Query 047411
Match_columns 226
No_of_seqs 199 out of 1293
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 19:07:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047411.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047411hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 1.5E-45 5.3E-50 331.2 17.0 197 20-226 21-260 (448)
2 1bhe_A PEHA, polygalacturonase 100.0 2.7E-39 9.2E-44 285.7 19.9 189 22-226 10-223 (376)
3 2uvf_A Exopolygalacturonase; G 100.0 3.6E-39 1.2E-43 299.9 18.5 193 22-226 152-402 (608)
4 1rmg_A Rgase A, rhamnogalactur 100.0 8E-39 2.8E-43 286.1 18.3 180 22-226 16-197 (422)
5 2x6w_A Tail spike protein; vir 100.0 9.1E-37 3.1E-41 277.8 8.2 171 24-226 49-244 (600)
6 1czf_A Polygalacturonase II; b 100.0 3.5E-35 1.2E-39 257.7 14.5 169 24-226 27-201 (362)
7 2iq7_A Endopolygalacturonase; 100.0 1.2E-33 4E-38 246.3 14.5 164 41-226 6-176 (339)
8 1hg8_A Endopolygalacturonase; 100.0 4.4E-33 1.5E-37 243.5 16.5 166 42-226 7-188 (349)
9 1nhc_A Polygalacturonase I; be 100.0 1.7E-33 5.8E-38 245.1 13.6 164 40-226 5-175 (336)
10 1ia5_A Polygalacturonase; glyc 100.0 4.3E-33 1.5E-37 242.7 15.8 164 41-226 10-180 (339)
11 1k5c_A Endopolygalacturonase; 100.0 1.3E-33 4.3E-38 245.5 9.9 159 43-226 8-173 (335)
12 1h80_A IOTA-carrageenase; hydr 100.0 1E-29 3.5E-34 228.6 19.2 167 23-223 18-210 (464)
13 3gq8_A Preneck appendage prote 100.0 1.3E-29 4.3E-34 231.9 15.2 176 23-223 19-216 (609)
14 3gqn_A Preneck appendage prote 100.0 4E-29 1.4E-33 232.1 15.0 176 23-223 19-216 (772)
15 2vbk_A Tailspike-protein; vira 100.0 4.7E-29 1.6E-33 217.8 11.3 172 24-226 49-232 (514)
16 1x0c_A Isopullulanase; glycosi 99.9 4.3E-28 1.5E-32 222.5 4.6 174 27-226 143-357 (549)
17 1ogo_X Dextranase; hydrolase, 99.9 2.1E-26 7.2E-31 211.5 12.3 142 58-226 230-395 (574)
18 2pyg_A Poly(beta-D-mannuronate 99.9 2.3E-25 8E-30 196.0 12.9 174 26-225 2-217 (377)
19 3eqn_A Glucan 1,3-beta-glucosi 99.8 2.3E-20 7.9E-25 173.5 10.1 162 24-226 47-223 (758)
20 2inu_A Insulin fructotransfera 99.5 6.2E-14 2.1E-18 122.6 13.3 181 20-222 8-249 (410)
21 3eqn_A Glucan 1,3-beta-glucosi 99.3 1.5E-11 5E-16 114.8 14.4 94 24-130 398-498 (758)
22 1dbg_A Chondroitinase B; beta 99.0 4.4E-09 1.5E-13 95.5 12.1 152 43-224 31-207 (506)
23 1ogo_X Dextranase; hydrolase, 98.7 1E-07 3.5E-12 87.7 11.2 133 60-225 264-415 (574)
24 3uw0_A Pectinesterase; right-h 98.6 2.3E-07 7.9E-12 80.9 11.8 63 156-224 116-199 (364)
25 2iq7_A Endopolygalacturonase; 98.6 2.5E-07 8.5E-12 80.1 11.1 113 86-225 69-197 (339)
26 1hg8_A Endopolygalacturonase; 98.6 7.4E-07 2.5E-11 77.4 12.6 113 86-225 70-209 (349)
27 1bhe_A PEHA, polygalacturonase 98.6 6.3E-07 2.1E-11 78.6 12.3 114 86-225 110-250 (376)
28 1ru4_A Pectate lyase, PEL9A; p 98.5 2.7E-06 9.2E-11 75.2 15.7 168 21-222 11-203 (400)
29 1ia5_A Polygalacturonase; glyc 98.5 6.9E-07 2.3E-11 77.3 11.0 113 86-225 73-201 (339)
30 1nhc_A Polygalacturonase I; be 98.5 1.2E-06 4E-11 75.8 11.1 112 86-225 69-196 (336)
31 3jur_A EXO-poly-alpha-D-galact 98.4 6.7E-07 2.3E-11 80.2 8.7 92 111-223 191-291 (448)
32 1x0c_A Isopullulanase; glycosi 98.4 1.5E-06 5.2E-11 79.7 11.0 132 60-223 222-375 (549)
33 2uvf_A Exopolygalacturonase; G 98.4 7.1E-07 2.4E-11 82.9 8.0 95 111-226 332-435 (608)
34 1czf_A Polygalacturonase II; b 98.3 1.9E-06 6.6E-11 75.1 9.1 112 86-225 96-222 (362)
35 1xg2_A Pectinesterase 1; prote 98.3 3.6E-06 1.2E-10 72.0 9.9 147 42-223 14-169 (317)
36 1gq8_A Pectinesterase; hydrola 98.3 7.8E-06 2.7E-10 70.0 11.9 147 42-223 18-173 (319)
37 1rmg_A Rgase A, rhamnogalactur 98.3 5.8E-06 2E-10 73.5 11.3 88 111-225 128-219 (422)
38 1pcl_A Pectate lyase E; lyase 98.2 3.2E-05 1.1E-09 67.2 14.1 69 156-224 97-194 (355)
39 1pxz_A Major pollen allergen J 98.2 1.7E-05 5.7E-10 68.8 12.2 168 23-222 37-222 (346)
40 1k5c_A Endopolygalacturonase; 98.2 4.2E-06 1.4E-10 72.3 8.4 111 86-225 67-194 (335)
41 3zsc_A Pectate trisaccharide-l 98.1 3.6E-05 1.2E-09 66.4 12.8 144 46-224 38-193 (340)
42 2nsp_A Pectinesterase A; micha 98.0 2.9E-05 9.8E-10 67.2 9.8 61 156-223 90-171 (342)
43 3vmv_A Pectate lyase; polysacc 98.0 7.6E-05 2.6E-09 64.0 12.2 69 156-224 96-174 (326)
44 2qy1_A Pectate lyase II; GAG l 97.9 0.00011 3.8E-09 63.2 11.3 69 156-224 87-173 (330)
45 2x3h_A K5 lyase, K5A lyase; ba 97.9 0.00041 1.4E-08 58.5 14.2 158 24-223 62-234 (542)
46 1pe9_A Pectate lyase A; parall 97.8 8.6E-05 2.9E-09 64.6 9.0 69 156-224 104-205 (361)
47 1pcl_A Pectate lyase E; lyase 97.7 0.0037 1.3E-07 54.2 17.7 154 41-224 31-226 (355)
48 1idk_A Pectin lyase A; signal, 97.6 0.00084 2.9E-08 58.3 13.2 62 157-223 126-197 (359)
49 3gqn_A Preneck appendage prote 97.6 0.00036 1.2E-08 65.6 11.3 109 111-225 135-246 (772)
50 1vbl_A Pectate lyase 47; PL 47 97.6 0.00016 5.4E-09 64.0 8.3 69 156-224 149-250 (416)
51 3gq8_A Preneck appendage prote 97.6 0.00046 1.6E-08 63.5 11.1 110 111-225 135-246 (609)
52 1qcx_A Pectin lyase B; beta-he 97.6 0.0018 6.1E-08 56.2 14.2 62 157-223 126-197 (359)
53 1idk_A Pectin lyase A; signal, 97.6 0.00013 4.3E-09 63.5 6.8 70 155-224 154-232 (359)
54 1qcx_A Pectin lyase B; beta-he 97.6 0.00016 5.3E-09 62.9 7.3 106 119-224 108-232 (359)
55 1h80_A IOTA-carrageenase; hydr 97.4 0.0049 1.7E-07 55.3 15.2 118 86-225 110-245 (464)
56 2pyg_A Poly(beta-D-mannuronate 97.3 0.0011 3.7E-08 57.5 10.0 65 155-224 173-246 (377)
57 3zsc_A Pectate trisaccharide-l 97.3 0.01 3.5E-07 51.0 15.8 101 86-224 47-160 (340)
58 1air_A Pectate lyase C, PELC; 97.3 0.001 3.5E-08 57.6 8.8 69 156-224 104-187 (353)
59 2o04_A Pectate lyase, PL; hexa 97.2 0.00079 2.7E-08 59.3 7.1 68 156-224 144-244 (399)
60 1pxz_A Major pollen allergen J 97.0 0.002 6.8E-08 55.7 7.9 104 115-224 64-194 (346)
61 2qy1_A Pectate lyase II; GAG l 96.8 0.0052 1.8E-07 52.7 8.6 65 157-224 66-138 (330)
62 1air_A Pectate lyase C, PELC; 96.7 0.0036 1.2E-07 54.2 7.2 68 156-224 81-150 (353)
63 1vbl_A Pectate lyase 47; PL 47 96.7 0.0059 2E-07 54.0 8.6 61 162-225 131-210 (416)
64 2o04_A Pectate lyase, PL; hexa 96.2 0.015 5E-07 51.1 8.0 60 162-225 126-204 (399)
65 1pe9_A Pectate lyase A; parall 96.1 0.022 7.7E-07 49.3 8.9 60 163-225 87-165 (361)
66 3grh_A YBHC, acyl-COA thioeste 95.8 0.12 4E-06 45.6 12.0 39 161-200 199-247 (422)
67 3vmv_A Pectate lyase; polysacc 95.7 0.018 6.1E-07 49.2 6.3 44 179-223 96-140 (326)
68 2inu_A Insulin fructotransfera 95.7 0.025 8.6E-07 49.5 7.1 106 111-223 185-297 (410)
69 1ru4_A Pectate lyase, PEL9A; p 95.5 0.019 6.6E-07 50.4 6.0 62 156-223 109-171 (400)
70 3ju4_A Endo-N-acetylneuraminid 88.9 0.14 4.7E-06 45.2 1.5 38 32-74 4-41 (670)
71 1dbg_A Chondroitinase B; beta 79.6 4.4 0.00015 36.5 7.0 66 157-224 246-311 (506)
72 1gq8_A Pectinesterase; hydrola 78.3 29 0.00099 29.1 12.8 62 155-224 87-154 (319)
73 2vbk_A Tailspike-protein; vira 76.2 3.7 0.00013 36.4 5.3 33 157-198 198-231 (514)
74 1ee6_A Pectate lyase; parallel 74.5 15 0.00051 28.7 7.8 60 153-220 40-99 (197)
75 3t9g_A Pectate lyase; PL3, par 71.1 15 0.00051 28.6 7.1 90 120-220 14-103 (196)
76 2x6w_A Tail spike protein; vir 65.0 3.7 0.00013 37.7 2.9 60 156-221 143-218 (600)
77 1xg2_A Pectinesterase 1; prote 62.3 68 0.0023 26.8 13.0 62 155-224 83-150 (317)
78 3t9g_A Pectate lyase; PL3, par 54.2 75 0.0025 24.7 10.5 19 156-174 112-130 (196)
79 3b4n_A Endo-pectate lyase; pec 48.6 1.2E+02 0.0042 25.6 9.5 77 120-210 124-200 (344)
80 1ee6_A Pectate lyase; parallel 42.6 30 0.001 27.0 4.3 33 185-223 47-79 (197)
81 1j5p_A Aspartate dehydrogenase 32.6 50 0.0017 26.7 4.4 37 24-68 84-120 (253)
82 1l0s_A Thermal hysteresis prot 29.0 76 0.0026 20.8 3.9 33 162-197 17-49 (90)
83 1fjk_A Cardiac phospholamban; 26.9 38 0.0013 19.7 2.0 15 4-18 34-48 (52)
84 3bh7_B Protein XRP2; protein-p 25.8 1.2E+02 0.004 25.8 5.7 12 156-167 82-93 (352)
85 3bh7_B Protein XRP2; protein-p 25.5 1.5E+02 0.0052 25.1 6.3 12 157-168 102-113 (352)
86 1tvg_A LOC51668 protein; cell 25.1 1.3E+02 0.0045 22.0 5.3 36 128-173 40-75 (153)
87 2b0r_A Possible adenyl cyclase 21.5 2.7E+02 0.0094 21.6 6.5 28 156-183 93-126 (202)
88 2yc2_A IFT25, intraflagellar t 20.7 98 0.0033 22.1 3.7 36 128-173 32-67 (139)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=1.5e-45 Score=331.18 Aligned_cols=197 Identities=29% Similarity=0.493 Sum_probs=172.3
Q ss_pred cccccceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCCCeEEEeeeeeeCCCcCccEEEEEeeEEEeeC
Q 047411 20 IRINADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPN 99 (226)
Q Consensus 20 ~~~~~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~~l~l~~~~ks~~v~l~~~g~l~~~~ 99 (226)
+...+++++|++|||++||.+|||+|||+||+ +|++.| |++|+||+| +|+++++.| || +++|+++|+|++++
T Consensus 21 p~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~-~c~~~g-gg~v~vP~G-~yl~~~l~l----~s-~v~l~l~gtL~~s~ 92 (448)
T 3jur_A 21 PQIPDREVNLLDFGARGDGRTDCSESFKRAIE-ELSKQG-GGRLIVPEG-VFLTGPIHL----KS-NIELHVKGTIKFIP 92 (448)
T ss_dssp CCCCSCEEEGGGGTCCCEEEEECHHHHHHHHH-HHHHHT-CEEEEECSS-EEEESCEEC----CT-TEEEEESSEEEECC
T ss_pred CCCCCcEEEEEecccCCCCCeecHHHHHHHHH-hhhhcC-CeEEEECCC-cEEEeeeEe----CC-CcEEEEEEEEEecC
Confidence 44457899999999999999999999999995 677656 889999999 999999999 68 99999999999999
Q ss_pred CCCCc-CC----------CCCcceEEEeCccceEEEeceEEeCCC--cccccccccccc---------------------
Q 047411 100 GPNEW-KE----------DDKSKWFDIQSVDSLQIDGSGTIDGRG--KAWWDISCKINK--------------------- 145 (226)
Q Consensus 100 ~~~~~-~~----------~~~~~~i~~~~~~nv~I~G~G~idG~G--~~~~~~~~~~~~--------------------- 145 (226)
++++| +. .+..+||++.+++||+|+|.|+|||+| +.||......+.
T Consensus 93 d~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 172 (448)
T 3jur_A 93 DPERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAE 172 (448)
T ss_dssp CGGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHH
T ss_pred CHHHhCcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhc
Confidence 99888 31 023479999999999999999999999 899974321000
Q ss_pred ---------cCCcccCCceEEEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEE
Q 047411 146 ---------KEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVY 216 (226)
Q Consensus 146 ---------~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~ 216 (226)
..+....||++|.|.+|+|++|+|++++|||+|++++..|+|++|++++|.++ ++|+||||+.+|+||+
T Consensus 173 ~~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~ 250 (448)
T 3jur_A 173 RGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYML 250 (448)
T ss_dssp HTCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEE
T ss_pred ccCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEE
Confidence 00111479999999999999999999999999999999999999999999997 6899999999999999
Q ss_pred EEeeEEecCC
Q 047411 217 IHNAHISNGT 226 (226)
Q Consensus 217 I~n~~i~~gD 226 (226)
|+||+|++||
T Consensus 251 I~n~~i~~gD 260 (448)
T 3jur_A 251 IEKCRFDTGD 260 (448)
T ss_dssp EESCEEEESS
T ss_pred EEeeEEEeCC
Confidence 9999999998
No 2
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=2.7e-39 Score=285.69 Aligned_cols=189 Identities=24% Similarity=0.457 Sum_probs=161.3
Q ss_pred cccceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecC---CCeEEEeeeeeeCCCcCccEEEEEee--EEE
Q 047411 22 INADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPK---GKTFLVHPITFTGPCKSSDITIMLSG--SII 96 (226)
Q Consensus 22 ~~~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~---G~tY~~~~l~l~~~~ks~~v~l~~~g--~l~ 96 (226)
....+|+|.+|| .+|||+|||+|| ++|++ |++|+||+ | +|+++++.| || +++|++++ +|+
T Consensus 10 ~~p~~~~v~~~G-----~~~dT~aiq~Ai-~ac~~---Gg~v~~~~~~~g-~yl~g~i~l----~s-~vtL~l~~Ga~L~ 74 (376)
T 1bhe_A 10 KTPSSCTTLKAD-----SSTATSTIQKAL-NNCDQ---GKAVRLSAGSTS-VFLSGPLSL----PS-GVSLLIDKGVTLR 74 (376)
T ss_dssp CCCCEEEEEECC-----SSBCHHHHHHHH-TTCCT---TCEEEEECSSSS-EEEESCEEC----CT-TCEEEECTTCEEE
T ss_pred CCCCeEEECCCC-----CCccHHHHHHHH-HHhcc---CCcEEEECCCCc-eEEEeEEEE----CC-CCEEEECCCeEEE
Confidence 345579999986 479999999999 57886 45676664 8 999999999 68 99999994 999
Q ss_pred eeCCCCCcCCC------------CCcceEEEeCccceEEEeceEEeCCC--------cccccccccccccCCcccCCceE
Q 047411 97 APNGPNEWKED------------DKSKWFDIQSVDSLQIDGSGTIDGRG--------KAWWDISCKINKKEGCVKLAPTV 156 (226)
Q Consensus 97 ~~~~~~~~~~~------------~~~~~i~~~~~~nv~I~G~G~idG~G--------~~~~~~~~~~~~~~~~~~~rp~~ 156 (226)
+++++.+|+.. ...+||++.+++||+|+|.|+|||+| +.||....+....... ..||++
T Consensus 75 ~s~~~~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~-~~rp~~ 153 (376)
T 1bhe_A 75 AVNNAKSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLK-QNTPRL 153 (376)
T ss_dssp ECSCSGGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCE-ECCCCS
T ss_pred eCCCHHHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCcc-CCCCeE
Confidence 99998888631 23579999999999999999999999 5788742210000111 469999
Q ss_pred EEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEecCC
Q 047411 157 LKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 157 i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
|.|.+|+|++|+|++++|||+||+++..|++++|++++|.+|..++|+||||+++|+||+|+||+|.+||
T Consensus 154 i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gD 223 (376)
T 1bhe_A 154 IQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGD 223 (376)
T ss_dssp EEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSS
T ss_pred EEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCC
Confidence 9999999999999999999999999999999999999999998889999999999999999999999998
No 3
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=3.6e-39 Score=299.92 Aligned_cols=193 Identities=22% Similarity=0.325 Sum_probs=164.4
Q ss_pred cccceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCCCeEEEeeeeeeCCCcCccEEEEEe--eEEEeeC
Q 047411 22 INADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLS--GSIIAPN 99 (226)
Q Consensus 22 ~~~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~~l~l~~~~ks~~v~l~~~--g~l~~~~ 99 (226)
...+.++|++|||++||.+|||+|||+|| ++|+. |++|+||+| +|+++++.| || +++|+++ |+|+++.
T Consensus 152 ~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai-~~c~~---g~~v~vP~G-~y~~g~i~l----ks-~v~L~l~~gatL~~s~ 221 (608)
T 2uvf_A 152 AKPQIVNVRDFGAIDDGKTLNTKAIQQAI-DSCKP---GCRVEIPAG-TYKSGALWL----KS-DMTLNLQAGAILLGSE 221 (608)
T ss_dssp CCCCEEEGGGGTCCSSSSCCCHHHHHHHH-HTCCT---TEEEEECSE-EEEECCEEC----CS-SEEEEECTTEEEEECS
T ss_pred cCCCEEecccccccCCCCccCHHHHHHHH-HhcCC---CCEEEECCC-ceEecceec----cC-ceEEEecCCcEEEecC
Confidence 34678999999999999999999999999 57876 679999999 999999999 68 9999995 8999999
Q ss_pred CCCCcCCC----C------CcceEEEeC--------ccceEEEeceEEeCCCccccccccc-ccc---------------
Q 047411 100 GPNEWKED----D------KSKWFDIQS--------VDSLQIDGSGTIDGRGKAWWDISCK-INK--------------- 145 (226)
Q Consensus 100 ~~~~~~~~----~------~~~~i~~~~--------~~nv~I~G~G~idG~G~~~~~~~~~-~~~--------------- 145 (226)
+..+|+.. . ..++|++.+ ++||+|+|.|+|||+|..||..... .+.
