Query 047424
Match_columns 379
No_of_seqs 253 out of 1372
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 10:57:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047424.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047424hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15171 lipopolysaccharide 1, 100.0 3.5E-51 7.6E-56 401.3 21.0 267 67-352 24-291 (334)
2 cd06429 GT8_like_1 GT8_like_1 100.0 1.8E-49 3.8E-54 375.3 21.1 238 69-347 1-256 (257)
3 PLN02718 Probable galacturonos 100.0 5.9E-49 1.3E-53 398.6 19.4 278 62-352 307-594 (603)
4 PLN02523 galacturonosyltransfe 100.0 8.6E-48 1.9E-52 385.9 21.8 278 62-352 242-550 (559)
5 PLN02829 Probable galacturonos 100.0 4.8E-48 1E-52 391.1 18.2 277 63-352 326-630 (639)
6 PLN02742 Probable galacturonos 100.0 1.1E-47 2.4E-52 384.7 20.3 277 62-352 221-526 (534)
7 PLN02910 polygalacturonate 4-a 100.0 1.1E-46 2.4E-51 380.6 18.6 276 63-352 340-648 (657)
8 cd06431 GT8_LARGE_C LARGE cata 100.0 3.9E-46 8.5E-51 357.0 20.0 270 69-362 3-279 (280)
9 PLN02870 Probable galacturonos 100.0 8.3E-45 1.8E-49 363.4 17.8 275 62-352 200-523 (533)
10 COG1442 RfaJ Lipopolysaccharid 100.0 3.7E-44 8E-49 346.8 19.1 265 68-352 2-266 (325)
11 PLN02659 Probable galacturonos 100.0 2.6E-44 5.5E-49 360.0 18.5 278 62-352 201-524 (534)
12 cd00505 Glyco_transf_8 Members 100.0 1.3E-43 2.8E-48 334.2 20.8 241 69-330 1-246 (246)
13 PLN02769 Probable galacturonos 100.0 3.7E-44 7.9E-49 365.2 18.3 271 62-352 324-621 (629)
14 cd04194 GT8_A4GalT_like A4GalT 100.0 1.5E-43 3.2E-48 333.8 17.7 242 69-329 1-247 (248)
15 PLN02867 Probable galacturonos 100.0 1.4E-43 3.1E-48 355.9 17.8 276 62-352 205-526 (535)
16 cd06430 GT8_like_2 GT8_like_2 100.0 9.6E-40 2.1E-44 312.8 20.8 257 69-350 1-276 (304)
17 PF01501 Glyco_transf_8: Glyco 100.0 2E-40 4.3E-45 309.2 13.4 249 70-331 1-249 (250)
18 cd06432 GT8_HUGT1_C_like The C 100.0 2E-37 4.4E-42 292.2 17.7 235 69-323 1-239 (248)
19 cd02537 GT8_Glycogenin Glycoge 100.0 2.2E-30 4.7E-35 243.5 15.5 225 71-347 4-237 (240)
20 PLN00176 galactinol synthase 100.0 8.1E-30 1.8E-34 247.7 18.6 258 68-352 24-296 (333)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.9 9E-24 2E-28 201.1 14.5 215 72-332 5-242 (278)
22 KOG1879 UDP-glucose:glycoprote 99.5 4.1E-13 8.9E-18 144.7 12.9 263 65-350 1178-1446(1470)
23 COG5597 Alpha-N-acetylglucosam 99.0 2.4E-10 5.1E-15 108.0 2.4 171 156-351 155-359 (368)
24 PF11051 Mannosyl_trans3: Mann 96.8 0.0024 5.1E-08 61.3 6.1 107 71-194 4-114 (271)
25 PF03407 Nucleotid_trans: Nucl 96.6 0.012 2.7E-07 53.8 9.1 138 157-323 52-201 (212)
26 PLN03182 xyloglucan 6-xylosylt 95.8 0.021 4.6E-07 57.1 6.6 158 167-352 195-383 (429)
27 PF05637 Glyco_transf_34: gala 93.4 0.049 1.1E-06 51.3 2.4 152 157-323 60-231 (239)
28 PF00535 Glycos_transf_2: Glyc 89.4 4.3 9.4E-05 33.8 10.0 97 73-193 5-102 (169)
29 KOG1950 Glycosyl transferase, 86.2 0.98 2.1E-05 45.3 4.7 166 158-332 114-290 (369)
30 PLN03181 glycosyltransferase; 81.4 5.7 0.00012 40.3 7.6 35 316-352 386-420 (453)
31 cd06423 CESA_like CESA_like is 80.8 17 0.00037 30.0 9.6 92 81-193 10-102 (180)
32 cd06439 CESA_like_1 CESA_like_ 80.1 28 0.00061 31.8 11.6 103 68-193 30-133 (251)
33 KOG1928 Alpha-1,4-N-acetylgluc 77.0 1.3 2.8E-05 44.2 1.5 31 156-191 228-258 (409)
34 cd02520 Glucosylceramide_synth 76.6 24 0.00052 31.2 9.7 105 69-191 3-108 (196)
35 cd02510 pp-GalNAc-T pp-GalNAc- 75.7 21 0.00045 34.1 9.5 103 71-192 2-106 (299)
36 cd04186 GT_2_like_c Subfamily 73.9 34 0.00074 28.4 9.5 88 80-192 9-97 (166)
37 cd00761 Glyco_tranf_GTA_type G 72.8 46 0.001 26.5 10.2 89 80-190 9-97 (156)
38 cd02515 Glyco_transf_6 Glycosy 72.2 38 0.00082 32.5 10.0 198 68-298 35-247 (271)
39 cd06421 CESA_CelA_like CESA_Ce 71.1 32 0.00069 30.8 9.2 100 69-188 3-102 (234)
40 cd04184 GT2_RfbC_Mx_like Myxoc 71.0 44 0.00095 29.1 9.9 102 69-191 3-105 (202)
41 cd04192 GT_2_like_e Subfamily 70.9 29 0.00064 30.8 8.9 96 80-192 9-105 (229)
42 cd04196 GT_2_like_d Subfamily 70.5 57 0.0012 28.5 10.6 92 81-193 11-103 (214)
43 TIGR03111 glyc2_xrt_Gpos1 puta 69.3 38 0.00082 34.6 10.2 103 68-191 50-153 (439)
44 PF03071 GNT-I: GNT-I family; 68.6 28 0.00061 35.7 8.9 117 68-192 94-213 (434)
45 PF04765 DUF616: Protein of un 61.8 8 0.00017 37.8 3.3 47 157-204 140-187 (305)
46 PF07801 DUF1647: Protein of u 61.4 25 0.00054 30.5 5.9 69 65-142 58-126 (142)
47 cd06427 CESA_like_2 CESA_like_ 61.3 50 0.0011 30.2 8.5 51 69-120 3-53 (241)
48 PF03414 Glyco_transf_6: Glyco 61.1 78 0.0017 31.4 9.9 203 68-297 100-311 (337)
49 cd04190 Chitin_synth_C C-termi 61.0 19 0.00041 33.3 5.7 22 171-192 74-96 (244)
50 PF04488 Gly_transf_sug: Glyco 59.9 4.8 0.0001 32.4 1.2 31 156-191 66-97 (103)
51 PRK11204 N-glycosyltransferase 59.8 92 0.002 31.2 10.8 102 68-192 55-157 (420)
