Your job contains 1 sequence.
>047411
MDADLCAILYFLYLISTASIRINADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKS
PTMVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDS
LQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHV
TVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNGT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047411
(226 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2016314 - symbol:AT1G80170 species:3702 "Arabi... 370 4.4e-36 2
TAIR|locus:2128023 - symbol:AT4G35670 species:3702 "Arabi... 364 2.0e-33 1
TAIR|locus:2155292 - symbol:AT5G44840 species:3702 "Arabi... 261 2.4e-33 2
TAIR|locus:2146370 - symbol:AT5G27530 species:3702 "Arabi... 273 7.7e-33 2
TAIR|locus:2103478 - symbol:ADPG1 species:3702 "Arabidops... 346 1.6e-31 1
TAIR|locus:2077407 - symbol:QRT2 "QUARTET 2" species:3702... 339 8.8e-31 1
TAIR|locus:2027534 - symbol:AT1G56710 species:3702 "Arabi... 336 1.8e-30 1
TAIR|locus:2026795 - symbol:AT1G70500 species:3702 "Arabi... 336 1.8e-30 1
TAIR|locus:2196055 - symbol:AT1G02460 species:3702 "Arabi... 334 3.4e-30 1
TAIR|locus:2093212 - symbol:AT3G15720 species:3702 "Arabi... 331 6.2e-30 1
TAIR|locus:2054396 - symbol:PGAZAT "polygalacturonase abs... 328 1.3e-29 1
TAIR|locus:2028844 - symbol:AT1G23460 species:3702 "Arabi... 327 1.6e-29 1
TAIR|locus:2141345 - symbol:AT4G01890 species:3702 "Arabi... 323 4.4e-29 1
TAIR|locus:2023817 - symbol:AT1G48100 species:3702 "Arabi... 320 1.1e-28 1
TAIR|locus:2167185 - symbol:AT5G17200 species:3702 "Arabi... 314 3.9e-28 1
TAIR|locus:2178052 - symbol:AT5G39910 species:3702 "Arabi... 230 1.1e-27 2
TAIR|locus:2127821 - symbol:AT4G32370 species:3702 "Arabi... 308 1.7e-27 1
TAIR|locus:2222657 - symbol:AT5G14650 species:3702 "Arabi... 303 5.7e-27 1
TAIR|locus:2156314 - symbol:AT5G44830 species:3702 "Arabi... 200 1.1e-26 2
TAIR|locus:2043924 - symbol:AT2G43870 species:3702 "Arabi... 300 1.2e-26 1
UNIPROTKB|Q6H9K0 - symbol:plaa2 "Exopolygalacturonase" sp... 293 6.6e-26 1
TAIR|locus:2119485 - symbol:AT4G13760 species:3702 "Arabi... 291 1.1e-25 1
TAIR|locus:2030791 - symbol:AT1G43090 species:3702 "Arabi... 292 1.2e-25 1
TAIR|locus:2030797 - symbol:AT1G43080 species:3702 "Arabi... 288 2.2e-25 1
TAIR|locus:2080422 - symbol:AT3G59850 species:3702 "Arabi... 287 2.9e-25 1
TAIR|locus:2031963 - symbol:AT1G05660 species:3702 "Arabi... 282 9.7e-25 1
TAIR|locus:2016239 - symbol:AT1G80140 species:3702 "Arabi... 281 1.2e-24 1
TAIR|locus:2047223 - symbol:AT2G15450 species:3702 "Arabi... 280 1.6e-24 1
TAIR|locus:2047218 - symbol:AT2G15460 species:3702 "Arabi... 280 1.6e-24 1
TAIR|locus:2088842 - symbol:AT3G26610 species:3702 "Arabi... 281 3.3e-24 1
TAIR|locus:2031953 - symbol:AT1G05650 species:3702 "Arabi... 274 6.8e-24 1
TAIR|locus:2066251 - symbol:AT2G26620 species:3702 "Arabi... 274 6.8e-24 1
TAIR|locus:2043894 - symbol:AT2G43880 species:3702 "Arabi... 273 8.7e-24 1
TAIR|locus:2030803 - symbol:AT1G43100 species:3702 "Arabi... 273 1.9e-23 1
TAIR|locus:2047153 - symbol:AT2G15470 species:3702 "Arabi... 270 2.1e-23 1
TAIR|locus:2063114 - symbol:AT2G40310 species:3702 "Arabi... 269 2.7e-23 1
TAIR|locus:2046555 - symbol:AT2G33160 species:3702 "Arabi... 276 3.6e-23 1
TAIR|locus:2032125 - symbol:AT1G78400 species:3702 "Arabi... 264 1.1e-22 1
TAIR|locus:504955462 - symbol:AT4G32375 species:3702 "Ara... 267 1.4e-22 1
TAIR|locus:2020352 - symbol:AT1G17150 species:3702 "Arabi... 262 1.8e-22 1
TAIR|locus:2164773 - symbol:AT5G48140 species:3702 "Arabi... 258 4.6e-22 1
TAIR|locus:2141877 - symbol:AT4G18180 species:3702 "Arabi... 259 4.9e-22 1
TAIR|locus:2024680 - symbol:PGA4 "polygalacturonase 4" sp... 259 5.6e-22 1
TAIR|locus:2077412 - symbol:AT3G07830 species:3702 "Arabi... 255 1.1e-21 1
TAIR|locus:2077402 - symbol:AT3G07820 species:3702 "Arabi... 253 1.6e-21 1
TAIR|locus:2043974 - symbol:AT2G43860 species:3702 "Arabi... 246 1.3e-20 1
TAIR|locus:2051764 - symbol:AT2G43890 species:3702 "Arabi... 244 1.9e-20 1
TAIR|locus:2034131 - symbol:AT1G65570 species:3702 "Arabi... 243 2.6e-20 1
TAIR|locus:2077437 - symbol:AT3G07840 species:3702 "Arabi... 243 2.8e-20 1
TAIR|locus:2036581 - symbol:AT1G60590 species:3702 "Arabi... 210 5.9e-19 2
TAIR|locus:2019963 - symbol:AT1G10640 species:3702 "Arabi... 198 2.9e-17 2
TAIR|locus:2077442 - symbol:AT3G07850 species:3702 "Arabi... 215 5.5e-17 1
TAIR|locus:2088252 - symbol:AT3G14040 species:3702 "Arabi... 213 9.3e-17 1
TAIR|locus:2127836 - symbol:AT4G32380 species:3702 "Arabi... 160 3.4e-11 1
TAIR|locus:2152980 - symbol:AT5G41870 species:3702 "Arabi... 128 5.0e-06 1
TAIR|locus:2128524 - symbol:AT4G23820 species:3702 "Arabi... 126 8.9e-06 1
TAIR|locus:2101313 - symbol:AT3G48950 species:3702 "Arabi... 115 0.00022 1
TAIR|locus:2098038 - symbol:AT3G62110 species:3702 "Arabi... 115 0.00022 1
TAIR|locus:2119156 - symbol:AT4G33440 species:3702 "Arabi... 115 0.00022 1
TAIR|locus:2117964 - symbol:AT4G23500 species:3702 "Arabi... 113 0.00040 1
>TAIR|locus:2016314 [details] [associations]
symbol:AT1G80170 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009505 "plant-type cell wall" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC009322 EMBL:AY046002
EMBL:AY142668 IPI:IPI00518842 PIR:D96833 RefSeq:NP_565232.1
UniGene:At.11620 ProteinModelPortal:Q94AJ5 SMR:Q94AJ5 IntAct:Q94AJ5
STRING:Q94AJ5 EnsemblPlants:AT1G80170.1 GeneID:844357
KEGG:ath:AT1G80170 GeneFarm:519 TAIR:At1g80170 InParanoid:Q94AJ5
OMA:KWLYFHG PhylomeDB:Q94AJ5 ProtClustDB:PLN02793
Genevestigator:Q94AJ5 Uniprot:Q94AJ5
Length = 444
Score = 370 (135.3 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 70/181 (38%), Positives = 101/181 (55%)
Query: 45 AFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEW 104
AF AW CS+ K+ +++P+ T L+ PI +GPCK+ +T+ +SG+IIAPN P+ W
Sbjct: 71 AFADAWKTACSSKVKT-RILVPENYTCLLRPIDLSGPCKAR-LTLQISGTIIAPNDPDVW 128
Query: 105 KEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXX 164
+ ++ KW + L ++G GT++G G+ WW+ SCK N C + APT L F +C
Sbjct: 129 EGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKHNHSNPC-RGAPTALTFHKCKN 187
Query: 165 XXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISN 224
S Q H+ + C V L + AP TSPNTDGIHI S + I N +S
Sbjct: 188 MRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVST 247
Query: 225 G 225
G
Sbjct: 248 G 248
Score = 35 (17.4 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 5 LCAILYFLYLISTASIRINADEFNVL 30
L +L L + S+ ++ NA+ F L
Sbjct: 9 LVTLLLLLVVASSLALTANANSFESL 34
>TAIR|locus:2128023 [details] [associations]
symbol:AT4G35670 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002687 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00518919 RefSeq:NP_195292.2
UniGene:At.54617 ProteinModelPortal:F4JN47 SMR:F4JN47
EnsemblPlants:AT4G35670.1 GeneID:829719 KEGG:ath:AT4G35670
OMA:DSTNINI Uniprot:F4JN47
Length = 394
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 72/199 (36%), Positives = 105/199 (52%)
Query: 27 FNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSD 86
+NVL+F S AF++AW C T++IP GKTFL+ P F GPCKSS
Sbjct: 24 YNVLNFDAKGDGQTDDSEAFLQAWTAACGGDGDIKTLLIPSGKTFLLQPTVFQGPCKSSS 83
Query: 87 ITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKK 146
I + L G+I+AP+ W + W +V L I GSGTID RG ++W+++ K +++
Sbjct: 84 IKVQLDGTIVAPSDKFAWSDPISRMWIKFSTVSGLIIVGSGTIDSRGSSFWELNLKASQR 143
Query: 147 EGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDG 206
PT L +C SP+ H+++ C V +++ AP TSPNTDG
Sbjct: 144 -------PTALHISKCDNLRINGITSIDSPKNHISIKTCNTVAISNINLFAPETSPNTDG 196
Query: 207 IHIQASSNVYIHNAHISNG 225
I I S+N+ I ++ I G
Sbjct: 197 IDISDSTNINIFDSTIQTG 215
>TAIR|locus:2155292 [details] [associations]
symbol:AT5G44840 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB010693
EMBL:AC002342 IPI:IPI00532756 RefSeq:NP_199297.1 UniGene:At.55366
ProteinModelPortal:O48576 SMR:O48576 STRING:O48576
EnsemblPlants:AT5G44840.1 GeneID:834514 KEGG:ath:AT5G44840
TAIR:At5g44840 InParanoid:O48576 OMA:NANEANG PhylomeDB:O48576
ProtClustDB:CLSN2687281 Genevestigator:O48576 Uniprot:O48576
Length = 381
Score = 261 (96.9 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 48/131 (36%), Positives = 73/131 (55%)
Query: 8 ILYFLYLISTA-SIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIP 66
IL ++L++ SI +N ++VL+F S AF+KAW+ C + S T +IP
Sbjct: 4 ILRGVFLLTLLHSILVNGQIYDVLEFGADGNGITDDSKAFVKAWSAMCGSGGNSKTFIIP 63
Query: 67 KGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGS 126
KTFL+ P+TF GPCKS + + G I+AP W + +W + + L ++GS
Sbjct: 64 SNKTFLLQPLTFQGPCKSPSVQVKFDGKIVAPINKAAWSDYKLFRWVSFKEIIGLTVNGS 123
Query: 127 GTIDGRGKAWW 137
GTI GRG ++W
Sbjct: 124 GTIHGRGSSFW 134
Score = 118 (46.6 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 157 LKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVY 216
L F RC SP+ H+++ C V+ + + AP SPNTDGI+I SS+V
Sbjct: 137 LHFQRCNDLMITGITSFNSPKNHISISECKRVKITKIKLVAPHDSPNTDGINISESSDVD 196
Query: 217 IHNAHISNG 225
I++ I G
Sbjct: 197 IYDTVIGTG 205
>TAIR|locus:2146370 [details] [associations]
symbol:AT5G27530 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00518530 RefSeq:NP_198105.2 UniGene:At.55039
ProteinModelPortal:F4K4C2 EnsemblPlants:AT5G27530.1 GeneID:832813
KEGG:ath:AT5G27530 OMA:CKSTSIK PhylomeDB:F4K4C2 Uniprot:F4K4C2
Length = 458
Score = 273 (101.2 bits), Expect = 7.7e-33, Sum P(2) = 7.7e-33
Identities = 49/117 (41%), Positives = 64/117 (54%)
Query: 22 INADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGP 81
+N +NVL F S AF++AWN TC T+ IP GKT+L+ PI F GP
Sbjct: 48 VNGQIYNVLKFGAEGDGQTDDSNAFLQAWNATCGGEENINTLFIPSGKTYLLQPIEFKGP 107
Query: 82 CKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWD 138
CKS+ I + L G I+AP+ W W V L IDGSGTI+GRG ++W+
Sbjct: 108 CKSTSIKLQLDGIIVAPSNITSWSNPKSQTWISFSGVPGLMIDGSGTINGRGSSFWE 164