T Consensus 222 d~~~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~~~ 301 (608)
T 2uvf_A 222 NPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNSKV 301 (608)
T ss_dssp CGGGSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTTTH
T ss_pred CHHHCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCcccccccccccccccccccccccccccccc
Confidence 98888620 0 125888887 6999999999999999988742100 000
Q ss_pred -----------------cCC-----cccCCceEEEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEECCCCCCC
Q 047411 146 -----------------KEG-----CVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQAPGTSPN 203 (226)
Q Consensus 146 -----------------~~~-----~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~~~~~~n 203 (226)
..+ + ..||++|.|.+|+|++|+|++++|+|+|++++..|++++|+++++.. .+++|
T Consensus 302 ~~~~~~~~~~~~~~~~~g~~~~~~~~-~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~N 379 (608)
T 2uvf_A 302 HEDGILAKNQVEKAVSDGMDLKNAYG-QRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANN 379 (608)
T ss_dssp HHHBSHHHHHHHHHHHTTCCHHHHHH-HSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTT
T ss_pred cccccccccccccccccccccccccc-cCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCC
Confidence 000 0 24999999999999999999999999999999999999999999865 56799
Q ss_pred CCeEEecCeecEEEEeeEEecCC
Q 047411 204 TDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 204 tDGi~~~~s~~v~I~n~~i~~gD 226 (226)
+||||+++|+||+|+||+|++||
T Consensus 380 tDGidi~~s~nV~I~n~~i~~gD 402 (608)
T 2uvf_A 380 GDGIEFGNSQNVMVFNNFFDTGD 402 (608)
T ss_dssp CCSEEEESCEEEEEESCEEECSS
T ss_pred CCeEEecCCceEEEEeeEEecCC
Confidence 99999999999999999999998
No 4
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=8e-39 Score=286.11 Aligned_cols=180 Identities=23% Similarity=0.452 Sum_probs=155.0
Q ss_pred cccceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCCCeEEEe-eeeeeCCCcCccEEEEEeeEEEeeCC
Q 047411 22 INADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVH-PITFTGPCKSSDITIMLSGSIIAPNG 100 (226)
Q Consensus 22 ~~~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~-~l~l~~~~ks~~v~l~~~g~l~~~~~ 100 (226)
+..+.|+|++|||++||.+|||+|||+||+ +|+. |++|+||+| +|+++ +|.|.++ + +++|+++|+++++.+
T Consensus 16 ~~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~~---g~~V~vP~G-~Yli~~~l~l~g~--s-~v~l~l~G~~l~~~~ 87 (422)
T 1rmg_A 16 GATKTCNILSYGAVADNSTDVGPAITSAWA-ACKS---GGLVYIPSG-NYALNTWVTLTGG--S-ATAIQLDGIIYRTGT 87 (422)
T ss_dssp HHHCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHTB---TCEEEECSS-EEEECSCEEEESC--E-EEEEEECSEEEECCC
T ss_pred cCCcEEEeeeccccCCCCcccHHHHHHHHH-HCCC---CCEEEECCC-eEEeCCceeecCC--C-eEEEEEcCcEEcccC
Confidence 346789999999999999999999999995 7864 789999999 99998 4999763 6 999999998876543
Q ss_pred CC-CcCCCCCcceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCceE
Q 047411 101 PN-EWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTH 179 (226)
Q Consensus 101 ~~-~~~~~~~~~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~ 179 (226)
.. .| -.++...++++++|+|.|+|||+|+.||.. . ..||+++.|.+|+|++|+|++++|+|+|+
T Consensus 88 ~~~~~-----~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~--------~--~~rp~~i~~~~~~nv~I~~iti~nsp~~~ 152 (422)
T 1rmg_A 88 ASGNM-----IAVTDTTDFELFSSTSKGAVQGFGYVYHAE--------G--TYGARILRLTDVTHFSVHDIILVDAPAFH 152 (422)
T ss_dssp CSSEE-----EEEEEEEEEEEECSSSCCEEECCTHHHHTT--------T--CCCCEEEEEEEEEEEEEEEEEEECCSSCS
T ss_pred CCCce-----EEEEecCceeEEeeccCEEEECCcchhhcC--------C--CCCceEEEEcccceEEEECeEEECCCceE
Confidence 21 11 123445666777788999999999999962 1 34999999999999999999999999999
Q ss_pred EEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEecCC
Q 047411 180 VTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 180 i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
+++..|+|++|+|++|.+ .+++|+||||+++ +||+|+||+|++||
T Consensus 153 i~i~~~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gD 197 (422)
T 1rmg_A 153 FTMDTCSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKD 197 (422)
T ss_dssp EEEEEEEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSS
T ss_pred EEEeCcCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCC
Confidence 999999999999999999 4568999999999 99999999999998
No 5
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=9.1e-37 Score=277.79 Aligned_cols=171 Identities=18% Similarity=0.133 Sum_probs=149.8
Q ss_pred cceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCCCeEEE------------eeeeeeCCCcCccEEEEE
Q 047411 24 ADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLV------------HPITFTGPCKSSDITIML 91 (226)
Q Consensus 24 ~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~------------~~l~l~~~~ks~~v~l~~ 91 (226)
.++++|+||||++| ||+|||+|| ++|++.+ |++|+||+|++|++ ++|.| || +++|++
T Consensus 49 ~~~~nV~dfGA~gD----dT~AIqkAI-daCs~~G-GgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L----kS-nVtL~L 117 (600)
T 2x6w_A 49 DPSGNVIQPGPNVD----SRQYLQAAI-DYVSSNG-GGTITIPAGYTWYLGSYGVGGIAGHSGIIQL----RS-NVNLNI 117 (600)
T ss_dssp CTTSCBCCCCTTCC----CHHHHHHHH-HHHHHTT-CEEEEECTTCEEEECSCCCGGGGGGTEEEEC----CT-TEEEEE
T ss_pred CcEEeeecCCCCcc----CHHHHHHHH-HHhhhcC-CCEEEECCCCEEEecccccccccccccceEE----cC-ceEEee
Confidence 56899999999998 999999999 5787777 88999999988999 89999 68 999999
Q ss_pred eeEEEeeCCCCCcCCC-----CCcceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEE
Q 047411 92 SGSIIAPNGPNEWKED-----DKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLR 166 (226)
Q Consensus 92 ~g~l~~~~~~~~~~~~-----~~~~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~ 166 (226)
+|+|++++++++|+.. .-.++|.+.+++||+|+|.|+|||+|+.||.... .+ ..||. +.|.+|+
T Consensus 118 dGtL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~-----~~--~~RP~-l~f~~c~--- 186 (600)
T 2x6w_A 118 EGRIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQ-----LR--NGVAF-GRSYNCS--- 186 (600)
T ss_dssp CSEEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTC-----CE--EEEEC-CSEEEEE---
T ss_pred ecEEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccc-----cC--CCCCE-EEEeeeE---
Confidence 9999999999888631 1134578889999999999999999999997211 11 25788 8899988
Q ss_pred EeeeEEeCC-CceEEEE---eCeeeEEEEeEE----EECCCCCCCCCeEEecCeecEEEEeeEEecCC
Q 047411 167 MNNMNFINS-PQTHVTV---MGCIGVEFGFLS----IQAPGTSPNTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 167 i~~i~i~ns-~~~~i~~---~~s~~v~i~~~~----i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
|+|++++|| |+|++++ ..|+||+|+|++ |.+ ++||||| |+|+||+|.+||
T Consensus 187 I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGD 244 (600)
T 2x6w_A 187 VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVE 244 (600)
T ss_dssp EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEE
T ss_pred EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCC
Confidence 999999999 9999999 999999999999 776 6999999 999999999998
No 6
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=3.5e-35 Score=257.75 Aligned_cols=169 Identities=21% Similarity=0.357 Sum_probs=143.9
Q ss_pred cceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCCCeEEEeeeeeeCCCcCccEEEEEeeEEEeeCCCCC
Q 047411 24 ADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNE 103 (226)
Q Consensus 24 ~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~~l~l~~~~ks~~v~l~~~g~l~~~~~~~~ 103 (226)
.++|+|++ ++|||+|+ ++|+..+ +++|+||+| +|+. + +.+ ++ +++|+++|++.+. ...
T Consensus 27 ~~~Ctv~~-----------~~aiq~ai-~~c~~~~-g~~v~vP~G-~~l~--l--~~l-~~-~~~l~~~g~~~~~--~~~ 84 (362)
T 1czf_A 27 RDSCTFTT-----------AAAAKAGK-AKCSTIT-LNNIEVPAG-TTLD--L--TGL-TS-GTKVIFEGTTTFQ--YEE 84 (362)
T ss_dssp -CEEEESS-----------HHHHHHHG-GGCSEEE-EESCEECTT-CCEE--E--CSC-CT-TCEEEEESEEEEC--CCC
T ss_pred CCEEEECC-----------HHHHHHHH-HHhhccC-CCEEEECCC-EEEE--e--ecc-CC-CeEEEEeCcEEec--ccc
Confidence 35688865 67999999 6788766 789999999 8863 2 222 56 8999999988763 356
Q ss_pred cCCCCCcceEEEeCccceEEEe--ceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCceEEE
Q 047411 104 WKEDDKSKWFDIQSVDSLQIDG--SGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVT 181 (226)
Q Consensus 104 ~~~~~~~~~i~~~~~~nv~I~G--~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~ 181 (226)
|. ++||.+.+ +||+|+| .|+|||+|+.||+.... ++ ..||+++.|.+|+|++|+|++++|+|+|+++
T Consensus 85 w~----g~~i~~~~-~nv~I~G~~~g~IdG~G~~~w~~~~~-----~~-~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~ 153 (362)
T 1czf_A 85 WA----GPLISMSG-EHITVTGASGHLINCDGARWWDGKGT-----SG-KKKPKFFYAHGLDSSSITGLNIKNTPLMAFS 153 (362)
T ss_dssp SC----CCSEEEEE-ESCEEEECTTCEEECCGGGTCCSCTT-----SS-SCCCCCEEEEEEETEEEESCEEECCSSCCEE
T ss_pred CC----CcEEEEeC-ccEEEEcCCCcEEECCCchhhcccCC-----CC-CCCCeEEEEeecccEEEEEEEEecCCccEEE
Confidence 76 58999865 9999999 69999999999984322 12 6899999999999999999999999999999
Q ss_pred EeCeeeEEEEeEEEECCCC----CCCCCeEEecCeecEEEEeeEEecCC
Q 047411 182 VMGCIGVEFGFLSIQAPGT----SPNTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 182 ~~~s~~v~i~~~~i~~~~~----~~ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
+. |+|++|+|++|.++.+ ++|+||||+++|+||+|+||+|++||
T Consensus 154 i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gD 201 (362)
T 1czf_A 154 VQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQD 201 (362)
T ss_dssp EE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSS
T ss_pred Ee-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCC
Confidence 99 9999999999999743 79999999999999999999999998
No 7
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=1.2e-33 Score=246.32 Aligned_cols=164 Identities=24% Similarity=0.447 Sum_probs=142.0
Q ss_pred chHHHHHHHHHHhcccCCCCCEEEecCCCeEEEeee-eeeCCCcCccEEEEEeeEEEeeCCCCCcCCCCCcceEEEeCcc
Q 047411 41 DDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPI-TFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVD 119 (226)
Q Consensus 41 ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~~l-~l~~~~ks~~v~l~~~g~l~~~~~~~~~~~~~~~~~i~~~~~~ 119 (226)
.||+|||+|| ++|++.+ +++|+||+| +|+. + .| ++ +++|+++|.+.+. ...|. ++|+.+.+ +
T Consensus 6 ~dt~aiq~ai-~~c~~~~-g~~v~vP~G-~~~~--l~~l----~~-~~~l~~~g~~~~~--~~~w~----g~~i~~~~-~ 68 (339)
T 2iq7_A 6 TDAAAAIKGK-ASCTSII-LNGIVVPAG-TTLD--MTGL----KS-GTTVTFQGKTTFG--YKEWE----GPLISFSG-T 68 (339)
T ss_dssp SCHHHHHHHG-GGCSEEE-EESCEECTT-CCEE--ECSC----CT-TCEEEEESEEEEC--CCCSC----CCSEEEEE-E
T ss_pred CCHHHHHHHH-HHhhccC-CCeEEECCC-EEEE--eecc----CC-CeEEEEeCcEEcc--ccccc----CcEEEEEc-c
Confidence 4799999999 6788766 789999999 8874 3 33 56 8999999988763 35676 57898876 9
Q ss_pred ceEEEec--eEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEEC
Q 047411 120 SLQIDGS--GTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQA 197 (226)
Q Consensus 120 nv~I~G~--G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~ 197 (226)
||+|+|. |+|||+|+.||+...+ . .+ ..||+++.|.+|+|++|+|++++|+|+|++++..|++++|++++|.+
T Consensus 69 nv~I~G~~gG~IdG~G~~~w~~~~~---~-~~-~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~ 143 (339)
T 2iq7_A 69 NININGASGHSIDCQGSRWWDSKGS---N-GG-KTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDN 143 (339)
T ss_dssp SCEEEECTTCEEECCGGGTCCSCGG---G-SS-SCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEEC
T ss_pred cEEEEcCCCCEEECCcccccccccc---c-CC-CCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEEC
Confidence 9999997 7999999999984322 1 12 57999999999999999999999999999999999999999999999
Q ss_pred CCC----CCCCCeEEecCeecEEEEeeEEecCC
Q 047411 198 PGT----SPNTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 198 ~~~----~~ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
+.. ++|+||||+++|+||+|+||+|++||
T Consensus 144 ~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gD 176 (339)
T 2iq7_A 144 SAGDSAGGHNTDAFDVGSSTGVYISGANVKNQD 176 (339)
T ss_dssp GGGGGTTCCSCCSEEEESCEEEEEESCEEECSS
T ss_pred CccccccCCCCCcEEEcCcceEEEEecEEecCC
Confidence 753 79999999999999999999999997
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=4.4e-33 Score=243.50 Aligned_cols=166 Identities=22% Similarity=0.355 Sum_probs=139.0
Q ss_pred hHHHHHHHHHHhcccCCCCCEEEecCCCeEEEeeeeeeCCCcCccEEEEEeeEEEeeCCCCCcCCCCCcceEEEeCccce
Q 047411 42 DSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSL 121 (226)
Q Consensus 42 dt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~~l~l~~~~ks~~v~l~~~g~l~~~~~~~~~~~~~~~~~i~~~~~~nv 121 (226)
||+|||+|+ ++|++.+ +++|+||+| +|+. + +.+ ++ +++|+++|++++. ...|. .++||.+.+ +||
T Consensus 7 ~t~aiq~ai-~~c~~~g-g~~v~vP~G-~~l~--l--~~l-~~-~~~l~~~g~~~~~--~~~w~---~g~~i~~~~-~ni 71 (349)
T 1hg8_A 7 EYSGLATAV-SSCKNIV-LNGFQVPTG-KQLD--L--SSL-QN-DSTVTFKGTTTFA--TTADN---DFNPIVISG-SNI 71 (349)
T ss_dssp SGGGHHHHH-HHCSEEE-ECCCEECTT-CCEE--E--TTC-CT-TCEEEECSEEEEC--CCCCT---TCCSEEEEE-ESC
T ss_pred CHHHHHHHH-HhccccC-CCEEEECCC-EEEE--e--ecc-CC-CeEEEEcCceecc--ccccc---CCceEEEEC-ccE
Confidence 688999999 5788766 789999999 8874 2 222 56 8999999988763 35673 268899975 999
Q ss_pred EEEe--ceEEeCCCcccccccccccccCCcccCCceEEEE-e-ecCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEEC
Q 047411 122 QIDG--SGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKF-D-RCNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQA 197 (226)
Q Consensus 122 ~I~G--~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~-~-~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~ 197 (226)
+|+| .|+|||+|+.||+...+ ..+...||++|.| . .|+|++|+|++++|+|+|++++..|++++|++++|.+
T Consensus 72 ~I~G~~~G~IdG~G~~ww~~~~~----~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~ 147 (349)
T 1hg8_A 72 TITGASGHVIDGNGQAYWDGKGS----NSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDN 147 (349)
T ss_dssp EEEECTTCEEECCGGGTCCSCTT----CTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEEC
T ss_pred EEEecCCCEEcCCcchhhhcccc----cCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEEC
Confidence 9999 69999999999984322 1110269999999 7 8999999999999999999999999999999999998
Q ss_pred CC-C-----------CCCCCeEEecCeecEEEEeeEEecCC
Q 047411 198 PG-T-----------SPNTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 198 ~~-~-----------~~ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
+. + ++|+||||+++|+||+|+||+|.+||
T Consensus 148 ~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gD 188 (349)
T 1hg8_A 148 RAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQD 188 (349)
T ss_dssp GGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSS
T ss_pred CCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCC
Confidence 63 2 58999999999999999999999998
No 9
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.7e-33 Score=245.07 Aligned_cols=164 Identities=24% Similarity=0.435 Sum_probs=141.0
Q ss_pred cchHHHHHHHHHHhcccCCCCCEEEecCCCeEEEeee-eeeCCCcCccEEEEEeeEEEeeCCCCCcCCCCCcceEEEeCc
Q 047411 40 ADDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPI-TFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSV 118 (226)
Q Consensus 40 ~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~~l-~l~~~~ks~~v~l~~~g~l~~~~~~~~~~~~~~~~~i~~~~~ 118 (226)
..||+|||+|| ++|++.+ +++|+||+| +|+. + .| ++ +++|+++|++.+. ...|. ++++.+.+
T Consensus 5 ~~~t~aiq~ai-~~c~~~g-g~~v~vP~G-~~~~--l~~l----~~-~~~l~~~g~~~~~--~~~w~----g~li~~~~- 67 (336)
T 1nhc_A 5 FTSASEASESI-SSCSDVV-LSSIEVPAG-ETLD--LSDA----AD-GSTITFEGTTSFG--YKEWK----GPLIRFGG- 67 (336)
T ss_dssp ESSHHHHHHHG-GGCSEEE-EESCEECTT-CCEE--CTTC----CT-TCEEEEESEEEEC--CCCSC----CCSEECCE-
T ss_pred ECCHHHHHHHH-HHhhccC-CCeEEECCC-EEEE--eecc----CC-CeEEEEeceEEcc--ccccc----CcEEEEec-
Confidence 35799999999 6788766 789999999 8863 3 33 56 8999999988763 35676 57888865
Q ss_pred cceEEEec--eEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEE
Q 047411 119 DSLQIDGS--GTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQ 196 (226)
Q Consensus 119 ~nv~I~G~--G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~ 196 (226)
+||+|+|. |+|||+|+.||+.... ..+ ..||+++.|.+|+|++|+|++++|+|+|++++. |++++|++++|.
T Consensus 68 ~nv~I~G~~gG~IdG~G~~~w~~~~~----~~~-~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~ 141 (336)
T 1nhc_A 68 KDLTVTMADGAVIDGDGSRWWDSKGT----NGG-KTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTID 141 (336)
T ss_dssp ESCEEEECTTCEEECCGGGTCCSCTT----TSS-SCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEE
T ss_pred CCEEEEcCCCeEEECCccccccccCc----CCC-CCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEE
Confidence 99999997 7999999999984322 112 579999999999999999999999999999999 999999999999
Q ss_pred CCCC----CCCCCeEEecCeecEEEEeeEEecCC
Q 047411 197 APGT----SPNTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 197 ~~~~----~~ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
++.. ++|+||||+++|+||+|+||+|.+||
T Consensus 142 ~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gD 175 (336)
T 1nhc_A 142 NSDGDDNGGHNTDGFDISESTGVYISGATVKNQD 175 (336)
T ss_dssp CTTHHHHTCCSCCSEEECSCEEEEEESCEEESSS
T ss_pred CCCcccccCCCCCcEEecCCCeEEEEeCEEEcCC
Confidence 9854 79999999999999999999999998
No 10
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=4.3e-33 Score=242.70 Aligned_cols=164 Identities=24% Similarity=0.422 Sum_probs=141.2
Q ss_pred chHHHHHHHHHHhcccCCCCCEEEecCCCeEEEeee-eeeCCCcCccEEEEEeeEEEeeCCCCCcCCCCCcceEEEeCcc
Q 047411 41 DDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPI-TFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVD 119 (226)
Q Consensus 41 ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~~l-~l~~~~ks~~v~l~~~g~l~~~~~~~~~~~~~~~~~i~~~~~~ 119 (226)
+-++|||+|+ ++|++.+ +++|+||+| +|+. + .| |+ +++|+++|++++. ...|. ++|+.+.+ +
T Consensus 10 ~g~~aiq~ai-~~c~~~g-g~~v~vP~G-~~l~--l~~l----~~-~~~l~~~g~~~~~--~~~w~----g~li~~~~-~ 72 (339)
T 1ia5_A 10 NGASSASKSK-TSCSTIV-LSNVAVPSG-TTLD--LTKL----ND-GTHVIFSGETTFG--YKEWS----GPLISVSG-S 72 (339)
T ss_dssp GHHHHHHHHG-GGCSEEE-EESCEECTT-CCEE--ECSC----CT-TCEEEEESEEEEC--CCCSC----CCSEEEEE-E
T ss_pred cchHHHHHHH-HHhhccC-CCeEEECCC-EEEE--eecc----CC-CeEEEEeCcEEcc--ccccc----CcEEEEEc-C
Confidence 3467999999 6788866 789999999 8873 3 33 56 9999999988763 35676 57999876 9
Q ss_pred ceEEEec--eEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEEC
Q 047411 120 SLQIDGS--GTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQA 197 (226)
Q Consensus 120 nv~I~G~--G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~ 197 (226)
||+|+|. |+|||+|+.||+...+ ..+ ..||+++.|.+|+|++|+|++++|+|+|++++..|++++|++++|.+
T Consensus 73 nv~I~G~~gG~IdG~G~~~w~~~~~----~~~-~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~ 147 (339)
T 1ia5_A 73 DLTITGASGHSINGDGSRWWDGEGG----NGG-KTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDN 147 (339)
T ss_dssp SCEEEECTTCEEECCGGGTCSSCTT----TSS-SCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEEC
T ss_pred cEEEEcCCCeEEeCCCCcccccccc----CCC-CCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEEC
Confidence 9999997 7999999999984322 112 67999999999999999999999999999999999999999999999
Q ss_pred CCC----CCCCCeEEecCeecEEEEeeEEecCC
Q 047411 198 PGT----SPNTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 198 ~~~----~~ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
+.+ ++|+||||+++|+||+|+||+|++||
T Consensus 148 ~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gD 180 (339)
T 1ia5_A 148 SDGDDNGGHNTDAFDIGTSTYVTISGATVYNQD 180 (339)
T ss_dssp GGGTTTTCCSCCSEEEESCEEEEEESCEEECSS
T ss_pred CccccccCCCCCcEEecCCceEEEEeeEEEcCC
Confidence 743 79999999999999999999999997
No 11
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=1.3e-33 Score=245.54 Aligned_cols=159 Identities=19% Similarity=0.307 Sum_probs=138.4
Q ss_pred HHHHHHHHHHhcccCCCCCEEEecCCCeEEEeeeeeeCCCcCccEEEEEeeEEEeeCCCCCcCCCCCcceEEEeCccceE
Q 047411 43 SMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQ 122 (226)
Q Consensus 43 t~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~~l~l~~~~ks~~v~l~~~g~l~~~~~~~~~~~~~~~~~i~~~~~~nv~ 122 (226)
++|||+ + ++|++.+ +++|+||+| +|+ .|.| ++ +++|+++|++++. ...|. ++||.+.+ +||+
T Consensus 8 ~~aiq~-i-~aC~~~g-g~~v~vP~G-~~l--~l~l----~~-~~~l~~~g~~~~~--~~~w~----~~~i~~~~-~ni~ 69 (335)
T 1k5c_A 8 VDDAKD-I-AGCSAVT-LNGFTVPAG-NTL--VLNP----DK-GATVTMAGDITFA--KTTLD----GPLFTIDG-TGIN 69 (335)
T ss_dssp TTGGGG-C-TTCSEEE-ECCEEECTT-CCE--EECC----CT-TCEEEECSCEEEC--CCCSC----SCSEEEEE-EEEE
T ss_pred HHHhHH-H-HhcccCC-CCEEEECCC-EEE--EEEe----CC-CeEEEEeccEecc--ccccc----CcEEEEEc-cCEE
Confidence 578999 8 7898877 889999999 886 3444 67 9999999988873 35676 58999974 9999
Q ss_pred EEe-ceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCceEEEEeCeee-EEEEeEEEECCCC
Q 047411 123 IDG-SGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVMGCIG-VEFGFLSIQAPGT 200 (226)
Q Consensus 123 I~G-~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~-v~i~~~~i~~~~~ 200 (226)
|+| .|+|||+|+.||+...+ ..+ ..||+++.|.+|+ ++|+|++++|||+|++++..|++ |+|++++|.++..
T Consensus 70 I~G~~G~idG~G~~ww~~~~~----~~~-~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~ 143 (335)
T 1k5c_A 70 FVGADHIFDGNGALYWDGKGT----NNG-THKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAG 143 (335)
T ss_dssp EECTTCEEECCGGGTCCSCTT----TSS-SCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGG
T ss_pred EEeCccEEcCChhHhhhcccc----cCC-CCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCC
Confidence 999 59999999999984322 112 6799999999999 99999999999999999999999 9999999999853
Q ss_pred -----CCCCCeEEecCeecEEEEeeEEecCC
Q 047411 201 -----SPNTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 201 -----~~ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
++|+||||+ +|+||+|+||+|++||
T Consensus 144 d~~~~~~NtDGidi-~s~nV~I~n~~i~~gD 173 (335)
T 1k5c_A 144 DTKNLGHNTDGFDV-SANNVTIQNCIVKNQD 173 (335)
T ss_dssp GGGGCCCSCCSEEE-ECSSEEEESCEEESSS
T ss_pred cccccCCCCCeEcc-cCCeEEEEeeEEEcCC
Confidence 899999999 9999999999999998
No 12
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.97 E-value=1e-29 Score=228.59 Aligned_cols=167 Identities=22% Similarity=0.325 Sum_probs=140.6
Q ss_pred ccceEE-eeecCccCCCCcchHHHHHHHHHHhcccC-CCCCEEEecCCCeEEEeeeeeeCCCcCccEEEEEe--eEEEee
Q 047411 23 NADEFN-VLDFGAAGDGNADDSMAFIKAWNNTCSAT-AKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLS--GSIIAP 98 (226)
Q Consensus 23 ~~~~~~-v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~-g~g~~v~iP~G~tY~~~~l~l~~~~ks~~v~l~~~--g~l~~~ 98 (226)
....++ |++|||++||.+|||+|||+||+ +|++. + +++|+||+| +|++++|.| |+ +++|+++ ++|+++
T Consensus 18 ~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aid-ac~~~~g-gg~V~vP~G-tYl~g~I~l----ks-~v~L~l~~GatL~~s 89 (464)
T 1h80_A 18 QDVNYDLVDDFGANGNDTSDDSNALQRAIN-AISRKPN-GGTLLIPNG-TYHFLGIQM----KS-NVHIRVESDVIIKPT 89 (464)
T ss_dssp CSEEEEHHHHHCCCTTSSSBCHHHHHHHHH-HHHTSTT-CEEEEECSS-EEEECSEEC----CT-TEEEEECTTCEEEEC
T ss_pred CcceeeehhccCcCCCCCchhHHHHHHHHH-HHhhccC-CcEEEECCC-eEEEeeEec----cC-ceEEEEcCCcEEEec
Confidence 467889 99999999999999999999994 67654 6 889999999 999999999 68 9999998 588887
Q ss_pred CC--CCCcCCCCCcceEEE---eCccceEEEece---EEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeee
Q 047411 99 NG--PNEWKEDDKSKWFDI---QSVDSLQIDGSG---TIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNM 170 (226)
Q Consensus 99 ~~--~~~~~~~~~~~~i~~---~~~~nv~I~G~G---~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i 170 (226)
.+ ...| +++.+ .+++|++|+|.| +|||+|+. ..||++|.|.+|+|++|+|+
T Consensus 90 ~~td~~~y------~~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~---------------~~rp~~i~~~~~~Nv~I~gI 148 (464)
T 1h80_A 90 WNGDGKNH------RLFEVGVNNIVRNFSFQGLGNGFLVDFKDSR---------------DKNLAVFKLGDVRNYKISNF 148 (464)
T ss_dssp CCTTCSCE------EEEEESSSSCEEEEEEEECTTCEEEECTTCS---------------CCBEEEEEECSEEEEEEEEE
T ss_pred cCCCcccC------CceEeecccCccceEEECcCcceEEeCCCCC---------------CCCceEEEEEeeccEEEeee
Confidence 64 3333 34443 678999999998 99998852 35889999999999999999
Q ss_pred EEeCCCceEEE-------------EeCeeeEEEEeEEEECCCCCCCCCe-EEecCeecEEEEeeEEe
Q 047411 171 NFINSPQTHVT-------------VMGCIGVEFGFLSIQAPGTSPNTDG-IHIQASSNVYIHNAHIS 223 (226)
Q Consensus 171 ~i~ns~~~~i~-------------~~~s~~v~i~~~~i~~~~~~~ntDG-i~~~~s~~v~I~n~~i~ 223 (226)
+++|+ |+++ ...|+||+|+|++|.++ ++++| ++...|+||+|+||++.