52 PF13641 Glyco_tranf_2_3: Glyc 58.6 33 0.00071 30.7 6.7 103 69-191 3-108 (228)
53 cd06434 GT2_HAS Hyaluronan syn 58.5 1.3E+02 0.0029 26.8 10.8 99 69-193 2-101 (235)
54 cd06913 beta3GnTL1_like Beta 1 57.9 92 0.002 27.8 9.6 99 80-193 9-108 (219)
55 COG2943 MdoH Membrane glycosyl 57.4 55 0.0012 34.6 8.5 93 80-187 161-257 (736)
56 cd02514 GT13_GLCNAC-TI GT13_GL 55.5 53 0.0011 32.6 7.9 113 70-191 3-118 (334)
57 PF11735 CAP59_mtransfer: Cryp 54.1 1.1E+02 0.0024 28.8 9.6 110 77-195 12-137 (241)
58 cd02525 Succinoglycan_BP_ExoA 53.8 1.2E+02 0.0026 27.1 9.8 101 70-192 3-104 (249)
59 TIGR03472 HpnI hopanoid biosyn 53.5 87 0.0019 31.1 9.3 104 68-189 42-145 (373)
60 PRK15383 type III secretion sy 53.2 6.9 0.00015 36.8 1.2 23 172-194 220-242 (335)
61 PRK15384 type III secretion sy 53.0 6.6 0.00014 36.9 1.1 23 172-194 217-239 (336)
62 PRK15382 non-LEE encoded effec 52.8 7 0.00015 36.8 1.2 23 172-194 212-234 (326)
63 cd06442 DPM1_like DPM1_like re 52.3 1.7E+02 0.0036 25.8 10.3 92 81-193 10-102 (224)
64 cd06437 CESA_CaSu_A2 Cellulose 51.5 1.3E+02 0.0028 27.1 9.5 101 69-187 3-104 (232)
65 cd04179 DPM_DPG-synthase_like 51.4 1.5E+02 0.0033 25.1 10.0 94 80-193 9-103 (185)
66 cd06435 CESA_NdvC_like NdvC_li 50.4 1.7E+02 0.0036 26.2 10.1 99 71-187 2-101 (236)
67 cd04195 GT2_AmsE_like GT2_AmsE 49.7 1.7E+02 0.0037 25.3 9.7 84 81-187 13-97 (201)
68 PF03314 DUF273: Protein of un 48.7 14 0.00029 34.2 2.4 25 163-188 35-59 (222)
69 TIGR03469 HonB hopene-associat 47.9 2.3E+02 0.0049 28.3 11.3 112 68-192 41-156 (384)
70 PRK05454 glucosyltransferase M 47.5 1.9E+02 0.0042 31.7 11.3 110 68-192 125-243 (691)
71 PF05704 Caps_synth: Capsular 47.1 59 0.0013 31.3 6.7 93 71-192 48-143 (276)
72 cd06433 GT_2_WfgS_like WfgS an 44.8 2E+02 0.0042 24.5 9.4 87 80-191 10-97 (202)
73 PF10111 Glyco_tranf_2_2: Glyc 43.5 1.5E+02 0.0032 28.2 8.8 94 81-192 17-111 (281)
74 cd06420 GT2_Chondriotin_Pol_N 43.0 2.1E+02 0.0045 24.2 10.3 94 80-193 9-103 (182)
75 PRK10018 putative glycosyl tra 41.4 3.2E+02 0.007 26.0 11.6 102 68-192 6-108 (279)
76 PRK14583 hmsR N-glycosyltransf 39.2 2.1E+02 0.0045 29.2 9.7 101 68-191 76-177 (444)
77 cd04191 Glucan_BSP_ModH Glucan 36.7 3.5E+02 0.0076 25.4 10.1 22 171-192 96-118 (254)
78 PRK10073 putative glycosyl tra 36.0 3.6E+02 0.0078 26.3 10.5 102 68-193 7-109 (328)
79 PTZ00260 dolichyl-phosphate be 35.9 4.3E+02 0.0093 25.9 12.4 109 67-193 70-186 (333)
80 cd06438 EpsO_like EpsO protein 34.8 1.6E+02 0.0036 25.3 7.2 37 81-117 10-46 (183)
81 PRK10063 putative glycosyl tra 34.4 3.8E+02 0.0083 24.8 10.5 98 69-189 3-101 (248)
82 PF13896 Glyco_transf_49: Glyc 34.1 1.4E+02 0.0031 29.2 7.2 118 67-191 25-148 (317)
83 PLN02726 dolichyl-phosphate be 33.0 3.8E+02 0.0081 24.3 10.4 107 68-193 10-117 (243)
84 cd02522 GT_2_like_a GT_2_like_ 32.6 2.7E+02 0.006 24.3 8.4 42 71-115 3-44 (221)
85 KOG3737 Predicted polypeptide 31.7 1.8E+02 0.0039 29.7 7.3 99 69-187 157-257 (603)
86 PF03452 Anp1: Anp1; InterPro 31.2 3.9E+02 0.0085 25.7 9.4 113 64-183 22-155 (269)
87 cd06436 GlcNAc-1-P_transferase 27.8 4.1E+02 0.0088 23.1 8.7 35 81-118 10-44 (191)
88 cd04185 GT_2_like_b Subfamily 27.4 3.8E+02 0.0082 23.2 8.3 96 71-188 2-97 (202)
89 PRK14716 bacteriophage N4 adso 25.5 8.1E+02 0.017 25.8 11.4 122 67-202 66-190 (504)
90 cd06422 NTP_transferase_like_1 25.1 1.3E+02 0.0028 27.0 4.9 23 172-194 98-120 (221)
91 PF11397 GlcNAc: Glycosyltrans 22.7 7.7E+02 0.017 24.5 10.3 34 156-190 103-136 (343)
92 TIGR03030 CelA cellulose synth 21.6 5E+02 0.011 28.5 9.3 45 68-112 132-176 (713)
93 KOG4748 Subunit of Golgi manno 21.5 1.2E+02 0.0026 30.5 4.0 174 167-366 173-361 (364)
No 1
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=3.5e-51 Score=401.26 Aligned_cols=267 Identities=18% Similarity=0.300 Sum_probs=207.6
Q ss_pred CceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhh
Q 047424 67 SLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISS 146 (379)
Q Consensus 67 ~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~ 146 (379)
+.||||+++|++|+++++|+|.||++|+++ ..++|||+++++++++++.|+++..+. +.++.++.+|.+.+.+..+
T Consensus 24 ~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~~--~~~i~~~~id~~~~~~~~~- 99 (334)
T PRK15171 24 NSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQY--NTRINIYLINCERLKSLPS- 99 (334)
T ss_pred CceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHhc--CCeEEEEEeCHHHHhCCcc-
Confidence 589999999999999999999999999764 679999999999999999999887553 3477888888777765533
Q ss_pred hhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhh
Q 047424 147 SIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLS 226 (379)
Q Consensus 147 ~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~ 226 (379)
..+++.++|+||++|++||++++||||||+|+||++||++||++|++++.++||+.++... + |.+. ..
