BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047408
(830 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 1043 bits (2696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/808 (62%), Positives = 625/808 (77%), Gaps = 45/808 (5%)
Query: 67 NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
N ++ RFCE GNLE A+++L S K ID +T CS+LQLCAD KSL+DGK+V + I +G
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNG 124
Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLF 186
VID LGSKL M+ CGDLKE RVF+++ K WN+LM+E +K+G+F S+ LF
Sbjct: 125 FVIDSN-LGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 187 KKMQSLGIAADSYTFSCVLKCLAV------------------------VGNS-------- 214
KKM S G+ DSYTFSCV K + VGNS
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243
Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
+RV A K+FDE+++RDV+SWN +I+GY++NG+AEKGL VF +ML G +DLAT+V+V
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303
Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
+GCA+ + GRAVH+ +KACFS+E F NTLLDMYSKCGDLD A VF +M +RSVV
Sbjct: 304 AGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV 363
Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
S+TSMIAGYAREG+ A++LF M EGI PDVY +T++L+ CA LL+ GK VH++I
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------AL 444
KEND+ ++VSNALMDMYAKCGSM +AE VF++M VKDI+SWNT+IG AL
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 445 DLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDM 502
LF +L+ F PD T+AC+LPACASL+A ++GREIHGYI+R+G +DR+VAN++VDM
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
Y KCG L+LA LFD I +KDL+SWT+MIAGYGMHGFG +AIA FN MRQAGIE DE+SF
Sbjct: 544 YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 603
Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMP 622
+S+LYACSHSGLVDEGWRFFN+MR+EC IEP +EHYAC+VD+L+RTG+L +AYRFIE MP
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP 663
Query: 623 VAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKK 682
+ PDATIWG+LLCGCRIHH+VKLAEKVAE VFELEP+NTGYYVL+AN+YAEAEKWE+VK+
Sbjct: 664 IPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKR 723
Query: 683 LREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPK 742
LR++I +RGL+KNPGCSWIEIKG+VNIFVAG SS+P + IE+ L+++R M EGY P
Sbjct: 724 LRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPL 783
Query: 743 TRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
T+YALI+A+EMEKE ALCGHSEKLAMA GI++ G+ IRVTKNLRVCGDCHEMAKFMSK
Sbjct: 784 TKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSK 843
Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
RREIVLRDSNRFH FKDG CSCRGFW
Sbjct: 844 LTRREIVLRDSNRFHQFKDGHCSCRGFW 871
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 565 bits (1457), Expect = e-160, Method: Compositional matrix adjust.
Identities = 303/800 (37%), Positives = 469/800 (58%), Gaps = 50/800 (6%)
Query: 73 FCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVID 130
C G LE+AM++L S ++ ++ D + ++++LC ++ E+G KV+SI S +
Sbjct: 69 LCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL- 127
Query: 131 DGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM 189
GV LG+ + MFV G+L + VF K+ +F WN+L+ Y+K G F E++ L+ +M
Sbjct: 128 -GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 190 QSLG-IAADSYTFSCVLKCLAVVGNSRR-------------------------------- 216
+G + D YTF CVL+ + + R
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246
Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
VK A LFD + RD++SWN MISGY NG+ +GLE+F M L + DL T+ +V+S
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
C G GR +HA+ + F+ +IS N+L MY G A ++F +M + +VSW
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSW 366
Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
T+MI+GY + D AI +R M ++ ++PD + ++L ACA G L+ G ++H +
Sbjct: 367 TTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK 426
Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL----FVAML- 451
+ S + V+N L++MY+KC + A +F+ +P K+++SW ++I L L F A++
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIF 486
Query: 452 -----QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
+P+ +T+ L ACA + AL G+EIH ++LR G+ D + NA++DMYV+C
Sbjct: 487 LRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRC 546
Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
G + A S F+ KD+ SW I++ GY G G + F+ M ++ + PDE++FIS+L
Sbjct: 547 GRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLL 605
Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
CS S +V +G +F+ M + + P L+HYAC+VDLL R G L EA++FI+ MPV PD
Sbjct: 606 CGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPD 664
Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
+WG+LL CRIHH++ L E A+H+FEL+ + GYY+LL N+YA+ KW EV K+R
Sbjct: 665 PAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRM 724
Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
+ GL + GCSW+E+KGKV+ F++ HP K+I ++L+ +M G + +
Sbjct: 725 MKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESS 784
Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
++ E+ ++ CGHSE+ A+AFG++N G I VTKNL +C +CH+ KF+SKT RR
Sbjct: 785 SMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRR 844
Query: 807 EIVLRDSNRFHHFKDGRCSC 826
EI +RD+ FHHFKDG CSC
Sbjct: 845 EISVRDAEHFHHFKDGECSC 864
Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 216/420 (51%), Gaps = 22/420 (5%)
Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
+ G ANG E+ +++ M L VD V ++ C A G V++ AL +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
S + N L M+ + G+L A VF KM ER++ SW ++ GYA++G FD A+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 359 MVR-EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG 417
M+ G++PDVY +L C L GK+VH ++ + + V NAL+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 418 SMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILP 466
+ A +F++MP +DI+SWN MI L+LF AM + +PD +T+ ++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
AC L GR+IH Y++ G + D +V N++ MY+ G A LF + KD++S
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
WT MI+GY + AI T+ M Q ++PDE++ +VL AC+ G +D G
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL----- 420
Query: 587 YECNIEPKLEHYAC----MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
++ I+ +L Y ++++ S+ + +A +P + W S++ G R+++
Sbjct: 421 HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNR 479
Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/521 (27%), Positives = 243/521 (46%), Gaps = 52/521 (9%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSS----EKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
++N +G + + G ++AM LY K D T+ +L+ C + L GK+VH
Sbjct: 162 SWNVLVGGYAKQGYFDEAM-CLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHV 220
Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
+ G +D V+ + L+ M+V CGD+K R +F+++ + WN ++ Y + G
Sbjct: 221 HVVRYGYELDIDVVNA-LITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------- 221
E L LF M+ L + D T + V+ ++G+ R +D H
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 222 -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
KLF + +D+VSW MISGY N + +K ++ ++ M D
Sbjct: 340 QMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399
Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
T+ VLS CA G L G +H A+KA + N L++MYSKC +D A+ +F +
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI 459
Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
++V+SWTS+IAG A+ R M + ++P+ +T+ L ACA G L GK
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGK 518
Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----- 443
++H ++ + ++ NAL+DMY +CG M A S FN KD+ SWN ++
Sbjct: 519 EIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERG 577
Query: 444 -----LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVAN 497
++LF M+++ PD +T +L C+ + +G + +G++ +
Sbjct: 578 QGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYA 637
Query: 498 AIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMH 537
+VD+ + G L A +P D W ++ +H
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIH 678
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 564 bits (1454), Expect = e-159, Method: Compositional matrix adjust.
Identities = 320/816 (39%), Positives = 453/816 (55%), Gaps = 99/816 (12%)
Query: 110 KSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG---RRVFNKIDNGKVFIW 166
K++ K +H + GI+ + L S L+ +++ G L R F D G V+ W
Sbjct: 39 KTISQVKLIHQKLLSFGILTLN--LTSHLISTYISVGCLSHAVSLLRRFPPSDAG-VYHW 95
Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA----------------- 209
N L+ Y G + LYLF M SL D+YTF V K
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 210 -------VVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
VGN+ R + DA K+FDE+S DVVSWN +I Y G + LE+
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 255 FKEMLN-LGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYS 313
F M N G D T+V VL CA+ G G+ +H FA+ + + + N L+DMY+
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 314 KCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF----------------- 356
KCG +D A VF M + VVSW +M+AGY++ G F+ A+RLF
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 357 ------------------RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY----- 393
R M+ GI+P+ + S+L CA G L GK++H Y
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 394 --IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK--DIVSWNTMIG------- 442
+++N V N L+DMYAKC + A ++F+ + K D+V+W MIG
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 443 ---ALDLFVAMLQ---NFEPDGVTMACILPACASLAALERGREIHGYILRHGISA-DRNV 495
AL+L M + P+ T++C L ACASLAAL G++IH Y LR+ +A V
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
+N ++DMY KCG + AR +FD + AK+ ++WT ++ GYGMHG+G +A+ F++MR+ G
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
+ D V+ + VLYACSHSG++D+G +FN M+ + P EHYAC+VDLL R G L+ A
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635
Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
R IE MP+ P +W + L CRIH +V+L E AE + EL ++ G Y LL+N+YA A
Sbjct: 636 RLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAG 695
Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIE-IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
+W++V ++R + +G+KK PGCSW+E IKG FV G +HPHAK+I +L +
Sbjct: 696 RWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV-GDKTHPHAKEIYQVLLDHMQRI 754
Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
K GY P+T +AL + D+ EK+ L HSEKLA+A+GIL P G IR+TKNLRVCGDCH
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814
Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
+MS+ +I+LRDS+RFHHFK+G CSC+G+W
Sbjct: 815 TAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 212 bits (540), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 159/539 (29%), Positives = 257/539 (47%), Gaps = 98/539 (18%)
Query: 95 DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
D T+ + + C ++ S+ G+ H++ +G I + +G+ LV M+ C L + R+V
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGF-ISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS-LGIAADSYTFSCVLK------- 206
F+++ V WN ++ Y+K G K +L +F +M + G D+ T VL
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 207 --------CLAV---------VGNSR--------RVKDAHKLFDELSDRDVVSWNCM--- 238
C AV VGN + +A+ +F +S +DVVSWN M
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 239 --------------------------------ISGYIANGVAEKGLEVFKEMLNLGFNVD 266
ISGY G+ + L V ++ML+ G +
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN---------NTLLDMYSKCGD 317
T+++VLSGCA+ GALM G+ +H +A+K + ++ N N L+DMY+KC
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIK--YPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 318 LDGAIRVFEKMG--ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVYAITS 373
+D A +F+ + ER VV+WT MI GY++ G + A+ L M E + P+ + I+
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 374 ILHACACDGLLEIGKDVHDYIKENDMQS-SLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
L ACA L IGK +H Y N + L+VSN L+DMYAKCGS++DA VF+ M K
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 433 DIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIH 481
+ V+W +++ AL +F M + F+ DGVT+ +L AC+ +++G E
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 482 GYI-LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
+ G+S +VD+ + G L A L + +P + + W ++ +HG
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 133/296 (44%), Gaps = 49/296 (16%)
Query: 93 KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVI------DDGVLGSKLVFMFVTCG 146
K + T S+L CA + +L GK++H + I + D+ ++ ++L+ M+ C
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 147 DLKEGRRVFNKIDNGK--VFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYTFS 202
+ R +F+ + + V W +++ YS+ G+ ++L L +M + +++T S
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 203 CVLKCLAVVGNSR---------------------------------RVKDAHKLFDELSD 229
C L A + R + DA +FD +
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541
Query: 230 RDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAV 289
++ V+W +++GY +G E+ L +F EM +GF +D T++ VL C++ G M + +
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSG--MIDQGM 599
Query: 290 HAF-ALKACF--SKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIA 341
F +K F S L+D+ + G L+ A+R+ E+M E V W + ++
Sbjct: 600 EYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK----TYCSILQLCADLKSLEDGKKVHS 120
+ IG + + G+ KA+E+L + T+ T L CA L +L GK++H+
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
+ + + L+ M+ CG + + R VF+ + W LM Y G +
Sbjct: 502 YALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGE 561
Query: 181 ESLYLFKKMQSLGIAADSYTFSCVL 205
E+L +F +M+ +G D T VL
Sbjct: 562 EALGIFDEMRRIGFKLDGVTLLVVL 586
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 560 bits (1442), Expect = e-158, Method: Compositional matrix adjust.
Identities = 295/791 (37%), Positives = 457/791 (57%), Gaps = 52/791 (6%)
Query: 87 YSSEKSKIDTKTY----CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
+ SE++ I Y +L+ C+ LK L +++ ++ ++G+ + +KLV +F
Sbjct: 24 FLSERNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLY-QEHFFQTKLVSLF 79
Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
G + E RVF ID+ +++ ++ ++K + ++L F +M+ + Y F+
Sbjct: 80 CRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFT 139
Query: 203 CVLKC--------------------------LAVVG------NSRRVKDAHKLFDELSDR 230
+LK A+ G R+V +A K+FD + +R
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
D+VSWN +++GY NG+A LE+ K M T+V+VL + + G+ +H
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
+A+++ F ++ + L+DMY+KCG L+ A ++F+ M ER+VVSW SMI Y +
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
A+ +F+ M+ EG++P ++ LHACA G LE G+ +H E + ++ V N+L+
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLI 379
Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFEPDGV 459
MY KC + A S+F ++ + +VSWN MI AL+ F M + +PD
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
T ++ A A L+ + IHG ++R + + V A+VDMY KCG +++AR +FDM+
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
+ + +W MI GYG HGFG A+ F +M++ I+P+ V+F+SV+ ACSHSGLV+ G
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGL 559
Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
+ F MM+ +IE ++HY MVDLL R G L+EA+ FI MPV P ++G++L C+I
Sbjct: 560 KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619
Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
H V AEK AE +FEL PD+ GY+VLLAN+Y A WE+V ++R + R+GL+K PGCS
Sbjct: 620 HKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679
Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
+EIK +V+ F +G ++HP +KKI + L++L +K GY P T L +++ KE L
Sbjct: 680 MVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDV-KEQLL 738
Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
HSEKLA++FG+LN AG TI V KNLRVC DCH K++S REIV+RD RFHHF
Sbjct: 739 STHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHF 798
Query: 820 KDGRCSCRGFW 830
K+G CSC +W
Sbjct: 799 KNGACSCGDYW 809
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 192/416 (46%), Gaps = 39/416 (9%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
++N + + + G A+E++ S E K T S+L + L+ + GK++H
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 123 CESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
SG D V + + LV M+ CG L+ R++F+ + V WN ++ Y + N KE
Sbjct: 263 MRSGF--DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKL------------------ 223
++ +F+KM G+ + L A +G+ R + HKL
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 224 --------------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
F +L R +VSWN MI G+ NG L F +M + D T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
V+V++ A + +H +++C K + L+DMY+KCG + A +F+ M
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
ER V +W +MI GY G A+ LF M + I+P+ S++ AC+ GL+E G
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 390 VHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
+KEN ++ S+ A++D+ + G + +A QMPVK V+ + M+GA
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 555 bits (1431), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/811 (38%), Positives = 462/811 (56%), Gaps = 48/811 (5%)
Query: 66 YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
+N+ I F + G +A+E +SK+ D T+ S+++ CA L E G V+ I
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
+ G D +G+ LV M+ G L R+VF+++ + WN L+ YS G ++E+L
Sbjct: 134 DMGFE-SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 184 YLFKKMQSLGIAADSYTFSCVLKC---LAVVGNS-------------------------- 214
++ ++++ I DS+T S VL L VV
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252
Query: 215 ---RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
RR DA ++FDE+ RD VS+N MI GY+ + E+ + +F E L+ F DL T+
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVS 311
Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
+VL C + L + ++ + LKA F E + N L+D+Y+KCGD+ A VF M +
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
VSW S+I+GY + G A++LF+ M+ + D ++ L+ GK +H
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 431
Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA---LDLFV 448
++ + L VSNAL+DMYAKCG + D+ +F+ M D V+WNT+I A F
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491
Query: 449 AMLQ--------NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
LQ PD T LP CASLAA G+EIH +LR G ++ + NA++
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 551
Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
+MY KCG L + +F+ + +D+++WT MI YGM+G G A+ TF DM ++GI PD V
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611
Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
FI+++YACSHSGLVDEG F M+ I+P +EHYAC+VDLLSR+ +S+A FI+
Sbjct: 612 VFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQA 671
Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
MP+ PDA+IW S+L CR +++ AE+V+ + EL PD+ GY +L +N YA KW++V
Sbjct: 672 MPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKV 731
Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
+R+ + + + KNPG SWIE+ V++F +G S P ++ I L+ L M +EGY
Sbjct: 732 SLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYI 791
Query: 741 PKTRYALIN-ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
P R N +E EK +CGHSE+LA+AFG+LN G ++V KNLRVCGDCHE+ K
Sbjct: 792 PDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKL 851
Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
+SK REI++RD+NRFH FKDG CSC+ W
Sbjct: 852 ISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 172/612 (28%), Positives = 297/612 (48%), Gaps = 61/612 (9%)
Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK-VFIWNLL 169
+L + +++H+++ G+ D G KL+ + + VF ++ K V++WN +
Sbjct: 19 NLNELRRIHALVISLGLDSSDFFSG-KLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSI 77
Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------------------- 209
+ +SK G F E+L + K++ ++ D YTF V+K A
Sbjct: 78 IRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGF 137
Query: 210 ----VVGN------SRR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
VGN SR + A ++FDE+ RD+VSWN +ISGY ++G E+ LE++ E
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197
Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
+ N D T+ +VL N + G+ +H FALK+ + + NN L+ MY K
Sbjct: 198 LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRR 257
Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
A RVF++M R VS+ +MI GY + + + ++R+F + + +PD+ ++S+L A
Sbjct: 258 PTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRA 316
Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
C L + K +++Y+ + V N L+D+YAKCG M A VFN M KD VSW
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 438 NTMIG----------ALDLF-VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILR 486
N++I A+ LF + M+ + D +T ++ LA L+ G+ +H ++
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK 436
Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
GI D +V+NA++DMY KCG + + +F + D ++W +I+ G +
Sbjct: 437 SGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQV 496
Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLL 605
MR++ + PD +F+ L C+ G ++R+ E +L+ ++++
Sbjct: 497 TTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF--GYESELQIGNALIEMY 554
Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE-----PDN 660
S+ G L + R E M D W ++ ++ E EK E ++E PD+
Sbjct: 555 SKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDS 610
Query: 661 TGYYVLLANVYA 672
V +A +YA
Sbjct: 611 V---VFIAIIYA 619
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 248/507 (48%), Gaps = 18/507 (3%)
Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSD-RDV 232
S + N E + + SLG+ + + FS K + + R + +F +S ++V
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDF-FSG--KLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 233 VSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF 292
WN +I + NG+ + LE + ++ + D T +V+ CA G V+
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
L F ++ N L+DMYS+ G L A +VF++M R +VSW S+I+GY+ G ++ A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
+ ++ + I PD + ++S+L A +++ G+ +H + ++ + S + V+N L+ M
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMI-GALDL---------FVAMLQNFEPDGVTMA 462
Y K DA VF++M V+D VS+NTMI G L L F+ L F+PD +T++
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVS 311
Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
+L AC L L + I+ Y+L+ G + V N ++D+Y KCG ++ AR +F+ + K
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
D +SW +I+GY G +A+ F M + D ++++ ++ + + G +
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGL 430
Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
+ + I L ++D+ ++ G + ++ + M D W +++ C +
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGD 489
Query: 643 VKLAEKVAEHV--FELEPDNTGYYVLL 667
+V + E+ PD + V L
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTL 516
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 459 VTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
V+ I A +S + L R IH ++ G+ + + ++D Y + S+F
Sbjct: 5 VSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRR 64
Query: 519 I-PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD- 576
+ PAK++ W +I + +G +A+ + +R++ + PD+ +F SV+ AC +GL D
Sbjct: 65 VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDA 122
Query: 577 EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
E + E L +VD+ SR G L+ A + + MPV D W SL+ G
Sbjct: 123 EMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISG 181
Query: 637 ----------CRIHHEVK 644
I+HE+K
Sbjct: 182 YSSHGYYEEALEIYHELK 199
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 554 bits (1427), Expect = e-156, Method: Compositional matrix adjust.
Identities = 296/797 (37%), Positives = 447/797 (56%), Gaps = 59/797 (7%)
Query: 93 KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
K D + ++L+ ADL+ +E GK++H+ + + G +D + + LV ++ CGD
Sbjct: 94 KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY 153
Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKC---- 207
+VF++I WN L+ ++ +L F+ M + S+T S V C
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 208 -----------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCM 238
+A+ G ++ + L RD+V+WN +
Sbjct: 214 MPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
+S N + LE +EM+ G D T+ +VL C++ L G+ +HA+ALK
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 299 SKEISF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
E SF + L+DMY C + RVF+ M +R + W +MIAGY++ A+ LF
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 358 GMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
GM G+ + + ++ AC G + +H ++ + + +V N LMDMY++
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 417 GSMADAESVFNQMPVKDIVSWNTMIGALD---------LFVAMLQNFE------------ 455
G + A +F +M +D+V+WNTMI L + +QN E
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 456 -PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
P+ +T+ ILP+CA+L+AL +G+EIH Y +++ ++ D V +A+VDMY KCG L ++R
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGL 574
+FD IP K++I+W ++I YGMHG G +AI M G++P+EV+FISV ACSHSG+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 575 VDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD-ATIWGSL 633
VDEG R F +M+ + +EP +HYAC+VDLL R G + EAY+ + MMP + A W SL
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
L RIH+ +++ E A+++ +LEP+ +YVLLAN+Y+ A W++ ++R + +G++
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753
Query: 694 KNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEM 753
K PGCSWIE +V+ FVAG SSHP ++K+ L+ L M++EGY P T L N +E
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEED 813
Query: 754 EKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDS 813
EKE+ LCGHSEKLA+AFGILN G IRV KNLRVC DCH KF+SK REI+LRD
Sbjct: 814 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDV 873
Query: 814 NRFHHFKDGRCSCRGFW 830
RFH FK+G CSC +W
Sbjct: 874 RRFHRFKNGTCSCGDYW 890
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 219/432 (50%), Gaps = 32/432 (7%)
Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
W ++ + + + + + + +M+ LG D +L A+ + G+ +HA
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 295 KACFSKE-ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
K + + ++ NTL+++Y KCGD +VF+++ ER+ VSW S+I+ ++ A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 354 RLFRGMVREGIEPDVYAITSILHACA----CDGLLEIGKDVHDY-IKENDMQSSLYVSNA 408
FR M+ E +EP + + S++ AC+ +GL+ +GK VH Y +++ ++ S ++ N
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM-MGKQVHAYGLRKGELNS--FIINT 241
Query: 409 LMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL----DLFVAM-------LQNFEPD 457
L+ MY K G +A ++ + +D+V+WNT++ +L L A+ L+ EPD
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRN--VANAIVDMYVKCGVLVLARSL 515
T++ +LPAC+ L L G+E+H Y L++G S D N V +A+VDMY C ++ R +
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ-AGIEPDEVSFISVLYACSHSGL 574
FD + + + W MIAGY + +A+ F M + AG+ + + V+ AC SG
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 575 VD--EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
E F + R ++ ++D+ SR G + A R M D W +
Sbjct: 421 FSRKEAIHGFVVKR---GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNT 476
Query: 633 LLCGCRI--HHE 642
++ G HHE
Sbjct: 477 MITGYVFSEHHE 488
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 237/484 (48%), Gaps = 59/484 (12%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSS--EKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
+N + C+ L +A+E L E + D T S+L C+ L+ L GK++H+
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
++G + ++ +GS LV M+ C + GRRVF+ + + K+ +WN ++ YS+ + KE+
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 388
Query: 183 LYLFKKM-QSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH-------------------- 221
L LF M +S G+ A+S T + V+ G R + H
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448
Query: 222 ------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV---- 265
++F ++ DRD+V+WN MI+GY+ + E L + +M NL V
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 508
Query: 266 -------DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
+ T++T+L CA AL G+ +HA+A+K + +++ + L+DMY+KCG L
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568
Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
+ +VF+++ +++V++W +I Y G AI L R M+ +G++P+ S+ AC
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
Query: 379 ACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMP--VKDIV 435
+ G+++ G + +K + ++ S ++D+ + G + +A + N MP
Sbjct: 629 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 688
Query: 436 SWNTMIGA------LDLFVAMLQN---FEPDGVTMACILPACASLAAL-ERGREIHGYIL 485
+W++++GA L++ QN EP+ + +L S A L ++ E+ +
Sbjct: 689 AWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMK 748
Query: 486 RHGI 489
G+
Sbjct: 749 EQGV 752
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 152/311 (48%), Gaps = 26/311 (8%)
Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
L F R H + L+A + D+ S + GA +F RS W ++
Sbjct: 22 LPFSRHKHPYLLRATPTSATE------DVASA---VSGAPSIFISQS-RSPEWWIDLLRS 71
Query: 343 YAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI-KENDMQS 401
R + A+ + M+ GI+PD YA ++L A A +E+GK +H ++ K
Sbjct: 72 KVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVD 131
Query: 402 SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML 451
S+ V+N L+++Y KCG VF+++ ++ VSWN++I AL+ F ML
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 452 -QNFEPDGVTMACILPACASLA---ALERGREIHGYILRHGISADRNVANAIVDMYVKCG 507
+N EP T+ ++ AC++L L G+++H Y LR G + + N +V MY K G
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG 250
Query: 508 VLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLY 567
L ++ L +DL++W +++ + +A+ +M G+EPDE + SVL
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310
Query: 568 ACSHSGLVDEG 578
ACSH ++ G
Sbjct: 311 ACSHLEMLRTG 321
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 551 bits (1420), Expect = e-156, Method: Compositional matrix adjust.
Identities = 303/813 (37%), Positives = 469/813 (57%), Gaps = 50/813 (6%)
Query: 66 YNAEIGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
+N IG + G A+ + ++ E + ++ ++L+ CA L+ + G ++HS++
Sbjct: 150 WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV 209
Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI-DNGKVFIWNLLMHEYSKTGNFKES 182
+ G G + + LV M+ DL RR+F+ + G +WN ++ YS +G E+
Sbjct: 210 KLGYH-STGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 268
Query: 183 LYLFKKMQSLGIAADSYTF--------------------SCVLK----------CLAVVG 212
L LF++M G A +SYT + VLK C A++
Sbjct: 269 LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIA 328
Query: 213 NSRR---VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
R + A ++ ++++ DVV+WN +I GY+ N + ++ LE F +M+ G D +
Sbjct: 329 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 388
Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
M ++++ L+ G +HA+ +K + + NTL+DMYSKC R F +M
Sbjct: 389 MTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH 448
Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
++ ++SWT++IAGYA+ A+ LFR + ++ +E D + SIL A + + I K+
Sbjct: 449 DKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKE 508
Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------- 442
+H +I + ++ + N L+D+Y KC +M A VF + KD+VSW +MI
Sbjct: 509 IHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGN 567
Query: 443 ---ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
A++LF M++ D V + CIL A ASL+AL +GREIH Y+LR G + ++A A
Sbjct: 568 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA 627
Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
+VDMY CG L A+++FD I K L+ +T MI YGMHG G A+ F+ MR + PD
Sbjct: 628 VVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPD 687
Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
+SF+++LYACSH+GL+DEG F +M +E +EP EHY C+VD+L R + EA+ F+
Sbjct: 688 HISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV 747
Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWE 678
+MM P A +W +LL CR H E ++ E A+ + ELEP N G VL++NV+AE +W
Sbjct: 748 KMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 807
Query: 679 EVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE- 737
+V+K+R K+ G++K+PGCSWIE+ GKV+ F A SHP +K+I L + +++RE
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREV 867
Query: 738 GYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMA 797
GY T++ L N DE EK L GHSE++A+A+G+L P +R+TKNLRVC DCH
Sbjct: 868 GYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFC 927
Query: 798 KFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
K +SK RR+IV+RD+NRFHHF+ G CSC W
Sbjct: 928 KLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 194/378 (51%), Gaps = 13/378 (3%)
Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
K + + G + DA K+FDE+ DR +WN MI Y++NG L ++ M G +
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
L++ +L CA + G +H+ +K + N L+ MY+K DL A R+F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 326 EKMGER-SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
+ E+ V W S+++ Y+ G + LFR M G P+ Y I S L AC
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 385 EIGKDVH-DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG- 442
++GK++H +K + S LYV NAL+ MY +CG M AE + QM D+V+WN++I
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 443 ---------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
AL+ F M+ + D V+M I+ A L+ L G E+H Y+++HG ++
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420
Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
V N ++DMY KC + F + KDLISWT +IAGY + +A+ F D+ +
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480
Query: 553 AGIEPDEVSFISVLYACS 570
+E DE+ S+L A S
Sbjct: 481 KRMEIDEMILGSILRASS 498
Score = 149 bits (376), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 171/352 (48%), Gaps = 25/352 (7%)
Query: 253 EVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF-NNTLLDM 311
E F+ + N + VL C A+ GR +H+ K S E+ F L+ M
Sbjct: 66 EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125
Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
Y KCG LD A +VF++M +R+ +W +MI Y G A+ L+ M EG+ + +
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
++L ACA + G ++H + + S+ ++ NAL+ MYAK ++ A +F+
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 432 K-DIVSWNTMIGA----------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGRE 479
K D V WN+++ + L+LF M + P+ T+ L AC + + G+E
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 480 IHGYILRHGI-SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHG 538
IH +L+ S++ V NA++ MY +CG + A + + D+++W +I GY +
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACS-----------HSGLVDEGW 579
+A+ F+DM AG + DEVS S++ A H+ ++ GW
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 526 bits (1356), Expect = e-148, Method: Compositional matrix adjust.