T Consensus 149 ti~n~--w~ih~s~~V~i~NtDGi~i~s~nV~I~n~~I~~g---ddgiGs~~~~~~~NV~V~n~~~~ 210 (464)
T 1h80_A 149 TIDDN--KTIFASILVDVTERNGRLHWSRNGIIERIKQNNA---LFGYGLIQTYGADNILFRNLHSE 210 (464)
T ss_dssp EEECC--SCBSCSEEECEEEETTEEEEEEEEEEEEEEEESC---CTTCEEEEESEEEEEEEEEEEEE
T ss_pred EEecc--ceEeeceeeeeecCCCceeeccCEEEeceEEecC---CCeEEecccCCEeEEEEEeeEEE
Confidence 99995 4443 13799999999999996 57889 88899999999999954
No 13
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.96 E-value=1.3e-29 Score=231.88 Aligned_cols=176 Identities=19% Similarity=0.206 Sum_probs=143.5
Q ss_pred ccceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCCCeEEE-eeeeeeCCCcCccEEEEEee----EEEe
Q 047411 23 NADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLV-HPITFTGPCKSSDITIMLSG----SIIA 97 (226)
Q Consensus 23 ~~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~-~~l~l~~~~ks~~v~l~~~g----~l~~ 97 (226)
.++.++|+||||++||.+|||+|||+||+ + |++|+||+| +|++ ++|.| ++ +++|++++ +|++
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~-~------Gg~V~iP~G-tYlis~~l~l----~s-nv~L~g~g~~~t~L~~ 85 (609)
T 3gq8_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIE-S------GFPVYVPYG-TFMVSRGIKL----PS-NTVLTGAGKRNAVIRF 85 (609)
T ss_dssp CSSSEEGGGGTCCCEEEEECHHHHHHHHH-T------SSCEEECSE-EEEESSCEEE----CS-SEEEEESCTTTEEEEE
T ss_pred CCcEEEeEecccCCCCCchhHHHHHHHHH-c------CCEEEECCc-cEEEeCceEE----CC-CcEEEEeeCCCCEEEe
Confidence 46789999999999999999999999995 3 358999999 9999 89999 57 99999974 7777
Q ss_pred eCCCCCcCCCCCcceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCc
Q 047411 98 PNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQ 177 (226)
Q Consensus 98 ~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~ 177 (226)
+++...|.. -..+++.+.+++||+|+|. +|||+|+.||.. .+ .++ ..||++|.|.+|+|++|++++++|+|+
T Consensus 86 ~~~~p~~~~-li~~lI~a~~~~NItItG~-TIDGNG~~~g~~-~~----~~g-~~RP~lI~f~~c~NV~I~gVti~NSp~ 157 (609)
T 3gq8_A 86 MDSVGRGES-LMYNENVTTGNENIFLSSF-TLDGNNKRLGQG-IS----GIG-GSRESNLSIRACHNVYIRDIEAVDCTL 157 (609)
T ss_dssp CTTCCSSCC-SEEESCTTTCCEEEEEEEE-EEECCGGGGCSS-CC----CSS-TTTTCSEEEESCEEEEEEEEEEESCSS
T ss_pred CCCCCCCCc-eeeeeeeecccccEEEEee-EEECCccccCcc-cc----cCC-CCCccEEEEEeeceEEEEeeEEEeCCC
Confidence 655433320 0113456678999999996 999999854431 11 122 579999999999999999999999999
Q ss_pred eEEEEeC-----------------eeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEe
Q 047411 178 THVTVMG-----------------CIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHIS 223 (226)
Q Consensus 178 ~~i~~~~-----------------s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~ 223 (226)
+++.+.. |+||+|+|++|++. ..|+|-+.+|+||+|+||++.
T Consensus 158 ~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~t----GDDcIaIksseNI~I~Nc~~~ 216 (609)
T 3gq8_A 158 HGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGF----GDDGITTHHSQYINILNCYSH 216 (609)
T ss_dssp CSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESC----SSCSEEECSCEEEEEESCEEE
T ss_pred CCeEEeCCCCCccccCCCccccccceeEEEEeeEEEec----CCCEEEecCCeeEEEEeEEEE
Confidence 9888764 79999999999763 459999999999999999984
No 14
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.96 E-value=4e-29 Score=232.06 Aligned_cols=176 Identities=19% Similarity=0.205 Sum_probs=142.8
Q ss_pred ccceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCCCeEEE-eeeeeeCCCcCccEEEEEee----EEEe
Q 047411 23 NADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLV-HPITFTGPCKSSDITIMLSG----SIIA 97 (226)
Q Consensus 23 ~~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~-~~l~l~~~~ks~~v~l~~~g----~l~~ 97 (226)
.++.++|+||||++||.+|||+|||+||+ + |++|+||+| +|++ ++|.| ++ +++|++++ +|++
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~-a------Gg~V~IPaG-tYlisg~I~L----~s-nv~L~Geg~~~t~Lk~ 85 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIE-S------GFPVYVPYG-TFMVSRGIKL----PS-NTVLTGAGKRNAVIRF 85 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHH-T------TSCEEECSE-EEEESSCEEE----CS-SCEEEEEEEEEEEEEE
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHH-c------CCEEEECCc-cEEEEeEEEE----CC-CcEEEEecCCCCEEEe
Confidence 46789999999999999999999999995 2 358999999 9999 89999 57 99998874 6777
Q ss_pred eCCCCCcCCCCCcceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCc
Q 047411 98 PNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQ 177 (226)
Q Consensus 98 ~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~ 177 (226)
+++...|.. -..+++.+.+++||+|+|. +|||+|+.||... ..++ ..||.+|.|.+|+|++|++++++|+|+
T Consensus 86 ~~d~p~~~~-li~~lI~a~gveNItItG~-TIDGNG~~~g~~~-----~~~g-~~RP~lI~f~~ckNV~I~gVti~NSp~ 157 (772)
T 3gqn_A 86 MDSVGRGES-LMYNENVTTGNENIFLSSF-TLDGNNKRLGQGI-----SGIG-GSRESNLSIRACHNVYIRDIEAVDCTL 157 (772)
T ss_dssp CTTCCSSCC-SEEESCTTTCCEEEEEEEE-EEECCGGGGCSSC-----CCSS-TTTTCSEEEESCEEEEEEEEEEESCSS
T ss_pred CCCCCCCCc-eeeeeeeccCceeEEEEee-EEeCCccccCccc-----ccCC-CCCccEEEEEeeceEEEEeEEEEeCCC
Confidence 665443320 0123456778999999996 9999999444311 1122 579999999999999999999999999
Q ss_pred eEEEEeC-----------------eeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEe
Q 047411 178 THVTVMG-----------------CIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHIS 223 (226)
Q Consensus 178 ~~i~~~~-----------------s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~ 223 (226)
+++.+.. |+||+|+|++|++. ..|+|-+.+|+||+|+||++.
T Consensus 158 ~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~nt----GDDcIAIksSeNI~I~Nc~c~ 216 (772)
T 3gqn_A 158 HGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGF----GDDGITTHHSQYINILNCYSH 216 (772)
T ss_dssp CSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESC----SSCSEEECSCEEEEEESCEEE
T ss_pred CCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEec----CcCeEEecCCceEEEEeEEEE
Confidence 9888763 89999999999863 459999999999999999984
No 15
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.96 E-value=4.7e-29 Score=217.79 Aligned_cols=172 Identities=16% Similarity=0.215 Sum_probs=131.2
Q ss_pred cceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCCC---eEEEe-eeeeeCCCcCccEEEEEe--eEEEe
Q 047411 24 ADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKGK---TFLVH-PITFTGPCKSSDITIMLS--GSIIA 97 (226)
Q Consensus 24 ~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~---tY~~~-~l~l~~~~ks~~v~l~~~--g~l~~ 97 (226)
...++|+||||+|||++|||+|||+||+++|+..+ |++|+||+|. +|+++ ++.| |+ +++|+++ +++.+
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~G-GGtVyVPaG~~~~tYlvt~tI~L----kS-nV~L~Ge~~AtIl~ 122 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPS-GGELFIPASNQAVGYIVGSTLLI----PG-GVNIRGVGKASQLR 122 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTT-CEEEECCCCSSTTCEEESSCEEE----CT-TEEEECCSTTSEEE
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCC-CeEEEECCCCcceeEEECCeEEe----cC-CeEEEEecCceEee
Confidence 46899999999999999999999999987777656 8899999994 69984 8888 67 9999988 35544
Q ss_pred eCCC--CCcCCCCCcceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCc-eEEEEeecCcEEEeeeE--E
Q 047411 98 PNGP--NEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAP-TVLKFDRCNNLRMNNMN--F 172 (226)
Q Consensus 98 ~~~~--~~~~~~~~~~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp-~~i~~~~~~nv~i~~i~--i 172 (226)
+... .........+++.+.+++|++|+|.|+|||++..|..... ..|+ ..+ .++++.|++++ +
T Consensus 123 s~~~I~GtIia~~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~~---------~~Rq~~~~---~fdnV~Vn~Vt~~v 190 (514)
T 2vbk_A 123 AKSGLTGSVLRLSYDSDTIGRYLRNIRVTGNNTCNGIDTNITAEDS---------VIRQVYGW---VFDNVMVNEVETAY 190 (514)
T ss_dssp ECTTCCSEEEEECCCSCCSCEEEESCEEECCSSSEEEEESCCTTCS---------SCCCEESE---EEESCEEEEEEEEE
T ss_pred ccccccccEEeccCCccccccCceEEEEECCCeEeCCCCCccccce---------eeeccceE---EeeeEEEEeEEEeE
Confidence 3221 0000011235667778999999999999998875532110 2333 233 26799999995 4
Q ss_pred eCCCceEEEEeCeeeEEEE-eEEEECCCCCCCCCeEEecCeecEEEEeeEEecCC
Q 047411 173 INSPQTHVTVMGCIGVEFG-FLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 173 ~ns~~~~i~~~~s~~v~i~-~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
.+++.|++++..|++++++ ++.+. ++|+||.|.||+|+.||
T Consensus 191 ~~Sg~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGD 232 (514)
T 2vbk_A 191 LMQGLWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGN 232 (514)
T ss_dssp EEESEEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTT
T ss_pred eccCcEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCc
Confidence 5889999999999999987 55553 38999999999999998
No 16
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.94 E-value=4.3e-28 Score=222.46 Aligned_cols=174 Identities=12% Similarity=0.204 Sum_probs=136.7
Q ss_pred EEeeecCccCCCCcchHHHHHHHHHHhccc-------------------------CCCCCEEEecCCCeEEE---eeeee
Q 047411 27 FNVLDFGAAGDGNADDSMAFIKAWNNTCSA-------------------------TAKSPTMVIPKGKTFLV---HPITF 78 (226)
Q Consensus 27 ~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~-------------------------~g~g~~v~iP~G~tY~~---~~l~l 78 (226)
++...|||++||.++.+.+|. ++.+++.. .+ |++|+||+| +|++ +++.|
T Consensus 143 ~n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~g-gg~v~vP~G-~yl~g~~G~i~l 219 (549)
T 1x0c_A 143 FDDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTS-ASTVVFNPG-VYYFTGHDHMVL 219 (549)
T ss_dssp EGGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCC-CSEEEECSE-EEECCTTCCEEE
T ss_pred ECCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCC-CCEEEECCe-EEecCCceEEEe
Confidence 334469999999999998887 44233322 35 889999999 9997 58999
Q ss_pred eCCCcCccEE-EEEe-e-EEEeeCCCCCcCCCCCcceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCce
Q 047411 79 TGPCKSSDIT-IMLS-G-SIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPT 155 (226)
Q Consensus 79 ~~~~ks~~v~-l~~~-g-~l~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~ 155 (226)
|| +++ |+++ | .|++ +++...+++||+|+|.|+|||+|..||...... ....+ ..||+
T Consensus 220 ----~s-~~~~L~l~~GA~L~g-------------s~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~-~~~~~-~~rp~ 279 (549)
T 1x0c_A 220 ----SS-SVTWVYFAPGAYVKG-------------AVEFLSTASEVKASGHGVLSGEQYVWYADPDEG-YQKAS-GANNN 279 (549)
T ss_dssp ----CT-TCCEEEECTTEEEES-------------CEEECCCSSEEEEESSCEEECTTSCTTEEGGGT-TEECG-GGCSC
T ss_pred ----cC-CCCeEecCCCCEEEE-------------EEEEecCceeEEEEeeEEEECCCceecccCccc-ccccc-cCCCc
Confidence 68 999 9998 4 4542 223333799999999999999999999632110 00112 34788
Q ss_pred EEEE------eecCcEEEeeeEEeCCCceEEEEe-Ce-ee--EEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEecC
Q 047411 156 VLKF------DRCNNLRMNNMNFINSPQTHVTVM-GC-IG--VEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225 (226)
Q Consensus 156 ~i~~------~~~~nv~i~~i~i~ns~~~~i~~~-~s-~~--v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~g 225 (226)
++.| .+|+|++|+|++++|||+|++++. .| ++ ++|+++++.++. .+||||||+. +||+|+||+|++|
T Consensus 280 ~i~~~~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~g 356 (549)
T 1x0c_A 280 GLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTD 356 (549)
T ss_dssp CCCSEEEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEES
T ss_pred eEEEeeccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCC
Confidence 8888 999999999999999999999966 45 59 999999999853 4789999999 9999999999999
Q ss_pred C
Q 047411 226 T 226 (226)
Q Consensus 226 D 226 (226)
|
T Consensus 357 D 357 (549)
T 1x0c_A 357 D 357 (549)
T ss_dssp S
T ss_pred C
Confidence 8
No 17
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.93 E-value=2.1e-26 Score=211.52 Aligned_cols=142 Identities=15% Similarity=0.190 Sum_probs=119.6
Q ss_pred CCCCEEEecCCCeEEE-------------eeeeeeCCCcCccEE-EEEe-e-EEEeeCCCCCcCCCCCcceEEEeCccce
Q 047411 58 AKSPTMVIPKGKTFLV-------------HPITFTGPCKSSDIT-IMLS-G-SIIAPNGPNEWKEDDKSKWFDIQSVDSL 121 (226)
Q Consensus 58 g~g~~v~iP~G~tY~~-------------~~l~l~~~~ks~~v~-l~~~-g-~l~~~~~~~~~~~~~~~~~i~~~~~~nv 121 (226)
| |++|+||+| +|++ ++|.| || +++ |+++ | +|+ .++.+.+++||
T Consensus 230 g-gg~v~vP~G-~yl~~~~~~~gpc~~g~G~i~l----kS-nvt~L~L~~GA~l~--------------g~i~~~~~~nv 288 (574)
T 1ogo_X 230 A-KSILYFPPG-VYWMNQDQSGNSGKLGSNHIRL----NS-NTYWVYLAPGAYVK--------------GAIEYFTKQNF 288 (574)
T ss_dssp S-SSEEEECSE-EEEECBCTTCCBSCSSSCCEEC----CT-TCCEEEECTTEEEE--------------SCEEECCSSCE
T ss_pred C-CCEEEECCc-EEEEeccccCCcccccceEEEe----cC-CCceEEecCCcEEE--------------ccEEEeCceeE
Confidence 5 789999999 9999 46777 67 888 9887 4 443 34788899999
Q ss_pred EEEeceEEeCCCcccccccccccccCCcccCCceEEEEe------ecCcEEEeeeEEeCCCceEEEEeCeeeE--EEEeE
Q 047411 122 QIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFD------RCNNLRMNNMNFINSPQTHVTVMGCIGV--EFGFL 193 (226)
Q Consensus 122 ~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~------~~~nv~i~~i~i~ns~~~~i~~~~s~~v--~i~~~ 193 (226)
+|+|.|+|||+|+.||....+ ....+ ..||+++.|. +|+|++|+|++++|||+|++++..|+++ +|+++
T Consensus 289 ~ItG~GtIDG~G~~ww~~~~~--~~~~~-~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv 365 (574)
T 1ogo_X 289 YATGHGILSGENYVYQANAGD--NYIAV-KSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDY 365 (574)
T ss_dssp EEESSCEEECTTSCTTCBTTT--TTBSC-CCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEE
T ss_pred EEEeCEEEeCCCccccccccc--ccccc-cCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEee
Confidence 999999999999999973211 01112 4588888887 9999999999999999999999999999 99999
Q ss_pred EEECCCCCCCCCeEEecCeecEEEEeeEEecCC
Q 047411 194 SIQAPGTSPNTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 194 ~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
++.++. ..||||||+. +||+|+||+|++||
T Consensus 366 ~i~~~~-~~nTDGIDi~--~NV~I~nc~I~~gD 395 (574)
T 1ogo_X 366 KQVGAF-FFQTDGPEIY--PNSVVHDVFWHVND 395 (574)
T ss_dssp EEECCC-STTCCCCBCC--TTCEEEEEEEEESS
T ss_pred EeeCCC-CCCCccCccc--CCEEEEeeEEECCC
Confidence 998743 2469999999 99999999999998
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.92 E-value=2.3e-25 Score=196.04 Aligned_cols=174 Identities=18% Similarity=0.305 Sum_probs=127.1
Q ss_pred eEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCCCeEEEe--------eeeeeCCCcCccEEEEEee----
Q 047411 26 EFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVH--------PITFTGPCKSSDITIMLSG---- 93 (226)
Q Consensus 26 ~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~--------~l~l~~~~ks~~v~l~~~g---- 93 (226)
.++|+||||+|||.+|||+|||+||++|++. + |++|+||+| +|++. ++.+ ++ +++|+++|
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~-g-g~~v~~p~G-~y~~~~~~~~~~g~l~~----~~-~v~l~g~g~~~t 73 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAA-G-GGTVYLPAG-EYRVSAAGEPGDGCLML----KD-GVYLAGAGMGET 73 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHT-T-SEEEEECSE-EEEECCCSSGGGCSEEC----CT-TEEEEESSBTTE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhc-C-CCEEEECCe-EEEEcccccCCcccEEe----cC-CeEEEEcCCCCc
Confidence 6899999999999999999999999765544 6 789999999 99994 7888 57 99999984
Q ss_pred EEEeeCCCCCcCC----CCCcceEEEeCccceEEEec-----eEEeCCCcccccccccccccCCcccCCceEEEEeecCc
Q 047411 94 SIIAPNGPNEWKE----DDKSKWFDIQSVDSLQIDGS-----GTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNN 164 (226)
Q Consensus 94 ~l~~~~~~~~~~~----~~~~~~i~~~~~~nv~I~G~-----G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~n 164 (226)
+|++.++...+.. .....-....++++++|.|. |++|| ||... .|. .+..|++
T Consensus 74 ~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idG----w~~~~------------~~~--~~~~~~n 135 (377)
T 2pyg_A 74 VIKLIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDG----WFNGY------------IPG--GDGADRD 135 (377)
T ss_dssp EEEECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEE----EEECS------------CTT--SSCCEEE
T ss_pred EEEecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccc----eeccc------------Ccc--ccccccc
Confidence 4566554433220 00011112345789999997 88887 88621 110 1247999
Q ss_pred EEEeeeEEeCCCceEEEEeCee-eEEEEeEEEECCC-------------------CCCCCCeEEecC-eecEEEEeeEEe
Q 047411 165 LRMNNMNFINSPQTHVTVMGCI-GVEFGFLSIQAPG-------------------TSPNTDGIHIQA-SSNVYIHNAHIS 223 (226)
Q Consensus 165 v~i~~i~i~ns~~~~i~~~~s~-~v~i~~~~i~~~~-------------------~~~ntDGi~~~~-s~~v~I~n~~i~ 223 (226)
++|++++++|++.|++++..|. +++++|+.+.... ..++.|||++.. |++++|+||++.
T Consensus 136 v~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~ 215 (377)
T 2pyg_A 136 VTIERVEVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAY 215 (377)
T ss_dssp EEEEEEEEECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEE
T ss_pred eEEEeEEEEecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEE
Confidence 9999999999999999998765 5677766663211 125688888776 888888888887
Q ss_pred cC
Q 047411 224 NG 225 (226)
Q Consensus 224 ~g 225 (226)
..
T Consensus 216 ~~ 217 (377)
T 2pyg_A 216 GN 217 (377)
T ss_dssp SC
T ss_pred Cc
Confidence 53
No 19
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.82 E-value=2.3e-20 Score=173.55 Aligned_cols=162 Identities=19% Similarity=0.271 Sum_probs=123.1
Q ss_pred cceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCC---------CEEEecCCCeEEE-eeeeeeCCCcCccEEEEEee
Q 047411 24 ADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKS---------PTMVIPKGKTFLV-HPITFTGPCKSSDITIMLSG 93 (226)
Q Consensus 24 ~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g---------~~v~iP~G~tY~~-~~l~l~~~~ks~~v~l~~~g 93 (226)
...++|+||||+|||++|||+|||+||+ ++++.| + .+|+||+| +|++ ++|.+ ++ ++.|..++
T Consensus 47 ~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~-~a~~~G-ggc~~st~~~~~V~~P~G-tYlvs~tI~l----~~-~t~L~G~~ 118 (758)
T 3eqn_A 47 PVFRNVKNYGAKGDGNTDDTAAIQAAIN-AGGRCG-QGCDSTTTQPALVYFPPG-TYKVSSPLVV----LY-QTQLIGDA 118 (758)
T ss_dssp CSEEEGGGGTCCCEEEEECHHHHHHHHH-TTSCSC-TTCCCCSSSCEEEEECSS-EEEESSCEEC----CT-TEEEEECS
T ss_pred eEEEEHHHcCcCCCCCchhHHHHHHHHH-Hhhhcc-cccccccccceEEEECCc-eEEEcccEEc----cC-CeEEEecC
Confidence 4467999999999999999999999996 454433 2 58999999 9998 48998 57 99999883
Q ss_pred ----EEEeeCCCCCcCCCCCcceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEee
Q 047411 94 ----SIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNN 169 (226)
Q Consensus 94 ----~l~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~ 169 (226)
+|+++++. .+ ..+ |.+ ...+++|..||... ...+..++|+.|+
T Consensus 119 ~~~pvIka~~~F---~G---~~l----------i~~-d~y~~~G~~w~~~~---------------~~F~r~irNlviD- 165 (758)
T 3eqn_A 119 KNLPTLLAAPNF---SG---IAL----------IDA-DPYLAGGAQYYVNQ---------------NNFFRSVRNFVID- 165 (758)
T ss_dssp SSCCEEEECTTC---CS---SCS----------EES-SCBCGGGCBSSCGG---------------GCCCEEEEEEEEE-
T ss_pred CCCCeEecCCCC---CC---cce----------eec-cccCCCCccccccc---------------cceeeeecceEEe-
Confidence 67764442 21 122 233 23456778888521 1223356777777
Q ss_pred eEEeCCCceEEEEeCeeeEEEEeEEEECCCCCC-CCCeEEecCeecEEEEeeEEecCC
Q 047411 170 MNFINSPQTHVTVMGCIGVEFGFLSIQAPGTSP-NTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 170 i~i~ns~~~~i~~~~s~~v~i~~~~i~~~~~~~-ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
++-.+++.++++...|++..+.||.|+.+..+. .++||+++.++...|+|+.|..|+
T Consensus 166 ~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~ 223 (758)
T 3eqn_A 166 LRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGN 223 (758)
T ss_dssp CTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCS
T ss_pred ccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCc
Confidence 666677789999999999999999999987654 489999998889999999999886
No 20
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.54 E-value=6.2e-14 Score=122.58 Aligned_cols=181 Identities=13% Similarity=0.229 Sum_probs=121.6
Q ss_pred cccccceEEeeec----CccCCCCcchHHHHHHHHHHhcc------cCCCCCEEEecCCCeEEE-eeeeeeCCCcCccEE
Q 047411 20 IRINADEFNVLDF----GAAGDGNADDSMAFIKAWNNTCS------ATAKSPTMVIPKGKTFLV-HPITFTGPCKSSDIT 88 (226)
Q Consensus 20 ~~~~~~~~~v~dy----GA~~dg~~ddt~aiq~Ai~~a~~------~~g~g~~v~iP~G~tY~~-~~l~l~~~~ks~~v~ 88 (226)
++++...|+|++| +|++++.+|++++|+++|.+..+ +.. |++|++|+| +|.+ +++.+. |+ .++
T Consensus 8 ~~~~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~p-GdvI~L~~G-~Y~l~g~ivId---kp-~Lt 81 (410)
T 2inu_A 8 PLNSPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARP-GAAIIIPPG-DYDLHTQVVVD---VS-YLT 81 (410)
T ss_dssp ----CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCC-CEEEECCSE-EEEECSCEEEC---CT-TEE
T ss_pred ccccCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCC-CCEEEECCC-eeccCCcEEEe---cC-cEE
Confidence 3456889999999 89999999999999999966543 223 899999999 9996 899996 54 499
Q ss_pred EEEee--E----EEeeCCCCCc----CC---------CCCcceEEEeC-----ccceEEEeceEEeCC-----Ccccccc
Q 047411 89 IMLSG--S----IIAPNGPNEW----KE---------DDKSKWFDIQS-----VDSLQIDGSGTIDGR-----GKAWWDI 139 (226)
Q Consensus 89 l~~~g--~----l~~~~~~~~~----~~---------~~~~~~i~~~~-----~~nv~I~G~G~idG~-----G~~~~~~ 139 (226)
|..++ + |..-.....| ++ ...++.|.++. .++|+|.| =+|+|- |..+
T Consensus 82 L~G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~-v~I~G~~~~~~G~s~--- 157 (410)
T 2inu_A 82 IAGFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD-FCLDGVGFTPGKNSY--- 157 (410)
T ss_dssp EECSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEES-CEEECCCCSSSTTSC---
T ss_pred EEecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECC-EEEECCEeecCCCCc---
Confidence 87753 3 3211111232 21 01234455542 25666666 355554 4322
Q ss_pred cccccccCCcccCCceEEEEee-cCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEECC-----------C--------
Q 047411 140 SCKINKKEGCVKLAPTVLKFDR-CNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQAP-----------G-------- 199 (226)
Q Consensus 140 ~~~~~~~~~~~~~rp~~i~~~~-~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~~-----------~-------- 199 (226)
...-.+|.+.. +++++|+++.|.+. .|++.+..+++++|+++.|... .
