BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047419
         (470 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase
           (Ntmat1) Complexed With Malonyl-Coa
          Length = 453

 Score =  180 bits (456), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/486 (31%), Positives = 223/486 (45%), Gaps = 62/486 (12%)

Query: 3   AKVVEQEVTKVTPLRSHSSSAQELTLPLTYFDILWLKFPPVERIFFYEITGLASDFFNSE 62
           A V+EQ   +V P      SA ELTLPLTYFD +WL F    RI FY++     DF  + 
Sbjct: 2   ASVIEQ--CQVVP---SPGSATELTLPLTYFDHVWLAFHRXRRILFYKLPISRPDFVQT- 55

Query: 63  IVPRXXXXXXXXXXXXXXXAGSIVWRPXXXXXXXXPVIYYSPDDDDYGVSVTVAVS-CNN 121
           I+P                AG++            P + Y       G SV+V  S  + 
Sbjct: 56  IIPTLKDSLSLTLKYYLPLAGNVA---CPQDWSGYPELRYVT-----GNSVSVIFSESDX 107

Query: 122 DFSHLSGNGIRGDVEFHPLVPHCC-----------------LTLFPDRGFSIGVSSHHAI 164
           DF++L G   R   +F+  VP                    +TLFP+ G SIG ++HH  
Sbjct: 108 DFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVA 167

Query: 165 LDGKSTTMFVKSWAYLCKQLAELEQEPSNVNVLPELLTPVFDRTLIKDPKGLYMRYFNMW 224
            DG +   FV++WA L K   + EQ       L     P +DR++IKDP G+    +N  
Sbjct: 168 GDGATIVKFVRAWALLNKFGGD-EQ------FLANEFIPFYDRSVIKDPNGVGXSIWNEX 220

Query: 225 FSSDPNSKPSLKVLPPVSVDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQLHLSTYV 284
                  K S  V PP        VR +F++TR DI KL+   N +   + K  H++++ 
Sbjct: 221 KKYKHXXKXSDVVTPP------DKVRGTFIITRHDIGKLK---NLVLTRRPKLTHVTSFT 271

Query: 285 LTLAYAYVCIVNAKRXXXXXXXXNRDVIFGFPVDYRSRLNPSAPLNYFGNC-VGRVAEFA 343
           +T AY + CI+ ++         N    FG   D R++ NP  P +YFGN  VG VA   
Sbjct: 272 VTCAYVWTCIIKSEAATGEEIDENGXEFFGCAADCRAQFNPPLPPSYFGNALVGYVARTR 331

Query: 344 KASDFMQLEKGFAFAVEKLSDLVKGIDADA---FEGSK-EQIAQIMAKLKQGALLLSVAG 399
           +    +  ++GF  AVE + + ++    D      GS  ++  ++ AK       LSVAG
Sbjct: 332 QVD--LAGKEGFTIAVELIGEAIRKRXKDEEWILSGSWFKEYDKVDAKRS-----LSVAG 384

Query: 400 STHFDVYGSDFGWGRPKKVEIMSIDVSGAVSLAESRDXXXX--XXXXXXLEKPQMEAFAS 457
           S   D+Y +DFGWGRP+K+E +SID    +S + S+             L K +  AFA+
Sbjct: 385 SPKLDLYAADFGWGRPEKLEFVSIDNDDGISXSLSKSKDSDGDLEIGLSLSKTRXNAFAA 444

Query: 458 LFRDGL 463
            F  G+
Sbjct: 445 XFTHGI 450


>pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat
           Complexed With Malonyl-coa
 pdb|2E1T|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat
           Complexed With Malonyl-coa
 pdb|2E1U|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat
 pdb|2E1U|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat
          Length = 454

 Score =  179 bits (453), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 217/475 (45%), Gaps = 84/475 (17%)

Query: 27  TLPLTYFDILWLKFPPVERIFFYEITGLASDFFNSEIVPRXXXXXXXXXXXXXXXAGSIV 86
           +L LT+FD  WL+ PP+  +FFYE+    S F    +VP                 G +V
Sbjct: 26  SLQLTFFDFFWLRSPPINNLFFYELPITRSQF-TETVVPNIKHSLSITLKHFYPFVGKLV 84