T Consensus 100 ---~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~---~-----~~~~-~~ 167 (334)
T PRK15171 100 ---TKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAE---W-----WSKR-AQ 167 (334)
T ss_pred ---cCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchh---H-----HHHH-HH
Confidence 2356789999999999999779999999999999999999999999977888886553211 1 1111 11
Q ss_pred hhcC-CCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCceecccccccccCCCCCcc
Q 047424 227 RVFG-SRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVK 305 (379)
Q Consensus 227 ~~~~-~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~ 305 (379)
+... +....|||||||||||++||++++++++++++........+..+|||+||.+|.|+|+.||++||++........
T Consensus 168 ~l~~~~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~~ 247 (334)
T PRK15171 168 SLQTPGLASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNYELK 247 (334)
T ss_pred hcCCccccccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhHHHH
Confidence 1111 112469999999999999999999999999998643111234479999999999999999999999742111111
Q ss_pred cccccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCCc
Q 047424 306 GSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS 352 (379)
Q Consensus 306 ~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 352 (379)
..+......+++||||+|+.|||+..+ .+|+.++||+|...+|.
T Consensus 248 ~~~~~~~~~~p~IIHy~G~~KPW~~~~---~~~~~~~f~~~~~~spw 291 (334)
T PRK15171 248 DSVINPVNDETVFIHYIGPTKPWHSWA---DYPVSQYFLKAKEASPW 291 (334)
T ss_pred hcccccccCCCEEEEECCCCCCCCCCC---CCchHHHHHHHHhcCCC
Confidence 111111124579999999999998643 35789999999999998
No 2
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=1.8e-49 Score=375.31 Aligned_cols=238 Identities=29% Similarity=0.557 Sum_probs=193.2
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh-
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS- 147 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~- 147 (379)
+|||+++| +|+ ++++++.|++.|++++++++|||++++++.+.++.+.+.. ...+.+++++.++...+.+.....
T Consensus 1 ~hiv~~~D-n~l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~--~~~~~~i~~~~i~~~~~~~~~~~~~ 76 (257)
T cd06429 1 IHVVIFSD-NRL-AAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLN--PLKIATVKVLNFDDFKLLGKVKVDS 76 (257)
T ss_pred CCEEEEec-chh-HHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhc--CCCCceEEEEEeCcHHhhcccccch
Confidence 69999999 899 6788899999999877899999999999976655554432 123678889999866554332110
Q ss_pred ---------------hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcc
Q 047424 148 ---------------IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFT 212 (379)
Q Consensus 148 ---------------i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~ 212 (379)
.+..+.++++|+||++|++||+ ++||||||+|+||++||++||++||+| +++||+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp~-~~kvlYLD~Dviv~~dl~eL~~~dl~~-~~~aav~d------ 148 (257)
T cd06429 77 LMQLESEADTSNLKQRKPEYISLLNFARFYLPELFPK-LEKVIYLDDDVVVQKDLTELWNTDLGG-GVAGAVET------ 148 (257)
T ss_pred hhhhhccccccccccCCccccCHHHHHHHHHHHHhhh-hCeEEEEeCCEEEeCCHHHHhhCCCCC-CEEEEEhh------
Confidence 1335778899999999999996 999999999999999999999999995 46676542
Q ss_pred cccccCCCCChhhhhhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccc--cCCCCCCchHHHHhcccCceec
Q 047424 213 KYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRK--RIYDLGSLPPFLLVFAGNVEAI 290 (379)
Q Consensus 213 ~y~~~~~w~~~~l~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~--~~~~~gdqd~lN~vf~g~i~~L 290 (379)
||||||||||+++||+.++++++++|++.+.+. ..++++|||++|++|.|+++.|
T Consensus 149 -----------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L 205 (257)
T cd06429 149 -----------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPL 205 (257)
T ss_pred -----------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEEC
Confidence 799999999999999999999999999887653 4578899999999999999999
Q ss_pred ccccccccCCCCCcccccccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhccc
Q 047424 291 DHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYD 347 (379)
Q Consensus 291 ~~~wN~~~~~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~ 347 (379)
|++||+++++++.... ... ..+++||||+|+.|||+..+. ++++++||+|.