Identities = 287/773 (37%), Positives = 439/773 (56%), Gaps = 51/773 (6%)
Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
++ + C +L+S K +H+ + S I + + +KLV ++ G++ R F+ I N
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSK-QIQNVCISAKLVNLYCYLGNVALARHTFDHIQN 114
Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKK-MQSLGIAADSYTFSCVLK------------C 207
V+ WNL++ Y + GN E + F M S G+ D TF VLK C
Sbjct: 115 RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHC 174
Query: 208 LAV-----------------VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
LA+ + V +A LFDE+ RD+ SWN MISGY +G A++
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLD 310
L + + + D T+V++LS C G G +H++++K E+ +N L+D
Sbjct: 235 ALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290
Query: 311 MYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYA 370
+Y++ G L +VF++M R ++SW S+I Y AI LF+ M I+PD
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 350
Query: 371 ITSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
+ S+ + G + + V + +++ + + NA++ MYAK G + A +VFN +
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 430 PVKDIVSWNTMIG----------ALDLFVAMLQNFE--PDGVTMACILPACASLAALERG 477
P D++SWNT+I A++++ M + E + T +LPAC+ AL +G
Sbjct: 411 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
++HG +L++G+ D V ++ DMY KCG L A SLF IP + + W +IA +G H
Sbjct: 471 MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFH 530
Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
G G A+ F +M G++PD ++F+++L ACSHSGLVDEG F MM+ + I P L+H
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELE 657
Y CMVD+ R G L A +FI+ M + PDA+IWG+LL CR+H V L + +EH+FE+E
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650
Query: 658 PDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSH 717
P++ GY+VLL+N+YA A KWE V ++R +GL+K PG S +E+ KV +F G +H
Sbjct: 651 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 710
Query: 718 PHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPA 777
P +++ L L+ ++K GY P R+ L + ++ EKE L HSE+LA+AF ++ PA
Sbjct: 711 PMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPA 770
Query: 778 GQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
TIR+ KNLRVCGDCH + KF+SK REI++RDSNRFHHFK+G CSC +W
Sbjct: 771 KTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 235/487 (48%), Gaps = 47/487 (9%)
Query: 95 DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
D +T+ S+L+ C +++ DG K+H + + G + D V S L+ ++ + R +
Sbjct: 152 DYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAAS-LIHLYSRYKAVGNARIL 207
Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL--------------------GI 194
F+++ + WN ++ Y ++GN KE+L L ++++ G+
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGV 267
Query: 195 AADSYTFSCVLKCLAVVGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
SY+ L+ V N R++D K+FD + RD++SWN +I Y N
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNE 327
Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL-KACFSKEISFN 305
+ + +F+EM D T++++ S + G + R+V F L K F ++I+
Sbjct: 328 QPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG 387
Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-I 364
N ++ MY+K G +D A VF + V+SW ++I+GYA+ G AI ++ M EG I
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
+ S+L AC+ G L G +H + +N + ++V +L DMY KCG + DA S
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAA 473
+F Q+P + V WNT+I A+ LF ML + +PD +T +L AC+
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL 567
Query: 474 LERGREIHGYI-LRHGISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWTIMI 531
++ G+ + +GI+ +VDMY + G L A + + M D W ++
Sbjct: 568 VDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALL 627
Query: 532 AGYGMHG 538
+ +HG
Sbjct: 628 SACRVHG 634
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 197/415 (47%), Gaps = 39/415 (9%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICE 124
++NA I +C+ GN ++A+ + S+ +D+ T S+L C + G +HS +
Sbjct: 218 SWNAMISGYCQSGNAKEALTL--SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 125 SGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLY 184
G+ + + +KL+ ++ G L++ ++VF+++ + WN ++ Y ++
Sbjct: 276 HGLE-SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 185 LFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR---------------------------- 216
LF++M+ I D T + L+ +G+ R
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394
Query: 217 -----VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATM 270
V A +F+ L + DV+SWN +ISGY NG A + +E++ M G + T
Sbjct: 395 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454
Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
V+VL C+ GAL G +H LK ++ +L DMY KCG L+ A+ +F ++
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
+ V W ++IA + G + A+ LF+ M+ EG++PD ++L AC+ GL++ G+
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574
Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
+ ++ + + SL ++DMY + G + A M ++ D W ++ A
Sbjct: 575 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 163/399 (40%), Gaps = 74/399 (18%)
Query: 81 KAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
+A+ + S+I D T S+ + + L + + V G ++D +G+ +
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAAD 197
V M+ G + R VFN + N V WN ++ Y++ G E++ ++ M+ G IAA+
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 198 SYTFSCVLKCLAVVGNSR--------------------------------RVKDAHKLFD 225
T+ VL + G R R++DA LF
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
++ + V WN +I+ + +G EK + +FKEML+ G D T VT+LS C++ G +
Sbjct: 511 QIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 570
Query: 286 GR-AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYA 344
G+ + + ++DMY + G L+ A++ + M
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM---------------- 614
Query: 345 REGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
++PD ++L AC G +++GK +++ E + + Y
Sbjct: 615 ------------------SLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 656
Query: 405 VSNALMDMYAKCG---SMADAESVFNQMPVKDIVSWNTM 440
L +MYA G + + S+ + ++ W++M
Sbjct: 657 -HVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 511 bits (1315), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/691 (37%), Positives = 401/691 (58%), Gaps = 47/691 (6%)
Query: 187 KKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
K++ + I S + + +++ N + + +A LF L V++W +I +
Sbjct: 25 KQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQS 84
Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
+ K L F EM G D +VL C L FG +VH F ++ ++ N
Sbjct: 85 LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144
Query: 307 TLLDMYSK-----------------------CGD-------------LDGAIRVFEKMGE 330
L++MY+K GD +D RVFE M
Sbjct: 145 ALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR 204
Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
+ VVS+ ++IAGYA+ G+++ A+R+ R M ++PD + ++S+L + + GK++
Sbjct: 205 KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEI 264
Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
H Y+ + S +Y+ ++L+DMYAK + D+E VF+++ +D +SWN+++
Sbjct: 265 HGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRY 324
Query: 443 --ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
AL LF M+ +P V + ++PACA LA L G+++HGY+LR G ++ +A+A+
Sbjct: 325 NEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASAL 384
Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
VDMY KCG + AR +FD + D +SWT +I G+ +HG G +A++ F +M++ G++P++
Sbjct: 385 VDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQ 444
Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
V+F++VL ACSH GLVDE W +FN M + +LEHYA + DLL R G L EAY FI
Sbjct: 445 VAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFIS 504
Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
M V P ++W +LL C +H ++LAEKVAE +F ++ +N G YVL+ N+YA +W+E
Sbjct: 505 KMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKE 564
Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
+ KLR ++ ++GL+K P CSWIE+K K + FV+G SHP KI LK + +M++EGY
Sbjct: 565 MAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGY 624
Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
T L + DE K L GHSE+LA+AFGI+N G TIRVTKN+R+C DCH KF
Sbjct: 625 VADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKF 684
Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
+SK REI++RD++RFHHF G CSC +W
Sbjct: 685 ISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 45/317 (14%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
+YN I + + G E A+ ++ + K D+ T S+L + ++ + GK++H +
Sbjct: 209 SYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYV 268
Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
GI D +GS LV M+ +++ RVF+++ WN L+ Y + G + E+
Sbjct: 269 IRKGI-DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327
Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR--------------------------- 215
L LF++M + + + FS V+ A +
Sbjct: 328 LRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDM 387
Query: 216 -----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
+K A K+FD ++ D VSW +I G+ +G + + +F+EM G +
Sbjct: 388 YSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAF 447
Query: 271 VTVLSGCANCGAL-----MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
V VL+ C++ G + F + L ++E+ + D+ + G L+ A
Sbjct: 448 VAVLTACSHVGLVDEAWGYFNSMTKVYGL----NQELEHYAAVADLLGRAGKLEEAYNFI 503
Query: 326 EKM-GERSVVSWTSMIA 341
KM E + W+++++
Sbjct: 504 SKMCVEPTGSVWSTLLS 520
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 238/570 (41%), Positives = 361/570 (63%), Gaps = 12/570 (2%)
Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
T+L C L+ GR VHA L++ F +I NTLL+MY+KCG L+ A +VFEKM +R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
V+WT++I+GY++ A+ F M+R G P+ + ++S++ A A + G +H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
+ + S+++V +AL+D+Y + G M DA+ VF+ + ++ VSWN +I
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 443 -ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIV 500
AL+LF ML++ F P + A + AC+S LE+G+ +H Y+++ G N ++
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 501 DMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEV 560
DMY K G + AR +FD + +D++SW ++ Y HGFG +A+ F +MR+ GI P+E+
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364
Query: 561 SFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEM 620
SF+SVL ACSHSGL+DEGW ++ +M+ + I P+ HY +VDLL R G+L+ A RFIE
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423
Query: 621 MPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEV 680
MP+ P A IW +LL CR+H +L AEHVFEL+PD+ G +V+L N+YA +W +
Sbjct: 424 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDA 483
Query: 681 KKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF 740
++R+K+ G+KK P CSW+EI+ +++FVA HP ++I + + ++K GY
Sbjct: 484 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 543
Query: 741 PKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFM 800
P T + +++ D+ E+EV L HSEK+A+AF +LN P G TI + KN+RVCGDCH K
Sbjct: 544 PDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLA 603
Query: 801 SKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
SK REI++RD+NRFHHFKDG CSC+ +W
Sbjct: 604 SKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 193/383 (50%), Gaps = 36/383 (9%)
Query: 95 DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
D + Y ++L+ C K L G+ VH+ I +S I D V+G+ L+ M+ CG L+E R+V
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQS-IFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV---- 210
F K+ W L+ YS+ ++L F +M G + + +T S V+K A
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 211 --------------------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGY 242
VG++ + DA +FD L R+ VSWN +I+G+
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237
Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
EK LE+F+ ML GF + ++ C++ G L G+ VHA+ +K+ K +
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG-EKLV 296
Query: 303 SF-NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
+F NTLLDMY+K G + A ++F+++ +R VVSW S++ YA+ G A+ F M R
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
GI P+ + S+L AC+ GLL+ G ++ +K++ + + ++D+ + G +
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 422 AESVFNQMPVKDIVS-WNTMIGA 443
A +MP++ + W ++ A
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNA 439
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 186/369 (50%), Gaps = 14/369 (3%)
Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
+++A K+F+++ RD V+W +ISGY + L F +ML G++ + T+ +V+
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
A G +H F +K F + + LLD+Y++ G +D A VF+ + R+ VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
++IAG+AR + A+ LF+GM+R+G P ++ S+ AC+ G LE GK VH Y+ +
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD----------L 446
+ + + N L+DMYAK GS+ DA +F+++ +D+VSWN+++ A
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 447 FVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVK 505
F M + P+ ++ +L AC+ L+ G + + + GI + +VD+ +
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410
Query: 506 CGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
G L A + +P + + W ++ MH + + ++PD+
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMH--KNTELGAYAAEHVFELDPDDPGPHV 468
Query: 565 VLYACSHSG 573
+LY SG
Sbjct: 469 ILYNIYASG 477
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 75/373 (20%)
Query: 115 GKKVHSIICESGIVIDDGV-LGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEY 173
G ++H + G D V +GS L+ ++ G + + + VF+ +++ WN L+ +
Sbjct: 180 GHQLHGFCVKCGF--DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237
Query: 174 SKTGNFKESLYLFKKMQSLGIAADSYTFSCVL------------------------KCLA 209
++ +++L LF+ M G ++++ + K +A
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 210 VVGN--------SRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
GN S + DA K+FD L+ RDVVSWN +++ Y +G ++ + F+EM +
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
G + + ++VL+ C++ G L G + K E T++D+ + GDL+ A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
+R E+M IEP ++L+AC
Sbjct: 418 LRFIEEM----------------------------------PIEPTAAIWKALLNACRMH 443
Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI-----VS 436
E+G +++ E D L ++YA G DA V +M + S
Sbjct: 444 KNTELGAYAAEHVFELDPDDP-GPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 502
Query: 437 WNTMIGALDLFVA 449
W + A+ +FVA
Sbjct: 503 WVEIENAIHMFVA 515
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust.
Identities = 283/821 (34%), Positives = 449/821 (54%), Gaps = 63/821 (7%)
Query: 70 IGRFCEVGNLEKAMEVLYSSEKSKI---DTKTYCSILQLCADLKSLEDGKKVHSIICESG 126
I R G+L A+ L + I D+ T+ S+L+ C + GK VH+ + E
Sbjct: 33 ILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFD 92
Query: 127 IVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN-GK--VFIWNLLMHEYSKTGNFKESL 183
I D VL + L+ ++ GD + VF + GK V W+ +M Y G +++
Sbjct: 93 IE-PDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLA---VVGNSR------------------------- 215
+F + LG+ + Y ++ V++ + VG R
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
++A+K+FD++S+ +VV+W MI+ + G + + F +M+ GF D T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC---GDLDGAIRVFE 326
+ +V S CA L G+ +H++A+++ ++ +L+DMY+KC G +D +VF+
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFD 329
Query: 327 KMGERSVVSWTSMIAGYARE-GVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLL 384
+M + SV+SWT++I GY + + AI LF M+ +G +EP+ + +S AC
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL 444
+GK V + + S+ V+N+++ M+ K M DA+ F + K++VS+NT +
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 445 DLFVAMLQNFE-----------PDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
+ Q F+ T A +L A++ ++ +G +IH +++ G+S ++
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
V NA++ MY KCG + A +F+ + +++ISWT MI G+ HGF + TFN M +
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
G++P+EV+++++L ACSH GLV EGWR FN M + I+PK+EHYACMVDLL R G L++
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
A+ FI MP D +W + L CR+H +L + A + EL+P+ Y+ L+N+YA
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689
Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
A KWEE ++R K+ R L K GCSWIE+ K++ F G ++HP+A +I L RL E
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITE 749
Query: 734 MKREGYFPKTRYALINADEMEKEVA----LCGHSEKLAMAFGILNLPAGQTIRVTKNLRV 789
+KR GY P T L +E E L HSEK+A+AFG+++ + +RV KNLRV
Sbjct: 750 IKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRV 809
Query: 790 CGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
CGDCH K++S + REIVLRD NRFHHFKDG+CSC +W
Sbjct: 810 CGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 179 bits (454), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 139/583 (23%), Positives = 270/583 (46%), Gaps = 38/583 (6%)
Query: 134 LGSKLVFMFVTCGDLKEGRRVFNKIDNGKV-----FIWNLLMHEYSKTGNFKESLYLFKK 188
+ +L+ + GDL+ + + + ++ L+ + +F+ + +
Sbjct: 28 VADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHAR 87
Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
+ I DS ++ ++ + G+S + +D + RDVVSW+ M++ Y NG
Sbjct: 88 LIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRE 147
Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNT 307
++VF E L LG + V+ C+N + GR F +K F ++ +
Sbjct: 148 LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS 207
Query: 308 LLDMYSKC-GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
L+DM+ K + A +VF+KM E +VV+WT MI + G AIR F MV G E
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC---GSMADAE 423
D + ++S+ ACA L +GK +H + + + + S L+DMYAKC GS+ D
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCR 325
Query: 424 SVFNQMPVKDIVSWNTMIG-----------ALDLFVAMLQ--NFEPDGVTMACILPACAS 470
VF++M ++SW +I A++LF M+ + EP+ T + AC +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 471 LAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIM 530
L+ G+++ G + G++++ +VAN+++ M+VK + A+ F+ + K+L+S+
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 531 IAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM---MRY 587
+ G + A +++ + + +F S+L ++ G + +G + + +
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH-HEVKLA 646
CN +P ++ + S+ G++ A R M + W S++ G H +++
Sbjct: 506 SCN-QPVCN---ALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVL 560
Query: 647 EKVAEHVFE-LEPDNTGYYVLL---ANVYAEAEKWEEVKKLRE 685
E + + E ++P+ Y +L ++V +E W + E
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 277/784 (35%), Positives = 435/784 (55%), Gaps = 51/784 (6%)
Query: 93 KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
++D + S+L++ A L G+++H + G +DD +G+ LV ++ + K+GR
Sbjct: 90 EMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGF-LDDVSVGTSLVDTYMKGSNFKDGR 148
Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
+VF+++ V W L+ Y++ E L LF +MQ+ G +S+TF+ L LA G
Sbjct: 149 KVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208
Query: 213 NSRR--------------------------------VKDAHKLFDELSDRDVVSWNCMIS 240
R V+ A LFD+ + VV+WN MIS
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSK 300
GY ANG+ + L +F M + ++ +V+ CAN L F +H +K F
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 301 EISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
+ + L+ YSKC + A+R+F+++G +VVSWT+MI+G+ + + A+ LF M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
R+G+ P+ + + IL A E VH + + + + S V AL+D Y K G +
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 420 ADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPAC 468
+A VF+ + KDIV+W+ M+ A+ +F + + +P+ T + IL C
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 469 ASL-AALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
A+ A++ +G++ HG+ ++ + + V++A++ MY K G + A +F KDL+SW
Sbjct: 505 AATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSW 564
Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
MI+GY HG A+ F +M++ ++ D V+FI V AC+H+GLV+EG ++F++M
Sbjct: 565 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 624
Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
+C I P EH +CMVDL SR G L +A + IE MP +TIW ++L CR+H + +L
Sbjct: 625 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGR 684
Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
AE + ++P+++ YVLL+N+YAE+ W+E K+R+ ++ R +KK PG SWIE+K K
Sbjct: 685 LAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKT 744
Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
F+AG SHP +I L+ L +K GY P T Y L + D+ KE L HSE+LA
Sbjct: 745 YSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLA 804
Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF-KDGRCSC 826
+AFG++ P G + + KNLRVCGDCH + K ++K REIV+RDSNRFHHF DG CSC
Sbjct: 805 IAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSC 864
Query: 827 RGFW 830
FW
Sbjct: 865 GDFW 868
Score = 203 bits (516), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 234/462 (50%), Gaps = 33/462 (7%)
Query: 207 CLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVD 266
C V +SR + +AH LFD+ RD S+ ++ G+ +G ++ +F + LG +D
Sbjct: 34 CFGTVSSSR-LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMD 92
Query: 267 LATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
+ +VL A +FGR +H +K F ++S +L+D Y K + +VF+
Sbjct: 93 CSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD 152
Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
+M ER+VV+WT++I+GYAR + D + LF M EG +P+ + + L A +G+
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 387 GKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---- 442
G VH + +N + ++ VSN+L+++Y KCG++ A +F++ VK +V+WN+MI
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 443 ------ALDLFVAMLQNF-EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
AL +F +M N+ + A ++ CA+L L ++H ++++G D+N+
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 496 ANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
A++ Y KC ++ A LF I +++SWT MI+G+ + +A+ F++M++ G
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 555 IEPDEVSFISVLYACS-------HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
+ P+E ++ +L A H+ +V + N E ++D +
Sbjct: 393 VRPNEFTYSVILTALPVISPSEVHAQVV------------KTNYERSSTVGTALLDAYVK 440
Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
G + EA + + D W ++L G E + A K+
Sbjct: 441 LGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETEAAIKM 481
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 495 bits (1274), Expect = e-139, Method: Compositional matrix adjust.
Identities = 262/688 (38%), Positives = 400/688 (58%), Gaps = 48/688 (6%)
Query: 189 MQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
M G +D Y+ S L +A + + ++ A K+FDE+ + +WN +I Y +
Sbjct: 53 MIRTGTFSDPYSAS-KLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDP 111
Query: 249 EKGLEVFKEMLNLGF-NVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
+ F +M++ + T ++ A +L G+++H A+K+ ++ N+
Sbjct: 112 VLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANS 171
Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
L+ Y CGDLD A +VF + E+ VVSW SMI G+ ++G D A+ LF+ M E ++
Sbjct: 172 LIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKAS 231
Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF- 426
+ +L ACA LE G+ V YI+EN + +L ++NA++DMY KCGS+ DA+ +F
Sbjct: 232 HVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFD 291
Query: 427 ------------------------------NQMPVKDIVSWNTMIGA----------LDL 446
N MP KDIV+WN +I A L +
Sbjct: 292 AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIV 351
Query: 447 F--VAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYV 504
F + + +N + + +T+ L ACA + ALE GR IH YI +HGI + +V +A++ MY
Sbjct: 352 FHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYS 411
Query: 505 KCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFIS 564
KCG L +R +F+ + +D+ W+ MI G MHG G +A+ F M++A ++P+ V+F +
Sbjct: 412 KCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 471
Query: 565 VLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
V ACSH+GLVDE F+ M I P+ +HYAC+VD+L R+G L +A +FIE MP+
Sbjct: 472 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 531
Query: 625 PDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLR 684
P ++WG+LL C+IH + LAE + ELEP N G +VLL+N+YA+ KWE V +LR
Sbjct: 532 PSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELR 591
Query: 685 EKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR 744
+ + GLKK PGCS IEI G ++ F++G ++HP ++K+ L + ++K GY P+
Sbjct: 592 KHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEIS 651
Query: 745 YAL--INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSK 802
L I +EM KE +L HSEKLA+ +G+++ A + IRV KNLRVCGDCH +AK +S+
Sbjct: 652 QVLQIIEEEEM-KEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQ 710
Query: 803 TARREIVLRDSNRFHHFKDGRCSCRGFW 830
REI++RD RFHHF++G+CSC FW
Sbjct: 711 LYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 237/520 (45%), Gaps = 84/520 (16%)
Query: 99 YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM--FVTCGDLKEGRRVFN 156
+ S+++ C L+ L K+ H + +G D SKL M + L+ R+VF+
Sbjct: 33 HISLIERCVSLRQL---KQTHGHMIRTG-TFSDPYSASKLFAMAALSSFASLEYARKVFD 88
Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA-ADSYTFSCVLKCLAVVGNSR 215
+I F WN L+ Y+ + S++ F M S + YTF ++K A V +
Sbjct: 89 EIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLS 148
Query: 216 RVKDAH--------------------------------KLFDELSDRDVVSWNCMISGYI 243
+ H K+F + ++DVVSWN MI+G++
Sbjct: 149 LGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV 208
Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
G +K LE+FK+M + TMV VLS CA L FGR V ++ + + ++
Sbjct: 209 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
N +LDMY+KCG ++ A R+F+ M E+ V+WT+M+ GYA ++ A + M ++
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 364 I--------------EP------------------DVYAITSILHACACDGLLEIGKDVH 391
I +P + + S L ACA G LE+G+ +H
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG--------- 442
YIK++ ++ + +V++AL+ MY+KCG + + VFN + +D+ W+ MIG
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI-HGYILRHGISADRNVANAI 499
A+D+F M + N +P+GVT + AC+ ++ + H +GI + I
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMHG 538
VD+ + G L A + +P S W ++ +H
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 184/414 (44%), Gaps = 71/414 (17%)
Query: 98 TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
T+ +++ A++ SL G+ +H + +S V D + + L+ + +CGDL +VF
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSA-VGSDVFVANSLIHCYFSCGDLDSACKVFTT 191
Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN---S 214
I V WN +++ + + G+ ++L LFKKM+S + A T VL A + N
Sbjct: 192 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
Query: 215 RRV-----------------------------KDAHKLFDELSD---------------- 229
R+V +DA +LFD + +
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311
Query: 230 ---------------RDVVSWNCMISGYIANGVAEKGLEVFKEM-LNLGFNVDLATMVTV 273
+D+V+WN +IS Y NG + L VF E+ L ++ T+V+
Sbjct: 312 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 371
Query: 274 LSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV 333
LS CA GAL GR +H++ K + L+ MYSKCGDL+ + VF + +R V
Sbjct: 372 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431
Query: 334 VSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDY 393
W++MI G A G + A+ +F M ++P+ T++ AC+ GL++ + +
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 491
Query: 394 IKEND---MQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
++ N + Y ++D+ + G + A MP+ S W ++GA
Sbjct: 492 MESNYGIVPEEKHYA--CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 66 YNAEIGRFCEVGNLEKAMEVLYS---SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
+NA I + + G +A+ V + + K++ T S L CA + +LE G+ +HS I
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
+ GI ++ V S L+ M+ CGDL++ R VFN ++ VF+W+ ++ + G E+
Sbjct: 392 KKHGIRMNFHVT-SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL-SDRDVVS----WNC 237
+ +F KMQ + + TF+ V + G V +A LF ++ S+ +V + C
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTG---LVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 238 MISGYIANGVAEKGLEVFKEM 258
++ +G EK ++ + M
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAM 528
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 495 bits (1274), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/783 (34%), Positives = 422/783 (53%), Gaps = 54/783 (6%)
Query: 94 IDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRR 153
I TY + + L + H+ I G D +L +KL G + R
Sbjct: 18 ISKNTYLDFFKRSTSISHL---AQTHAQIILHGFRNDISLL-TKLTQRLSDLGAIYYARD 73
Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYTFSCVLKCLAVVG 212
+F + VF++N+LM +S + SL +F + +S + +S T++ + +
Sbjct: 74 IFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFR 133
Query: 213 NSR--------------------------------RVKDAHKLFDELSDRDVVSWNCMIS 240
+ R RV+DA K+FD + ++D + WN MIS
Sbjct: 134 DDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMIS 193
Query: 241 GYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFALKA-CF 298
GY N + + ++VF++++N +D T++ +L A L G +H+ A K C+
Sbjct: 194 GYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY 253
Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
S + + +YSKCG + +F + + +V++ +MI GY G + ++ LF+
Sbjct: 254 SHDYVLTG-FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
++ G + S++ G L + +H Y +++ S VS AL +Y+K
Sbjct: 313 LMLSGARLRSSTLVSLV---PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNE 369
Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPA 467
+ A +F++ P K + SWN MI A+ LF M ++ F P+ VT+ CIL A
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
CA L AL G+ +H + + V+ A++ MY KCG + AR LFD++ K+ ++W
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489
Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
MI+GYG+HG G +A+ F +M +GI P V+F+ VLYACSH+GLV EG FN M +
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
EP ++HYACMVD+L R G+L A +FIE M + P +++W +LL CRIH + LA
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLAR 609
Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
V+E +FEL+PDN GY+VLL+N+++ + + +R+ +R L K PG + IEI
Sbjct: 610 TVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETP 669
Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLA 767
++F +G SHP K+I L++L +M+ GY P+T AL + +E E+E+ + HSE+LA
Sbjct: 670 HVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLA 729
Query: 768 MAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCR 827
+AFG++ G IR+ KNLRVC DCH + K +SK R IV+RD+NRFHHFKDG CSC
Sbjct: 730 IAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCG 789
Query: 828 GFW 830
+W
Sbjct: 790 DYW 792
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/539 (28%), Positives = 259/539 (48%), Gaps = 63/539 (11%)
Query: 86 LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG-----VLGSKLVF 140
L S K ++ TY + + + G+ +H G + DG +LGS +V
Sbjct: 109 LRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIH------GQAVVDGCDSELLLGSNIVK 162
Query: 141 MFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK------------- 187
M+ +++ R+VF+++ +WN ++ Y K + ES+ +F+
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222
Query: 188 -------------------KMQSLGIAADSYTFSCVLK-CLAVVGNSRRVKDAHKLFDEL 227
++ SL Y+ VL +++ ++K LF E
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF 282
Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
D+V++N MI GY +NG E L +FKE++ G + +T+V+++ G LM
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV---PVSGHLMLIY 339
Query: 288 AVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREG 347
A+H + LK+ F S + L +YSK +++ A ++F++ E+S+ SW +MI+GY + G
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 348 VFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSN 407
+ + AI LFR M + P+ IT IL ACA G L +GK VHD ++ D +SS+YVS
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 408 ALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEP 456
AL+ MYAKCGS+A+A +F+ M K+ V+WNTMI AL++F ML + P
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP 519
Query: 457 DGVTMACILPACASLAALERGREI-HGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
VT C+L AC+ ++ G EI + I R+G +VD+ + G L A
Sbjct: 520 TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQF 579
Query: 516 FDMIPAKDLIS-WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSG 573
+ + + S W ++ +H A + + ++PD V + VL + HS
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGY-HVLLSNIHSA 635
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 137/319 (42%), Gaps = 52/319 (16%)
Query: 66 YNAEIGRFCEVGNLEKAM----EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
YNA I + G E ++ E++ S +++ + T S++ + L + +H
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSG--ARLRSSTLVSLVPVSGHLMLI---YAIHGY 344
Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
+S + + + L ++ +++ R++F++ + WN ++ Y++ G ++
Sbjct: 345 CLKSNF-LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVG----------------------------- 212
++ LF++MQ + + T +C+L A +G
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 213 ---NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
+ +A +LFD ++ ++ V+WN MISGY +G ++ L +F EMLN G T
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523
Query: 270 MVTVLSGCANCGAL-----MFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
+ VL C++ G + +F +H + F + ++D+ + G L A++
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYG----FEPSVKHYACMVDILGRAGHLQRALQF 579
Query: 325 FEKMG-ERSVVSWTSMIAG 342
E M E W +++
Sbjct: 580 IEAMSIEPGSSVWETLLGA 598
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
++NA I + + G E A+ + +KS+ T IL CA L +L GK VH ++
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 123 ----CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGN 178
ES I + ++G M+ CG + E RR+F+ + WN ++ Y G
Sbjct: 447 RSTDFESSIYVSTALIG-----MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501
Query: 179 FKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDR-----DVV 233
+E+L +F +M + GI TF CVL + G VK+ ++F+ + R V