Query: 87  WRPXXXXXXXXPVIYYSPDDDDYGVSVTVAVSCNNDFSHLSGNGIRGDVEFHPLVP---- 142
             P        P I Y   D    V+VT A  CN D + L+GN  R   +F+ LVP    
Sbjct: 85  VYPAPTKK---PEICYVEGD---SVAVTFA-ECNLDLNELTGNHPRNCDKFYDLVPILGE 137

Query: 143 -----HCC--------LTLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQ 189
                 C         +TLFP++G +IG+++HH + D  +   F+K+W  + +     E 
Sbjct: 138 STRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDE- 196

Query: 190 EPSNVNVLPELLTPVFDRTLIKDP-------KGLYMRYFNMWFSSDPNSKPSLKVLPPVS 242
                + L     P++DR +IK P       K   +  FN  + +   + PS K+     
Sbjct: 197 -----SFLANGTRPLYDR-IIKYPMLDEAYLKRAKVESFNEDYVTQSLAGPSDKL----- 245

Query: 243 VDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQL----HLSTYVLTLAYAYVCIVNAK 298
                  RA+F+LTR  I +L+D +         QL    ++S++ +  AY + CI  ++
Sbjct: 246 -------RATFILTRAVINQLKDRV-------LAQLPTLEYVSSFTVACAYIWSCIAKSR 291

Query: 299 RXXXXXXXXNRDVIFGFPVDYRSRLNPSAPLNYFGNCVGRVAEFAKASDFMQLEKGFAFA 358
                    ++  +FGFP+D R+R+ P  P  YFGNCVG  A  AK ++ +  ++GF  A
Sbjct: 292 N--------DKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAK-TNLLIGKEGFITA 342

Query: 359 VE--------KLSDLVKGIDADAFEGSKEQIAQIMAKLKQGALLLSVAGSTHFDVYGSDF 410
            +         L+D   G+  D  E   + +++ M        +  V+G+     Y  DF
Sbjct: 343 AKLIGENLHKTLTDYKDGVLKDDMESFNDLVSEGMP-----TTMTWVSGTPKLRFYDMDF 397

Query: 411 GWGRPKKVEIMSIDVSGAVSLAESRDXXXXXXXXXXLEKPQMEAFASLFRDGLDA 465
           GWG+PKK+E +SID +GA+S+   ++          +   QME F  +F DGL A
Sbjct: 398 GWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVHIFDDGLKA 452


>pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno-
           Methionine Derivative
 pdb|2E1V|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno-
           Methionine Derivative
          Length = 454

 Score =  171 bits (433), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 213/475 (44%), Gaps = 84/475 (17%)

Query: 27  TLPLTYFDILWLKFPPVERIFFYEITGLASDFFNSEIVPRXXXXXXXXXXXXXXXAGSIV 86
           +L LT+FD  WL+ PP+  +FFYE+    S F    +VP                 G +V
Sbjct: 26  SLQLTFFDFFWLRSPPINNLFFYELPITRSQF-TETVVPNIKHSLSITLKHFYPFVGKLV 84

Query: 87  WRPXXXXXXXXPVIYYSPDDDDYGVSVTVAVSCNNDFSHLSGNGIRGDVEFHPLVP---- 142
             P        P I Y   D    V+VT A  CN D + L+GN  R   +F+ LVP    
Sbjct: 85  VYPAPTKK---PEICYVEGD---SVAVTFA-ECNLDLNELTGNHPRNCDKFYDLVPILGE 137

Query: 143 -----HCC--------LTLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQ 189
                 C         +TLFP++G +IG+++HH + D  +   F+K+W  + +     E 
Sbjct: 138 STRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDE- 196

Query: 190 EPSNVNVLPELLTPVFDRTLIKDP-------KGLYMRYFNMWFSSDPNSKPSLKVLPPVS 242
                + L     P++DR +IK P       K   +  FN  + +   + PS K+     
Sbjct: 197 -----SFLANGTRPLYDR-IIKYPXLDEAYLKRAKVESFNEDYVTQSLAGPSDKL----- 245

Query: 243 VDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQL----HLSTYVLTLAYAYVCIVNAK 298
                  RA+F+LTR  I +L+D +         QL    ++S++ +  AY + CI  ++
Sbjct: 246 -------RATFILTRAVINQLKDRV-------LAQLPTLEYVSSFTVACAYIWSCIAKSR 291

