLLDMYSKCGDLD----------------GAIRVFEKMGERSVVSWTSMIAG 342
             +    ++L++MY KCG +D                G  RV  K  +  +VSW SM++G
Sbjct: 554 DSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSG 613

Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS 402
           Y   G ++  ++ FR MVRE +  D+  +T+I+ ACA  G+LE G+ VH Y+++   +  
Sbjct: 614 YVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRID 673

Query: 403 LYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML- 451
            YV ++L+DMY+K GS+ DA  VF Q    +IV W +MI           A+ LF  ML 
Sbjct: 674 AYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLN 733

Query: 452 QNFEPDGVTMACILPACASLAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLV 510
           Q   P+ VT   +L AC+    +E G R        + I+       ++VD+Y + G L 
Sbjct: 734 QGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLT 793

Query: 511 LARSL 515
             ++ 
Sbjct: 794 KTKNF 798



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 213/426 (50%), Gaps = 68/426 (15%)

Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
            +HA  +K    + ++  N LL +Y+K  ++  A ++F+++ +R+  +WT +I+G+AR G
Sbjct: 310 TLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAG 369

Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
             +    LFR M  +G  P+ Y ++S+L  C+ D  L++GK VH ++  N +   + + N
Sbjct: 370 SSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGN 429

Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFV--------- 448
           +++D+Y KC     AE +F  M   D+VSWN MIGA          LD+F          
Sbjct: 430 SILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVS 489

Query: 449 ------AMLQ-----------------NFEPDGVTMACILPACASLAALERGREIHGYIL 485
                  +LQ                   E   VT +  L   +SL+ +E GR++HG +L
Sbjct: 490 WNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVL 549

Query: 486 RHGISADRNVANAIVDMYVKCG-----VLVLARSLFDMI-----------PAKDLISWTI 529
           + G  +D  + +++V+MY KCG      ++L     D++           P   ++SW  
Sbjct: 550 KFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGS 609

Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
           M++GY  +G   D + TF  M +  +  D  +  +++ AC+++G+++ G    ++  Y  
Sbjct: 610 MVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFG---RHVHAYVQ 666

Query: 590 NIEPKLEHY--ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH----HEV 643
            I  +++ Y  + ++D+ S++G+L +A+  +      P+  +W S++ G  +H    H +
Sbjct: 667 KIGHRIDAYVGSSLIDMYSKSGSLDDAW-MVFRQSNEPNIVMWTSMISGYALHGQGMHAI 725

Query: 644 KLAEKV 649
            L E++
Sbjct: 726 GLFEEM 731


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 261/867 (30%), Positives = 431/867 (49%), Gaps = 87/867 (10%)

Query: 48  INPISASISKTLVC-KTKNYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCS---IL 103
           ++  S S+S    C +  N  +    F    +L    E L++S        T  S   +L
Sbjct: 45  LSKTSLSLSNPNPCLRPFNSTSPTQFFTSPQHLVSLSEPLFASRSLNTSLSTIASPFDLL 104

Query: 104 QLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKV 163
           +L       +  + VH+   +   + +D  LG+ L+  ++  G +++  +VF+ +    V
Sbjct: 105 RLSTRYGDPDLARAVHAQFLK---LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNV 161

Query: 164 FIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF---------------------- 201
             +  L+  +SK+    E++ LF  M   GI  + YTF                      
Sbjct: 162 VSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGI 221

Query: 202 -------SCVLKCLAVVGNSRR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
                  SCV  C A++G   +   +    +LF+E+ +RD+ SWN +IS  +     ++ 
Sbjct: 222 VVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEA 281

Query: 252 LEVFKEM-LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
            + F+ M L  G  VD  ++ T+L+ CA     M G+ +HA ALK      +S +++L+ 
Sbjct: 282 FDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIG 341

Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR---------------- 354
            Y+KCG  +    +FE M  R V++WT MI  Y   G+ D A+                 
Sbjct: 342 FYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAV 401

Query: 355 ---------------LFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDM 399
                          LF  M+ EG+E     +TSI+ AC      ++ + +  ++ +  +
Sbjct: 402 LAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGI 461

Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKD--IVSWNTMI------GALDLFVAML 451
            S+  +  AL+DMY +CG M DAE +F Q  +++       +MI      G L+  +++ 
Sbjct: 462 LSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLF 521

Query: 452 QNFEPDG------VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
            + + +G      V    IL  C S+   E G+++H + L+ G+  +  V NA V MY K
Sbjct: 522 HSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSK 581

Query: 506 CGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
           C  +  A  +F+ +  +D++SW  ++AG+ +H  G  A+  +  M +AGI+PD ++F  +
Sbjct: 582 CWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALI 641

Query: 566 LYACSHS--GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
           + A  H+   LVD     F  M  E NI+P LEHYA  + +L R G L EA + I  MP+
Sbjct: 642 ISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPL 701

Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
            PD  +W +LL  CRI+   +L +  A ++  +EP +   Y+L +N+Y+ + +W   +K+
Sbjct: 702 EPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKV 761

Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
           RE +  +G +K+P  SWI  + K++ F A   SHP  K I S L+ L LE  + GY P T
Sbjct: 762 REDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDT 821

Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
            + L   +E +K+  L  HS KLA  FGIL    G+ I++ KN+R+CGDCH   K++S  
Sbjct: 822 SFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIV 881

Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
            RR+I+LRD++ FH F DG+CSC  +W
Sbjct: 882 TRRKILLRDTSGFHWFIDGQCSCTDYW 908


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.137    0.418 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,718,325,430
Number of Sequences: 23463169
Number of extensions: 526547621
Number of successful extensions: 1443225
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9324
Number of HSP's successfully gapped in prelim test: 2606
Number of HSP's that attempted gapping in prelim test: 1209664
Number of HSP's gapped (non-prelim): 69953
length of query: 830
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 679
effective length of database: 8,816,256,848
effective search space: 5986238399792
effective search space used: 5986238399792
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 81 (35.8 bits)