Score = 109 (43.4 bits), Expect = 7.7e-33, Sum P(2) = 7.7e-33
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 175 SPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
SP++H+++ C V ++I AP SPNTDGI I S+NV I ++ I G
Sbjct: 184 SPKSHISIKNCHYVAISKINILAPENSPNTDGIDISYSTNVNIFDSTIQTG 234
>TAIR|locus:2103478 [details] [associations]
symbol:ADPG1 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS;IDA]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009830
"cell wall modification involved in abscission" evidence=RCA;TAS]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0010047 "fruit
dehiscence" evidence=IMP] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
GO:GO:0005737 GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005576 GO:GO:0005975 EMBL:AF037367 EMBL:AJ002532
EMBL:AL133248 EMBL:AK117942 EMBL:BT005376 IPI:IPI00526588
PIR:T46187 RefSeq:NP_191310.1 UniGene:At.26895
ProteinModelPortal:O23147 SMR:O23147 STRING:O23147 CAZy:GH28
PaxDb:O23147 PRIDE:O23147 EnsemblPlants:AT3G57510.1 GeneID:824918
KEGG:ath:AT3G57510 GeneFarm:24 TAIR:At3g57510 eggNOG:COG5434
HOGENOM:HOG000237792 InParanoid:O23147 KO:K01184 OMA:KNVVYKN
PhylomeDB:O23147 ProtClustDB:PLN02218 Genevestigator:O23147
GO:GO:0004650 GO:GO:0009901 GO:GO:0009830 GO:GO:0010047
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 Uniprot:O23147
Length = 431
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 77/216 (35%), Positives = 111/216 (51%)
Query: 12 LYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTF 71
L LIS+ + A +V +F + AF KAW CS + T ++PKGKT+
Sbjct: 53 LSLISSDETTLEASTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVT-TFLVPKGKTY 111
Query: 72 LVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDG--SGTI 129
L+ F GPCKS + G++ A +++K DK+ W ++ V++L IDG +G I
Sbjct: 112 LLKSTRFRGPCKSLR-NFQILGTLSASTKRSDYK--DKNHWLILEDVNNLSIDGGSTGII 168
Query: 130 DGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVE 189
+G GK WW SCKI+K + C K APT L + Q +++ C VE
Sbjct: 169 NGNGKTWWQNSCKIDKSKPCTK-APTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVE 227
Query: 190 FGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
+ I APG SPNTDGIHI + N+ + N+ I G
Sbjct: 228 VSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTG 263
>TAIR|locus:2077407 [details] [associations]
symbol:QRT2 "QUARTET 2" species:3702 "Arabidopsis
thaliana" [GO:0004650 "polygalacturonase activity"
evidence=IEA;ISS;IDA] [GO:0005576 "extracellular region"
evidence=ISM] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA;ISS] [GO:0009830 "cell wall modification involved in
abscission" evidence=TAS] [GO:0009901 "anther dehiscence"
evidence=IMP] [GO:0010047 "fruit dehiscence" evidence=IMP]
[GO:0048235 "pollen sperm cell differentiation" evidence=IMP]
[GO:0045490 "pectin catabolic process" evidence=IMP]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0045490
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
GO:GO:0009901 GO:GO:0009830 GO:GO:0010047 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483 GO:GO:0048235
IPI:IPI00516594 RefSeq:NP_187454.2 UniGene:At.40276
ProteinModelPortal:Q9SFB7 SMR:Q9SFB7 STRING:Q9SFB7
EnsemblPlants:AT3G07970.1 GeneID:819988 KEGG:ath:AT3G07970
TAIR:At3g07970 InParanoid:Q9SFB7 OMA:NIRLENA PhylomeDB:Q9SFB7
ProtClustDB:CLSN2690525 Genevestigator:Q9SFB7 Uniprot:Q9SFB7
Length = 439
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 72/205 (35%), Positives = 108/205 (52%)
Query: 21 RINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTG 80
R + FNV F S AF+KAW CS+T +V PK + +++ +TF+G
Sbjct: 65 RSSPRSFNVNTFGAKANGNDD-SKAFMKAWEAACSSTG-IVYIVAPKNRDYMLKAVTFSG 122
Query: 81 PCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDIS 140
PCKSS I + G I A P+++KE + W ++V++L+++G G IDG G WW S
Sbjct: 123 PCKSSLIIFKIYGRIEAWENPSDYKE--RRHWIVFENVNNLRVEGGGRIDGNGHIWWPKS 180
Query: 141 CKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGT 200
CKIN + C+ APT + F C + Q H+T C V+ L + +P
Sbjct: 181 CKINPQLPCLG-APTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPAD 239
Query: 201 SPNTDGIHIQASSNVYIHNAHISNG 225
SPNTDGIH+ + N+ I ++ + G
Sbjct: 240 SPNTDGIHVSGTQNILIQDSIVRTG 264
>TAIR|locus:2027534 [details] [associations]
symbol:AT1G56710 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
EMBL:AC009323 IPI:IPI00545331 PIR:A96609 RefSeq:NP_176064.1
UniGene:At.49984 ProteinModelPortal:Q9FXC1 SMR:Q9FXC1 PaxDb:Q9FXC1
PRIDE:Q9FXC1 EnsemblPlants:AT1G56710.1 GeneID:842127
KEGG:ath:AT1G56710 TAIR:At1g56710 InParanoid:Q9FXC1 OMA:CDSPVAI
PhylomeDB:Q9FXC1 ProtClustDB:CLSN2912808 Genevestigator:Q9FXC1
Uniprot:Q9FXC1
Length = 434
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 71/205 (34%), Positives = 107/205 (52%)
Query: 27 FNVLDFXXXXXXXXXXSMAFIKAWNNTCSATA-KSPTMVIPKGKTFLVHPITFTGPCKSS 85
F+V F + AF AW+ C +T KS +++P FLV P TF GPC+++
Sbjct: 48 FDVTSFGAIGDCSTDDTSAFKMAWDAACMSTGPKSALLLVPYTFCFLVKPTTFNGPCRTN 107
Query: 86 DITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINK 145
+ + + G I++P+GP W + + +W V+ L I GSG I+GRG+ WW++ CK +K
Sbjct: 108 -LVLQIDGFIVSPDGPRSWPSNYQRQWMMFYRVNGLSIQGSGVINGRGQKWWNLPCKPHK 166
Query: 146 K-EGCVKL----APTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGT 200
G + +P ++ + S Q HV C V + I+AP +
Sbjct: 167 GLNGTTQTGPCDSPVAIRLFQSSKVRIQGINFMNSAQFHVRFDNCSDVVVDSVIIKAPAS 226
Query: 201 SPNTDGIHIQASSNVYIHNAHISNG 225
SPNTDGIHI+ + NV I N+ ISNG
Sbjct: 227 SPNTDGIHIENTHNVQIRNSMISNG 251
>TAIR|locus:2026795 [details] [associations]
symbol:AT1G70500 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005576 GO:GO:0005975 EMBL:AC010796 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 IPI:IPI00520664
PIR:H96728 RefSeq:NP_177207.1 UniGene:At.52467
ProteinModelPortal:Q9CAL5 SMR:Q9CAL5 PRIDE:Q9CAL5
EnsemblPlants:AT1G70500.1 GeneID:843386 KEGG:ath:AT1G70500
TAIR:At1g70500 InParanoid:Q9CAL5 OMA:TIQSCRI PhylomeDB:Q9CAL5
ProtClustDB:CLSN2682788 Genevestigator:Q9CAL5 Uniprot:Q9CAL5
Length = 468
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 68/198 (34%), Positives = 99/198 (50%)
Query: 28 NVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDI 87
NV F + AFI+AW CSA + +++P+G+++LV+ F GPC+ +
Sbjct: 68 NVDSFNASGDGVSDDTQAFIRAWTMACSAP--NSVLLVPQGRSYLVNATKFDGPCQEK-L 124
Query: 88 TIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKE 147
I + G+IIAP+ P++W W + + G+G IDG G WW SCK NK
Sbjct: 125 IIQIDGTIIAPDEPSQWDPKFPRNWLQFSKLQGVVFQGNGVIDGSGTKWWAASCKKNKSN 184
Query: 148 GCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGI 207
CV APT L S Q H+ + V + + +PG SPNTDGI
Sbjct: 185 PCVG-APTALTIYSSSNVYVRGLTIRNSQQMHLIIQRSTTVRISRVMVTSPGDSPNTDGI 243
Query: 208 HIQASSNVYIHNAHISNG 225
HI AS++V + ++ IS G
Sbjct: 244 HITASTDVVVQDSKISTG 261
>TAIR|locus:2196055 [details] [associations]
symbol:AT1G02460 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 EMBL:AC022521
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
HSSP:O74213 EMBL:BT023462 IPI:IPI00548187 PIR:B86155
RefSeq:NP_563654.1 UniGene:At.49842 ProteinModelPortal:Q9FWX5
SMR:Q9FWX5 EnsemblPlants:AT1G02460.1 GeneID:839443
KEGG:ath:AT1G02460 TAIR:At1g02460 InParanoid:Q9FWX5 OMA:CVSIGSG
PhylomeDB:Q9FWX5 ProtClustDB:CLSN2687622 Genevestigator:Q9FWX5
Uniprot:Q9FWX5
Length = 491
Score = 334 (122.6 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 72/207 (34%), Positives = 107/207 (51%)
Query: 27 FNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPT-MVIPKGKTFLVHPITFTGPCKSS 85
+NV + + AF AW+++C+ + + +++P G TF++ FTGPC+S
Sbjct: 89 YNVRKYGAVGDGETDDTEAFKTAWDSSCNNENNTDSVLLVPYGYTFMIQSTIFTGPCRSY 148
Query: 86 DITIMLSGSIIAPNGPNEWKED-DKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKIN 144
+ G+I+ P+GP W + K +W V+ + + G G IDGRG+ WWD+ CK +
Sbjct: 149 QF-FQVDGTIVTPDGPESWPSNISKRQWLVFYRVNGMALKGEGVIDGRGQKWWDLPCKPH 207
Query: 145 K---KEGCVKL---APTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAP 198
+ K V +P L+F SPQ H GC GV L I AP
Sbjct: 208 RSVNKSAIVTGPCDSPIALRFFMSSNLRVEGLQIKNSPQFHFRFDGCQGVHVESLHITAP 267
Query: 199 GTSPNTDGIHIQASSNVYIHNAHISNG 225
SPNTDGIHI+ S++V I+N+ ISNG
Sbjct: 268 PLSPNTDGIHIENSNSVTIYNSIISNG 294
>TAIR|locus:2093212 [details] [associations]
symbol:AT3G15720 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0031225
"anchored to membrane" evidence=TAS] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975
GO:GO:0009505 CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792
KO:K01184 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB017071 GO:GO:0046658 IPI:IPI00519614 RefSeq:NP_566524.1
UniGene:At.39003 HSSP:O74213 ProteinModelPortal:Q9LW07 SMR:Q9LW07
STRING:Q9LW07 EnsemblPlants:AT3G15720.1 GeneID:820815
KEGG:ath:AT3G15720 GeneFarm:340 TAIR:At3g15720 InParanoid:Q9LW07
OMA:SLRINAP PhylomeDB:Q9LW07 ProtClustDB:PLN03003
Genevestigator:Q9LW07 GermOnline:AT3G15720 Uniprot:Q9LW07
Length = 456
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 74/217 (34%), Positives = 108/217 (49%)
Query: 10 YFL-YLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKG 68
+FL + + I +++ +V F S AF+KAW CS T V+P G
Sbjct: 6 WFLNFSLFFLQIFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGDGQ-FVVPAG 64
Query: 69 KTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGT 128
TF++ P+ F G CKS+ + + + G ++AP+ N WK DK +W ++ L I+G G
Sbjct: 65 MTFMLQPLKFQGSCKSTPVFVQMLGKLVAPSKGN-WK-GDKDQWILFTDIEGLVIEGDGE 122
Query: 129 IDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGV 188
I+G+G +WW+ +G PT LKF C SP H+ + C V
Sbjct: 123 INGQGSSWWE-------HKGS---RPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYV 172
Query: 189 EFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
L I AP +SPNTDGI + ASSNV I + I+ G
Sbjct: 173 TISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATG 209
>TAIR|locus:2054396 [details] [associations]
symbol:PGAZAT "polygalacturonase abscission zone A.