Query: 299 RXXXXXXXXNRDVIFGFPVDYRSRLNPSAPLNYFGNCVGRVAEFAKASDFMQLEKGFAFA 358
                    ++  +FGFP+D R+R  P  P  YFGNCVG  A  AK ++ +  ++GF  A
Sbjct: 292 N--------DKLQLFGFPIDRRARXKPPIPTAYFGNCVGGCAAIAK-TNLLIGKEGFITA 342

Query: 359 VE--------KLSDLVKGIDADAFEGSKEQIAQIMAKLKQGALLLSVAGSTHFDVYGSDF 410
            +         L+D   G+  D  E   + +++             V+G+     Y  DF
Sbjct: 343 AKLIGENLHKTLTDYKDGVLKDDXESFNDLVSEGXPTTXTW-----VSGTPKLRFYDXDF 397

Query: 411 GWGRPKKVEIMSIDVSGAVSLAESRDXXXXXXXXXXLEKPQMEAFASLFRDGLDA 465
           GWG+PKK+E +SID +GA+S+   ++          +   Q E F  +F DGL A
Sbjct: 398 GWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQXEDFVHIFDDGLKA 452


>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora
 pdb|4G0B|B Chain B, Structure Of Native Hct From Coffea Canephora
          Length = 436

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 127/328 (38%), Gaps = 43/328 (13%)

Query: 146 LTLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQEPSNVNVLPELLTPVF 205
           +T F   G S+GV   H   DG S   F+ SW+ + + L        +V      L P  
Sbjct: 139 VTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGL--------DVT-----LPPFI 185

Query: 206 DRTLI--KDPKGLYMRYFNMWFSSDPNSKPSLKVLPPV--SVDFNKLVRASFVLTREDIK 261
           DRTL+  +DP     ++            P+LKV P    S    +   + F LTRE I 
Sbjct: 186 DRTLLRARDPPQPQFQHIEY------QPPPALKVSPQTAKSDSVPETAVSIFKLTREQIS 239

Query: 262 KLRDSINDLNDSKQKQLHLSTYVLTLAYAYVCIVNAKRXXXXXXXXNRDVIFGFPVDYRS 321
            L+    +  ++    +  S+Y +   + + C   A+         ++        D R+
Sbjct: 240 ALKAKSKEDGNT----ISYSSYEMLAGHVWRCACKAR-----GLEVDQGTKLYIATDGRA 290

Query: 322 RLNPSAPLNYFGNCVGRVAEFAKASDFMQLE-KGFAFAVEKLSDLVKGIDADAFEGSKE- 379
           RL PS P  YFGN +      A A D   LE K   +A  K+ D +  +D D    + + 
Sbjct: 291 RLRPSLPPGYFGNVIFTATPIAIAGD---LEFKPVWYAASKIHDALARMDNDYLRSALDY 347

Query: 380 -QIAQIMAKLKQGALL-----LSVAGSTHFDVYGSDFGWGRPKKVEIMSIDVSGAVSLAE 433
            ++   +  L +GA       L +       ++ +DFGWGRP  +    I   G   +  
Sbjct: 348 LELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILP 407

Query: 434 SRDXXXXXXXXXXLEKPQMEAFASLFRD 461
           S            L+   M+ F S   D
Sbjct: 408 SPTNDGSMSVAISLQGEHMKLFQSFLYD 435


>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
           (Crystal Form 1)
 pdb|4G22|B Chain B, Structure Of A Lys-Hct Mutant From Coffea Canephora
           (Crystal Form 1)
          Length = 439

 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 126/328 (38%), Gaps = 43/328 (13%)

Query: 146 LTLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQEPSNVNVLPELLTPVF 205
           +T F   G S+GV   H   DG S   F+ SW+ + + L        +V      L P  
Sbjct: 142 VTYFKXGGVSLGVGMRHHAADGFSGLHFINSWSDMARGL--------DVT-----LPPFI 188

Query: 206 DRTLI--KDPKGLYMRYFNMWFSSDPNSKPSLKVLPPVSV--DFNKLVRASFVLTREDIK 261
           DRTL+  +DP     ++            P+L V P  +      +   + F LTRE I 
Sbjct: 189 DRTLLRARDPPQPQFQHIEY------QPPPALAVSPQTAASDSVPETAVSIFKLTREQIS 242