T Consensus 206 ~~~wN~~~l~~~~~~~--~~~-~~~~~IIHy~G~~KPW~~~~~---~~~~~~w~~yl 256 (257)
T cd06429 206 DPSWHVRGLGYNYGIR--PQD-IKAAAVLHFNGNMKPWLRTAI---PSYKELWEKYL 256 (257)
T ss_pred ChHHcccCCccccccc--ccc-cCCcEEEEECCCCCCcCCCCC---ChHHHHHHHHh
Confidence 9999999776543211 111 235899999999999998642 47999999996
No 3
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=5.9e-49 Score=398.63 Aligned_cols=278 Identities=24% Similarity=0.468 Sum_probs=220.2
Q ss_pred CCCCCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechh-hH
Q 047424 62 SSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFRED-TV 140 (379)
Q Consensus 62 ~~~~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~-~~ 140 (379)
...||+.+|||+++|+ |+ +++|+|.|++.|+..++.++|||++++++.++++.+..+. .. .+.+++++.+|.. .+
T Consensus 307 ~l~d~~~~Hia~~sDN-vl-aasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~-~~-~~a~I~V~~Iddf~~l 382 (603)
T PLN02718 307 RYNDPDLYHYVVFSDN-VL-ACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLN-PP-GKATIQILNIDDMNVL 382 (603)
T ss_pred hccCCcceeEEEEcCC-ce-eEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhC-CC-CCcEEEEEecchhccc
Confidence 3568899999999997 64 9999999999998777899999999999999888776643 21 2467778777631 11
Q ss_pred Hhhhh------hhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccc
Q 047424 141 INLIS------SSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKY 214 (379)
Q Consensus 141 ~~~is------~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y 214 (379)
.+... .+.+..+.++++|+||+||++||+ ++||||||+|+||++||++||++||+ ++++||+++|...+..+
T Consensus 383 p~~~~~~lk~l~s~~~~~~S~~~y~Rl~ipellp~-l~KvLYLD~DvVV~~DL~eL~~iDl~-~~v~aaVedC~~~~~~~ 460 (603)
T PLN02718 383 PADYNSLLMKQNSHDPRYISALNHARFYLPDIFPG-LNKIVLFDHDVVVQRDLSRLWSLDMK-GKVVGAVETCLEGEPSF 460 (603)
T ss_pred cccchhhhhhccccccccccHHHHHHHHHHHHhcc-cCEEEEEECCEEecCCHHHHhcCCCC-CcEEEEeccccccccch
Confidence 11000 011224678899999999999996 99999999999999999999999999 56889999996532111
Q ss_pred c---ccCCCCChhhhhhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCceecc
Q 047424 215 F---TDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAID 291 (379)
Q Consensus 215 ~---~~~~w~~~~l~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i~~L~ 291 (379)
. ....+++|.+.+.+. ++.||||+|||||||++||++++++++.+|++.+.+..+|++|+++++|++|.|+++.||
T Consensus 461 ~~~~~~lnfs~p~i~~~fn-~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD 539 (603)
T PLN02718 461 RSMDTFINFSDPWVAKKFD-PKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALD 539 (603)
T ss_pred hhhhhhhhccchhhhcccC-CCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecC
Confidence 1 111245554444343 468999999999999999999999999999998877778999999999999999999999
Q ss_pred cccccccCCCCCcccccccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCCc
Q 047424 292 HRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS 352 (379)
Q Consensus 292 ~~wN~~~~~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 352 (379)
++||++++|++.....+ . .++++||||+|+.|||...+.. .|+++|.+|..+...
T Consensus 540 ~rWNv~gLG~~~~i~~~-~--i~~aaIIHYnG~~KPWle~~i~---~yr~~W~k~v~~~~~ 594 (603)
T PLN02718 540 KRWHVLGLGHESGVGAS-D--IEQAAVIHYDGVMKPWLDIGIG---KYKRYWNIHVPYHHP 594 (603)
T ss_pred hHHhccCcccccccccc-c--cCCCEEEEECCCCCccccCChh---hHHHHHHhhcCCCCh
Confidence 99999998875432221 1 3468999999999999998653 599999999988763
No 4
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=8.6e-48 Score=385.93 Aligned_cols=278 Identities=26% Similarity=0.529 Sum_probs=217.8
Q ss_pred CCCCCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEech-hhH
Q 047424 62 SSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFRE-DTV 140 (379)
Q Consensus 62 ~~~~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~-~~~ 140 (379)
...||+.+|+|+.+|+ +.+++|+|.|++.|++.|++++|||++++++...++.+... ....+..+++..++. +.+
T Consensus 242 ~l~dp~l~Hy~ifSdN--vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~--n~~~~a~I~V~~Iedf~~l 317 (559)
T PLN02523 242 ELEDPSLYHYAIFSDN--VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKM--RDLNGAHVEVKAVEDYKFL 317 (559)
T ss_pred hccCCCcceEEEecCc--chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhh--CCCCCcEEEEEEeehhhhc
Confidence 3678999999999997 99999999999999999999999999999998766666543 122245666666653 111
Q ss_pred H-------hhhhh-h---------------------h-HhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhH
Q 047424 141 I-------NLISS-S---------------------I-REALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKL 190 (379)
Q Consensus 141 ~-------~~is~-~---------------------i-~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL 190 (379)
. +...+ . . ...+.+.++|+||+||++||+ ++||||||+||||++||++|
T Consensus 318 n~~~~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~-ldKVLYLD~DVVVq~DLseL 396 (559)
T PLN02523 318 NSSYVPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPK-LHRILFLDDDVVVQKDLTGL 396 (559)
T ss_pred ccccchHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhcc-cCeEEEEeCCEEecCCHHHH
Confidence 1 00110 0 0 024567899999999999996 99999999999999999999
Q ss_pred hccCCCCCeeEeeccccccCcccccccCCCCChhhhhhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccC
Q 047424 191 WDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRI 270 (379)
Q Consensus 191 ~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~ 270 (379)
|++||+ ++++||+++|...+.+|.....+++|.+++.|. .+.||||+|||||||++||++++++++..|++.+.+..+
T Consensus 397 w~iDL~-gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yFN-s~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l 474 (559)
T PLN02523 397 WKIDMD-GKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFN-PKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTL 474 (559)
T ss_pred HhCcCC-CceEEEehhhhhHHHHHHHhhcccchhhhhCcC-CCcccccCCcEEEeHHHHHHhchHHHHHHHHHhcccccc
Confidence 999999 568999999864444444333455665554443 468999999999999999999999999888777666678
Q ss_pred CCCCCchHHHHhcccCceecccccccccCCCCCcccccccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccC
Q 047424 271 YDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFK 350 (379)
Q Consensus 271 ~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~ 350 (379)
|++|.++++|++|.|+++.||++||++++|++..... ... .+++||||+|+.|||...+. .+++++|++|..+.