thaliana" species:3702 "Arabidopsis thaliana" [GO:0004650
"polygalacturonase activity" evidence=IEA;ISS;IDA] [GO:0005576
"extracellular region" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA;ISS] [GO:0009830 "cell wall
modification involved in abscission" evidence=RCA;TAS] [GO:0009901
"anther dehiscence" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010227 "floral organ abscission" evidence=IMP]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975
EMBL:AC002339 CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792
ProtClustDB:PLN02218 GO:GO:0004650 GO:GO:0009901 GO:GO:0009830
GO:GO:0010047 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AY078936 EMBL:AF083793 IPI:IPI00518873 PIR:H84846
RefSeq:NP_850359.1 UniGene:At.42781 ProteinModelPortal:Q8RY29
SMR:Q8RY29 STRING:Q8RY29 EnsemblPlants:AT2G41850.1 GeneID:818785
KEGG:ath:AT2G41850 GeneFarm:30 TAIR:At2g41850 InParanoid:Q8RY29
OMA:QINDITC PhylomeDB:Q8RY29 Genevestigator:Q8RY29 GO:GO:0010227
Uniprot:Q8RY29
Length = 433
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 70/210 (33%), Positives = 107/210 (50%)
Query: 18 ASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPIT 77
AS+R +V DF + AF+ AW CS+ + +++PKG T+L+ I
Sbjct: 60 ASLR-TPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNG-AVNLLVPKGNTYLLKSIQ 117
Query: 78 FTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDG--SGTIDGRGKA 135
TGPC S +T+ + G++ A +++K D SKW V++L +DG +G +DG G+
Sbjct: 118 LTGPCNSI-LTVQIFGTLSASQKRSDYK--DISKWIMFDGVNNLSVDGGDTGVVDGNGET 174
Query: 136 WWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSI 195
WW SCK NK + C K APT L F + Q +++ C V+ + +
Sbjct: 175 WWQNSCKRNKAKPCTK-APTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVV 233
Query: 196 QAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
AP SPNTDGIHI + N+ + + I G
Sbjct: 234 TAPADSPNTDGIHITNTQNIRVSESIIGTG 263
>TAIR|locus:2028844 [details] [associations]
symbol:AT1G23460 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00538330 RefSeq:NP_173760.2
UniGene:At.49907 ProteinModelPortal:F4I672 SMR:F4I672 PRIDE:F4I672
EnsemblPlants:AT1G23460.1 GeneID:838954 KEGG:ath:AT1G23460
OMA:HITESTN Uniprot:F4I672
Length = 460
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 66/198 (33%), Positives = 96/198 (48%)
Query: 28 NVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDI 87
NV F + AF+ AW+ CS T+KS ++P+G+ +LV+ F GPC+ +
Sbjct: 68 NVDTFGAAGDGVSDDTQAFVSAWSKACS-TSKS-VFLVPEGRRYLVNATKFNGPCEQK-L 124
Query: 88 TIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKE 147
I + G+I+AP+ P+ W + W + + + G G IDG G WW SCK NK
Sbjct: 125 IIQIDGTIVAPDEPSNWDSKFQRIWLEFSKLKGVVFQGKGVIDGSGSKWWAASCKKNKSN 184
Query: 148 GCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGI 207
C K APT L + S Q + + V + + +PG SPNTDGI
Sbjct: 185 PC-KSAPTALTIESSSGVKVSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTDGI 243
Query: 208 HIQASSNVYIHNAHISNG 225
HI S+NV + + I G
Sbjct: 244 HITGSTNVILQDCKIGTG 261
>TAIR|locus:2141345 [details] [associations]
symbol:AT4G01890 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00524879 RefSeq:NP_192098.2 UniGene:At.34358
ProteinModelPortal:F4JG70 SMR:F4JG70 EnsemblPlants:AT4G01890.1
GeneID:828220 KEGG:ath:AT4G01890 OMA:RINGMAL Uniprot:F4JG70
Length = 468
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 68/192 (35%), Positives = 103/192 (53%)
Query: 43 SMAFIKAWNNTCSATAKSPTMV--IPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNG 100
+++F AW++ CS + V +P G TF++ FTGPC+S + G+I+ +G
Sbjct: 81 TVSFKTAWDSACSNNKNNTASVLHVPYGFTFMIRSTIFTGPCRSYQY-FQVDGTIVPRDG 139
Query: 101 PNEWKED-DKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKE-GCVKLA----- 153
P W +K +W ++ + + G+G IDGRG+ WWD+ CK +++ KLA
Sbjct: 140 PKSWPSSLNKRQWLAFYRINGMALQGAGVIDGRGQNWWDLPCKPHQQNVNKTKLAGPCES 199
Query: 154 PTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASS 213
P L+F SPQ H+ + GC V L I +P SPNTDGIHI+ S+
Sbjct: 200 PAALRFFMSSNVIVKGLSIKNSPQVHLKLDGCHVVHINSLRIISPPASPNTDGIHIENSN 259
Query: 214 NVYIHNAHISNG 225
+V I+N+ ISNG
Sbjct: 260 SVEIYNSVISNG 271
>TAIR|locus:2023817 [details] [associations]
symbol:AT1G48100 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005618 GO:GO:0005576 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC023673
EMBL:AF410319 EMBL:AY050798 EMBL:AY096360 IPI:IPI00541837
PIR:C96521 RefSeq:NP_175244.1 UniGene:At.48286 UniGene:At.70184
ProteinModelPortal:Q949Z1 SMR:Q949Z1 EnsemblPlants:AT1G48100.1
GeneID:841228 KEGG:ath:AT1G48100 GeneFarm:478 TAIR:At1g48100
InParanoid:Q949Z1 OMA:QACVSNI PhylomeDB:Q949Z1
ProtClustDB:CLSN2682184 Genevestigator:Q949Z1 Uniprot:Q949Z1
Length = 475
Score = 320 (117.7 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 67/205 (32%), Positives = 104/205 (50%)
Query: 27 FNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSD 86
F+V F + AF AW C+ +S ++ P+G F + F+GPCK
Sbjct: 80 FDVTSFGAVGDGSCDDTAAFQDAWKAACAV--ESGVVLAPEGGVFKITSTIFSGPCKPG- 136
Query: 87 ITIMLSGSIIAPNGPNEWKE-DDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINK 145
+ L G ++ P+GP EW E D+K++W +D G GT++G G+ WWD+ CK ++
Sbjct: 137 LVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHR 196
Query: 146 -KEGCVK----LAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGT 200
+G +PT+++F SPQ H+ GC GV + I +P
Sbjct: 197 GPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKL 256
Query: 201 SPNTDGIHIQASSNVYIHNAHISNG 225
SPNTDGIH+ + +V I+N+ +SNG
Sbjct: 257 SPNTDGIHLGNTRSVGIYNSVVSNG 281
>TAIR|locus:2167185 [details] [associations]
symbol:AT5G17200 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 KO:K01184 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB005238
HSSP:P26214 IPI:IPI00532874 RefSeq:NP_197222.1 UniGene:At.54880
ProteinModelPortal:Q9FFI9 SMR:Q9FFI9 STRING:Q9FFI9
EnsemblPlants:AT5G17200.1 GeneID:831584 KEGG:ath:AT5G17200
TAIR:At5g17200 InParanoid:Q9FFI9 OMA:GSSHINI PhylomeDB:Q9FFI9
ProtClustDB:CLSN2914874 Genevestigator:Q9FFI9 Uniprot:Q9FFI9
Length = 421
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 66/198 (33%), Positives = 99/198 (50%)
Query: 28 NVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDI 87
+V F + AF+KAW C + +++P+GKTF++ P+TF GPCKSS I
Sbjct: 40 SVTSFGAIGDGKTDDTKAFLKAWEAVCKG-GHNRKILVPQGKTFMLKPLTFIGPCKSSTI 98
Query: 88 TIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKE 147
++ + G+++AP W + W S++ L + G GTIDGRG WW +N +
Sbjct: 99 SLSIRGNLVAPG--YTWYAGRYTTWISFDSINGLVVTGGGTIDGRGSLWWG---NVNNR- 152
Query: 148 GCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGI 207
P + F+ C SP+ HV + +E L + APG SPNTDGI
Sbjct: 153 ------PCAMHFNNCNGLRISNLRHLNSPRNHVGLSCSQNIEVRGLRMTAPGDSPNTDGI 206
Query: 208 HIQASSNVYIHNAHISNG 225
I V+IH++ I+ G
Sbjct: 207 DISNCIGVHIHDSVIATG 224
>TAIR|locus:2178052 [details] [associations]
symbol:AT5G39910 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00530705 RefSeq:NP_198807.1
UniGene:At.55265 ProteinModelPortal:F4KFW5
EnsemblPlants:AT5G39910.1 GeneID:833988 KEGG:ath:AT5G39910
OMA:NISRISC Uniprot:F4KFW5
Length = 373
Score = 230 (86.0 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 44/103 (42%), Positives = 59/103 (57%)
Query: 27 FNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSD 86
FNVL++ S AF AW +TC+ M IP+G TFL+ PI F GPCKS
Sbjct: 36 FNVLNYGAIGDGFSDDSKAFKDAWEDTCNYIGSESIMEIPEGNTFLLQPIEFHGPCKSKK 95
Query: 87 ITIMLSGSIIAPNGPNEWK--EDDKSKWFDIQSVDSLQIDGSG 127
I + +SG++IAP P EWK +DD +W + ++ L IDG G
Sbjct: 96 IILSISGNLIAPESPYEWKCNKDDCHQWIEFAHINGLYIDGHG 138
Score = 100 (40.3 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 193 LSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
L+I A G SPNTDGIHIQ S NV +++++I G
Sbjct: 185 LTITADGDSPNTDGIHIQRSQNVIVYDSNIRTG 217
Score = 38 (18.4 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 206 GIHIQASSNVYIHNAHISN 224
G+ I SSNV+I N + +
Sbjct: 148 GVVISHSSNVHISNIMVKD 166
>TAIR|locus:2127821 [details] [associations]
symbol:AT4G32370 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002687 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00544475 RefSeq:NP_194963.2
UniGene:At.54577 ProteinModelPortal:F4JUA3
EnsemblPlants:AT4G32370.1 GeneID:829371 KEGG:ath:AT4G32370
OMA:INICLSH PhylomeDB:F4JUA3 Uniprot:F4JUA3
Length = 342
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 64/184 (34%), Positives = 91/184 (49%)
Query: 43 SMAFIKAWNNTCS-ATAKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGP 101
S AF +AW C T +VI K +T+ + P TF GPC SS+I I + G + P P
Sbjct: 51 SQAFQEAWKGLCEDETPNGSALVIRKNETYTLQPSTFRGPCVSSNIHIQIDGKLEGPRKP 110
Query: 102 NEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDR 161
WK + W + V+ L I+GSG ++ G+AWW S ++K+ PT + F
Sbjct: 111 IYWKNKENRSWLGFKDVEGLVINGSGVLNPHGEAWWK-SVSLSKR-------PTTISFAS 162
Query: 162 CXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAH 221
C SP+ H+++ GC L I AP SPNTDGI+I S + I ++
Sbjct: 163 CMDIVYNGLHHINSPRNHISIYGCTNATLSNLDISAPEDSPNTDGINICLSHRIQILDSS 222
Query: 222 ISNG 225
I G
Sbjct: 223 IQTG 226
>TAIR|locus:2222657 [details] [associations]
symbol:AT5G14650 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 KO:K01184 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AL163792
IPI:IPI00547360 PIR:T48638 RefSeq:NP_196969.1 UniGene:At.31902
ProteinModelPortal:Q9LYJ5 SMR:Q9LYJ5 STRING:Q9LYJ5 PRIDE:Q9LYJ5
EnsemblPlants:AT5G14650.1 GeneID:831317 KEGG:ath:AT5G14650
TAIR:At5g14650 InParanoid:Q9LYJ5 OMA:NYINIKG PhylomeDB:Q9LYJ5
ProtClustDB:CLSN2916713 Genevestigator:Q9LYJ5 Uniprot:Q9LYJ5
Length = 435
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 68/199 (34%), Positives = 95/199 (47%)
Query: 28 NVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGP-CKSSD 86
NVLD + AF AW C A T+++P G TFLV P++F G CK
Sbjct: 52 NVLDHGAKGDGTSDDTKAFEDAWQVACKVAAS--TLLVPSGSTFLVGPVSFLGKECKEK- 108
Query: 87 ITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKK 146
I L G IIAP + W +W + +++ + I G G IDGRG WW+ + K
Sbjct: 109 IVFQLEGKIIAPTSASAWGSG-LLQWIEFKALQGITIKGKGIIDGRGSVWWNDM--MGTK 165
Query: 147 EGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDG 206
K PT L+F SPQTH+ CI ++ + +PG SPNTDG
Sbjct: 166 MPRTK--PTALRFYGSNGVTVSGITIQNSPQTHLKFDNCISIQVSDFTTSSPGDSPNTDG 223
Query: 207 IHIQASSNVYIHNAHISNG 225
IH+Q S + I+ + ++ G
Sbjct: 224 IHLQNSQDAVIYRSTLACG 242
>TAIR|locus:2156314 [details] [associations]
symbol:AT5G44830 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GO:GO:0005576 GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AB016874 ProtClustDB:CLSN2687281
IPI:IPI00516336 RefSeq:NP_199296.1 UniGene:At.55365
ProteinModelPortal:Q9FIY9 SMR:Q9FIY9 STRING:Q9FIY9
EnsemblPlants:AT5G44830.1 GeneID:834513 KEGG:ath:AT5G44830
TAIR:At5g44830 InParanoid:Q9FIY9 OMA:INTNDAN PhylomeDB:Q9FIY9