T Consensus 158 -----------~~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e~GNgI~L~G~~~~~~I~~N~i 225 (410)
T 2inu_A 158 -----------HNGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAECGNCVELTGAGQATIVSGNHM 225 (410)
T ss_dssp -----------CCSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEESSSEEEEECSCEESCEEESCEE
T ss_pred -----------ccCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEecCCceeeccccccceEeccee
Confidence 22335677765 78889999999998 8899999999999999999831 1
Q ss_pred -CCCCCCeEEecCeecEEEEeeEE
Q 047411 200 -TSPNTDGIHIQASSNVYIHNAHI 222 (226)
Q Consensus 200 -~~~ntDGi~~~~s~~v~I~n~~i 222 (226)
.....+||.++.+.+.+|+++.+
T Consensus 226 ~~~~dG~gIyl~ns~~~~I~~N~i 249 (410)
T 2inu_A 226 GAGPDGVTLLAENHEGLLVTGNNL 249 (410)
T ss_dssp ECCTTSEEEEEESEESCEEESCEE
T ss_pred eecCCCCEEEEEeCCCCEEECCCc
Confidence 01223347777777777777765
No 21
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.33 E-value=1.5e-11 Score=114.78 Aligned_cols=94 Identities=20% Similarity=0.372 Sum_probs=70.7
Q ss_pred cceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCCCeEEEe-eeeeeCCCcCccEEEEEee--EEEeeCC
Q 047411 24 ADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVH-PITFTGPCKSSDITIMLSG--SIIAPNG 100 (226)
Q Consensus 24 ~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~-~l~l~~~~ks~~v~l~~~g--~l~~~~~ 100 (226)
...++|+||||+|||++|||+|||+||+ ++. + +.+|+||+| +|++. +|.+ ++ +++|..++ +|... .
T Consensus 398 ~~~vnVkd~GA~GDG~tDDT~Ai~~al~-aa~--~-g~~v~~P~G-~Y~vt~Ti~i----p~-~~~ivG~~~~~I~~~-G 466 (758)
T 3eqn_A 398 SDFVSVRSQGAKGDGHTDDTQAIKNVFA-KYA--G-CKIIFFDAG-TYIVTDTIQI----PA-GTQIVGEVWSVIMGT-G 466 (758)
T ss_dssp GGEEETTTTTCCCEEEEECHHHHHHHHH-HHT--T-TSEEECCSE-EEEESSCEEE----CT-TCEEECCSSEEEEEC-S
T ss_pred cceEEeeeccccCCCCchhHHHHHHHHH-Hhc--C-CCEEEECCC-EeEECCeEEc----CC-CCEEEecccceEecC-C
Confidence 4689999999999999999999999996 443 3 789999999 99994 8999 46 89998774 66542 2
Q ss_pred CCCcCC-CCCcceEEE---eCccceEEEeceEEe
Q 047411 101 PNEWKE-DDKSKWFDI---QSVDSLQIDGSGTID 130 (226)
Q Consensus 101 ~~~~~~-~~~~~~i~~---~~~~nv~I~G~G~id 130 (226)
..|.. .+.++.+.+ .....+.|+|- .++
T Consensus 467 -~~F~d~~~P~pvv~VG~~gd~G~veisdl-~~~ 498 (758)
T 3eqn_A 467 -SKFTDYNNPQPVIQVGAPGSSGVVEITDM-IFT 498 (758)
T ss_dssp -GGGCCTTSCEEEEEESCTTCBSCEEEESC-EEE
T ss_pred -ccccCCCCCeeeEEeCCCCCCCeEEEEeE-EEE
Confidence 33443 245678887 33457788773 444
No 22
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.97 E-value=4.4e-09 Score=95.47 Aligned_cols=152 Identities=11% Similarity=0.055 Sum_probs=92.1
Q ss_pred HHHHHHHHHHhcccCCCCCEEEecCCCeEEEeeeeeeCC-CcCccEEEEEe--e--EEEeeCCCCCcCCCCCcceEEEeC
Q 047411 43 SMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGP-CKSSDITIMLS--G--SIIAPNGPNEWKEDDKSKWFDIQS 117 (226)
Q Consensus 43 t~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~~l~l~~~-~ks~~v~l~~~--g--~l~~~~~~~~~~~~~~~~~i~~~~ 117 (226)
.+.||+|++ ++++ |.+|+|++| +|.-..+.+.+. ...++++|..+ + +|.. ...|.+.+
T Consensus 31 ~~~Lq~Ai~-~A~p---GDtI~L~~G-tY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G------------~~~l~i~g 93 (506)
T 1dbg_A 31 NETLYQVVK-EVKP---GGLVQIADG-TYKDVQLIVSNSGKSGLPITIKALNPGKVFFTG------------DAKVELRG 93 (506)
T ss_dssp HHHHHHHHH-HCCT---TCEEEECSE-EEETCEEEECCCCBTTBCEEEEESSTTSEEEEE------------SCEEEECS
T ss_pred HHHHHHHHH-hCCC---CCEEEECCC-EEecceEEEecCCcCCCCEEEECCCCCccEEeC------------CceEEEEc
Confidence 457999995 5665 889999999 997546666210 00126777653 1 2221 12355543
Q ss_pred ccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCce-EEEEe--------CeeeE
Q 047411 118 VDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQT-HVTVM--------GCIGV 188 (226)
Q Consensus 118 ~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~-~i~~~--------~s~~v 188 (226)
++++|+|. +|.+.+..... . . ...+..+.+. .++++|++++|.+...- .+.+. .+++.
T Consensus 94 -~~v~i~GL-~i~~~~~~~~~-~-------~--~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n 160 (506)
T 1dbg_A 94 -EHLILEGI-WFKDGNRAIQA-W-------K--SHGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHC 160 (506)
T ss_dssp -SSEEEESC-EEEEECCCTTT-C-------C--TTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSC
T ss_pred -CCEEEECe-EEECCCcceee-e-------e--cccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeecccc
Confidence 67777773 55544321100 0 0 0113345554 58899999999987331 02222 56677
Q ss_pred EEEeEEEECCCCCCCCC----eEEecC-------eecEEEEeeEEec
Q 047411 189 EFGFLSIQAPGTSPNTD----GIHIQA-------SSNVYIHNAHISN 224 (226)
Q Consensus 189 ~i~~~~i~~~~~~~ntD----Gi~~~~-------s~~v~I~n~~i~~ 224 (226)
+|++++|.+........ ||+++. +.+..|++++|..
T Consensus 161 ~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~ 207 (506)
T 1dbg_A 161 RIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSN 207 (506)
T ss_dssp EEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEE
T ss_pred EEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcc
Confidence 99999999854433343 888886 3689999999874
No 23
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=98.68 E-value=1e-07 Score=87.71 Aligned_cols=133 Identities=11% Similarity=0.095 Sum_probs=88.0
Q ss_pred CCE-EEecCCCeEEEeeeeeeCCCcCccEEEEEeeEEEeeCCC------CCcCCC-CCcceEEEe------CccceEEEe
Q 047411 60 SPT-MVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGP------NEWKED-DKSKWFDIQ------SVDSLQIDG 125 (226)
Q Consensus 60 g~~-v~iP~G~tY~~~~l~l~~~~ks~~v~l~~~g~l~~~~~~------~~~~~~-~~~~~i~~~------~~~nv~I~G 125 (226)
+.+ |++++| .++.+.+.+.+. . +++|...|+|...... ..|+.. .....+.+. +++||+|+|
T Consensus 264 nvt~L~L~~G-A~l~g~i~~~~~--~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~G 339 (574)
T 1ogo_X 264 NTYWVYLAPG-AYVKGAIEYFTK--Q-NFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVG 339 (574)
T ss_dssp TCCEEEECTT-EEEESCEEECCS--S-CEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEES
T ss_pred CCceEEecCC-cEEEccEEEeCc--e-eEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEEC
Confidence 456 888999 888888888652 3 8888877898653210 111110 011233333 789999999
Q ss_pred ceEEeCCCcccccccccccccCCcccCCceEEEEeecCcE--EEeeeEEeCCCce---EEEEeCeeeEEEEeEEEECCCC
Q 047411 126 SGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNL--RMNNMNFINSPQT---HVTVMGCIGVEFGFLSIQAPGT 200 (226)
Q Consensus 126 ~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv--~i~~i~i~ns~~~---~i~~~~s~~v~i~~~~i~~~~~ 200 (226)
-.+.+. ..|. +.+..|+++ +|+++++.+++.| ++++. +||+|+|++|.+
T Consensus 340 iti~NS---p~w~------------------i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~--- 393 (574)
T 1ogo_X 340 PTINAP---PFNT------------------MDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHV--- 393 (574)
T ss_dssp CEEECC---SSCS------------------EEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEE---
T ss_pred eEEECC---CCcE------------------EeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEEC---
Confidence 655542 2332 667788888 8888888876665 45555 788888888886
Q ss_pred CCCCCeEEecCeecEEEEeeEEecC
Q 047411 201 SPNTDGIHIQASSNVYIHNAHISNG 225 (226)
Q Consensus 201 ~~ntDGi~~~~s~~v~I~n~~i~~g 225 (226)
..|.|-+-+ +||+|+||.+.+|
T Consensus 394 --gDDcIaIks-~NI~I~nc~i~~g 415 (574)
T 1ogo_X 394 --NDDAIKIYY-SGASVSRATIWKC 415 (574)
T ss_dssp --SSCSEECCS-TTCEEEEEEEEEC
T ss_pred --CCCEEEECC-ccEEEEeEEEECC
Confidence 357776655 7777777777653
No 24
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.64 E-value=2.3e-07 Score=80.86 Aligned_cols=63 Identities=14% Similarity=0.222 Sum_probs=47.4
Q ss_pred EEEEeecCcEEEeeeEEeCCCc--------------------eEEEEe-CeeeEEEEeEEEECCCCCCCCCeEEecCeec
Q 047411 156 VLKFDRCNNLRMNNMNFINSPQ--------------------THVTVM-GCIGVEFGFLSIQAPGTSPNTDGIHIQASSN 214 (226)
Q Consensus 156 ~i~~~~~~nv~i~~i~i~ns~~--------------------~~i~~~-~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~ 214 (226)
.+.+ .+++++++||+|+|+.. -.+.+. .+++..+.+|++... -|.+-.....+
T Consensus 116 Tv~V-~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~-----QDTLy~~~~gr 189 (364)
T 3uw0_A 116 TVLV-NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGY-----QDTLYSKTGSR 189 (364)
T ss_dssp SEEE-CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECS-----BSCEEECTTCE
T ss_pred EEEE-ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEec-----ccceEeCCCCC
Confidence 4555 48999999999999842 234444 589999999999984 47777764467
Q ss_pred EEEEeeEEec
Q 047411 215 VYIHNAHISN 224 (226)
Q Consensus 215 v~I~n~~i~~ 224 (226)
..+++|+|+.
T Consensus 190 ~yf~~c~I~G 199 (364)
T 3uw0_A 190 SYFSDCEISG 199 (364)
T ss_dssp EEEESCEEEE
T ss_pred EEEEcCEEEc
Confidence 7888888873
No 25
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=98.61 E-value=2.5e-07 Score=80.11 Aligned_cols=113 Identities=19% Similarity=0.277 Sum_probs=83.8
Q ss_pred cEEEEEe--eEEEeeCCCCCcCCC-----CCc-ceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEE
Q 047411 86 DITIMLS--GSIIAPNGPNEWKED-----DKS-KWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVL 157 (226)
Q Consensus 86 ~v~l~~~--g~l~~~~~~~~~~~~-----~~~-~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i 157 (226)
+++|... |+|..... .-|... ..+ .++.+.+++|++|+|--+.+.. . ..+
T Consensus 69 nv~I~G~~gG~IdG~G~-~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp---~------------------~~i 126 (339)
T 2iq7_A 69 NININGASGHSIDCQGS-RWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP---V------------------QAF 126 (339)
T ss_dssp SCEEEECTTCEEECCGG-GTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS---S------------------CCE
T ss_pred cEEEEcCCCCEEECCcc-cccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC---c------------------ceE
Confidence 8888886 68764321 223210 112 3788888999999994222211 1 248
Q ss_pred EEeecCcEEEeeeEEeCCCc--------eEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEecC
Q 047411 158 KFDRCNNLRMNNMNFINSPQ--------THVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225 (226)
Q Consensus 158 ~~~~~~nv~i~~i~i~ns~~--------~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~g 225 (226)
.+..|+|++|+++++.+++. -++++..|+||+|+|++|.+ ..|+|.+.+++||+|+||++..|
T Consensus 127 ~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~g 197 (339)
T 2iq7_A 127 SINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKN-----QDDCLAINSGTNITFTGGTCSGG 197 (339)
T ss_dssp EEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESS
T ss_pred EEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEec-----CCCEEEEcCCccEEEEeEEEECC
Confidence 89999999999999998642 25899999999999999986 46899999899999999998876
No 26
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=98.56 E-value=7.4e-07 Score=77.45 Aligned_cols=113 Identities=15% Similarity=0.218 Sum_probs=83.1
Q ss_pred cEEEEEe--eEEEeeCCCCCcCC--CC----Ccc-eEEE-e-CccceEEEeceEEeCCCcccccccccccccCCcccCCc
Q 047411 86 DITIMLS--GSIIAPNGPNEWKE--DD----KSK-WFDI-Q-SVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAP 154 (226)
Q Consensus 86 ~v~l~~~--g~l~~~~~~~~~~~--~~----~~~-~i~~-~-~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp 154 (226)
+++|..+ |+|..... .-|.. .+ .+| +|.+ . ..+|++|+|- +|... ..
T Consensus 70 ni~I~G~~~G~IdG~G~-~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~gi-ti~ns--------------------p~ 127 (349)
T 1hg8_A 70 NITITGASGHVIDGNGQ-AYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNL-NIQNW--------------------PV 127 (349)
T ss_dssp SCEEEECTTCEEECCGG-GTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESC-EEECC--------------------SS
T ss_pred cEEEEecCCCEEcCCcc-hhhhcccccCCCCCCCeEEEEeecCcCcEEEEEE-EEEcC--------------------CC
Confidence 8888883 78765321 22331 01 244 7778 6 6679999984 22211 11
Q ss_pred eEEEEeecCcEEEeeeEEeCCCc----------------eEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEEEE
Q 047411 155 TVLKFDRCNNLRMNNMNFINSPQ----------------THVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIH 218 (226)
Q Consensus 155 ~~i~~~~~~nv~i~~i~i~ns~~----------------~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~ 218 (226)
..+.+.+|++++|+++++.+++. -++++..|+||+|+|++|.+ ..|+|.+.+++||+|+
T Consensus 128 ~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~ 202 (349)
T 1hg8_A 128 HCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYN-----QDDCVAVTSGTNIVVS 202 (349)
T ss_dssp EEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEEC-----SSCSEEESSEEEEEEE
T ss_pred ceEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEec-----CCCeEEeeCCeEEEEE
Confidence 35889999999999999998642 25899999999999999986 4699999999999999
Q ss_pred eeEEecC
Q 047411 219 NAHISNG 225 (226)
Q Consensus 219 n~~i~~g 225 (226)
||++..|
T Consensus 203 n~~~~~g 209 (349)
T 1hg8_A 203 NMYCSGG 209 (349)
T ss_dssp EEEEESS
T ss_pred eEEEeCC
Confidence 9999876
No 27
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=98.56 E-value=6.3e-07 Score=78.61 Aligned_cols=114 Identities=12% Similarity=0.261 Sum_probs=82.8
Q ss_pred cEEEEEeeEEEeeCC-------CCCcCC----------CCCcceEEEeCccceEEEeceEEeCCCcccccccccccccCC
Q 047411 86 DITIMLSGSIIAPNG-------PNEWKE----------DDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEG 148 (226)
Q Consensus 86 ~v~l~~~g~l~~~~~-------~~~~~~----------~~~~~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~ 148 (226)
+++|...|+|..... ..-|.. .....+|.+.+++|++|+|- +|... ..|
T Consensus 110 ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~i-ti~ns--p~~----------- 175 (376)
T 1bhe_A 110 NSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNV-SLINS--PNF----------- 175 (376)
T ss_dssp SCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEE-EEECC--SSC-----------
T ss_pred eEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeE-EEECC--CcE-----------
Confidence 888887788876432 122321 01134889999999999983 33211 112
Q ss_pred cccCCceEEEEeecCcEEEeeeEEeCCC----ceEEEEeCeeeEEEEeEEEECCCCCCCCCeEEec------CeecEEEE
Q 047411 149 CVKLAPTVLKFDRCNNLRMNNMNFINSP----QTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQ------ASSNVYIH 218 (226)
Q Consensus 149 ~~~~rp~~i~~~~~~nv~i~~i~i~ns~----~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~------~s~~v~I~ 218 (226)
.+.+..|++++|+++++.++. .-++++..|++|+|+|++|.+ ..|+|-+. .|+||+|+
T Consensus 176 -------~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiks~~~~~~s~nI~I~ 243 (376)
T 1bhe_A 176 -------HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIAT-----GDDNVAIKAYKGRAETRNISIL 243 (376)
T ss_dssp -------SEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEEC-----SSCSEEEEECTTSCCEEEEEEE
T ss_pred -------EEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEec-----CCCeEEEcccCCCCCceEEEEE
Confidence 377888999999999999853 236899999999999999986 45888887 59999999
Q ss_pred eeEEecC
Q 047411 219 NAHISNG 225 (226)
Q Consensus 219 n~~i~~g 225 (226)
||++..|
T Consensus 244 n~~~~~g 250 (376)
T 1bhe_A 244 HNDFGTG 250 (376)
T ss_dssp EEEECSS
T ss_pred eeEEEcc
Confidence 9998764
No 28
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=98.53 E-value=2.7e-06 Score=75.18 Aligned_cols=168 Identities=15% Similarity=0.133 Sum_probs=92.9
Q ss_pred ccccceEEeeecCcc-CCCCcchHH-HHHHHHHHhcccCCCCCEEEecCCCeEE--E-----eeeeeeCCCcC----ccE
Q 047411 21 RINADEFNVLDFGAA-GDGNADDSM-AFIKAWNNTCSATAKSPTMVIPKGKTFL--V-----HPITFTGPCKS----SDI 87 (226)
Q Consensus 21 ~~~~~~~~v~dyGA~-~dg~~ddt~-aiq~Ai~~a~~~~g~g~~v~iP~G~tY~--~-----~~l~l~~~~ks----~~v 87 (226)
.+.+.++.|..-|-. ++|.+-.+| .||+|++ ++++ |.+|+|.+| +|. + ..+.+. |+ ..+
T Consensus 11 ~~~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~-~a~p---GdtI~l~~G-tY~~~~~e~~~~~i~~~---~sGt~~~pI 82 (400)
T 1ru4_A 11 ISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMA-AVNP---GELILLKPG-TYTIPYTQGKGNTITFN---KSGKDGAPI 82 (400)
T ss_dssp CCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHH-HCCT---TCEEEECSE-EEECCCBTTBCCCEEEC---CCCBTTBCE
T ss_pred ccCccEEEEcCCCCCCCCCccccCCccHHHHHh-hCCC---CCEEEECCC-eEccccccccceeEEec---CCCCCCCCE
Confidence 456778888765532 233122222 7999995 5555 889999999 998 2 345553 22 147
Q ss_pred EEEEee----EEEeeCCC-CCcCCCCCcceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeec
Q 047411 88 TIMLSG----SIIAPNGP-NEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRC 162 (226)
Q Consensus 88 ~l~~~g----~l~~~~~~-~~~~~~~~~~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~ 162 (226)
+|+-.+ +|. .... ..|.. ....|.+. .++++|+|. +|...|. ..|.+..