T Consensus 475 ~DqdaLpp~LivF~gri~~LD~rWNvlglGy~~~i~~-~~i--~~paIIHYnG~~KPWle~~i---~~yr~~W~kYl~~~ 548 (559)
T PLN02523 475 WKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISM-DEI--RNAAVIHFNGNMKPWLDIAM---NQFKPLWTKYVDYD 548 (559)
T ss_pred ccccccchHHHHhcCceEecCchhhccCCccCCCccc-ccc--CCCEEEEECCCCCccccCCC---CcchHHHHHHHccC
Confidence 9999999999999999999999999999886432111 122 45899999999999987653 36899999999887
Q ss_pred Cc
Q 047424 351 HS 352 (379)
Q Consensus 351 ~~ 352 (379)
..
T Consensus 549 ~~ 550 (559)
T PLN02523 549 ME 550 (559)
T ss_pred CH
Confidence 64
No 5
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=4.8e-48 Score=391.08 Aligned_cols=277 Identities=26% Similarity=0.509 Sum_probs=220.1
Q ss_pred CCCCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEech-----
Q 047424 63 SCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFRE----- 137 (379)
Q Consensus 63 ~~~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~----- 137 (379)
..||+..|.|+.+|+ +..++|++.|.+.|+..|+++.|||++|..+-..+...-.. .......+++..++.
T Consensus 326 l~dp~l~Hy~ifSdN--VLAasVVVnStv~na~~p~k~VFHivTD~~ny~aM~~WF~~--n~~~~A~v~V~nie~f~wln 401 (639)
T PLN02829 326 LEDPQLYHYALFSDN--VLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLV--NPPGKATIQVQNIEEFTWLN 401 (639)
T ss_pred ccCCccceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccchHHHHHHHhh--CCCccceEEEEehhhccccc
Confidence 568899999999996 66888999999999999999999999998876544433221 122233444433321
Q ss_pred ----hhHHhhhhhh-------------------hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccC
Q 047424 138 ----DTVINLISSS-------------------IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDIT 194 (379)
Q Consensus 138 ----~~~~~~is~~-------------------i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~d 194 (379)
..++.+-+.. .+..+.|.++|+||+||++||+ ++||||||+|+||++||++||++|
T Consensus 402 ~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP~-LdKVLYLD~DVVVqgDLseLw~iD 480 (639)
T PLN02829 402 SSYSPVLKQLGSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFPK-LNKVLFLDDDIVVQKDLTGLWSID 480 (639)
T ss_pred ccccHHHHHhhhhhhhhhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhcc-cCeEEEEeCCEEeCCChHHHHhCC
Confidence 1111111100 1134567899999999999996 999999999999999999999999
Q ss_pred CCCCeeEeeccccccCcccccccCCCCChhhhhhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCC
Q 047424 195 LTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLG 274 (379)
Q Consensus 195 l~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~g 274 (379)
|+ ++++||+++|..+++.|....+|++|.+.+.|. ...||||+|||||||++||+.+++++++.|++.+.++.+|++|
T Consensus 481 L~-gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn-~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlg 558 (639)
T PLN02829 481 LK-GNVNGAVETCGESFHRFDRYLNFSNPLISKNFD-PHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLG 558 (639)
T ss_pred CC-CceEEEeccchhhhhhhhhhhhccchHhhhccC-CcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCcccccc
Confidence 98 468899999988777776666778887766554 4789999999999999999999999999999988777889999
Q ss_pred CchHHHHhcccCceecccccccccCCCCCcccccccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCCc
Q 047424 275 SLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS 352 (379)
Q Consensus 275 dqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 352 (379)
.+|++.++|+|+++.||++||++++|++.- ..++.+ .+++||||+|+.|||...+.. +|+++|.+|..+...
T Consensus 559 aLPp~Ll~F~g~i~~LD~rWNv~GLGy~~~-v~~~~i--~~aaIIHynG~~KPWle~~i~---~yr~lW~kYl~~~~~ 630 (639)
T PLN02829 559 TLPPGLITFWKRTYPLDRSWHVLGLGYNPN-VNQRDI--ERAAVIHYNGNMKPWLEIGIP---KYRNYWSKYVDYDQV 630 (639)
T ss_pred CCChHHHHhcCceEecChhheecCCCCCcc-cchhcc--cCCeEEEECCCCCccccCCcc---cchHHHHHHHhcCch
Confidence 999999999999999999999999987532 223333 357999999999999998653 699999999988763
No 6
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=1.1e-47 Score=384.75 Aligned_cols=277 Identities=30% Similarity=0.559 Sum_probs=226.7
Q ss_pred CCCCCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHH-hcCCceeEEEEEech-hh
Q 047424 62 SSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVR-STFPSLNFKVYIFRE-DT 139 (379)
Q Consensus 62 ~~~~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~-~~~~~l~~~~~~~d~-~~ 139 (379)
...||+..|.|+.+|+ +.+++|+|.|++.|+.+|+++.|||+||..+-.. ++.++. ..++...++++.++. +.