Query: 262 KLRDSINDLNDSKQKQLHLSTYVLTLAYAYVCIVNAKRXXXXXXXXNRDVIFGFPVDYRS 321
            L+    +  ++    +  S+Y +   + + C   A+         ++        D R+
Sbjct: 243 ALKAKSKEDGNT----ISYSSYEMLAGHVWRCACKAR-----GLEVDQGTKLYIATDGRA 293

Query: 322 RLNPSAPLNYFGNCVGRVAEFAKASDFMQLE-KGFAFAVEKLSDLVKGIDADAFEGSKE- 379
           RL PS P  YFGN +      A A D   LE K   +A  K+ D +  +D D    + + 
Sbjct: 294 RLRPSLPPGYFGNVIFTATPIAIAGD---LEFKPVWYAASKIHDALARMDNDYLRSALDY 350

Query: 380 -QIAQIMAKLKQGALL-----LSVAGSTHFDVYGSDFGWGRPKKVEIMSIDVSGAVSLAE 433
            ++   +  L +GA       L +       ++ +DFGWGRP  +    I   G   +  
Sbjct: 351 LELQPDLKALVRGAHTFKXPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILP 410

Query: 434 SRDXXXXXXXXXXLEKPQMEAFASLFRD 461
           S            L+   M+ F S   D
Sbjct: 411 SPTNDGSMSVAISLQGEHMKLFQSFLYD 438


>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
           (Crystal Form 2)
          Length = 439

 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 126/328 (38%), Gaps = 43/328 (13%)

Query: 146 LTLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQEPSNVNVLPELLTPVF 205
           +T F   G S+GV   H   DG S   F+ SW+ + + L        +V      L P  
Sbjct: 142 VTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGL--------DVT-----LPPFI 188

Query: 206 DRTLI--KDPKGLYMRYFNMWFSSDPNSKPSLKVLPPVSV--DFNKLVRASFVLTREDIK 261
           DRTL+  +DP     ++            P+L V P  +      +   + F LTRE I 
Sbjct: 189 DRTLLRARDPPQPQFQHIEY------QPPPALAVSPQTAASDSVPETAVSIFKLTREQIS 242

Query: 262 KLRDSINDLNDSKQKQLHLSTYVLTLAYAYVCIVNAKRXXXXXXXXNRDVIFGFPVDYRS 321
            L+    +  ++    +  S+Y +   + + C   A+         ++        D R+
Sbjct: 243 ALKAKSKEDGNT----ISYSSYEMLAGHVWRCACKAR-----GLEVDQGTKLYIATDGRA 293

Query: 322 RLNPSAPLNYFGNCVGRVAEFAKASDFMQLE-KGFAFAVEKLSDLVKGIDADAFEGSKE- 379
           RL PS P  YFGN +      A A D   LE K   +A  K+ D +  +D D    + + 
Sbjct: 294 RLRPSLPPGYFGNVIFTATPIAIAGD---LEFKPVWYAASKIHDALARMDNDYLRSALDY 350

Query: 380 -QIAQIMAKLKQGALL-----LSVAGSTHFDVYGSDFGWGRPKKVEIMSIDVSGAVSLAE 433
            ++   +  L +GA       L +       ++ +DFGWGRP  +    I   G   +  
Sbjct: 351 LELQPDLKALVRGAHTFKXPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILP 410

Query: 434 SRDXXXXXXXXXXLEKPQMEAFASLFRD 461
           S            L+   M+ F S   D
Sbjct: 411 SPTNDGSMSVAISLQGEHMKLFQSFLYD 438


>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase
 pdb|2BGH|B Chain B, Crystal Structure Of Vinorine Synthase
          Length = 421

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 123/314 (39%), Gaps = 66/314 (21%)

Query: 133 GDVEFHPLVPHCC-LTLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQEP 191
           G +E +  VP    ++ F   G +IGV+  H I D  S   F+ +W   C+   E+    
Sbjct: 130 GKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGETEI---- 185