T Consensus 83 ti~~~~g~~~vI~-~~~~~g~~~~--~~~~i~i~-~~~~~i~gl-~I~n~g~--------------------~GI~v~g- 136 (400)
T 1ru4_A 83 YVAAANCGRAVFD-FSFPDSQWVQ--ASYGFYVT-GDYWYFKGV-EVTRAGY--------------------QGAYVIG- 136 (400)
T ss_dssp EEEEGGGCCEEEE-CCCCTTCCCT--TCCSEEEC-SSCEEEESE-EEESCSS--------------------CSEEECS-
T ss_pred EEEEecCCCCEEe-CCccCCcccc--ceeEEEEE-CCeEEEEeE-EEEeCCC--------------------CcEEEeC-
Confidence 776641 333 1110 01100 01335553 467777772 4432221 1355554
Q ss_pred CcEEEeeeEEeCCCceEEEEeCee-eEEEEeEEEECCCC----CCCCCeEEecCe--ecEEEEeeEE
Q 047411 163 NNLRMNNMNFINSPQTHVTVMGCI-GVEFGFLSIQAPGT----SPNTDGIHIQAS--SNVYIHNAHI 222 (226)
Q Consensus 163 ~nv~i~~i~i~ns~~~~i~~~~s~-~v~i~~~~i~~~~~----~~ntDGi~~~~s--~~v~I~n~~i 222 (226)
.+.+|+++++.+...-++.+.... +.+|+++++....+ ..+.|||.+..+ +...|++|.+
T Consensus 137 s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~ 203 (400)
T 1ru4_A 137 SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRA 203 (400)
T ss_dssp SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEE
T ss_pred CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEE
Confidence 667788888887766567776543 66777777776432 134566655432 3444444443
No 29
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=98.51 E-value=6.9e-07 Score=77.34 Aligned_cols=113 Identities=19% Similarity=0.283 Sum_probs=82.9
Q ss_pred cEEEEEe--eEEEeeCCCCCcCCC-----CCc-ceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEE
Q 047411 86 DITIMLS--GSIIAPNGPNEWKED-----DKS-KWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVL 157 (226)
Q Consensus 86 ~v~l~~~--g~l~~~~~~~~~~~~-----~~~-~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i 157 (226)
+++|... |+|..... .-|... ..+ .++.+.+++|++|+|- +|.... . ..+
T Consensus 73 nv~I~G~~gG~IdG~G~-~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i-~i~nsp--~------------------~~i 130 (339)
T 1ia5_A 73 DLTITGASGHSINGDGS-RWWDGEGGNGGKTKPKFFAAHSLTNSVISGL-KIVNSP--V------------------QVF 130 (339)
T ss_dssp SCEEEECTTCEEECCGG-GTCSSCTTTSSSCCCCCEEEEEEEEEEEESC-EEECCS--S------------------CCE
T ss_pred cEEEEcCCCeEEeCCCC-ccccccccCCCCCCCeEEEEeecCcEEEEEE-EEEcCC--c------------------ceE
Confidence 8888876 57764321 223311 112 3788888999999984 332111 1 248
Q ss_pred EEeecCcEEEeeeEEeCCC--------ceEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEecC
Q 047411 158 KFDRCNNLRMNNMNFINSP--------QTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225 (226)
Q Consensus 158 ~~~~~~nv~i~~i~i~ns~--------~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~g 225 (226)
.+..|+|++|+++++.+++ .-++++..|++|+|+|++|.+ ..|+|.+.+++||+|+||++..|
T Consensus 131 ~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~g 201 (339)
T 1ia5_A 131 SVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYN-----QDDCVAVNSGENIYFSGGYCSGG 201 (339)
T ss_dssp EEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESS
T ss_pred EEecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEc-----CCCeEEEeCCeEEEEEeEEEECC
Confidence 8899999999999999853 235899999999999999986 46899998889999999998865
No 30
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=98.46 E-value=1.2e-06 Score=75.77 Aligned_cols=112 Identities=18% Similarity=0.329 Sum_probs=82.7
Q ss_pred cEEEEEe--eEEEeeCCCCCcCCC-----CCc-ceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEE
Q 047411 86 DITIMLS--GSIIAPNGPNEWKED-----DKS-KWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVL 157 (226)
Q Consensus 86 ~v~l~~~--g~l~~~~~~~~~~~~-----~~~-~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i 157 (226)
+++|... |+|..... ..|... ..+ .++.+.+++|++|+|- +|... .. ..+
T Consensus 69 nv~I~G~~gG~IdG~G~-~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i-~i~ns--p~------------------~~i 126 (336)
T 1nhc_A 69 DLTVTMADGAVIDGDGS-RWWDSKGTNGGKTKPKFMYIHDVEDSTFKGI-NIKNT--PV------------------QAI 126 (336)
T ss_dssp SCEEEECTTCEEECCGG-GTCCSCTTTSSSCCCCCEEEEEEEEEEEESC-EEECC--SS------------------CCE
T ss_pred CEEEEcCCCeEEECCcc-ccccccCcCCCCCCceEEEEeeeCcEEEEEE-EEEeC--Cc------------------cEE
Confidence 8888886 68865321 223311 112 3788888999999984 33211 11 138
Q ss_pred EEeecCcEEEeeeEEeCCC--------ceEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEecC
Q 047411 158 KFDRCNNLRMNNMNFINSP--------QTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225 (226)
Q Consensus 158 ~~~~~~nv~i~~i~i~ns~--------~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~g 225 (226)
.+. |+|++|+++++.+++ .-++++..|+||+|+|++|.+ ..|+|.+.+++||+|+||++..|
T Consensus 127 ~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~g 196 (336)
T 1nhc_A 127 SVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKN-----QDDCIAINSGESISFTGGTCSGG 196 (336)
T ss_dssp EEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEES-----SSEEEEESSEEEEEEESCEEESS
T ss_pred EEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEc-----CCCEEEEeCCeEEEEEeEEEECC
Confidence 888 999999999999864 235899999999999999986 46899998889999999998865
No 31
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=98.41 E-value=6.7e-07 Score=80.15 Aligned_cols=92 Identities=11% Similarity=0.243 Sum_probs=67.0
Q ss_pred ceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCC--ceEEEEeCeeeE
Q 047411 111 KWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSP--QTHVTVMGCIGV 188 (226)
Q Consensus 111 ~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~--~~~i~~~~s~~v 188 (226)
.+|.+.+++|++|+|--..+. ..| .+.+..|+|++|+++++.++. .-++++..|+||
T Consensus 191 ~~i~~~~~~nv~i~giti~ns---p~~------------------~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV 249 (448)
T 3jur_A 191 SFVQFYRCRNVLVEGVKIINS---PMW------------------CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYM 249 (448)
T ss_dssp CSEEEESCEEEEEESCEEESC---SSC------------------SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEE
T ss_pred eEEEEEcccceEEEeeEEEeC---CCc------------------eEeeeccCCEEEEeEEEeeccCCCccccccCCcCE
Confidence 389999999999999432221 122 388889999999999999852 235888999999
Q ss_pred EEEeEEEECCCC------CCCCCeEEecC-eecEEEEeeEEe
Q 047411 189 EFGFLSIQAPGT------SPNTDGIHIQA-SSNVYIHNAHIS 223 (226)
Q Consensus 189 ~i~~~~i~~~~~------~~ntDGi~~~~-s~~v~I~n~~i~ 223 (226)
+|+|++|.+..+ ..+.||+++.. |+||+|+||++.
T Consensus 250 ~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~ 291 (448)
T 3jur_A 250 LIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVI 291 (448)
T ss_dssp EEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEE
T ss_pred EEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEe
Confidence 999999987321 12234444332 899999999983
No 32
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=98.40 E-value=1.5e-06 Score=79.69 Aligned_cols=132 Identities=12% Similarity=0.213 Sum_probs=73.7
Q ss_pred CCE-EEecCCCeEEEeeeeeeCCCcCccEEEEEeeEEEeeCCC------CCcCC--CCCcceEEE------eCccceEEE
Q 047411 60 SPT-MVIPKGKTFLVHPITFTGPCKSSDITIMLSGSIIAPNGP------NEWKE--DDKSKWFDI------QSVDSLQID 124 (226)
Q Consensus 60 g~~-v~iP~G~tY~~~~l~l~~~~ks~~v~l~~~g~l~~~~~~------~~~~~--~~~~~~i~~------~~~~nv~I~ 124 (226)
+.+ +++++| .|+.+++.+...+ . +++|...|+|.+.... ..|.. ......+.+ .+++|++|+
T Consensus 222 ~~~~L~l~~G-A~L~gs~~~~~~~-~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I~ 298 (549)
T 1x0c_A 222 SVTWVYFAPG-AYVKGAVEFLSTA-S-EVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLN 298 (549)
T ss_dssp TCCEEEECTT-EEEESCEEECCCS-S-EEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEEE
T ss_pred CCCeEecCCC-CEEEEEEEEecCc-e-eEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEEE
Confidence 567 999999 8988888776322 3 8898777898764321 11210 000112333 788999999
Q ss_pred eceEEeCCCcccccccccccccCCcccCCceEEEEe-ec-Cc--EEEeeeEEeCCCce---EEEEeCeeeEEEEeEEEEC
Q 047411 125 GSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFD-RC-NN--LRMNNMNFINSPQT---HVTVMGCIGVEFGFLSIQA 197 (226)
Q Consensus 125 G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~-~~-~n--v~i~~i~i~ns~~~---~i~~~~s~~v~i~~~~i~~ 197 (226)
|-.+.+. .+|. +.+. .| ++ ++|+++++.+++.| ++.+. +||+|+|++|.+
T Consensus 299 Giti~Ns---p~w~------------------i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~ 355 (549)
T 1x0c_A 299 GVTVSAP---PFNS------------------MDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHT 355 (549)
T ss_dssp SCEEECC---SSCS------------------EEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEE
T ss_pred CcEEECC---Ccee------------------EEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeC
Confidence 9644432 2332 3322 23 46 66666666654433 23333 556666666654
Q ss_pred CCCCCCCCeEEecCeecEEEEeeEEe
Q 047411 198 PGTSPNTDGIHIQASSNVYIHNAHIS 223 (226)
Q Consensus 198 ~~~~~ntDGi~~~~s~~v~I~n~~i~ 223 (226)
..|+|-+.+ +||+|+||.+.
T Consensus 356 -----gDDcIaIks-~NI~I~n~~~~ 375 (549)
T 1x0c_A 356 -----DDDGLKMYY-SNVTARNIVMW 375 (549)
T ss_dssp -----SSCCEECCS-SSEEEEEEEEE
T ss_pred -----CCCEEEECC-CCEEEEeeEEE
Confidence 234555544 55555555554
No 33
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=98.37 E-value=7.1e-07 Score=82.93 Aligned_cols=95 Identities=8% Similarity=0.056 Sum_probs=73.4
Q ss_pred ceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeC--CC-ceEEEEeCeee
Q 047411 111 KWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFIN--SP-QTHVTVMGCIG 187 (226)
Q Consensus 111 ~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~n--s~-~~~i~~~~s~~ 187 (226)
.+|.+.+++|++|+|--..+. ..| .+.+.+|+|++|+++++.+ +| .-++++..|++
T Consensus 332 ~~i~~~~~~nv~I~giti~ns---~~~------------------~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~n 390 (608)
T 2uvf_A 332 SLMTLRGVENVYLAGFTVRNP---AFH------------------GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQN 390 (608)
T ss_dssp CSEEEESEEEEEEESCEEECC---SSC------------------SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEE
T ss_pred eEEEEEeeeeEEEeCcEEecC---CCC------------------EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCce
Confidence 479999999999999422221 122 4888999999999999876 22 34799999999
Q ss_pred EEEEeEEEECCCC------CCCCCeEEecCeecEEEEeeEEecCC
Q 047411 188 VEFGFLSIQAPGT------SPNTDGIHIQASSNVYIHNAHISNGT 226 (226)
Q Consensus 188 v~i~~~~i~~~~~------~~ntDGi~~~~s~~v~I~n~~i~~gD 226 (226)
|+|+|++|.+..+ ..+.||++...|+||+|+||++..|+
T Consensus 391 V~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~gh 435 (608)
T 2uvf_A 391 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGH 435 (608)
T ss_dssp EEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSS
T ss_pred EEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCC
Confidence 9999999997533 24567777667999999999998764
No 34
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=98.32 E-value=1.9e-06 Score=75.14 Aligned_cols=112 Identities=18% Similarity=0.308 Sum_probs=82.3
Q ss_pred cEEEEE--eeEEEeeCCCCCcCCC----CC-cceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEE
Q 047411 86 DITIML--SGSIIAPNGPNEWKED----DK-SKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLK 158 (226)
Q Consensus 86 ~v~l~~--~g~l~~~~~~~~~~~~----~~-~~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~ 158 (226)
+++|.. .|+|..... .-|... .. ..++.+.+++|++|+|- ++... ..| .+.
T Consensus 96 nv~I~G~~~g~IdG~G~-~~w~~~~~~~~~rP~~i~~~~~~nv~i~~i-ti~ns--p~~------------------~i~ 153 (362)
T 1czf_A 96 HITVTGASGHLINCDGA-RWWDGKGTSGKKKPKFFYAHGLDSSSITGL-NIKNT--PLM------------------AFS 153 (362)
T ss_dssp SCEEEECTTCEEECCGG-GTCCSCTTSSSCCCCCEEEEEEETEEEESC-EEECC--SSC------------------CEE
T ss_pred cEEEEcCCCcEEECCCc-hhhcccCCCCCCCCeEEEEeecccEEEEEE-EEecC--Ccc------------------EEE
Confidence 888888 377764321 223311 11 23788888999999983 33211 111 388
Q ss_pred EeecCcEEEeeeEEeCCC--------ceEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEecC
Q 047411 159 FDRCNNLRMNNMNFINSP--------QTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225 (226)
Q Consensus 159 ~~~~~nv~i~~i~i~ns~--------~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~g 225 (226)
+. |+|++|+++++.+++ .-++++..|+||+|+|++|.+ ..|+|-+.+++||+|+||++..|
T Consensus 154 i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~g 222 (362)
T 1czf_A 154 VQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHN-----QDDCLAVNSGENIWFTGGTCIGG 222 (362)
T ss_dssp EE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESS
T ss_pred Ee-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEec-----CCCEEEEeCCeEEEEEEEEEeCC
Confidence 88 999999999999853 235899999999999999997 46899998889999999998765
No 35
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.28 E-value=3.6e-06 Score=72.05 Aligned_cols=147 Identities=12% Similarity=0.107 Sum_probs=73.8
Q ss_pred hHHHHHHHHHHhcccCCCCC----EEEecCCCeEEEeeeeeeCCCcCccEEEEEee----EEEeeCCCC-CcCCCCCcce
Q 047411 42 DSMAFIKAWNNTCSATAKSP----TMVIPKGKTFLVHPITFTGPCKSSDITIMLSG----SIIAPNGPN-EWKEDDKSKW 112 (226)
Q Consensus 42 dt~aiq~Ai~~a~~~~g~g~----~v~iP~G~tY~~~~l~l~~~~ks~~v~l~~~g----~l~~~~~~~-~~~~~~~~~~ 112 (226)
+-..||+||+ +++. +. +|+|++| +|. ..+.++.. |. +++|+.++ +|....... .+. ....+.
T Consensus 14 ~f~TIq~AI~-aap~---~~~~~~~I~I~~G-~Y~-E~V~I~~~-k~-~Itl~G~g~~~tiI~~~~~~~~g~~-t~~sat 84 (317)
T 1xg2_A 14 DYQTLAEAVA-AAPD---KSKTRYVIYVKRG-TYK-ENVEVASN-KM-NLMIVGDGMYATTITGSLNVVDGST-TFRSAT 84 (317)
T ss_dssp SBSSHHHHHH-HSCS---SCSSCEEEEECSE-EEE-CCEEECTT-SC-SEEEEESCTTTEEEEECCCTTTTCC-SGGGCS
T ss_pred CcccHHHHHh-hccc---CCCceEEEEEcCC-EEe-eeeecCCC-CC-cEEEEEcCCCCcEEEecccccCCCc-ccceeE
Confidence 3345999995 5554 33 8999999 996 35555311 33 68887764 233221110 000 001234
Q ss_pred EEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEe
Q 047411 113 FDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGF 192 (226)
Q Consensus 113 i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~ 192 (226)
+.+. .++|++++- +|...+.. . .....+|.+ .++++.++++.|... +.++.....+. .+++
T Consensus 85 v~v~-a~~f~~~~l-t~~Nt~g~-----~---------~~qAvAl~v-~~d~~~f~~c~f~g~-QDTLy~~~~r~-~~~~ 145 (317)
T 1xg2_A 85 LAAV-GQGFILQDI-CIQNTAGP-----A---------KDQAVALRV-GADMSVINRCRIDAY-QDTLYAHSQRQ-FYRD 145 (317)
T ss_dssp EEEC-STTCEEESC-EEEECCCG-----G---------GCCCCSEEE-CCTTEEEESCEEECS-TTCEEECSSEE-EEES
T ss_pred EEEE-CCCEEEEEe-EEecccCC-----c---------cCceEEEEE-eCCcEEEEEeEeCcc-ccceeecCccE-EEEe
Confidence 4443 355555552 23221100 0 111224444 366667777777665 44555544433 6677
Q ss_pred EEEECCCCCCCCCeEEecCeecEEEEeeEEe
Q 047411 193 LSIQAPGTSPNTDGIHIQASSNVYIHNAHIS 223 (226)
Q Consensus 193 ~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~ 223 (226)
|.|.. +.|-|- +.-...+++|.|.
T Consensus 146 c~I~G-----~vDFIf--G~~~avf~~c~i~ 169 (317)
T 1xg2_A 146 SYVTG-----TVDFIF--GNAAVVFQKCQLV 169 (317)
T ss_dssp CEEEE-----SSSCEE--ECCEEEEESCEEE
T ss_pred eEEEe-----ceeEEc--CCceEEEeeeEEE
Confidence 77765 344433 1123666666665
No 36
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.28 E-value=7.8e-06 Score=70.03 Aligned_cols=147 Identities=15% Similarity=0.107 Sum_probs=72.5
Q ss_pred hHHHHHHHHHHhcccCCCCC----EEEecCCCeEEEeeeeeeCCCcCccEEEEEee---E-EEeeCCCC-CcCCCCCcce
Q 047411 42 DSMAFIKAWNNTCSATAKSP----TMVIPKGKTFLVHPITFTGPCKSSDITIMLSG---S-IIAPNGPN-EWKEDDKSKW 112 (226)
Q Consensus 42 dt~aiq~Ai~~a~~~~g~g~----~v~iP~G~tY~~~~l~l~~~~ks~~v~l~~~g---~-l~~~~~~~-~~~~~~~~~~ 112 (226)
+-..||+||+ +++. +. +|+|++| +|. ..+.++.. |. +++|+.++ + |....... .+. ....+.
T Consensus 18 ~f~TIq~AI~-aap~---~~~~~~~I~I~~G-~Y~-E~V~I~~~-k~-~Itl~G~g~~~tiI~~~~~~~~g~~-t~~sat 88 (319)
T 1gq8_A 18 DYKTVSEAVA-AAPE---DSKTRYVIRIKAG-VYR-ENVDVPKK-KK-NIMFLGDGRTSTIITASKNVQDGST-TFNSAT 88 (319)
T ss_dssp SBSSHHHHHH-HSCS---SCSSCEEEEECSE-EEE-CCEEECTT-CC-SEEEEESCTTTEEEEECCCTTTTCC-TGGGCS
T ss_pred CccCHHHHHH-hccc---cCCceEEEEEcCC-eEe-eeeeccCC-Cc-cEEEEEcCCCccEEEecccccCCCC-ccceEE
Confidence 3445999995 5554 33 8999999 996 35555311 33 67777663 2 32221110 000 001234
Q ss_pred EEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEe
Q 047411 113 FDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGF 192 (226)
Q Consensus 113 i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~ 192 (226)
+.+. .++|++++- +|...+.. . .....+|.+ .++++.++++.|... +.++.....+ ..+++
T Consensus 89 v~v~-a~~f~~~nl-t~~Nt~g~-----~---------~~qAvAl~v-~~d~~~f~~c~f~g~-QDTLy~~~~r-~~~~~ 149 (319)
T 1gq8_A 89 VAAV-GAGFLARDI-TFQNTAGA-----A---------KHQAVALRV-GSDLSAFYRCDILAY-QDSLYVHSNR-QFFIN 149 (319)
T ss_dssp EEEC-STTCEEEEE-EEEECCCG-----G---------GCCCCSEEE-CCTTEEEEEEEEECS-TTCEEECSSE-EEEES
T ss_pred EEEE-CCCEEEEEe-EeEccCCC-----c---------CCceEEEEe-cCCcEEEEEeEECcc-ceeeeecCcc-EEEEe
Confidence 4444 355555552 23221100 0 111223444 366666666666655 3355554443 36666
Q ss_pred EEEECCCCCCCCCeEEecCeecEEEEeeEEe
Q 047411 193 LSIQAPGTSPNTDGIHIQASSNVYIHNAHIS 223 (226)
Q Consensus 193 ~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~ 223 (226)
|.|.. +.|-|-= .-...+++|.|.
T Consensus 150 c~I~G-----~vDFIfG--~~~a~f~~c~i~ 173 (319)
T 1gq8_A 150 CFIAG-----TVDFIFG--NAAVVLQDCDIH 173 (319)
T ss_dssp CEEEE-----SSSCEEE--SCEEEEESCEEE
T ss_pred cEEEe-----eeeEEec--CCcEEEEeeEEE
Confidence 66665 3444431 123666666664
No 37
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=98.27 E-value=5.8e-06 Score=73.53 Aligned_cols=88 Identities=9% Similarity=0.219 Sum_probs=67.9
Q ss_pred ceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCC---CceEEEEeCeee
Q 047411 111 KWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINS---PQTHVTVMGCIG 187 (226)
Q Consensus 111 ~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns---~~~~i~~~~s~~ 187 (226)
.++.+.+++|++|+|- +|... ..| .+.+..|+|++|+|+++.+. ..-++++.. +|
T Consensus 128 ~~i~~~~~~nv~I~~i-ti~ns--p~~------------------~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~-~n 185 (422)
T 1rmg_A 128 RILRLTDVTHFSVHDI-ILVDA--PAF------------------HFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG-SN 185 (422)
T ss_dssp EEEEEEEEEEEEEEEE-EEECC--SSC------------------SEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE-EE
T ss_pred eEEEEcccceEEEECe-EEECC--Cce------------------EEEEeCcCCEEEEeEEEECCCCCCCccEeecC-Ce
Confidence 4788888999999984 33211 111 38889999999999999972 234678887 99
Q ss_pred EEEEeEEEECCCCCCCCCeEEecC-eecEEEEeeEEecC
Q 047411 188 VEFGFLSIQAPGTSPNTDGIHIQA-SSNVYIHNAHISNG 225 (226)
Q Consensus 188 v~i~~~~i~~~~~~~ntDGi~~~~-s~~v~I~n~~i~~g 225 (226)
|+|+|+.|.+ ..|+|-+.+ |+||+|+||++..|
T Consensus 186 V~I~n~~i~~-----gDD~Iai~s~~~nI~I~n~~~~~~ 219 (422)
T 1rmg_A 186 IWVHDVEVTN-----KDECVTVKSPANNILVESIYCNWS 219 (422)
T ss_dssp EEEEEEEEES-----SSEEEEEEEEEEEEEEEEEEEESS
T ss_pred EEEEeeEEeC-----CCCeEEeCCCCcCEEEEeEEEcCC
Confidence 9999999986 458999987 89999999987654
No 38
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.20 E-value=3.2e-05 Score=67.15 Aligned_cols=69 Identities=17% Similarity=0.231 Sum_probs=37.7
Q ss_pred EEEEeecCcEEEeeeEEeCC----Cce-----------EEEEeCeeeEEEEeEEEECCCC---------C---CCCCe-E
Q 047411 156 VLKFDRCNNLRMNNMNFINS----PQT-----------HVTVMGCIGVEFGFLSIQAPGT---------S---PNTDG-I 207 (226)
Q Consensus 156 ~i~~~~~~nv~i~~i~i~ns----~~~-----------~i~~~~s~~v~i~~~~i~~~~~---------~---~ntDG-i 207 (226)
.|.+.+++||.|++|+|++. |.| .+.+..+++|.|++|++....+ . .-.|| +
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 35555666677777766643 111 4566666677777776664210 0 01344 3
Q ss_pred Eec-CeecEEEEeeEEec
Q 047411 208 HIQ-ASSNVYIHNAHISN 224 (226)
Q Consensus 208 ~~~-~s~~v~I~n~~i~~ 224 (226)
|+. .|++|+|.+|+|..
T Consensus 177 Di~~~s~~VTiS~n~f~~ 194 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFEL 194 (355)
T ss_pred eeecCCCcEEEEeeEEcC
Confidence 443 46666666666653
No 39
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.19 E-value=1.7e-05 Score=68.76 Aligned_cols=168 Identities=8% Similarity=0.041 Sum_probs=94.5
Q ss_pred ccceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEe-cCCCeEEE-eeeeeeCCCcCccEEEEEee---EEEe
Q 047411 23 NADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVI-PKGKTFLV-HPITFTGPCKSSDITIMLSG---SIIA 97 (226)
Q Consensus 23 ~~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~i-P~G~tY~~-~~l~l~~~~ks~~v~l~~~g---~l~~ 97 (226)
.++++.|+..-.. ....-.-.|+.|+. +. + ..+|+| ..| ++.+ ++|.+ .+ ++||...| +|..
T Consensus 37 gG~v~~VT~~~d~--~~~~~~GsLr~av~-~~---~-P~~Ivf~~~g-~I~l~~~l~V----~s-n~TI~G~ga~~~i~G 103 (346)
T 1pxz_A 37 GGDFYTVTSTDDN--PVNPTPGTLRYGAT-RE---K-ALWIIFSQNM-NIKLKMPLYV----AG-HKTIDGRGADVHLGN 103 (346)
T ss_dssp TSEEEEECCCCCC--TTSCCTTSHHHHHH-CS---S-CEEEEESSCE-EECCSSCEEC----CS-SEEEECTTSCEEEET
T ss_pred CccEEEECChHHc--ccccCcchhHHHhc-cC---C-CeEEEEcCCc-EEecCccEEe----cC-CeEEEccCCceEEeC
Confidence 3567777743211 00001123888984 32 2 345555 557 7776 47776 36 88886542 2320
Q ss_pred eCCCCCcCCCCCcceEEEeCccceEEEeceEEeCCCc----ccccccccccccCCcccCCceEEEEeecCcEEEeeeEEe
Q 047411 98 PNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGK----AWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFI 173 (226)
Q Consensus 98 ~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~idG~G~----~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ 173 (226)
....|.+.+++||.|++.-+-+..-. -|........... ....-.|.+..++++.|+.++|.