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAG---LVKEGDEIFNSMIHRYGFEPSVK 558
Query: 234 SWNCMISGYIANGVAEKGLEVFKEM 258
+ CM+ G ++ L+ + M
Sbjct: 559 HYACMVDILGRAGHLQRALQFIEAM 583
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/642 (40%), Positives = 371/642 (57%), Gaps = 49/642 (7%)
Query: 205 LKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
+K + + + V A K+FDE+ +R+V+ N MI Y+ NG +G++VF M
Sbjct: 78 VKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVR 137
Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
D T VL C+ G ++ GR +H A K S + N L+ MY KCG L A V
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
++M R VVSW S++ GYA+ FD A+ + R M I D + S+L A
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA------- 250
Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
V + EN M YV DM+ K G K +VSWN MIG
Sbjct: 251 -----VSNTTTENVM----YVK----DMFFKMGK-------------KSLVSWNVMIGVY 284
Query: 443 --------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
A++L+ M FEPD V++ +LPAC +AL G++IHGYI R + +
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
+ NA++DMY KCG L AR +F+ + ++D++SWT MI+ YG G GCDA+A F+ ++ +
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
G+ PD ++F++ L ACSH+GL++EG F +M I P+LEH ACMVDLL R G + E
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464
Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
AYRFI+ M + P+ +WG+LL CR+H + + A+ +F+L P+ +GYYVLL+N+YA+
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524
Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
A +WEEV +R + +GLKKNPG S +E+ ++ F+ G SHP + +I L L +
Sbjct: 525 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKK 584
Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLP-----AGQTIRVTKNLR 788
MK GY P + AL + +E +KE L HSEKLA+ F ++N + TIR+TKNLR
Sbjct: 585 MKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLR 644
Query: 789 VCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
+CGDCH AK +S+ REI++RD+NRFH F+ G CSC +W
Sbjct: 645 ICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 189/430 (43%), Gaps = 80/430 (18%)
Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
+L D+++L + VHS I + + LG KL+ + + D+ R+VF++I
Sbjct: 47 QVLDTYPDIRTL---RTVHSRIILEDLRCNSS-LGVKLMRAYASLKDVASARKVFDEIPE 102
Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSRRV 217
V I N+++ Y G + E + +F M + D YTF CVLK C + R++
Sbjct: 103 RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162
Query: 218 -----------------------------KDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
+A + DE+S RDVVSWN ++ GY N
Sbjct: 163 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF 222
Query: 249 EKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTL 308
+ LEV +EM ++ + D TM ++L +N T
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSN-------------------------TTTE 257
Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
MY K +F KMG++S+VSW MI Y + + A+ L+ M +G EPD
Sbjct: 258 NVMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDA 309
Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
+ITS+L AC L +GK +H YI+ + +L + NAL+DMYAKCG + A VF
Sbjct: 310 VSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN 369
Query: 429 MPVKDIVSWNTMIGALDL------FVAMLQNFE-----PDGVTMACILPACASLAALERG 477
M +D+VSW MI A VA+ + PD + L AC+ LE G
Sbjct: 370 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Query: 478 REIHGYILRH 487
R + H
Sbjct: 430 RSCFKLMTDH 439
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 182/355 (51%), Gaps = 8/355 (2%)
Query: 93 KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
+ D T+ +L+ C+ ++ G+K+H + G+ +G+ LV M+ CG L E R
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS-STLFVGNGLVSMYGKCGFLSEAR 195
Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA--V 210
V +++ V WN L+ Y++ F ++L + ++M+S+ I+ D+ T + +L ++
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 211 VGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
N VKD +F ++ + +VSWN MI Y+ N + + +E++ M GF D ++
Sbjct: 256 TENVMYVKD---MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
+VL C + AL G+ +H + + + N L+DMY+KCG L+ A VFE M
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDV 390
R VVSWT+MI+ Y G A+ LF + G+ PD A + L AC+ GLLE G+
Sbjct: 373 RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 432
Query: 391 HDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
+ ++ + L ++D+ + G + +A M ++ + W ++GA
Sbjct: 433 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 162/348 (46%), Gaps = 24/348 (6%)
Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
R VH+ + S L+ Y+ D+ A +VF+++ ER+V+ MI Y
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
G + +++F M + PD Y +L AC+C G + IG+ +H + + S+L+V
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACILP 466
N L+ MY KCG +++A V ++M +D+VSWN+++ V QN D
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLV------VGYAQNQRFDD-------- 224
Query: 467 ACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS 526
ALE RE+ + H ++ A+ + + + V + +F + K L+S
Sbjct: 225 ------ALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYV--KDMFFKMGKKSLVS 276
Query: 527 WTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
W +MI Y + +A+ ++ M G EPD VS SVL AC + + G + +
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
+ + P L ++D+ ++ G L +A E M + D W +++
Sbjct: 337 RK-KLIPNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMI 382
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 5/151 (3%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKS---KIDTKTYCSILQLCADLKSLEDGKKVHSI 121
++N IG + + +A+E LYS ++ + D + S+L C D +L GKK+H
Sbjct: 276 SWNVMIGVYMKNAMPVEAVE-LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334
Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
I E +I + +L + L+ M+ CG L++ R VF + + V W ++ Y +G +
Sbjct: 335 I-ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD 393
Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
++ LF K+Q G+ DS F L + G
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAG 424
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/624 (37%), Positives = 378/624 (60%), Gaps = 14/624 (2%)
Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
A ++FD+L + WN +I GY N + L ++ M + D T +L C+
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 280 CGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE--KMGERSVVSWT 337
L GR VHA + F ++ N L+ +Y+KC L A VFE + ER++VSWT
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
++++ YA+ G A+ +F M + ++PD A+ S+L+A C L+ G+ +H + +
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
++ + +L MYAKCG +A A+ +F++M +++ WN MI A+D+F
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 448 VAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
M+ ++ PD +++ + ACA + +LE+ R ++ Y+ R D +++A++DM+ KC
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
G + AR +FD +D++ W+ MI GYG+HG +AI+ + M + G+ P++V+F+ +L
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD 626
AC+HSG+V EGW FFN M + I P+ +HYAC++DLL R G+L +AY I+ MPV P
Sbjct: 432 MACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 627 ATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREK 686
T+WG+LL C+ H V+L E A+ +F ++P NTG+YV L+N+YA A W+ V ++R +
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550
Query: 687 ISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYA 746
+ +GL K+ GCSW+E++G++ F G SHP ++IE ++ + +K G+ +
Sbjct: 551 MKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610
Query: 747 LINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARR 806
L + ++ E E LC HSE++A+A+G+++ P G +R+TKNLR C +CH K +SK R
Sbjct: 611 LHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDR 670
Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
EIV+RD+NRFHHFKDG CSC +W
Sbjct: 671 EIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 209 bits (531), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 231/468 (49%), Gaps = 47/468 (10%)
Query: 116 KKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSK 175
K++H+ + G+ G L +KL+ + GD+ R+VF+ + ++F WN ++ YS+
Sbjct: 38 KQIHARLLVLGLQFS-GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96
Query: 176 TGNFKESLYLFKKMQSLGIAADSYTFSCVLKC---------------------------- 207
+F+++L ++ MQ ++ DS+TF +LK
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 208 ----LAVVGNSRRVKDAHKLFD--ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNL 261
+A+ RR+ A +F+ L +R +VSW ++S Y NG + LE+F +M +
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
D +V+VL+ L GR++HA +K E +L MY+KCG + A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
+F+KM +++ W +MI+GYA+ G AI +F M+ + + PD +ITS + ACA
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
G LE + +++Y+ +D + +++S+AL+DM+AKCGS+ A VF++ +D+V W+ MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 442 ----------GALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGIS 490
A+ L+ AM + P+ VT +L AC + G + H I+
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKIN 456
Query: 491 ADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMIAGYGMH 537
+ ++D+ + G L A + +P + ++ W +++ H
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 180/352 (51%), Gaps = 15/352 (4%)
Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
L+ S GD+ A +VF+ + + W ++I GY+R F A+ ++ M + PD
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
+ +L AC+ L++G+ VH + + ++V N L+ +YAKC + A +VF
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 428 QMPV--KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAAL 474
+P+ + IVSW ++ AL++F M + + +PD V + +L A L L
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238
Query: 475 ERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGY 534
++GR IH +++ G+ + ++ ++ MY KCG + A+ LFD + + +LI W MI+GY
Sbjct: 239 KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298
Query: 535 GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPK 594
+G+ +AI F++M + PD +S S + AC+ G +++ + + +
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG-RSDYRDD 357
Query: 595 LEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLA 646
+ + ++D+ ++ G++ E R + + D +W +++ G +H + A
Sbjct: 358 VFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
Score = 162 bits (411), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 197/415 (47%), Gaps = 38/415 (9%)
Query: 66 YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
+NA I + + + A+ + + + +++ D+ T+ +L+ C+ L L+ G+ VH+ +
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN--KIDNGKVFIWNLLMHEYSKTGNFKE 181
G D V + L+ ++ C L R VF + + W ++ Y++ G E
Sbjct: 147 RLGFDADVFV-QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 182 SLYLFKKMQSLGIAADSYTFSCVLK---CLAVVGNSR----------------------- 215
+L +F +M+ + + D VL CL + R
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 216 ------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
+V A LFD++ +++ WN MISGY NG A + +++F EM+N D +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
+ + +S CA G+L R+++ + ++ + ++ ++ L+DM++KCG ++GA VF++
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
+R VV W++MI GY G AI L+R M R G+ P+ +L AC G++ G
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445
Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
+ + ++ + ++D+ + G + A V MPV+ V+ W ++ A
Sbjct: 446 FFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 17/263 (6%)
Query: 388 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI------ 441
K +H + +Q S ++ L+ + G + A VF+ +P I WN +I
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 442 ----GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
AL ++ M L PD T +L AC+ L+ L+ GR +H + R G AD V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 497 NAIVDMYVKCGVLVLARSLFD--MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
N ++ +Y KC L AR++F+ +P + ++SWT +++ Y +G +A+ F+ MR+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
++PD V+ +SVL A + + +G ++++ IEP L + + ++ G ++
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQVAT 275
Query: 614 AYRFIEMMPVAPDATIWGSLLCG 636
A + M +P+ +W +++ G
Sbjct: 276 AKILFDKMK-SPNLILWNAMISG 297
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 141/315 (44%), Gaps = 40/315 (12%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK----TYCSILQLCADLKSLEDGKKVHS 120
++ A + + + G +A+E+ S+ K+D K S+L L+ L+ G+ +H+
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIF--SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
+ + G+ I+ +L S L M+ CG + + +F+K+ + + +WN ++ Y+K G +
Sbjct: 247 SVVKMGLEIEPDLLIS-LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR------------------------ 216
E++ +F +M + + D+ + + + A VG+ +
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
V+ A +FD DRDVV W+ MI GY +G A + + +++ M G + +
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
T + +L C + G + G + + ++D+ + G LD A V + M
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 329 G-ERSVVSWTSMIAG 342
+ V W ++++
Sbjct: 486 PVQPGVTVWGALLSA 500
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 99/223 (44%), Gaps = 7/223 (3%)
Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
++IH +L G+ + ++ G + AR +FD +P + W +I GY +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH 597
DA+ +++M+ A + PD +F +L ACS + G RF + + + +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG-RFVHAQVFRLGFDADVFV 156
Query: 598 YACMVDLLSRTGNLSEAYRFIEMMPVAPDATI--WGSLLCGCRIHHEVKLAEKVAEHV-- 653
++ L ++ L A E +P+ P+ TI W +++ + E A ++ +
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPL-PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNP 696
+++PD +L N + + ++ + + + + GL+ P
Sbjct: 216 MDVKPDWVALVSVL-NAFTCLQDLKQGRSIHASVVKMGLEIEP 257
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/627 (39%), Positives = 378/627 (60%), Gaps = 11/627 (1%)
Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
R+ K ++ LF ++ +N +I+G++ N + + L++F + G + T VL
Sbjct: 59 RQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVL 118
Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
C + G +H+ +K F+ +++ +LL +YS G L+ A ++F+++ +RSVV
Sbjct: 119 KACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVV 178
Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
+WT++ +GY G AI LF+ MV G++PD Y I +L AC G L+ G+ + Y+
Sbjct: 179 TWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA----------L 444
+E +MQ + +V L+++YAKCG M A SVF+ M KDIV+W+TMI +
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 445 DLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMY 503
+LF+ MLQ N +PD ++ L +CASL AL+ G I RH + +ANA++DMY
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMY 358
Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
KCG + +F + KD++ I+G +G + A F + GI PD +F+
Sbjct: 359 AKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFL 418
Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
+L C H+GL+ +G RFFN + ++ +EHY CMVDL R G L +AYR I MP+
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPM 478
Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
P+A +WG+LL GCR+ + +LAE V + + LEP N G YV L+N+Y+ +W+E ++
Sbjct: 479 RPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEV 538
Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
R+ ++++G+KK PG SWIE++GKV+ F+A SHP + KI + L+ L EM+ G+ P T
Sbjct: 539 RDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTT 598
Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
+ + +E EKE L HSEKLA+A G+++ GQ IRV KNLRVCGDCHE+ K +SK
Sbjct: 599 EFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKI 658
Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
RREIV+RD+NRFH F +G CSC +W
Sbjct: 659 TRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 209/425 (49%), Gaps = 45/425 (10%)
Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------ 207
+F+ +F++N L++ + F E+L LF ++ G+ +TF VLK
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 208 --------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
L++ S R+ DAHKLFDE+ DR VV+W + SG
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
Y +G + +++FK+M+ +G D +V VLS C + G L G + + + K
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
TL+++Y+KCG ++ A VF+ M E+ +V+W++MI GYA I LF M++
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
E ++PD ++I L +CA G L++G+ I ++ ++L+++NAL+DMYAKCG+MA
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 422 AESVFNQMPVKDIVSWNTMI------GALDLFVAMLQNFE-----PDGVTMACILPACAS 470
VF +M KDIV N I G + L A+ E PDG T +L C
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 471 LAALERG-REIHGYILRHGISADRNVANAIVDMYVKCGVLVLA-RSLFDMIPAKDLISWT 528
++ G R + + + +VD++ + G+L A R + DM + I W
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 529 IMIAG 533
+++G
Sbjct: 487 ALLSG 491
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 191/417 (45%), Gaps = 37/417 (8%)
Query: 66 YNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIIC 123
YN+ I F + +++ S K + T+ +L+ C S + G +HS++
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
+ G D + S L+ ++ G L + ++F++I + V W L Y+ +G +E++
Sbjct: 139 KCGFNHDVAAMTS-LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197
Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR---------------------------- 215
LFKKM +G+ DSY VL VG+
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLY 257
Query: 216 ----RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
+++ A +FD + ++D+V+W+ MI GY +N ++G+E+F +ML D ++V
Sbjct: 258 AKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIV 317
Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
LS CA+ GAL G + + F + N L+DMY+KCG + VF++M E+
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
+V + I+G A+ G + +F + GI PD +L C GL++ G
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF 437
Query: 392 DYIK-ENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMIGALDL 446
+ I ++ ++ ++D++ + G + DA + MP++ + + W ++ L
Sbjct: 438 NAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRL 494
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/736 (35%), Positives = 413/736 (56%), Gaps = 64/736 (8%)
Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC 207
+++ ++F++++ F+WN+++ ++ G + E++ + +M G+ AD++T+ V+K
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 208 LAVVGNSRRVK--------------------------------DAHKLFDELSDRDVVSW 235
+A + + K DA K+F+E+ +RD+VSW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
N MISGY+A G L +FKEML GF D + ++ L C++ + G+ +H A++
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 296 ACF-SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIR 354
+ + ++ ++LDMYSK G++ A R+F M +R++V+W MI YAR G A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 355 LFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
F+ M + G++PDV ++L A A +LE G+ +H Y + + AL+DMY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASA---ILE-GRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAML-QNFEPDGVTMA 462
+CG + AE +F++M K+++SWN++I A L+LF + + PD T+A
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 463 CILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK 522
ILPA A +L GREIH YI++ ++ + N++V MY CG L AR F+ I K
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 523 DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
D++SW +I Y +HGFG ++ F++M + + P++ +F S+L ACS SG+VDEGW +F
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
M+ E I+P +EHY CM+DL+ RTGN S A RF+E MP P A IWGSLL R H +
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKD 615
Query: 643 VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIE 702
+ +AE AE +F++E DNTG YVLL N+YAEA +WE+V +++ + +G+ + S +E
Sbjct: 616 ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVE 675
Query: 703 IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYF--------PKTRYALINADEME 754
KGK ++F G SH KI +L + + E + P+T L+ +
Sbjct: 676 AKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPET---LVKSRSNS 732
Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
HS +LA FG+++ G+ + V N R+C CHE + S+ RREIV+ DS
Sbjct: 733 PR----RHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSK 788
Query: 815 RFHHFKDGRCSCRGFW 830
FHHF +GRCSC +W
Sbjct: 789 IFHHFSNGRCSCGNYW 804
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 281/582 (48%), Gaps = 60/582 (10%)
Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
+ L +SR ++DA +LFDE++ D WN MI G+ + G+ + ++ + M+ G
Sbjct: 69 RALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKA 128
Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
D T V+ A +L G+ +HA +K F ++ N+L+ +Y K G A +VF
Sbjct: 129 DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188
Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
E+M ER +VSW SMI+GY G ++ LF+ M++ G +PD ++ S L AC+ +
Sbjct: 189 EEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPK 248
Query: 386 IGKDVHDYIKENDMQS-SLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
+GK++H + + +++ + V +++DMY+K G ++ AE +FN M ++IV+WN MIG
Sbjct: 249 MGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCY 308
Query: 443 -----ALDLFVAML----QN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
D F+ QN +PD +T +LPA A L GR IHGY +R G
Sbjct: 309 ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPH 364
Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
+ A++DMY +CG L A +FD + K++ISW +IA Y +G A+ F ++
Sbjct: 365 MVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWD 424
Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM---RYECN--IEPKLEHYACMVDLLSR 607
+ + PD + S+L A + S + EG + RY N I L H M
Sbjct: 425 SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMC----- 479
Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKL-----AEKVAEHVFELEPDNTG 662
G+L +A + + + D W S++ +H ++ +E +A V P+ +
Sbjct: 480 -GDLEDARKCFNHI-LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV---NPNKST 534
Query: 663 YYVLLANVYAEA---EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPH 719
+ LLA E WE + ++ + ++ GC +++ G+ F A
Sbjct: 535 FASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCM-LDLIGRTGNFSAA------ 587
Query: 720 AKKIESLLKRLRLEMKREGYFPKTRY--ALINADEMEKEVAL 759
KR EM + P R +L+NA K++ +
Sbjct: 588 --------KRFLEEMP---FVPTARIWGSLLNASRNHKDITI 618
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 184/382 (48%), Gaps = 31/382 (8%)
Query: 93 KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
K D + S L C+ + S + GK++H S I D ++ + ++ M+ G++
Sbjct: 228 KPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAE 287
Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYTFSCVLKCLAVV 211
R+FN + + WN+++ Y++ G ++ F+KM + G+ D T +L A++
Sbjct: 288 RIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL 347
Query: 212 ----------------------------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
G ++K A +FD +++++V+SWN +I+ Y+
Sbjct: 348 EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
NG LE+F+E+ + D T+ ++L A +L GR +HA+ +K+ +
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI 467
Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
N+L+ MY+ CGDL+ A + F + + VVSW S+I YA G ++ LF M+
Sbjct: 468 ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASR 527
Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMADA 422
+ P+ S+L AC+ G+++ G + + +K E + + ++D+ + G+ + A
Sbjct: 528 VNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAA 587
Query: 423 ESVFNQMP-VKDIVSWNTMIGA 443
+ +MP V W +++ A
Sbjct: 588 KRFLEEMPFVPTARIWGSLLNA 609
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 479 bits (1234), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/687 (37%), Positives = 395/687 (57%), Gaps = 44/687 (6%)
Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
+M +G+ +Y S +++ + + + A +F + + +++ WN M G+ +
Sbjct: 55 QMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSD 114
Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
L+++ M++LG + T VL CA A G+ +H LK ++ + +
Sbjct: 115 PVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 174
Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTS----------------------------- 338
L+ MY + G L+ A +VF+K R VVS+T+
Sbjct: 175 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 234
Query: 339 --MIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
MI+GYA G + A+ LF+ M++ + PD + +++ ACA G +E+G+ VH +I +
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDL 446
+ S+L + NAL+D+Y+KCG + A +F ++P KD++SWNT+IG AL L
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 447 FVAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRH--GISADRNVANAIVDMY 503
F ML++ E P+ VTM ILPACA L A++ GR IH YI + G++ ++ +++DMY
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 504 VKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFI 563
KCG + A +F+ I K L SW MI G+ MHG + F+ MR+ GI+PD+++F+
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFV 474
Query: 564 SVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPV 623
+L ACSHSG++D G F M + + PKLEHY CM+DLL +G EA I MM +
Sbjct: 475 GLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEM 534
Query: 624 APDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKL 683
PD IW SLL C++H V+L E AE++ ++EP+N G YVLL+N+YA A +W EV K
Sbjct: 535 EPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKT 594
Query: 684 REKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKT 743
R ++ +G+KK PGCS IEI V+ F+ G HP ++I +L+ + + +++ G+ P T
Sbjct: 595 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDT 654
Query: 744 RYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKT 803
L +E KE AL HSEKLA+AFG+++ G + + KNLRVC +CHE K +SK
Sbjct: 655 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 714
Query: 804 ARREIVLRDSNRFHHFKDGRCSCRGFW 830
+REI+ RD RFHHF+DG CSC +W
Sbjct: 715 YKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 209/399 (52%), Gaps = 52/399 (13%)
Query: 95 DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
++ T+ +L+ CA K+ ++G+++H + + G +D V S L+ M+V G L++ +V
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS-LISMYVQNGRLEDAHKV 191
Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
F+K + V + L+ Y+ G
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRG------------------------------------- 214
Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
+++A KLFDE+ +DVVSWN MISGY G ++ LE+FK+M+ D +TMVTV+
Sbjct: 215 -YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
S CA G++ GR VH + F + N L+D+YSKCG+L+ A +FE++ + V+
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
SW ++I GY ++ A+ LF+ M+R G P+ + SIL ACA G ++IG+ +H YI
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 395 KE--NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------G 442
+ + ++ + +L+DMYAKCG + A VFN + K + SWN MI
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453
Query: 443 ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
+ DLF M + +PD +T +L AC+ L+ GR I
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 49/267 (18%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
++NA I + E GN ++A+E+ K+ + D T +++ CA S+E G++VH
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH--- 289
Query: 123 CESGIVIDDGVLGSK------LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
+ IDD GS L+ ++ CG+L+ +F ++ V WN L+ Y+
Sbjct: 290 ----LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGN-----------SRRVKD------ 219
+KE+L LF++M G + T +L A +G +R+K
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 220 -----------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
AH++F+ + + + SWN MI G+ +G A+ ++F M +G
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 263 FNVDLATMVTVLSGCANCGALMFGRAV 289
D T V +LS C++ G L GR +
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHI 492
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/706 (34%), Positives = 379/706 (53%), Gaps = 81/706 (11%)
Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
K +A N DA + + D + S++ +I + + + VF M + G
Sbjct: 55 KLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIP 114
Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
D + + CA A G+ +H + + + ++ MY +CG + A +VF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE-------------------- 365
++M ++ VV+ ++++ YAR+G + +R+ M GIE
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 366 ---------------PDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
PD ++S+L + +L +G+ +H Y+ + + V +A++
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 411 DMYAKCGSMADAESVFNQMPVKD-----------------------------------IV 435
DMY K G + S+FNQ + + +V
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 436 SWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYI 484
SW ++I AL+LF M + +P+ VT+ +LPAC ++AAL GR HG+
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 485 LRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
+R + + +V +A++DMY KCG + L++ +F+M+P K+L+ W ++ G+ MHG + +
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVM 474
Query: 545 ATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDL 604
+ F + + ++PD +SF S+L AC GL DEGW++F MM E I+P+LEHY+CMV+L
Sbjct: 475 SIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYY 664
L R G L EAY I+ MP PD+ +WG+LL CR+ + V LAE AE +F LEP+N G Y
Sbjct: 535 LGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTY 594
Query: 665 VLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIE 724
VLL+N+YA W EV +R K+ GLKKNPGCSWI++K +V +AG SHP +I
Sbjct: 595 VLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQIT 654
Query: 725 SLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVT 784
+ + EM++ G+ P +AL + +E E+E L GHSEKLA+ FG+LN P G ++V
Sbjct: 655 EKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVI 714
Query: 785 KNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
KNLR+CGDCH + KF+S A REI +RD+NRFHHFKDG CSC FW
Sbjct: 715 KNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 179 bits (454), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 225/473 (47%), Gaps = 82/473 (17%)
Query: 95 DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
D+ ++ ++CA+L + + GK++H + C SG+ +D V GS + M++ CG + + R+V
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS-MFHMYMRCGRMGDARKV 173
Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNS 214
F+++ + V + L+ Y++ G +E + + +M+S GI A
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA------------------ 215
Query: 215 RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
++VSWN ++SG+ +G ++ + +F+++ +LGF D T+ +VL
Sbjct: 216 ----------------NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVL 259
Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF--------- 325
+ L GR +H + +K K+ + ++DMY K G + G I +F
Sbjct: 260 PSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAG 319
Query: 326 --------------------------EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
E+ E +VVSWTS+IAG A+ G A+ LFR M
Sbjct: 320 VCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM 379
Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
G++P+ I S+L AC L G+ H + + +++V +AL+DMYAKCG +
Sbjct: 380 QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRI 439
Query: 420 ADAESVFNQMPVKDIVSWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPAC 468
++ VFN MP K++V WN+++ + +F ++++ +PD ++ +L AC
Sbjct: 440 NLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC 499
Query: 469 ASLAALERGREIHGYIL-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 520
+ + G + + +GI + +V++ + G L A L +P
Sbjct: 500 GQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP 552
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 207/483 (42%), Gaps = 88/483 (18%)
Query: 290 HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVF 349
HA LK+ + + L+ YS + A V + + + ++ S++S+I + +F
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 350 DGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNAL 409
+I +F M G+ PD + + ++ CA ++GK +H + + +V ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 410 MDMYAKCGSMADAESVFNQMPVKD-----------------------------------I 434
MY +CG M DA VF++M KD I
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 435 VSWNTMIGALDL------FVAMLQN-----FEPDGVTMACILPACASLAALERGREIHGY 483
VSWN ++ + V M Q F PD VT++ +LP+ L GR IHGY
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 484 ILRHGISADRNVANAIVDMYVKCGVLVLARSL---FDMIPAK------------------ 522
+++ G+ D+ V +A++DMY K G + SL F+M+ A
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 523 --------------DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYA 568
+++SWT +IAG +G +A+ F +M+ AG++P+ V+ S+L A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 569 CSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDAT 628
C + + G R + ++ + + ++D+ ++ G ++ + MMP +
Sbjct: 398 CGNIAALGHG-RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLV 455
Query: 629 IWGSLLCGCRIHHEVKLAEKVAEHVF--ELEPDNTGYYVLLA---NVYAEAEKWEEVKKL 683
W SL+ G +H + K + E + L+PD + LL+ V E W+ K +
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 684 REK 686
E+
Sbjct: 516 SEE 518
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 68 AEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
A+ G+ E L + M+V K + T S+L C ++ +L G+ H +
Sbjct: 364 AQNGKDIEALELFREMQV----AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
+D+ +GS L+ M+ CG + + VFN + + WN LM+ +S G KE + +F+
Sbjct: 420 -LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFE 478
Query: 188 KMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS-----WNCMISGY 242
+ + D +F+ +L VG + K F +S+ + ++CM++
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVG---LTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
G ++ ++ KEM F D +L+ C
Sbjct: 536 GRAGKLQEAYDLIKEM---PFEPDSCVWGALLNSC 567
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/786 (34%), Positives = 428/786 (54%), Gaps = 51/786 (6%)
Query: 95 DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRV 154
D TY +++ CA + + G VH ++ ++G+V +D +G+ LV + T G + + ++
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLV-EDVFVGNALVSFYGTHGFVTDALQL 244
Query: 155 FNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYTFSCVLKCLAVVGN 213
F+ + + WN ++ +S G +ES L +M + G A + ++ L V
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
