Query 047419
Match_columns 470
No_of_seqs 140 out of 1244
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 19:13:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047419.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047419hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 3.4E-78 1.2E-82 624.6 39.0 410 1-461 6-438 (439)
2 2xr7_A Malonyltransferase; xen 100.0 1.9E-75 6.6E-80 606.8 33.0 421 3-464 2-451 (453)
3 2e1v_A Acyl transferase; BAHD 100.0 1.3E-74 4.5E-79 600.7 38.3 420 2-464 6-451 (454)
4 2bgh_A Vinorine synthase; VS, 100.0 6.8E-71 2.3E-75 567.1 34.2 394 1-464 3-416 (421)
5 2rkv_A Trichothecene 3-O-acety 100.0 1.2E-61 4E-66 503.2 29.0 390 27-457 4-439 (451)
6 1q9j_A PAPA5, polyketide synth 98.9 3.2E-07 1.1E-11 92.8 25.5 298 24-368 4-313 (422)
7 1l5a_A Amide synthase, VIBH; n 98.4 0.0001 3.5E-09 74.6 25.0 255 64-369 35-305 (436)
8 2jgp_A Tyrocidine synthetase 3 98.1 0.00018 6.2E-09 74.8 21.6 258 64-369 133-401 (520)
9 2xhg_A Tyrocidine synthetase A 98.1 0.0014 4.9E-08 66.7 26.8 301 24-370 14-337 (466)
10 4hvm_A Tlmii; PSI-biology, mid 98.0 0.00011 3.7E-09 75.9 16.7 289 24-369 10-328 (493)
11 2vsq_A Surfactin synthetase su 97.8 0.00085 2.9E-08 77.7 21.1 269 64-369 49-328 (1304)
12 3fot_A 15-O-acetyltransferase; 97.7 0.0013 4.3E-08 68.4 18.6 378 61-464 72-515 (519)
13 3cla_A Type III chloramphenico 72.1 2.5 8.6E-05 38.0 3.4 29 154-182 181-209 (213)
14 2i9d_A Chloramphenicol acetylt 70.9 2.8 9.6E-05 37.8 3.4 28 154-181 189-216 (217)
15 1q23_A Chloramphenicol acetylt 70.3 2.9 0.0001 37.7 3.4 30 154-183 185-214 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 67.8 3.6 0.00012 37.7 3.5 30 154-183 204-233 (239)
17 3rqc_A Probable lipoamide acyl 66.1 3.4 0.00012 37.4 3.0 30 154-183 187-216 (224)
18 1scz_A E2, dihydrolipoamide su 66.0 4 0.00014 37.2 3.4 30 154-183 196-225 (233)
19 1dpb_A Dihydrolipoyl-transacet 66.0 3.9 0.00014 37.5 3.4 30 154-183 208-237 (243)
20 2ii3_A Lipoamide acyltransfera 64.3 4.4 0.00015 37.6 3.4 30 154-183 224-253 (262)
21 3mae_A 2-oxoisovalerate dehydr 58.6 6.5 0.00022 36.4 3.4 30 154-183 210-239 (256)
22 3l60_A Branched-chain alpha-ke 57.1 7.2 0.00024 35.9 3.4 30 154-183 205-234 (250)
23 2kl8_A OR15; structural genomi 52.5 11 0.00039 26.3 3.0 37 63-103 11-47 (85)
24 4hhu_A OR280; engineered prote 45.3 22 0.00075 28.2 3.9 36 64-103 94-129 (170)
25 2xl1_A Arginine attenuator pep 42.4 18 0.00061 19.7 2.1 20 277-296 5-24 (26)
26 4hhu_A OR280; engineered prote 42.1 22 0.00075 28.2 3.5 95 64-183 13-107 (170)
27 3dva_I Dihydrolipoyllysine-res 37.9 6.8 0.00023 39.2 0.0 30 154-183 391-420 (428)
28 1x93_A Hypothetical protein HP 34.7 38 0.0013 22.2 3.1 22 249-270 2-23 (55)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=3.4e-78 Score=624.63 Aligned_cols=410 Identities=24% Similarity=0.347 Sum_probs=333.4
Q ss_pred CeEEEEeceeEEEeCCCCCCCCCCCceeecccccccccCCCcceEEEEeecCCCCCCchhhhHHHHHHHHHHHHhhhccC
Q 047419 1 MAAKVVEQEVTKVTPLRSHSSSAQELTLPLTYFDILWLKFPPVERIFFYEITGLASDFFNSEIVPRLKHSLSLTLLHYLP 80 (470)
Q Consensus 1 ~~v~v~~~~~~~V~P~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~ 80 (470)
|+|+|. ++++|+|+. |+ +.+.++||+||+.+. ..|++.++||+.++ ... ...+++||+||+++|++|||
T Consensus 6 ~~V~i~--~~~~V~P~~---~t-p~~~~~LS~lD~~~~-~~~~~~~~~y~~~~-~~~---~~~~~~Lk~sLs~~L~~f~p 74 (439)
T 4g22_A 6 MKIEVK--ESTMVRPAQ---ET-PGRNLWNSNVDLVVP-NFHTPSVYFYRPTG-SSN---FFDAKVLKDALSRALVPFYP 74 (439)
T ss_dssp CCEEEE--EEEEECCSS---CC-CCCEECCCHHHHSCC-TTCCCEEEEECCCS-CTT---TTCHHHHHHHHHHHTTTTGG
T ss_pred eEEEEe--eeEEEeCCC---CC-CCCeecCChhHhCcc-ccceeeEEEEcCCC-Ccc---ccHHHHHHHHHHHHHhhccc
Confidence 678999 999999999 77 577899999999864 46999999998754 322 24689999999999999999
Q ss_pred CCceEeecCCCCCCCCCcEEEecCCCCCCCeEEEEEEecCCCcccccCCCCCCCCccCCCc------------cc--cee
Q 047419 81 LAGSIVWRPQAQDQQQQPVIYYSPDDDDYGVSVTVAVSCNNDFSHLSGNGIRGDVEFHPLV------------PH--CCL 146 (470)
Q Consensus 81 LaGrl~~~~~~~~~~g~~~i~~~~~~~~~gv~~~~a~~~~~~~~~l~~~~p~~~~~~~~l~------------P~--vQv 146 (470)
|||||+.+++ |+++|+|| ++ ||.|++++ ++.+++|+....|. ..+..|+ |. +||
T Consensus 75 lAGRl~~~~~-----g~~~i~c~-~~---Gv~fv~A~-~d~~l~~l~~~~p~--~~~~~l~p~~~~~~~~~~~pll~vQv 142 (439)
T 4g22_A 75 MAGRLKRDED-----GRIEIECN-GE---GVLFVEAE-SDGVVDDFGDFAPT--LELRRLIPAVDYSQGISSYALLVLQV 142 (439)
T ss_dssp GGCEEEECTT-----SCEEEECC-CC---CEEEEEEE-ESSCGGGGTTCCCC--GGGGGGSCCCCTTSCTTSSCSEEEEE
T ss_pred cceeeeeCCC-----CCEEEEEC-CC---CCEEEEEE-cCCcHHHhcCCCCC--HHHHhcCCCCCcccccccCceeEEEE
Confidence 9999998875 89999997 67 99999999 89999998431221 1222232 22 999
Q ss_pred eeeCCCcEEEEeeceeeccchhhHHHHHHHHHHHHhhhhccccCCCcccCCCCCCCccccccccc--CCcchhhhhhhcc
Q 047419 147 TLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQEPSNVNVLPELLTPVFDRTLIK--DPKGLYMRYFNMW 224 (470)
Q Consensus 147 t~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~~~~~~~~~~~~~~~~~~~~P~~dr~~l~--~p~~~~~~~~~~~ 224 (470)
|+|+|||++||+++||.++||.|+.+||++||++||| .. . ...|++||+.+. +|+..... +.+|
T Consensus 143 T~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg-~~----------~--~~~P~~dr~~l~~~~pp~~~~~-~~~~ 208 (439)
T 4g22_A 143 TYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARG-LD----------V--TLPPFIDRTLLRARDPPQPQFQ-HIEY 208 (439)
T ss_dssp EECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHHHTT-CC----------C--SSCCBCCGGGGCCCSSCCCSSC-CGGG
T ss_pred EEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHHhCC-CC----------C--CCCCccccccccCCCCCCCCcC-cccc
Confidence 9999999999999999999999999999999999997 32 1 256899999876 34433211 2234
Q ss_pred ccCCCCCCCCcccCCCCcCCcCCceEEEEEeCHHHHHHHHHHHhccccccccCCccchhhHHHHHHHHHhhhcccchhhh
Q 047419 225 FSSDPNSKPSLKVLPPVSVDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQLHLSTYVLTLAYAYVCIVNAKREEEAA 304 (470)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~~~~~~~~~~~~~~~St~d~l~AllW~~i~rAr~~~~~~ 304 (470)
. ..+.... ...+....+..+++.++|+|++++|++||+.+.+ +.+..++|+||+|+|++|+|++|||.+++
T Consensus 209 ~--~~~~~~~-~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~----~~~~~~~St~dal~A~iWr~~~rAr~~~~-- 279 (439)
T 4g22_A 209 Q--PPPALAV-SPQTAASDSVPETAVSIFKLTREQISALKAKSKE----DGNTISYSSYEMLAGHVWRCACKARGLEV-- 279 (439)
T ss_dssp S--CCC----------------CEEEEEEEECHHHHHHHHHGGGG----GGCCCCCCHHHHHHHHHHHHHHHHTTCCT--
T ss_pred c--CCCCCcc-cccccccCCcccceEEEEEECHHHHHHHHHHhhc----cCCCCCccHHHHHHHHHHHHHHHhcCCCC--
Confidence 3 1110000 0000001111468899999999999999999986 32346799999999999999999998765
Q ss_pred hhcCCeEEEEEEecccCcCCCCCCCCCccccccceeeeeeccccccccccHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH
Q 047419 305 AAANRDVIFGFPVDYRSRLNPSAPLNYFGNCVGRVAEFAKASDFMQLEKGFAFAVEKLSDLVKGIDADAFEGSKEQIAQI 384 (470)
Q Consensus 305 ~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~~~L~~~A~~ir~av~~~~~~~~~~~~~~~~~~ 384 (470)
++.+.+.++||+|+|++||+|++||||++..+.+.++++||.+ ++|+++|..||+++.+++++|+++.++|++..