Genevestigator:Q9FIY9 Uniprot:Q9FIY9
Length = 332
Score = 200 (75.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 54 CSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWF 113
C + S T +IP +TFL+ P+TF GPCKS + + G I+AP W E +W
Sbjct: 2 CGSGGNSKTFLIPSNQTFLLQPLTFQGPCKSPSVQVKFDGKIVAPINKAAWSESKLFRWV 61
Query: 114 DIQSVDSLQIDGSGTIDGRGKAWW 137
+ + L ++GSGTI GRG ++W
Sbjct: 62 SFKEIIGLTVNGSGTIHGRGSSFW 85
Score = 120 (47.3 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 157 LKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVY 216
L F RC SP+ H+++ C V+ + + AP SPNTDGI+I SS+V
Sbjct: 88 LHFQRCNDLKIIGITSFNSPRNHISISECKRVQLTKIKLVAPEDSPNTDGINISGSSDVD 147
Query: 217 IHNAHISNG 225
+++ I G
Sbjct: 148 VYDTFIGTG 156
>TAIR|locus:2043924 [details] [associations]
symbol:AT2G43870 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC002333
EMBL:DQ446620 IPI:IPI00544593 PIR:E84871 RefSeq:NP_181915.1
UniGene:At.53114 HSSP:P26509 ProteinModelPortal:O22817 SMR:O22817
EnsemblPlants:AT2G43870.1 GeneID:818991 KEGG:ath:AT2G43870
TAIR:At2g43870 InParanoid:O22817 OMA:KTTWFTG PhylomeDB:O22817
ProtClustDB:CLSN2716978 ArrayExpress:O22817 Genevestigator:O22817
Uniprot:O22817
Length = 384
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 73/219 (33%), Positives = 108/219 (49%)
Query: 8 ILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPK 67
+L+ + IS+ S A +NVL F + AF+ W C A+++ T+V+PK
Sbjct: 6 VLFVFFFISSCS----AQSYNVLSFGAKPDGKTDATKAFMAVWQTAC-ASSRPVTIVVPK 60
Query: 68 GKTFLVHPITFTGP-CKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGS 126
G+ FL+ +TF G CK +T + G+++AP +D W Q +D + + G
Sbjct: 61 GR-FLLRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVIGNEDY--WIFFQHLDGITVYG- 116
Query: 127 GTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCI 186
G +D RG + WD CK + K C A T+ F S HV + GC
Sbjct: 117 GVLDARGASLWD--CKKSGKN-CPSGATTI-GFQSSSNVVVSGLTSLNSQMFHVVINGCN 172
Query: 187 GVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
V+ + + A G SPNTDGIH+Q+SS+V I N IS G
Sbjct: 173 NVKLQGVKVLAAGNSPNTDGIHVQSSSSVSIFNTKISTG 211
>UNIPROTKB|Q6H9K0 [details] [associations]
symbol:plaa2 "Exopolygalacturonase" species:140101
"Platanus x acerifolia" [GO:0005575 "cellular_component"
evidence=ND] [GO:0019863 "IgE binding" evidence=IDA] [GO:0045490
"pectin catabolic process" evidence=IDA] [GO:0047911 "galacturan
1,4-alpha-galacturonidase activity" evidence=IDA]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
GO:GO:0005576 GO:GO:0045490 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0019863
GO:GO:0047911 EMBL:AJ586898 ProteinModelPortal:Q6H9K0
Allergome:3426 Allergome:573 Uniprot:Q6H9K0
Length = 377
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 69/207 (33%), Positives = 103/207 (49%)
Query: 20 IRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFT 79
++ + FNV D+ S A +KAW C++ S T++IPKG + + +
Sbjct: 3 VQSSGSVFNVNDYGAKGAGDI--SQAVMKAWKAACASQGPS-TVLIPKGN-YNMGEVAMQ 58
Query: 80 GPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGK-AWWD 138
GPCK S I + G + AP P+++K D W +D L + G+GT+DG+G+ AW
Sbjct: 59 GPCKGSKIGFQIDGVVKAPADPSKFKSDG---WVSFYRIDGLTVSGTGTLDGQGQTAWAK 115
Query: 139 ISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAP 198
+C +K C K A L+FD S H+ V+ C + F +++ AP
Sbjct: 116 NNC--DKNPNC-KHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAP 172
Query: 199 GTSPNTDGIHIQASSNVYIHNAHISNG 225
GTS NTDGIH+ S V I N I+ G
Sbjct: 173 GTSINTDGIHVGISKGVTITNTKIATG 199
>TAIR|locus:2119485 [details] [associations]
symbol:AT4G13760 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002687 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00536611 RefSeq:NP_193112.2
UniGene:At.54312 ProteinModelPortal:F4JTS9 SMR:F4JTS9
EnsemblPlants:AT4G13760.1 GeneID:827010 KEGG:ath:AT4G13760
OMA:NPRITIS ArrayExpress:F4JTS9 Uniprot:F4JTS9
Length = 404
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 70/221 (31%), Positives = 102/221 (46%)
Query: 5 LCAILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMV 64
LC F+ + S +IR FNV + F WN C + S +
Sbjct: 11 LCVSFLFIVVASRPTIRPKM--FNVQRHGSKSDGKTDNTNVFTSVWNRACRRKSGSSKIY 68
Query: 65 IPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQID 124
+PKG TF + + F GPCK+ I ++ G+++AP PN K+D W + ++ L I
Sbjct: 69 VPKG-TFYLGGVEFVGPCKNP-IEFLIDGTLLAPANPNNIKQDT---WIKFKYINDLSIS 123
Query: 125 GSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMG 184
GSGT+DG+GK W ++ +K C KLA T + F S H
Sbjct: 124 GSGTLDGQGKQSWPLN-DCHKNPNCPKLAMT-MGFAFVNNSNIKDITSLNSKMGHFNFFS 181
Query: 185 CIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
++I APG SPNTDGI + + SN++I N +I G
Sbjct: 182 VHHFNITGVTITAPGNSPNTDGIKMGSCSNIHISNTNIGTG 222
>TAIR|locus:2030791 [details] [associations]
symbol:AT1G43090 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC026757
HSSP:P26509 ProtClustDB:CLSN2679499 IPI:IPI00535097 PIR:B96498
RefSeq:NP_175004.1 UniGene:At.52008 ProteinModelPortal:Q9C8C3
EnsemblPlants:AT1G43090.1 GeneID:840908 KEGG:ath:AT1G43090
TAIR:At1g43090 InParanoid:Q9C8C3 OMA:CTANDAS PhylomeDB:Q9C8C3
Genevestigator:Q9C8C3 Uniprot:Q9C8C3
Length = 444
Score = 292 (107.8 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 69/221 (31%), Positives = 108/221 (48%)
Query: 5 LCAILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMV 64
LC L FL+++ + I FNV + + AF W + C+ + S +
Sbjct: 11 LC--LSFLFIVVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKHACTRISGSSKIY 68
Query: 65 IPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQID 124
+PKG TF + + F GPCK+ I ++ G+++AP P + K+D W + + +++L I
Sbjct: 69 VPKG-TFYLGGVEFVGPCKNP-IEFVIDGTLLAPANPRDIKQDT---WINFRYINNLSIS 123
Query: 125 GSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMG 184
GSGT+DG+GK W ++ +K C KLA T + F S H
Sbjct: 124 GSGTLDGQGKYSWPLN-DCHKNTNCPKLAMT-MGFAFVNNSRIKDITSLNSKMGHFNFFS 181
Query: 185 CIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
++I APG SPNTDGI + + SN++I N +I G
Sbjct: 182 VHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTG 222
>TAIR|locus:2030797 [details] [associations]
symbol:AT1G43080 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC026757 HSSP:P26509
ProtClustDB:CLSN2679499 EMBL:DQ056483 IPI:IPI00545441 PIR:A96498
RefSeq:NP_175003.1 UniGene:At.52007 ProteinModelPortal:Q9C8C4
SMR:Q9C8C4 PRIDE:Q9C8C4 EnsemblPlants:AT1G43080.1 GeneID:840907
KEGG:ath:AT1G43080 TAIR:At1g43080 InParanoid:Q9C8C4 OMA:VCENING
PhylomeDB:Q9C8C4 Genevestigator:Q9C8C4 Uniprot:Q9C8C4
Length = 404
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 69/221 (31%), Positives = 106/221 (47%)
Query: 5 LCAILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMV 64
LC F+ + S +IR FNV + + AF W C+ + S +
Sbjct: 11 LCLSFLFIAVASRPTIRPKV--FNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIY 68
Query: 65 IPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQID 124
+PKG TF + + F GPCK+ I ++ G+++AP P + K+D W + + +++L I
Sbjct: 69 VPKG-TFYLGGVEFVGPCKNP-IEFVIDGTLLAPANPRDIKQDT---WINFRYINNLSIS 123
Query: 125 GSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMG 184
GSGT+DG+GK W ++ +K C KLA T + F S H
Sbjct: 124 GSGTLDGQGKYSWPLN-DCHKNTNCPKLAMT-MGFAFVNNSRIKDITSLNSKMGHFNFFS 181
Query: 185 CIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
++I APG SPNTDGI + + SN++I N +I G
Sbjct: 182 VHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTG 222
>TAIR|locus:2080422 [details] [associations]
symbol:AT3G59850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 KO:K01184 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
ProtClustDB:CLSN2716978 EMBL:BT015766 EMBL:BT020180 IPI:IPI00538167
RefSeq:NP_191544.2 UniGene:At.34545 ProteinModelPortal:Q5XF50
STRING:Q5XF50 EnsemblPlants:AT3G59850.1 GeneID:825155
KEGG:ath:AT3G59850 TAIR:At3g59850 InParanoid:Q5XF50 OMA:WAKACAS
PhylomeDB:Q5XF50 Genevestigator:Q5XF50 Uniprot:Q5XF50
Length = 388
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 73/227 (32%), Positives = 112/227 (49%)
Query: 1 MDADLCAILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKS 60
M + L +L FL +S++S A +N+L + + AF W C A+ K
Sbjct: 1 MHSSLLIVLLFLLSVSSSS----AQTYNILSYGAKPDGKTDSTKAFTVLWAKAC-ASVKP 55
Query: 61 PTMVIPKGKTFLVHPITFTGP-CKSSDITIMLSGSIIAPNGPNEWKEDDKSK-WFDIQSV 118
T+++PKG+ FL+ I F G CK +T + G+++AP+ +++ K W Q +
Sbjct: 56 VTILVPKGR-FLLRSIIFDGSKCKRKSVTFRIQGTLVAPS---DYRVIGKENYWILFQHL 111
Query: 119 DSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQT 178
D + + G G +D +G + W SCK + K C A T + F S
Sbjct: 112 DGISVYG-GVLDAQGASLW--SCKKSGKN-CPSGA-TSIGFQSSRNVVISGLTSLNSQMF 166
Query: 179 HVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
HV + GC V+ + + A G SPNTDGIH+Q+SS V I N+ IS G
Sbjct: 167 HVAINGCSNVKLDGVKVSADGNSPNTDGIHVQSSSTVSILNSKISTG 213
>TAIR|locus:2031963 [details] [associations]
symbol:AT1G05660 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
EMBL:AC007153 ProtClustDB:PLN02155 IPI:IPI00535049 PIR:G86190
RefSeq:NP_172057.1 UniGene:At.51493 UniGene:At.69599
ProteinModelPortal:Q9SYK7 SMR:Q9SYK7 EnsemblPlants:AT1G05660.1
GeneID:837073 KEGG:ath:AT1G05660 TAIR:At1g05660 InParanoid:Q9SYK7
OMA:CPTHEGC PhylomeDB:Q9SYK7 Genevestigator:Q9SYK7 Uniprot:Q9SYK7
Length = 394
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 70/213 (32%), Positives = 103/213 (48%)
Query: 14 LISTASIRINADE-FNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFL 72
L++ + I+A FNV+ F + AF+KAW C +A S T+V+PKG TFL
Sbjct: 14 LLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGAC-VSASSATVVVPKG-TFL 71
Query: 73 VHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGR 132
+ ITF GPCKS IT ++G++IAP + + W V+ + G GT D R
Sbjct: 72 LKVITFGGPCKSK-ITFQVAGTVIAPEDYRTF--GNSGFWILFNKVNRFSLVG-GTFDAR 127
Query: 133 GKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGF 192
+W SC+ + C ++ F+ S TH+T+ GC V
Sbjct: 128 ANGFW--SCR-KSGQNCPPGVRSI-SFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRN 183
Query: 193 LSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
+ + APG SPNTDG H+Q S+ V + + G
Sbjct: 184 VKLVAPGNSPNTDGFHVQHSTGVTFTGSTVQTG 216
>TAIR|locus:2016239 [details] [associations]
symbol:AT1G80140 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 IPI:IPI00526406 RefSeq:NP_178131.1 UniGene:At.52577
ProteinModelPortal:F4HS31 SMR:F4HS31 EnsemblPlants:AT1G80140.1
GeneID:844354 KEGG:ath:AT1G80140 OMA:GIHITSS Uniprot:F4HS31
Length = 336
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 59/163 (36%), Positives = 85/163 (52%)
Query: 65 IPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKS--KWFDIQSVDSLQ 122
+P GK FL++ + FTGPC + ++ G +IA + P +W + W VD L
Sbjct: 6 VPAGKVFLLNSLHFTGPCIPKPLLFIIDGEMIAQSDPQKWGNGENGVIPWLIFDQVDGLA 65
Query: 123 IDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTV 182