T Consensus 104 -----------~G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~---~~~~DaI~i~~s~nVwIDHcs~s 169 (346)
T 1pxz_A 104 -----------GGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVH---AQDGDAITMRNVTNAWIDHNSLS 169 (346)
T ss_dssp -----------TSCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEEC---CCCCCSEEEESCEEEEEESCEEE
T ss_pred -----------CcceEEEEccCCEEEEeeEEEeeccCCCceEEeccCccccccc---CCCCCEEEEecCceEEEEeeEEe
Confidence 12356666788888888533222100 0011000000000 12334688888999999999999
Q ss_pred CCCceEEEE-eCeeeEEEEeEEEECCCCCCCCCeEEecCe--------ecEEEEeeEE
Q 047411 174 NSPQTHVTV-MGCIGVEFGFLSIQAPGTSPNTDGIHIQAS--------SNVYIHNAHI 222 (226)
Q Consensus 174 ns~~~~i~~-~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s--------~~v~I~n~~i 222 (226)
+...-.+.+ ..+++|+|+++.+.... .|+.+.++ .+|+++++++
T Consensus 170 ~~~Dg~id~~~~s~~vTISnn~f~~H~-----k~~l~G~sd~~~~d~~~~vT~~~N~f 222 (346)
T 1pxz_A 170 DCSDGLIDVTLGSTGITISNNHFFNHH-----KVMLLGHDDTYDDDKSMKVTVAFNQF 222 (346)
T ss_dssp CCSSEEEEEESSCEEEEEESCEEESEE-----EEEEESCCSSCGGGGGCEEEEESCEE
T ss_pred cCCCCcEeeccCcceEEEEeeEEecCC-----ceeEECCCCccccCCceEEEEEeeEE
Confidence 886655556 58899999999998632 33433332 3788998888
No 40
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=98.19 E-value=4.2e-06 Score=72.29 Aligned_cols=111 Identities=12% Similarity=0.089 Sum_probs=79.8
Q ss_pred cEEEEEe-eEEEeeCCCCCcCCC-----CCc-ceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEE
Q 047411 86 DITIMLS-GSIIAPNGPNEWKED-----DKS-KWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLK 158 (226)
Q Consensus 86 ~v~l~~~-g~l~~~~~~~~~~~~-----~~~-~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~ 158 (226)
+++|..+ |+|-.... .-|... ..+ .++.+.+.+ ++|+|- ++.-. ..| .+.
T Consensus 67 ni~I~G~~G~idG~G~-~ww~~~~~~~~~~rP~~i~~~~~~-v~i~gi-ti~ns--p~~------------------~i~ 123 (335)
T 1k5c_A 67 GINFVGADHIFDGNGA-LYWDGKGTNNGTHKPHPFLKIKGS-GTYKKF-EVLNS--PAQ------------------AIS 123 (335)
T ss_dssp EEEEECTTCEEECCGG-GTCCSCTTTSSSCCCCCSEEEEEE-EEEESC-EEESC--SSC------------------CEE
T ss_pred CEEEEeCccEEcCChh-HhhhcccccCCCCCCeEEEEeceE-EEEEEE-EEECC--Ccc------------------eEE
Confidence 8888884 88865321 223211 112 367787777 999983 33211 112 388
Q ss_pred EeecCc-EEEeeeEEeCCCc---------eEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEecC
Q 047411 159 FDRCNN-LRMNNMNFINSPQ---------THVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISNG 225 (226)
Q Consensus 159 ~~~~~n-v~i~~i~i~ns~~---------~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~g 225 (226)
+..|+| ++|+++++.+++. -++++ .|+||+|+|+.|.+ ..|.|-+.+++||+|+||++..|
T Consensus 124 i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~g 194 (335)
T 1k5c_A 124 VGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKN-----QDDCIAINDGNNIRFENNQCSGG 194 (335)
T ss_dssp EEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEES-----SSCSEEEEEEEEEEEESCEEESS
T ss_pred EEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEc-----CCCEEEeeCCeeEEEEEEEEECC
Confidence 999999 9999999998631 24888 99999999999997 46899998889999999998865
No 41
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.13 E-value=3.6e-05 Score=66.37 Aligned_cols=144 Identities=15% Similarity=0.114 Sum_probs=88.1
Q ss_pred HHHHHHHhcccCCCCCEEEecCCCeEEEe---eeeeeCCCcCccEEEEEeeE--EEeeCCCCCcCCCCCcceEEEeCccc
Q 047411 46 FIKAWNNTCSATAKSPTMVIPKGKTFLVH---PITFTGPCKSSDITIMLSGS--IIAPNGPNEWKEDDKSKWFDIQSVDS 120 (226)
Q Consensus 46 iq~Ai~~a~~~~g~g~~v~iP~G~tY~~~---~l~l~~~~ks~~v~l~~~g~--l~~~~~~~~~~~~~~~~~i~~~~~~n 120 (226)
|++|+. +. +..+++-.| ++.+. +|.+ +| ++||...+. |. +..|.+.+++|
T Consensus 38 Lr~al~----~~--~PriIvv~G-~I~~~~~~~l~v----~s-nkTI~G~ga~~I~-------------G~Gi~I~~a~N 92 (340)
T 3zsc_A 38 LEKYTT----AE--GKYVIVVDG-TIVFEPKREIKV----LS-DKTIVGINDAKIV-------------GGGLVIKDAQN 92 (340)
T ss_dssp HHHHHT----SS--SCEEEEEEE-EEEEEEEEEEEE----CS-SEEEEEEEEEEEE-------------EEEEEEESCEE
T ss_pred HHHHHh----CC--CCEEEEECc-EEEeCCcceEEe----cC-CCEEEeccCcEEe-------------cCceEEEcCce
Confidence 777773 22 334455689 88765 5666 46 888876532 22 23466777888
Q ss_pred eEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCceEEEEe-CeeeEEEEeEEEECCC
Q 047411 121 LQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVM-GCIGVEFGFLSIQAPG 199 (226)
Q Consensus 121 v~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~-~s~~v~i~~~~i~~~~ 199 (226)
|.|+.--+-++.-..-|. .. ....-.|.+..++|+.|+.++|.....-.+.+. .+++|+|+++.+....
T Consensus 93 VIIrnl~i~~~~~~~~~~--~~--------~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~ 162 (340)
T 3zsc_A 93 VIIRNIHFEGFYMEDDPR--GK--------KYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHD 162 (340)
T ss_dssp EEEESCEEECCCCTTCTT--SC--------SSCCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCS
T ss_pred EEEeCeEEECCccccCcc--CC--------cCCCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCc
Confidence 888885332222110011 00 123346888889999999999998876667776 5899999999998753
Q ss_pred CC---CCCCeEE---ecCeecEEEEeeEEec
Q 047411 200 TS---PNTDGIH---IQASSNVYIHNAHISN 224 (226)
Q Consensus 200 ~~---~ntDGi~---~~~s~~v~I~n~~i~~ 224 (226)
.. ...|+-. ..+..+|+++++++..
T Consensus 163 k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~ 193 (340)
T 3zsc_A 163 KVSLVGSSDKEDPEQAGQAYKVTYHHNYFKN 193 (340)
T ss_dssp BCCEECCCTTSCHHHHHHSCEEEEESCEEES
T ss_pred eeeEeCcCCCCccccccCCcEEEEECeEecC
Confidence 21 1222210 0112479999998863
No 42
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=98.00 E-value=2.9e-05 Score=67.16 Aligned_cols=61 Identities=8% Similarity=0.138 Sum_probs=43.8
Q ss_pred EEEEeecCcEEEeeeEEeCCCc------------------e--EEE-EeCeeeEEEEeEEEECCCCCCCCCeEEecCeec
Q 047411 156 VLKFDRCNNLRMNNMNFINSPQ------------------T--HVT-VMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSN 214 (226)
Q Consensus 156 ~i~~~~~~nv~i~~i~i~ns~~------------------~--~i~-~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~ 214 (226)
.+.+. +++++++||+|+|+.. . .+. -..++++.+++|++.+. -|.+-.... +
T Consensus 90 tv~v~-a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~-----QDTLy~~~g-r 162 (342)
T 2nsp_A 90 TITIS-AKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGY-----QATLYVSGG-R 162 (342)
T ss_dssp SEEEC-SBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECS-----TTCEEECSS-E
T ss_pred EEEEE-CCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecc-----cceEEECCC-C
Confidence 45554 8999999999999741 1 232 25688999999999974 466766653 5
Q ss_pred EEEEeeEEe
Q 047411 215 VYIHNAHIS 223 (226)
Q Consensus 215 v~I~n~~i~ 223 (226)
..+++|+|+
T Consensus 163 ~~~~~c~I~ 171 (342)
T 2nsp_A 163 SFFSDCRIS 171 (342)
T ss_dssp EEEESCEEE
T ss_pred EEEEcCEEE
Confidence 777777776
No 43
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.99 E-value=7.6e-05 Score=64.00 Aligned_cols=69 Identities=12% Similarity=0.181 Sum_probs=52.3
Q ss_pred EEEEeecCcEEEeeeEEeCCCce---EEEEeC-eeeEEEEeEEEECCC----CCCCCCe-EEec-CeecEEEEeeEEec
Q 047411 156 VLKFDRCNNLRMNNMNFINSPQT---HVTVMG-CIGVEFGFLSIQAPG----TSPNTDG-IHIQ-ASSNVYIHNAHISN 224 (226)
Q Consensus 156 ~i~~~~~~nv~i~~i~i~ns~~~---~i~~~~-s~~v~i~~~~i~~~~----~~~ntDG-i~~~-~s~~v~I~n~~i~~ 224 (226)
.|.+.+++||.|++++|++...| .+.+.. +++|.|++|.+.... +..-.|| +|+. .+++|+|.+|+|..
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~ 174 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFEN 174 (326)
T ss_dssp CEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEE
T ss_pred EEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEec
Confidence 37777899999999999987543 588886 899999999997421 1123465 4664 58999999999863
No 44
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=97.88 E-value=0.00011 Score=63.19 Aligned_cols=69 Identities=14% Similarity=0.141 Sum_probs=49.6
Q ss_pred EEEEe-ecCcEEEeeeEEeCCC----ceEEEEe-----CeeeEEEEeEEEECCCC------CCCCCe-EEec-CeecEEE
Q 047411 156 VLKFD-RCNNLRMNNMNFINSP----QTHVTVM-----GCIGVEFGFLSIQAPGT------SPNTDG-IHIQ-ASSNVYI 217 (226)
Q Consensus 156 ~i~~~-~~~nv~i~~i~i~ns~----~~~i~~~-----~s~~v~i~~~~i~~~~~------~~ntDG-i~~~-~s~~v~I 217 (226)
.|.+. +++||.|++|+|++.+ .-.+.+. .+++|.|++|.+....+ ..-.|| +|+. .+++|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 57777 8899999999998775 2357777 58999999999974321 111255 4654 5889999
Q ss_pred EeeEEec
Q 047411 218 HNAHISN 224 (226)
Q Consensus 218 ~n~~i~~ 224 (226)
.+|+|..
T Consensus 167 Snn~f~~ 173 (330)
T 2qy1_A 167 SYNYVYN 173 (330)
T ss_dssp ESCEEEE
T ss_pred Ecceecc
Confidence 9998864
No 45
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=97.87 E-value=0.00041 Score=58.49 Aligned_cols=158 Identities=17% Similarity=0.251 Sum_probs=96.1
Q ss_pred cceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCCCeEEEeeeeeeCCCcCccEEEEEe--eEEEeeCCC
Q 047411 24 ADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVHPITFTGPCKSSDITIMLS--GSIIAPNGP 101 (226)
Q Consensus 24 ~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~~l~l~~~~ks~~v~l~~~--g~l~~~~~~ 101 (226)
+++..+.+|||.++-.+||+++|.+.++ . -..|.+|.| .|..+-+.+ + ...|+.. |+|+.-+..
T Consensus 62 arvls~k~fga~~~~~~d~~~~~~~sl~-s------~~~v~i~~g-vf~ss~i~~-----~-~c~l~g~g~g~~~~~~~~ 127 (542)
T 2x3h_A 62 ARVLTSKPFGAAGDATTDDTEVIAASLN-S------QKAVTISDG-VFSSSGINS-----N-YCNLDGRGSGVLSHRSST 127 (542)
T ss_dssp HHBCBSSCTTCCCBSSSCCHHHHHHHHT-S------SSCEECCSE-EEEECCEEE-----S-CCEEECTTTEEEEECSSS
T ss_pred heeeecccccccCCcccCcHHHHHhhhc-c------cccEecccc-ccccccccc-----c-cccccccCCceeeeecCC
Confidence 5677889999999999999999999994 1 236999999 999887777 3 6677665 687643222
Q ss_pred CCcCCCCCcceEEEe-----CccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCC
Q 047411 102 NEWKEDDKSKWFDIQ-----SVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSP 176 (226)
Q Consensus 102 ~~~~~~~~~~~i~~~-----~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~ 176 (226)
. ..+.|. ..++++|.| |-.. + ....+-+.|..-.+++++++.|.|..
T Consensus 128 g--------n~lvfn~p~~g~ls~~ti~~------nk~~------------d--s~qg~qvs~~gg~dvsv~~i~fsn~~ 179 (542)
T 2x3h_A 128 G--------NYLVFNNPRTGRLSNITVES------NKAT------------D--TTQGQQVSLAGGSDVTVSDVNFSNVK 179 (542)
T ss_dssp S--------CCEEEESCEEEEEEEEEEEC------CCSS------------T--TCBCCSEEEESCEEEEEEEEEEEEEC
T ss_pred C--------CEEEEeCCCCcceeeEEEec------ccCC------------c--cccceEEEecCCCcceEeeeeeeecC
Confidence 1 112221 245666655 2110 0 11223467777778888888877766
Q ss_pred ceEEEEeC------eeeEEEEeEEEECCCCCCC-CCeEE-ecCeecEEEEeeEEe
Q 047411 177 QTHVTVMG------CIGVEFGFLSIQAPGTSPN-TDGIH-IQASSNVYIHNAHIS 223 (226)
Q Consensus 177 ~~~i~~~~------s~~v~i~~~~i~~~~~~~n-tDGi~-~~~s~~v~I~n~~i~ 223 (226)
.-++.+.. -++..|++++-.-...+.| .-|.- .++|.|-.|+++.-+
T Consensus 180 g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~ 234 (542)
T 2x3h_A 180 GTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAK 234 (542)
T ss_dssp SBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEE
T ss_pred CCceeEEEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhh
Confidence 55554431 2345566666554433333 22322 245666666665543
No 46
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.78 E-value=8.6e-05 Score=64.56 Aligned_cols=69 Identities=23% Similarity=0.314 Sum_probs=52.4
Q ss_pred EEEE---eecCcEEEeeeEEeCC----Cc------e-----EEEEeC-eeeEEEEeEEEECCCCC------------CCC
Q 047411 156 VLKF---DRCNNLRMNNMNFINS----PQ------T-----HVTVMG-CIGVEFGFLSIQAPGTS------------PNT 204 (226)
Q Consensus 156 ~i~~---~~~~nv~i~~i~i~ns----~~------~-----~i~~~~-s~~v~i~~~~i~~~~~~------------~nt 204 (226)
.|.+ .+++||.|+||+|++. |. | .+.+.. +++|.|++|++....+. .-.
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 5778 6899999999999964 22 3 588888 99999999999863210 124
Q ss_pred Ce-EEec-CeecEEEEeeEEec
Q 047411 205 DG-IHIQ-ASSNVYIHNAHISN 224 (226)
Q Consensus 205 DG-i~~~-~s~~v~I~n~~i~~ 224 (226)
|| ||+. .|++|+|.+|+|..
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~ 205 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQ 205 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEE
T ss_pred cceeeeecCCCcEEEEeeEEcC
Confidence 66 5665 68999999999864
No 47
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.68 E-value=0.0037 Score=54.16 Aligned_cols=154 Identities=14% Similarity=0.167 Sum_probs=89.7
Q ss_pred chHHHHHHHHHHhcccCCCCCEEEecCCCeEEEe---------------eeeeeCCCcCccEEEEEee---EEEeeCCCC
Q 047411 41 DDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVH---------------PITFTGPCKSSDITIMLSG---SIIAPNGPN 102 (226)
Q Consensus 41 ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~---------------~l~l~~~~ks~~v~l~~~g---~l~~~~~~~ 102 (226)
.+.++|++|+.+ ..+ +..|+.-.| ++.+. +|.+ .| ++||...| +|.
T Consensus 31 tt~~~L~~al~~-~~~---~p~VI~V~G-tI~~~~~~~~~s~~~~~~~~~l~v----~s-n~TI~G~G~~~~i~------ 94 (355)
T 1pcl_A 31 KNISDFKKALNG-TDS---SAKIIKVTG-PIDISGGKAYTSFDDQKARSQISI----PS-NTTIIGVGSNGKFT------ 94 (355)
T ss_pred CCHHHHHHHHhh-CCC---CcEEEEECC-EEecCCccccccccccccceeEEe----CC-CeEEEEecCCeEEe------
Confidence 355669999932 122 456778889 88764 3444 36 88887652 343
Q ss_pred CcCCCCCcceEEEeCccceEEEeceEEeCCC-cccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCC-----
Q 047411 103 EWKEDDKSKWFDIQSVDSLQIDGSGTIDGRG-KAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSP----- 176 (226)
Q Consensus 103 ~~~~~~~~~~i~~~~~~nv~I~G~G~idG~G-~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~----- 176 (226)
+..|.+.+++||.|++.-+-++.. ..-|... .+-....-.|.+..+++|.|+.++|..+.
T Consensus 95 -------g~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~-------~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~ 160 (355)
T 1pcl_A 95 -------NGSLVIKGVKNVILRNLYIETPVDVAPHYESG-------DGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDK 160 (355)
T ss_pred -------cCEEEEecCCeEEEeeeEEEcCcccccccccc-------cCccccCceEEecCCCcEEEEeeEEeccccCccc
Confidence 234667778899998843222211 1112100 00001234788899999999999999752
Q ss_pred ------------ceEEEEe-CeeeEEEEeEEEECCCCC---CCCCeEE-ec-CeecEEEEeeEEec
Q 047411 177 ------------QTHVTVM-GCIGVEFGFLSIQAPGTS---PNTDGIH-IQ-ASSNVYIHNAHISN 224 (226)
Q Consensus 177 ------------~~~i~~~-~s~~v~i~~~~i~~~~~~---~ntDGi~-~~-~s~~v~I~n~~i~~ 224 (226)
-..+.+. .+++|+|+++.+...... ...|.-. .+ +..+|++++|++..
T Consensus 161 ~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~ 226 (355)
T 1pcl_A 161 YTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDR 226 (355)
T ss_pred cccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeC
Confidence 1223344 689999999999874321 1111100 00 12369999998853
No 48
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.65 E-value=0.00084 Score=58.31 Aligned_cols=62 Identities=18% Similarity=0.207 Sum_probs=39.7
Q ss_pred EEEe-ecCcEEEeeeEEeCC-C-----ceEEEEeCeeeEEEEeEEEECCCCCCCCCeEE---ecCeecEEEEeeEEe
Q 047411 157 LKFD-RCNNLRMNNMNFINS-P-----QTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIH---IQASSNVYIHNAHIS 223 (226)
Q Consensus 157 i~~~-~~~nv~i~~i~i~ns-~-----~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~---~~~s~~v~I~n~~i~ 223 (226)
|.+. +++||.|++|+|++. | .-.+.+..+++|.|++|++... .|+.. ...+++|+|.+|+|.
T Consensus 126 l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~-----~d~~~~~g~~~s~~VTISnn~f~ 197 (359)
T 1idk_A 126 LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARI-----GRQHYVLGTSADNRVSLTNNYID 197 (359)
T ss_dssp EEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEE-----SSCSEEECCCTTCEEEEESCEEE
T ss_pred EEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecC-----CCCcEEecccCcceEEEECcEec
Confidence 5565 677777777777762 1 1246677777777777777742 33332 345677777777775
No 49
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=97.64 E-value=0.00036 Score=65.56 Aligned_cols=109 Identities=12% Similarity=0.066 Sum_probs=72.8
Q ss_pred ceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceE--EEEeecCcEEEeeeEEeCCCceEEEEeCeeeE
Q 047411 111 KWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTV--LKFDRCNNLRMNNMNFINSPQTHVTVMGCIGV 188 (226)
Q Consensus 111 ~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~--i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v 188 (226)
.+|.+.+++|++|++-=..+.......-.....| + ...+.. +. ..|+||+|+++++.+..--++.+..|+||
T Consensus 135 ~lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~N---D--Gid~DGi~fd-i~S~NV~I~Nc~I~ntGDDcIAIksSeNI 208 (772)
T 3gqn_A 135 SNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLD---Y--PYLGDGTTAP-NPSENIWIENCEATGFGDDGITTHHSQYI 208 (772)
T ss_dssp CSEEEESCEEEEEEEEEEESCSSCSEEEECSSSS---C--CCCCTTCCCS-SCCEEEEEESCEEESCSSCSEEECSCEEE
T ss_pred cEEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcC---C--cCCCcCcccc-cccceEEEEeeEEEecCcCeEEecCCceE
Confidence 4789999999999984222221100000000000 0 011111 12 13999999999999888889999999999
Q ss_pred EEEeEEEECCCCCCCCCeEEecC-eecEEEEeeEEecC
Q 047411 189 EFGFLSIQAPGTSPNTDGIHIQA-SSNVYIHNAHISNG 225 (226)
Q Consensus 189 ~i~~~~i~~~~~~~ntDGi~~~~-s~~v~I~n~~i~~g 225 (226)
+|+||++..|....+.-||.+.+ ++||+|+||.+..-
T Consensus 209 ~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT 246 (772)
T 3gqn_A 209 NILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGC 246 (772)
T ss_dssp EEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESS
T ss_pred EEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECC
Confidence 99999998864234567999864 69999999999854
No 50
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.62 E-value=0.00016 Score=64.03 Aligned_cols=69 Identities=16% Similarity=0.272 Sum_probs=53.6
Q ss_pred EEEEeecCcEEEeeeEEeCC----Cc----------e-----EEEEeCeeeEEEEeEEEECCCC------------CCCC
Q 047411 156 VLKFDRCNNLRMNNMNFINS----PQ----------T-----HVTVMGCIGVEFGFLSIQAPGT------------SPNT 204 (226)
Q Consensus 156 ~i~~~~~~nv~i~~i~i~ns----~~----------~-----~i~~~~s~~v~i~~~~i~~~~~------------~~nt 204 (226)
.|.+.+++||.|+||+|++. |. | .+.+..+++|.|++|++....+ ..-.
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 58888999999999999875 21 2 4888999999999999996321 0124
Q ss_pred Ce-EEec-CeecEEEEeeEEec
Q 047411 205 DG-IHIQ-ASSNVYIHNAHISN 224 (226)
Q Consensus 205 DG-i~~~-~s~~v~I~n~~i~~ 224 (226)
|| +|+. .|++|+|.+|+|..