T Consensus 280 ---~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~--~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~ 354 (439)
T 4g22_A 280 ---DQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPIAIAGDLEF--KPVWYAASKIHDALARMDNDYLRSALDYLELQ 354 (439)
T ss_dssp ---TCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCEEEHHHHHH--SCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTC
T ss_pred ---CCcEEEEEEEcccCCCCCCCCCCcccceeehhhcceEHHHHhh--CcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhC
Confidence 7899999999999999999999999999999999999999987 89999999999999999999999999998754
Q ss_pred HHH-------hhcCccEEEEecCCCCcccccccCCCccceEEeeeecCCceEEEeeccCCCCcEEEEEEeCHHHHHHHHH
Q 047419 385 MAK-------LKQGALLLSVAGSTHFDVYGSDFGWGRPKKVEIMSIDVSGAVSLAESRDGCGGVEVGVVLEKPQMEAFAS 457 (470)
Q Consensus 385 ~~~-------~~~~~~~~~~tsw~~~~~y~~DFG~G~P~~v~~~~~~~~g~v~i~p~~~g~gg~ev~v~L~~~~m~~l~~ 457 (470)
++. ...+..++.+|||++|++|++|||||+|+++++...+.+|.++++|+++++||++|.|||++++|++|++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 355 PDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp SCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred ccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 211 1111267999999999999999999999999987666789999999987789999999999999999999
Q ss_pred HHHh
Q 047419 458 LFRD 461 (470)
Q Consensus 458 ~~~~ 461 (470)
+|++
T Consensus 435 ~~~~ 438 (439)
T 4g22_A 435 FLYD 438 (439)
T ss_dssp HHTC
T ss_pred Hhcc
Confidence 9875
No 2
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1.9e-75 Score=606.85 Aligned_cols=421 Identities=37% Similarity=0.640 Sum_probs=335.6
Q ss_pred EEEEeceeEEEeCCCCCCCCCCCceeecccccccccCCCcceEEEEeecCCCCCCchhhhHHHHHHHHHHHHhhhccCCC
Q 047419 3 AKVVEQEVTKVTPLRSHSSSAQELTLPLTYFDILWLKFPPVERIFFYEITGLASDFFNSEIVPRLKHSLSLTLLHYLPLA 82 (470)
Q Consensus 3 v~v~~~~~~~V~P~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~La 82 (470)
|+|. ++++|+|+. ++++.+.++||+||+.+.+++|++.+|||+.+. +.++|.++++++||+||+++|++|||||
T Consensus 2 v~v~--~~~~V~P~~---~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs~~L~~~~plA 75 (453)
T 2xr7_A 2 ASVI--EQCQVVPSP---GSATELTLPLTYFDHVWLAFHRMRRILFYKLPI-SRPDFVQTIIPTLKDSLSLTLKYYLPLA 75 (453)
T ss_dssp CEEE--EESCCCCCT---TCCSEEEEECCHHHHGGGGSCCEEEEEEEECCC-CSHHHHHTHHHHHHHHHHHHHTTSGGGG
T ss_pred eEEE--EEEEecCCC---CCCCCceECCCHHHhhhhhcCCccEEEEEeCCC-CCchhHHHHHHHHHHHHHHHhhhccccC
Confidence 8899 999999998 654679999999999866666999999999754 3222235679999999999999999999
Q ss_pred ceEeecCCCCCCCCCcEEEecCCCCCCCeEEEEEEecCCCcccccCCCCCCCCccCCC---------------ccc--ce
Q 047419 83 GSIVWRPQAQDQQQQPVIYYSPDDDDYGVSVTVAVSCNNDFSHLSGNGIRGDVEFHPL---------------VPH--CC 145 (470)
Q Consensus 83 Grl~~~~~~~~~~g~~~i~~~~~~~~~gv~~~~a~~~~~~~~~l~~~~p~~~~~~~~l---------------~P~--vQ 145 (470)
|||+.+++ .+|+++|+|++++ ||.|++++ ++.+++++.++.+.+...+..| .|. +|
T Consensus 76 GRl~~~~~---~~g~~~i~c~~~~---gv~fv~A~-~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQ 148 (453)
T 2xr7_A 76 GNVACPQD---WSGYPELRYVTGN---SVSVIFSE-SDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQ 148 (453)
T ss_dssp SCCEEESS---TTCCCEEEEETTC---CCEEEEEE-CCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEE
T ss_pred eeEEccCC---CCCCEEEEecCCC---ceEEEEEe-cCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEE
Confidence 99998751 0289999998557 99999999 8999999864322111122222 233 89
Q ss_pred eeeeCCCcEEEEeeceeeccchhhHHHHHHHHHHHHh-hhhccccCCCcccCCCCCCCcccccccccCCcchhhhhhhcc
Q 047419 146 LTLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCK-QLAELEQEPSNVNVLPELLTPVFDRTLIKDPKGLYMRYFNMW 224 (470)
Q Consensus 146 vt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r-~~~~~~~~~~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~ 224 (470)
||+|+|||++||+++||+++||.|+.+|+++||++|| |.... ..++.+.|++||+.+..|+.+...+...|
T Consensus 149 vT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~--------~~~~~~~P~~dr~~l~~p~~~~~~~~~~~ 220 (453)
T 2xr7_A 149 VTLFPNHGISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQ--------FLANEFIPFYDRSVIKDPNGVGMSIWNEM 220 (453)
T ss_dssp EEEETTTEEEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGG--------GSCGGGSCBCCCSSSCCSSCHHHHTTTTG
T ss_pred EEEccCCcEEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcc--------cCCCCCCCccccccccCCCCcchHHHHhc
Confidence 9999999999999999999999999999999999999 63120 02234578999999887765543322222
Q ss_pred ccCCCCCCCCc-ccCCCCcCCcCCceEEEEEeCHHHHHHHHHHHhccccccccCCccchhhHHHHHHHHHhhhcccc---
Q 047419 225 FSSDPNSKPSL-KVLPPVSVDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQLHLSTYVLTLAYAYVCIVNAKRE--- 300 (470)
Q Consensus 225 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~~~~~~~~~~~~~~~St~d~l~AllW~~i~rAr~~--- 300 (470)
.. .+ .. .... ...+ .+.+.++|+|++++|++||+.+.+.. ....++|+||+|+|++|+|++|||..
T Consensus 221 ~~--~~---~~~~~~~-~~~~-~~~~~~~f~f~~~~i~~Lk~~a~~~~---~~~~~~St~~~l~A~lW~~~~~Ar~~~~~ 290 (453)
T 2xr7_A 221 KK--YK---HMMKMSD-VVTP-PDKVRGTFIITRHDIGKLKNLVLTRR---PKLTHVTSFTVTCAYVWTCIIKSEAATGE 290 (453)
T ss_dssp GG--CT---TTSCCSC-CCCC-CSCCCEEEEECHHHHHHHHHHHHHHS---CCCSCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cc--cC---Ccccccc-ccCC-CCceEEEEEECHHHHHHHHHHHhhcC---CCCCcccHHHHHHHHHHHHHHHHhccccc
Confidence 10 00 00 0000 0012 45778999999999999999997621 11268999999999999999999976
Q ss_pred --hhhhhhcCCeEEEEEEecccCcCCCCCCCCCccccccceeeeeeccccccccccHHHHHHHHHHHHHh--hhhh-hhh
Q 047419 301 --EEAAAAANRDVIFGFPVDYRSRLNPSAPLNYFGNCVGRVAEFAKASDFMQLEKGFAFAVEKLSDLVKG--IDAD-AFE 375 (470)
Q Consensus 301 --~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~~~L~~~A~~ir~av~~--~~~~-~~~ 375 (470)
++ ++.+.+.++||+|+|++||+|++||||++..+.+.++++||.+ +++|+++|..||+++.+ .+++ +++
T Consensus 291 ~~~~-----~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~-~~~l~~~a~~Ir~ai~~~~~~~e~~~~ 364 (453)
T 2xr7_A 291 EIDE-----NGMEFFGCAADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAG-KEGFTIAVELIGEAIRKRMKDEEWILS 364 (453)
T ss_dssp CCCT-----TSEEEEEEECCTTSCSSSCCCTTBCSCCCCEEEEEEEHHHHTS-SSHHHHHHHHHHHHHTTSSSCHHHHHS
T ss_pred cCCC-----CcceEEEEEecccccCCCCCCcccccceeeeeeeeeeHHHhcC-cchHHHHHHHHHHHHHhhccCCccchh
Confidence 33 7899999999999999999999999999999999999999984 37999999999999999 5777 898
Q ss_pred hhHHHHHHHHHHhhcCccEEEEecCCCCcccccccCCCccceEEeeeecCCc--eEEEeeccCCCCcEEEEEEeCHHHHH
Q 047419 376 GSKEQIAQIMAKLKQGALLLSVAGSTHFDVYGSDFGWGRPKKVEIMSIDVSG--AVSLAESRDGCGGVEVGVVLEKPQME 453 (470)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~tsw~~~~~y~~DFG~G~P~~v~~~~~~~~g--~v~i~p~~~g~gg~ev~v~L~~~~m~ 453 (470)
+ +|++..+.+.. . ..+.+|||++|++|++|||||+|.++++...+.+| .++++|+++++||++|.|||++++|+
T Consensus 365 ~--~~~~~~~~~~~-~-~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~ 440 (453)
T 2xr7_A 365 G--SWFKEYDKVDA-K-RSLSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMN 440 (453)
T ss_dssp S--CTTSCCCCSCG-G-GEEEECSCSSCCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHH
T ss_pred h--HHHHHHHhhcc-C-CcEEEeccccCCccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHH
Confidence 8 77754322222 2 58999999999999999999999999987666778 88898988888999999999999999
Q ss_pred HHHHHHHhccc
Q 047419 454 AFASLFRDGLD 464 (470)
Q Consensus 454 ~l~~~~~~~~~ 464 (470)
+|+++|.+++.
T Consensus 441 ~f~~~~~~~~~ 451 (453)
T 2xr7_A 441 AFAAMFTHGIS 451 (453)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999998764
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1.3e-74 Score=600.65 Aligned_cols=420 Identities=33% Similarity=0.626 Sum_probs=328.5
Q ss_pred eEEEEeceeEEEeCCCCCCCCCCCceeecccccccccCCCcceEEEEeecCCCCCCchhhhHHHHHHHHHHHHhhhccCC
Q 047419 2 AAKVVEQEVTKVTPLRSHSSSAQELTLPLTYFDILWLKFPPVERIFFYEITGLASDFFNSEIVPRLKHSLSLTLLHYLPL 81 (470)
Q Consensus 2 ~v~v~~~~~~~V~P~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~L 81 (470)
+|+|. ++++|+|+. ++++.+.++||+||+.+..++|++.++||+.++ +.++|.+.++++||+||+++|++||||
T Consensus 6 ~v~v~--~~~~V~P~~---~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs~~L~~~~pl 79 (454)
T 2e1v_A 6 ILTVL--EQSQVSPPP---DTLGDKSLQLTFFDFFWLRSPPINNLFFYELPI-TRSQFTETVVPNIKHSLSITLKHFYPF 79 (454)
T ss_dssp CEEEE--EEEEECCCT---TSCCCEEEECCHHHHTTTTCCCEEEEEEEECCC-CHHHHHHTHHHHHHHHHHHHHTTCGGG
T ss_pred eEEEE--EEEEEeCCC---CCCCCceecCchHHhhhhccCCccEEEEEeCCC-CcchhhHHHHHHHHHHHHHHhhhcccc
Confidence 47888 999999987 654689999999999866656999999999754 322223467999999999999999999
Q ss_pred CceEe-ecCCCCCCCCCcEEEecCCCCCCCeEEEEEEecCCCcccccCCCCCCCCccCCCc---------------cc--
Q 047419 82 AGSIV-WRPQAQDQQQQPVIYYSPDDDDYGVSVTVAVSCNNDFSHLSGNGIRGDVEFHPLV---------------PH-- 143 (470)
Q Consensus 82 aGrl~-~~~~~~~~~g~~~i~~~~~~~~~gv~~~~a~~~~~~~~~l~~~~p~~~~~~~~l~---------------P~-- 143 (470)
||||+ .+++ +|+++|+|++++ ||.|++++ ++.+++++.++.+.+...+..|+ |.
T Consensus 80 AGRl~~~~~~----~g~~~i~c~~~~---gv~fv~A~-~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~ 151 (454)
T 2e1v_A 80 VGKLVVYPAP----TKKPEICYVEGD---SVAVTFAE-CNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFS 151 (454)
T ss_dssp GSEEEECSSS----SSCCEEEECTTC---CEEEEEEE-ECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEE
T ss_pred ceeeeeccCC----CCCEEEEECCCC---cEEEEEEE-eCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEE
Confidence 99998 6533 389999998557 99999999 89999998643221111122221 33
Q ss_pred ceeeeeCCCcEEEEeeceeeccchhhHHHHHHHHHHHHh-hhh-ccccCCCcccCCCCCCCcccccccccCCcchhhhhh
Q 047419 144 CCLTLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCK-QLA-ELEQEPSNVNVLPELLTPVFDRTLIKDPKGLYMRYF 221 (470)
Q Consensus 144 vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r-~~~-~~~~~~~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~ 221 (470)
+|||+|+|||++||+++||+++||.|+.+|+++||++|| |.. .. ..++.+.|++|| .+.+|+ +...+.