Query: 192 SNVNVLPELLTPVFDRTLIKDPKGLYMRYFNMWFSSDPNSKPSLKVLPPVSVDFNKLVRA 251
               VLP      FD         L  R+F        ++ PS +++P  +V     V  
Sbjct: 186 ----VLPN-----FD---------LAARHF-----PPVDNTPSPELVPDENV-----VMK 217

Query: 252 SFVLTREDIKKLRDSINDLNDSKQKQLHLSTYVLTLAYAYVCIVNAKRXXXXXXXXNRDV 311
            FV  +E I  LR   +  ++ K    + S   L +AY +  +++  R        N+ V
Sbjct: 218 RFVFDKEKIGALRAQASSASEEK----NFSRVQLVVAYIWKHVIDVTR--AKYGAKNKFV 271

Query: 312 IFGFPVDYRSRLNPSAPLNYFGNCVGRV-----AEFAKASDFMQLEKGFAFAVEKLSD-- 364
           +    V+ RSR+NP  P    GN    +     AE+ K  DF  L      ++EK  D  
Sbjct: 272 VVQ-AVNLRSRMNPPLPHYAMGNIATLLFAAVDAEWDK--DFPDLIGPLRTSLEKTEDDH 328

Query: 365 ---LVKGIDADAFEGSKEQIAQIMAKLKQGALLLSVAGSTHFDVYGSDFGWGRPKKVEIM 421
              L+KG+    +E   ++             LLS         Y  DFGWG+P      
Sbjct: 329 NHELLKGMTC-LYELEPQE-------------LLSFTSWCRLGFYDLDFGWGKPLSACTT 374

Query: 422 SIDVSGAVSLAESR 435
           +     A  L ++R
Sbjct: 375 TFPKRNAALLMDTR 388


>pdb|2JGP|A Chain A, Structure Of The Tycc5-6 Pcp-C Bidomain Of The Tyrocidine
           Synthetase Tycc
          Length = 520

 Score = 34.7 bits (78), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 80/210 (38%), Gaps = 34/210 (16%)

Query: 134 DVEFHPLVPHCCLTLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQEPSN 193
           D+E  PL+    L +  DR + +    HH+I DG S+ + +  W  L +           
Sbjct: 195 DLEVAPLIRVSLLKIGEDR-YVLFTDMHHSISDGVSSGILLAEWVQLYQG---------- 243

Query: 194 VNVLPELLTPVFDRTLIKDP---KGLYMRYFNMWFSSDPNSKPSLKVLPPVSVDFNKLVR 250
            +VLPEL     D  + +        + +    W  +  +  P L  LP    DF +   
Sbjct: 244 -DVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLN-LP---TDFTRPST 298

Query: 251 ASFVLTREDI---KKLRDSINDLNDSKQKQLHLSTYVLTLAYAYVCIVNAKRXXXXXXXX 307
            SF   +  I   K L + ++ L  +    L++   VL  AY  +    A +        
Sbjct: 299 QSFAGDQCTIGAGKALTEGLHQLAQATGTTLYM---VLLAAYNVLLAKYAGQ-------- 347

Query: 308 NRDVIFGFPVDYRSRLNPSAPLNYFGNCVG 337
             D+I G P+  RS  +    +  F N + 
Sbjct: 348 -EDIIVGTPITGRSHADLEPIVGMFVNTLA 376


>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
          Length = 504

 Score = 29.6 bits (65), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)

Query: 206 DRTLIKD-PKGLYMRYFNMWFSSDPNSKPSLKVLPPVSVDFNKLVRASFVLTREDIKKLR 264
           D+ +IK   KG Y   FN W +    +K  +K++  ++ D+NK   A   L    IKK  
Sbjct: 252 DQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLM--LTYDYNKRCTAEEALNSRWIKKY- 308

Query: 265 DSINDLNDSKQKQL 278
              N++N S QK L
Sbjct: 309 --ANNINKSDQKTL 320


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.321    0.137    0.408 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,614,422
Number of Sequences: 62578
Number of extensions: 486792
Number of successful extensions: 910
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 879
Number of HSP's gapped (non-prelim): 9
length of query: 470
length of database: 14,973,337
effective HSP length: 102
effective length of query: 368
effective length of database: 8,590,381
effective search space: 3161260208
effective search space used: 3161260208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)