Query: 214 SRRV-----------------------------------KDAHKLFDELSDRDVVSWNCM 238
R + +A +F ++++VVSWN M
Sbjct: 305 EREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 364
Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNV--DLATMVTVLSGCANCGALMFGRAVHAFALKA 296
+ G+ A G +V ++ML G +V D T++ + C + L + +H ++LK
Sbjct: 365 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 424
Query: 297 CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 356
F N + Y+KCG L A RVF + ++V SW ++I G+A+ ++
Sbjct: 425 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 484
Query: 357 RGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC 416
M G+ PD + + S+L AC+ L +GK+VH +I N ++ L+V +++ +Y C
Sbjct: 485 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 544
Query: 417 GSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACIL 465
G + +++F+ M K +VSWNT+I AL +F M L + G++M +
Sbjct: 545 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 604
Query: 466 PACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLI 525
AC+ L +L GRE H Y L+H + D +A +++DMY K G + + +F+ + K
Sbjct: 605 GACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 664
Query: 526 SWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM 585
SW MI GYG+HG +AI F +M++ G PD+++F+ VL AC+HSGL+ EG R+ + M
Sbjct: 665 SWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQM 724
Query: 586 RYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI-EMMPVAPDATIWGSLLCGCRIHHEVK 644
+ ++P L+HYAC++D+L R G L +A R + E M D IW SLL CRIH ++
Sbjct: 725 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 784
Query: 645 LAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIK 704
+ EKVA +FELEP+ YVLL+N+YA KWE+V+K+R++++ L+K+ GCSWIE+
Sbjct: 785 MGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 844
Query: 705 GKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSE 764
KV FV G ++I+SL L +++ + GY P T + E EK L GHSE
Sbjct: 845 RKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSE 904
Query: 765 KLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRC 824
KLA+ +G++ G TIRV KNLR+C DCH AK +SK REIV+RD+ RFHHFK+G C
Sbjct: 905 KLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVC 964
Query: 825 SCRGFW 830
SC +W
Sbjct: 965 SCGDYW 970
Score = 286 bits (732), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 200/692 (28%), Positives = 342/692 (49%), Gaps = 74/692 (10%)
Query: 70 IGRFCEVGNLEKAMEVLY--------SSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
I FCE G+L+K+ + SS+ + + +LQ K +E G+K+H +
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
+ S + +D VL ++++ M+ CG + R VF+ + + +F WN ++ YS+ + E
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 182 SLYLFKKM-QSLGIAADSYTFSCVLKC----------LAV--------------VGNSRR 216
L F +M + + D +T+ CV+K LAV VGN+
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALV 229
Query: 217 --------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML----NLGFN 264
V DA +LFD + +R++VSWN MI + NG +E+ + EM+ + F
Sbjct: 230 SFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 289
Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
D+AT+VTVL CA + G+ VH +A+K KE+ NN L+DMYSKCG + A +
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349
Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR--EGIEPDVYAITSILHACACDG 382
F+ ++VVSW +M+ G++ EG G + R M+ E ++ D I + + C +
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 409
Query: 383 LLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG 442
L K++H Y + + + V+NA + YAKCGS++ A+ VF+ + K + SWN +IG
Sbjct: 410 FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469
Query: 443 ----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
+LD + M + PD T+ +L AC+ L +L G+E+HG+I+R+ +
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529
Query: 492 DRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR 551
D V +++ +Y+ CG L ++LFD + K L+SW +I GY +GF A+ F M
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 552 QAGIEPDEVSFISVLYACS-----HSGLVDEGWRFFNMMRYECNIEPKLEHYAC-MVDLL 605
GI+ +S + V ACS G + +++ + I AC ++D+
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI-------ACSLIDMY 642
Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFEL--EPDNTGY 663
++ G+++++ + + A+ W +++ G IH K A K+ E + PD+ +
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF 701
Query: 664 YVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
+L E ++ L + S GLK N
Sbjct: 702 LGVLTACNHSGLIHEGLRYLDQMKSSFGLKPN 733
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 40/418 (9%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYS----SEKSKIDTKTYCSILQLCADLKSLEDGKKVHS 120
++N +G F G+ +VL E K D T + + +C L K++H
Sbjct: 360 SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 121 IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
+ V ++ ++ + V + CG L +RVF+ I + V WN L+ ++++ + +
Sbjct: 420 YSLKQEFVYNE-LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 478
Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAH------------------- 221
SL +M+ G+ DS+T +L + + + R K+ H
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 538
Query: 222 -------------KLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
LFD + D+ +VSWN +I+GY+ NG ++ L VF++M+ G +
Sbjct: 539 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 598
Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
+M+ V C+ +L GR HA+ALK + +L+DMY+K G + + +VF +
Sbjct: 599 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 658
Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
E+S SW +MI GY G+ AI+LF M R G PD +L AC GL+ G
Sbjct: 659 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 718
Query: 389 DVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK--DIVSWNTMIGA 443
D +K + ++ +L ++DM + G + A V + + D+ W +++ +
Sbjct: 719 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 776
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 27/300 (9%)
Query: 46 CTINPI-SASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEV-----LYSSEKSKIDTKTY 99
CT+ + A K+LV ++N I + + G ++A+ V LY + I +
Sbjct: 548 CTVQALFDAMEDKSLV----SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI---SM 600
Query: 100 CSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID 159
+ C+ L SL G++ H+ + ++ DD + L+ M+ G + + +VFN +
Sbjct: 601 MPVFGACSLLPSLRLGREAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK 659
Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD 219
WN ++ Y G KE++ LF++MQ G D TF L L +S + +
Sbjct: 660 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF---LGVLTACNHSGLIHE 716
Query: 220 AHKLFDELSDR-----DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
+ D++ ++ + C+I G +K L V E + D+ ++L
Sbjct: 717 GLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE--EMSEEADVGIWKSLL 774
Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLL-DMYSKCGDLDGAIRVFEKMGERSV 333
S C L G V A + E N LL ++Y+ G + +V ++M E S+
Sbjct: 775 SSCRIHQNLEMGEKVAAKLFE--LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSL 832
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/745 (36%), Positives = 401/745 (53%), Gaps = 84/745 (11%)
Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHK 222
V++ N LM+ YSKTG + LF +M +++++ VL + G+ + +
Sbjct: 49 VYLMNNLMNVYSKTGYALHARKLFDEMP----LRTAFSWNTVLSAYSKRGD---MDSTCE 101
Query: 223 LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGA 282
FD+L RD VSW MI GY G K + V +M+ G T+ VL+ A
Sbjct: 102 FFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRC 161
Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD------------------------- 317
+ G+ VH+F +K +S +N+LL+MY+KCGD
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 318 ------LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI-EPDVYA 370
+D A+ FE+M ER +V+W SMI+G+ + G A+ +F M+R+ + PD +
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCG------------- 417
+ S+L ACA L IGK +H +I S V NAL+ MY++CG
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 418 --------------------SMADAESVFNQMPVKDIVSWNTMI----------GALDLF 447
M A+++F + +D+V+W MI A++LF
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 448 VAMLQNFE-PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
+M+ + P+ T+A +L +SLA+L G++IHG ++ G +V+NA++ MY K
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 507 GVLVLARSLFDMIP-AKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISV 565
G + A FD+I +D +SWT MI HG +A+ F M G+ PD ++++ V
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
AC+H+GLV++G ++F+MM+ I P L HYACMVDL R G L EA FIE MP+ P
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
D WGSLL CR+H + L + AE + LEP+N+G Y LAN+Y+ KWEE K+R+
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
+ +KK G SWIE+K KV++F +HP +I +K++ E+K+ GY P T
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTAS 701
Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
L + +E KE L HSEKLA+AFG+++ P T+R+ KNLRVC DCH KF+SK
Sbjct: 702 VLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVG 761
Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
REI++RD+ RFHHFKDG CSCR +W
Sbjct: 762 REIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 208/487 (42%), Gaps = 110/487 (22%)
Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKC------------------------------ 315
+ VH +K+ + N L+++YSK
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 316 -GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
GD+D F+++ +R VSWT+MI GY G + AIR+ MV+EGIEP + +T++
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
L + A +E GK VH +I + ++ ++ VSN+L++MYAKCG A+ VF++M V+DI
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 435 VSWNTMIG-----------------------------------------ALDLFVAMLQN 453
SWN MI ALD+F ML++
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 454 --FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVL 511
PD T+A +L ACA+L L G++IH +I+ G V NA++ MY +CG +
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 512 ARSLF------------------------DMIPAK---------DLISWTIMIAGYGMHG 538
AR L DM AK D+++WT MI GY HG
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHY 598
+AI F M G P+ + ++L S + G + I +
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS-VSVS 451
Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF--EL 656
++ + ++ GN++ A R +++ D W S++ H + A ++ E + L
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 657 EPDNTGY 663
PD+ Y
Sbjct: 512 RPDHITY 518
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 169/437 (38%), Gaps = 110/437 (25%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI---DTKTYCSILQLCADLKSLEDGKKVHSI 121
+N+ I F + G +A+++ + + D T S+L CA+L+ L GK++HS
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 122 ICESGIVIDDGVLGSKLVFMFVTCG---------------------------------DL 148
I +G I G++ + L+ M+ CG D+
Sbjct: 305 IVTTGFDIS-GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 149 KEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-- 206
+ + +F + + V W ++ Y + G++ E++ LF+ M G +SYT + +L
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVA 423
Query: 207 ------------------------------CLAVVGNSRRVKDAHKLFDELS-DRDVVSW 235
+ + + + A + FD + +RD VSW
Sbjct: 424 SSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSW 483
Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
MI +G AE+ LE+F+ ML G D T V V S C + G + GR F +
Sbjct: 484 TSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR--QYFDMM 541
Query: 296 ACFSK---EISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
K +S ++D++ + G L A EKM
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM------------------------ 577
Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
IEPDV S+L AC +++GK + + + ++S S AL ++
Sbjct: 578 ----------PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYS-ALANL 626
Query: 413 YAKCGSMADAESVFNQM 429
Y+ CG +A + M
Sbjct: 627 YSACGKWEEAAKIRKSM 643
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust.
Identities = 268/754 (35%), Positives = 414/754 (54%), Gaps = 61/754 (8%)
Query: 97 KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
KT+ +L + L GK +H++ +S IV L + V ++ CG L R F
Sbjct: 9 KTFRDLLLKSVAERDLFTGKSLHALYVKS-IVASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
+ VF +N+++ Y+K DS +
Sbjct: 68 STEEPNVFSYNVIVKAYAK---------------------DS-----------------K 89
Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
+ A +LFDE+ D VS+N +ISGY + +FK M LGF VD T+ +++
Sbjct: 90 IHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA 149
Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE-RSVVS 335
C C + + +H F++ F S NN + YSK G L A+ VF M E R VS
Sbjct: 150 C--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207
Query: 336 WTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
W SMI Y + A+ L++ M+ +G + D++ + S+L+A L G+ H +
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 396 ENDMQSSLYVSNALMDMYAKCGS---MADAESVFNQMPVKDIVSWNTMIG---------- 442
+ + +V + L+D Y+KCG M D+E VF ++ D+V WNTMI
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 443 -ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR-NVANAI 499
A+ F M + PD + C+ AC++L++ + ++IHG ++ I ++R +V NA+
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
+ +Y K G L AR +FD +P + +S+ MI GY HG G +A+ + M +GI P++
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK 447
Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
++F++VL AC+H G VDEG +FN M+ IEP+ EHY+CM+DLL R G L EA RFI+
Sbjct: 448 ITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFID 507
Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
MP P + W +LL CR H + LAE+ A + ++P YV+LAN+YA+A KWEE
Sbjct: 508 AMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEE 567
Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
+ +R+ + + ++K PGCSWIE+K K ++FVA SHP +++ L+ + +MK+ GY
Sbjct: 568 MASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGY 627
Query: 740 FPKTRYALIN---ADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEM 796
++A++ A E ++E+ L HSEKLA+AFG+++ G+ + V KNLR+CGDCH
Sbjct: 628 VMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNA 687
Query: 797 AKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
KFMS A REI++RD+ RFH FKDG+CSC +W
Sbjct: 688 IKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 42/290 (14%)
Query: 93 KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD---LK 149
KID T S+L L L G++ H + ++G + V GS L+ + CG +
Sbjct: 237 KIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV-GSGLIDFYSKCGGCDGMY 295
Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNF-KESLYLFKKMQSLGIAADSYTFSCVL--- 205
+ +VF +I + + +WN ++ YS +E++ F++MQ +G D +F CV
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355
Query: 206 -------KCLAVVG-----------------------NSRRVKDAHKLFDELSDRDVVSW 235
+C + G S ++DA +FD + + + VS+
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
NCMI GY +G + L +++ ML+ G + T V VLS CA+CG + G+ + +K
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE-YFNTMK 474
Query: 296 ACF--SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTSMIAG 342
F E + ++D+ + G L+ A R + M + V+W +++
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust.
Identities = 259/776 (33%), Positives = 412/776 (53%), Gaps = 46/776 (5%)
Query: 99 YCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
+ S+L C ++SLE G+++H ++ + G D V + LV ++ G+L +F+ +
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA-LVSLYFHLGNLISAEHIFSNM 349
Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-SCVLKC---------- 207
+N L++ S+ G ++++ LFK+M G+ DS T S V+ C
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 208 --------LAVVGNSR-------------RVKDAHKLFDELSDRDVVSWNCMISGYIANG 246
L N++ ++ A F E +VV WN M+ Y
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 247 VAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNN 306
+F++M + T ++L C G L G +H+ +K F +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 307 TLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEP 366
L+DMY+K G LD A + + + VVSWT+MIAGY + D A+ FR M+ GI
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 367 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 426
D +T+ + ACA L+ G+ +H + S L NAL+ +Y++CG + ++ F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 427 NQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALE 475
Q D ++WN ++ AL +FV M + + + T + A + A ++
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 476 RGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYG 535
+G+++H I + G ++ V NA++ MY KCG + A F + K+ +SW +I Y
Sbjct: 710 QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 769
Query: 536 MHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKL 595
HGFG +A+ +F+ M + + P+ V+ + VL ACSH GLVD+G +F M E + PK
Sbjct: 770 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 829
Query: 596 EHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE 655
EHY C+VD+L+R G LS A FI+ MP+ PDA +W +LL C +H +++ E A H+ E
Sbjct: 830 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 889
Query: 656 LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGS 715
LEP+++ YVLL+N+YA ++KW+ R+K+ +G+KK PG SWIE+K ++ F G
Sbjct: 890 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 949
Query: 716 SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME-KEVALCGHSEKLAMAFGILN 774
+HP A +I + L GY ++L+N + E K+ + HSEKLA++FG+L+
Sbjct: 950 NHPLADEIHEYFQDLTKRASEIGYVQDC-FSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1008
Query: 775 LPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
LPA I V KNLRVC DCH KF+SK + REI++RD+ RFHHF+ G CSC+ +W
Sbjct: 1009 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 242 bits (618), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 169/570 (29%), Positives = 261/570 (45%), Gaps = 47/570 (8%)
Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
SL++G+K+HS I + G+ +G L KL ++ GDL +VF+++ +F WN ++
Sbjct: 100 SLDEGRKLHSQILKLGL-DSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL---------------------- 208
E + E LF +M S + + TFS VL+
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 209 ---AVVGN------SRR--VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
VV N SR V A ++FD L +D SW MISG N + + +F +
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 258 MLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD 317
M LG +VLS C +L G +H LK FS + N L+ +Y G+
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
L A +F M +R V++ ++I G ++ G + A+ LF+ M +G+EPD + S++ A
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398
Query: 378 CACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
C+ DG L G+ +H Y + S+ + AL+++YAKC + A F + V+++V W
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 438 NTMIGALDLFVAMLQNFE-----------PDGVTMACILPACASLAALERGREIHGYILR 486
N M+ A L + +F P+ T IL C L LE G +IH I++
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
+ V + ++DMY K G L A + KD++SWT MIAGY + F A+ T
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLS 606
F M GI DEV + + AC+ + EG + + L +V L S
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYS 637
Query: 607 RTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
R G + E+Y E A D W +L+ G
Sbjct: 638 RCGKIEESYLAFEQTE-AGDNIAWNALVSG 666
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/577 (27%), Positives = 271/577 (46%), Gaps = 47/577 (8%)
Query: 89 SEKSKIDTKTYCSILQLC-ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD 147
SE + T+ +L+ C + + +++H+ I G+ D V+ + L+ ++ G
Sbjct: 179 SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR-DSTVVCNPLIDLYSRNGF 237
Query: 148 LKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK- 206
+ RRVF+ + W ++ SK E++ LF M LGI Y FS VL
Sbjct: 238 VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297
Query: 207 ----------------------------CLAVVG---NSRRVKDAHKLFDELSDRDVVSW 235
C A+V + + A +F +S RD V++
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357
Query: 236 NCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
N +I+G G EK +E+FK M G D T+ +++ C+ G L G+ +HA+ K
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
F+ LL++Y+KC D++ A+ F + +VV W M+ Y + R+
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477
Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
FR M E I P+ Y SIL C G LE+G+ +H I + + Q + YV + L+DMYAK
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 537
Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACI 464
G + A + + KD+VSW TMI AL F ML + D V +
Sbjct: 538 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 597
Query: 465 LPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDL 524
+ ACA L AL+ G++IH G S+D NA+V +Y +CG + + F+ A D
Sbjct: 598 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN 657
Query: 525 ISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM 584
I+W +++G+ G +A+ F M + GI+ + +F S + A S + + +G + +
Sbjct: 658 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAV 717
Query: 585 MRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEM 620
+ + + + E ++ + ++ G++S+A + F+E+
Sbjct: 718 IT-KTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 753
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 206/464 (44%), Gaps = 47/464 (10%)
Query: 260 NLGFNVDLATMVTVLSGCANC-GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
N G + T+ +L GC G+L GR +H+ LK + L D Y GDL
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHAC 378
GA +VF++M ER++ +W MI A + LF MV E + P+ + +L AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 379 ACDGL-LEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSW 437
+ ++ + +H I ++ S V N L+D+Y++ G + A VF+ + +KD SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 438 NTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILR 486
MI A+ LF M + P + +L AC + +LE G ++HG +L+
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 487 HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIAT 546
G S+D V NA+V +Y G L+ A +F + +D +++ +I G G+G A+
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 547 FNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWR-------------------FFNMMRY 587
F M G+EPD + S++ ACS G + G + N+
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 588 ECNIEPKLEHY--------------ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
+IE L+++ LL N +R +++ + P+ + S+
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 634 LCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV-LLANVYAEAEK 676
L C +++L E++ + + Y +L ++YA+ K
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 271/731 (37%), Positives = 407/731 (55%), Gaps = 82/731 (11%)
Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
WN+ + Y +TG E+L +FK+M + + S L+ + + A KLFD
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLR-------NGEFELARKLFD 119
Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
E+ +RD+VSWN MI GY+ N K E+F+ M D+ + T+LSG A G +
Sbjct: 120 EMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDD 175
Query: 286 GRAV---------------------HAFALKACF---SKE----ISFNNTLLDMYSKCGD 317
R+V ++ +AC S+E +S+ N LL + K
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW-NCLLGGFVKKKK 234
Query: 318 LDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHA 377
+ A + F+ M R VVSW ++I GYA+ G D A +LF E DV+ T+++
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQDVFTWTAMVSG 290
Query: 378 CACDGLLEIGKDVHDYIKENDMQS-----SLYVSNALMDM-------------------- 412
+ ++E +++ D + E + S + YV M+M
Sbjct: 291 YIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMI 350
Query: 413 --YAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNFEPDGV 459
YA+CG +++A+++F++MP +D VSW MI AL LFV M + +
Sbjct: 351 TGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRS 410
Query: 460 TMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
+ + L CA + ALE G+++HG +++ G V NA++ MY KCG + A LF +
Sbjct: 411 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Query: 520 PAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 579
KD++SW MIAGY HGFG A+ F M++ G++PD+ + ++VL ACSH+GLVD+G
Sbjct: 471 AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 580 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 639
++F M + + P +HYACMVDLL R G L +A+ ++ MP PDA IWG+LL R+
Sbjct: 531 QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRV 590
Query: 640 HHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCS 699
H +LAE A+ +F +EP+N+G YVLL+N+YA + +W +V KLR ++ +G+KK PG S
Sbjct: 591 HGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYS 650
Query: 700 WIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVAL 759
WIEI+ K + F G HP +I + L+ L L MK+ GY KT L + +E EKE +
Sbjct: 651 WIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMV 710
Query: 760 CGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHF 819
HSE+LA+A+GI+ + +G+ IRV KNLRVC DCH K+M++ R I+LRD+NRFHHF
Sbjct: 711 RYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHF 770
Query: 820 KDGRCSCRGFW 830
KDG CSC +W
Sbjct: 771 KDGSCSCGDYW 781
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 201/486 (41%), Gaps = 74/486 (15%)
Query: 229 DRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRA 288
D D+ WN IS Y+ G + L VFK M +V M+ SG G R
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWS-SVSYNGMI---SGYLRNGEFELARK 116
Query: 289 VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGV 348
+ +++ N ++ Y + +L A +FE M ER V SW +M++GYA+ G
Sbjct: 117 L----FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 349 FDGAIRLFRGMVREGIEPDVYAITSILHA--------------------------CACDG 382
D A +F M E + + ++L A C G
Sbjct: 173 VDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGG 228
Query: 383 LLEIGKDVHDYIKENDMQSSLYVS-NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI 441
++ K V + M VS N ++ YA+ G + +A +F++ PV+D+ +W M+
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 442 G----------ALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISA 491
A +LF M + E V+ +L +E +E+ +
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNE---VSWNAMLAGYVQGERMEMAKEL------FDVMP 339
Query: 492 DRNVA--NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
RNV+ N ++ Y +CG + A++LFD +P +D +SW MIAGY G +A+ F
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 550 MRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMM---RYE--CNIEPKLEHYACMVDL 604
M + G + SF S L C+ ++ G + + YE C + L C
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC---- 455
Query: 605 LSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE--LEPDNTG 662
+ G++ EA + M D W +++ G H ++A + E + L+PD+
Sbjct: 456 --KCGSIEEANDLFKEM-AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 663 YYVLLA 668
+L+
Sbjct: 513 MVAVLS 518
Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 167/355 (47%), Gaps = 39/355 (10%)
Query: 294 LKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAI 353
L C +I N + Y + G + A+RVF++M S VS+ MI+GY R G F+ A
Sbjct: 56 LLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELAR 115
Query: 354 RLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMY 413
+LF M E D+ + ++ + L +++ + + E D+ S N ++ Y
Sbjct: 116 KLFDEMP----ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS----WNTMLSGY 167
Query: 414 AKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEPDGVTMACIL-PACASLA 472
A+ G + DA SVF++MP K+ VSWN ++ A +QN + + AC+L + + A
Sbjct: 168 AQNGCVDDARSVFDRMPEKNDVSWNALLSAY------VQNSK---MEEACMLFKSRENWA 218
Query: 473 ALERGREIHGYILRHGISADR------NVA-----NAIVDMYVKCGVLVLARSLFDMIPA 521
+ + G++ + I R NV N I+ Y + G + AR LFD P
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
+D+ +WT M++GY + +A F+ M E +EVS+ ++L ++
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKEL 334
Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
F++M C + + M+ ++ G +SEA + MP D W +++ G
Sbjct: 335 FDVM--PCR---NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 133/330 (40%), Gaps = 68/330 (20%)
Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
++ + CG + E + +F+K+ W ++ YS++G+ E+L LF +M+ G +
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 198 SYTFSCVLKCLA------------------------VVGNS--------RRVKDAHKLFD 225
+FS L A VGN+ +++A+ LF
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
E++ +D+VSWN MI+GY +G E L F+ M G D ATMV VLS C++ G +
Sbjct: 469 EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK 528
Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
GR M G + + + M+ R
Sbjct: 529 GRQY------------------FYTMTQDYGVMPNS------------QHYACMVDLLGR 558
Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSS-LY 404
G+ + A L + M EPD ++L A G E+ + D I + ++S +Y
Sbjct: 559 AGLLEDAHNLMKNMP---FEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 615
Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDI 434
V L ++YA G D + +M K +
Sbjct: 616 V--LLSNLYASSGRWGDVGKLRVRMRDKGV 643
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 16/218 (7%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSII 122
++ A I + + G+ +A+ + E+ +++ ++ S L CAD+ +LE GK++H +
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435
Query: 123 CESGIVIDDG-VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
+ G + G +G+ L+ M+ CG ++E +F ++ + WN ++ YS+ G +
Sbjct: 436 VKGGY--ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493
Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWN----- 236
+L F+ M+ G+ D T VL + G V + F ++ V N
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTG---LVDKGRQYFYTMTQDYGVMPNSQHYA 550
Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVL 274
CM+ G+ E + K N+ F D A T+L
Sbjct: 551 CMVDLLGRAGLLEDAHNLMK---NMPFEPDAAIWGTLL 585
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 468 bits (1204), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/629 (38%), Positives = 368/629 (58%), Gaps = 21/629 (3%)
Query: 223 LFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCG 281
LF+ D+ DV SWN +I+ +G + + L F M L ++ + C++
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 282 ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIA 341
+ G+ H A + +I ++ L+ MYS CG L+ A +VF+++ +R++VSWTSMI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 342 GYAREGVFDGAIRLFRGMV------REGIEPDVYAITSILHACACDGLLEIGKDVHDYIK 395
GY G A+ LF+ ++ + + D + S++ AC+ + + +H ++
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 396 ENDMQSSLYVSNALMDMYAKCGS--MADAESVFNQMPVKDIVSWNTMIG----------A 443
+ + V N L+D YAK G +A A +F+Q+ KD VS+N+++ A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 444 LDLFVAMLQN--FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVD 501
++F +++N + +T++ +L A + AL G+ IH ++R G+ D V +I+D
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 502 MYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVS 561
MY KCG + AR FD + K++ SWT MIAGYGMHG A+ F M +G+ P+ ++
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 562 FISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMM 621
F+SVL ACSH+GL EGWR+FN M+ +EP LEHY CMVDLL R G L +AY I+ M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 622 PVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVK 681
+ PD+ IW SLL CRIH V+LAE +FEL+ N GYY+LL+++YA+A +W++V+
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 682 KLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFP 741
++R + RGL K PG S +E+ G+V++F+ G HP +KI L L ++ GY
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Query: 742 KTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMS 801
T + DE EKE+ L HSEKLA+AFGI+N G T+ V KNLRVC DCH + K +S
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630
Query: 802 KTARREIVLRDSNRFHHFKDGRCSCRGFW 830
K RE V+RD+ RFHHFKDG CSC +W
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 216/439 (49%), Gaps = 55/439 (12%)
Query: 154 VFNK-IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC----- 207
+FN+ +D VF WN ++ + +++G+ E+L F M+ L + +F C +K
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 208 ---------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
+ + +++DA K+FDE+ R++VSW MI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 241 GYIANGVAEKGLEVFKEML------NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
GY NG A + +FK++L + +D +V+V+S C+ A ++H+F +
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAI--RVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
K F + +S NTLLD Y+K G+ A+ ++F+++ ++ VS+ S+++ YA+ G+ + A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 353 IRLFRGMVREGIEP-DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMD 411
+FR +V+ + + ++++L A + G L IGK +HD + ++ + V +++D
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 412 MYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVT 460
MY KCG + A F++M K++ SW MI AL+LF AM+ + P+ +T
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 461 MACILPACASLAA-LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMI 519
+L AC+ +E R + R G+ +VD+ + G L A L +
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 520 PAK-DLISWTIMIAGYGMH 537
K D I W+ ++A +H
Sbjct: 451 KMKPDSIIWSSLLAACRIH 469
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 194/424 (45%), Gaps = 46/424 (10%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSII 122
++N+ I G+ +A+ S K + ++ ++ C+ L + GK+ H
Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102
Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
G D + S L+ M+ TCG L++ R+VF++I + W ++ Y GN ++
Sbjct: 103 FVFGYQ-SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDA 161
Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKD----------------------- 219
+ LFK + D F + ++V+ RV
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221
Query: 220 -----------------AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NL 261
A K+FD++ D+D VS+N ++S Y +G++ + EVF+ ++ N
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281
Query: 262 GFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
+ T+ TVL ++ GAL G+ +H ++ ++ +++DMY KCG ++ A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
+ F++M ++V SWT+MIAGY G A+ LF M+ G+ P+ S+L AC+
Sbjct: 342 RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHA 401
Query: 382 GLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNT 439
GL G + +K ++ L ++D+ + G + A + +M +K D + W++