T Consensus 152 vQvT~f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~--------~~~~~~~P~~dr-~l~~p~-~~~~~~ 221 (454)
T 2e1v_A 152 VQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDES--------FLANGTRPLYDR-IIKYPM-LDEAYL 221 (454)
T ss_dssp EEEEEETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHH--------HHHHSCCCBCCC-CCCCHH-HHHHHH
T ss_pred EEEEEecCCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccc--------cCCCCCCCcccc-cCCCCC-cchHHH
Confidence 899999999999999999999999999999999999999 631 10 011134689999 776654 433322
Q ss_pred hccccCCCCCCCCccc-CCCCcCCcCCceEEEEEeCHHHHHHHHHHHhccccccccCCccchhhHHHHHHHHHhhhcccc
Q 047419 222 NMWFSSDPNSKPSLKV-LPPVSVDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQLHLSTYVLTLAYAYVCIVNAKRE 300 (470)
Q Consensus 222 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~~~~~~~~~~~~~~~St~d~l~AllW~~i~rAr~~ 300 (470)
.+|. ..... ..+ +.....+ .+.+.++|+|++++|++||+.+.+.. ....++|+||+|+|++|+|++|||
T Consensus 222 ~~~~--~~~~~--~~~~~~~~~~~-~~~~~~~f~f~~~~i~~LK~~a~~~~---~~~~~~St~d~l~A~lWr~~~~Ar-- 291 (454)
T 2e1v_A 222 KRAK--VESFN--EDYVTQSLAGP-SDKLRATFILTRAVINQLKDRVLAQL---PTLEYVSSFTVACAYIWSCIAKSR-- 291 (454)
T ss_dssp HHTT--CTTHH--HHCCCCCCCCC-CCEEEEEEEECHHHHHHHHHHHHHHC---TTCSCCCHHHHHHHHHHHHHHHHH--
T ss_pred Hhhh--ccccc--cccCcccCCCC-CCceEEEEEECHHHHHHHHHHHhhcC---CCCCcccHHHHHHHHHHHHHhhhc--
Confidence 2232 00000 000 0000012 46779999999999999999997621 112679999999999999999999
Q ss_pred hhhhhhcCCeEEEEEEecccCcCCCCCCCCCccccccceeeeeeccccccccccHHHHHHHHHHHHHhhh----hhhhhh
Q 047419 301 EEAAAAANRDVIFGFPVDYRSRLNPSAPLNYFGNCVGRVAEFAKASDFMQLEKGFAFAVEKLSDLVKGID----ADAFEG 376 (470)
Q Consensus 301 ~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~~~L~~~A~~ir~av~~~~----~~~~~~ 376 (470)
+ ++.+.+.++||+|+|++||+|++||||++..+.+.++++||.+ +++|+++|..||+++.+++ ++++++
T Consensus 292 -~-----~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~-~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~ 364 (454)
T 2e1v_A 292 -N-----DKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIG-KEGFITAAKLIGENLHKTLTDYKDGVLKD 364 (454)
T ss_dssp -C-----CSEEEEEEEEECGGGSSSCCCTTBCSCCEEEEEEEEEGGGTSH-HHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred -C-----CCceEEEEEecchhccCCCCCcccccceeeeEEeecchhhccc-cccHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 4 7899999999999999999999999999999999999999983 3799999999999999996 566777
Q ss_pred -hHHHHHHHHHHhhcCccEEEEecCCCCcccccccCCCccceEEeeeecCCceEEEeeccCCCCcEEEEEEeCHHHHHHH
Q 047419 377 -SKEQIAQIMAKLKQGALLLSVAGSTHFDVYGSDFGWGRPKKVEIMSIDVSGAVSLAESRDGCGGVEVGVVLEKPQMEAF 455 (470)
Q Consensus 377 -~~~~~~~~~~~~~~~~~~~~~tsw~~~~~y~~DFG~G~P~~v~~~~~~~~g~v~i~p~~~g~gg~ev~v~L~~~~m~~l 455 (470)
+.+|++....+. +...+.+|||++|++|++|||||+|.++++...+.+|.++++|+++++||++|.|||++++|++|
T Consensus 365 ~~~~~~~~~~~~~--~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f 442 (454)
T 2e1v_A 365 DMESFNDLVSEGM--PTTMTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDF 442 (454)
T ss_dssp -----CHHHHHCC--CSEEEEEECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHH
T ss_pred HHHHHHHHHHhhc--CCceEEEecCCCCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHH
Confidence 778877543322 22589999999999999999999999999876667899999998888899999999999999999
Q ss_pred HHHHHhccc
Q 047419 456 ASLFRDGLD 464 (470)
Q Consensus 456 ~~~~~~~~~ 464 (470)
+++|.+++.
T Consensus 443 ~~~~~~~~~ 451 (454)
T 2e1v_A 443 VHIFDDGLK 451 (454)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHH
Confidence 999998874
No 4
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=6.8e-71 Score=567.06 Aligned_cols=394 Identities=24% Similarity=0.333 Sum_probs=315.7
Q ss_pred CeEEEEeceeEEEeCCCCCCCCCC-CceeecccccccccCCCcceEEEEeecCCCCCCchhhhHHHHHHHHHHHHhhhcc
Q 047419 1 MAAKVVEQEVTKVTPLRSHSSSAQ-ELTLPLTYFDILWLKFPPVERIFFYEITGLASDFFNSEIVPRLKHSLSLTLLHYL 79 (470)
Q Consensus 1 ~~v~v~~~~~~~V~P~~~~~~~~~-~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p 79 (470)
|+|+|. ++++|+|+. |++. .+.++||+||+... ..|++.++||+.++ ......+.++++||+||+++|++||
T Consensus 3 m~v~v~--~~~~V~P~~---ptp~~~~~~~LS~lD~~~~-~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs~~L~~~~ 75 (421)
T 2bgh_A 3 PQMEKV--SEELILPSS---PTPQSLKCYKISHLDQLLL-TCHIPFILFYPNPL-DSNLDPAQTSQHLKQSLSKVLTHFY 75 (421)
T ss_dssp -CEEEE--EEEEEECSS---CCCTTSCCCBCCHHHHTSC-SSEEEEEEEECCCS-SCCCCHHHHHHHHHHHHHHHTTTSG
T ss_pred ceEEEe--eeEEEeCCC---CCCCCCcccCCChHHhccc-ccccceEEEEeCCC-ccccchhhHHHHHHHHHHHHhhhcc
Confidence 578888 999999998 7754 57999999999754 46999999999754 2110134689999999999999999
Q ss_pred CCCceEeecCCCCCCCCCcEEEecCCCCCCCeEEEEEEecCCCcccccCCCCCCCCccCCC---------------ccc-
Q 047419 80 PLAGSIVWRPQAQDQQQQPVIYYSPDDDDYGVSVTVAVSCNNDFSHLSGNGIRGDVEFHPL---------------VPH- 143 (470)
Q Consensus 80 ~LaGrl~~~~~~~~~~g~~~i~~~~~~~~~gv~~~~a~~~~~~~~~l~~~~p~~~~~~~~l---------------~P~- 143 (470)
||||||+ ++++|+|+ ++ ||.|++++ ++.+++++....|. ...+..| .|.
T Consensus 76 plAGRl~---------~~~~i~c~-~~---Gv~fv~A~-~d~~l~~~~~~~p~-~~~~~~l~p~~~~~~~~~~~~~~pll 140 (421)
T 2bgh_A 76 PLAGRIN---------VNSSVDCN-DS---GVPFVEAR-VQAQLSQAIQNVVE-LEKLDQYLPSAAYPGGKIEVNEDVPL 140 (421)
T ss_dssp GGGSEEE---------TTTEEECC-CC---CEEEEEEE-ESSCHHHHHSCCSS-GGGGGGGSSSCSSSSSSSCCCTTCSE
T ss_pred hhccccC---------CCcEEEEc-CC---ceEEEEEE-EcCCHHHHhccCCC-hHHHHhcCCCCCCccccccccCCceE
Confidence 9999996 24899998 57 99999999 89998888543221 1111111 233
Q ss_pred -ceeeeeCCCcEEEEeeceeeccchhhHHHHHHHHHHHHhhhhccccCCCcccCCCCCCCccccc-ccccCC-cchhhhh
Q 047419 144 -CCLTLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQEPSNVNVLPELLTPVFDR-TLIKDP-KGLYMRY 220 (470)
Q Consensus 144 -vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~~~~~~~~~~~~~~~~~~~~P~~dr-~~l~~p-~~~~~~~ 220 (470)
+|||+|+|||++||+++||+++||.|+.+|+++||++|||... + ..|++|| +.+..+ ...
T Consensus 141 ~vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~-----------~--~~P~~dr~~~l~p~~~~~---- 203 (421)
T 2bgh_A 141 AVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGETE-----------I--VLPNFDLAARHFPPVDNT---- 203 (421)
T ss_dssp EEEEEECTTSCEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCSC-----------C--CCCBCSHHHHHSCCCTTC----
T ss_pred EEEEEEEcCCCEEEEEEeeEEechHHHHHHHHHHHHHHhcCCCC-----------C--CCCccccccccCCCcccC----
Confidence 9999999999999999999999999999999999999998321 2 4688998 654322 110
Q ss_pred hhccccCCCCCCCCcccCCCCcCCcCCceEEEEEeCHHHHHHHHHHHhccccccccCCccchhhHHHHHHHHHhhhcccc
Q 047419 221 FNMWFSSDPNSKPSLKVLPPVSVDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQLHLSTYVLTLAYAYVCIVNAKRE 300 (470)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~~~~~~~~~~~~~~~St~d~l~AllW~~i~rAr~~ 300 (470)
+ .+ + ...+ .+.++++|+|++++|++||+.+.+ +....++|+||+|+|++|+|++|||..
T Consensus 204 --------~-~~------~-~~~~-~~~~~~~f~f~~~~i~~LK~~a~~----~~~~~~~St~d~l~A~iW~~~~~Ar~~ 262 (421)
T 2bgh_A 204 --------P-SP------E-LVPD-ENVVMKRFVFDKEKIGALRAQASS----ASEEKNFSRVQLVVAYIWKHVIDVTRA 262 (421)
T ss_dssp --------C-CC------C-CCCC-SSEEEEEEEECHHHHHHHHHHTC---------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------C-CC------c-cCCc-cceEEEEEEECHHHHHHHHHHhhc----cCCCCCCchhHhHHHHHHHHHHHHhcc
Confidence 0 00 0 0012 568899999999999999999876 322368999999999999999999875
Q ss_pred hhhhhhcCCeEEEEEEecccCcCCCCCCCCCccccccceeeeeeccccccccccHHHHHHHHHHHHHhhhhhhhhhhHHH
Q 047419 301 EEAAAAANRDVIFGFPVDYRSRLNPSAPLNYFGNCVGRVAEFAKASDFMQLEKGFAFAVEKLSDLVKGIDADAFEGSKEQ 380 (470)
Q Consensus 301 ~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~~~L~~~A~~ir~av~~~~~~~~~~~~~~ 380 (470)
.. +.++.+.+.++||+|+|++||+|++||||++..+.+.+++++ + .+|+++|..||+++.++++++++...++
T Consensus 263 ~~---~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~--~--~~l~~~a~~ir~ai~~~~~~~~~~~~~~ 335 (421)
T 2bgh_A 263 KY---GAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEW--D--KDFPDLIGPLRTSLEKTEDDHNHELLKG 335 (421)
T ss_dssp HS---CCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTC--C--CCGGGGHHHHHHHTCCCSSCHHHHHHHH
T ss_pred cC---CCCCceEEEEEecCccccCCCCCCCccceEEEEEEEEecccc--c--ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 026789999999999999999999999999999999888875 4 8999999999999999999999988777
Q ss_pred HHHHHHHhhcCccEEEEecCCCCcccccccCCCccceEEeeeecCCceEEEeeccCCCCcEEEEEEeCHHHHHHHHHHHH
Q 047419 381 IAQIMAKLKQGALLLSVAGSTHFDVYGSDFGWGRPKKVEIMSIDVSGAVSLAESRDGCGGVEVGVVLEKPQMEAFASLFR 460 (470)
Q Consensus 381 ~~~~~~~~~~~~~~~~~tsw~~~~~y~~DFG~G~P~~v~~~~~~~~g~v~i~p~~~g~gg~ev~v~L~~~~m~~l~~~~~ 460 (470)
.+..... +. ...+.+|||+++++|++|||||+|.++++...+.+|+++++|++++ +|++|.|+|++++|++|++++.
T Consensus 336 ~~~~~~~-~~-~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~~~p~~~~-~gi~v~v~L~~~~m~~f~~e~~ 412 (421)
T 2bgh_A 336 MTCLYEL-EP-QELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSG-DGVEAWLPMAEDEMAMLPVELL 412 (421)
T ss_dssp HHHHHTS-CG-GGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEEEEECTTS-SSEEEEEEEEHHHHHHSCHHHH
T ss_pred HHHhhcc-CC-CCeEEEeccccCCCcccccCCCccCeecccccCcCCEEEEEecCCC-CeEEEEEEcCHHHHHHHHHHHH
Confidence 6542221 11 2579999999999999999999999999876667899999998874 5899999999999999999888
Q ss_pred hccc
Q 047419 461 DGLD 464 (470)
Q Consensus 461 ~~~~ 464 (470)
++..