T Consensus 221 ~l~d~~l~Hy~ifSdN--vlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~a---M~~WF~~n~~~~a~v~V~n~e~f~w 295 (534)
T PLN02742 221 RLVDNNLYHFCVFSDN--ILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGA---MQAWFAMNDFKGVTVEVQKIEEFSW 295 (534)
T ss_pred cccCCCcceEEEEecc--chhhhhhhhhhHhhhcCCCcEEEEEeechhhHHH---HHHHHhhCCCCccEEEEEEeccccc
Confidence 3568899999999996 7789999999999999999999999999877654 444443 234466777777754 11
Q ss_pred HHh--------hhhhh------------------h-HhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhc
Q 047424 140 VIN--------LISSS------------------I-REALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWD 192 (379)
Q Consensus 140 ~~~--------~is~~------------------i-~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~ 192 (379)
+.+ +-+.. . +..+.++.+|+||+||++||+ ++||||||+|+||++||++||+
T Consensus 296 l~~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~-l~KvlYLD~DvVV~~DL~eL~~ 374 (534)
T PLN02742 296 LNASYVPVLKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPA-LEKVVFLDDDVVVQKDLTPLFS 374 (534)
T ss_pred cccccchHHHHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhhc-cCeEEEEeCCEEecCChHHHhc
Confidence 111 00000 0 134567899999999999996 9999999999999999999999
Q ss_pred cCCCCCeeEeeccccccCcccccccCCCCChhhhhhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCC
Q 047424 193 ITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYD 272 (379)
Q Consensus 193 ~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~ 272 (379)
+||+ ++++||+++|..++.+|.+..+|++|.+++.+. ++.||||+|||||||++||++++++.+..|++.+.+..+|+
T Consensus 375 ~DL~-~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~-~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d 452 (534)
T PLN02742 375 IDLH-GNVNGAVETCLETFHRYHKYLNFSHPLISSHFD-PDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWK 452 (534)
T ss_pred CCCC-CCEEEEeCchhhhhhhhhhhhcccchhhhccCC-CCccccccCcEEEeHHHHHhhcHHHHHHHHHHhcccccccc
Confidence 9999 578899999988888887777889888876554 47899999999999999999999999989998888778999
Q ss_pred CCCchHHHHhcccCceecccccccccCCCCCcccccccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCCc
Q 047424 273 LGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS 352 (379)
Q Consensus 273 ~gdqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 352 (379)
+|++++++++|+|+++.||++||+.++|++.... ++.. .+++||||+|+.|||...+.. ++.++|++|..++..
T Consensus 453 ~gaLpp~LLaF~g~~~~LD~rWNv~gLG~~~~v~-~~~i--~~aaILHynG~~KPWl~~~i~---~yr~~W~kYl~~s~~ 526 (534)
T PLN02742 453 LGTLPPGLLTFYGLTEPLDRRWHVLGLGYDTNID-PRLI--ESAAVLHFNGNMKPWLKLAIE---RYKPLWERYVNYSHP 526 (534)
T ss_pred ccccchHHHHHcCcceecChhheecccccccccc-hhhc--cCCeEEEECCCCCcccccCCc---ccchHHHHHHccCCH
Confidence 9999999999999999999999999998753211 1222 457999999999999998653 588999999998764
No 7
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=1.1e-46 Score=380.64 Aligned_cols=276 Identities=26% Similarity=0.508 Sum_probs=221.9
Q ss_pred CCCCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHH-hcCCceeEEEEEech----
Q 047424 63 SCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVR-STFPSLNFKVYIFRE---- 137 (379)
Q Consensus 63 ~~~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~-~~~~~l~~~~~~~d~---- 137 (379)
..||+..|.|+.+|+ +..++|++.|.+.|+..|+++.|||+||..+-..+.. ++. .......+++..++.
T Consensus 340 l~dp~l~Hy~ifSDN--VLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny~aM~~---WF~~n~~~~A~V~V~nie~f~wl 414 (657)
T PLN02910 340 LEDPSLYHYAIFSDN--VLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAMKM---WFIINPPAKATIQVENIDDFKWL 414 (657)
T ss_pred ccCCcceeEEEEecc--eeeEEeehhhhhhcccCccceEEEEecCccccHHHHH---HHhhCCCccceEEEeehhhcccc
Confidence 568899999999996 6688999999999999999999999999887654433 332 122223344333321
Q ss_pred -----hhHHhhhh--------------h--------hhH-hhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHh
Q 047424 138 -----DTVINLIS--------------S--------SIR-EALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHK 189 (379)
Q Consensus 138 -----~~~~~~is--------------~--------~i~-~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~e 189 (379)
..++.+-+ . ..+ ..+.|+++|+||+||++||+ ++||||||+|+||++||++
T Consensus 415 n~~~~pvl~qles~~~~~~yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp~-l~KVLYLD~DVVV~gDLse 493 (657)
T PLN02910 415 NSSYCSVLRQLESARIKEYYFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYPK-LEKILFLDDDIVVQKDLTP 493 (657)
T ss_pred cccccHHHHHHhhhhhhhhhhhccccccccccccccccCCcchhhHHHHHHHHHHHHhhh-cCeEEEEeCCEEecCchHH
Confidence 01111000 0 001 34567899999999999996 9999999999999999999
Q ss_pred HhccCCCCCeeEeeccccccCcccccccCCCCChhhhhhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhcccc
Q 047424 190 LWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKR 269 (379)
Q Consensus 190 L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~ 269 (379)
||++||+| +++||+++|..+|..+....+|++|.+++.|. ...||||+|||||||++||+.++++.+..|++.+.+..
T Consensus 494 Lw~iDL~g-~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFN-s~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~ 571 (657)
T PLN02910 494 LWSIDMQG-MVNGAVETCKESFHRFDKYLNFSNPKISENFD-PNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRT 571 (657)
T ss_pred HHhCCcCC-ceEEEecccchhhhhhhhhhccCChhhhhccC-CCCceeecccEEEeHHHHHHhhHHHHHHHHHHhccccc
Confidence 99999995 68899999998877777777788888877554 37999999999999999999999998888999888888
Q ss_pred CCCCCCchHHHHhcccCceecccccccccCCCCCcccccccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhccccc
Q 047424 270 IYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLF 349 (379)
Q Consensus 270 ~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~ 349 (379)
+|++|.+|++.++|+|+++.||++||++++|++.....+ .+ .+++||||+|+.|||...+. ++|+++|.+|..+
T Consensus 572 L~dqgsLPpgLLvF~g~i~pLD~rWNv~GLGyd~~v~~~-~i--~~AAVLHynG~~KPWl~l~i---~~Yr~~W~kYl~~ 645 (657)
T PLN02910 572 LWKLGSLPPGLITFYNLTYPLDRSWHVLGLGYDPALNQT-EI--ENAAVVHYNGNYKPWLDLAI---AKYKPYWSRYVQY 645 (657)
T ss_pred ccccCCCChHHHHHhCceeecCchheecCCCCCcccccc-cc--cCcEEEEeCCCCCcccccCc---ccchHHHHHHccC
Confidence 999999999999999999999999999999987654433 22 45899999999999999865 3699999999987
Q ss_pred CCc
Q 047424 350 KHS 352 (379)
Q Consensus 350 ~~~ 352 (379)
...
