Query 047420
Match_columns 105
No_of_seqs 41 out of 43
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 19:14:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047420.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047420hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1mm0a_ g.3.7.4 (A:) Antimicro 34.2 5.5 0.0004 22.1 0.6 23 64-91 5-27 (36)
2 d2cqea2 g.66.1.1 (A:429-457) Z 13.1 26 0.0019 18.4 0.5 7 84-90 13-19 (29)
3 d1d2za_ a.77.1.2 (A:) Pelle de 10.9 48 0.0035 19.6 1.3 29 64-92 25-53 (102)
4 d1icha_ a.77.1.2 (A:) Tumor ne 9.9 45 0.0033 19.0 0.9 29 60-88 9-37 (87)
5 d1fk5a_ a.52.1.1 (A:) Plant no 9.7 72 0.0053 18.9 1.9 41 50-90 24-77 (93)
6 d1j5ja_ g.3.7.2 (A:) Bekm-1 {L 7.6 58 0.0043 17.5 0.7 25 63-89 10-34 (36)
7 d2daha1 a.5.2.1 (A:8-48) Ubiqu 7.5 57 0.0041 17.6 0.6 14 70-83 8-21 (41)
8 d2gf5a1 a.77.1.2 (A:89-191) FA 7.1 1.3E+02 0.0095 17.3 2.3 32 57-88 11-45 (103)
9 d1mida_ a.52.1.1 (A:) Plant no 7.1 1E+02 0.0075 18.1 1.8 44 47-90 19-75 (91)
10 d2al6a2 b.55.1.5 (A:254-363) F 6.9 45 0.0033 21.5 -0.1 10 81-90 88-97 (110)
No 1
>d1mm0a_ g.3.7.4 (A:) Antimicrobial peptide termicin {Termite (Pseudacanthotermes spiniger) [TaxId: 115113]}
Probab=34.24 E-value=5.5 Score=22.08 Aligned_cols=23 Identities=26% Similarity=0.732 Sum_probs=19.8
Q ss_pred hcchhHHhhhCCCCcchhhhhhcccCCC
Q 047420 64 RNCWLAMLTSLGFTVEEGNIVRGYCDAS 91 (105)
Q Consensus 64 ~~CWP~Ml~slGfT~eE~~iLrGyCd~s 91 (105)
+.||..--...|.. +-|.|||+|
T Consensus 5 ~sCWa~Cq~qh~Iy-----FrrA~Cdgs 27 (36)
T d1mm0a_ 5 QSCWATCQAQHSIY-----FRRAFCDRS 27 (36)
T ss_dssp HHHHHHHHHHSCTT-----EEEEEEETT
T ss_pred HHHHHHHHhhccEE-----EEeeeecCC
Confidence 67999988889988 669999985
No 2
>d2cqea2 g.66.1.1 (A:429-457) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.09 E-value=26 Score=18.35 Aligned_cols=7 Identities=29% Similarity=1.198 Sum_probs=5.9
Q ss_pred hhcccCC
Q 047420 84 VRGYCDA 90 (105)
Q Consensus 84 LrGyCd~ 90 (105)
++|||.+
T Consensus 13 vqGyCtr 19 (29)
T d2cqea2 13 ITGFCAR 19 (29)
T ss_dssp TTTCCSC
T ss_pred eeeeecC
Confidence 6899986
No 3
>d1d2za_ a.77.1.2 (A:) Pelle death domain {Drosophila melanogaster [TaxId: 7227]}
Probab=10.85 E-value=48 Score=19.55 Aligned_cols=29 Identities=7% Similarity=0.186 Sum_probs=22.9
Q ss_pred hcchhHHhhhCCCCcchhhhhhcccCCCC
Q 047420 64 RNCWLAMLTSLGFTVEEGNIVRGYCDASS 92 (105)
Q Consensus 64 ~~CWP~Ml~slGfT~eE~~iLrGyCd~sp 92 (105)
.+.|=.+-..+||+.+|-+.++-+.....