T Consensus 413 ~~~~ 416 (421)
T 2bgh_A 413 SLVD 416 (421)
T ss_dssp TTBC
T ss_pred Hhhc
Confidence 7753
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=1.2e-61 Score=503.17 Aligned_cols=390 Identities=14% Similarity=0.130 Sum_probs=293.1
Q ss_pred eeeccccccccc-CCCcceEEEEeecCCCCCCchhhhHHHHHHHHHHHHhhhccCCCceEeecCCCCCCCCCcEEEecCC
Q 047419 27 TLPLTYFDILWL-KFPPVERIFFYEITGLASDFFNSEIVPRLKHSLSLTLLHYLPLAGSIVWRPQAQDQQQQPVIYYSPD 105 (470)
Q Consensus 27 ~~~LS~lD~~~~-~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~~g~~~i~~~~~ 105 (470)
.++||+|||+.+ ...|++.++||+.++ +.+ .++++++||+||+++|++||||||||+.++..++.+|+++|.|+ +
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~-~~~--~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~-~ 79 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSD-SSQ--YPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPF-E 79 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSC-GGG--HHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECC-C
T ss_pred cccCChhhcCccccccceeEEEEEECCC-CCC--HHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeec-C
Confidence 468999999851 235999999999643 212 25679999999999999999999999987531122489999986 4
Q ss_pred CCCCCeEEEEEEecCC-----CcccccC-CCCCCCC---cc--------------CCCccc--ceeeeeCCCcEEEEeec
Q 047419 106 DDDYGVSVTVAVSCNN-----DFSHLSG-NGIRGDV---EF--------------HPLVPH--CCLTLFPDRGFSIGVSS 160 (470)
Q Consensus 106 ~~~~gv~~~~a~~~~~-----~~~~l~~-~~p~~~~---~~--------------~~l~P~--vQvt~f~~GG~~L~~~~ 160 (470)
+ ++.|++++ ++. ++++|.. +.|.... .+ ..-.|. +|||+| |||++||+++
T Consensus 80 ~---~~~~~va~-~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~ 154 (451)
T 2rkv_A 80 D---VPRVVVKD-LRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNG 154 (451)
T ss_dssp S---SCEEEEEE-CTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEE
T ss_pred C---CCeEEEEe-CCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeee
Confidence 5 66799888 553 5666542 2221100 01 001343 999988 9999999999
Q ss_pred eeeccchhhHHHHHHHHHHHHhhhhccccCCCcccCCCC--CCCcccccccccC-----CcchhhhhhhccccCCCCCCC
Q 047419 161 HHAILDGKSTTMFVKSWAYLCKQLAELEQEPSNVNVLPE--LLTPVFDRTLIKD-----PKGLYMRYFNMWFSSDPNSKP 233 (470)
Q Consensus 161 ~H~v~Dg~g~~~fl~~wa~~~r~~~~~~~~~~~~~~~~~--~~~P~~dr~~l~~-----p~~~~~~~~~~~~~~~~~~~~ 233 (470)
||+++||.|+.+||++||++|||.. .+. ...|++||+.+.. ++..... +.+|. ..+.
T Consensus 155 ~H~v~Dg~g~~~Fl~awa~~~rg~~-----------~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~-~~~~~--~~~~-- 218 (451)
T 2rkv_A 155 QHGAMDMVGQDAVIRLLSKACRNDP-----------FTEEEMTAMNLDRKTIVPYLENYTIGPEVD-HQIVK--ADVA-- 218 (451)
T ss_dssp ETTTCCHHHHHHHHHHHHHHHHTCC-----------CCHHHHHHTTCCSTTSSCCCTTCCCCGGGT-TCBCC--TTSC--
T ss_pred hhccccHHHHHHHHHHHHHHhcCCC-----------CCccccccccCchhhccccccccCCCcccc-ccccC--CCCC--
Confidence 9999999999999999999999732 111 1247888874431 1111111 11222 1100
Q ss_pred CcccCCCCcCCcCCceEEEEEeCHHHHHHHHHHHhccccccccCCccchhhHHHHHHHHHhhhcc-c-chhhhhhcCCeE
Q 047419 234 SLKVLPPVSVDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQLHLSTYVLTLAYAYVCIVNAK-R-EEEAAAAANRDV 311 (470)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~~~~~~~~~~~~~~~St~d~l~AllW~~i~rAr-~-~~~~~~~~~~~~ 311 (470)
... . . .+..++++++|+|++++|++||+.+.+.+. ..+.++|+||+|+|++|+|++||| . .++ ++.+
T Consensus 219 -~~~-~-~-~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~--~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~-----~~~~ 287 (451)
T 2rkv_A 219 -GGD-A-V-LTPVSASWAFFTFSPKAMSELKDAATKTLD--ASTKFVSTDDALSAFIWKSASRVRLERIDG-----SAPT 287 (451)
T ss_dssp -C----------CCEEEEEEEECHHHHHHHHHHHHTTCC--TTCSCCCHHHHHHHHHHHHHHHHHTTTSCT-----TSEE
T ss_pred -CCC-C-C-CCCCCceEEEEEECHHHHHHHHHHHhhhcc--CCCCCccHHHHHHHHHHHHHHHHHhccCCC-----CCce
Confidence 000 0 0 111467899999999999999999987321 114679999999999999999998 3 344 7899
Q ss_pred EEEEEecccCcCCCCCCCCCccccccceeeeeeccccccccccHHHHHHHHHHHHHhhhhhh-hhhhHHHHHHHHH---H
Q 047419 312 IFGFPVDYRSRLNPSAPLNYFGNCVGRVAEFAKASDFMQLEKGFAFAVEKLSDLVKGIDADA-FEGSKEQIAQIMA---K 387 (470)
Q Consensus 312 ~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~~~L~~~A~~ir~av~~~~~~~-~~~~~~~~~~~~~---~ 387 (470)
.+.++||+|+|++ +|.+||||++..+.+.++++||.+ .+|+++|..||+++.+++.++ +++.++|++..++ +
T Consensus 288 ~l~~~vd~R~rl~--lP~~y~GN~~~~~~~~~~~~el~~--~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (451)
T 2rkv_A 288 EFCRAVDARPAMG--VSNNYPGLLQNMTYHNSTIGEIAN--ESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNV 363 (451)
T ss_dssp EEEEEEECHHHHT--CCTTCCSCCEEEEEEEEEHHHHHH--SCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTB
T ss_pred EEEEEecccccCC--CCCCCcccceeeecccCcHHHhcc--chHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCcccc
Confidence 9999999999998 899999999999999999999987 999999999999999998888 9999999987432 1
Q ss_pred --h--hcCccEEEEecCCCCcccccccC--CCccceEEeeeec-CCceEEEeeccCCCCcEEEEEEeCHHHHHHHHH
Q 047419 388 --L--KQGALLLSVAGSTHFDVYGSDFG--WGRPKKVEIMSID-VSGAVSLAESRDGCGGVEVGVVLEKPQMEAFAS 457 (470)
Q Consensus 388 --~--~~~~~~~~~tsw~~~~~y~~DFG--~G~P~~v~~~~~~-~~g~v~i~p~~~g~gg~ev~v~L~~~~m~~l~~ 457 (470)
. .....++.+|||+++++|++||| ||+|.+++.+... .+|.++++|+. ++||++|.|||++++|++|++
T Consensus 364 ~~~~~~~~~~~~~~ssw~~~~~y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~-~~ggi~v~v~L~~~~m~~f~~ 439 (451)
T 2rkv_A 364 SLTADADPSTSVMLSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKK-PDGEFCAALSLRDEDMDRLKA 439 (451)
T ss_dssp CTTTTCCTTTCEEEEECTTCCGGGCCTTCSSCSCSEEECCBCSCCTTEEEECCCC-TTSCEEEEEEEEHHHHHHHHH
T ss_pred ccccccCCCCCEEEeccccCCccccccCCCCCCceEEEcCCccCCCCEEEEecCC-CCCCEEEEEEeCHHHHHHHhc
Confidence 1 11125699999999999999998 8999999865433 57999999854 478999999999999999987
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.92 E-value=3.2e-07 Score=92.76 Aligned_cols=298 Identities=13% Similarity=0.107 Sum_probs=157.9
Q ss_pred CCceeeccccccccc-CCCcceEEEEeecCCCCCCchhhhHHHHHHHHHHHHhhhccCCCceEeecCCCCCCCCCcEEEe
Q 047419 24 QELTLPLTYFDILWL-KFPPVERIFFYEITGLASDFFNSEIVPRLKHSLSLTLLHYLPLAGSIVWRPQAQDQQQQPVIYY 102 (470)
Q Consensus 24 ~~~~~~LS~lD~~~~-~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~~g~~~i~~ 102 (470)
....++||++.+.+. ..+.+.. .|+... .. ..+.|++++.+++..+|.|--++....+ +.+.+..
T Consensus 4 ~~~~~pls~~Q~~~~~~~y~~~~--~~~l~g-~l------d~~~l~~A~~~lv~rh~~LRt~f~~~~~-----~~~q~v~ 69 (422)
T 1q9j_A 4 GSVIRKLSHSEEVFAQYEVFTSM--TIQLRG-VI------DVDALSDAFDALLETHPVLASHLEQSSD-----GGWNLVA 69 (422)
T ss_dssp TSEEEECCHHHHHHHHTTCEEEE--EEEEES-CC------CHHHHHHHHHHHHHHCGGGSEEEEECTT-----SSEEEEE
T ss_pred CceeecCCHHHHHHHhcCceEEE--EEEEec-CC------CHHHHHHHHHHHHHhCccceEEEEecCC-----cceeeec
Confidence 456889999987432 2222333 344432 22 2789999999999999999999986543 3333222
Q ss_pred cCCCCCCCeEEEEEEecCCCcccccCCCCCCCCccCCCcccceeeeeC-CCcEEEEeeceeeccchhhHHHHHHHHHHHH
Q 047419 103 SPDDDDYGVSVTVAVSCNNDFSHLSGNGIRGDVEFHPLVPHCCLTLFP-DRGFSIGVSSHHAILDGKSTTMFVKSWAYLC 181 (470)
Q Consensus 103 ~~~~~~~gv~~~~a~~~~~~~~~l~~~~p~~~~~~~~l~P~vQvt~f~-~GG~~L~~~~~H~v~Dg~g~~~fl~~wa~~~ 181 (470)
. ....+.+.++... ....-..+.. . ...+..--|.++++.++ .++..|.+.+||.++||.|+..|++.|.+.+
T Consensus 70 ~-~~~~~~~~~~d~~-~~~~~~~~~~-~---~~~~d~~~pl~r~~l~~~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y 143 (422)
T 1q9j_A 70 D-DLLHSGICVIDGT-AATNGSPSGN-A---ELRLDQSVSLLHLQLILREGGAELTLYLHHCMADGHHGAVLVDELFSRY 143 (422)
T ss_dssp C-CSSSCCCEEEC--------------C---CCCCCTTTCSEEEEEECCSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHH
T ss_pred c-CCCCCceEEEECC-CCCcchhhhc-c---cCccCCCCCcEEEEEEecCCCeEEEEEeceEEEchhhHHHHHHHHHHHH
Confidence 2 2200012222111 1011111110 0 01111113446666664 5779999999999999999999999999999
Q ss_pred hhhhccccCCCcccCCCCCCCcccc--cc------cccC-CcchhhhhhhccccCCCCCCCCcccCCC-CcCCcCCceEE
Q 047419 182 KQLAELEQEPSNVNVLPELLTPVFD--RT------LIKD-PKGLYMRYFNMWFSSDPNSKPSLKVLPP-VSVDFNKLVRA 251 (470)
Q Consensus 182 r~~~~~~~~~~~~~~~~~~~~P~~d--r~------~l~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 251 (470)
++....+ .+. .++ ..++.+ .. .... ..... ....+|+...... ...++.. +..........