Sbjct: 402 GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSS 461
Query: 440 MIGA 443
++ A
Sbjct: 462 LLAA 465
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/571 (41%), Positives = 346/571 (60%), Gaps = 17/571 (2%)
Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
C + +L VH L ++ L+ MYS G +D A +VF+K +R++ W
Sbjct: 87 CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146
Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD----GLLEIGKDVHD 392
++ G + + L+ M R G+E D + T +L AC L GK++H
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 206
Query: 393 YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG---------- 442
++ S +Y+ L+DMYA+ G + A VF MPV+++VSW+ MI
Sbjct: 207 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 266
Query: 443 ALDLFVAML---QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
AL F M+ ++ P+ VTM +L ACASLAALE+G+ IHGYILR G+ + V +A+
Sbjct: 267 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 326
Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
V MY +CG L + + +FD + +D++SW +I+ YG+HG+G AI F +M G P
Sbjct: 327 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 386
Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
V+F+SVL ACSH GLV+EG R F M + I+P++EHYACMVDLL R L EA + ++
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 446
Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
M P +WGSLL CRIH V+LAE+ + +F LEP N G YVLLA++YAEA+ W+E
Sbjct: 447 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 506
Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
VK++++ + RGL+K PG W+E++ K+ FV+ +P ++I + L +L +MK +GY
Sbjct: 507 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGY 566
Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
P+T+ L + EKE + GHSEKLA+AFG++N G+ IR+TKNLR+C DCH KF
Sbjct: 567 IPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKF 626
Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
+SK +EI++RD NRFH FK+G CSC +W
Sbjct: 627 ISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 227/471 (48%), Gaps = 48/471 (10%)
Query: 13 LFFSPPNQSYGKKFASYKPSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGR 72
+F S P Q + + + LP S SC++ + SIS K N N I
Sbjct: 1 MFLSHPPQVIQPTYHTV--NFLP--RSPLKPPSCSVALNNPSISSGAGAKISN-NQLIQS 55
Query: 73 FCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDG 132
C+ G L++A+ VL S++S +TY ++ C SL D +VH I ++G D
Sbjct: 56 LCKEGKLKQAIRVL--SQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNG-SDQDP 112
Query: 133 VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSL 192
L +KL+ M+ G + R+VF+K +++WN L + G+ +E L L+ KM +
Sbjct: 113 FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI 172
Query: 193 GIAADSYTFSCVLK-CLA---VVGNSRRVKDAHK-------------------------- 222
G+ +D +T++ VLK C+A V + + K+ H
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232
Query: 223 ------LFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML--NLGFNVDLATMVTVL 274
+F + R+VVSW+ MI+ Y NG A + L F+EM+ + + TMV+VL
Sbjct: 233 VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292
Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
CA+ AL G+ +H + L+ + + L+ MY +CG L+ RVF++M +R VV
Sbjct: 293 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV 352
Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYI 394
SW S+I+ Y G AI++F M+ G P S+L AC+ +GL+E GK + + +
Sbjct: 353 SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412
Query: 395 -KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIGA 443
+++ ++ + ++D+ + + +A + M + W +++G+
Sbjct: 413 WRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 197/412 (47%), Gaps = 22/412 (5%)
Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
G LK+ RV ++ + + LL+ + ++L + + + G D + + ++
Sbjct: 60 GKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLI 119
Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
+ +G+ V A K+FD+ R + WN + G E+ L ++ +M +G
Sbjct: 120 GMYSDLGS---VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVES 176
Query: 266 DLATMVTVLSGCA----NCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGA 321
D T VL C LM G+ +HA + +S + TL+DMY++ G +D A
Sbjct: 177 DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYA 236
Query: 322 IRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE--PDVYAITSILHACA 379
VF M R+VVSW++MIA YA+ G A+R FR M+RE + P+ + S+L ACA
Sbjct: 237 SYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACA 296
Query: 380 CDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNT 439
LE GK +H YI + S L V +AL+ MY +CG + + VF++M +D+VSWN+
Sbjct: 297 SLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNS 356
Query: 440 MIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILR-H 487
+I A+ +F ML N P VT +L AC+ +E G+ + + R H
Sbjct: 357 LISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDH 416
Query: 488 GISADRNVANAIVDMYVKCGVL-VLARSLFDMIPAKDLISWTIMIAGYGMHG 538
GI +VD+ + L A+ + DM W ++ +HG
Sbjct: 417 GIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 154/343 (44%), Gaps = 23/343 (6%)
Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
G + +S +I +EG AIR+ + + P ++ C L
Sbjct: 42 GAGAKISNNQLIQSLCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDAL 97
Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALD--- 445
VH +I +N +++ L+ MY+ GS+ A VF++ + I WN + AL
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 446 -------LFVAMLQ-NFEPDGVTMACILPACA----SLAALERGREIHGYILRHGISADR 493
L+ M + E D T +L AC ++ L +G+EIH ++ R G S+
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
+ +VDMY + G + A +F +P ++++SW+ MIA Y +G +A+ TF +M +
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 554 GIE--PDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNL 611
+ P+ V+ +SVL AC+ +++G + + ++ L + +V + R G L
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 612 SEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVF 654
R + M D W SL+ +H K A ++ E +
Sbjct: 337 EVGQRVFDRMH-DRDVVSWNSLISSYGVHGYGKKAIQIFEEML 378
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 43/312 (13%)
Query: 95 DTKTYCSILQLCA----DLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
D TY +L+ C + L GK++H+ + G ++ + LV M+ G +
Sbjct: 177 DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM-TTLVDMYARFGCVDY 235
Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYTFSCVLKCL 208
VF + V W+ ++ Y+K G E+L F++M ++ + +S T VL+
Sbjct: 236 ASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC 295
Query: 209 A--------------------------------VVGNSRRVKDAHKLFDELSDRDVVSWN 236
A + G +++ ++FD + DRDVVSWN
Sbjct: 296 ASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWN 355
Query: 237 CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALK 295
+IS Y +G +K +++F+EML G + T V+VL C++ G + G R
Sbjct: 356 SLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRD 415
Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM-GERSVVSWTSMIAGYAREGVFDGAIR 354
+I ++D+ + LD A ++ + M E W S++ G + A R
Sbjct: 416 HGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAER 475
Query: 355 LFRGMVREGIEP 366
R + +EP
Sbjct: 476 ASRRLF--ALEP 485
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 290/815 (35%), Positives = 421/815 (51%), Gaps = 84/815 (10%)
Query: 96 TKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCG---DLKEGR 152
TK S L+ C K++++ K H + + G+ D + +KLV G L +
Sbjct: 32 TKATPSSLKNC---KTIDELKMFHRSLTKQGLDNDVSTI-TKLVARSCELGTRESLSFAK 87
Query: 153 RVF-NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-- 209
VF N G F++N L+ Y+ +G E++ LF +M + GI+ D YTF L A
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 210 -VVGNSRRV----------KD-------------------AHKLFDELSDRDVVSWNCMI 239
GN ++ KD A K+FDE+S+R+VVSW MI
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 240 SGYIANGVAEKGLEVFKEML-NLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
GY A+ +++F M+ + + TMV V+S CA L G V+AF +
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
+ L+DMY KC +D A R+F++ G ++ +M + Y R+G+ A+ +F
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKC-- 416
M+ G+ PD ++ S + +C+ + GK H Y+ N +S + NAL+DMY KC
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 387
Query: 417 -----------------------------GSMADAESVFNQMPVKDIVSWNTMIG----- 442
G + A F MP K+IVSWNT+I
Sbjct: 388 QDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQG 447
Query: 443 -----ALDLFVAML--QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNV 495
A+++F +M + DGVTM I AC L AL+ + I+ YI ++GI D +
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
Query: 496 ANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGI 555
+VDM+ +CG A S+F+ + +D+ +WT I M G AI F+DM + G+
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
+PD V+F+ L ACSH GLV +G F M + P+ HY CMVDLL R G L EA
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627
Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAE 675
+ IE MP+ P+ IW SLL CR+ V++A AE + L P+ TG YVLL+NVYA A
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687
Query: 676 KWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
+W ++ K+R + +GL+K PG S I+I+GK + F +G SHP IE++L +
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRAS 747
Query: 736 REGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHE 795
G+ P L++ DE EK L HSEKLAMA+G+++ G TIR+ KNLRVC DCH
Sbjct: 748 HLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHS 807
Query: 796 MAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
AKF SK REI+LRD+NRFH+ + G+CSC FW
Sbjct: 808 FAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/554 (26%), Positives = 254/554 (45%), Gaps = 83/554 (14%)
Query: 66 YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
YN+ I + G +A+ + S I D T+ L CA ++ +G ++H +I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
+ G D V S LV + CG+L R+VF+++ V W ++ Y++ K+++
Sbjct: 162 KMGYAKDLFVQNS-LVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 184 YLFKKM-QSLGIAADSYTFSCVL-------------KCLAVVGNS--------------- 214
LF +M + + +S T CV+ K A + NS
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 215 ----RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 270
+ A +LFDE ++ N M S Y+ G+ + L VF M++ G D +M
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGE 330
++ +S C+ +++G++ H + L+ F + N L+DMY KC D A R+F++M
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 331 RSVVSWTSMIAGYAREGVFDGAIRLFRGM------------------------------- 359
++VV+W S++AGY G D A F M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 360 -VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
+EG+ D + SI AC G L++ K ++ YI++N +Q + + L+DM+++CG
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPA 467
A S+FN + +D+ +W IG A++LF M+ Q +PDGV L A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 468 CASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP--AKDL 524
C+ +++G+EI +L+ HG+S + +VD+ + G+L A L + +P D+
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 525 ISWTIMIAGYGMHG 538
I W ++A + G
Sbjct: 641 I-WNSLLAACRVQG 653
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 65 NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
++N I + E+A+EV + S E D T SI C L +L+ K ++
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
I ++GI +D LG+ LV MF CGD + +FN + N V W + + GN +
Sbjct: 496 IEKNGIQLDVR-LGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDEL------SDRDVVSW 235
++ LF M G+ D F + L + V+ ++F + S D V +
Sbjct: 555 AIELFDDMIEQGLKPDGVAF---VGALTACSHGGLVQQGKEIFYSMLKLHGVSPED-VHY 610
Query: 236 NCMISGYIANGVAEKGLEVFKEM 258
CM+ G+ E+ +++ ++M
Sbjct: 611 GCMVDLLGRAGLLEEAVQLIEDM 633
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 464 bits (1195), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/705 (36%), Positives = 388/705 (55%), Gaps = 45/705 (6%)
Query: 170 MHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL---------------KCLAV---- 210
+ EY +G + L F M + D TF +L C+A+
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 211 -----VGNS--------RRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKE 257
V NS R+ A +FD +S+RD++SWN +I+G NG+ + + +F +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 258 MLNLGFNVDLATMVTVLSGCANCG-ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCG 316
+L G D TM +VL ++ L + VH A+K + + L+D YS+
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 317 DLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILH 376
+ A +FE+ +V+W +M+AGY + ++LF M ++G D + + ++
Sbjct: 467 CMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 377 ACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS 436
C + GK VH Y ++ L+VS+ ++DMY KCG M+ A+ F+ +PV D V+
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA 585
Query: 437 WNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYIL 485
W TMI A +F M L PD T+A + A + L ALE+GR+IH L
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645
Query: 486 RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIA 545
+ + D V ++VDMY KCG + A LF I ++ +W M+ G HG G + +
Sbjct: 646 KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQ 705
Query: 546 TFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLL 605
F M+ GI+PD+V+FI VL ACSHSGLV E ++ M + I+P++EHY+C+ D L
Sbjct: 706 LFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADAL 765
Query: 606 SRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYV 665
R G + +A IE M + A+++ +LL CR+ + + ++VA + ELEP ++ YV
Sbjct: 766 GRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYV 825
Query: 666 LLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIES 725
LL+N+YA A KW+E+K R + +KK+PG SWIE+K K++IFV S+ + I
Sbjct: 826 LLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYR 885
Query: 726 LLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTK 785
+K + ++K+EGY P+T + L++ +E EKE AL HSEKLA+AFG+L+ P IRV K
Sbjct: 886 KVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIK 945
Query: 786 NLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
NLRVCGDCH K+++K REIVLRD+NRFH FKDG CSC +W
Sbjct: 946 NLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 249 bits (637), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 185/642 (28%), Positives = 323/642 (50%), Gaps = 32/642 (4%)
Query: 74 CEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSIICESGIVIDD 131
C V N+++A + + + T T +L+LC + + H C+ G+ D+
Sbjct: 121 CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180
Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
V G+ LV +++ G +KEG+ +F ++ V +WNL++ Y + G +E++ L S
Sbjct: 181 FVAGA-LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHS 239
Query: 192 LGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
G+ + T + + ++ +VK D S +++ N +S Y+ +G
Sbjct: 240 SGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSAL 299
Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
L+ F +M+ D T + +L+ +L G+ VH ALK ++ +N+L++M
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
Y K A VF+ M ER ++SW S+IAG A+ G+ A+ LF ++R G++PD Y +
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 372 TSILHACAC--DGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
TS+L A + +G L + K VH + IK N++ S +VS AL+D Y++ M +AE +F +
Sbjct: 420 TSVLKAASSLPEG-LSLSKQVHVHAIKINNVSDS-FVSTALIDAYSRNRCMKEAEILFER 477
Query: 429 MPVKDIVSWNTMIG----------ALDLFVAMLQNFE-PDGVTMACILPACASLAALERG 477
D+V+WN M+ L LF M + E D T+A + C L A+ +G
Sbjct: 478 HNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG 536
Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
+++H Y ++ G D V++ I+DMYVKCG + A+ FD IP D ++WT MI+G +
Sbjct: 537 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIEN 596
Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFF-NMMRYECNIEPKLE 596
G A F+ MR G+ PDE + ++ A S +++G + N ++ C +P +
Sbjct: 597 GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 656
Query: 597 HYACMVDLLSRTGNLSEAY---RFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
+VD+ ++ G++ +AY + IEMM + T W ++L G H E K ++ + +
Sbjct: 657 --TSLVDMYAKCGSIDDAYCLFKRIEMMNI----TAWNAMLVGLAQHGEGKETLQLFKQM 710
Query: 654 FEL--EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLK 693
L +PD + +L+ E K +R G+K
Sbjct: 711 KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 283 LMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAG 342
LM G+ HA L + E N L+ MYSKCG L A RVF+KM +R +VSW S++A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 343 YAREGV-----FDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
YA+ A LFR + ++ + ++ +L C G + + H Y +
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA 443
+ +V+ AL+++Y K G + + + +F +MP +D+V WN M+ A
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
G+ H IL + +R + N ++ MY KCG L AR +FD +P +DL+SW ++A Y
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 537 HGFGC------DAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECN 590
C A F +RQ + ++ +L C HSG V W + Y C
Sbjct: 118 SS-ECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV---WASESFHGYACK 173
Query: 591 IEPKLEHY--ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
I + + +V++ + G + E E MP D +W +L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLML 218
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 269/818 (32%), Positives = 416/818 (50%), Gaps = 128/818 (15%)
Query: 99 YCSILQLCADLK--SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
Y + L+LC L+ SL+ + VH I G +L ++L+ ++ +L R++F+
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHIL-NRLIDVYCKSSELNYARQLFD 73
Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR 216
+I ++ Y +G+ + +F+K C+
Sbjct: 74 EISEPDKIARTTMVSGYCASGDITLARGVFEKAPV---------------CM-------- 110
Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
RD V +N MI+G+ N + +F +M + GF D T +VL+G
Sbjct: 111 -------------RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAG 157
Query: 277 CANCG-----ALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGD----LDGAIRVFEK 327
A + F HA ALK+ S +N L+ +YSKC L A +VF++
Sbjct: 158 LALVADDEKQCVQF----HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDE 213
Query: 328 MGERSVVSWTSMIAGYAREGVFD--------------------------------GAIRL 355
+ E+ SWT+M+ GY + G FD A+ +
Sbjct: 214 ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEM 273
Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
R MV GIE D + S++ ACA GLL++GK VH Y+ + S + N+L+ +Y K
Sbjct: 274 VRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYK 332
Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGA-------------------------------- 443
CG +A ++F +MP KD+VSWN ++
Sbjct: 333 CGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGL 392
Query: 444 ---------LDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
L LF M + FEP + + +CA L A G++ H +L+ G +
Sbjct: 393 AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSL 452
Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
+ NA++ MY KCGV+ AR +F +P D +SW +IA G HG G +A+ + +M +
Sbjct: 453 SAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKK 512
Query: 554 GIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSE 613
GI PD ++ ++VL ACSH+GLVD+G ++F+ M I P +HYA ++DLL R+G S+
Sbjct: 513 GIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSD 572
Query: 614 AYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAE 673
A IE +P P A IW +LL GCR+H ++L A+ +F L P++ G Y+LL+N++A
Sbjct: 573 AESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAA 632
Query: 674 AEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE 733
+WEEV ++R+ + RG+KK CSWIE++ +V+ F+ +SHP A+ + L+ L E
Sbjct: 633 TGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKE 692
Query: 734 MKREGYFPKTRYALINAD-EMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGD 792
M+R GY P T + L + + + KE L HSEK+A+AFG++ LP G TIR+ KNLR CGD
Sbjct: 693 MRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGD 752
Query: 793 CHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
CH +F+S +R+I+LRD RFHHF++G CSC FW
Sbjct: 753 CHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/668 (37%), Positives = 384/668 (57%), Gaps = 30/668 (4%)
Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
YL K L + +Y KC R A+K+FD + +R+VVSW+ ++SG++
Sbjct: 31 YLLKSGSGLNLITSNYLIDMYCKC-------REPLMAYKVFDSMPERNVVSWSALMSGHV 83
Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
NG + L +F EM G + T T L C AL G +H F LK F +
Sbjct: 84 LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143
Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
N+L+DMYSKCG ++ A +VF ++ +RS++SW +MIAG+ G A+ F GM++E
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTF-GMMQEA 202
Query: 364 ---IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ--SSLYVSNALMDMYAKCGS 418
PD + +TS+L AC+ G++ GK +H ++ + SS ++ +L+D+Y KCG
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 419 MADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQ-NFEPDGVTMACILPA 467
+ A F+Q+ K ++SW+++I A+ LF + + N + D ++ I+
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322
Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
A A L +G+++ ++ + +V N++VDMY+KCG++ A F + KD+ISW
Sbjct: 323 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISW 382
Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
T++I GYG HG G ++ F +M + IEPDEV +++VL ACSHSG++ EG F+ +
Sbjct: 383 TVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAE 647
I+P++EHYAC+VDLL R G L EA I+ MP+ P+ IW +LL CR+H +++L +
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 502
Query: 648 KVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKV 707
+V + + ++ N YV+++N+Y +A W E RE + +GLKK G SW+EI+ +V
Sbjct: 503 EVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREV 562
Query: 708 NIFVAGGSSHPHAKKIESLLKRLRLEMKRE-GYFPKTRYALINADEMEKEVALCGHSEK- 765
+ F +G SHP I+ LK ++ E GY ++ L + D+ KE L HSEK
Sbjct: 563 HFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKL 622
Query: 766 ---LAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDG 822
LA+A G LN G+TIRV KNLRVC DCHE K +SK + V+RD+ RFH F+DG
Sbjct: 623 AIGLALATGGLN-QKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDG 681
Query: 823 RCSCRGFW 830
CSC +W
Sbjct: 682 CCSCGDYW 689
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/487 (29%), Positives = 243/487 (49%), Gaps = 50/487 (10%)
Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
SIL++C + G +VH + +SG ++ + + L+ M+ C + +VF+ +
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNL-ITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLK-------------- 206
V W+ LM + G+ K SL LF +M GI + +TFS LK
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 207 ---CLAV-------VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVA 248
CL + VGNS R+ +A K+F + DR ++SWN MI+G++ G
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 249 EKGLEVFKEM--LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF--SKEISF 304
K L+ F M N+ D T+ ++L C++ G + G+ +H F +++ F +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
+L+D+Y KCG L A + F+++ E++++SW+S+I GYA+EG F A+ LF+ +
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
+ D +A++SI+ A LL GK + + V N+++DMY KCG + +AE
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEK 369
Query: 425 VFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAA 473
F +M +KD++SW +I ++ +F ML+ N EPD V +L AC+
Sbjct: 370 CFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429
Query: 474 LERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLIS-WTIMI 531
++ G E+ +L HGI +VD+ + G L A+ L D +P K + W ++
Sbjct: 430 IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Query: 532 AGYGMHG 538
+ +HG
Sbjct: 490 SLCRVHG 496
Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 215/423 (50%), Gaps = 31/423 (7%)
Query: 269 TMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
+V++L C G G VH + LK+ + +N L+DMY KC + A +VF+ M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 329 GERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGK 388
ER+VVSW+++++G+ G G++ LF M R+GI P+ + ++ L AC LE G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 389 DVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG------ 442
+H + + + + V N+L+DMY+KCG + +AE VF ++ + ++SWN MI
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 443 ----ALDLFVAMLQNF----EPDGVTMACILPACASLAALERGREIHGYILRHGI--SAD 492
ALD F M+Q PD T+ +L AC+S + G++IHG+++R G +
Sbjct: 188 YGSKALDTF-GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
+ ++VD+YVKCG L AR FD I K +ISW+ +I GY G +A+ F +++
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYA--CMVDLLSRTGN 610
+ D + S++ + L+ +G + M + LE +VD+ + G
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQ---MQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 611 LSEAYR-FIEMMPVAPDATIWGSLLCGCRIH----HEVKLAEKVAEHVFELEPDNTGYYV 665
+ EA + F EM D W ++ G H V++ ++ H +EPD Y
Sbjct: 364 VDEAEKCFAEMQ--LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH--NIEPDEVCYLA 419
Query: 666 LLA 668
+L+
Sbjct: 420 VLS 422
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 162/393 (41%), Gaps = 77/393 (19%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKSKI----DTKTYCSILQLCADLKSLEDGKKVHS 120
++NA I F G KA++ +++ I D T S+L+ C+ + GK++H
Sbjct: 175 SWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 121 IICESGI-VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
+ SG + LV ++V CG L R+ F++I + W+ L+ Y++ G F
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294
Query: 180 KESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRR----------------------- 216
E++ LFK++Q L DS+ S ++ A R+
Sbjct: 295 VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSV 354
Query: 217 ---------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
V +A K F E+ +DV+SW +I+GY +G+ +K + +F EML D
Sbjct: 355 VDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDE 414
Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKA-CFSKEISFNNTLLDMYSKCGDLDGAIRVFE 326
+ VLS C++ G + G + + L+ + ++D+ + G L A + +
Sbjct: 415 VCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLID 474
Query: 327 KMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI 386
M I+P+V ++L C G +E+
Sbjct: 475 TM----------------------------------PIKPNVGIWQTLLSLCRVHGDIEL 500
Query: 387 GKDVHDYIKENDMQSSLYVSNALM--DMYAKCG 417
GK+V + D ++ +N +M ++Y + G
Sbjct: 501 GKEVGKILLRIDAKNP---ANYVMMSNLYGQAG 530
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 290/826 (35%), Positives = 437/826 (52%), Gaps = 63/826 (7%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSSE--KSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
++N+ I + + G+ A + S + S+ T+ S++ L D + + I+
Sbjct: 173 SWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTE-PDVRLLEQIM 231
Query: 123 C---ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNF 179
C +SG++ D V GS LV F G L R+VFN+++ N LM +
Sbjct: 232 CTIQKSGLLTDLFV-GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWG 290
Query: 180 KESLYLFKKMQSL-GIAADSYTF----------------------------SCVLKCLAV 210
+E+ LF M S+ ++ +SY + ++ +
Sbjct: 291 EEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVG 350
Query: 211 VGNSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG 262
+GN + DA ++F ++D+D VSWN MI+G NG + +E +K M
Sbjct: 351 IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHD 410
Query: 263 FNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAI 322
T+++ LS CA+ G+ +H +LK +S +N L+ +Y++ G L+
Sbjct: 411 ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECR 470
Query: 323 RVFEKMGERSVVSWTSMIAGYAR-EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACD 381
++F M E VSW S+I AR E A+ F R G + + +S+L A +
Sbjct: 471 KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 382 GLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP-VKDIVSWNTM 440
E+GK +H +N++ NAL+ Y KCG M E +F++M +D V+WN+M
Sbjct: 531 SFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 441 IG----------ALDLFVAMLQNFEP-DGVTMACILPACASLAALERGREIHGYILRHGI 489
I ALDL MLQ + D A +L A AS+A LERG E+H +R +
Sbjct: 591 ISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 650
Query: 490 SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFND 549
+D V +A+VDMY KCG L A F+ +P ++ SW MI+GY HG G +A+ F
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 550 MRQAG-IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRT 608
M+ G PD V+F+ VL ACSH+GL++EG++ F M + P++EH++CM D+L R
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRA 770
Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGC-RIH-HEVKLAEKVAEHVFELEPDNTGYYVL 666
G L + FIE MP+ P+ IW ++L C R + + +L +K AE +F+LEP+N YVL
Sbjct: 771 GELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVL 830
Query: 667 LANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESL 726
L N+YA +WE++ K R+K+ +KK G SW+ +K V++FVAG SHP A I
Sbjct: 831 LGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKK 890
Query: 727 LKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQT--IRVT 784
LK L +M+ GY P+T +AL + ++ KE L HSEKLA+AF +L T IR+
Sbjct: 891 LKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAF-VLAAQRSSTLPIRIM 949
Query: 785 KNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
KNLRVCGDCH K++SK R+I+LRDSNRFHHF+DG CSC FW
Sbjct: 950 KNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 170/663 (25%), Positives = 295/663 (44%), Gaps = 85/663 (12%)
Query: 77 GNLEKAMEVLYSSEKSKIDTKTYC--SILQLCADLKSLED--GKKVHSIICESGIVIDDG 132
G ++A+ L K I + Y S+L+ C ++ S+ G+++H ++ + +D
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD-A 139
Query: 133 VLGSKLVFMFVTC-GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
V+ + L+ M+ C G + F I+ WN ++ YS+ G+ + + +F MQ
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 192 LGIAADSYTFS---------------------CVLK-------------CLAVVGNSRRV 217
G YTF C ++ ++ S +
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLS-- 275
A K+F+++ R+ V+ N ++ G + E+ ++F +M N +V + V +LS
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSF 318
Query: 276 ---GCANCGALMFGRAVHAFALKACFSK-EISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
A L GR VH + + N L++MY+KCG + A RVF M ++
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVH 391
VSW SMI G + G F A+ ++ M R I P + + S L +CA ++G+ +H
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 392 DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAML 451
+ + ++ VSNALM +YA+ G + + +F+ MP D VSWN++IGAL A
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL----ARS 494
Query: 452 QNFEPDGVTMACILPACASLAALER------------------GREIHGYILRHGISADR 493
+ P+ V C L A + L R G++IHG L++ I+ +
Sbjct: 495 ERSLPEAVV--CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552
Query: 494 NVANAIVDMYVKCGVLVLARSLFD-MIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
NA++ Y KCG + +F M +D ++W MI+GY + A+ M Q
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ 612
Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEH----YACMVDLLSRT 608
G D + +VL A + ++ G M + C++ LE + +VD+ S+
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLERG-----MEVHACSVRACLESDVVVGSALVDMYSKC 667
Query: 609 GNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV---FELEPDNTGYYV 665
G L A RF MPV ++ W S++ G H + + A K+ E + + PD+ +
Sbjct: 668 GRLDYALRFFNTMPV-RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVG 726
Query: 666 LLA 668
+L+
Sbjct: 727 VLS 729
Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 225/451 (49%), Gaps = 24/451 (5%)
Query: 220 AHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCAN 279
A K+FDE+ R+ VSW C++SGY NG ++ L ++M+ G + V+VL C
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQE 114
Query: 280 CGA--LMFGRAVHAFALKACFSKEISFNNTLLDMYSKC-GDLDGAIRVFEKMGERSVVSW 336
G+ ++FGR +H K ++ + +N L+ MY KC G + A+ F + ++ VSW
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174
Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL-HACA-CDGLLEIGKDVHDYI 394
S+I+ Y++ G A R+F M +G P Y S++ AC+ + + + + + I
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 395 KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN-TMIG---------AL 444
+++ + + L+V + L+ +AK GS++ A VFNQM ++ V+ N M+G A
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 445 DLFVAM--LQNFEPDG-VTMACILP--ACASLAALERGREIHGYILRHG-ISADRNVANA 498
LF+ M + + P+ V + P + A L++GRE+HG+++ G + + N
Sbjct: 295 KLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD 558
+V+MY KCG + AR +F + KD +SW MI G +G +A+ + MR+ I P
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 559 EVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFI 618
+ IS L +C+ G + + I+ + ++ L + TG L+E +
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHG-ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 619 EMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
MP D W S++ G E L E V
Sbjct: 474 SSMP-EHDQVSWNSII-GALARSERSLPEAV 502
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/568 (24%), Positives = 249/568 (43%), Gaps = 58/568 (10%)
Query: 131 DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQ 190
D L + L+ ++ GD R+VF+++ W ++ YS+ G KE+L + M
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 191 SLGIAADSYTFSCVLKCLAVVGNSRRV--KDAHKL------------------------- 223
GI ++ Y F VL+ +G+ + + H L
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 224 --------FDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLG---FNVDLATMVT 272
F ++ ++ VSWN +IS Y G +F M G ++VT
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
+ + K+ ++ + L+ ++K G L A +VF +M R+
Sbjct: 215 TACSLTEPDVRLL-EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAI---TSILHACACDGLLEIGK 388
V+ ++ G R+ + A +LF M + P+ Y I + ++ A + L+ G+
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGR 333
Query: 389 DVHDYIKENDMQSSLY-VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDL- 446
+VH ++ + + + N L++MYAKCGS+ADA VF M KD VSWN+MI LD
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 447 --FVAMLQNFE--------PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVA 496
F+ ++ ++ P T+ L +CASL + G++IHG L+ GI + +V+
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS 453
Query: 497 NAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGC-DAIATFNDMRQAGI 555
NA++ +Y + G L R +F +P D +SW +I +A+ F + ++AG