I G G +DG+GK+WWDI C+ + P ++ F C S QTHV V
Sbjct: 66 IVGRGLLDGQGKSWWDIHCRDHP-------GP-MMTFSNCGNVTLKSLRFRNSAQTHVLV 117
Query: 183 MGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
MG V + I +P SPNTDGIHI +S+ V I+++ I+ G
Sbjct: 118 MGSQNVYIDDIKITSPEASPNTDGIHITSSTAVSINHSDIATG 160
>TAIR|locus:2047223 [details] [associations]
symbol:AT2G15450 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC006920
ProtClustDB:CLSN2679499 IPI:IPI00530935 PIR:B84529
RefSeq:NP_179147.1 UniGene:At.52749 ProteinModelPortal:Q9SJN7
SMR:Q9SJN7 EnsemblPlants:AT2G15450.1 GeneID:816037
KEGG:ath:AT2G15450 TAIR:At2g15450 InParanoid:Q9SJN7
PhylomeDB:Q9SJN7 Genevestigator:Q9SJN7 Uniprot:Q9SJN7
Length = 404
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 69/222 (31%), Positives = 107/222 (48%)
Query: 5 LCAILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMV 64
LC L+F+ + S +++R FNV + AF W+ C + S +
Sbjct: 11 LCFCLFFIVVASRSTVRPKV--FNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIY 68
Query: 65 IPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQID 124
+PKG TF + + F GPCK+ I ++ G+++AP P++ K+D W + + +++L I
Sbjct: 69 VPKG-TFYLGGVEFVGPCKNP-IEFIIDGTLLAPANPSDIKQDT---WINFRYINNLSIS 123
Query: 125 GSGTIDGRGKAWWDIS-CKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVM 183
GSGT+DG+GK W + C N C KLA T + F S H
Sbjct: 124 GSGTLDGQGKQSWPHNDCHTNPN--CPKLAMT-MGFAFVNNSNIKDITSLNSKMGHFNFF 180
Query: 184 GCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
++I APG SPNTDGI + + SN+ I + +I G
Sbjct: 181 SVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIGTG 222
>TAIR|locus:2047218 [details] [associations]
symbol:AT2G15460 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC006920
ProtClustDB:CLSN2679499 IPI:IPI00544781 PIR:C84529
RefSeq:NP_179148.1 UniGene:At.52750 ProteinModelPortal:Q8S8F3
EnsemblPlants:AT2G15460.1 GeneID:816038 KEGG:ath:AT2G15460
TAIR:At2g15460 InParanoid:Q8S8F3 PhylomeDB:Q8S8F3
Genevestigator:Q8S8F3 Uniprot:Q8S8F3
Length = 402
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 69/222 (31%), Positives = 107/222 (48%)
Query: 5 LCAILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMV 64
LC L+F+ + S +++R FNV + AF W+ C + S +
Sbjct: 11 LCFCLFFIVVASRSTVRPKV--FNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIY 68
Query: 65 IPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQID 124
+PKG TF + + F GPCK+ I ++ G+++AP P++ K+D W + + +++L I
Sbjct: 69 VPKG-TFYLGGVEFVGPCKNP-IEFIIDGTLLAPANPSDIKQDT---WINFRYINNLSIS 123
Query: 125 GSGTIDGRGKAWWDIS-CKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVM 183
GSGT+DG+GK W + C N C KLA T + F S H
Sbjct: 124 GSGTLDGQGKQSWPHNDCHTNPN--CPKLAMT-MGFAFVNNSNIKDITSLNSKMGHFNFF 180
Query: 184 GCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
++I APG SPNTDGI + + SN+ I + +I G
Sbjct: 181 SVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIGTG 222
>TAIR|locus:2088842 [details] [associations]
symbol:AT3G26610 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:X98130
EMBL:AB028611 EMBL:AK117620 IPI:IPI00530630 RefSeq:NP_189293.1
UniGene:At.37184 ProteinModelPortal:Q38958 SMR:Q38958
EnsemblPlants:AT3G26610.1 GeneID:822270 KEGG:ath:AT3G26610
TAIR:At3g26610 InParanoid:Q38958 OMA:QWLNFKW PhylomeDB:Q38958
ProtClustDB:CLSN2684866 Genevestigator:Q38958 Uniprot:Q38958
Length = 470
Score = 281 (104.0 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 61/205 (29%), Positives = 94/205 (45%)
Query: 23 NADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPC 82
N FN+ + S A + AW C + IP G FLV +T GPC
Sbjct: 63 NEGVFNIFSYGAKGDGVSDDSKALVGAWKAACKVVGGK--VEIPAGTQFLVKAVTLQGPC 120
Query: 83 KSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISC- 141
K + + + G ++AP W +W + + V L I GSGT++GRG WW++
Sbjct: 121 KEETV-VQIEGILVAPEKIGSWPNSSLFQWLNFKWVSHLTIQGSGTLNGRGYNWWNLDTY 179
Query: 142 KINKKEGCVK-LAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGT 200
+ + + + PT L+F SP H+ GV+ ++I +P
Sbjct: 180 QTQTRNKYIPPMKPTALRFYSSNNVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPEN 239
Query: 201 SPNTDGIHIQASSNVYIHNAHISNG 225
SPNTDGIH+Q + NV I +++I+ G
Sbjct: 240 SPNTDGIHLQNTRNVEIQHSNIACG 264
>TAIR|locus:2031953 [details] [associations]
symbol:AT1G05650 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
EMBL:AC007153 IPI:IPI00525299 PIR:F86190 RefSeq:NP_172056.1
UniGene:At.51492 ProteinModelPortal:Q9SYK6 SMR:Q9SYK6 PaxDb:Q9SYK6
PRIDE:Q9SYK6 EnsemblPlants:AT1G05650.1 GeneID:837072
KEGG:ath:AT1G05650 TAIR:At1g05650 InParanoid:Q9SYK6 OMA:TRNFLIS
PhylomeDB:Q9SYK6 ProtClustDB:PLN02155 Genevestigator:Q9SYK6
Uniprot:Q9SYK6
Length = 394
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 70/218 (32%), Positives = 106/218 (48%)
Query: 8 ILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPK 67
+L F+ + S+ASI FNV+ F + AF+KAW C + A S T+V+P
Sbjct: 14 LLTFIDVSSSASI-----VFNVVSFGAKPDGVTDSTAAFLKAWQGACGSAA-SATVVVPT 67
Query: 68 GKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSG 127
G TFL+ ITF GPCKS IT ++G+++AP + + W V+ + G G
Sbjct: 68 G-TFLLKVITFGGPCKSK-ITFQVTGTVVAPEDYRTF--GNSGSWILFNKVNRFSLVG-G 122
Query: 128 TIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIG 187
T D RG +W SC+ + C ++ F+ S +H+T+ GC
Sbjct: 123 TFDARGSGFW--SCR-KSGQNCPPGVRSI-SFNSAKDVIISGVKSMNSQVSHMTLNGCTN 178
Query: 188 VEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
V + + APG SPNTDG +Q S+ V + + + G
Sbjct: 179 VAVRNIRLVAPGDSPNTDGFTVQFSTGVTLTGSTVQTG 216
>TAIR|locus:2066251 [details] [associations]
symbol:AT2G26620 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
EMBL:AC002505 IPI:IPI00545169 PIR:T00995 RefSeq:NP_180230.1
UniGene:At.52927 ProteinModelPortal:O48729 SMR:O48729
EnsemblPlants:AT2G26620.1 GeneID:817203 KEGG:ath:AT2G26620
TAIR:At2g26620 InParanoid:O48729 OMA:ISNINCG PhylomeDB:O48729
ProtClustDB:CLSN2679499 ArrayExpress:O48729 Genevestigator:O48729
Uniprot:O48729
Length = 402
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 68/221 (30%), Positives = 105/221 (47%)
Query: 5 LCAILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMV 64
LC L + + S ++IR FNV + AF W+ C + S +
Sbjct: 11 LCLSLLLIVVASRSTIRPKV--FNVQRHGSKPDGKTDNTNAFTSIWSRACKRISGSSKIY 68
Query: 65 IPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQID 124
+PKG TF + + F GPCK+ I ++ G+++AP PN+ K+D W + + +++L I
Sbjct: 69 VPKG-TFYLGGVEFVGPCKNP-IEFIIDGTLLAPANPNDIKQDT---WINFRYINNLSIS 123
Query: 125 GSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMG 184
GSGT+DG+GK W ++ +K C KLA + + F S H
Sbjct: 124 GSGTLDGQGKQSWPLN-DCHKNPNCPKLAIS-MGFAFVNNSNIKDITSLNSKMGHFNFFF 181
Query: 185 CIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
++I AP SPNTDGI + + SN+ I N +I G
Sbjct: 182 VHHFNITGVTITAPSDSPNTDGIKMGSCSNIQISNTNIGTG 222
>TAIR|locus:2043894 [details] [associations]
symbol:AT2G43880 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC004005
IPI:IPI00519414 PIR:T00668 RefSeq:NP_181916.1 UniGene:At.36829
ProteinModelPortal:Q9SLM8 SMR:Q9SLM8 PaxDb:Q9SLM8 PRIDE:Q9SLM8
EnsemblPlants:AT2G43880.1 GeneID:818992 KEGG:ath:AT2G43880
TAIR:At2g43880 InParanoid:Q9SLM8 OMA:GDYANEE PhylomeDB:Q9SLM8
ProtClustDB:CLSN2912912 ArrayExpress:Q9SLM8 Genevestigator:Q9SLM8
Uniprot:Q9SLM8
Length = 394
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 72/224 (32%), Positives = 108/224 (48%)
Query: 6 CAILYF----LYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSP 61
CAI++F +LI ++ FNV + + +F+ AW+ C + A++
Sbjct: 9 CAIIFFSINIFFLIKSSHAM---PSFNVQRYGARGDGRADATKSFLTAWSLACGSRARA- 64
Query: 62 TMVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSL 121
+ +P+G T+LV + F GPCK+ IT G+++AP N W + W V+ +
Sbjct: 65 MVYVPRG-TYLVKNLVFWGPCKNI-ITFKNDGTLVAP--ANYWDIGNSGYWILFAKVNRI 120
Query: 122 QIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVT 181
+ G GTID RG +W SC+ K C + A ++ F C S HVT
Sbjct: 121 SVYG-GTIDARGAGYW--SCR-KKGSHCPQGARSI-SFSWCNNVLLSGLSSFNSQNMHVT 175
Query: 182 VMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
V V + I+AP SPNTDGIH+Q+SS V I I+ G
Sbjct: 176 VHHSSNVRIENVRIRAPSGSPNTDGIHVQSSSGVTISGGTIATG 219
>TAIR|locus:2030803 [details] [associations]
symbol:AT1G43100 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC026757
HSSP:P26509 ProtClustDB:CLSN2679499 IPI:IPI00518656 PIR:C96498
RefSeq:NP_175005.1 UniGene:At.52009 ProteinModelPortal:Q9C8C2
SMR:Q9C8C2 EnsemblPlants:AT1G43100.1 GeneID:840909
KEGG:ath:AT1G43100 TAIR:At1g43100 InParanoid:Q9C8C2
PhylomeDB:Q9C8C2 Genevestigator:Q9C8C2 Uniprot:Q9C8C2
Length = 444
Score = 273 (101.2 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 67/221 (30%), Positives = 105/221 (47%)
Query: 5 LCAILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMV 64
LC F+ + S +IR FNV + + AF W C+ + S +
Sbjct: 11 LCLSFLFIAVASRPTIRPKV--FNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIY 68
Query: 65 IPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQID 124
+PKGK F + + F GP K+ I ++ G+++AP P + K+D W + + +++L I
Sbjct: 69 VPKGK-FYLGGVEFVGPYKNP-IEFVIDGTLLAPANPRDIKQDT---WINFRYINNLSIS 123
Query: 125 GSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMG 184
GSGT+DG+GK W ++ +K C +LA T + F S H
Sbjct: 124 GSGTLDGQGKYSWPLN-DCHKNTNCPELAMT-MGFAFVNNSRIKDITSLNSKMGHFNFFS 181
Query: 185 CIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
++I APG SPNTDGI + + SN++I N +I G
Sbjct: 182 VHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTG 222
>TAIR|locus:2047153 [details] [associations]
symbol:AT2G15470 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00537081 RefSeq:NP_179149.2
UniGene:At.52751 ProteinModelPortal:F4IIG2 SMR:F4IIG2
EnsemblPlants:AT2G15470.1 GeneID:816039 KEGG:ath:AT2G15470
OMA:STNIHIT ArrayExpress:F4IIG2 Uniprot:F4IIG2
Length = 404
Score = 270 (100.1 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 68/222 (30%), Positives = 106/222 (47%)
Query: 5 LCAILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMV 64
LC L+F+ + S +++R FNV + AF W+ C + S +
Sbjct: 11 LCFCLFFIVVASRSTVRPKV--FNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIY 68
Query: 65 IPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQID 124
+PKG TF + + F G CK+ I ++ G+++AP P++ K+D W + + +++L I
Sbjct: 69 VPKG-TFYLGGVEFVGLCKNP-IEFIIDGTLLAPANPSDIKQDT---WINFRYINNLSIS 123
Query: 125 GSGTIDGRGKAWWDIS-CKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVM 183
GSGT+DG+GK W + C N C KLA T + F S H
Sbjct: 124 GSGTLDGQGKQSWPHNDCHTNPN--CPKLAMT-MGFAFVNNSNIKDITSLNSKMGHFNFF 180
Query: 184 GCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
++I APG SPNTDGI + + SN+ I + +I G
Sbjct: 181 SVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQISDTNIGTG 222
>TAIR|locus:2063114 [details] [associations]
symbol:AT2G40310 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 EMBL:AF085279