T Consensus 144 ~~~~~~~-~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~W~~~l~~--~~~lp~~~~~~~~~~~~~~ 214 (422)
T 1q9j_A 144 TDAVTTG-DPG---PIT--PQPTPLSMEAVLAQRGIRKQGLSGAE-RFMSVMYAYEIPA--TETPAVLAHPGLPQAVPVT 214 (422)
T ss_dssp HHHHHSS-SCC---CCC--CCCCCBCHHHHHHHSSCCC-----CT-TSSTTTTCC---------------CCSBCCCCEE
T ss_pred HHhhccC-CCC---CCC--CCCCCCCHHHHHHhcCCcccccchhh-hhhhhhhcccCCC--cccCCCCCCCCCCCCccce
Confidence 8521100 000 011 112111 00 0000 00010 0012343211110 0111100 00011234567
Q ss_pred EEEeCHHHHHHHHHHHhccccccccCCccchhhHHHHHHHHHhhhcccchhhhhhcCCeEEEEEEecccCcCCCCCCCCC
Q 047419 252 SFVLTREDIKKLRDSINDLNDSKQKQLHLSTYVLTLAYAYVCIVNAKREEEAAAAANRDVIFGFPVDYRSRLNPSAPLNY 331 (470)
Q Consensus 252 ~f~f~~~~i~~Lk~~~~~~~~~~~~~~~~St~d~l~AllW~~i~rAr~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y 331 (470)
.+.++++..++||+.|.. ..+|.+.++.|.+-..+.|-+. .. .....+.++++.|....|+++..=
T Consensus 215 ~~~l~~~~~~~l~~~a~~--------~~~t~~~~l~aa~~~~l~r~~~-~~-----~~~v~~g~~~~~R~~~~~~~~~~~ 280 (422)
T 1q9j_A 215 RLWLSKQQTSDLMAFGRE--------HRLSLNAVVAAAILLTEWQLRN-TP-----HVPIPYVYPVDLRFVLAPPVAPTE 280 (422)
T ss_dssp EECCCHHHHHHHHHHHTT--------TTCCHHHHHHHHHHHHHHHHHT-CS-----SCCEEEEEEEETTTTSSSCCCTTT
T ss_pred EEEeCHHHHHHHHHHHHH--------hCCCHHHHHHHHHHHHHHhccc-CC-----CceEEEeeeeecccccCCCCChhh
Confidence 889999999999999887 3489999999987666665421 12 567889999999998766554222
Q ss_pred ccccccceeeeeeccccccccccHHHHHHHHHHHHHh
Q 047419 332 FGNCVGRVAEFAKASDFMQLEKGFAFAVEKLSDLVKG 368 (470)
Q Consensus 332 ~GN~~~~~~~~~~~~~l~~~~~~L~~~A~~ir~av~~ 368 (470)
+.|.+.+....+++.. +.++.+++..+++.+..
T Consensus 281 ~~~~vG~f~n~lp~~~----~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 281 ATNLLGAASYLAEIGP----NTDIVDLASDIVATLRA 313 (422)
T ss_dssp BSCCEEEEEEEECCCS----SCCHHHHHHHHHHHHHH
T ss_pred hhhhheeeeeeeeccC----CCCHHHHHHHHHHHHHH
Confidence 3444444433443321 24567777777777655
No 7
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.37 E-value=0.0001 Score=74.61 Aligned_cols=255 Identities=11% Similarity=0.071 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHhhhccCCCceEeecCCCCCCCCCcEEEecCCCCCCCeEEEEEEecCCC-----cccccC---CCCCCCC
Q 047419 64 VPRLKHSLSLTLLHYLPLAGSIVWRPQAQDQQQQPVIYYSPDDDDYGVSVTVAVSCNND-----FSHLSG---NGIRGDV 135 (470)
Q Consensus 64 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~~g~~~i~~~~~~~~~gv~~~~a~~~~~~-----~~~l~~---~~p~~~~ 135 (470)
.+.|++++.+++..+|.|--++.. . .| .+.- .. .+.+.+.++.+.+ +.++.. ..|-+
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~--~----~~--~v~~--~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~fd-- 99 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSA--Q----GE--LYWH--PF---SPPIDYQDLSIHLEAEPLAWRQIEQDLQRSST-- 99 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECT--T----CC--EEEC--SS---CCCCEEEECTTCTTHHHHHHHHHHHHHTSCCC--
T ss_pred HHHHHHHHHHHHHHhheeEEEEEe--c----CC--eECC--Cc---CCCccEEeCCCCCCHHHHHHHHHHHHhcCCCC--
Confidence 789999999999999999877763 2 14 3332 22 2333333311111 111110 01101
Q ss_pred ccCCCcccceeeeeC--CCcEEEEeeceeeccchhhHHHHHHHHHHHHhhhhccccCCCcccCCCCCCCcccc-----cc
Q 047419 136 EFHPLVPHCCLTLFP--DRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQEPSNVNVLPELLTPVFD-----RT 208 (470)
Q Consensus 136 ~~~~l~P~vQvt~f~--~GG~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~~~~~~~~~~~~~~~~~~~~P~~d-----r~ 208 (470)
+.. -|.++++.++ .+...|.+.+||.++||.|+..|++.+.+.+.+...+ . ..+....++.| +.
T Consensus 100 -l~~-~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g--~-----~~~~~~~~~~~~~~~~~~ 170 (436)
T 1l5a_A 100 -LID-APITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSG--Q-----TPTAAFKPYQSYLEEEAA 170 (436)
T ss_dssp -CBT-SCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHT--C-----CCCCCCCCHHHHHHHHHH
T ss_pred -cCC-CCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcC--C-----CCCCCccCHHHHHHHHHH
Confidence 111 2446666653 5779999999999999999999999999999862211 0 01110111111 00
Q ss_pred cccCCcc-hhhhhhhccccCCCCCCCCcccCCCCcCCcCCceEEEEEeCHHHHHHHHHHHhccccccccCCccchhhHHH
Q 047419 209 LIKDPKG-LYMRYFNMWFSSDPNSKPSLKVLPPVSVDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQLHLSTYVLTL 287 (470)
Q Consensus 209 ~l~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~~~~~~~~~~~~~~~St~d~l~ 287 (470)
.+..... -...+..++.. ..+. ...++.....+........+.++++..++|++.|.. ..+|.+.++.
T Consensus 171 ~~~~~~~~~~~~~W~~~l~-~~~~--~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~--------~~~t~~~~l~ 239 (436)
T 1l5a_A 171 YLTSHRYWQDKQFWQGYLR-EAPD--LTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANA--------NQIGWPDALV 239 (436)
T ss_dssp HHTSHHHHHHHHHHHHHHH-TSCC--CCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHH--------TTCCHHHHHH
T ss_pred hhccHhHHHHHHHHHHHhc-CCCC--cccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHH--------hCCCHHHHHH
Confidence 1111110 01112111110 0110 111211011111234577899999999999999887 2489999998
Q ss_pred HHHHHHhhhcccchhhhhhcCCeEEEEEEecccCcCCCCCCCCCccccccceeeeeeccccccccccHHHHHHHHHHHHH
Q 047419 288 AYAYVCIVNAKREEEAAAAANRDVIFGFPVDYRSRLNPSAPLNYFGNCVGRVAEFAKASDFMQLEKGFAFAVEKLSDLVK 367 (470)
Q Consensus 288 AllW~~i~rAr~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~~~L~~~A~~ir~av~ 367 (470)
|.+-..+.+-.+ ....+.+++++|..- --.+-+|+.+......+.... +.++.+++..+++.+.
T Consensus 240 aa~~~~L~~~~g---------~dv~ig~~~~~R~~~---~~~~~vG~f~n~lplr~~~~~----~~t~~~~l~~v~~~~~ 303 (436)
T 1l5a_A 240 ALCALYLESAEP---------DAPWLWLPFMNRWGS---VAANVPGLMVNSLPLLRLSAQ----QTSLGNYLKQSGQAIR 303 (436)
T ss_dssp HHHHHHHHHHST---------TCCEEEEEECCCTTS---GGGGSCSCCCEEEEEECCCCT----TCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhC---------CceEEeeecccCCCh---HHhcCcceEEEEEEEEEecCC----CCCHHHHHHHHHHHHH
Confidence 876555555432 367899999999652 224556665554444443322 2568888888888776
Q ss_pred hh
Q 047419 368 GI 369 (470)
Q Consensus 368 ~~ 369 (470)
..
T Consensus 304 ~~ 305 (436)
T 1l5a_A 304 SL 305 (436)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.15 E-value=0.00018 Score=74.76 Aligned_cols=258 Identities=17% Similarity=0.179 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHhhhccCCCceEeecCCCCCCCCCcEEEecCCCCCCCeEEEEEEecCCCcccccCCCCCCCCccCCCccc
Q 047419 64 VPRLKHSLSLTLLHYLPLAGSIVWRPQAQDQQQQPVIYYSPDDDDYGVSVTVAVSCNNDFSHLSGNGIRGDVEFHPLVPH 143 (470)
Q Consensus 64 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~~g~~~i~~~~~~~~~gv~~~~a~~~~~~~~~l~~~~p~~~~~~~~l~P~ 143 (470)
.+.|++++.+++..+|.|--++.... |.+.-...+.. .+.+.+.++.+..+.++....-.+. .+.. -|.
T Consensus 133 ~~~l~~A~~~lv~rh~~LRt~f~~~~------~~~~q~v~~~~---~~~~~~~~~~~~~~~~~~~~~~~~f-dl~~-~pl 201 (520)
T 2jgp_A 133 RTRVEAAFQRLIARHESLRTSFAVVN------GEPVQNIHEDV---PFALAYSEVTEEEARELVSSLVQPF-DLEV-APL 201 (520)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEEEET------TEEEEEECSCC---CCCCEEEECCHHHHHHHHHHTCCCC-CTTS-SCC
T ss_pred HHHHHHHHHHHHHHhHhheeEEEeeC------CEEEEEECCCC---CCceEEEeCCHHHHHHHHHHhcCCC-CCCC-Ccc
Confidence 79999999999999999988887643 44433333222 2223222211111111111000000 1111 244
Q ss_pred ceeeeeC--CCcEEEEeeceeeccchhhHHHHHHHHHHHHhhhhccccCCCcccCCCCCCCcccc-----cccccCCcch
Q 047419 144 CCLTLFP--DRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQEPSNVNVLPELLTPVFD-----RTLIKDPKGL 216 (470)
Q Consensus 144 vQvt~f~--~GG~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~~~~~~~~~~~~~~~~~~~~P~~d-----r~~l~~p~~~ 216 (470)
++++.++ .+...|.+.+||.++||.|+..|++.+.+.+++. . +++...++.| +.... ....
T Consensus 202 ~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~-~----------l~~~~~~~~d~~~~~~~~~~-~~~~ 269 (520)
T 2jgp_A 202 IRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGD-V----------LPELRIQYKDFAVWQQEFSQ-SAAF 269 (520)
T ss_dssp EEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTC-C----------CCCCSCCHHHHHHHHHHHTT-SHHH
T ss_pred eeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccC-C----------CCCCCCCHHHHHHHHHHhhc-Chhh
Confidence 6666654 4678999999999999999999999999999873 2 2211112111 11111 1111
Q ss_pred hhhhhhccccCCCC-CCCCcccCCC---CcCCcCCceEEEEEeCHHHHHHHHHHHhccccccccCCccchhhHHHHHHHH
Q 047419 217 YMRYFNMWFSSDPN-SKPSLKVLPP---VSVDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQLHLSTYVLTLAYAYV 292 (470)
Q Consensus 217 ~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~f~f~~~~i~~Lk~~~~~~~~~~~~~~~~St~d~l~AllW~ 292 (470)
.. ...|+..... .+....++.. +...........+.++.+..++||+.|.. ..+|.+.++.|.+-.
T Consensus 270 ~~--~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~--------~~~T~~~~l~aa~a~ 339 (520)
T 2jgp_A 270 HK--QEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKALTEGLHQLAQA--------TGTTLYMVLLAAYNV 339 (520)
T ss_dssp HH--HHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHHHHHHHHHHHH--------HTCCHHHHHHHHHHH
T ss_pred HH--HHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHHHHHHHHHHHH--------cCCCHHHHHHHHHHH
Confidence 11 1122210110 0001111110 11111234567889999999999999877 247899998887555
Q ss_pred HhhhcccchhhhhhcCCeEEEEEEecccCcCCCCCCCCCccccccceeeeeeccccccccccHHHHHHHHHHHHHhh
Q 047419 293 CIVNAKREEEAAAAANRDVIFGFPVDYRSRLNPSAPLNYFGNCVGRVAEFAKASDFMQLEKGFAFAVEKLSDLVKGI 369 (470)
Q Consensus 293 ~i~rAr~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~~~L~~~A~~ir~av~~~ 369 (470)
.+.+-. . .....+.+++++|..- --++-+|+.+......+..+. +.++.+++..+++.+...