Sbjct: 454 NALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ 513
Query: 556 EPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAY 615
+ + ++F SVL A S + G + + + + NI + ++ + G +
Sbjct: 514 KLNRITFSSVLSAVSSLSFGELG-KQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572
Query: 616 RFIEMMPVAPDATIWGSLLCGCRIHHEV 643
+ M D W S++ G IH+E+
Sbjct: 573 KIFSRMAERRDNVTWNSMISG-YIHNEL 599
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 170/372 (45%), Gaps = 23/372 (6%)
Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
R H+ K K++ N L++ Y + GD A +VF++M R+ VSW +++GY+R
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEI--GKDVHDYIKENDMQSSL 403
G A+ R MV+EGI + YA S+L AC G + I G+ +H + +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 404 YVSNALMDMYAKC-GSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAM-L 451
VSN L+ MY KC GS+ A F + VK+ VSWN++I A +F +M
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 452 QNFEPDGVTMACILPACASLAA--LERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
P T ++ SL + +I I + G+ D V + +V + K G L
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYAC 569
AR +F+ + ++ ++ ++ G +G +A F DM I+ S++ +L +
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSF 318
Query: 570 SHSGLVDE-----GWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVA 624
L +E G + ++ + +V++ ++ G++++A R M
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM-TD 377
Query: 625 PDATIWGSLLCG 636
D+ W S++ G
Sbjct: 378 KDSVSWNSMITG 389
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 149/332 (44%), Gaps = 34/332 (10%)
Query: 379 ACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWN 438
+C G + H + +N + +Y+ N L++ Y + G A VF++MP+++ VSW
Sbjct: 12 SCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWA 71
Query: 439 TMI------GALDLFVAMLQNFEPDGV-----TMACILPACASLAALE--RGREIHGYIL 485
++ G + L++ +G+ +L AC + ++ GR+IHG +
Sbjct: 72 CIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMF 131
Query: 486 RHGISADRNVANAIVDMYVKC-GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAI 544
+ + D V+N ++ MY KC G + A F I K+ +SW +I+ Y G A
Sbjct: 132 KLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAF 191
Query: 545 ATFNDMRQAGIEPDEVSFIS-VLYACSHSGLVDEGWRFFNMMRYECNIEPK-----LEHY 598
F+ M+ G P E +F S V ACS L + R + C I+ L
Sbjct: 192 RIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIM--CTIQKSGLLTDLFVG 246
Query: 599 ACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV---AEHVFE 655
+ +V +++G+LS A + M T+ G L+ G + A K+ + +
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNG-LMVGLVRQKWGEEATKLFMDMNSMID 305
Query: 656 LEPDNTGYYVLLANVYAEAEKWEEV--KKLRE 685
+ P++ YV+L + + E EEV KK RE
Sbjct: 306 VSPES---YVILLSSFPEYSLAEEVGLKKGRE 334
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 251/722 (34%), Positives = 388/722 (53%), Gaps = 82/722 (11%)
Query: 152 RRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV 211
RRVF++I +F WN L+ YSK G L +M+S
Sbjct: 61 RRVFDRIPQPNLFSWNNLLLAYSKAG-------LISEMES-------------------- 93
Query: 212 GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEML-NLGFNVDLATM 270
F++L DRD V+WN +I GY +G+ ++ + M+ + N+ T+
Sbjct: 94 -----------TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTL 142
Query: 271 VTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK---------------- 314
+T+L ++ G + G+ +H +K F + + LL MY+
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 315 ---------------CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
CG ++ A+++F M E+ VSW +MI G A+ G+ AI FR M
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSM 419
+G++ D Y S+L AC G + GK +H I + Q +YV +AL+DMY KC +
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 420 ADAESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPAC 468
A++VF++M K++VSW M+ A+ +F+ M ++ +PD T+ + AC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 469 ASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWT 528
A++++LE G + HG + G+ V+N++V +Y KCG + + LF+ + +D +SWT
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 529 IMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYE 588
M++ Y G + I F+ M Q G++PD V+ V+ ACS +GLV++G R+F +M E
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501
Query: 589 CNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEK 648
I P + HY+CM+DL SR+G L EA RFI MP PDA W +LL CR +++ +
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKW 561
Query: 649 VAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVN 708
AE + EL+P + Y LL+++YA KW+ V +LR + + +KK PG SWI+ KGK++
Sbjct: 562 AAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLH 621
Query: 709 IFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAM 768
F A S P+ +I + L+ L ++ GY P T + + +E K L HSE+LA+
Sbjct: 622 SFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAI 681
Query: 769 AFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
AFG++ +P+GQ IRV KNLRVC DCH K +S REI++RD+ RFH FKDG CSC
Sbjct: 682 AFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGD 741
Query: 829 FW 830
FW
Sbjct: 742 FW 743
Score = 211 bits (536), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 228/470 (48%), Gaps = 53/470 (11%)
Query: 76 VGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLG 135
VG KA + + + T ++L+L + + GK++H + + G ++G
Sbjct: 119 VGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE-SYLLVG 177
Query: 136 SKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIA 195
S L++M+ G + + ++VF +D+ ++N LM G +++L LF+ M+
Sbjct: 178 SPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME----- 232
Query: 196 ADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVF 255
+D VSW MI G NG+A++ +E F
Sbjct: 233 ----------------------------------KDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 256 KEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKC 315
+EM G +D +VL C GA+ G+ +HA ++ F I + L+DMY KC
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 316 GDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSIL 375
L A VF++M +++VVSWT+M+ GY + G + A+++F M R GI+PD Y + +
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 376 HACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
ACA LE G H + + + VSN+L+ +Y KCG + D+ +FN+M V+D V
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438
Query: 436 SWNTMIGA----------LDLFVAMLQN-FEPDGVTMACILPACASLAALERGREIHGYI 484
SW M+ A + LF M+Q+ +PDGVT+ ++ AC+ +E+G+ +
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Query: 485 L-RHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWTIMIA 532
+GI + ++D++ + G L A + +P D I WT +++
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 147/364 (40%), Gaps = 76/364 (20%)
Query: 93 KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
K+D + S+L C L ++ +GK++H+ I + D +GS L+ M+ C L +
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ-DHIYVGSALIDMYCKCKCLHYAK 325
Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV- 211
VF+++ V W ++ Y +TG +E++ +F MQ GI D YT + A V
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 212 -------------------------------GNSRRVKDAHKLFDELSDRDVVSWNCMIS 240
G + D+ +LF+E++ RD VSW M+S
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 241 GYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG-RAVHAFALKACFS 299
Y G A + +++F +M+ G D T+ V+S C+ G + G R +
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIV 505
Query: 300 KEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM 359
I + ++D++S+ G L+ A+R M
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGM------------------------------- 534
Query: 360 VREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND--------MQSSLYVSNALMD 411
PD T++L AC G LEIGK + + E D + SS+Y S D
Sbjct: 535 ---PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWD 591
Query: 412 MYAK 415
A+
Sbjct: 592 SVAQ 595
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 7/151 (4%)
Query: 465 LPACASLAALERGRE---IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
+ C L A + R IHG I+R + + N IV Y AR +FD IP
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
+L SW ++ Y G + +TF + + D V++ ++ S SGLV +
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
+N M + + M+ L S G++S
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVS 156
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/736 (33%), Positives = 392/736 (53%), Gaps = 48/736 (6%)
Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM--QSLGIAADSYT 200
V GD+ R +F+ + + V W +LM Y++ +F E+ LF++M S D T
Sbjct: 90 VKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVT 149
Query: 201 FSCVLKCL--AVVGNS--------------------------------RRVKDAHKLFDE 226
F+ +L AV N+ RR+ A LF+E
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 227 LSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFG 286
+ ++D V++N +I+GY +G+ + + +F +M G T VL G
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 287 RAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYARE 346
+ +HA ++ FS++ S N +LD YSK + +F++M E VS+ +I+ Y++
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 347 GVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS 406
++ ++ FR M G + + ++L A L++G+ +H S L+V
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 407 NALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLFVAML-QNFE 455
N+L+DMYAKC +AE +F +P + VSW +I L LF M N
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 456 PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSL 515
D T A +L A AS A+L G+++H +I+R G + + +VDMY KCG + A +
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
F+ +P ++ +SW +I+ + +G G AI F M ++G++PD VS + VL ACSH G V
Sbjct: 510 FEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFV 569
Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
++G +F M I PK +HYACM+DLL R G +EA + ++ MP PD +W S+L
Sbjct: 570 EQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLN 629
Query: 636 GCRIHHEVKLAEKVAEHVFELEP-DNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKK 694
CRIH LAE+ AE +F +E + YV ++N+YA A +WE+V+ +++ + RG+KK
Sbjct: 630 ACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKK 689
Query: 695 NPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
P SW+E+ K+++F + +HP+ +I + L E++REGY P T + + DE
Sbjct: 690 VPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQM 749
Query: 755 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 814
K +L HSE+LA+AF +++ P G I V KNLR C DCH K +SK +REI +RD++
Sbjct: 750 KIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTS 809
Query: 815 RFHHFKDGRCSCRGFW 830
RFHHF +G CSC +W
Sbjct: 810 RFHHFSEGVCSCGDYW 825
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 230/489 (47%), Gaps = 46/489 (9%)
Query: 95 DTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFM-FVTCGDLKEGRR 153
D T+ ++L C D +VH+ + G + + S ++ + L
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 154 VFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCL----- 208
+F +I +N L+ Y K G + ES++LF KM+ G +TFS VLK +
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 209 -------------------AVVGNS--------RRVKDAHKLFDELSDRDVVSWNCMISG 241
A VGN RV + LFDE+ + D VS+N +IS
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
Y E L F+EM +GF+ T+LS AN +L GR +H AL A
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
+ N+L+DMY+KC + A +F+ + +R+ VSWT++I+GY ++G+ ++LF M
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMAD 421
+ D ++L A A L +GK +H +I + +++ + L+DMYAKCGS+ D
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 422 AESVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACAS 470
A VF +MP ++ VSWN +I A+ F M+++ +PD V++ +L AC+
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 471 LAALERGRE-IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIP-AKDLISWT 528
+E+G E +GI+ + ++D+ + G A L D +P D I W+
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 529 IMIAGYGMH 537
++ +H
Sbjct: 626 SVLNACRIH 634
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 217/468 (46%), Gaps = 54/468 (11%)
Query: 216 RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM----------------- 258
+V A K++DE+ ++ VS N MISG++ G ++F M
Sbjct: 63 QVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYAR 122
Query: 259 ---LNLGFNV-------------DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE- 301
+ F + D T T+L GC + VHAFA+K F
Sbjct: 123 NSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNP 182
Query: 302 -ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
++ +N LL Y + LD A +FE++ E+ V++ ++I GY ++G++ +I LF M
Sbjct: 183 FLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR 242
Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
+ G +P + + +L A +G+ +H V N ++D Y+K +
Sbjct: 243 QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVL 302
Query: 421 DAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQ--------NFEPDGVTMACILPACA 469
+ +F++MP D VS+N +I + D + A L F+ A +L A
Sbjct: 303 ETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAA 362
Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
+L++L+ GR++H L + +V N++VDMY KC + A +F +P + +SWT
Sbjct: 363 NLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTA 422
Query: 530 MIAGY---GMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMR 586
+I+GY G+HG G + F MR + + D+ +F +VL A + + G + +
Sbjct: 423 LISGYVQKGLHGAG---LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFII 479
Query: 587 YECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLL 634
N+E + +VD+ ++ G++ +A + E MP +A W +L+
Sbjct: 480 RSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALI 525
Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 165/349 (47%), Gaps = 21/349 (6%)
Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG- 363
NT++ + K GD+ A +F+ M +R+VV+WT ++ YAR FD A +LFR M R
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 364 -IEPDVYAITSILHACACDGLLE--IGKDVHDYIKE--NDMQSSLYVSNALMDMYAKCGS 418
PD T++L C D + + +G+ VH + + D L VSN L+ Y +
Sbjct: 142 CTLPDHVTFTTLLPGCN-DAVPQNAVGQ-VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRR 199
Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPA 467
+ A +F ++P KD V++NT+I ++ LF+ M Q+ +P T + +L A
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
L G+++H + G S D +V N I+D Y K ++ R LFD +P D +S+
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
++I+ Y ++ F +M+ G + F ++L ++ + G R +
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG-RQLHCQAL 378
Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
+ L +VD+ ++ EA + +P + W +L+ G
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALISG 426
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 138/314 (43%), Gaps = 41/314 (13%)
Query: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTY--CSILQLCADLKSLEDGKKVHSII 122
+YN I + + E ++ + D + + ++L + A+L SL+ G+++H
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH--- 374
Query: 123 CESGIVIDDGVL--GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
C++ + D +L G+ LV M+ C +E +F + W L+ Y + G
Sbjct: 375 CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHG 434
Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVV----------------GNSRRV------- 217
L LF KM+ + AD TF+ VLK A GN V
Sbjct: 435 AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLV 494
Query: 218 ---------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 268
KDA ++F+E+ DR+ VSWN +IS + NG E + F +M+ G D
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554
Query: 269 TMVTVLSGCANCGALMFGRA-VHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEK 327
+++ VL+ C++CG + G A + + + +LD+ + G A ++ ++
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 328 MG-ERSVVSWTSMI 340
M E + W+S++
Sbjct: 615 MPFEPDEIMWSSVL 628
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 251/699 (35%), Positives = 393/699 (56%), Gaps = 38/699 (5%)
Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
G + E R++F+ D+ + WN ++ Y +++ LF +M I + + S +
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYM 90
Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
K + + +A K+FD + +R+VVSW ++ GY+ NG + +F +M V
Sbjct: 91 K-------NGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN-KV 142
Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT-LLDMYSKCGDLDGAIRV 324
M+ G L GR A L + + T ++ K G +D A +
Sbjct: 143 SWTVMLI--------GFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
F++M ERSV++WT+M+ GY + D A ++F M E + TS+L +G +
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRI 250
Query: 385 EIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-- 442
E +++ + + + NA++ + G +A A VF+ M ++ SW T+I
Sbjct: 251 EDAEELFEVMP----VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIH 306
Query: 443 --------ALDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADR 493
ALDLF+ M Q P T+ IL CASLA+L G+++H ++R D
Sbjct: 307 ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDV 366
Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA 553
VA+ ++ MY+KCG LV ++ +FD P+KD+I W +I+GY HG G +A+ F +M +
Sbjct: 367 YVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLS 426
Query: 554 G-IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLS 612
G +P+EV+F++ L ACS++G+V+EG + + M ++P HYACMVD+L R G +
Sbjct: 427 GSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFN 486
Query: 613 EAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYA 672
EA I+ M V PDA +WGSLL CR H ++ +AE A+ + E+EP+N+G Y+LL+N+YA
Sbjct: 487 EAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYA 546
Query: 673 EAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG-SSHPHAKKIESLLKRLR 731
+W +V +LR+ + R ++K+PGCSW E++ KV+ F GG +SHP + I +L L
Sbjct: 547 SQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELD 606
Query: 732 LEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCG 791
++ GY P YAL + DE EK +L HSE+LA+A+ +L L G IRV KNLRVC
Sbjct: 607 GLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCS 666
Query: 792 DCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
DCH K +SK REI+LRD+NRFHHF++G CSC+ +W
Sbjct: 667 DCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 153/340 (45%), Gaps = 59/340 (17%)
Query: 306 NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIE 365
N + S+ G + A ++F+ +S+ SW SM+AGY + A +LF M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 366 PD--VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
PD + + ++ +G ++ + V D + E ++ S AL+ Y G + AE
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS----WTALVKGYVHNGKVDVAE 130
Query: 424 SVFNQMPVKDIVSWNTMIGALDLFVAMLQNFE-PDGVTMACILPACASLAALERGREIHG 482
S+F +MP K+ VSW M+ + LQ+ D + ++P ++A R IHG
Sbjct: 131 SLFWKMPEKNKVSWTVML------IGFLQDGRIDDACKLYEMIPDKDNIA---RTSMIHG 181
Query: 483 YILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCD 542
K G + AR +FD + + +I+WT M+ GYG + D
Sbjct: 182 --------------------LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDD 221
Query: 543 AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC-- 600
A F+ M E EVS+ S+L +G +++ F +M ++P + AC
Sbjct: 222 ARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVM----PVKPVI---ACNA 270
Query: 601 MVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIH 640
M+ L + G +++A R + M DA+ W +++ +IH
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDAS-WQTVI---KIH 306
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 26/263 (9%)
Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQNFEP-------D 457
+N + ++ G + +A +F+ K I SWN+M+ N P D
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGY------FANLMPRDARKLFD 72
Query: 458 GVTMACILPACASLAALERGREIHGYILRHGISADRNVAN--AIVDMYVKCGVLVLARSL 515
+ I+ ++ + EI + +RNV + A+V YV G + +A SL
Sbjct: 73 EMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 516 FDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLV 575
F +P K+ +SWT+M+ G+ G DA + + + D ++ S+++ G V
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRV 188
Query: 576 DEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLC 635
DE F+ M E + + MV + + +A + ++MP + + W S+L
Sbjct: 189 DEAREIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WTSMLM 242
Query: 636 GCRIHHEVKLAEKVAEHVFELEP 658
G + ++ AE++ E V ++P
Sbjct: 243 GYVQNGRIEDAEELFE-VMPVKP 264
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 140/341 (41%), Gaps = 51/341 (14%)
Query: 98 TYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNK 157
T SIL +CA L SL GK+VH+ + +D V S L+ M++ CG+L + + +F++
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYV-ASVLMTMYIKCGELVKSKLIFDR 391
Query: 158 IDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSRR 216
+ + +WN ++ Y+ G +E+L +F +M G + TF L + G
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG---M 448
Query: 217 VKDAHKLFDELSD----RDVVS-WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
V++ K+++ + + + + + CM+ G + +E+ M D A
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT---VEPDAAVWG 505
Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT---LLDMYSKCGDLDGAIRVFEKM 328
++L C L V F K E + T L +MY+ G + + M
Sbjct: 506 SLLGACRTHSQL----DVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLM 561
Query: 329 GERSV-----VSWTSM---IAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACAC 380
R V SWT + + + R G+ P+ +I IL
Sbjct: 562 KTRLVRKSPGCSWTEVENKVHAFTRGGI--------------NSHPEQESILKILD--EL 605
Query: 381 DGLL-EIGKD------VHDYIKENDMQSSLYVSNALMDMYA 414
DGLL E G + +HD +E + S Y S L YA
Sbjct: 606 DGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYA 646
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 21/202 (10%)
Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
AN + + G + AR LFD +K + SW M+AGY + DA F++M
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
I +S+ ++ +G +DE + F++M E + + +V G + A
Sbjct: 79 I----ISWNGLVSGYMKNGEIDEARKVFDLMP-----ERNVVSWTALVKGYVHNGKVDVA 129
Query: 615 YRFIEMMPVAPDATIWGSLLCGC----RIHHEVKLAEKVAEHVFELEPDNTGYYVLLANV 670
MP + W +L G RI KL E + + DN ++ +
Sbjct: 130 ESLFWKMP-EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK------DNIARTSMIHGL 182
Query: 671 YAEAEKWEEVKKLREKISRRGL 692
E + +E +++ +++S R +
Sbjct: 183 CKEG-RVDEAREIFDEMSERSV 203
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/756 (33%), Positives = 398/756 (52%), Gaps = 57/756 (7%)
Query: 77 GNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVL 134
GN EKA+E+ + S K T +LQ+C++ + +G+++H + G+ + +
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMC 127
Query: 135 GSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI 194
S L+ M+ G L+ R+VFN + + + WN ++ Y+K G +++ L +M+ G+
Sbjct: 128 NS-LIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 195 AADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
D +V+WN ++SGY + G+++ + V
Sbjct: 187 KPD----------------------------------IVTWNSLLSGYASKGLSKDAIAV 212
Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
K M G +++ ++L A G L G+A+H + L+ ++ TL+DMY K
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIK 272
Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
G L A VF+ M +++V+W S+++G + + A L M +EGI+PD S+
Sbjct: 273 TGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332
Query: 375 LHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI 434
A G E DV +KE + ++ A+ +K G+ +A VF +M + +
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
Query: 435 VSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
P+ TM+ +L L+ L G+E+HG+ LR + D
Sbjct: 393 --------------------GPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAY 432
Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
VA A+VDMY K G L A +F I K L SW M+ GY M G G + IA F+ M +AG
Sbjct: 433 VATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAG 492
Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
+EPD ++F SVL C +SGLV EGW++F++MR I P +EH +CMVDLL R+G L EA
Sbjct: 493 MEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEA 552
Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
+ FI+ M + PDATIWG+ L C+IH +++LAE + + LEP N+ Y+++ N+Y+
Sbjct: 553 WDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNL 612
Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEM 734
+WE+V+++R + ++ SWI+I V+IF A G +HP I L +L EM
Sbjct: 613 NRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEM 672
Query: 735 KREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCH 794
K+ GY P T + + EKE L GH+EKLAM +G++ IRV KN +C D H
Sbjct: 673 KKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSH 732
Query: 795 EMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
+AK+MS REIVL++ R HHF+DG+CSC W
Sbjct: 733 TVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 142 bits (359), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 178/383 (46%), Gaps = 6/383 (1%)
Query: 66 YNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLCADLKSLEDGKKVHSIIC 123
+N+ + + G + A+ VL + + K T + S+LQ A+ L+ GK +H I
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
+ + D V + L+ M++ G L R VF+ +D + WN L+ S K++
Sbjct: 253 RNQLWYDVYV-ETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAE 311
Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA-HKLFDELSDRDVVSWNCMISGY 242
L +M+ GI D+ T++ + A +G + D K+ ++ +VVSW + SG
Sbjct: 312 ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGC 371
Query: 243 IANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEI 302
NG L+VF +M G + ATM T+L L G+ VH F L+ +
Sbjct: 372 SKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDA 431
Query: 303 SFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVRE 362
L+DMY K GDL AI +F + +S+ SW M+ GYA G + I F M+
Sbjct: 432 YVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEA 491
Query: 363 GIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMAD 421
G+EPD TS+L C GL++ G D ++ + ++ + ++D+ + G + +
Sbjct: 492 GMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDE 551
Query: 422 AESVFNQMPVK-DIVSWNTMIGA 443
A M +K D W + +
Sbjct: 552 AWDFIQTMSLKPDATIWGAFLSS 574
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 177/380 (46%), Gaps = 52/380 (13%)
Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDV 368
+ Y +C L A ++F++M +R ++W ++ R G ++ A+ LFR M G +
Sbjct: 30 MGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYD 89
Query: 369 YAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQ 428
+ +L C+ G+ +H Y+ ++S++ + N+L+ MY++ G + + VFN
Sbjct: 90 STMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNS 149
Query: 429 MPVKDIVSWN------TMIGALDLFVAMLQNFE-----PDGVTMACILPACAS------- 470
M +++ SWN T +G +D + +L E PD VT +L AS
Sbjct: 150 MKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDA 209
Query: 471 LAALER----------------------------GREIHGYILRHGISADRNVANAIVDM 502
+A L+R G+ IHGYILR+ + D V ++DM
Sbjct: 210 IAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDM 269
Query: 503 YVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSF 562
Y+K G L AR +FDM+ AK++++W +++G DA A M + GI+PD +++
Sbjct: 270 YIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW 329
Query: 563 ISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEMM 621
S+ + G ++ M+ E + P + + + S+ GN A + FI+M
Sbjct: 330 NSLASGYATLGKPEKALDVIGKMK-EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 622 P--VAPDATIWGSLL--CGC 637
V P+A +LL GC
Sbjct: 389 EEGVGPNAATMSTLLKILGC 408
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 165/372 (44%), Gaps = 63/372 (16%)
Query: 386 IGKDVHD-YIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI--- 441
+G +H IK S V +A M Y +C S+ A +F++MP +D ++WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 442 ---GALDLFVAMLQNFEPDGV-----TMACILPACASLAALERGREIHGYILRHGISADR 493
G + V + + + G TM +L C++ GR+IHGY+LR G+ ++
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 494 NVANAIVDMYVKCGVLVLARSLFDMIPAK------------------------------- 522
++ N+++ MY + G L L+R +F+ + +
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 523 ----DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVD-- 576
D+++W +++GY G DAIA M+ AG++P S S+L A + G +
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 577 ---EGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSL 633
G+ N + Y+ +E L +D+ +TG L A +MM A + W SL
Sbjct: 245 KAIHGYILRNQLWYDVYVETTL------IDMYIKTGYLPYARMVFDMMD-AKNIVAWNSL 297
Query: 634 LCGCRIHHEVKLAEKVAEHVFE--LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRG 691
+ G +K AE + + + ++PD + LA+ YA K E+ + K+ +G
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS-LASGYATLGKPEKALDVIGKMKEKG 356
Query: 692 LKKNPGCSWIEI 703
+ N SW I
Sbjct: 357 VAPNV-VSWTAI 367
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/571 (41%), Positives = 345/571 (60%), Gaps = 15/571 (2%)
Query: 273 VLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERS 332
+L CA GA+M +A H ++ +++ N L++ YSKCG ++ A +VF+ M ERS
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 333 VVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACA--CDGLLEIGKDV 390
+VSW +MI Y R + A+ +F M EG + + I+S+L AC CD L K +
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALE--CKKL 184
Query: 391 HDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG-------- 442
H + + +LYV AL+D+YAKCG + DA VF M K V+W++M+
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 443 --ALDLFV-AMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAI 499
AL L+ A + E + T++ ++ AC++LAAL G+++H I + G ++ VA++
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 500 VDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDE 559
VDMY KCG L + +F + K+L W +I+G+ H + + F M+Q G+ P+E
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 560 VSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIE 619
V+F S+L C H+GLV+EG RFF +MR + P + HY+CMVD+L R G LSEAY I+
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Query: 620 MMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEE 679
+P P A+IWGSLL CR++ ++LAE AE +FELEP+N G +VLL+N+YA ++WEE
Sbjct: 425 SIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEE 484
Query: 680 VKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGY 739
+ K R+ + +KK G SWI+IK KV+ F G S HP ++I S L L ++ ++ GY
Sbjct: 485 IAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGY 544
Query: 740 FPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKF 799
P + L + + +KE L HSEKLA+ FG++ LP +R+ KNLR+C DCHE K
Sbjct: 545 KPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKA 604
Query: 800 MSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
S RR I++RD NRFHHF DG CSC FW
Sbjct: 605 ASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 203/425 (47%), Gaps = 51/425 (12%)
Query: 70 IGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCS----------ILQLCADLKSLEDGKKVH 119
+ R +L + + VL S ++ ++ Y + ILQLCA ++ + K H
Sbjct: 25 LPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACH 84
Query: 120 SIICESGIVID---DGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKT 176
I I ID D L + L+ + CG ++ R+VF+ + + WN ++ Y++
Sbjct: 85 GKI----IRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRN 140
Query: 177 GNFKESLYLFKKMQSLGIAADSYTFSCVLK---------------CLAV---------VG 212
E+L +F +M++ G +T S VL CL+V VG
Sbjct: 141 RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVG 200
Query: 213 NSR--------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFN 264
+ +KDA ++F+ + D+ V+W+ M++GY+ N E+ L +++ +
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 265 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 324
+ T+ +V+ C+N AL+ G+ +HA K+ F + ++ +DMY+KCG L + +
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 325 FEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLL 384
F ++ E+++ W ++I+G+A+ + LF M ++G+ P+ +S+L C GL+
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 385 EIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVS-WNTMIG 442
E G+ ++ + ++ + ++D+ + G +++A + +P S W +++
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Query: 443 ALDLF 447
+ ++
Sbjct: 441 SCRVY 445
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/697 (35%), Positives = 387/697 (55%), Gaps = 35/697 (5%)
Query: 146 GDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL 205
G + E R+ F+ + + WN ++ Y G KE+ LF +M + + + S +
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 206 KCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV 265
K +R + +A +F+ + +R+VVSW M+ GY+ G+ + +F M
Sbjct: 91 K-------NRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER---- 139
Query: 266 DLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVF 325
+ + + G + G + R ++ K++ + ++ + G +D A +F
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIF 195
Query: 326 EKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLE 385
++M ER+VV+WT+MI GY + D A +LF M E + TS+L G +E
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIE 251
Query: 386 IGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGA-- 443
D ++ + M+ + NA++ + + G ++ A VF+ M +D +W MI A
Sbjct: 252 ---DAEEFFEVMPMKPVI-ACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYE 307
Query: 444 --------LDLFVAML-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRN 494
LDLF M Q P ++ IL CA+LA+L+ GR++H +++R D
Sbjct: 308 RKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVY 367
Query: 495 VANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAG 554
VA+ ++ MYVKCG LV A+ +FD +KD+I W +I+GY HG G +A+ F++M +G
Sbjct: 368 VASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSG 427
Query: 555 IEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEA 614
P++V+ I++L ACS++G ++EG F M + + P +EHY+C VD+L R G + +A
Sbjct: 428 TMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKA 487
Query: 615 YRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEA 674
IE M + PDAT+WG+LL C+ H + LAE A+ +FE EPDN G YVLL+++ A
Sbjct: 488 MELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASR 547
Query: 675 EKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGG-SSHPHAKKIESLLKRLRLE 733
KW +V +R+ + + K PGCSWIE+ KV++F GG +HP I +L++
Sbjct: 548 SKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGL 607
Query: 734 MKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDC 793
++ GY P + L + DE EK +L HSE+LA+A+G+L LP G IRV KNLRVCGDC