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC007020
ProtClustDB:CLSN2679499 IPI:IPI00533646 PIR:H84827
RefSeq:NP_181560.1 UniGene:At.53084 ProteinModelPortal:Q9S761
SMR:Q9S761 EnsemblPlants:AT2G40310.1 GeneID:818623
KEGG:ath:AT2G40310 TAIR:At2g40310 InParanoid:Q9S761 OMA:CHESGAM
PhylomeDB:Q9S761 ArrayExpress:Q9S761 Genevestigator:Q9S761
Uniprot:Q9S761
Length = 404
Score = 269 (99.8 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 66/221 (29%), Positives = 104/221 (47%)
Query: 5 LCAILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMV 64
LC F+++ S +IR FNV + F W+ C + S +
Sbjct: 11 LCVSFLFIFVASRPTIRPKT--FNVQRHGSKPDGKTDNANVFTSIWSRACKRKSGSSKIY 68
Query: 65 IPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQID 124
+PKG F + + F GPCK+ I ++ G+++AP P++ K+D W + + +++L I
Sbjct: 69 VPKG-IFYLGGVEFVGPCKNP-IEFVIDGTLLAPANPSDIKQDT---WINFRYINNLSIS 123
Query: 125 GSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMG 184
GSGT+DG+GK W ++ +K C KLA T + F S H
Sbjct: 124 GSGTLDGQGKQSWPLN-DCHKNLNCPKLAMT-MGFAFVNNSNIKDITSLNSKMGHFNFFS 181
Query: 185 CIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
++I A G SPNTDGI + + SN++I N +I G
Sbjct: 182 VHHFNITGVTITASGDSPNTDGIKMGSCSNMHISNTNIGTG 222
>TAIR|locus:2046555 [details] [associations]
symbol:AT2G33160 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004650
"polygalacturonase activity" evidence=IEA;ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA;ISS] InterPro:IPR000743
InterPro:IPR012337 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 GO:GO:0003676
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 SUPFAM:SSF53098 EMBL:AC002334
IPI:IPI00526966 PIR:A84742 RefSeq:NP_180874.1 UniGene:At.50116
ProteinModelPortal:O49319 SMR:O49319 EnsemblPlants:AT2G33160.1
GeneID:817877 KEGG:ath:AT2G33160 TAIR:At2g33160 InParanoid:O49319
PhylomeDB:O49319 ArrayExpress:O49319 Genevestigator:O49319
Uniprot:O49319
Length = 664
Score = 276 (102.2 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 70/222 (31%), Positives = 101/222 (45%)
Query: 5 LCA-ILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTM 63
LC L+F ST F+V ++ + AF KAWN C + T+
Sbjct: 9 LCVPSLFFFLAASTKEYPGQPKIFDVRNYGARADSQRDNAFAFTKAWNEACQWSYGRSTV 68
Query: 64 VIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQI 123
IP G F + +TF+GPCKSS IT + G+++AP P +++ W + VD+L +
Sbjct: 69 YIPSG-IFYLRQVTFSGPCKSS-ITFFIRGTLLAPRNPYAINQEE---WILFKYVDNLTV 123
Query: 124 DGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVM 183
G G +DG+G W ++ NK C LA + F S H +
Sbjct: 124 TGGGLLDGQGSYSWPLN-DCNKNTNCRTLAMNI-GFAFVKSSKINGLRSINSKMGHFNLF 181
Query: 184 GCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
++I APG SPNTDGI I SS++ I+N I G
Sbjct: 182 SVEDFNITGVTITAPGDSPNTDGIKIGKSSHMQIYNVTIGTG 223
>TAIR|locus:2032125 [details] [associations]
symbol:AT1G78400 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 IPI:IPI00544920
RefSeq:NP_177961.2 UniGene:At.52555 ProteinModelPortal:F4IA77
PRIDE:F4IA77 EnsemblPlants:AT1G78400.1 GeneID:844176
KEGG:ath:AT1G78400 OMA:INIDQRY ArrayExpress:F4IA77 Uniprot:F4IA77
Length = 404
Score = 264 (98.0 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 64/200 (32%), Positives = 98/200 (49%)
Query: 27 FNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSD 86
F+V + +MAF KAW + C P + IP G TF + + FTGPCKS
Sbjct: 35 FDVRSYGARGDGKTDNTMAFTKAWKDACQWKGL-PRVYIPFG-TFYLGAVAFTGPCKSR- 91
Query: 87 ITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDIS-CKINK 145
I+ ++ G+++AP PN K+D W + VD L + G G +DG+G W ++ C+ +
Sbjct: 92 ISFIIKGTLLAPKDPNAIKQDS---WIIFRYVDYLTVSGGGILDGQGSYSWPLNNCR--Q 146
Query: 146 KEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTD 205
C L P + F S H+ + ++I+APG SPNTD
Sbjct: 147 THNCRAL-PMNMGFQFVRFSRLTRIKSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTD 205
Query: 206 GIHIQASSNVYIHNAHISNG 225
GI I +S+++ IH+ I+ G
Sbjct: 206 GIKIGSSNHMKIHHVDIATG 225
>TAIR|locus:504955462 [details] [associations]
symbol:AT4G32375 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA;ISS] InterPro:IPR000743
Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576 EMBL:CP002687
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00531203 RefSeq:NP_680757.1 UniGene:At.54578
ProteinModelPortal:F4JUA4 SMR:F4JUA4 PRIDE:F4JUA4
EnsemblPlants:AT4G32375.1 GeneID:829372 KEGG:ath:AT4G32375
OMA:KPPTMFP Uniprot:F4JUA4
Length = 486
Score = 267 (99.0 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 60/184 (32%), Positives = 87/184 (47%)
Query: 44 MAFIKAWNNTCSATAKSPT--MVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGP 101
MAF +AWN C A T +VI +T++V P F GPC S +I I + G + AP
Sbjct: 4 MAFKEAWNALCEANVNGTTTSLVINANETYIVQPQLFQGPCASRNIHIQIDGKLEAPKMV 63
Query: 102 NEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDR 161
EW + W +V L ++GSG + G+AWW S + + + P + F
Sbjct: 64 REWGNYESKCWLCFTNVKGLVLNGSGILHPHGEAWWS-SIEHSHR-------PRTIGFSG 115
Query: 162 CXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAH 221
SP+ H++++ C V + AP SPNTDGI I S+N+ I N+
Sbjct: 116 SSNILYNGLTQMNSPKNHISILDCTNVTLSNFHLIAPKDSPNTDGIDIAHSNNIRIFNSS 175
Query: 222 ISNG 225
I G
Sbjct: 176 IQTG 179
>TAIR|locus:2020352 [details] [associations]
symbol:AT1G17150 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 OMA:ISNTHIS
IPI:IPI00546751 RefSeq:NP_173158.1 UniGene:At.51644
ProteinModelPortal:F4I650 SMR:F4I650 PRIDE:F4I650
EnsemblPlants:AT1G17150.1 GeneID:838286 KEGG:ath:AT1G17150
Uniprot:F4I650
Length = 402
Score = 262 (97.3 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 71/220 (32%), Positives = 102/220 (46%)
Query: 8 ILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPK 67
+L L ++T+ F+V + + AF AW + C S M IP
Sbjct: 14 LLLLLIAVTTSRPITRPKVFDVRSYGAKGDGKMDNTNAFTNAWKDACRWNGPSK-MYIPL 72
Query: 68 GKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSK-WFDIQSVDSLQIDGS 126
G TF + +TF GPC I+ ++ G+++AP PN +D K + W + + ++ L + G
Sbjct: 73 G-TFYLGGVTFVGPCDGK-ISFVIDGTLLAP--PNN--DDIKKEIWINFRYINYLTVFGD 126
Query: 127 GTIDGRGKAWWD-ISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGC 185
GT+DG+GK W I C+ K C KLA + FD S H +
Sbjct: 127 GTLDGQGKKSWSLIDCQ--KDNNCPKLAIN-MGFDFVKNSSMNGITSLNSKAGHFNFLSV 183
Query: 186 IGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
++I AP SPNTDGI I SSN+ I N HIS G
Sbjct: 184 DHFSITRVNIIAPSNSPNTDGIKIALSSNMQISNTHISTG 223
>TAIR|locus:2164773 [details] [associations]
symbol:AT5G48140 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009827
"plant-type cell wall modification" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB023039
EMBL:BT009687 EMBL:AK118684 IPI:IPI00543467 RefSeq:NP_199625.1
UniGene:At.7075 ProteinModelPortal:Q9LUB8 SMR:Q9LUB8 PaxDb:Q9LUB8
PRIDE:Q9LUB8 EnsemblPlants:AT5G48140.1 GeneID:834866
KEGG:ath:AT5G48140 TAIR:At5g48140 InParanoid:Q9LUB8 OMA:RYSHEEN
PhylomeDB:Q9LUB8 ProtClustDB:CLSN2684940 Genevestigator:Q9LUB8
Uniprot:Q9LUB8
Length = 395
Score = 258 (95.9 bits), Expect = 4.6e-22, P = 4.6e-22
Identities = 62/181 (34%), Positives = 91/181 (50%)
Query: 45 AFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEW 104
A +KA+N C KS T++IPKG+ + + I GPCK+ I I L G++ A N
Sbjct: 39 ALLKAFNEACQFPTKS-TVMIPKGE-YKLGEIVMMGPCKAP-IRIALLGTVKADGNAN-- 93
Query: 105 KEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXX 164
K KW ++++ +++G G DG G A W ++ +K C KL P ++FD
Sbjct: 94 ---GKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVN-NCHKTFNCKKL-PISIRFDFVTD 148
Query: 165 XXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISN 224
+ H+ V+G V F + I AP SPNTDGIH+ S + I N+ IS
Sbjct: 149 AKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFIST 208
Query: 225 G 225
G
Sbjct: 209 G 209
>TAIR|locus:2141877 [details] [associations]
symbol:AT4G18180 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002687 GO:GO:0005975 CAZy:GH28 HOGENOM:HOG000237792
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL161548 IPI:IPI00532207 PIR:E85204 RefSeq:NP_193552.1
UniGene:At.54387 ProteinModelPortal:Q9M0M1 SMR:Q9M0M1 PRIDE:Q9M0M1
EnsemblPlants:AT4G18180.1 GeneID:827543 KEGG:ath:AT4G18180
TAIR:At4g18180 InParanoid:Q9M0M1 OMA:HIALVEC PhylomeDB:Q9M0M1
ProtClustDB:PLN02188 ArrayExpress:Q9M0M1 Genevestigator:Q9M0M1
Uniprot:Q9M0M1
Length = 414
Score = 259 (96.2 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 61/199 (30%), Positives = 96/199 (48%)
Query: 28 NVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKS-SD 86
+V F + AF+ AW+ C +++ S ++IP+G+ F V + F+GPC + S+
Sbjct: 36 DVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGE-FSVGSLRFSGPCTNVSN 94
Query: 87 ITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKK 146
+T+ + S ++++ W ++ L + G GT DG+G W +
Sbjct: 95 LTVRVKAS----TDLSKYRSG--GGWIQFGWINGLTLTGGGTFDGQGALAWPFN-NCTSD 147
Query: 147 EGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDG 206
C KL PT LKF S H+ ++ C + L+I AP SPNTDG
Sbjct: 148 SNC-KLLPTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDG 206
Query: 207 IHIQASSNVYIHNAHISNG 225
IHI+ SSNVY +HI+ G
Sbjct: 207 IHIERSSNVYFSRSHIATG 225
>TAIR|locus:2024680 [details] [associations]
symbol:PGA4 "polygalacturonase 4" species:3702
"Arabidopsis thaliana" [GO:0004650 "polygalacturonase activity"
evidence=IEA;ISS] [GO:0005576 "extracellular region" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005618 GO:GO:0005576 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC009525
EMBL:X72291 EMBL:Y16230 EMBL:AF428425 EMBL:AY065210 EMBL:AY133812
IPI:IPI00532768 PIR:S34199 RefSeq:NP_171778.1 UniGene:At.22350
ProteinModelPortal:P49062 SMR:P49062 STRING:P49062 PaxDb:P49062
PRIDE:P49062 EnsemblPlants:AT1G02790.1 GeneID:839391
KEGG:ath:AT1G02790 TAIR:At1g02790 InParanoid:P49062 KO:K01213
OMA:LVFEDIV PhylomeDB:P49062 ProtClustDB:CLSN2912732
Genevestigator:P49062 GermOnline:AT1G02790 GO:GO:0047911
Uniprot:P49062
Length = 422
Score = 259 (96.2 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 65/204 (31%), Positives = 96/204 (47%)
Query: 23 NADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPC 82
N +++ F AF+ W C + + T+++PKG TFL P+ F GPC
Sbjct: 48 NPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPA-TLLVPKG-TFLAGPVIFAGPC 105
Query: 83 KSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDIS-C 141
KS +T+ + G+IIA E WF + VD+L + G+GT G+G+A W C
Sbjct: 106 KSK-VTVNVIGTIIATTSGYATPE-----WFLFERVDNLVLTGTGTFHGKGEAVWKADGC 159
Query: 142 KINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTS 201
KK C L PT LKF + H+ ++ V + + AP S
Sbjct: 160 --GKKVQC-NLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAES 216
Query: 202 PNTDGIHIQASSNVYIHNAHISNG 225
PNTDGIH+ + NV I ++ I+ G
Sbjct: 217 PNTDGIHLSNADNVSILDSTIATG 240
>TAIR|locus:2077412 [details] [associations]