T Consensus 25 ~~~Wr~LA~~Lg~~~~~I~~i~~~~~~~~ 53 (102)
T d1d2za_ 25 LDVWQQLATAVKLYPDQVEQISSQKQRGR 53 (102)
T ss_dssp HTCHHHHHHHTTCCHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHhCCCHHHHHHHHhcccCCC
Confidence 35699999999999998887777665543
No 4
>d1icha_ a.77.1.2 (A:) Tumor necrosis factor receptor-1 death domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.89 E-value=45 Score=19.04 Aligned_cols=29 Identities=14% Similarity=0.200 Sum_probs=22.1
Q ss_pred HHhhhcchhHHhhhCCCCcchhhhhhccc
Q 047420 60 DIITRNCWLAMLTSLGFTVEEGNIVRGYC 88 (105)
Q Consensus 60 ~~I~~~CWP~Ml~slGfT~eE~~iLrGyC 88 (105)
..|...-|..+--.|||+..|-+.++--+
T Consensus 9 ~~v~~~~Wk~lar~LGls~~~i~~I~~~~ 37 (87)
T d1icha_ 9 ENVPPLRWKEFVKRLGLSDHEIDRLELQN 37 (87)
T ss_dssp HHSCSTTHHHHHHHHTCCHHHHHHHHHHC
T ss_pred HHCChHHHHHHHHHhCcCHHHHHHHHHHC
Confidence 45566679999999999988877765433
No 5
>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}
Probab=9.73 E-value=72 Score=18.93 Aligned_cols=41 Identities=10% Similarity=0.310 Sum_probs=24.1
Q ss_pred ccChhhhhHHHHhhh--------cc----hhHHhhh-CCCCcchhhhhhcccCC
Q 047420 50 LTNPDCCHTIDIITR--------NC----WLAMLTS-LGFTVEEGNIVRGYCDA 90 (105)
Q Consensus 50 li~~~CC~AI~~I~~--------~C----WP~Ml~s-lGfT~eE~~iLrGyCd~ 90 (105)
.-.+.||.+++.+-. +| --..... .|+-..-+.-|=+-|.-
T Consensus 24 ~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~~~~~in~~ra~~LP~~C~v 77 (93)
T d1fk5a_ 24 GPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGV 77 (93)
T ss_dssp SCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTC
T ss_pred CCCCchhHHHHHHHHHccCCccHHHHHHhhhhcccccCCcCHHHHHhhhHhcCC
Confidence 345789999998753 23 2222222 35566666667777754
No 6
>d1j5ja_ g.3.7.2 (A:) Bekm-1 {Lesser asian scorpion (Buthus eupeus) [TaxId: 34648]}
Probab=7.64 E-value=58 Score=17.53 Aligned_cols=25 Identities=32% Similarity=0.769 Sum_probs=15.1
Q ss_pred hhcchhHHhhhCCCCcchhhhhhcccC
Q 047420 63 TRNCWLAMLTSLGFTVEEGNIVRGYCD 89 (105)
Q Consensus 63 ~~~CWP~Ml~slGfT~eE~~iLrGyCd 89 (105)
..+|||.--.-.|=+ .+.-..|+||
T Consensus 10 s~qc~pvck~~fgk~--ng~c~ng~c~ 34 (36)
T d1j5ja_ 10 SYQCFPVCKSRFGKT--NGRCVNGFCD 34 (36)
T ss_dssp GGGHHHHHHHHTCCS--CEEEETTEEE
T ss_pred ccchhHHHHHHcCCC--CCceeCCeec
Confidence 468999544444444 3456677775
No 7
>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.54 E-value=57 Score=17.57 Aligned_cols=14 Identities=43% Similarity=0.691 Sum_probs=10.8
Q ss_pred HhhhCCCCcchhhh
Q 047420 70 MLTSLGFTVEEGNI 83 (105)
Q Consensus 70 Ml~slGfT~eE~~i 83 (105)
-+-..||+.+|.++
T Consensus 8 ~L~~MGF~d~~~Ni 21 (41)
T d2daha1 8 QLRSMGFLNREANL 21 (41)
T ss_dssp HHHHHTCCCHHHHH
T ss_pred HHHHcCCCCHHHHH
Confidence 45678999998875
No 8
>d2gf5a1 a.77.1.2 (A:89-191) FADD (Mort1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.11 E-value=1.3e+02 Score=17.27 Aligned_cols=32 Identities=13% Similarity=0.272 Sum_probs=22.6
Q ss_pred hHHHHhhhcc---hhHHhhhCCCCcchhhhhhccc
Q 047420 57 HTIDIITRNC---WLAMLTSLGFTVEEGNIVRGYC 88 (105)
Q Consensus 57 ~AI~~I~~~C---WP~Ml~slGfT~eE~~iLrGyC 88 (105)
..+.+|.++- |..+-..|||+..+-+-++--+
T Consensus 11 ~~f~~ia~~lg~~W~~La~~Lgl~~~~I~~I~~~~ 45 (103)
T d2gf5a1 11 AAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRY 45 (103)
T ss_dssp HHHHHHHHSCCTTHHHHHHHTTCCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhHHHHHHHcCCCHHHHHHHHHHc
Confidence 3444444443 9999999999988877776443
No 9
>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=7.07 E-value=1e+02 Score=18.14 Aligned_cols=44 Identities=9% Similarity=0.340 Sum_probs=26.4
Q ss_pred cCCccChhhhhHHHHhhh--------cc----hhHHhhh-CCCCcchhhhhhcccCC
Q 047420 47 SGGLTNPDCCHTIDIITR--------NC----WLAMLTS-LGFTVEEGNIVRGYCDA 90 (105)
Q Consensus 47 ~ggli~~~CC~AI~~I~~--------~C----WP~Ml~s-lGfT~eE~~iLrGyCd~ 90 (105)
+|+...+.||.+++.+-. +| --..... .|+-..-+.-|=+-|.-
T Consensus 19 g~~~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~~~~~in~~ra~~LP~~C~v 75 (91)
T d1mida_ 19 GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNV 75 (91)
T ss_dssp TCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTC
T ss_pred CCCCCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhcccCCCcCHHHHHhchHhcCC
Confidence 455677899999988753 23 2222222 24555666677777754
No 10
>d2al6a2 b.55.1.5 (A:254-363) Focal adhesion kinase 1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=6.88 E-value=45 Score=21.49 Aligned_cols=10 Identities=30% Similarity=1.089 Sum_probs=8.2
Q ss_pred hhhhhcccCC
Q 047420 81 GNIVRGYCDA 90 (105)
Q Consensus 81 ~~iLrGyCd~ 90 (105)
+|++.|||--
T Consensus 88 AdLIdGYCrL 97 (110)
T d2al6a2 88 ADLIDGYCRL 97 (110)
T ss_dssp HHHHHHHHHH
T ss_pred HHHhhheEEE
Confidence 6899999954
Done!