Sbjct: 608 LREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDC 667
Query: 794 HEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
H K +SK REI+LRD+NRFHHF +G CSCR +W
Sbjct: 668 HAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
++ F G++ + RRVF+ +++ W ++ Y + G E+L LF +MQ G+
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Query: 198 SYTFSCVLKCLAVVGNSRRVKDAHK--------------------------------LFD 225
+ +L A + + + + H +FD
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
S +D++ WN +ISGY ++G+ E+ L++F EM + G + T++ +L+ C+ G L
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 450
Query: 286 GRAV-HAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKM 328
G + + K C + + + +DM + G +D A+ + E M
Sbjct: 451 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM 494
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 49/321 (15%)
Query: 313 SKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAIT 372
S+ G ++ A + F+ + +++ SW S+++GY G+ A +LF M E +V +
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS----ERNVVSWN 83
Query: 373 SILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK 432
++ + ++ ++V + + E ++ S A++ Y + G + +AES+F +MP +
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVS----WTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 433 DIVSWNTMIGALDLFVAMLQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISAD 492
+ VSW M G L DG +++ R+++ + + A
Sbjct: 140 NEVSWTVMFGGLI----------DDG--------------RIDKARKLYDMMPVKDVVAS 175
Query: 493 RNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQ 552
N+ + + G + AR +FD + +++++WT MI GY + A F M
Sbjct: 176 TNMIGGL----CREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP- 230
Query: 553 AGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYAC--MVDLLSRTGN 610
E EVS+ S+L + SG +++ FF +M P AC M+ G
Sbjct: 231 ---EKTEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPVIACNAMIVGFGEVGE 280
Query: 611 LSEAYRFIEMMPVAPDATIWG 631
+S+A R ++M +AT G
Sbjct: 281 ISKARRVFDLMEDRDNATWRG 301
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 13/165 (7%)
Query: 101 SILQLCADLKSLEDGKKVHS--IICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKI 158
SIL +CA L SL+ G++VH+ + C+ DD + S L+ M+V CG+L + + VF++
Sbjct: 336 SILSVCATLASLQYGRQVHAHLVRCQFD---DDVYVASVLMTMYVKCGELVKAKLVFDRF 392
Query: 159 DNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVK 218
+ + +WN ++ Y+ G +E+L +F +M S G + T +L + G +++
Sbjct: 393 SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAG---KLE 449
Query: 219 DAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEM 258
+ ++F+ + + V+ ++C + G +K +E+ + M
Sbjct: 450 EGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM 494
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/601 (36%), Positives = 362/601 (60%), Gaps = 34/601 (5%)
Query: 250 KGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFN---- 305
+ ++ + + G D AT ++ C + RAVH L + + FN
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCIS------NRAVHEGNL---ICRHLYFNGHRP 94
Query: 306 -----NTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMV 360
N L++MY K L+ A ++F++M +R+V+SWT+MI+ Y++ + A+ L M+
Sbjct: 95 MMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML 154
Query: 361 REGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMA 420
R+ + P+VY +S+L +C +G+ ++ + +H I + ++S ++V +AL+D++AK G
Sbjct: 155 RDNVRPNVYTYSSVLRSC--NGMSDV-RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPE 211
Query: 421 DAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACA 469
DA SVF++M D + WN++IG AL+LF M + F + T+ +L AC
Sbjct: 212 DALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 271
Query: 470 SLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTI 529
LA LE G + H +I+++ D + NA+VDMY KCG L A +F+ + +D+I+W+
Sbjct: 272 GLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329
Query: 530 MIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYEC 589
MI+G +G+ +A+ F M+ +G +P+ ++ + VL+ACSH+GL+++GW +F M+
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389
Query: 590 NIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKV 649
I+P EHY CM+DLL + G L +A + + M PDA W +LL CR+ + LAE
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYA 449
Query: 650 AEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNI 709
A+ V L+P++ G Y LL+N+YA ++KW+ V+++R ++ RG+KK PGCSWIE+ +++
Sbjct: 450 AKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHA 509
Query: 710 FVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMA 769
F+ G +SHP ++ L +L + GY P+T + L + + + E +L HSEKLA+A
Sbjct: 510 FIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALA 569
Query: 770 FGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGF 829
FG++ LP + IR+ KNLR+CGDCH K SK R IV+RD R+HHF+DG+CSC +
Sbjct: 570 FGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDY 629
Query: 830 W 830
W
Sbjct: 630 W 630
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 205/422 (48%), Gaps = 62/422 (14%)
Query: 68 AEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIICES 125
+E R C +L +AM+ + S + + D+ TY +++ C +++ +G ++IC
Sbjct: 31 SEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEG----NLICRH 86
Query: 126 GIVIDDG-----VLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFK 180
+ +G L + L+ M+V L + ++F+++ V W ++ YSK +
Sbjct: 87 --LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQ 144
Query: 181 ESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRV----------------------- 217
++L L M + + YT+S VL+ + + R +
Sbjct: 145 KALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVF 204
Query: 218 ------KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMV 271
+DA +FDE+ D + WN +I G+ N ++ LE+FK M GF + AT+
Sbjct: 205 AKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264
Query: 272 TVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
+VL C L G H +K + +++ NN L+DMY KCG L+ A+RVF +M ER
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 332 SVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG---- 387
V++W++MI+G A+ G A++LF M G +P+ I +L AC+ GLLE G
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 382
Query: 388 ---KDVH--DYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVK-DIVSWNTMI 441
K ++ D ++E+ ++D+ K G + DA + N+M + D V+W T++
Sbjct: 383 RSMKKLYGIDPVREH--------YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Query: 442 GA 443
GA
Sbjct: 435 GA 436
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 201/419 (47%), Gaps = 61/419 (14%)
Query: 167 NLLMHEYSK---TGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA-------------- 209
LL+ E+++ + ++ +QS G+ ADS T+S ++KC
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86
Query: 210 VVGNSRR------------------VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
+ N R + DAH+LFD++ R+V+SW MIS Y + +K
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
LE+ ML ++ T +VL C + R +H +K ++ + L+D+
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDV 203
Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
++K G+ + A+ VF++M + W S+I G+A+ D A+ LF+ M R G + +
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263
Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
TS+L AC LLE+G H +I + D L ++NAL+DMY KCGS+ DA VFNQM
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKE 321
Query: 432 KDIVSWNTMIG----------ALDLFVAMLQN-FEPDGVTMACILPACASLAALERGREI 480
+D+++W+TMI AL LF M + +P+ +T+ +L AC+ LE G
Sbjct: 322 RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG--- 378
Query: 481 HGYILR-----HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAG 533
Y R +GI R ++D+ K G L A L + + + D ++W ++
Sbjct: 379 -WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 152/316 (48%), Gaps = 50/316 (15%)
Query: 80 EKAME--VLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSK 137
+KA+E VL + + + TY S+L+ C + D + +H I + G+ D + S
Sbjct: 144 QKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLE-SDVFVRSA 199
Query: 138 LVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAAD 197
L+ +F G+ ++ VF+++ G +WN ++ +++ +L LFK+M+ G A+
Sbjct: 200 LIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 259
Query: 198 SYTFSCVLK-----CLAVVGNSRRV-------------------------KDAHKLFDEL 227
T + VL+ L +G V +DA ++F+++
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 228 SDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGR 287
+RDV++W+ MISG NG +++ L++F+ M + G + T+V VL C++ G L G
Sbjct: 320 KERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG- 378
Query: 288 AVHAFALKACFSKEISFNN--TLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYA 344
+ ++K + + + ++D+ K G LD A+++ +M E V+W +++
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL---- 434
Query: 345 REGVFDGAIRLFRGMV 360
GA R+ R MV
Sbjct: 435 ------GACRVQRNMV 444
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 66 YNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSIIC 123
+N+ IG F + + A+E+ +++ + T S+L+ C L LE G + H I
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 124 ESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESL 183
+ D +L + LV M+ CG L++ RVFN++ V W+ ++ ++ G +E+L
Sbjct: 288 KYD---QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 184 YLFKKMQSLGIAADSYTFSCVL 205
LF++M+S G + T VL
Sbjct: 345 KLFERMKSSGTKPNYITIVGVL 366
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/624 (36%), Positives = 351/624 (56%), Gaps = 48/624 (7%)
Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSK 314
++ + ++G +D + + +L + AL G +H A K + +DMY+
Sbjct: 99 YQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYAS 158
Query: 315 CGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSI 374
CG ++ A VF++M R VV+W +MI Y R G+ D A +LF M + PD + +I
Sbjct: 159 CGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNI 218
Query: 375 LHACACDGLLEIGKDVHDYIKENDMQ-------------------------------SSL 403
+ AC G + + +++++ END++ +L
Sbjct: 219 VSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNL 278
Query: 404 YVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGAL---DLFVAMLQNFE----- 455
+VS A++ Y+KCG + DA+ +F+Q KD+V W TMI A D L+ FE
Sbjct: 279 FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS 338
Query: 456 ---PDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLA 512
PD V+M ++ ACA+L L++ + +H I +G+ ++ ++ NA+++MY KCG L
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398
Query: 513 RSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHS 572
R +F+ +P ++++SW+ MI MHG DA++ F M+Q +EP+EV+F+ VLY CSHS
Sbjct: 399 RDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHS 458
Query: 573 GLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGS 632
GLV+EG + F M E NI PKLEHY CMVDL R L EA IE MPVA + IWGS
Sbjct: 459 GLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGS 518
Query: 633 LLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
L+ CRIH E++L + A+ + ELEPD+ G VL++N+YA ++WE+V+ +R + + +
Sbjct: 519 LMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNV 578
Query: 693 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 752
K G S I+ GK + F+ G H + +I + L + ++K GY P L++ +E
Sbjct: 579 FKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEE 638
Query: 753 MEKEVALCGHSEKLAMAFGILNLPAGQ------TIRVTKNLRVCGDCHEMAKFMSKTARR 806
EK+ + HSEKLA+ FG++N + IR+ KNLRVC DCH K +SK R
Sbjct: 639 EEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYER 698
Query: 807 EIVLRDSNRFHHFKDGRCSCRGFW 830
EI++RD RFH +K+G CSCR +W
Sbjct: 699 EIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 16/224 (7%)
Query: 93 KIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
K D + S++ CA+L L+ K VHS I +G+ + + + L+ M+ CG L R
Sbjct: 341 KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSI-NNALINMYAKCGGLDATR 399
Query: 153 RVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVG 212
VF K+ V W+ +++ S G ++L LF +M+ + + TF VL +
Sbjct: 400 DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCS--- 456
Query: 213 NSRRVKDAHKLFDELSDRDVVS-----WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDL 267
+S V++ K+F ++D ++ + CM+ + + + LEV + M ++
Sbjct: 457 HSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM---PVASNV 513
Query: 268 ATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
+++S C G L G+ FA K E + L+ M
Sbjct: 514 VIWGSLMSACRIHGELELGK----FAAKRILELEPDHDGALVLM 553
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 438 bits (1126), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/659 (34%), Positives = 369/659 (55%), Gaps = 15/659 (2%)
Query: 184 YLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYI 243
+L + LG ++++ + ++ +V G+ V A +F+ + +D+V W ++S Y+
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGS---VDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 244 ANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEIS 303
NG E L++ M GF + T T L GA F + VH LK C+ +
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 304 FNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG 363
LL +Y++ GD+ A +VF +M + VV W+ MIA + + G + A+ LF M
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 364 IEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAE 423
+ P+ + ++SIL+ CA +G+ +H + + +YVSNAL+D+YAKC M A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 424 SVFNQMPVKDIVSWNTMI----------GALDLFVAMLQN-FEPDGVTMACILPACASLA 472
+F ++ K+ VSWNT+I A +F L+N VT + L ACASLA
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
+++ G ++HG ++ + V+N+++DMY KCG + A+S+F+ + D+ SW +I+
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
GY HG G A+ + M+ +P+ ++F+ VL CS++GL+D+G F M + IE
Sbjct: 524 GYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIE 583
Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
P LEHY CMV LL R+G L +A + IE +P P IW ++L + + A + AE
Sbjct: 584 PCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEE 643
Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
+ ++ P + YVL++N+YA A++W V +R+ + G+KK PG SWIE +G V+ F
Sbjct: 644 ILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSV 703
Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
G S HP K I +L+ L ++ R GY P L++ D+ EK+ L HSE+LA+A+G+
Sbjct: 704 GLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGL 763
Query: 773 LNLPAGQT-IRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
+ +P+ + I + KNLR+C DCH K +S +R++V+RD NRFHHF G CSC W
Sbjct: 764 VRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 232/496 (46%), Gaps = 49/496 (9%)
Query: 86 LYSS---EKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMF 142
LYS E +++ + S L+L L E +HS I + G + +G+ L+ +
Sbjct: 133 LYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLG-YDSNAFVGAALINAY 191
Query: 143 VTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFS 202
CG + R VF I + +W ++ Y + G F++SL L M+ G ++YTF
Sbjct: 192 SVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFD 251
Query: 203 CVLKC--------------------------------LAVVGNSRRVKDAHKLFDELSDR 230
LK L + + DA K+F+E+
Sbjct: 252 TALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN 311
Query: 231 DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVH 290
DVV W+ MI+ + NG + +++F M + T+ ++L+GCA G +H
Sbjct: 312 DVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLH 371
Query: 291 AFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFD 350
+K F +I +N L+D+Y+KC +D A+++F ++ ++ VSW ++I GY G
Sbjct: 372 GLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGG 431
Query: 351 GAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALM 410
A +FR +R + +S L ACA +++G VH + + + VSN+L+
Sbjct: 432 KAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLI 491
Query: 411 DMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAML-QNFEPDGV 459
DMYAKCG + A+SVFN+M D+ SWN +I AL + M ++ +P+G+
Sbjct: 492 DMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGL 551
Query: 460 TMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDM 518
T +L C++ +++G+E ++R HGI +V + + G L A L +
Sbjct: 552 TFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEG 611
Query: 519 IPAK-DLISWTIMIAG 533
IP + ++ W M++
Sbjct: 612 IPYEPSVMIWRAMLSA 627
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 203/435 (46%), Gaps = 19/435 (4%)
Query: 218 KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGC 277
KDA LFDE+ +R+ VS+ + GY + + ++ + G ++ + L
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGY----ACQDPIGLYSRLHREGHELNPHVFTSFLKLF 156
Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
+ +H+ +K + L++ YS CG +D A VFE + + +V W
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
+++ Y G F+ +++L M G P+ Y + L A G + K VH I +
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
V L+ +Y + G M+DA VFN+MP D+V W+ MI A+DLF
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 448 VAMLQNF-EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
+ M + F P+ T++ IL CA G ++HG +++ G D V+NA++D+Y KC
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVL 566
+ A LF + +K+ +SW +I GY G G A + F + + + EV+F S L
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456
Query: 567 YACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYR-FIEMMPVAP 625
AC+ +D G + + + N K+ ++D+ ++ G++ A F EM +
Sbjct: 457 GACASLASMDLGVQVHGLA-IKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI-- 513
Query: 626 DATIWGSLLCGCRIH 640
D W +L+ G H
Sbjct: 514 DVASWNALISGYSTH 528
Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 145/296 (48%), Gaps = 15/296 (5%)
Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
+A+H LK ++ N LL+ Y K G A+ +F++M ER+ VS+ ++ GYA
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC 127
Query: 346 EGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYV 405
+ I L+ + REG E + + TS L EI +H I + S+ +V
Sbjct: 128 QD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFV 183
Query: 406 SNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM-LQNF 454
AL++ Y+ CGS+ A +VF + KDIV W ++ +L L M + F
Sbjct: 184 GAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGF 243
Query: 455 EPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARS 514
P+ T L A L A + + +HG IL+ D V ++ +Y + G + A
Sbjct: 244 MPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFK 303
Query: 515 LFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACS 570
+F+ +P D++ W+ MIA + +GF +A+ F MR+A + P+E + S+L C+
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/565 (38%), Positives = 347/565 (61%), Gaps = 24/565 (4%)
Query: 287 RAVHAFALK-------ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER-SVVSWTS 338
R +HAF+++ A K + F L+ + S + A +VF K+ + +V W +
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIF--YLVSLPSP-PPMSYAHKVFSKIEKPINVFIWNT 90
Query: 339 MIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
+I GYA G A L+R M G +EPD + ++ A + +G+ +H + +
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLF 447
S +YV N+L+ +YA CG +A A VF++MP KD+V+WN++I AL L+
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 448 VAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 506
M + +PDG T+ +L ACA + AL G+ +H Y+++ G++ + + +N ++D+Y +C
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 507 GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMRQA-GIEPDEVSFISV 565
G + A++LFD + K+ +SWT +I G ++GFG +AI F M G+ P E++F+ +
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 566 LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 625
LYACSH G+V EG+ +F MR E IEP++EH+ CMVDLL+R G + +AY +I+ MP+ P
Sbjct: 331 LYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQP 390
Query: 626 DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 685
+ IW +LL C +H + LAE + +LEP+++G YVLL+N+YA ++W +V+K+R+
Sbjct: 391 NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRK 450
Query: 686 KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRY 745
++ R G+KK PG S +E+ +V+ F+ G SHP + I + LK + ++ EGY P+
Sbjct: 451 QMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISN 510
Query: 746 ALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTAR 805
++ +E EKE A+ HSEK+A+AF +++ P I V KNLRVC DCH K +SK
Sbjct: 511 VYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYN 570
Query: 806 REIVLRDSNRFHHFKDGRCSCRGFW 830
REIV+RD +RFHHFK+G CSC+ +W
Sbjct: 571 REIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 183 bits (465), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 198/375 (52%), Gaps = 40/375 (10%)
Query: 109 LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGD---LKEGRRVFNKIDNG-KVF 164
+ S+ +++H+ G+ I D LG L+F V+ + +VF+KI+ VF
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVF 86
Query: 165 IWNLLMHEYSKTGNFKESLYLFKKMQSLG-IAADSYTFSCVLKCLAVVGNSR-------- 215
IWN L+ Y++ GN + L+++M+ G + D++T+ ++K + + + R
Sbjct: 87 IWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 146
Query: 216 ------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKG 251
V A+K+FD++ ++D+V+WN +I+G+ NG E+
Sbjct: 147 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 206
Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
L ++ EM + G D T+V++LS CA GAL G+ VH + +K ++ + +N LLD+
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGM-VREGIEPDVYA 370
Y++CG ++ A +F++M +++ VSWTS+I G A G AI LF+ M EG+ P
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326
Query: 371 ITSILHACACDGLLEIGKDVHDYIKEN-DMQSSLYVSNALMDMYAKCGSMADAESVFNQM 429
IL+AC+ G+++ G + ++E ++ + ++D+ A+ G + A M
Sbjct: 327 FVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386
Query: 430 PVK-DIVSWNTMIGA 443
P++ ++V W T++GA
Sbjct: 387 PMQPNVVIWRTLLGA 401
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 189/371 (50%), Gaps = 27/371 (7%)
Query: 220 AHKLFDELSDR-DVVSWNCMISGYIANGVAEKGLEVFKEMLNLGF-NVDLATMVTVLSGC 277
AHK+F ++ +V WN +I GY G + +++EM G D T ++
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 278 ANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWT 337
+ G +H+ +++ F I N+LL +Y+ CGD+ A +VF+KM E+ +V+W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 338 SMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 397
S+I G+A G + A+ L+ M +GI+PD + I S+L ACA G L +GK VH Y+ +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 398 DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDLF 447
+ +L+ SN L+D+YA+CG + +A+++F++M K+ VSW ++I A++LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 448 VAM--LQNFEPDGVTMACILPACASLAALERGREIHGYILR----HGISADRNVANAIVD 501
M + P +T IL AC+ ++ G E Y R + I +VD
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFE---YFRRMREEYKIEPRIEHFGCMVD 368
Query: 502 MYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPD-- 558
+ + G + A +P + +++ W ++ +H G +A F ++ +EP+
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPNHS 426
Query: 559 -EVSFISVLYA 568
+ +S +YA
Sbjct: 427 GDYVLLSNMYA 437
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 159/361 (44%), Gaps = 52/361 (14%)
Query: 31 PSTLPIIVSSKSHSSCTINPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSE 90
PS P+ + K S PI+ I TL+ + Y AEIG +L + M V S
Sbjct: 64 PSPPPMSYAHKVFSKIE-KPINVFIWNTLI---RGY-AEIGNSISAFSLYREMRV---SG 115
Query: 91 KSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKE 150
+ DT TY +++ + + G+ +HS++ SG V S L+ ++ CGD+
Sbjct: 116 LVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNS-LLHLYANCGDVAS 174
Query: 151 GRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAV 210
+VF+K+ + WN +++ +++ G +E+L L+ +M S GI D +T +L A
Sbjct: 175 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 234
Query: 211 VG--------------------------------NSRRVKDAHKLFDELSDRDVVSWNCM 238
+G RV++A LFDE+ D++ VSW +
Sbjct: 235 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 294
Query: 239 ISGYIANGVAEKGLEVFKEMLNL-GFNVDLATMVTVLSGCANCGAL-----MFGRAVHAF 292
I G NG ++ +E+FK M + G T V +L C++CG + F R +
Sbjct: 295 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEY 354
Query: 293 ALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG-ERSVVSWTSMIAGYAREGVFDG 351
++ I ++D+ ++ G + A + M + +VV W +++ G D
Sbjct: 355 KIEP----RIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDL 410
Query: 352 A 352
A
Sbjct: 411 A 411
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 36/209 (17%)
Query: 451 LQNFEPDGVTMACILPACASL------AALERGREIHGYILRHGIS-ADRNVANAIVDMY 503
+ F V + ++ C +L +++ + R+IH + +RHG+S +D + ++
Sbjct: 1 MSPFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYL 60
Query: 504 VKC---GVLVLARSLFDMIPAK-DLISWTIMIAGYGMHGFGCDAIATFNDMRQAG-IEPD 558
V + A +F I ++ W +I GY G A + + +MR +G +EPD
Sbjct: 61 VSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPD 120
Query: 559 EVSFISVLYACS-----------HSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSR 607
++ ++ A + HS ++ G F + Y N ++ L +
Sbjct: 121 THTYPFLIKAVTTMADVRLGETIHSVVIRSG---FGSLIYVQN---------SLLHLYAN 168
Query: 608 TGNLSEAYRFIEMMPVAPDATIWGSLLCG 636
G+++ AY+ + MP D W S++ G
Sbjct: 169 CGDVASAYKVFDKMP-EKDLVAWNSVING 196
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/730 (32%), Positives = 397/730 (54%), Gaps = 47/730 (6%)
Query: 64 KNYNAEIGRFCEVGNLEKAMEVLYSSEKSKI--DTKTYCSILQLCADLKSLEDGKKVHSI 121
+ +N+ I F G L +A+ + + D T+ +++ C LK+ + +
Sbjct: 104 RPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDT 163
Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
+ G+ ++ V S L+ ++ G + ++F+++ IWN++++ Y+K G
Sbjct: 164 VSSLGMDCNEFV-ASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS 222
Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKC--------------------------------LA 209
+ F M+ I+ ++ TF CVL L+
Sbjct: 223 VIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLS 282
Query: 210 VVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLAT 269
+ R DA KLF +S D V+WNCMISGY+ +G+ E+ L F EM++ G D T
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342
Query: 270 MVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMG 329
++L + L + + +H + ++ S +I + L+D Y KC + A +F +
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402
Query: 330 ERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKD 389
VV +T+MI+GY G++ ++ +FR +V+ I P+ + SIL L++G++
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE 462
Query: 390 VHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI-------- 441
+H +I + + + A++DMYAKCG M A +F ++ +DIVSWN+MI
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 442 --GALDLFVAM-LQNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANA 498
A+D+F M + D V+++ L ACA+L + G+ IHG++++H +++D +
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSEST 582
Query: 499 IVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEP 557
++DMY KCG L A ++F + K+++SW +IA G HG D++ F++M ++GI P
Sbjct: 583 LIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRP 642
Query: 558 DEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRF 617
D+++F+ ++ +C H G VDEG RFF M + I+P+ EHYAC+VDL R G L+EAY
Sbjct: 643 DQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYET 702
Query: 618 IEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKW 677
++ MP PDA +WG+LL CR+H V+LAE + + +L+P N+GYYVL++N +A A +W
Sbjct: 703 VKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREW 762
Query: 678 EEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
E V K+R + R ++K PG SWIEI + ++FV+G +HP + I SLL L E++ E
Sbjct: 763 ESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLE 822
Query: 738 GYFPKTRYAL 747
GY P+ L
Sbjct: 823 GYIPQPYLPL 832
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/642 (25%), Positives = 297/642 (46%), Gaps = 51/642 (7%)
Query: 102 ILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKID-- 159
+LQ C++ L GK+VH+ + + I D +++ M+ CG + ++F ++D
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSIS-GDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 160 NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR---- 215
+ WN ++ + + G ++L + KM G++ D TF C++K + N +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 216 ----------------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGV 247
++ KLFD + +D V WN M++GY G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 248 AEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNT 307
+ ++ F M + + T VLS CA+ + G +H + + E S N+
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPD 367
LL MYSKCG D A ++F M V+W MI+GY + G+ + ++ F M+ G+ PD
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 368 VYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFN 427
+S+L + + LE K +H YI + + +++++AL+D Y KC ++ A+++F+
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 428 QMPVKDIVSWNTMIGAL---DLFVAMLQNFE--------PDGVTMACILPACASLAALER 476
Q D+V + MI L++ L+ F P+ +T+ ILP L AL+
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459
Query: 477 GREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGM 536
GRE+HG+I++ G N+ A++DMY KCG + LA +F+ + +D++SW MI
Sbjct: 460 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQ 519
Query: 537 HGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEPKLE 596
AI F M +GI D VS + L AC++ G M + ++ +
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM-IKHSLASDVY 578
Query: 597 HYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHVFE- 655
+ ++D+ ++ GNL A + M + W S++ C H ++K + + + E
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637
Query: 656 --LEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKN 695
+ PD + ++++ + E V+ R G++
Sbjct: 638 SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQ 679
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 156/345 (45%), Gaps = 34/345 (9%)
Query: 371 ITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 430
++ +L AC+ LL GK VH ++ N + Y ++ MYA CGS +D +F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 431 VK--DIVSWNTMIG----------ALDLFVAML-QNFEPDGVTMACILPACASLAALERG 477
++ I WN++I AL + ML PD T C++ AC +L +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 478 REIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMH 537
+ + G+ + VA++++ Y++ G + + LFD + KD + W +M+ GY
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 538 GFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNM-----MRYECNIE 592
G I F+ MR I P+ V+F VL C+ L+D G + + + +E +I+
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
L + + S+ G +A + MM A D W ++ G + + L E+
Sbjct: 278 NSL------LSMYSKCGRFDDASKLFRMMSRA-DTVTWNCMISG---YVQSGLMEESLTF 327
Query: 653 VFEL-----EPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGL 692
+E+ PD + LL +V ++ E E K++ I R +
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSV-SKFENLEYCKQIHCYIMRHSI 371
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/703 (34%), Positives = 386/703 (54%), Gaps = 70/703 (9%)
Query: 101 SILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDN 160
S L+L ADL S D ++ D + SKL ++V + F+
Sbjct: 5 SFLKLAADLSSFTDSSPFAKLL--------DSCIKSKLSAIYVRYVHASVIKSGFSN--- 53
Query: 161 GKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDA 220
++FI N L+ YSK G+ ++ +F KM I YT++ V+ L +G + +A
Sbjct: 54 -EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNI----YTWNSVVTGLTKLG---FLDEA 105
Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
LF + +RD +WN M+SG+ + E+ L F M GF ++ + +VLS C+
Sbjct: 106 DSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGL 165
Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
+ G VH+ K+ F ++ + L+DMYSKCG+++ A RVF++MG+R+VVSW S+I
Sbjct: 166 NDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225
Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKEND-M 399
+ + G A+ +F+ M+ +EPD + S++ ACA +++G++VH + +ND +
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285
Query: 400 QSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDI------------------------- 434
++ + +SNA +DMYAKC + +A +F+ MP++++
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345
Query: 435 ------VSWNTMIG----------ALDLFVAM-LQNFEPDGVTMACILPACASLAALERG 477
VSWN +I AL LF + ++ P + A IL ACA LA L G
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 478 REIHGYILRHGI------SADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMI 531
+ H ++L+HG D V N+++DMYVKCG + +F + +D +SW MI
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465
Query: 532 AGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNI 591
G+ +G+G +A+ F +M ++G +PD ++ I VL AC H+G V+EG +F+ M + +
Sbjct: 466 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 525
Query: 592 EPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAE 651
P +HY CMVDLL R G L EA IE MP+ PD+ IWGSLL C++H + L + VAE
Sbjct: 526 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAE 585
Query: 652 HVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFV 711
+ E+EP N+G YVLL+N+YAE KWE+V +R+ + + G+ K PGCSWI+I+G ++F+
Sbjct: 586 KLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFM 645
Query: 712 AGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEME 754
SHP K+I SLL L EM+ E T ++++EM+
Sbjct: 646 VKDKSHPRKKQIHSLLDILIAEMRPEQ--DHTEIGSLSSEEMD 686
Score = 163 bits (412), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 205/453 (45%), Gaps = 75/453 (16%)
Query: 65 NYNAEIGRFCEVGNLEKAM--EVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122
+N+ + F + E+A+ + E ++ ++ S+L C+ L + G +VHS+I
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
+S + D +GS LV M+ CG++ + +RVF+++ + V WN L+ + + G E+
Sbjct: 179 AKSPF-LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237
Query: 183 LYLFKKMQSLGIAADSYTFSCVLKCLA--------------VVGNSR------------- 215
L +F+ M + D T + V+ A VV N +
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 216 ------RVKDAHKLFD-------------------------------ELSDRDVVSWNCM 238
R+K+A +FD ++++R+VVSWN +
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
I+GY NG E+ L +F + + +L CA+ L G H LK F
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417
Query: 299 ------SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGA 352
+I N+L+DMY KCG ++ VF KM ER VSW +MI G+A+ G + A
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVS-NALMD 411
+ LFR M+ G +PD + +L AC G +E G+ + + + L ++D
Sbjct: 478 LELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 412 MYAKCGSMADAESVFNQMPVK-DIVSWNTMIGA 443
+ + G + +A+S+ +MP++ D V W +++ A
Sbjct: 538 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust.