symbol:AT3G07830 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0009827 "plant-type cell
wall modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483 ProtClustDB:CLSN2684940
IPI:IPI00535795 RefSeq:NP_187440.1 UniGene:At.40295
ProteinModelPortal:Q9SFD1 PRIDE:Q9SFD1 EnsemblPlants:AT3G07830.1
GeneID:819974 KEGG:ath:AT3G07830 TAIR:At3g07830 InParanoid:Q9SFD1
OMA:NIHFENI PhylomeDB:Q9SFD1 Genevestigator:Q9SFD1 Uniprot:Q9SFD1
Length = 397
Score = 255 (94.8 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 65/186 (34%), Positives = 94/186 (50%)
Query: 43 SMAFIKAWNNTCSATAKSPT---MVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPN 99
+ A ++A+ C +SPT +VIPKG+ F + I +GPCKS + I L G+++A
Sbjct: 37 TQALLRAFTTAC----QSPTPRKVVIPKGQ-FKLGEIMMSGPCKSP-VEITLLGTVLADG 90
Query: 100 GPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKF 159
KE KW Q +D +++G GT DG G A W ++ +K C KL P ++F
Sbjct: 91 NSIHGKE----KWVVFQRMDGFRLNGGGTFDGEGNAAWRVN-NCHKTFECKKL-PISIRF 144
Query: 160 DRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHN 219
D + H+ V+G + F + I AP SPNTDGIH+ S V I N
Sbjct: 145 DFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIIN 204
Query: 220 AHISNG 225
+ IS G
Sbjct: 205 SRISTG 210
>TAIR|locus:2077402 [details] [associations]
symbol:AT3G07820 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GO:GO:0005576 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483
ProtClustDB:CLSN2684940 UniGene:At.53217 EMBL:AY065239
EMBL:AY096534 EMBL:AY087578 IPI:IPI00529385 RefSeq:NP_187439.1
UniGene:At.3 ProteinModelPortal:Q9SFD2 SMR:Q9SFD2 STRING:Q9SFD2
PRIDE:Q9SFD2 EnsemblPlants:AT3G07820.1 GeneID:819973
KEGG:ath:AT3G07820 TAIR:At3g07820 InParanoid:Q9SFD2 OMA:ANAEVFT
PhylomeDB:Q9SFD2 ArrayExpress:Q9SFD2 Genevestigator:Q9SFD2
Uniprot:Q9SFD2
Length = 391
Score = 253 (94.1 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 65/214 (30%), Positives = 102/214 (47%)
Query: 12 LYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTF 71
+++I I NA+ F + + A +KA+ + C +++ S +VIPKG+ F
Sbjct: 10 IFIICLLGISANAEVFTI-----GSSSGSDITQALLKAFTSACQSSSPSK-VVIPKGE-F 62
Query: 72 LVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDG 131
+ I GPCK+ I + L G++ A + KE KW ++D +++G G DG
Sbjct: 63 KLGEIEMRGPCKAP-IEVTLQGTVKADGNAIQGKE----KWVVFGNIDGFKLNGGGAFDG 117
Query: 132 RGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFG 191
G A W ++ +K C KL P ++FD + H+ V+G +
Sbjct: 118 EGNAAWRVN-NCHKTFECKKL-PISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMN 175
Query: 192 FLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
+ I AP SPNTDGIH+ S V I N+ IS G
Sbjct: 176 NIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTG 209
>TAIR|locus:2043974 [details] [associations]
symbol:AT2G43860 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC002333
EMBL:DQ056577 IPI:IPI00540510 PIR:D84871 RefSeq:NP_181914.1
UniGene:At.53113 ProteinModelPortal:O22818 SMR:O22818 PRIDE:O22818
EnsemblPlants:AT2G43860.1 GeneID:818990 KEGG:ath:AT2G43860
GeneFarm:16 TAIR:At2g43860 InParanoid:O22818 OMA:CASANPT
PhylomeDB:O22818 ProtClustDB:CLSN2912911 Genevestigator:O22818
Uniprot:O22818
Length = 405
Score = 246 (91.7 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 68/223 (30%), Positives = 109/223 (48%)
Query: 5 LCAILYFLYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMV 64
L I+ LIS+ + I + NVL + + AF+ AW+ C A+A T++
Sbjct: 12 LALIILDFTLISSLAHPIPST-LNVLSYGAKPDGSKDSTKAFLAAWDVAC-ASANPTTII 69
Query: 65 IPKGKTFLVHPITFTG-PCKSSDITIMLSGSIIAPNGPNEWKEDDKSK-WFDIQSVDSLQ 122
+PKG+ FLV + F G CK + I+I ++GSI+AP +++ SK W + V +
Sbjct: 70 VPKGR-FLVGNLVFHGNECKQAPISIRIAGSIVAPE---DFRIIASSKHWIWFEDVTDVS 125
Query: 123 IDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTV 182
I G G +D +G + W CK N C A +++ F S + H+ +
Sbjct: 126 IYG-GILDAQGTSLW--KCKNNGGHNCPTGAKSLV-FSGSNNIKISGLTSINSQKFHIVI 181
Query: 183 MGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
V + + A SPNTDGIH+++S +V+I N+ I G
Sbjct: 182 DNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTG 224
>TAIR|locus:2051764 [details] [associations]
symbol:AT2G43890 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC004005
EMBL:DQ056578 IPI:IPI00519700 PIR:T00669 RefSeq:NP_181917.1
UniGene:At.53115 ProteinModelPortal:O80559 SMR:O80559 PRIDE:O80559
EnsemblPlants:AT2G43890.1 GeneID:818993 KEGG:ath:AT2G43890
TAIR:At2g43890 InParanoid:O80559 OMA:RNVLFQN PhylomeDB:O80559
ProtClustDB:CLSN2683098 ArrayExpress:O80559 Genevestigator:O80559
Uniprot:O80559
Length = 392
Score = 244 (91.0 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 62/220 (28%), Positives = 109/220 (49%)
Query: 8 ILYFL-YLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIP 66
+++F +L+ +S A +NV+ F + AF+ AW C + A + T+ +P
Sbjct: 11 LMFFSSFLLMKSSTA--ASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAA-AVTVTVP 67
Query: 67 KGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKE-DDKSKWFDIQSVDSLQIDG 125
+G +FL+ P+ F GPC+S IT + G+I+AP+ +++ + W V+ + I G
Sbjct: 68 RG-SFLLKPVEFRGPCRSR-ITFQIYGTIVAPS---DYRGLGNSGYWILFVKVNRISIIG 122
Query: 126 SGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGC 185
GT+D RG ++W +C+ + K C + + F+ S TH+ + C
Sbjct: 123 -GTLDARGASFW--ACRKSGKS-C-PVGARSMTFNWANDVVVSGLTSINSQTTHLVINSC 177
Query: 186 IGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
V + + AP SPNTDG+H+Q S+ V + + G
Sbjct: 178 NNVIVRKVKLVAPDQSPNTDGLHVQGSAGVTVTDGTFHTG 217
>TAIR|locus:2034131 [details] [associations]
symbol:AT1G65570 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GO:GO:0009506 GO:GO:0005576
GO:GO:0005975 CAZy:GH28 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 EMBL:AC001229
EMBL:DQ446397 IPI:IPI00540193 PIR:F96680 RefSeq:NP_176735.1
UniGene:At.52380 ProteinModelPortal:O04474 PRIDE:O04474
EnsemblPlants:AT1G65570.1 GeneID:842868 KEGG:ath:AT1G65570
TAIR:At1g65570 InParanoid:O04474 OMA:ITIIMSH PhylomeDB:O04474
ProtClustDB:CLSN2913520 ArrayExpress:O04474 Genevestigator:O04474
Uniprot:O04474
Length = 397
Score = 243 (90.6 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 63/200 (31%), Positives = 93/200 (46%)
Query: 28 NVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGP-CKSSD 86
NVL F + AF AW+ C S + +PKG+ + + F G CKS +
Sbjct: 32 NVLSFGANPNGIVESAKAFSDAWDAACGVE-DSVVIYVPKGRYLVSGEVRFEGESCKSRE 90
Query: 87 ITIMLSGSIIAPNGPNEWKE-DDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINK 145
IT+ + G++I GP ++ K WF V ++ + G G+ D +G W SCK N
Sbjct: 91 ITLRIDGTLI---GPQDYSLLGKKENWFSFSGVHNVTVLG-GSFDAKGSTLW--SCKANG 144
Query: 146 KEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTD 205
C + A T L+F S H+ + C ++ + I AP SPNTD
Sbjct: 145 YN-CPEGA-TTLRFMDSNNVKIKGVLSLNSQLFHIAINRCRNIKIEDVRIIAPDESPNTD 202
Query: 206 GIHIQASSNVYIHNAHISNG 225
GIHIQ S+++ + NA I G
Sbjct: 203 GIHIQLSTDIEVRNASIKTG 222
>TAIR|locus:2077437 [details] [associations]
symbol:AT3G07840 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009827
"plant-type cell wall modification" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483 ProtClustDB:CLSN2684940
IPI:IPI00522605 RefSeq:NP_187441.1 UniGene:At.53217
ProteinModelPortal:Q9SFD0 PRIDE:Q9SFD0 EnsemblPlants:AT3G07840.1
GeneID:819975 KEGG:ath:AT3G07840 TAIR:At3g07840 InParanoid:Q9SFD0
OMA:GIASEMH PhylomeDB:Q9SFD0 ArrayExpress:Q9SFD0
Genevestigator:Q9SFD0 Uniprot:Q9SFD0
Length = 401
Score = 243 (90.6 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 66/214 (30%), Positives = 101/214 (47%)
Query: 12 LYLISTASIRINADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTF 71
L++IS NA+ FNV + A +KA+ + C A S +VI KG+ F
Sbjct: 11 LFVISLLGFSANAEVFNV-----GGSPGSDITQALLKAFTSACQAPTASK-VVITKGE-F 63
Query: 72 LVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDG 131
+ I TGPCK+ + I L G++ A + KE +W ++ +++G G DG
Sbjct: 64 KLGEIEMTGPCKAP-VEINLQGTLKADGKAIQGKE----RWVVFLRINGFKLNGGGIFDG 118
Query: 132 RGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFG 191
G A W ++ +K C KL P ++FD + H+ V+G + F
Sbjct: 119 EGNAAWRVN-NCHKTFECKKL-PISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFD 176
Query: 192 FLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
+ + AP SPNTDGIH+ S V I N+ I+ G
Sbjct: 177 NVKVIAPAESPNTDGIHLGRSEGVKILNSKIATG 210
>TAIR|locus:2036581 [details] [associations]
symbol:AT1G60590 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0016556
"mRNA modification" evidence=RCA] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005576 GO:GO:0005975 EMBL:AC002292 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 HSSP:P26213
IPI:IPI00529839 PIR:B96631 RefSeq:NP_564758.2 UniGene:At.27368
ProteinModelPortal:O22699 SMR:O22699 EnsemblPlants:AT1G60590.1
GeneID:842353 KEGG:ath:AT1G60590 TAIR:At1g60590 InParanoid:O22699
OMA:PANGSRH PhylomeDB:O22699 ProtClustDB:CLSN2680767
Genevestigator:O22699 Uniprot:O22699
Length = 540
Score = 210 (79.0 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 42/115 (36%), Positives = 57/115 (49%)
Query: 23 NADEFNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPC 82
++ +FNVLDF + AF AW + C A TM+IP FLV PI+F+GP
Sbjct: 119 DSQQFNVLDFGAKGDGMSDDTQAFEAAWASACKVEAS--TMIIPPDYIFLVGPISFSGPY 176
Query: 83 KSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWW 137
++I L G I+AP W W + + + I G+G IDGRG WW
Sbjct: 177 CQANIVFQLEGMIVAPTDTESWG-GGLMWWIEFTKLSGITIQGNGVIDGRGTVWW 230
Score = 140 (54.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/150 (30%), Positives = 70/150 (46%)
Query: 76 ITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKA 135
I FT K S ITI +G +I G W++D S + I L + + ++ R
Sbjct: 206 IEFT---KLSGITIQGNG-VIDGRGTVWWQQDYLSD-YPIDDDFKLIVPLNNSVQERPPM 260
Query: 136 WWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSI 195
I ++N + +K PT L+F SPQ H+ C+ V +++
Sbjct: 261 --PIRSELNWRMPSIK--PTALRFYGSIDVTVTGITIQNSPQCHLKFDNCVKVLVHDVNV 316
Query: 196 QAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
+PG SPNTDGIH+Q + +V IH ++ G
Sbjct: 317 SSPGDSPNTDGIHLQNTRDVMIHTTTLACG 346
Score = 48 (22.0 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 205 DGIHIQAS-SNVYIHNAHISNG 225
D I IQ SNVY+HN + G
Sbjct: 348 DCISIQTGCSNVYVHNVNCGPG 369
>TAIR|locus:2019963 [details] [associations]
symbol:AT1G10640 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 IPI:IPI00531466
RefSeq:NP_563875.6 UniGene:At.16555 ProteinModelPortal:F4I5U6
SMR:F4I5U6 PRIDE:F4I5U6 EnsemblPlants:AT1G10640.1 GeneID:837607
KEGG:ath:AT1G10640 OMA:HSTTLAC Uniprot:F4I5U6
Length = 532
Score = 198 (74.8 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 40/111 (36%), Positives = 55/111 (49%)
Query: 27 FNVLDFXXXXXXXXXXSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSD 86
FNV+DF + AF AW C A M++P T+LV PI+F+GP ++