T Consensus 646 d~~ 648 (657)
T PLN02910 646 DNP 648 (657)
T ss_pred CCh
Confidence 753
No 8
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=3.9e-46 Score=356.97 Aligned_cols=270 Identities=21% Similarity=0.291 Sum_probs=195.9
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhh
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSI 148 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i 148 (379)
+.||+|. .+|+++++|+|+||++|+. ..++|||+++++++++++.|.+.... .++++.++.++. ..+.++. .
T Consensus 3 ~~iv~~~-~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~s~~~~~~l~~~~~~--~~~~i~f~~i~~--~~~~~~~-~ 74 (280)
T cd06431 3 VAIVCAG-YNASRDVVTLVKSVLFYRR--NPLHFHLITDEIARRILATLFQTWMV--PAVEVSFYNAEE--LKSRVSW-I 74 (280)
T ss_pred EEEEEcc-CCcHHHHHHHHHHHHHcCC--CCEEEEEEECCcCHHHHHHHHHhccc--cCcEEEEEEhHH--hhhhhcc-C
Confidence 5678888 8999999999999999975 66999999999999988888776532 346677776642 2222211 0
Q ss_pred HhhhcCc-chhHHhhhhhhccccCCeEEEEecceEEecchHhHhcc--CCCCCeeEeeccccccCcccccccCCCCChhh
Q 047424 149 REALENP-LNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDI--TLTKSKIIGAPEYCHANFTKYFTDNFWSDPLL 225 (379)
Q Consensus 149 ~~~~~s~-~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~--dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l 225 (379)
...+.+. .+|+||++|++||++++||||||+|+||++||++||++ ++.++.++||+++.. .++....|..
T Consensus 75 ~~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~----~~~~~~~~~~--- 147 (280)
T cd06431 75 PNKHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQS----DWYLGNLWKN--- 147 (280)
T ss_pred cccchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccch----hhhhhhhhhc---
Confidence 1112233 37899999999997799999999999999999999998 788778888877531 1221111110
Q ss_pred hhhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhcc-ccCCCCCCchHHHHhcccC---ceecccccccccCCC
Q 047424 226 SRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRR-KRIYDLGSLPPFLLVFAGN---VEAIDHRWNQHGLGG 301 (379)
Q Consensus 226 ~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~-~~~~~~gdqd~lN~vf~g~---i~~L~~~wN~~~~~~ 301 (379)
.... .....|||||||||||++||++++++++....++... ......+|||+||.+|.|+ ++.||++||++...
T Consensus 148 ~~~~-~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~~~- 225 (280)
T cd06431 148 HRPW-PALGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQLSD- 225 (280)
T ss_pred cCCC-cccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCccccccCc-
Confidence 0000 1113599999999999999999999998776655422 1123568999999999999 89999999998532
Q ss_pred CCcccccccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCCchhhhhccccc
Q 047424 302 DNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHSNRIKDHHQSS 362 (379)
Q Consensus 302 ~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~~~~~~~~~~ 362 (379)
......+.. ....++||||+|+.|||...+ +-++++++|.+|.+++.. ++||++
T Consensus 226 ~~~~~~~~~-~~~~p~IIHf~g~~KPW~~~~--~~~~~~~~~~~~~~~~~~----~l~~~~ 279 (280)
T cd06431 226 HTRSEQCYR-DVSDLKVIHWNSPKKLRVKNK--HVEFFRNLYLTFLEYDGN----LLRREL 279 (280)
T ss_pred cchHhHhhc-CcCCCEEEEeCCCCCCCCcCC--CChHHHHHHHHHHhcCch----hhhhhc
Confidence 111111211 124689999999999998653 225899999999999864 777765
No 9
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=8.3e-45 Score=363.41 Aligned_cols=275 Identities=28% Similarity=0.553 Sum_probs=207.6
Q ss_pred CCCCCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEech----
Q 047424 62 SSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFRE---- 137 (379)
Q Consensus 62 ~~~~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~---- 137 (379)
...||+..|.|+.+|+ +..++|++.|.+.|+..|+++.|||+||..+-..+...-.. .......+++..++.
T Consensus 200 ~l~dp~~~Hy~ifSdN--vLAasVvvnStv~~a~~p~~~VFHvvTD~~n~~aM~~WF~~--n~~~~a~v~V~~~e~f~wl 275 (533)
T PLN02870 200 VLSDNSYHHFVLSTDN--ILAASVVVSSTVQSSLKPEKIVFHVITDKKTYAGMHSWFAL--NSVSPAIVEVKGVHQFDWL 275 (533)
T ss_pred cccCCcceeEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhh--CCCccceEEEEehhhcccc
Confidence 3568899999999996 66888999999999999999999999998776544333221 122223343333321
Q ss_pred --h---hHHh---------hh-h-----------------h---hhHhhhcCcchhHHhhhhhhccccCCeEEEEecceE
Q 047424 138 --D---TVIN---------LI-S-----------------S---SIREALENPLNYARNYLGDILDPCVDRVIYIDSDLV 182 (379)
Q Consensus 138 --~---~~~~---------~i-s-----------------~---~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvI 182 (379)
+ .++. .. + . ..+..+.|+++|+||+||++||+ ++||||||+|+|
T Consensus 276 ~~~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~lny~Rl~LPelLP~-LdKVLYLD~DVV 354 (533)
T PLN02870 276 TRENVPVLEAVESHNGIRNYYHGNHIAGANLSETTPRTFASKLQARSPKYISLLNHLRIYLPELFPN-LDKVVFLDDDVV 354 (533)
T ss_pred ccccchHHHHHhhhHHHHHHhhcccccccccccccchhhhcccccCCccccCHHHHHHHHHHHHhhh-cCeEEEEeCCEE
Confidence 0 0100 00 0 0 01234567899999999999996 999999999999
Q ss_pred EecchHhHhccCCCCCeeEeeccccccC--------cccccccCCCCChhhhhhcCCCCCccceeeeEEEecHHHhhhhH
Q 047424 183 LVDDIHKLWDITLTKSKIIGAPEYCHAN--------FTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNY 254 (379)
Q Consensus 183 V~~DI~eL~~~dl~~~~~~aa~e~~~~~--------~~~y~~~~~w~~~~l~~~~~~~~~~YFNSGVmLinL~kwR~~~~ 254 (379)