T Consensus 340 ~L~~~~---~-----~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~~----~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 340 LLAKYA---G-----QEDIIVGTPITGRSHA---DLEPIVGMFVNTLAMRNKPQR----EKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp HHHHHH---T-----CSCEEEEEEECCCCSG---GGTTCCSCCCEEEEEEECCCT----TSBHHHHHHHHHHHHHHH
T ss_pred HHHHhc---C-----CCCeEEEeccCCCCch---hhhccEEeeeeeeeEEecCCC----CCCHHHHHHHHHHHHHHH
Confidence 554432 2 5678999999999752 234566766555444443322 256778888888776553
No 9
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.10 E-value=0.0014 Score=66.70 Aligned_cols=301 Identities=12% Similarity=0.030 Sum_probs=159.8
Q ss_pred CCceeecccccccc-----cC-CCcceEEEEeecCCCCCCchhhhHHHHHHHHHHHHhhhccCCCceEeecCCCCCCCCC
Q 047419 24 QELTLPLTYFDILW-----LK-FPPVERIFFYEITGLASDFFNSEIVPRLKHSLSLTLLHYLPLAGSIVWRPQAQDQQQQ 97 (470)
Q Consensus 24 ~~~~~~LS~lD~~~-----~~-~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~~g~ 97 (470)
....++||+..+.+ .. ..|. ..+.|.... .. ..+.|+++|.+++..++.|--++.... |.
T Consensus 14 ~~~~~pls~~Q~~~~~~~~~~~~~y~-~~~~~~l~g-~l------d~~~L~~Al~~lv~rh~~LRt~f~~~~------~~ 79 (466)
T 2xhg_A 14 IAGNVPLTPIQKWFFGKNFTNTGHWN-QSSVLYRPE-GF------DPKVIQSVMDKIIEHHDALRMVYQHEN------GN 79 (466)
T ss_dssp CCEECCCCHHHHHHHHTTCTTTTCBE-EEEEEEETT-CC------CHHHHHHHHHHHHHHSGGGGEEEECGG------GC
T ss_pred cCCCCCCCHHHHHHHhCCCCCcCcce-eEEEEEcCC-CC------CHHHHHHHHHHHHHhChHhheEEecCC------Cc
Confidence 35678888876511 11 1232 334555543 33 379999999999999999988887532 44
Q ss_pred cEEEecCCCCCCCeEEEEEEecC-CCccc----ccCCCCCCCCccCCCcccceeeeeC-CCcEEEEeeceeeccchhhHH
Q 047419 98 PVIYYSPDDDDYGVSVTVAVSCN-NDFSH----LSGNGIRGDVEFHPLVPHCCLTLFP-DRGFSIGVSSHHAILDGKSTT 171 (470)
Q Consensus 98 ~~i~~~~~~~~~gv~~~~a~~~~-~~~~~----l~~~~p~~~~~~~~l~P~vQvt~f~-~GG~~L~~~~~H~v~Dg~g~~ 171 (470)
+.-...+.. ...+.+.+.++.+ .+.++ +....-.. ..+.. -|.+++..++ .++-.|-+.+||.++||.|+.
T Consensus 80 ~~q~v~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-fdl~~-~pl~r~~l~~~~~~~~l~l~~HH~i~Dg~S~~ 156 (466)
T 2xhg_A 80 VVQHNRGLG-GQLYDFFSYNLTAQPDVQQAIEAETQRLHSS-MNLQE-GPLVKVALFQTLHGDHLFLAIHHLVVDGISWR 156 (466)
T ss_dssp CEEEECCSS-SCCCEEEEEECTTCSCHHHHHHHHHHHHHTT-CCTTT-CCCEEEEEEEETTEEEEEEEEEGGGCCHHHHH
T ss_pred eeeeccccc-cccceeEEEecCCcccHHHHHHHHHHHHHhc-cCCCC-CCeEEEEEEEcCCCCEEEEEeeeeeechhhHH
Confidence 443333211 1134454444211 11111 10000000 00111 2445555553 344446799999999999999
Q ss_pred HHHHHHHHHHhhhhccccCCCcccCCCCCCCcccc-----cccccCCcchh--hhhhhccccCCCCCCCCcccCCC---C
Q 047419 172 MFVKSWAYLCKQLAELEQEPSNVNVLPELLTPVFD-----RTLIKDPKGLY--MRYFNMWFSSDPNSKPSLKVLPP---V 241 (470)
Q Consensus 172 ~fl~~wa~~~r~~~~~~~~~~~~~~~~~~~~P~~d-----r~~l~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~ 241 (470)
.|++.+.+.+++...+ ..+ .+++...++.| +..+. ..... ..++.+...+.+. ..++.. +
T Consensus 157 ~l~~el~~~Y~~~~~g-~~~----~l~~~~~~y~~~~~~~~~~~~-~~~~~~~~~~W~~~l~~~~~----~~lp~~~~~~ 226 (466)
T 2xhg_A 157 ILFEDLATGYAQALAG-QAI----SLPEKTDSFQSWSQWLQEYAN-EADLLSEIPYWESLESQAKN----VSLPKDYEVT 226 (466)
T ss_dssp HHHHHHHHHHHHHHTT-CCC----CCCCCCSCHHHHHHHHHHHTT-SHHHHTTHHHHHHHHHHCCC----CCCCCSSCCS
T ss_pred HHHHHHHHHHHHHHcC-CCC----CCCCCCCCHHHHHHHHHHHhc-CccchhhhHHHHHhhccCCc----ccCCcccccc
Confidence 9999999999763221 000 11111111111 01111 11111 1111111100010 011110 1
Q ss_pred cCCcCCceEEEEEeCHHHHHHHHHHHhccccccccCCccchhhHHHHHHHHHhhhcccchhhhhhcCCeEEEEEEecccC
Q 047419 242 SVDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQLHLSTYVLTLAYAYVCIVNAKREEEAAAAANRDVIFGFPVDYRS 321 (470)
Q Consensus 242 ~~~~~~~~~~~f~f~~~~i~~Lk~~~~~~~~~~~~~~~~St~d~l~AllW~~i~rAr~~~~~~~~~~~~~~l~~~vd~R~ 321 (470)
...........+.++++..++|++.|.. ...+|.++++.|.+-..+.+-.. .....+.+++++|.
T Consensus 227 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~-------~~~~t~~~~llaa~~~~l~~~~~--------~~dv~ig~~~~gR~ 291 (466)
T 2xhg_A 227 DCKQKSVRNMRIRLHPEETEQLLKHANQ-------AYQTEINDLLLAALGLAFAEWSK--------LAQIVIHLEGHGRE 291 (466)
T ss_dssp SCBGGGEEEEEEECCHHHHHHHHHTGGG-------TTTCCHHHHHHHHHHHHHHHHHC--------CSEEEEEEEECCCC
T ss_pred ccccccceEEEEEcCHHHHHHHHHHhHH-------hhCCCHHHHHHHHHHHHHHHHhC--------CCceEEEecCCCCC
Confidence 1111234567899999999999987754 13478899988876655554422 56789999999997
Q ss_pred cCCC-CCCCCCccccccceeeeeeccccccccccHHHHHHHHHHHHHhhh
Q 047419 322 RLNP-SAPLNYFGNCVGRVAEFAKASDFMQLEKGFAFAVEKLSDLVKGID 370 (470)
Q Consensus 322 rl~p-plp~~Y~GN~~~~~~~~~~~~~l~~~~~~L~~~A~~ir~av~~~~ 370 (470)
...+ +--.+-+|+.+......+.++. ..++.+++..|++.+..+.
T Consensus 292 ~~~~~~~~~~~vG~f~n~lplr~~~~~----~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 292 DIIEQANVARTVGWFTSQYPVLLDLKQ----TAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp SCSTTCCCTTCCSCCCEEEEEEEECSC----CCSHHHHHHHHHHHHHHSG
T ss_pred ccccCCCccccccceeeeccEEEecCC----CCCHHHHHHHHHHHHHhCc
Confidence 6421 1234566666555444443332 2568888899998887663
No 10
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.02 E-value=0.00011 Score=75.87 Aligned_cols=289 Identities=12% Similarity=-0.005 Sum_probs=153.4
Q ss_pred CCceeecccccccc-------cCCCcceEEEEeecCCCCCCchhhhHHHHHHHHHHHHhhhccCCCceEeecCCCCCCCC
Q 047419 24 QELTLPLTYFDILW-------LKFPPVERIFFYEITGLASDFFNSEIVPRLKHSLSLTLLHYLPLAGSIVWRPQAQDQQQ 96 (470)
Q Consensus 24 ~~~~~~LS~lD~~~-------~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~~g 96 (470)
....++||+.-+.+ +...| ...+.|+.+. .. ..+.|++++.+++..+|.|--++.... |
T Consensus 10 ~~~~~Pls~~Q~~~~~~~~~~~~~~y-~~~~~~~l~g-~l------d~~~L~~A~~~lv~rh~~LRt~f~~~~------~ 75 (493)
T 4hvm_A 10 RPGLRRASFLQRGAWRWLREAPPAAA-FAARGLLGSG-RI------DDDRLAAAADEVLDAFPLLRVNFVDDD------G 75 (493)
T ss_dssp --CEEECCHHHHHHHHHHTTSCGGGG-EEEEEEEEES-SC------CHHHHHHHHHHHHHHCGGGGEEEEESS------S
T ss_pred CCCCCCCCHHHHHHHHHHhhCCCCcc-eeEEEEEEeC-CC------CHHHHHHHHHHHHHhchhceeEEEccC------C
Confidence 46788888876421 11111 2334455443 22 379999999999999999988887643 5
Q ss_pred CcEEEecCCCCCCCeEEEEEEecCCC-----cccccC---CCCCCCCccCCCcccceeeeeC--CCcEEEEeeceeeccc
Q 047419 97 QPVIYYSPDDDDYGVSVTVAVSCNND-----FSHLSG---NGIRGDVEFHPLVPHCCLTLFP--DRGFSIGVSSHHAILD 166 (470)
Q Consensus 97 ~~~i~~~~~~~~~gv~~~~a~~~~~~-----~~~l~~---~~p~~~~~~~~l~P~vQvt~f~--~GG~~L~~~~~H~v~D 166 (470)
++. .+. .. .+.+.+.++.+.+ +.++.. ..|- .+.. -|.++++.++ .+...|.+.+||+++|
T Consensus 76 ~~~-~v~-~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~f---dl~~-~pl~r~~l~~~~~~~~~l~l~~HH~i~D 146 (493)
T 4hvm_A 76 LWM-RTR-EN---ADALVRSDLRGHPDPQARCVELLRADRDRPT---DPER-DPLVRLHLVRLSETDVVLGVVAHQMLLD 146 (493)
T ss_dssp EEE-EEC-SC---CCCEEEEECTTSSSHHHHHHHHHHHHHSSCC---CTTT-SCSEEEEEEECSSSEEEEEEEEETTTCC
T ss_pred EEE-Eec-CC---CCCceEEECCCCCchHHHHHHHHHHHhcCCC---CCCC-CCeEEEEEEEECCCcEEEEEecchhhcc
Confidence 555 444 23 2334443321111 111111 0110 1111 2446666664 4568999999999999
Q ss_pred hhhHHHHHHHHHHHHhhhhccccCCCcccCCCCCCCcccc-----cc--cccCCcchhhhhhhccccCCCC-CCCCcccC
Q 047419 167 GKSTTMFVKSWAYLCKQLAELEQEPSNVNVLPELLTPVFD-----RT--LIKDPKGLYMRYFNMWFSSDPN-SKPSLKVL 238 (470)
Q Consensus 167 g~g~~~fl~~wa~~~r~~~~~~~~~~~~~~~~~~~~P~~d-----r~--~l~~p~~~~~~~~~~~~~~~~~-~~~~~~~~ 238 (470)
|.|+..|++.+.+.+.| .. .+ .++.| +. .+..+ ... ...+|+..... .+. + .