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~ 250 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTN 250 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEE
T ss_pred ccceeeecCCCcEEEEeeEEcC
Confidence 76 4665 68999999999974
No 51
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=97.59 E-value=0.00046 Score=63.53 Aligned_cols=110 Identities=14% Similarity=0.068 Sum_probs=72.4
Q ss_pred ceEEEeCccceEEEeceEEeCCCcccccccccccccC-CcccCCceEEEEeecCcEEEeeeEEeCCCceEEEEeCeeeEE
Q 047411 111 KWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKE-GCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVE 189 (226)
Q Consensus 111 ~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~-~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~ 189 (226)
.+|.+.+++|++|++-=..+... +.-.-. +... ++.......+. ..|+||+|+++++.+...-++.+..|+||+
T Consensus 135 ~lI~f~~c~NV~I~gVti~NSp~---~gI~I~-~~~~NDGid~DGi~fd-~~S~NV~I~Nc~I~~tGDDcIaIksseNI~ 209 (609)
T 3gq8_A 135 SNLSIRACHNVYIRDIEAVDCTL---HGIDIT-CGGLDYPYLGDGTTAP-NPSENIWIENCEATGFGDDGITTHHSQYIN 209 (609)
T ss_dssp CSEEEESCEEEEEEEEEEESCSS---CSEEEE-CSSSSCCCCCTTCCCS-SCCEEEEEESCEEESCSSCSEEECSCEEEE
T ss_pred cEEEEEeeceEEEEeeEEEeCCC---CCeEEe-CCCCCccccCCCcccc-ccceeEEEEeeEEEecCCCEEEecCCeeEE
Confidence 47899999999999832222211 110000 0000 00000000111 139999999999998888899999999999
Q ss_pred EEeEEEECCCCCCCCCeEEecC-eecEEEEeeEEecC
Q 047411 190 FGFLSIQAPGTSPNTDGIHIQA-SSNVYIHNAHISNG 225 (226)
Q Consensus 190 i~~~~i~~~~~~~ntDGi~~~~-s~~v~I~n~~i~~g 225 (226)
|+||++..|....+.-||.+.+ ++||+|+||.+..-
T Consensus 210 I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt 246 (609)
T 3gq8_A 210 ILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGC 246 (609)
T ss_dssp EESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESS
T ss_pred EEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECC
Confidence 9999998864234567898864 69999999999753
No 52
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.57 E-value=0.0018 Score=56.22 Aligned_cols=62 Identities=16% Similarity=0.091 Sum_probs=34.9
Q ss_pred EEEe-ecCcEEEeeeEEeCCCc------eEEEEeCeeeEEEEeEEEECCCCCCCCCeEE---ecCeecEEEEeeEEe
Q 047411 157 LKFD-RCNNLRMNNMNFINSPQ------THVTVMGCIGVEFGFLSIQAPGTSPNTDGIH---IQASSNVYIHNAHIS 223 (226)
Q Consensus 157 i~~~-~~~nv~i~~i~i~ns~~------~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~---~~~s~~v~I~n~~i~ 223 (226)
|.+. +++||.|++|+|++... -.+.+..+++|.|++|++... .|+.. ...+++|+|.+|+|.
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~-----~d~~~~~~~~~s~~vTISnn~f~ 197 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARI-----GRQHIVLGTSADNRVTISYSLID 197 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEE-----SSCSEEECSSCCEEEEEESCEEE
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeecc-----CcCceeecccccccEEEECcEec
Confidence 5554 56666666666665321 245566666666666666642 23321 234666666666664
No 53
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.57 E-value=0.00013 Score=63.52 Aligned_cols=70 Identities=16% Similarity=0.213 Sum_probs=50.8
Q ss_pred eEEEEeecCcEEEeeeEEeCCCceEEE--EeCeeeEEEEeEEEECCC-CCCCCCeEE-----e-cCeecEEEEeeEEec
Q 047411 155 TVLKFDRCNNLRMNNMNFINSPQTHVT--VMGCIGVEFGFLSIQAPG-TSPNTDGIH-----I-QASSNVYIHNAHISN 224 (226)
Q Consensus 155 ~~i~~~~~~nv~i~~i~i~ns~~~~i~--~~~s~~v~i~~~~i~~~~-~~~ntDGi~-----~-~~s~~v~I~n~~i~~ 224 (226)
-.|.+..++++.|+.++|.....-.+. ...+++|+|+++.|.... .+...+|.| + ..+++|+++++++..
T Consensus 154 DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~ 232 (359)
T 1idk_A 154 DAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYH 232 (359)
T ss_dssp CSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEES
T ss_pred CceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCccccceEEEEecCCCeEEEceEeec
Confidence 468888999999999999876544443 457899999999998642 122334333 3 346899999999863
No 54
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.55 E-value=0.00016 Score=62.93 Aligned_cols=106 Identities=15% Similarity=0.194 Sum_probs=64.9
Q ss_pred cceEEEece---EEeCCCccccccccc---cc---cc-CCcccCCceEEEEeecCcEEEeeeEEeCCCceEEE--EeCee
Q 047411 119 DSLQIDGSG---TIDGRGKAWWDISCK---IN---KK-EGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVT--VMGCI 186 (226)
Q Consensus 119 ~nv~I~G~G---~idG~G~~~~~~~~~---~~---~~-~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~--~~~s~ 186 (226)
+|.||.|.| +|.|.|-........ ++ +. .+......-.|.+..++++.|+.++|.....-.+. ...++
T Consensus 108 snkTI~G~g~~~~I~G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~ 187 (359)
T 1qcx_A 108 SNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADN 187 (359)
T ss_dssp SSEEEEECTTCCEEESCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCE
T ss_pred CCceEEecCCceEEecceEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceeecccccc
Confidence 588888864 788776433200000 00 00 00001223468888999999999999876443332 34789
Q ss_pred eEEEEeEEEECCCC-CCCCCeEE-----e-cCeecEEEEeeEEec
Q 047411 187 GVEFGFLSIQAPGT-SPNTDGIH-----I-QASSNVYIHNAHISN 224 (226)
Q Consensus 187 ~v~i~~~~i~~~~~-~~ntDGi~-----~-~~s~~v~I~n~~i~~ 224 (226)
+|+|+++.|....+ +...+|.| + ..+++|+++++++..
T Consensus 188 ~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~ 232 (359)
T 1qcx_A 188 RVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYN 232 (359)
T ss_dssp EEEEESCEEECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEES
T ss_pred cEEEECcEecCCccccccCcccccceeEEecCCCCeehcccEecc
Confidence 99999999986421 22233333 3 346899999999863
No 55
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=97.40 E-value=0.0049 Score=55.26 Aligned_cols=118 Identities=15% Similarity=0.118 Sum_probs=72.6
Q ss_pred cEEEEEee---EEEeeCCCCCcCCCCCc-ceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEee
Q 047411 86 DITIMLSG---SIIAPNGPNEWKEDDKS-KWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDR 161 (226)
Q Consensus 86 ~v~l~~~g---~l~~~~~~~~~~~~~~~-~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~ 161 (226)
+++|...| ++...... ..+ .++.+.+++|++|+|-=..+ .|.-....+ -. ....-.+.+ .
T Consensus 110 nItI~G~Gg~~~iDG~G~~------~~rp~~i~~~~~~Nv~I~gIti~n-----~w~ih~s~~--V~--i~NtDGi~i-~ 173 (464)
T 1h80_A 110 NFSFQGLGNGFLVDFKDSR------DKNLAVFKLGDVRNYKISNFTIDD-----NKTIFASIL--VD--VTERNGRLH-W 173 (464)
T ss_dssp EEEEEECTTCEEEECTTCS------CCBEEEEEECSEEEEEEEEEEEEC-----CSCBSCSEE--EC--EEEETTEEE-E
T ss_pred ceEEECcCcceEEeCCCCC------CCCceEEEEEeeccEEEeeeEEec-----cceEeecee--ee--eecCCCcee-e
Confidence 77777666 55431110 112 36788999999999943333 222100000 00 000001344 7
Q ss_pred cCcEEEeeeEEeCCC-ceE-EEEeCeeeEEEEeEEEECCCCCCCCCeEEec------------CeecEEEEeeEEecC
Q 047411 162 CNNLRMNNMNFINSP-QTH-VTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQ------------ASSNVYIHNAHISNG 225 (226)
Q Consensus 162 ~~nv~i~~i~i~ns~-~~~-i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~------------~s~~v~I~n~~i~~g 225 (226)
|+|++|+++++.+.+ ..+ .....|+||+|+|+++.+ ..||.+. ..+||+++||.+++.
T Consensus 174 s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~g------g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv 245 (464)
T 1h80_A 174 SRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEG------GIALRMETDNLLMKNYKQGGIRNIFADNIRCSKG 245 (464)
T ss_dssp EEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEES------SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESS
T ss_pred ccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEEC------CCEEEEEeCCceeccCCCCcEEEEEEEeEEEECC
Confidence 999999999999986 344 667789999999999775 2444331 368999999998764
No 56
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=97.34 E-value=0.0011 Score=57.46 Aligned_cols=65 Identities=11% Similarity=-0.025 Sum_probs=55.9
Q ss_pred eEEEEeecCcEEEeeeEEeCCCceEEEEeC-eeeEEEEeEEEECCCCCCCCCeEEe--------cCeecEEEEeeEEec
Q 047411 155 TVLKFDRCNNLRMNNMNFINSPQTHVTVMG-CIGVEFGFLSIQAPGTSPNTDGIHI--------QASSNVYIHNAHISN 224 (226)
Q Consensus 155 ~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~-s~~v~i~~~~i~~~~~~~ntDGi~~--------~~s~~v~I~n~~i~~ 224 (226)
..|.+..|++.+|++.++.+....++++.. |++++|+++.+.. +.+|+.+ ..+++++|+++.+..
T Consensus 173 dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~-----~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~ 246 (377)
T 2pyg_A 173 DGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYG-----NGSSGLVVQRGLEDLALPSNILIDGGAYYD 246 (377)
T ss_dssp CSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEES-----CSSCSEEEECCSSCCCCCEEEEEESCEEES
T ss_pred CceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEEC-----ccCceEEEeccccCCCCCccEEEECCEEEc
Confidence 457888999999999988877788999888 9999999999996 5678777 789999999998763
No 57
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=97.34 E-value=0.01 Score=51.02 Aligned_cols=101 Identities=15% Similarity=0.235 Sum_probs=74.3
Q ss_pred cEEEEEeeEEEeeCCCCCcCCCCCcceEEEeCccceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcE
Q 047411 86 DITIMLSGSIIAPNGPNEWKEDDKSKWFDIQSVDSLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNL 165 (226)
Q Consensus 86 ~v~l~~~g~l~~~~~~~~~~~~~~~~~i~~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv 165 (226)
+..|.++|++.+.. +.-|.+ .+|.||-|.| .. . .....|.+.+++||
T Consensus 47 PriIvv~G~I~~~~----------~~~l~v--~snkTI~G~g------a~--~-------------I~G~Gi~I~~a~NV 93 (340)
T 3zsc_A 47 KYVIVVDGTIVFEP----------KREIKV--LSDKTIVGIN------DA--K-------------IVGGGLVIKDAQNV 93 (340)
T ss_dssp CEEEEEEEEEEEEE----------EEEEEE--CSSEEEEEEE------EE--E-------------EEEEEEEEESCEEE
T ss_pred CEEEEECcEEEeCC----------cceEEe--cCCCEEEecc------Cc--E-------------EecCceEEEcCceE
Confidence 67777888876532 122444 3688877743 11 0 01125788899999
Q ss_pred EEeeeEEeCCC-----------ceEEEEeCeeeEEEEeEEEECCCCCCCCCe-EEec-CeecEEEEeeEEec
Q 047411 166 RMNNMNFINSP-----------QTHVTVMGCIGVEFGFLSIQAPGTSPNTDG-IHIQ-ASSNVYIHNAHISN 224 (226)
Q Consensus 166 ~i~~i~i~ns~-----------~~~i~~~~s~~v~i~~~~i~~~~~~~ntDG-i~~~-~s~~v~I~n~~i~~ 224 (226)
.|++++|++.- .-.+.+..++||.|++|.+.. -.|| +++. .|++|+|.+|+|..
T Consensus 94 IIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~-----~~Dg~idi~~~s~~vTISnn~f~~ 160 (340)
T 3zsc_A 94 IIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVN-----GNDGAVDIKKYSNYITVSWNKFVD 160 (340)
T ss_dssp EEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEES-----CSSCSEEEETTCEEEEEESCEEES
T ss_pred EEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeecc-----CCccceEEecCCceEEEECcEecc
Confidence 99999999862 335899999999999999997 3688 7875 58999999999975
No 58
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=97.26 E-value=0.001 Score=57.64 Aligned_cols=69 Identities=16% Similarity=0.156 Sum_probs=54.4
Q ss_pred EEEEeecCcEEEeeeEEeCCCc-----eEEEEeCeeeEEEEeEEEECCCCC--------CCCCe-EEe-cCeecEEEEee
Q 047411 156 VLKFDRCNNLRMNNMNFINSPQ-----THVTVMGCIGVEFGFLSIQAPGTS--------PNTDG-IHI-QASSNVYIHNA 220 (226)
Q Consensus 156 ~i~~~~~~nv~i~~i~i~ns~~-----~~i~~~~s~~v~i~~~~i~~~~~~--------~ntDG-i~~-~~s~~v~I~n~ 220 (226)
.|.+.+++||.|++++|+..+. -.+.+..+++|.|++|.+....+. +..|| +|+ ..+++|+|.+|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 5788899999999999997653 358899999999999999864211 11366 466 47899999999
Q ss_pred EEec
Q 047411 221 HISN 224 (226)
Q Consensus 221 ~i~~ 224 (226)
+|..
T Consensus 184 ~f~~ 187 (353)
T 1air_A 184 YIHG 187 (353)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 9974
No 59
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.16 E-value=0.00079 Score=59.26 Aligned_cols=68 Identities=12% Similarity=0.260 Sum_probs=52.3
Q ss_pred EEEEeecCcEEEeeeEEeCC----C----------ce-----EEEEeCeeeEEEEeEEEECCCC------------CCCC
Q 047411 156 VLKFDRCNNLRMNNMNFINS----P----------QT-----HVTVMGCIGVEFGFLSIQAPGT------------SPNT 204 (226)
Q Consensus 156 ~i~~~~~~nv~i~~i~i~ns----~----------~~-----~i~~~~s~~v~i~~~~i~~~~~------------~~nt 204 (226)
.|.+.. +||.|++|+|++. | .| .+.+..++||.|++|++....+ ..-.
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 588887 9999999999875 2 12 4888999999999999996321 0124
Q ss_pred Ce-EEec-CeecEEEEeeEEec
Q 047411 205 DG-IHIQ-ASSNVYIHNAHISN 224 (226)
Q Consensus 205 DG-i~~~-~s~~v~I~n~~i~~ 224 (226)
|| +|+. .+++|+|.+|+|..
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~ 244 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHD 244 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEE
T ss_pred ccceeeeccCCcEEEEeeEEcC
Confidence 76 4665 68999999999974
No 60
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=96.98 E-value=0.002 Score=55.66 Aligned_cols=104 Identities=13% Similarity=0.148 Sum_probs=70.1
Q ss_pred EeCccceEEEeceEEeCCCcccccccccc-cccCCcccCC--ceEEEEeecCcEEEeeeEEeCCC---------------
Q 047411 115 IQSVDSLQIDGSGTIDGRGKAWWDISCKI-NKKEGCVKLA--PTVLKFDRCNNLRMNNMNFINSP--------------- 176 (226)
Q Consensus 115 ~~~~~nv~I~G~G~idG~G~~~~~~~~~~-~~~~~~~~~r--p~~i~~~~~~nv~i~~i~i~ns~--------------- 176 (226)
..+..-|.+.+.|+|++.+...-...... -...+. ... ...|.+.+++||.|++++|++.-
T Consensus 64 ~~~P~~Ivf~~~g~I~l~~~l~V~sn~TI~G~ga~~-~i~G~G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~ 142 (346)
T 1pxz_A 64 REKALWIIFSQNMNIKLKMPLYVAGHKTIDGRGADV-HLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGV 142 (346)
T ss_dssp CSSCEEEEESSCEEECCSSCEECCSSEEEECTTSCE-EEETTSCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEE
T ss_pred cCCCeEEEEcCCcEEecCccEEecCCeEEEccCCce-EEeCCcceEEEEccCCEEEEeeEEEeeccCCCceEEeccCccc
Confidence 34444566667789998764322210000 000000 001 14678889999999999999751
Q ss_pred -------ceEEEEeCeeeEEEEeEEEECCCCCCCCCeE-Ee-cCeecEEEEeeEEec
Q 047411 177 -------QTHVTVMGCIGVEFGFLSIQAPGTSPNTDGI-HI-QASSNVYIHNAHISN 224 (226)
Q Consensus 177 -------~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi-~~-~~s~~v~I~n~~i~~ 224 (226)
.-++.+..+++|.|++|++.. ..||+ ++ ..|++|+|++|+|..
T Consensus 143 g~~~~~~~DaI~i~~s~nVwIDHcs~s~-----~~Dg~id~~~~s~~vTISnn~f~~ 194 (346)
T 1pxz_A 143 EPVHAQDGDAITMRNVTNAWIDHNSLSD-----CSDGLIDVTLGSTGITISNNHFFN 194 (346)
T ss_dssp EEECCCCCCSEEEESCEEEEEESCEEEC-----CSSEEEEEESSCEEEEEESCEEES
T ss_pred ccccCCCCCEEEEecCceEEEEeeEEec-----CCCCcEeeccCcceEEEEeeEEec
Confidence 125888899999999999996 47897 77 689999999999974
No 61
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=96.76 E-value=0.0052 Score=52.72 Aligned_cols=65 Identities=11% Similarity=0.252 Sum_probs=48.7
Q ss_pred EEEeecCcEEEeeeEEeCCC--ceEEEEe-CeeeEEEEeEEEECCCCCCCCCeEEec-----CeecEEEEeeEEec
Q 047411 157 LKFDRCNNLRMNNMNFINSP--QTHVTVM-GCIGVEFGFLSIQAPGTSPNTDGIHIQ-----ASSNVYIHNAHISN 224 (226)
Q Consensus 157 i~~~~~~nv~i~~i~i~ns~--~~~i~~~-~s~~v~i~~~~i~~~~~~~ntDGi~~~-----~s~~v~I~n~~i~~ 224 (226)
+.+.-.+|.+|.+- +++ ..++.+. .++||.|+|++|+........|+|.+. .++||+|++|.+.-
T Consensus 66 ~~l~v~sn~TI~G~---~a~i~g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~ 138 (330)
T 2qy1_A 66 VQIKNKSDVTIKGA---NGSAANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFA 138 (330)
T ss_dssp EEEESCCSEEEEEC---TTCBBSSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEEC
T ss_pred eEEEcCCCeEEECC---CcEEeeeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEc
Confidence 34444667777552 222 4678888 899999999999975322368999999 59999999999963
No 62
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=96.69 E-value=0.0036 Score=54.19 Aligned_cols=68 Identities=13% Similarity=0.123 Sum_probs=52.1
Q ss_pred EEEEee-cCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEECCC-CCCCCCeEEecCeecEEEEeeEEec
Q 047411 156 VLKFDR-CNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQAPG-TSPNTDGIHIQASSNVYIHNAHISN 224 (226)
Q Consensus 156 ~i~~~~-~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~~~-~~~ntDGi~~~~s~~v~I~n~~i~~ 224 (226)
.+.+.. ..|++|.+.+-. .+..++.+..++||.|+|++|+... .....|+|.+..++||+|++|.+..
T Consensus 81 ~~~i~~~~sn~TI~G~~~~-~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~ 150 (353)
T 1air_A 81 GVEIKEFTKGITIIGANGS-SANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFA 150 (353)
T ss_dssp EEEEESBCSCEEEEECTTC-CBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEEC
T ss_pred ceEEEecCCCEEEEeccCC-CCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEec
Confidence 455554 468888885311 1256888889999999999999743 2346899999999999999999974
No 63
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=96.68 E-value=0.0059 Score=53.95 Aligned_cols=61 Identities=18% Similarity=0.282 Sum_probs=47.5
Q ss_pred cCcEEEeee----EEeCCCceEEEEeCeeeEEEEeEEEECCCC---------------CCCCCeEEecCeecEEEEeeEE
Q 047411 162 CNNLRMNNM----NFINSPQTHVTVMGCIGVEFGFLSIQAPGT---------------SPNTDGIHIQASSNVYIHNAHI 222 (226)
Q Consensus 162 ~~nv~i~~i----~i~ns~~~~i~~~~s~~v~i~~~~i~~~~~---------------~~ntDGi~~~~s~~v~I~n~~i 222 (226)
.+|.+|.+. +|.+ .++.+..++||.|+|++|+...+ .+..|+|.+.+++||+|++|.|
T Consensus 131 ~snkTI~G~G~~~~i~g---~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~ 207 (416)
T 1vbl_A 131 GSNTSIIGVGKDAKIKG---GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTF 207 (416)
T ss_dssp CSSEEEEECTTCCEEES---CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEE
T ss_pred CCCeeEEecCCCeEEec---CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEE
Confidence 456666553 4543 47778899999999999987532 1357999999999999999999
Q ss_pred ecC
Q 047411 223 SNG 225 (226)
Q Consensus 223 ~~g 225 (226)
..+
T Consensus 208 s~~ 210 (416)
T 1vbl_A 208 TDG 210 (416)
T ss_dssp ECT
T ss_pred ecC
Confidence 854
No 64
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=96.18 E-value=0.015 Score=51.14 Aligned_cols=60 Identities=13% Similarity=0.239 Sum_probs=46.2
Q ss_pred cCcEEEeee----EEeCCCceEEEEeCeeeEEEEeEEEECCCC---------------CCCCCeEEecCeecEEEEeeEE
Q 047411 162 CNNLRMNNM----NFINSPQTHVTVMGCIGVEFGFLSIQAPGT---------------SPNTDGIHIQASSNVYIHNAHI 222 (226)
Q Consensus 162 ~~nv~i~~i----~i~ns~~~~i~~~~s~~v~i~~~~i~~~~~---------------~~ntDGi~~~~s~~v~I~n~~i 222 (226)
.+|.+|.+. +|.+ .++.+.. +||.|+|++|+...+ ....|+|.+..++||+|++|.+
T Consensus 126 ~snkTI~G~G~~~~i~g---~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~ 201 (399)
T 2o04_A 126 PANTTIVGSGTNAKVVG---GNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTF 201 (399)
T ss_dssp CSSEEEEESSSCCEEES---CEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEE
T ss_pred CCCceEEeccCCeEEee---CEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeee
Confidence 456666553 4553 4677877 999999999987532 1357999999999999999999
Q ss_pred ecC
Q 047411 223 SNG 225 (226)
Q Consensus 223 ~~g 225 (226)
..+
T Consensus 202 s~~ 204 (399)
T 2o04_A 202 NDG 204 (399)
T ss_dssp ECT
T ss_pred ecC
Confidence 854
No 65
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=96.15 E-value=0.022 Score=49.31 Aligned_cols=60 Identities=27% Similarity=0.400 Sum_probs=45.6
Q ss_pred CcEEEeee----EEeCCCceEEEE---eCeeeEEEEeEEEECCCC-C----------CCCCeEEecC-eecEEEEeeEEe
Q 047411 163 NNLRMNNM----NFINSPQTHVTV---MGCIGVEFGFLSIQAPGT-S----------PNTDGIHIQA-SSNVYIHNAHIS 223 (226)
Q Consensus 163 ~nv~i~~i----~i~ns~~~~i~~---~~s~~v~i~~~~i~~~~~-~----------~ntDGi~~~~-s~~v~I~n~~i~ 223 (226)
+|.+|.+. +|.+ .++.+ ..++||.|+|++|+...+ . ...|+|.+.. ++||+|++|.+.
T Consensus 87 snkTI~G~G~~~~i~g---~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s 163 (361)
T 1pe9_A 87 ANTTVIGLGTDAKFIN---GSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTIS 163 (361)
T ss_dssp SSEEEEECTTCCEEES---SEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEE
T ss_pred CCcEEEccCCCeEEec---CEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEee
Confidence 55555543 4443 47778 689999999999997532 1 3479999999 999999999998
Q ss_pred cC
Q 047411 224 NG 225 (226)
Q Consensus 224 ~g 225 (226)
.+
T Consensus 164 ~~ 165 (361)
T 1pe9_A 164 DG 165 (361)
T ss_dssp CT
T ss_pred cc
Confidence 53
No 66
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=95.81 E-value=0.12 Score=45.57 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=29.9
Q ss_pred ecCcEEEeeeEEeCCCce----------EEEEeCeeeEEEEeEEEECCCC
Q 047411 161 RCNNLRMNNMNFINSPQT----------HVTVMGCIGVEFGFLSIQAPGT 200 (226)
Q Consensus 161 ~~~nv~i~~i~i~ns~~~----------~i~~~~s~~v~i~~~~i~~~~~ 200 (226)
..+++.++||+|+|+..- .+ ...+++..+.+|++.+..+
T Consensus 199 ~g~~F~a~niTf~Ntag~~~~~~~~QAVAL-~v~gDr~~fy~C~f~G~QD 247 (422)
T 3grh_A 199 QNNGLQLQNLTIENTLGDSVDAGNHPAVAL-RTDGDQVQINNVNILGRQN 247 (422)
T ss_dssp CCTTCEEEEEEEEETTGGGSCSSCCCCCSE-EECCSSEEEEEEEEECSTT
T ss_pred ECCCEEEEeeEEEeCCCCCCCCCCCceEEE-EecCCcEEEEeeEEEeecc
Confidence 478999999999988431 23 3467899999999998654
No 67
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=95.70 E-value=0.018 Score=49.23 Aligned_cols=44 Identities=16% Similarity=0.217 Sum_probs=38.0
Q ss_pred EEEEeCeeeEEEEeEEEECCCCCCCCCeEEecC-eecEEEEeeEEe
Q 047411 179 HVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQA-SSNVYIHNAHIS 223 (226)
Q Consensus 179 ~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~-s~~v~I~n~~i~ 223 (226)
++.+..++||.|+|++|+... ....|+|.+.. ++||+|++|.+.