Sbjct: 119 FNVMDFGAKGDGKCDDTKAFEAAWVAACKIEAS--VMLVPPEYTYLVGPISFSGPYCQAN 176
Query: 87 ITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWW 137
I L G+IIAP W + W D + +++ G G IDGRG WW
Sbjct: 177 IVFQLDGTIIAPTDSKTWGKG-LMWWIDFTKLKGIKVQGKGVIDGRGSGWW 226
Score = 139 (54.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 46/168 (27%), Positives = 79/168 (47%)
Query: 62 TMVIPK-GKTF---LVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQS 117
T++ P KT+ L+ I FT K I + G +I G W++D S + D +
Sbjct: 184 TIIAPTDSKTWGKGLMWWIDFT---KLKGIKVQGKG-VIDGRGSGWWQQD--SPFIDSDT 237
Query: 118 VDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQ 177
+ ++ S + I +++++ +K PT L+F SPQ
Sbjct: 238 KLIVPLNNSANQNPP----MPIRSELDERMPSIK--PTALRFSGSFGVEVTGITIQNSPQ 291
Query: 178 THVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
H+ C+GV +++ +PG SPNTDGIH+Q + +V IH+ ++ G
Sbjct: 292 CHLKFDDCVGVVVHDIAVSSPGDSPNTDGIHLQNTKDVLIHSTTLACG 339
Score = 44 (20.5 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 205 DGIHIQAS-SNVYIHNAHISNG 225
D I IQ SNV++HN + G
Sbjct: 341 DCISIQTGCSNVFVHNVNCGPG 362
>TAIR|locus:2077442 [details] [associations]
symbol:AT3G07850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483
KO:K01213 GO:GO:0047911 EMBL:X72292 EMBL:AY056173 EMBL:AY091200
IPI:IPI00544320 PIR:S34200 RefSeq:NP_187442.1 UniGene:At.22234
ProteinModelPortal:P49063 SMR:P49063 STRING:P49063 PaxDb:P49063
PRIDE:P49063 ProMEX:P49063 EnsemblPlants:AT3G07850.1 GeneID:819976
KEGG:ath:AT3G07850 GeneFarm:575 TAIR:At3g07850 InParanoid:P49063
OMA:AIAIRIN PhylomeDB:P49063 ProtClustDB:CLSN2684911
Genevestigator:P49063 GermOnline:AT3G07850 Uniprot:P49063
Length = 444
Score = 215 (80.7 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 57/185 (30%), Positives = 86/185 (46%)
Query: 43 SMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPN 102
S AF AW C+A + T+ +PKG+ ++V + F GPCK +T+ L+G+ AP
Sbjct: 86 SAAFAAAWKEACAAGS---TITVPKGE-YMVESLEFKGPCKGP-VTLELNGNFKAPATVK 140
Query: 103 EWKEDDKSKWFDIQSVDSLQIDGSGTI-DGRGK-AWWDISCKINKKEGCVKLAPTVLKFD 160
K + W D +++ ++G+ I DG+G AW C K C L P ++F
Sbjct: 141 TTKPH--AGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGK--CNSL-PINIRFT 195
Query: 161 RCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNA 220
S H+ ++ C + + I AP S NTDGIHI S+ V + A
Sbjct: 196 GLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGA 255
Query: 221 HISNG 225
I G
Sbjct: 256 KIKTG 260
>TAIR|locus:2088252 [details] [associations]
symbol:AT3G14040 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GO:GO:0005576 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB019229
UniGene:At.22234 ProtClustDB:CLSN2684911 IPI:IPI00524959
RefSeq:NP_188020.1 UniGene:At.48657 ProteinModelPortal:Q9LVJ4
SMR:Q9LVJ4 STRING:Q9LVJ4 PRIDE:Q9LVJ4 EnsemblPlants:AT3G14040.1
GeneID:820618 KEGG:ath:AT3G14040 TAIR:At3g14040 InParanoid:Q9LVJ4
OMA:NICSASG PhylomeDB:Q9LVJ4 Genevestigator:Q9LVJ4 Uniprot:Q9LVJ4
Length = 445
Score = 213 (80.0 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 58/185 (31%), Positives = 86/185 (46%)
Query: 43 SMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPN 102
S AF AW C+A + T+ +PKG+ +LV + F GPCK +T+ L+G+ AP
Sbjct: 87 SAAFAAAWKEACAAGS---TITVPKGE-YLVESLEFKGPCKGP-VTLELNGNFKAPATVK 141
Query: 103 EWKEDDKSKWFDIQSVDSLQIDGSGTI-DGRGK-AWWDISCKINKKEGCVKLAPTVLKFD 160
K + W D +++ ++G+ I DG+G AW C K C L P ++F
Sbjct: 142 TTKPH--AGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGK--CNSL-PINIRFT 196
Query: 161 RCXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNA 220
S H+ ++ C + + I AP S NTDGIHI S+ V + A
Sbjct: 197 GLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGA 256
Query: 221 HISNG 225
I G
Sbjct: 257 KIKTG 261
>TAIR|locus:2127836 [details] [associations]
symbol:AT4G32380 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00542951 RefSeq:NP_194964.2 UniGene:At.50389
ProteinModelPortal:F4JUA6 SMR:F4JUA6 EnsemblPlants:AT4G32380.1
GeneID:829373 KEGG:ath:AT4G32380 OMA:INANFPI Uniprot:F4JUA6
Length = 354
Score = 160 (61.4 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 102 NEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDR 161
N+W + W + V L + GSG ++ G++WW S + + P ++F
Sbjct: 3 NDWGRNKLDCWLCFEKVTGLVLTGSGVLNTHGESWWS-SVALQSR-------PVAVRFFG 54
Query: 162 CXXXXXXXXXXXXSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAH 221
C SP+ H+T++ L + AP +SPNTDGI I S N+ I ++
Sbjct: 55 CQNILYNGLTQINSPRNHITILDSNNATLSNLHLIAPASSPNTDGIDISHSQNINIMSST 114
Query: 222 ISNG 225
I G
Sbjct: 115 IKTG 118
>TAIR|locus:2152980 [details] [associations]
symbol:AT5G41870 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB016871 HSSP:P26509 HOGENOM:HOG000238076 EMBL:BT015129
IPI:IPI00540800 RefSeq:NP_199002.1 UniGene:At.27978
UniGene:At.43191 ProteinModelPortal:Q9FJ27 SMR:Q9FJ27 PaxDb:Q9FJ27
PRIDE:Q9FJ27 EnsemblPlants:AT5G41870.1 GeneID:834192
KEGG:ath:AT5G41870 TAIR:At5g41870 InParanoid:Q9FJ27 OMA:PCAELAT
PhylomeDB:Q9FJ27 ProtClustDB:CLSN2686003 Genevestigator:Q9FJ27
Uniprot:Q9FJ27
Length = 449
Score = 128 (50.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 118 VDSLQIDG-SGTIDGRGKAWWDISCKINKKEGCVKLA-PTVLKFDRCXXXXXXXXXXXXS 175
++ + I G +GTIDG+G+ WW++ + G +K P +++F+ S
Sbjct: 149 LNDVVITGRNGTIDGQGEPWWNMW-----RHGTLKFTRPGLIEFNNSTNILVSHVVLQNS 203
Query: 176 PQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
P + + C V ++I AP S NTDGI +SSNV I +++IS G
Sbjct: 204 PFWTLHPVYCSNVVVHHVTILAPTDSYNTDGIDPDSSSNVCIEDSYISTG 253
>TAIR|locus:2128524 [details] [associations]
symbol:AT4G23820 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL161560 EMBL:AL035394 HOGENOM:HOG000238076
ProtClustDB:CLSN2686003 EMBL:AY062697 EMBL:AY128793 IPI:IPI00542449
PIR:T05614 RefSeq:NP_194113.1 UniGene:At.22227 UniGene:At.67753
ProteinModelPortal:Q9SUP5 PaxDb:Q9SUP5 PRIDE:Q9SUP5
EnsemblPlants:AT4G23820.1 GeneID:828482 KEGG:ath:AT4G23820
TAIR:At4g23820 InParanoid:Q9SUP5 OMA:PCTELTS PhylomeDB:Q9SUP5
Genevestigator:Q9SUP5 Uniprot:Q9SUP5
Length = 444
Score = 126 (49.4 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 126 SGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGC 185
+GTIDG+G+ WW++ K P +++F SP ++ + C
Sbjct: 153 NGTIDGQGEVWWNMWRSRTLKY----TRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYC 208
Query: 186 IGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
V ++I AP SPNTDGI +S NV I +++IS G
Sbjct: 209 SNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTG 248
>TAIR|locus:2101313 [details] [associations]
symbol:AT3G48950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132967 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076
ProtClustDB:CLSN2684221 EMBL:DQ056615 IPI:IPI00541492 PIR:T46135
RefSeq:NP_190464.1 UniGene:At.53842 ProteinModelPortal:Q9SMT3
SMR:Q9SMT3 PaxDb:Q9SMT3 PRIDE:Q9SMT3 EnsemblPlants:AT3G48950.1
GeneID:824056 KEGG:ath:AT3G48950 TAIR:At3g48950 InParanoid:Q9SMT3
OMA:ARRITMK PhylomeDB:Q9SMT3 Genevestigator:Q9SMT3 Uniprot:Q9SMT3
Length = 469
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 126 SGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXSPQTHVTVMGC 185
+GTI+G+G+ WWD K KK+ + P +++ SP ++ + C
Sbjct: 158 NGTINGQGQYWWD---KFKKKQFKIT-RPYLIEILFSKNIQISNITLIDSPSWNIHPVYC 213
Query: 186 IGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
V +++ AP T PNTDGI+ + +N I + +I +G
Sbjct: 214 NSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSG 253
>TAIR|locus:2098038 [details] [associations]
symbol:AT3G62110 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AF324992 EMBL:BT000724 IPI:IPI00542616
RefSeq:NP_567126.1 UniGene:At.19142 ProteinModelPortal:Q9FPJ2
SMR:Q9FPJ2 PaxDb:Q9FPJ2 PRIDE:Q9FPJ2 EnsemblPlants:AT3G62110.1
GeneID:825384 KEGG:ath:AT3G62110 TAIR:At3g62110 InParanoid:Q9FPJ2
OMA:YGEHPDE PhylomeDB:Q9FPJ2 ProtClustDB:CLSN2689318
ArrayExpress:Q9FPJ2 Genevestigator:Q9FPJ2 Uniprot:Q9FPJ2
Length = 471
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 34/112 (30%), Positives = 53/112 (47%)
Query: 116 QSVDSLQIDG-SGTIDGRGKAWWDISCKINKKEGCVKLA-PTVLKFDRCXXXXXXXXXXX 173
Q++ + I G +GTIDG+G WWD + G + P +++
Sbjct: 144 QNLTDVVITGENGTIDGQGTVWWDWF-----RNGELNYTRPHLVELMNSTGLIISNLTFL 198
Query: 174 XSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
SP ++ + C V L+I AP SPNTDG+ +S+NV I + +I G
Sbjct: 199 NSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTG 250
>TAIR|locus:2119156 [details] [associations]
symbol:AT4G33440 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:BT002785 EMBL:BT004354 IPI:IPI00528054
RefSeq:NP_195070.2 UniGene:At.43591 ProteinModelPortal:Q84K13
PaxDb:Q84K13 PRIDE:Q84K13 EnsemblPlants:AT4G33440.1 GeneID:829481
KEGG:ath:AT4G33440 TAIR:At4g33440 InParanoid:Q84K13 OMA:TRGHLIE
PhylomeDB:Q84K13 ProtClustDB:CLSN2690354 Genevestigator:Q84K13
Uniprot:Q84K13
Length = 475
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 117 SVDSLQIDG-SGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCXXXXXXXXXXXXS 175
++ ++ I G +GTIDG+GK WW++ N+ V +++ S
Sbjct: 174 NLTNVVITGENGTIDGQGKMWWELWW--NRT--LVHTRGHLIELKNSHNILISNLTLLNS 229
Query: 176 PQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
P + + C V ++I AP +PNTDGI +S+NV I + +I +G
Sbjct: 230 PFWTIHPVYCSNVVIRNMTILAPMNAPNTDGIDPDSSTNVCIEDCYIESG 279
>TAIR|locus:2117964 [details] [associations]
symbol:AT4G23500 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005618 GO:GO:0005576 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AL031326
EMBL:AL161559 EMBL:AY142497 EMBL:AK221568 IPI:IPI00537164
PIR:T05388 RefSeq:NP_194081.1 UniGene:At.32423
ProteinModelPortal:O81746 SMR:O81746 PaxDb:O81746 PRIDE:O81746
EnsemblPlants:AT4G23500.1 GeneID:828450 KEGG:ath:AT4G23500
TAIR:At4g23500 HOGENOM:HOG000238076 InParanoid:O81746 OMA:YGRGRDT
PhylomeDB:O81746 ProtClustDB:CLSN2916139 Genevestigator:O81746
Uniprot:O81746
Length = 495
Score = 113 (44.8 bits), Expect = 0.00040, P = 0.00040
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 126 SGTIDGRGKAWWDISCKINKKEGCVKLA-PTVLKFDRCXXXXXXXXXXXXSPQTHVTVMG 184
+GTIDG+G+ WW K K G +K P +++ SP H+ +
Sbjct: 180 NGTIDGQGEPWWG---KF--KRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVY 234
Query: 185 CIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225
+ L+I AP T PNTDGI+ + +N I + +I +G
Sbjct: 235 SSNIYIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSG 275
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 226 204 0.00094 111 3 11 22 0.48 32
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 60
No. of states in DFA: 614 (65 KB)
Total size of DFA: 192 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.35u 0.09s 16.44t Elapsed: 00:00:01
Total cpu time: 16.36u 0.09s 16.45t Elapsed: 00:00:01
Start: Sat May 11 07:25:47 2013 End: Sat May 11 07:25:48 2013