T Consensus 147 g~S~~~l~~~l~~~Y~g-~~----------~~---~~~~~~~~~~~~~~~~~~~-~~~--~~~~~W~~~l~~~~~-l--~ 206 (493)
T 4hvm_A 147 ARSRYMVLGAVWQAYYG-RF----------RP---AQYRDFAEVADFHPLDRET-VRV--ARHRWWSRRLPALPV-R--G 206 (493)
T ss_dssp HHHHHHHHHHHHHHHTT-CC----------CG---GGSBCGGGTTTCCTTCSHH-HHH--HHHHHHHHHGGGSCC-C--C
T ss_pred HHHHHHHHHHHHHHhCC-CC----------CC---cCHHHHHHHHhhhhcccCh-hhH--HHHHHHHHhccCCCC-C--C
Confidence 99999999999999965 32 11 11111 11 11111 111 01122210110 001 1 1
Q ss_pred CCCcCCcCCceEEEEEeCHHHHHHHHHHHhccccccccCCccc--hhhHHHHHHHHHhhhcccch---hhhhhcCCeEEE
Q 047419 239 PPVSVDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQLHLS--TYVLTLAYAYVCIVNAKREE---EAAAAANRDVIF 313 (470)
Q Consensus 239 ~~~~~~~~~~~~~~f~f~~~~i~~Lk~~~~~~~~~~~~~~~~S--t~d~l~AllW~~i~rAr~~~---~~~~~~~~~~~l 313 (470)
. ...+........+.++.+..++|++.|.. ..+| .+.++.|.+-..+.+-+... ...........+
T Consensus 207 ~-~~~~~~~~~~~~~~l~~~~~~~l~~~a~~--------~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~ 277 (493)
T 4hvm_A 207 G-DGGPVGPPETSRLRVPGSRWQALTEPGGP--------LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYL 277 (493)
T ss_dssp --------CCEEEEEEEEHHHHHHHHCC--------------CHHHHHHHHHHHHHHHC----------------CEEEE
T ss_pred C-CCCCCCCCeeEEEEcCHHHHHHHHHHHHH--------cCCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEE
Confidence 1 11111226678899999999999988776 3478 99999988666665541100 000002567899
Q ss_pred EEEecccCcCCCCCCCCCccccccceeeeeeccccccccccHHHHHHHHHHHHHhh
Q 047419 314 GFPVDYRSRLNPSAPLNYFGNCVGRVAEFAKASDFMQLEKGFAFAVEKLSDLVKGI 369 (470)
Q Consensus 314 ~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~~~L~~~A~~ir~av~~~ 369 (470)
.+++++|..- --.+.+|+++......+..+.... .++.+++..+++.+...
T Consensus 278 g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~~~~~--~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 278 STEVDLRDHL---QLGSVVGPLTDRVVFGVDLTGLRE--PSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp EEEEEHHHHT---TCCSBCSCCEEEEEEEEECTTCSS--CBHHHHHHHHHHHHHHH
T ss_pred EeeccCCCCc---chhcCeEeeeceeEEEEecCCCcC--CCHHHHHHHHHHHHHHH
Confidence 9999999662 335667777665555554443212 56788888888776653
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=97.82 E-value=0.00085 Score=77.71 Aligned_cols=269 Identities=15% Similarity=0.146 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHhhhccCCCceEeecCCCCCCCCCcEEEecCCCCCCCeEEEEEEecCCC-------cccccCCCCCCCCc
Q 047419 64 VPRLKHSLSLTLLHYLPLAGSIVWRPQAQDQQQQPVIYYSPDDDDYGVSVTVAVSCNND-------FSHLSGNGIRGDVE 136 (470)
Q Consensus 64 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~~g~~~i~~~~~~~~~gv~~~~a~~~~~~-------~~~l~~~~p~~~~~ 136 (470)
++.|++++.+++..++.|--++..... ++..-.+.+.. .+.+.+.++.+.+ +.++....-.....
T Consensus 49 ~~~l~~A~~~lv~rH~~LRt~f~~~~~-----~~p~Q~v~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~fd 120 (1304)
T 2vsq_A 49 IKCLEESMNVIMDRYDVFRTVFIHEKV-----KRPVQVVLKKR---QFHIEEIDLTHLTGSEQTAKINEYKEQDKIRGFD 120 (1304)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEECSSC-----SSCEEEEESCC---CCCEEEEECTTSCHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEcCC-----CeEEEEECCCC---CCceEEEECCCCCchhHHHHHHHHHHHHhcCCCC
Confidence 799999999999999999888875433 33322222222 3344443321111 11111100000000
Q ss_pred cCCCcccceeeee--CCCcEEEEeeceeeccchhhHHHHHHHHHHHHhhhhccccCCCcccCCCCCCCcccccc-cccCC
Q 047419 137 FHPLVPHCCLTLF--PDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQEPSNVNVLPELLTPVFDRT-LIKDP 213 (470)
Q Consensus 137 ~~~l~P~vQvt~f--~~GG~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~~~~~~~~~~~~~~~~~~~~P~~dr~-~l~~p 213 (470)
+.. -|.++++.+ ..+...|-+.+||.++||.|+..|++.+.+.+++...+. .+ .+++ ..++.|-. .+...
T Consensus 121 l~~-~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~-~~----~l~~-~~~y~d~~~~~~~~ 193 (1304)
T 2vsq_A 121 LTR-DIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQK-PY----SLPP-VKPYKDYIKWLEKQ 193 (1304)
T ss_dssp TTT-SCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTC-CC----CCCC-CCCTHHHHHHHHTS
T ss_pred CCC-CCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCC-CC----CCCC-cccHHHHHHHHhcc
Confidence 111 133555554 357789999999999999999999999999998632210 00 1221 11221100 00111
Q ss_pred cc-hhhhhhhccccCCCCCCCCcccCCCCcCCcCCceEEEEEeCHHHHHHHHHHHhccccccccCCccchhhHHHHHHHH
Q 047419 214 KG-LYMRYFNMWFSSDPNSKPSLKVLPPVSVDFNKLVRASFVLTREDIKKLRDSINDLNDSKQKQLHLSTYVLTLAYAYV 292 (470)
Q Consensus 214 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~~~~~~~~~~~~~~~St~d~l~AllW~ 292 (470)
.. -...++.++.. ..+.+..+...+.+...........|.++++..++||+.|.. ..+|.+.++.|.+-.
T Consensus 194 ~~~~~~~yW~~~L~-~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~--------~~~T~~~vllaa~a~ 264 (1304)
T 2vsq_A 194 DKQASLRYWREYLE-GFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKS--------QHTTLSTALQAVWSV 264 (1304)
T ss_dssp CHHHHHHHHHHHHT-TCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHH--------TTCCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhC-CCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHH--------cCCCHHHHHHHHHHH
Confidence 10 11112211110 111111111111011111234567788999999999999987 247889888886544
Q ss_pred HhhhcccchhhhhhcCCeEEEEEEecccCcCCCCCCCCCccccccceeeeeeccccccccccHHHHHHHHHHHHHhh
Q 047419 293 CIVNAKREEEAAAAANRDVIFGFPVDYRSRLNPSAPLNYFGNCVGRVAEFAKASDFMQLEKGFAFAVEKLSDLVKGI 369 (470)
Q Consensus 293 ~i~rAr~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~~~L~~~A~~ir~av~~~ 369 (470)
.+.|-- . .....+..+++.|..-.+.+ ++-+|+.+......+.++. +.++.++...+++.....
T Consensus 265 ~L~r~t---g-----~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~~----~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 265 LISRYQ---Q-----SGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLSE----GITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp HHHHHH---T-----CSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECCT----TCBHHHHHHHHHHHHHHH
T ss_pred HHHHhc---C-----CCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCCC----CCcHHHHHHHHHHHHHHh
Confidence 444332 2 56789999999997532222 3455555544443443322 256888888888876653
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.73 E-value=0.0013 Score=68.37 Aligned_cols=378 Identities=12% Similarity=0.082 Sum_probs=185.6
Q ss_pred hhHHHHHHHHHHHHhhhccCCCceEeecCCCCCCCCCcEEEecCCCCCC------CeEEEEEEecCCCcccc--------
Q 047419 61 SEIVPRLKHSLSLTLLHYLPLAGSIVWRPQAQDQQQQPVIYYSPDDDDY------GVSVTVAVSCNNDFSHL-------- 126 (470)
Q Consensus 61 ~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~~g~~~i~~~~~~~~~------gv~~~~a~~~~~~~~~l-------- 126 (470)
++..+.||.+.-.+=-++|-+|+++..+.. +.....+..-.+.. .--|++.+ .+.+-+|+
T Consensus 72 ~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~-----~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~-~~~t~~e~~~~~~~~r 145 (519)
T 3fot_A 72 QNLKEMFELALLDARFEHPECACTVSWDDE-----VPAIITYESPESNESARDWARGCIHVQP-TAKSALDLWSEMEEGR 145 (519)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGCEEECCSS-----SSCEEEEECCSSHHHHHHHHHHHEEEEE-CSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCcceeEEeeCCC-----CcccEEEecCCCHHHHHHHHHhcEEEeC-CCCCHHHHHHhhhhhh
Confidence 567888999998888889999999997732 44444443211000 01244434 44555554
Q ss_pred --cCCCCCC-CCccCCCccc-ceeeeeCCC--cEEEEeeceeeccchhhHHHHHHHHHHHHhhhhccc--cCCCcccCCC
Q 047419 127 --SGNGIRG-DVEFHPLVPH-CCLTLFPDR--GFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELE--QEPSNVNVLP 198 (470)
Q Consensus 127 --~~~~p~~-~~~~~~l~P~-vQvt~f~~G--G~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~~~~~~--~~~~~~~~~~ 198 (470)
....|+. ...+.-+.|. .+=..+ .+ -.-|.+.+||.++||.|...|++.+-+......... .+.+ .+.
T Consensus 146 ~~~~~~~p~~~~~l~~v~~~~~~~~~~-p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~---~~~ 221 (519)
T 3fot_A 146 AAANDNTPSKSIELFLLSDVSTDSTPI-PQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMK---KIQ 221 (519)
T ss_dssp HHTC-CCCCCSCEEEEEESSSSTTSCC-CTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSC---CCC
T ss_pred cccccCCCccceEEEEEeccccccccC-CCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCC---cCC
Confidence 1111111 1111000010 000003 34 578889999999999999999999888776311000 0000 010
Q ss_pred -----CCCCc-ccccccccCCc-----chhhhhhhccccCCC-CCCCCcccCCCCcCCcCCceEEEEEeCHHHHHHHHHH
Q 047419 199 -----ELLTP-VFDRTLIKDPK-----GLYMRYFNMWFSSDP-NSKPSLKVLPPVSVDFNKLVRASFVLTREDIKKLRDS 266 (470)
Q Consensus 199 -----~~~~P-~~dr~~l~~p~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~ 266 (470)
..+.| ..+ .+..|. .... ...+|.. .. .......++. ...+ .......+.|++++.++|++.
T Consensus 222 ~g~E~~~L~P~~e~--~~~~p~~~~~~e~~~-~~~~~~~-~~~~~~~~~~~P~-~~~~-~~~~~~~~~ls~~~t~~L~~~ 295 (519)
T 3fot_A 222 WGQEIKNLSPPVVD--SLKLDINTLGSEFDD-KCTEYTS-ALVANYKSRGMKF-QPGL-ALPRCVIHKLSADESIDIVKA 295 (519)
T ss_dssp TTTTGGGSCCCTGG--GBSSCGGGCCHHHHH-HHHHHHH-HHHHHHHSCCSBC-CCCC-CCEEEEEEECCHHHHHHHHHH
T ss_pred CCcccccCCcCHHH--HhCCCCCCCCHHHHH-HHHHHHH-HhhcCCCcccCCC-CCCC-CCcceEEEEcCHHHHHHHHHH
Confidence 01111 111 111110 0110 0111110 00 0000111211 1111 223357889999999999999
Q ss_pred HhccccccccCCccchhhHHHHHHHHHhhhcccchhhhhhcCCeEEEEEEecccCcCCCCCCCCCccccccceeeeeec-
Q 047419 267 INDLNDSKQKQLHLSTYVLTLAYAYVCIVNAKREEEAAAAANRDVIFGFPVDYRSRLNPSAPLNYFGNCVGRVAEFAKA- 345 (470)
Q Consensus 267 ~~~~~~~~~~~~~~St~d~l~AllW~~i~rAr~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~- 345 (470)
|... .++.+|-+.+|.|.+-.++.+....... .......+..+||+|+++.++.-.+|||.+..........
T Consensus 296 ck~~-----~~~g~Tvt~~l~Aa~~~al~~~~~~~~~--~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v~~i 368 (519)
T 3fot_A 296 VKTR-----LGPGFTISHLTQAAIVLALLDHLKPNDL--SDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVRIENL 368 (519)
T ss_dssp HHHH-----TCTTCCHHHHHHHHHHHHHHHHC----C--CTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEEECCG
T ss_pred HHhc-----CCCCeeHHHHHHHHHHHHHHhhcCCccc--CCCccEEEEeeeeccccCCCcccccccceeeeeeeeEecCc
Confidence 9982 2456899999977776666553221000 0134688999999999998766567888887765544321
Q ss_pred cc---------cccccccHHHHHHHHHHHHHhh-hhhhhhhhHHHHHH-HHHHh------hcCccEEEEecCCCCcc-cc
Q 047419 346 SD---------FMQLEKGFAFAVEKLSDLVKGI-DADAFEGSKEQIAQ-IMAKL------KQGALLLSVAGSTHFDV-YG 407 (470)
Q Consensus 346 ~~---------l~~~~~~L~~~A~~ir~av~~~-~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~tsw~~~~~-y~ 407 (470)
.. +.. +..+.+++..+++..... ++.+++.+.-++.. ...+. +.+.....+||.-...- -.