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s 140 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFY 140 (326)
T ss_dssp CEEEESEEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEE
T ss_pred EEEEEecceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEe
Confidence 566678999999999999853 35689999997 999999999996
No 68
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=95.67 E-value=0.025 Score=49.52 Aligned_cols=106 Identities=13% Similarity=0.099 Sum_probs=74.1
Q ss_pred ceEEEeCccceEEEeceEE-eCCCcccccccc--c--ccccCCcccCCceEEEEeecCcEEEeeeEEeCCCceEEEEeCe
Q 047411 111 KWFDIQSVDSLQIDGSGTI-DGRGKAWWDISC--K--INKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVMGC 185 (226)
Q Consensus 111 ~~i~~~~~~nv~I~G~G~i-dG~G~~~~~~~~--~--~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s 185 (226)
..+.++++++.+|.+.-+. -|+|-..|.... + .+.-.. ..+...++++++.+..|++-++..-..++++++.|
T Consensus 185 fGI~l~~a~~~~I~~N~I~e~GNgI~L~G~~~~~~I~~N~i~~--~~dG~gIyl~ns~~~~I~~N~i~~~~R~gIh~m~s 262 (410)
T 2inu_A 185 HALIVRGADALRVNDNMIAECGNCVELTGAGQATIVSGNHMGA--GPDGVTLLAENHEGLLVTGNNLFPRGRSLIEFTGC 262 (410)
T ss_dssp EEEEETTEESCEEESCEEESSSEEEEECSCEESCEEESCEEEC--CTTSEEEEEESEESCEEESCEECSCSSEEEEEESC
T ss_pred EEEEEccCCCcEEECCEEEecCCceeeccccccceEecceeee--cCCCCEEEEEeCCCCEEECCCcccCcceEEEEEcc
Confidence 3566777778887775333 144444444110 0 000011 34556799999999999999886666889999999
Q ss_pred eeEEEEeEEEECCCCCCCCCeEEecC--eecEEEEeeEEe
Q 047411 186 IGVEFGFLSIQAPGTSPNTDGIHIQA--SSNVYIHNAHIS 223 (226)
Q Consensus 186 ~~v~i~~~~i~~~~~~~ntDGi~~~~--s~~v~I~n~~i~ 223 (226)
.+..|++.++.. +.-|++.+. |++.+|+++.+.
T Consensus 263 ~~~~i~~N~f~~-----~~~Gi~~M~s~~~~n~v~~N~f~ 297 (410)
T 2inu_A 263 NRCSVTSNRLQG-----FYPGMLRLLNGCKENLITANHIR 297 (410)
T ss_dssp BSCEEESCEEEE-----SSSCSEEEESSCBSCEEESCEEE
T ss_pred CCCEEECCEEec-----ceeEEEEEEcCCCCCEEECCEEe
Confidence 999999999996 678899987 448999888876
No 69
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=95.53 E-value=0.019 Score=50.43 Aligned_cols=62 Identities=11% Similarity=0.102 Sum_probs=51.0
Q ss_pred EEEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecC-eecEEEEeeEEe
Q 047411 156 VLKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQA-SSNVYIHNAHIS 223 (226)
Q Consensus 156 ~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~-s~~v~I~n~~i~ 223 (226)
.|.+ ....++|++++|+|+..-++.+.. .+.+|++++++.. ...||.+.. +++.+|++|++.
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~ 171 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAY 171 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEE
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEE
Confidence 4666 689999999999999877888876 6889999999973 234999986 448999999985
No 70
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=88.87 E-value=0.14 Score=45.16 Aligned_cols=38 Identities=34% Similarity=0.422 Sum_probs=26.6
Q ss_pred cCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCCCeEEEe
Q 047411 32 FGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKGKTFLVH 74 (226)
Q Consensus 32 yGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G~tY~~~ 74 (226)
=||+|||++|||+|+.+|+. +... +.++=-.|.||.+.
T Consensus 4 ~~a~gdgvtddt~a~~~~l~-~~~~----~~~IDG~G~T~kVs 41 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALN-DTPV----GQKINGNGKTYKVT 41 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHH-HSCT----TSCEECTTCEEECS
T ss_pred CcccCCCccCcHHHHHHHhc-cCCC----CeEEeCCCceEEee
Confidence 48999999999999999994 4332 23444445566554
No 71
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=79.56 E-value=4.4 Score=36.48 Aligned_cols=66 Identities=6% Similarity=-0.101 Sum_probs=43.1
Q ss_pred EEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEec
Q 047411 157 LKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISN 224 (226)
Q Consensus 157 i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~ 224 (226)
+....+.+.+|++-++.++.. .+++.++.+.+|++..+........+-||.+.++.+ +|+|++|..
T Consensus 246 im~skS~~n~i~~N~~~~~~g-gi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~~~~-~I~nN~f~~ 311 (506)
T 1dbg_A 246 IITSKSQENVYYGNTYLNCQG-TMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWGSRH-VIACNYFEL 311 (506)
T ss_dssp EEEEESBSCEEESCEEESCSS-EEEEEECSSCEEESCEEEECSSSSCBCCEEECSBSC-EEESCEEEE
T ss_pred EEEEecCCEEEECCEEEcccC-cEEEeecCccEEECCEEECCcCccCceEEEEECCCC-EEECCEEEC
Confidence 444455567888888888744 788888887788888887632101145677766544 777776653
No 72
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=78.33 E-value=29 Score=29.10 Aligned_cols=62 Identities=16% Similarity=0.217 Sum_probs=49.4
Q ss_pred eEEEEeecCcEEEeeeEEeCCC------ceEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEec
Q 047411 155 TVLKFDRCNNLRMNNMNFINSP------QTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISN 224 (226)
Q Consensus 155 ~~i~~~~~~nv~i~~i~i~ns~------~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~ 224 (226)
..|.+. +++++++||+|+|+. .-.+.+ .++++.+++|++.. +-|++.....++ .+++|+|+.
T Consensus 87 atv~v~-a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r~-~~~~c~I~G 154 (319)
T 1gq8_A 87 ATVAAV-GAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-----YQDSLYVHSNRQ-FFINCFIAG 154 (319)
T ss_dssp CSEEEC-STTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-----STTCEEECSSEE-EEESCEEEE
T ss_pred EEEEEE-CCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-----cceeeeecCccE-EEEecEEEe
Confidence 356664 999999999999974 233544 68999999999997 468888888664 999999973
No 73
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=76.20 E-value=3.7 Score=36.41 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=23.0
Q ss_pred EEEeecCcEEEe-eeEEeCCCceEEEEeCeeeEEEEeEEEECC
Q 047411 157 LKFDRCNNLRMN-NMNFINSPQTHVTVMGCIGVEFGFLSIQAP 198 (226)
Q Consensus 157 i~~~~~~nv~i~-~i~i~ns~~~~i~~~~s~~v~i~~~~i~~~ 198 (226)
+++..|++++++ ++.+. ..|+||.|.+|.|.--
T Consensus 198 IhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsVG 231 (514)
T 2vbk_A 198 SKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSRG 231 (514)
T ss_dssp EEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEECT
T ss_pred EeEeccCceecccCcccc---------CCCCeEEEeccEEecC
Confidence 556667776666 55554 3688888888888764
No 74
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=74.51 E-value=15 Score=28.68 Aligned_cols=60 Identities=12% Similarity=0.223 Sum_probs=42.2
Q ss_pred CceEEEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEee
Q 047411 153 APTVLKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNA 220 (226)
Q Consensus 153 rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~ 220 (226)
.+.+|.++ +..+|+|+.|-.+..-++|... +++++|+..... -.|.+.+.++..++|.+.
T Consensus 40 q~~vF~le--~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GG 99 (197)
T 1ee6_A 40 QKPIFRLE--AGASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGG 99 (197)
T ss_dssp CCCSEEEC--TTEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESC
T ss_pred CCcEEEec--CCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECC
Confidence 34566665 6789999999877778888875 589999988874 346666655555555543
No 75
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=71.15 E-value=15 Score=28.59 Aligned_cols=90 Identities=9% Similarity=0.093 Sum_probs=51.7
Q ss_pred ceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEECCC
Q 047411 120 SLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQAPG 199 (226)
Q Consensus 120 nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~~~ 199 (226)
-++|.-..++||.++.|-. .... ..... ...+.+|.++ +..+|+|+.|-.+..-++|.. -+++++|+.....
T Consensus 14 ~i~V~aG~~fDGg~k~y~~-~~~~-~g~Q~-E~q~~vF~le--~GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwedV- 85 (196)
T 3t9g_A 14 TIIVKSGQTYDGKGIKIIA-QGMG-DGSQS-ENQKPIFKLE--KGANLKNVIIGAPGCDGIHCY--GDNVVENVVWEDV- 85 (196)
T ss_dssp CEEECTTCEEEEEEEEEEE-SSSC-CSSSC-SCCCCSEEEC--TTCEEEEEEECSCCTTCEEEC--SSEEEEEEEESSC-
T ss_pred eEEEcCCceEcCCCeEEeC-CCCC-CCccc-cCCCceEEEc--CCCEEEEEEECCCCcCcEEEc--CCEeEEEEEeeee-
Confidence 3444432477777766643 1100 00111 2234456664 678899998877777778775 3678888888763
Q ss_pred CCCCCCeEEecCeecEEEEee
Q 047411 200 TSPNTDGIHIQASSNVYIHNA 220 (226)
Q Consensus 200 ~~~ntDGi~~~~s~~v~I~n~ 220 (226)
-.|.+.+.++..++|.+.
T Consensus 86 ---cEDA~T~kg~g~~~I~GG 103 (196)
T 3t9g_A 86 ---GEDALTVKSEGVVEVIGG 103 (196)
T ss_dssp ---CSCSEEECSSEEEEEESC
T ss_pred ---eceeeEEcCCCeEEEECC
Confidence 346666655555555443
No 76
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=64.98 E-value=3.7 Score=37.67 Aligned_cols=60 Identities=13% Similarity=0.124 Sum_probs=41.2
Q ss_pred EEEEeecCcEEEeeeEEeCCC--ce------E-----EEEeCeeeEEEEeEEEECCCCCCCCCeEEe---cCeecEEEEe
Q 047411 156 VLKFDRCNNLRMNNMNFINSP--QT------H-----VTVMGCIGVEFGFLSIQAPGTSPNTDGIHI---QASSNVYIHN 219 (226)
Q Consensus 156 ~i~~~~~~nv~i~~i~i~ns~--~~------~-----i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~---~~s~~v~I~n 219 (226)
+|.+.+++|++|.|--..+.. .| . +.+..|+ |+++++.++ ...-.+++ ..|+||+|+|
T Consensus 143 lI~~~~~~NItItG~GtIDGqG~~wW~~~~~~~~RP~l~f~~c~---I~GITi~NS---DP~w~I~iG~~~~c~NVtI~n 216 (600)
T 2x6w_A 143 PASSGNLENCHIYGHGVVDFGGYEFGASSQLRNGVAFGRSYNCS---VTGITFQNG---DVTWAITLGWNGYGSNCYVRK 216 (600)
T ss_dssp GGGCCCEEEEEEESSCEEECTTCCCSSTTCCEEEEECCSEEEEE---EESCEEESC---CCSCSEEECBTTBEEEEEEES
T ss_pred eEEEecceeEEEecceeeeCCccccccccccCCCCCEEEEeeeE---EeCeEEECC---CCccEEEeCCCCCcccEEEeC
Confidence 466778888888874333222 11 1 3455565 999999984 12345888 8999999999
Q ss_pred eE
Q 047411 220 AH 221 (226)
Q Consensus 220 ~~ 221 (226)
+.
T Consensus 217 vt 218 (600)
T 2x6w_A 217 CR 218 (600)
T ss_dssp CE
T ss_pred eE
Confidence 99
No 77
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=62.30 E-value=68 Score=26.76 Aligned_cols=62 Identities=11% Similarity=0.166 Sum_probs=49.3
Q ss_pred eEEEEeecCcEEEeeeEEeCCC------ceEEEEeCeeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEec
Q 047411 155 TVLKFDRCNNLRMNNMNFINSP------QTHVTVMGCIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHISN 224 (226)
Q Consensus 155 ~~i~~~~~~nv~i~~i~i~ns~------~~~i~~~~s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~~ 224 (226)
..+.+ .+++++++||+|+|+. .-.+.+ .++++.+++|++.. +-|++.....++ .+++|+|+.
T Consensus 83 atv~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r~-~~~~c~I~G 150 (317)
T 1xg2_A 83 ATLAA-VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-----YQDTLYAHSQRQ-FYRDSYVTG 150 (317)
T ss_dssp CSEEE-CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-----STTCEEECSSEE-EEESCEEEE
T ss_pred eEEEE-ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-----cccceeecCccE-EEEeeEEEe
Confidence 35666 5999999999999984 233544 68899999999997 458888887665 899999973
No 78
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=54.18 E-value=75 Score=24.66 Aligned_cols=19 Identities=16% Similarity=0.352 Sum_probs=10.1
Q ss_pred EEEEeecCcEEEeeeEEeC
Q 047411 156 VLKFDRCNNLRMNNMNFIN 174 (226)
Q Consensus 156 ~i~~~~~~nv~i~~i~i~n 174 (226)
.|....+-.+.|+|++..+
T Consensus 112 V~Q~Ng~Gtv~I~nF~~~~ 130 (196)
T 3t9g_A 112 VFQLNAPCTFKVKNFTATN 130 (196)
T ss_dssp EEEECSSEEEEEEEEEEEE
T ss_pred EEEECCCceEEEeeEEEcc
Confidence 4445555555555555554
No 79
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=48.59 E-value=1.2e+02 Score=25.56 Aligned_cols=77 Identities=9% Similarity=0.028 Sum_probs=49.4
Q ss_pred ceEEEeceEEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEECCC
Q 047411 120 SLQIDGSGTIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQAPG 199 (226)
Q Consensus 120 nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~~~ 199 (226)
.-+|.| +++||.++.| ..... .+. .....+|.+++ ..+++|+.|-....-++|... .+++|+|+.....
T Consensus 124 ~~~i~g-~t~Dgg~k~~-~~~c~----~q~-E~q~~vF~le~--GatlkNvIiG~~~~dGIHC~~-G~CtleNVwwedV- 192 (344)
T 3b4n_A 124 GATFEN-RTVDCGGVTI-GTSCP----NDS-DKQKPLIILKN--ATVKNLRISASGGADGIHCDS-GNCTIENVIWEDI- 192 (344)
T ss_dssp TEEEES-SEEECTTCEE-CCCCC----TTC-SCCCCSEEEES--CEEEEEEECTTCCTTCEEEEE-SEEEEEEEEESSC-
T ss_pred ceeEec-ceEcCCCcEE-CCCCC----Ccc-ccCccEEEEcc--CcEEEEEEecCCCccceEEcc-CCeeEEEEeehhc-
Confidence 456776 6999999886 32111 111 22345677764 578999999777777888761 2588999888774
Q ss_pred CCCCCCeEEec
Q 047411 200 TSPNTDGIHIQ 210 (226)
Q Consensus 200 ~~~ntDGi~~~ 210 (226)
-.|.+.+.
T Consensus 193 ---cEDA~T~k 200 (344)
T 3b4n_A 193 ---CEDAATNN 200 (344)
T ss_dssp ---SSCSEEEC
T ss_pred ---ccccceec
Confidence 33445444
No 80
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=42.60 E-value=30 Score=26.95 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=27.1
Q ss_pred eeeEEEEeEEEECCCCCCCCCeEEecCeecEEEEeeEEe
Q 047411 185 CIGVEFGFLSIQAPGTSPNTDGIHIQASSNVYIHNAHIS 223 (226)
Q Consensus 185 s~~v~i~~~~i~~~~~~~ntDGi~~~~s~~v~I~n~~i~ 223 (226)
-++.+++|+.|-. +..||||..+ +-+|+|+|.+
T Consensus 47 e~GaTLkNvIIG~----~~~dGIHC~G--~CtleNVwwe 79 (197)
T 1ee6_A 47 EAGASLKNVVIGA----PAADGVHCYG--DCTITNVIWE 79 (197)
T ss_dssp CTTEEEEEEEECS----SCTTCEEEES--CEEEEEEEES
T ss_pred cCCCEEEEEEEcC----CCcccEEEcC--ceeEEEEEee
Confidence 3578999999976 4689999987 5899999876
No 81
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=32.63 E-value=50 Score=26.73 Aligned_cols=37 Identities=14% Similarity=0.290 Sum_probs=24.6
Q ss_pred cceEEeeecCccCCCCcchHHHHHHHHHHhcccCCCCCEEEecCC
Q 047411 24 ADEFNVLDFGAAGDGNADDSMAFIKAWNNTCSATAKSPTMVIPKG 68 (226)
Q Consensus 24 ~~~~~v~dyGA~~dg~~ddt~aiq~Ai~~a~~~~g~g~~v~iP~G 68 (226)
+..+-+..-||-.| +.+.+.|+++|+. + |.+|++|.|
T Consensus 84 G~dvv~~S~gaLad------~~l~~~L~~aA~~-g-g~~l~vpSG 120 (253)
T 1j5p_A 84 PVNYIIISTSAFAD------EVFRERFFSELKN-S-PARVFFPSG 120 (253)
T ss_dssp SSEEEECCGGGGGS------HHHHHHHHHHHHT-C-SCEEECCCT
T ss_pred CCCEEEcChhhhcC------HHHHHHHHHHHHH-C-CCeEEecCC
Confidence 44454555555332 4566777777776 5 789999999
No 82
>1l0s_A Thermal hysteresis protein; LEFT-handed beta-helix, antifreeze protein, iodination; HET: TYI; 2.30A {Choristoneura fumiferana} SCOP: b.81.2.1 PDB: 1eww_A 1n4i_A
Probab=29.00 E-value=76 Score=20.84 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=14.8
Q ss_pred cCcEEEeeeEEeCCCceEEEEeCeeeEEEEeEEEEC
Q 047411 162 CNNLRMNNMNFINSPQTHVTVMGCIGVEFGFLSIQA 197 (226)
Q Consensus 162 ~~nv~i~~i~i~ns~~~~i~~~~s~~v~i~~~~i~~ 197 (226)
|-..++.|+.+.|| .+....|.|-..+++.|..
T Consensus 17 Cv~STlTNCyidnS---qv~~TTCTnSqy~gv~ITs 49 (90)
T 1l0s_A 17 CEKSTLTNCXVDKS---EVFGTTCTGSRFDGVTITT 49 (90)
T ss_dssp EESEEEESCEEEEE---EEESCEEESCEEEEEEEES
T ss_pred hhhccccceeeecc---eEEEeeccCcccccEEEEe
Confidence 44455555555554 2222334444444444443
No 83
>1fjk_A Cardiac phospholamban; helix, membrane protein; NMR {Sus scrofa} SCOP: j.37.1.1 PDB: 1fjp_A 2kyv_A 1zll_A 2hyn_A 1n7l_A 2kb7_P 1plp_A
Probab=26.93 E-value=38 Score=19.72 Aligned_cols=15 Identities=47% Similarity=0.877 Sum_probs=9.3
Q ss_pred hhhHHHHHHHHHhhh
Q 047411 4 DLCAILYFLYLISTA 18 (226)
Q Consensus 4 ~~~~~~~~~~~~~~~ 18 (226)
+.|+|++++++++..
T Consensus 34 nfclilicllli~ii 48 (52)
T 1fjk_A 34 NFCLILIFLLLICII 48 (52)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 456777776666543
No 84
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=25.78 E-value=1.2e+02 Score=25.78 Aligned_cols=12 Identities=25% Similarity=0.603 Sum_probs=6.0
Q ss_pred EEEEeecCcEEE
Q 047411 156 VLKFDRCNNLRM 167 (226)
Q Consensus 156 ~i~~~~~~nv~i 167 (226)
.+.+.+|+|++|
T Consensus 82 sl~I~~c~nC~I 93 (352)
T 3bh7_B 82 TVTIDDCTNCII 93 (352)
T ss_dssp CEEEESCBSCEE
T ss_pred eEEEecCCCCEE
Confidence 455555555443
No 85
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=25.48 E-value=1.5e+02 Score=25.11 Aligned_cols=12 Identities=17% Similarity=0.564 Sum_probs=6.7
Q ss_pred EEEeecCcEEEe
Q 047411 157 LKFDRCNNLRMN 168 (226)
Q Consensus 157 i~~~~~~nv~i~ 168 (226)
+.+.+|+|++|.
T Consensus 102 v~I~~C~n~~i~ 113 (352)
T 3bh7_B 102 VFFRNCRDCKCT 113 (352)
T ss_dssp EEEESCEEEEEE
T ss_pred EEEEcCCCcEEE
Confidence 555666655553
No 86
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=25.06 E-value=1.3e+02 Score=22.00 Aligned_cols=36 Identities=17% Similarity=0.409 Sum_probs=26.2
Q ss_pred EEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEe
Q 047411 128 TIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFI 173 (226)
Q Consensus 128 ~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ 173 (226)
.|||+-..+|... ...|.-|.+.-.+.+.|+.+.+.
T Consensus 40 ~iDgn~~T~W~t~----------g~~Pq~i~Idf~k~~~is~~~i~ 75 (153)
T 1tvg_A 40 IIDGNPETFWTTT----------GMFPQEFIICFHKHVRIERLVIQ 75 (153)
T ss_dssp GGSSCTTCCEECC----------SCSSEEEEEEEEEEEEEEEEEEE
T ss_pred cCcCCCCceEECC----------CCCCcEEEEECCCceEEEEEEEE
Confidence 5899999999732 34577677766777788877776
No 87
>2b0r_A Possible adenyl cyclase-associated protein; structural genomics consortium, SGC, unknown function; 2.60A {Cryptosporidium parvum}
Probab=21.55 E-value=2.7e+02 Score=21.58 Aligned_cols=28 Identities=7% Similarity=0.323 Sum_probs=19.8
Q ss_pred EEEEeecCcEE------EeeeEEeCCCceEEEEe
Q 047411 156 VLKFDRCNNLR------MNNMNFINSPQTHVTVM 183 (226)
Q Consensus 156 ~i~~~~~~nv~------i~~i~i~ns~~~~i~~~ 183 (226)
.+.+.+|+.+. |..+.+.|++.+.+.+.
T Consensus 93 sItld~C~k~~vv~dsvVSsvEvinc~~v~vQV~ 126 (202)
T 2b0r_A 93 SIFIENCVGCIFLVNGVISSIEIVNCDDIKLQMT 126 (202)
T ss_dssp EEEEEEEEEEEEEECCBSSEEEEESCEEEEEEES
T ss_pred EEEEecCCcEEEEEeccEEEEEEEecCcEEEEEe
Confidence 57777787766 66788888877765543
No 88
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=20.71 E-value=98 Score=22.12 Aligned_cols=36 Identities=14% Similarity=0.454 Sum_probs=25.6
Q ss_pred EEeCCCcccccccccccccCCcccCCceEEEEeecCcEEEeeeEEe
Q 047411 128 TIDGRGKAWWDISCKINKKEGCVKLAPTVLKFDRCNNLRMNNMNFI 173 (226)
Q Consensus 128 ~idG~G~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~ 173 (226)
.|||+...+|... ...|.-|.+.-.+.+.|+.+++.
T Consensus 32 ~iDg~~~T~W~s~----------g~~pq~i~I~~~~~~~is~~~i~ 67 (139)
T 2yc2_A 32 MLDGKDNTFWVTT----------GMFPQEFVLRLESCIRVSKITTL 67 (139)
T ss_dssp GGSSCTTCCEECC----------SSSCEEEEEEEEEEEEEEEEEEE
T ss_pred eECCCCCCEEeCC----------CCCCeEEEEECCCceEEEEEEEE
Confidence 5899999999732 34566666666777777777776
Done!