Identities = 249/689 (36%), Positives = 380/689 (55%), Gaps = 48/689 (6%)
Query: 94 IDTKTYCSILQLCAD-LKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGR 152
+++ S+L+ C + KSL K VH I G+ D VL L+ ++ TC D R
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLR-RDVVLCKSLINVYFTCKDHCSAR 59
Query: 153 RVFNKID-NGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGI-AADSYTFSCVLK---- 206
VF D V+IWN LM YSK F ++L +FK++ + I DS+TF V+K
Sbjct: 60 HVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGA 119
Query: 207 --------------------CLAVVGNS--------RRVKDAHKLFDELSDRDVVSWNCM 238
C VV +S +++ ++FDE+ +RDV SWN +
Sbjct: 120 LGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTV 179
Query: 239 ISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF 298
IS + +G AEK LE+F M + GF + ++ +S C+ L G+ +H +K F
Sbjct: 180 ISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF 239
Query: 299 SKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRG 358
+ N+ L+DMY KC L+ A VF+KM +S+V+W SMI GY +G + +
Sbjct: 240 ELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNR 299
Query: 359 MVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGS 418
M+ EG P +TSIL AC+ L GK +H Y+ + + + +YV+ +L+D+Y KCG
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 419 MADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPA 467
AE+VF++ SWN MI A++++ M+ +PD VT +LPA
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 468 CASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISW 527
C+ LAALE+G++IH I + D + +A++DMY KCG A +F+ IP KD++SW
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSW 479
Query: 528 TIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRY 587
T+MI+ YG HG +A+ F++M++ G++PD V+ ++VL AC H+GL+DEG +FF+ MR
Sbjct: 480 TVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRS 539
Query: 588 ECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPD-ATIWGSLLCGCRIHHEVKLA 646
+ IEP +EHY+CM+D+L R G L EAY I+ P D A + +L C +H E L
Sbjct: 540 KYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLG 599
Query: 647 EKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGK 706
+++A + E PD+ Y++L N+YA E W+ +++R K+ GL+K PGCSWIE+ K
Sbjct: 600 DRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDK 659
Query: 707 VNIFVAGGSSHPHAKKIESLLKRLRLEMK 735
V F A SH A+ + L L M+
Sbjct: 660 VCHFFAEDRSHLRAENVYECLALLSGHME 688
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 24/304 (7%)
Query: 53 ASISKTLVCKTK-----NYNAEIGRFCEVGNLEKAMEVL--YSSEKSKIDTKTYCSILQL 105
A++++T+ KT+ ++N I + VGN KA+EV S K D T+ S+L
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 106 CADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFI 165
C+ L +LE GK++H I ES + D+ +L S L+ M+ CG+ KE R+FN I V
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLL-SALLDMYSKCGNEKEAFRIFNSIPKKDVVS 478
Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFD 225
W +++ Y G +E+LY F +MQ G+ D T +L L+ G++ + + K F
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT---LLAVLSACGHAGLIDEGLKFFS 535
Query: 226 ELSDRD-----VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
++ + + ++CMI G + E+ ++ N +L + T+ S C
Sbjct: 536 QMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAEL--LSTLFSACCLH 593
Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSV-----VS 335
G + A L + + S L ++Y+ D A RV KM E + S
Sbjct: 594 LEHSLGDRI-ARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCS 652
Query: 336 WTSM 339
W M
Sbjct: 653 WIEM 656
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/610 (36%), Positives = 339/610 (55%), Gaps = 21/610 (3%)
Query: 235 WNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFAL 294
WN + + + + +++ ML G + D + +L CA+ + G+ +H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 295 KACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVS--WTSMIAGYAREGVFDGA 352
K E L+ MY KCG + A +VFE+ + S +S + ++I+GY A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 353 IRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDM 412
+FR M G+ D + ++ C L +G+ +H + + S + V N+ + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 413 YAKCGSMADAESVFNQMPVKDIVSWNTMIGALD---LFVAMLQNFE--------PDGVTM 461
Y KCGS+ +F++MPVK +++WN +I L +L+ +E PD T+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 462 ACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPA 521
+L +CA L A + G E+ + +G + V+NA + MY +CG L AR++FD++P
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 522 KDLISWTIMIAGYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRF 581
K L+SWT MI YGMHG G + F+DM + GI PD F+ VL ACSHSGL D+G
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 582 FNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHH 641
F M+ E +EP EHY+C+VDLL R G L EA FIE MPV PD +WG+LL C+IH
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 642 EVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWI 701
V +AE V E EP+N GYYVL++N+Y++++ E + ++R + R +K PG S++
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Query: 702 EIKGKVNIFVAGGSSHPHAKKIESLLKRLRLE-MKREGYFPKTRYALINADEMEKEVALC 760
E KG+V++F+AG SH +++ +L L M+ G R +++ E
Sbjct: 501 EHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEEVSSTTRE------ 554
Query: 761 GHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFK 820
HSE+LA+AFGILN G I V KNLRVC DCH K +SK R+ V+RD++RFH+FK
Sbjct: 555 -HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFK 613
Query: 821 DGRCSCRGFW 830
DG CSC+ +W
Sbjct: 614 DGVCSCKDYW 623
Score = 189 bits (481), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 221/469 (47%), Gaps = 50/469 (10%)
Query: 166 WNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC-----LAVVGNSRR---- 216
WN+ + E + F ES+ L++ M G + D+++F +LK L V G
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 217 -----------------------VKDAHKLFDE--LSDRDVVSWNCMISGYIANGVAEKG 251
V DA K+F+E S + V +N +ISGY AN
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 252 LEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDM 311
+F+ M G +VD TM+ ++ C L GR++H +K E++ N+ + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 312 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 371
Y KCG ++ R+F++M + +++W ++I+GY++ G+ + L+ M G+ PD + +
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 372 TSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPV 431
S+L +CA G +IG +V ++ N +++VSNA + MYA+CG++A A +VF+ MPV
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 432 KDIVSWNTMIG----------ALDLFVAMLQ-NFEPDGVTMACILPACASLAALERGREI 480
K +VSW MIG L LF M++ PDG +L AC+ ++G E+
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 481 HGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAK-DLISWTIMIAGYGMHG 538
+ R + + + +VD+ + G L A + +P + D W ++ +H
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 539 FGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEG-WRFFNMMR 586
A F + + EP+ + + ++ EG WR MMR
Sbjct: 441 NVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMR 487
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 197/413 (47%), Gaps = 46/413 (11%)
Query: 92 SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151
S D ++ IL+ CA L G+++H + + G + VL + L+ M+ CG + +
Sbjct: 49 SSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVL-TALISMYCKCGLVADA 107
Query: 152 RRVF--NKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTF-------- 201
R+VF N + +N L+ Y+ ++ Y+F++M+ G++ DS T
Sbjct: 108 RKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCT 167
Query: 202 -------------SCV---LKCLAVVGNS--------RRVKDAHKLFDELSDRDVVSWNC 237
CV L V NS V+ +LFDE+ + +++WN
Sbjct: 168 VPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNA 227
Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
+ISGY NG+A LE++++M + G D T+V+VLS CA+ GA G V
Sbjct: 228 VISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNG 287
Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFR 357
F + +N + MY++CG+L A VF+ M +S+VSWT+MI Y G+ + + LF
Sbjct: 288 FVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFD 347
Query: 358 GMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKC 416
M++ GI PD +L AC+ GL + G ++ +K E ++ + L+D+ +
Sbjct: 348 DMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRA 407
Query: 417 GSMADAESVFNQMPVK-DIVSWNTMIGA---------LDLFVAMLQNFEPDGV 459
G + +A MPV+ D W ++GA +L A + FEP+ +
Sbjct: 408 GRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNI 460
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 143/317 (45%), Gaps = 47/317 (14%)
Query: 49 NPISASISKTLVCKTKNYNAEIGRFCEVGNLEKAMEVLYSSEKS--KIDTKTYCSILQLC 106
NP S+ +S VC YNA I + + A + +++ +D+ T ++ LC
Sbjct: 114 NPQSSQLS---VC----YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLC 166
Query: 107 ADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIW 166
+ L G+ +H + G+ + VL S + M++ CG ++ GRR+F+++ + W
Sbjct: 167 TVPEYLWLGRSLHGQCVKGGLDSEVAVLNS-FITMYMKCGSVEAGRRLFDEMPVKGLITW 225
Query: 167 NLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSR----------- 215
N ++ YS+ G + L L+++M+S G+ D +T VL A +G +
Sbjct: 226 NAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVES 285
Query: 216 ---------------------RVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEV 254
+ A +FD + + +VSW MI Y +G+ E GL +
Sbjct: 286 NGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLML 345
Query: 255 FKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAF-ALKACFSKEISFNN--TLLDM 311
F +M+ G D A V VLS C++ G + + + F A+K + E + L+D+
Sbjct: 346 FDDMIKRGIRPDGAVFVMVLSACSHSG--LTDKGLELFRAMKREYKLEPGPEHYSCLVDL 403
Query: 312 YSKCGDLDGAIRVFEKM 328
+ G LD A+ E M
Sbjct: 404 LGRAGRLDEAMEFIESM 420
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/722 (33%), Positives = 377/722 (52%), Gaps = 59/722 (8%)
Query: 157 KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC--------- 207
KI + + + NL + SK E+ ++M G++ SY++ C+ +
Sbjct: 42 KISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH 101
Query: 208 -----------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISGYIA 244
L + R ++DA KLFDE+S+ + VS MIS Y
Sbjct: 102 GRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAE 161
Query: 245 NGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISF 304
G+ +K + +F ML G + T+L N AL FGR +HA ++A S
Sbjct: 162 QGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSI 221
Query: 305 NNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGI 364
+++MY KCG L GA RVF++M + V+ T ++ GY + G A++LF +V EG+
Sbjct: 222 ETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGV 281
Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
E D + + +L ACA L +GK +H + + ++S + V L+D Y KC S A
Sbjct: 282 EWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACR 341
Query: 425 VFNQMPVKDIVSWNTMIGA---LDLFVAMLQNFEP---------DGVTMACILPACASLA 472
F ++ + VSW+ +I + F ++ F+ + T I AC+ LA
Sbjct: 342 AFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLA 401
Query: 473 ALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIA 532
G ++H ++ + + +A++ MY KCG L A +F+ + D+++WT I+
Sbjct: 402 DCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFIS 461
Query: 533 GYGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIE 592
G+ +G +A+ F M G++P+ V+FI+VL ACSH+GLV++G + M + N+
Sbjct: 462 GHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVA 521
Query: 593 PKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEH 652
P ++HY CM+D+ +R+G L EA +F++ MP PDA W L GC H ++L E E
Sbjct: 522 PTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEE 581
Query: 653 VFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVA 712
+ +L+P++T YVL N+Y A KWEE ++ + ++ R LKK CSWI+ KGK++ F+
Sbjct: 582 LRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIV 641
Query: 713 GGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
G HP ++I LK M+ + + + E+ L HSE+LA+AFG+
Sbjct: 642 GDKHHPQTQEIYEKLKEFDGFMEGD---------MFQCNMTERREQLLDHSERLAIAFGL 692
Query: 773 L----NLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRG 828
+ N PA I+V KNLR C DCHE AK +S EIV+RDS RFHHFK+G+CSC
Sbjct: 693 ISVHGNAPA--PIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCND 750
Query: 829 FW 830
+W
Sbjct: 751 YW 752
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 214/454 (47%), Gaps = 61/454 (13%)
Query: 70 IGRFCEVGNLEKAMEVLYS--SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGI 127
I + E G L+KA+ + + K + Y ++L+ + ++L+ G+++H+ + +G+
Sbjct: 156 ISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGL 215
Query: 128 VIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFK 187
+ + + +V M+V CG L +RVF+++ K LM Y++ G +++L LF
Sbjct: 216 CSNTSI-ETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFV 274
Query: 188 KMQSLGIAADSYTFSCVLK----------------CLAVVGNSRRV-------------- 217
+ + G+ DS+ FS VLK C+A +G V
Sbjct: 275 DLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCS 334
Query: 218 --KDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNV-DLATMVTVL 274
+ A + F E+ + + VSW+ +ISGY E+ ++ FK + + ++ + T ++
Sbjct: 335 SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIF 394
Query: 275 SGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVV 334
C+ G VHA A+K + L+ MYSKCG LD A VFE M +V
Sbjct: 395 QACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIV 454
Query: 335 SWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHD-Y 393
+WT+ I+G+A G A+RLF MV G++P+ ++L AC+ GL+E GK D
Sbjct: 455 AWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTM 514
Query: 394 IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGALDLFVAMLQN 453
+++ ++ ++ + ++D+YA+ G + +A MP
Sbjct: 515 LRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMP----------------------- 551
Query: 454 FEPDGVTMACILPACASLAALERGREIHGYILRH 487
FEPD ++ C L C + LE G EI G LR
Sbjct: 552 FEPDAMSWKCFLSGCWTHKNLELG-EIAGEELRQ 584
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 14/274 (5%)
Query: 65 NYNAEIGRFCEVGNLEKAMEV---LYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSI 121
+++A I +C++ E+A++ L S S +++ TY SI Q C+ L G +VH+
Sbjct: 353 SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD 412
Query: 122 ICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKE 181
+ + I S L+ M+ CG L + VF +DN + W + ++ GN E
Sbjct: 413 AIKRSL-IGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASE 471
Query: 182 SLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNSRRVKDAHKLFDELSDRDVVS----WNC 237
+L LF+KM S G+ +S TF VL + G + K H L L +V ++C
Sbjct: 472 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK--HCLDTMLRKYNVAPTIDHYDC 529
Query: 238 MISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKAC 297
MI Y +G+ ++ L+ K N+ F D + LSGC L G + L+
Sbjct: 530 MIDIYARSGLLDEALKFMK---NMPFEPDAMSWKCFLSGCWTHKNLELGE-IAGEELRQL 585
Query: 298 FSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGER 331
++ + ++Y+ G + A + + M ER
Sbjct: 586 DPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNER 619
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/623 (36%), Positives = 349/623 (56%), Gaps = 16/623 (2%)
Query: 221 HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 280
H+ F V+ IS +NG + E EM LG + +L+ C +
Sbjct: 9 HRSFSSSPTNYVLQTILPISQLCSNGRLQ---EALLEMAMLGPEMGFHGYDALLNACLDK 65
Query: 281 GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMI 340
AL G+ VHA +K + LL Y KC L+ A +V ++M E++VVSWT+MI
Sbjct: 66 RALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 125
Query: 341 AGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQ 400
+ Y++ G A+ +F M+R +P+ + ++L +C L +GK +H I + +
Sbjct: 126 SRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185
Query: 401 SSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAM 450
S ++V ++L+DMYAK G + +A +F +P +D+VS +I AL++F +
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Query: 451 L-QNFEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVL 509
+ P+ VT A +L A + LA L+ G++ H ++LR + + N+++DMY KCG L
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305
Query: 510 VLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDMR-QAGIEPDEVSFISVLYA 568
AR LFD +P + ISW M+ GY HG G + + F MR + ++PD V+ ++VL
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365
Query: 569 CSHSGLVDEGWRFFN-MMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDA 627
CSH + D G F+ M+ E +P EHY C+VD+L R G + EA+ FI+ MP P A
Sbjct: 366 CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 425
Query: 628 TIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKI 687
+ GSLL CR+H V + E V + E+EP+N G YV+L+N+YA A +W +V +R +
Sbjct: 426 GVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMM 485
Query: 688 SRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYAL 747
++ + K PG SWI+ + ++ F A +HP +++ + +K + ++MK+ GY P L
Sbjct: 486 MQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVL 545
Query: 748 INADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARRE 807
+ DE +KE L GHSEKLA+ FG++ G IRV KNLR+C DCH AK SK RE
Sbjct: 546 YDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFERE 605
Query: 808 IVLRDSNRFHHFKDGRCSCRGFW 830
+ LRD NRFH DG CSC +W
Sbjct: 606 VSLRDKNRFHQIVDGICSCGDYW 628
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 166/320 (51%), Gaps = 14/320 (4%)
Query: 217 VKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSG 276
++DA K+ DE+ +++VVSW MIS Y G + + L VF EM+ + T TVL+
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 277 CANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSW 336
C L G+ +H +K + I ++LLDMY+K G + A +FE + ER VVS
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSC 222
Query: 337 TSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKE 396
T++IAGYA+ G+ + A+ +F + EG+ P+ S+L A + LL+ GK H ++
Sbjct: 223 TAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR 282
Query: 397 NDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMI----------GALDL 446
++ + N+L+DMY+KCG+++ A +F+ MP + +SWN M+ L+L
Sbjct: 283 RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL 342
Query: 447 FVAML--QNFEPDGVTMACILPACASLAALERGREIHGYIL--RHGISADRNVANAIVDM 502
F M + +PD VT+ +L C+ + G I ++ +G IVDM
Sbjct: 343 FRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDM 402
Query: 503 YVKCGVLVLARSLFDMIPAK 522
+ G + A +P+K
Sbjct: 403 LGRAGRIDEAFEFIKRMPSK 422
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 206/429 (48%), Gaps = 42/429 (9%)
Query: 55 ISKTLVCKTKNYNAE----IGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLK 110
I ++ NY + I + C G L++A+ + + ++ Y ++L C D +
Sbjct: 8 IHRSFSSSPTNYVLQTILPISQLCSNGRLQEAL-LEMAMLGPEMGFHGYDALLNACLDKR 66
Query: 111 SLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLM 170
+L DG++VH+ + ++ + L ++L+ + C L++ R+V +++ V W ++
Sbjct: 67 ALRDGQRVHAHMIKTR-YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 125
Query: 171 HEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVL-KCLAVVG----------------- 212
YS+TG+ E+L +F +M + +TF+ VL C+ G
Sbjct: 126 SRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185
Query: 213 --------------NSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEM 258
+ ++K+A ++F+ L +RDVVS +I+GY G+ E+ LE+F +
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Query: 259 LNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDL 318
+ G + + T ++L+ + L G+ H L+ N+L+DMYSKCG+L
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305
Query: 319 DGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREG-IEPDVYAITSILHA 377
A R+F+ M ER+ +SW +M+ GY++ G+ + LFR M E ++PD + ++L
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365
Query: 378 CACDGLLEIGKDVHDYI--KENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIV 435
C+ + + G ++ D + E + ++DM + G + +A +MP K
Sbjct: 366 CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 425
Query: 436 S-WNTMIGA 443
+++GA
Sbjct: 426 GVLGSLLGA 434
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330
OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/538 (39%), Positives = 323/538 (60%), Gaps = 15/538 (2%)
Query: 308 LLDMYSKCGDLDGAIRVFEKMGERSVVS---WTSMIAGYAREGVFDGAIRLFRGMVREGI 364
L+ ++S C LD A ++F+ + + S+++ W +M GY+R G A+ ++ M+ I
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 365 EPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAES 424
EP ++I+ L AC L +G+ +H I + + V N L+ +Y + G DA
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 425 VFNQMPVKDIVSWNTMIGAL----------DLFVAMLQNFEP-DGVTMACILPACASLAA 473
VF+ M +++V+WN++I L +LF M + T+ ILPAC+ +AA
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA 352
Query: 474 LERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAG 533
L G+EIH IL+ D + N+++DMY KCG + +R +FD++ KDL SW IM+
Sbjct: 353 LLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 412
Query: 534 YGMHGFGCDAIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGWRFFNMMRYECNIEP 593
Y ++G + I F M ++G+ PD ++F+++L CS +GL + G F M+ E + P
Sbjct: 413 YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 472
Query: 594 KLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHEVKLAEKVAEHV 653
LEHYAC+VD+L R G + EA + IE MP P A+IWGSLL CR+H V + E A+ +
Sbjct: 473 ALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKEL 532
Query: 654 FELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIEIKGKVNIFVAG 713
F LEP N G YV+++N+YA+A+ W+ V K+RE + +RG+KK GCSW+++K K+ IFVAG
Sbjct: 533 FVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Query: 714 GS-SHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADEMEKEVALCGHSEKLAMAFGI 772
G ++ + + + L+ +++ GY P T L + DE K +CGHSE+LA + +
Sbjct: 593 GGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSL 652
Query: 773 LNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSNRFHHFKDGRCSCRGFW 830
++ G IR+TKNLRVC DCH K +S+ RR IVLRD+ RFHHF DG CSC+ +W
Sbjct: 653 IHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 180/387 (46%), Gaps = 37/387 (9%)
Query: 97 KTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFN 156
+ Y +L C KSL G K+ S+I + + + L SKL+ +F C L R++F+
Sbjct: 132 EAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFD 191
Query: 157 KIDNGKVF---IWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKC------ 207
+ + + +W + YS+ G+ +++L ++ M I +++ S LK
Sbjct: 192 DVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKD 251
Query: 208 --------------------------LAVVGNSRRVKDAHKLFDELSDRDVVSWNCMISG 241
L + S DA K+FD +S+R+VV+WN +IS
Sbjct: 252 LRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISV 311
Query: 242 YIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKE 301
+ +F++M AT+ T+L C+ AL+ G+ +HA LK+ +
Sbjct: 312 LSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 302 ISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVR 361
+ N+L+DMY KCG+++ + RVF+ M + + SW M+ YA G + I LF M+
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431
Query: 362 EGIEPDVYAITSILHACACDGLLEIGKDVHDYIK-ENDMQSSLYVSNALMDMYAKCGSMA 420
G+ PD ++L C+ GL E G + + +K E + +L L+D+ + G +
Sbjct: 432 SGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIK 491
Query: 421 DAESVFNQMPVKDIVS-WNTMIGALDL 446
+A V MP K S W +++ + L
Sbjct: 492 EAVKVIETMPFKPSASIWGSLLNSCRL 518
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 136/313 (43%), Gaps = 38/313 (12%)
Query: 103 LQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGK 162
L+ C DLK L G+ +H+ I + +D V+ + L+ +++ G + R+VF+ +
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQ-VVYNVLLKLYMESGLFDDARKVFDGMSERN 301
Query: 163 VFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVV----------- 211
V WN L+ SK E LF+KMQ I T + +L + V
Sbjct: 302 VVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHA 361
Query: 212 ---------------------GNSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEK 250
G V+ + ++FD + +D+ SWN M++ Y NG E+
Sbjct: 362 QILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEE 421
Query: 251 GLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKACF--SKEISFNNTL 308
+ +F+ M+ G D T V +LSGC++ G +G ++ +K F S + L
Sbjct: 422 VINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFE-RMKTEFRVSPALEHYACL 480
Query: 309 LDMYSKCGDLDGAIRVFEKMGERSVVS-WTSMIAGYAREG-VFDGAIRLFRGMVREGIEP 366
+D+ + G + A++V E M + S W S++ G V G I V E P
Sbjct: 481 VDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNP 540
Query: 367 DVYAITSILHACA 379
Y + S ++A A
Sbjct: 541 GNYVMVSNIYADA 553
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 72 RFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDD 131
R E+ NL + M+ E T +IL C+ + +L GK++H+ I +S D
Sbjct: 317 RVHEMFNLFRKMQ----EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDV 372
Query: 132 GVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQS 191
+L S L+ M+ CG+++ RRVF+ + + WN++++ Y+ GN +E + LF+ M
Sbjct: 373 PLLNS-LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431
Query: 192 LGIAADSYTFSCVL 205
G+A D TF +L
Sbjct: 432 SGVAPDGITFVALL 445
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/635 (35%), Positives = 353/635 (55%), Gaps = 47/635 (7%)
Query: 150 EGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCVLKCLA 209
+ R++F ++ ++ WN L+ S+ ++E LY F M D++T LK
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 210 -------------------------VVGNSR--------RVKDAHKLFDELSDRDVVSWN 236
VG+S R+ +A ++FDEL D+V+W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 237 CMISGYIANGVAEKGLEVFKEMLNLG-FNVDLATMVTVLSGCANCGALMFGRAVHAFALK 295
M+SG+ NG + +E F+ M+ D T++T++S C GR VH F ++
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 296 ACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRL 355
FS ++S N+LL+ Y+K A+ +F+ + E+ V+SW+++IA Y + G A+ +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 356 FRGMVREGIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAK 415
F M+ +G EP+V + +L ACA LE G+ H+ +++ + VS AL+DMY K
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 416 CGSMADAESVFNQMPVKDIVSWNTMIGALDL----------FVAML--QNFEPDGVTMAC 463
C S +A +VF+++P KD+VSW +I L F ML N PD + M
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371
Query: 464 ILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKD 523
+L +C+ L LE+ + H Y++++G ++ + ++V++Y +CG L A +F+ I KD
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKD 431
Query: 524 LISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISVLYACSHSGLVDEGWRFF 582
+ WT +I GYG+HG G A+ TFN M + + ++P+EV+F+S+L ACSH+GL+ EG R F
Sbjct: 432 TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIF 491
Query: 583 NMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRIHHE 642
+M + + P LEHYA +VDLL R G+L A + MP +P I G+LL CRIH
Sbjct: 492 KLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQN 551
Query: 643 VKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLREKISRRGLKKNPGCSWIE 702
++AE VA+ +FELE ++ GYY+L++NVY +WE V+KLR + +RG+KK S IE
Sbjct: 552 GEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIE 611
Query: 703 IKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKRE 737
I+ KV+ FVA HP + + LLK L L MK +
Sbjct: 612 IRRKVHRFVADDELHPEKEPVYGLLKELDLHMKED 646
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 237/489 (48%), Gaps = 52/489 (10%)
Query: 84 EVLYS-----SEKSKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKL 138
EVLY ++ K D T L+ C +L+ + G+ +H + + + D +GS L
Sbjct: 43 EVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSL 102
Query: 139 VFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAAD 197
++M++ CG + E R+F++++ + W+ ++ + K G+ +++ F++M + + D
Sbjct: 103 IYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPD 162
Query: 198 SYT--------------------------------FSCVLKCLAVVGNSRRVKDAHKLFD 225
T S V L SR K+A LF
Sbjct: 163 RVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK 222
Query: 226 ELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMF 285
++++DV+SW+ +I+ Y+ NG A + L VF +M++ G ++AT++ VL CA L
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 286 GRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAR 345
GR H A++ E+ + L+DMY KC + A VF ++ + VVSW ++I+G+
Sbjct: 283 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342
Query: 346 EGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLY 404
G+ +I F M+ E PD + +L +C+ G LE K H Y+ + S+ +
Sbjct: 343 NGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPF 402
Query: 405 VSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIG----------ALDLFVAMLQNF 454
+ +L+++Y++CGS+ +A VFN + +KD V W ++I AL+ F M+++
Sbjct: 403 IGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSS 462
Query: 455 E--PDGVTMACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVL 511
E P+ VT IL AC+ + G I ++ + ++ + +VD+ + G L
Sbjct: 463 EVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDT 522
Query: 512 ARSLFDMIP 520
A + +P
Sbjct: 523 AIEITKRMP 531
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 303,992,789
Number of Sequences: 539616
Number of extensions: 12766179
Number of successful extensions: 40529
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 30589
Number of HSP's gapped (non-prelim): 2643
length of query: 830
length of database: 191,569,459
effective HSP length: 126
effective length of query: 704
effective length of database: 123,577,843
effective search space: 86998801472
effective search space used: 86998801472
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)