T Consensus 369 ~~~~~~~~~~e~~~-~~~~~~~ar~l~~~y~~~~~np~i~~l~~~~k~~~~~l~~~~~~~~~~~~tp~lSslG~vd~~lp 447 (519)
T 3fot_A 369 KSITVSHKDEKELQ-VRALESACRNIKKSYRQWLENPFLQALGLRVHNFEASYLHAKPIPFEGEANPLFISDGINERFIP 447 (519)
T ss_dssp GGGCCCTTSCHHHH-HHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHCSSCCCSBCCCEEEEEEEGGGTSC
T ss_pred cccccccchhhhhh-HhHHHHHHHHHHHHhhcccCCchHHHhHHHHHHHHHHHhcccCCCCCCccCcccccCCccccccc
Confidence 11 110 001455666666655442 33344433333321 11111 11223456676655541 12
Q ss_pred cccC---CCcc-ceEEeeee--c-CC-ceEEEeeccCCCCcEEEEEE-----eCHHHHHHHHHHHHhccc
Q 047419 408 SDFG---WGRP-KKVEIMSI--D-VS-GAVSLAESRDGCGGVEVGVV-----LEKPQMEAFASLFRDGLD 464 (470)
Q Consensus 408 ~DFG---~G~P-~~v~~~~~--~-~~-g~v~i~p~~~g~gg~ev~v~-----L~~~~m~~l~~~~~~~~~ 464 (470)
-.+| .|.. ..+.-... . .. ...+-+-+.. |-+.+.++ .+++.|+.|.+.+.+.|-
T Consensus 448 ~~y~~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~Tf~--g~L~l~~~yn~a~~~~e~v~~~l~~v~~~L~ 515 (519)
T 3fot_A 448 HEIKQTATGENVLSVESIDFVVNQSLPYLAIRLDSWR--DASTLNIIYNDANYTEAEVQKYLQSIVEFML 515 (519)
T ss_dssp SEEEETTTTEEEEEEEEEEEEECCCSSSCEEEEEEET--TEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred hhhccccCCCCceEEEEEEEEccccCCceEEEEEEEC--CEEEEEEEeccccCCHHHHHHHHHHHHHHHH
Confidence 3444 2322 23322211 1 11 2222223333 45666666 456899999988877653
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=72.14 E-value=2.5 Score=37.99 Aligned_cols=29 Identities=31% Similarity=0.625 Sum_probs=26.4
Q ss_pred EEEEeeceeeccchhhHHHHHHHHHHHHh
Q 047419 154 FSIGVSSHHAILDGKSTTMFVKSWAYLCK 182 (470)
Q Consensus 154 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 182 (470)
+-|++++||.+.||.-+..|++.+.+...
T Consensus 181 m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 181 LPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 68899999999999999999999988764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=70.90 E-value=2.8 Score=37.82 Aligned_cols=28 Identities=25% Similarity=0.514 Sum_probs=25.4
Q ss_pred EEEEeeceeeccchhhHHHHHHHHHHHH
Q 047419 154 FSIGVSSHHAILDGKSTTMFVKSWAYLC 181 (470)
Q Consensus 154 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~ 181 (470)
+-|++++||.+.||.-+..|++.+.+..
T Consensus 189 m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 189 MPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 6889999999999999999999998754
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=70.31 E-value=2.9 Score=37.74 Aligned_cols=30 Identities=20% Similarity=0.491 Sum_probs=27.3
Q ss_pred EEEEeeceeeccchhhHHHHHHHHHHHHhh
Q 047419 154 FSIGVSSHHAILDGKSTTMFVKSWAYLCKQ 183 (470)
Q Consensus 154 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~ 183 (470)
+-|++++||.+.||.-+..|++.+.+....
T Consensus 185 m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 214 (219)
T 1q23_A 185 MPLAIQVHHAVCDGFHVGRMLNELQQYCDE 214 (219)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEchhhChHHHHHHHHHHHHHHhC
Confidence 688999999999999999999999987753
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=67.79 E-value=3.6 Score=37.70 Aligned_cols=30 Identities=17% Similarity=0.404 Sum_probs=27.6
Q ss_pred EEEEeeceeeccchhhHHHHHHHHHHHHhh
Q 047419 154 FSIGVSSHHAILDGKSTTMFVKSWAYLCKQ 183 (470)
Q Consensus 154 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~ 183 (470)
+-|++++||.+.||.-+..|++.+.+....
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 233 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLEK 233 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999987753
No 17
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=66.12 E-value=3.4 Score=37.44 Aligned_cols=30 Identities=20% Similarity=0.426 Sum_probs=27.3
Q ss_pred EEEEeeceeeccchhhHHHHHHHHHHHHhh
Q 047419 154 FSIGVSSHHAILDGKSTTMFVKSWAYLCKQ 183 (470)
Q Consensus 154 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~ 183 (470)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 558999999999999999999999998764
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=66.05 E-value=4 Score=37.22 Aligned_cols=30 Identities=20% Similarity=0.412 Sum_probs=27.4
Q ss_pred EEEEeeceeeccchhhHHHHHHHHHHHHhh
Q 047419 154 FSIGVSSHHAILDGKSTTMFVKSWAYLCKQ 183 (470)
Q Consensus 154 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~ 183 (470)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 669999999999999999999999987764
No 19
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=66.03 E-value=3.9 Score=37.51 Aligned_cols=30 Identities=17% Similarity=0.347 Sum_probs=27.5
Q ss_pred EEEEeeceeeccchhhHHHHHHHHHHHHhh
Q 047419 154 FSIGVSSHHAILDGKSTTMFVKSWAYLCKQ 183 (470)
Q Consensus 154 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~ 183 (470)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999988764
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=64.26 E-value=4.4 Score=37.62 Aligned_cols=30 Identities=23% Similarity=0.540 Sum_probs=27.3
Q ss_pred EEEEeeceeeccchhhHHHHHHHHHHHHhh
Q 047419 154 FSIGVSSHHAILDGKSTTMFVKSWAYLCKQ 183 (470)
Q Consensus 154 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~ 183 (470)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 579999999999999999999999988764
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=58.60 E-value=6.5 Score=36.36 Aligned_cols=30 Identities=23% Similarity=0.331 Sum_probs=27.6
Q ss_pred EEEEeeceeeccchhhHHHHHHHHHHHHhh
Q 047419 154 FSIGVSSHHAILDGKSTTMFVKSWAYLCKQ 183 (470)
Q Consensus 154 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~ 183 (470)
+-|+++++|-|.||.-+..|++.|.+....
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999998875
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=57.06 E-value=7.2 Score=35.92 Aligned_cols=30 Identities=17% Similarity=0.319 Sum_probs=27.7
Q ss_pred EEEEeeceeeccchhhHHHHHHHHHHHHhh
Q 047419 154 FSIGVSSHHAILDGKSTTMFVKSWAYLCKQ 183 (470)
Q Consensus 154 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~ 183 (470)
+-|+++++|-|.||.-+..|++.|.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999998875
No 23
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=52.51 E-value=11 Score=26.28 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHhhhccCCCceEeecCCCCCCCCCcEEEec
Q 047419 63 IVPRLKHSLSLTLLHYLPLAGSIVWRPQAQDQQQQPVIYYS 103 (470)
Q Consensus 63 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~~g~~~i~~~ 103 (470)
..+.+.++|.+.+.+-..+||.+...-+ .+.++|++.
T Consensus 11 dleafekalkemirqarkfagtvtytld----gndleirit 47 (85)
T 2kl8_A 11 DLEAFEKALKEMIRQARKFAGTVTYTLD----GNDLEIRIT 47 (85)
T ss_dssp SHHHHHHHHHHHHHHHTTTTCEEEEEEC----SSCEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEec----CCeeEEEEe
Confidence 3788899999999999999999998765 256888875
No 24
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=45.31 E-value=22 Score=28.17 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhhccCCCceEeecCCCCCCCCCcEEEec
Q 047419 64 VPRLKHSLSLTLLHYLPLAGSIVWRPQAQDQQQQPVIYYS 103 (470)
Q Consensus 64 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~~g~~~i~~~ 103 (470)
.+.|.++|.+.+.+-..+||.+...-+ .++++|.+.
T Consensus 94 lea~ekalkemirqarkfagtvtytl~----gn~l~i~it 129 (170)
T 4hhu_A 94 LEALEKALKEMIRQARKFAGTVTYTLS----GNRLVIVIT 129 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEC----SSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEEe----CCEEEEEEe
Confidence 788999999999999999999998765 367888875
No 25
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=42.35 E-value=18 Score=19.71 Aligned_cols=20 Identities=0% Similarity=-0.132 Sum_probs=16.3
Q ss_pred CCccchhhHHHHHHHHHhhh
Q 047419 277 QLHLSTYVLTLAYAYVCIVN 296 (470)
Q Consensus 277 ~~~~St~d~l~AllW~~i~r 296 (470)
.+-+++.|-|+-++|+++..
T Consensus 5 psvftsqdylsdhlwralna 24 (26)
T 2xl1_A 5 PSVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred CceeecHHHHHHHHHHHHhc
Confidence 34578899999999998753
No 26
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=42.08 E-value=22 Score=28.17 Aligned_cols=95 Identities=17% Similarity=0.250 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhhhccCCCceEeecCCCCCCCCCcEEEecCCCCCCCeEEEEEEecCCCcccccCCCCCCCCccCCCccc
Q 047419 64 VPRLKHSLSLTLLHYLPLAGSIVWRPQAQDQQQQPVIYYSPDDDDYGVSVTVAVSCNNDFSHLSGNGIRGDVEFHPLVPH 143 (470)
Q Consensus 64 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~~g~~~i~~~~~~~~~gv~~~~a~~~~~~~~~l~~~~p~~~~~~~~l~P~ 143 (470)
.+.|.++|.+.+.+-..+||.+...-+ .++++|.+. ||+=.+ -.+|..+-.+-..+|. + .
T Consensus 13 lea~ekalkemirqarkfagtvtytl~----gn~l~i~it------gvpeqv-------rkelakeaerl~~efn--i-~ 72 (170)
T 4hhu_A 13 LEALEKALKEMIRQARKFAGTVTYTLS----GNRLVIVIT------GVPEQV-------RKELAKEAERLKAEFN--I-N 72 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEE----TTEEEEEEE------SCCHHH-------HHHHHHHHHHHHHHHT--C-E
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEEe----CCEEEEEEe------CCcHHH-------HHHHHHHHHHHHHhcc--e-E
Confidence 688999999999999999999998755 367888875 332111 1112110000000110 0 1
Q ss_pred ceeeeeCCCcEEEEeeceeeccchhhHHHHHHHHHHHHhh
Q 047419 144 CCLTLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQ 183 (470)
Q Consensus 144 vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~ 183 (470)
+|-+.+..|.=+.- .++.|--.-.|-+++-+..|.
T Consensus 73 v~y~imgsgsgvm~-----i~f~gddlea~ekalkemirq 107 (170)
T 4hhu_A 73 VQYQIMGSGSGVMV-----IVFEGDDLEALEKALKEMIRQ 107 (170)
T ss_dssp EEEEEECTTCCEEE-----EEEECSCHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCceEEE-----EEEecCcHHHHHHHHHHHHHH
Confidence 66776743332222 245666777788888888886
No 27
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=37.88 E-value=6.8 Score=39.15 Aligned_cols=30 Identities=17% Similarity=0.332 Sum_probs=0.0
Q ss_pred EEEEeeceeeccchhhHHHHHHHHHHHHhh
Q 047419 154 FSIGVSSHHAILDGKSTTMFVKSWAYLCKQ 183 (470)
Q Consensus 154 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r~ 183 (470)
+-|++++||.|.||.-+..|++.|.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999987764
No 28
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=34.69 E-value=38 Score=22.25 Aligned_cols=22 Identities=23% Similarity=0.285 Sum_probs=19.2
Q ss_pred eEEEEEeCHHHHHHHHHHHhcc
Q 047419 249 VRASFVLTREDIKKLRDSINDL 270 (470)
Q Consensus 249 ~~~~f~f~~~~i~~Lk~~~~~~ 270 (470)
....|+|++++-+.|++.|.+.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE 23 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEE 23 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHT
T ss_pred ceEEEEecHHHHHHHHHHHHHH
Confidence 3568999999999999999883
Done!