|++||++||++||+ ++++||+++|... +.+|| ++++|.....+. ++.||||||||||||++||+.++
T Consensus 355 VqgDLseLw~iDL~-gkviaAVeDc~~~~~~~~~~~~~~Yf---Nfs~p~i~~~fd-~~~cyfNSGVlLINL~~WRe~nI 429 (533)
T PLN02870 355 IQRDLSPLWDIDLG-GKVNGAVETCRGEDEWVMSKRFRNYF---NFSHPLIAKNLD-PEECAWAYGMNIFDLRAWRKTNI 429 (533)
T ss_pred ecCcHHHHhhCCCC-CceEEEEccccccchhhhhhhhhhhc---ccccchhhcccC-cccceeeccchhccHHHHHHcCh
Confidence 99999999999998 5688888988431 22344 356666655444 46899999999999999999999
Q ss_pred HHHHHHHHHHhcc--ccCCCCCCchHHHHhcccCceecccccccccCCCCCcccccccCCCCCCEEEeccCCCCCCCcCC
Q 047424 255 RKRIENWMEIQRR--KRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLD 332 (379)
Q Consensus 255 ~~~~~~~~~~~~~--~~~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~ 332 (379)
++++.+|++++.. ...|+||.+++.|++|.|+++.||.+||+.++|++.. ... .. ..+++||||+|+.|||+..+
T Consensus 430 Tek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~~-~~~-~~-i~~aaIIHY~G~~KPW~~~~ 506 (533)
T PLN02870 430 RETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQSK-TNI-ES-VKKAAVIHYNGQSKPWLEIG 506 (533)
T ss_pred HHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCCCCccc-ccc-cc-cCCcEEEEECCCCCCccccC
Confidence 9999999987643 3567888888889999999999999999998886432 111 11 24589999999999999775
Q ss_pred CCCCCchhhhhhcccccCCc
Q 047424 333 NKQPCPLDYLWEPYDLFKHS 352 (379)
Q Consensus 333 ~~~~~~~~~lW~~Y~~~~~~ 352 (379)
.. +++.+|.+|..++..
T Consensus 507 ~~---~yr~~W~kYl~~s~~ 523 (533)
T PLN02870 507 FE---HLRPFWTKYVNYSND 523 (533)
T ss_pred cc---chhHHHHHHHccCch
Confidence 42 599999999998764
No 10
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=3.7e-44 Score=346.80 Aligned_cols=265 Identities=18% Similarity=0.289 Sum_probs=204.6
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.++||+++|+||+.+++|+|+||+.|++. -.+.||++++++++|++.+|++++.... ..+.++.+|.+.+...++.
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~e~~~~l~~~~~~f~--~~i~~~~id~~~~~~~~~~- 77 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNEEDKKKLNETAEPFK--SFIVLEVIDIEPFLDYPPF- 77 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCHHHHHHHHHHHHhhc--cceeeEEEechhhhccccc-
Confidence 58999999999999999999999999973 4799999999999999999999986533 2445566677777665521
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhhh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSR 227 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~ 227 (379)
+..++.++|+|+++++++|+ ++|+||||+|+||+|||++||.+++++. .+||+.++... +. .....++
T Consensus 78 --~~~~s~~v~~R~fiadlf~~-~dK~lylD~Dvi~~g~l~~lf~~~~~~~-~~aaV~D~~~~---~~-----~~~~~~~ 145 (325)
T COG1442 78 --TKRFSKMVLVRYFLADLFPQ-YDKMLYLDVDVIFCGDLSELFFIDLEEY-YLAAVRDVFSH---YM-----KEGALRL 145 (325)
T ss_pred --ccchHHHHHHHHHHHHhccc-cCeEEEEecCEEEcCcHHHHHhcCCCcc-eEEEEeehhhh---hh-----hhhhhHh
Confidence 23456899999999999998 7999999999999999999999999954 55555553211 11 0001111
Q ss_pred hcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCceecccccccccCCCCCcccc
Q 047424 228 VFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGS 307 (379)
Q Consensus 228 ~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~~~ 307 (379)
.-......|||||||++|++.||+++++++++++++...+ .+..+|||++|.+|.|++..||.+||++..........
T Consensus 146 ~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~--~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~~ 223 (325)
T COG1442 146 EKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKEN--DLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKDK 223 (325)
T ss_pred hhcccccccCccceeeehHHHHHHhhhHHHHHHHHhcccc--ccCCccccHHHHHHHhhhhccCcccceeehhhhccchh
Confidence 1122346799999999999999999999999999876653 34567899999999999999999999996432211111
Q ss_pred cccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCCc
Q 047424 308 CRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS 352 (379)
Q Consensus 308 ~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 352 (379)
+......++.|+||+|+.|||+.....+++ ...|.+....+|.
T Consensus 224 ~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~--~~~w~~i~~~~p~ 266 (325)
T COG1442 224 YIYPFGDDPVILHYAGPTKPWHSDSSNYPR--SHEWHEILAETPW 266 (325)
T ss_pred hhccCCCCceEEEecCCCCCCcCccccccH--HHHHHHHHhcCCc
Confidence 111123568999999999999998765432 7889999988887
No 11
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=2.6e-44 Score=359.96 Aligned_cols=278 Identities=24% Similarity=0.497 Sum_probs=205.5
Q ss_pred CCCCCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEech----
Q 047424 62 SSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFRE---- 137 (379)
Q Consensus 62 ~~~~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~---- 137 (379)
...||+..|.|+.+|+ +..++|++.|.+.|+..|+++.|||+||..+-..+...-.. .......+++..++.
T Consensus 201 ~l~d~~l~Hy~ifSdN--vLAasVVvnStv~~a~~p~~~VFHivTD~~ny~aM~~WF~~--n~~~~a~v~V~~~e~f~wl 276 (534)
T PLN02659 201 ALVDNSYFHFVLASDN--ILAASVVANSLVQNALRPHKFVLHIITDRKTYSPMQAWFSL--HPLSPAIIEVKALHHFDWF 276 (534)
T ss_pred ccCCCCcceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhh--CCCccceEEEEeehhcccc
Confidence 3568899999999996 66888999999999999999999999998876544433221 122233344333321
Q ss_pred --h---hHHhhhh-----------------h-------------hhHhhhcCcchhHHhhhhhhccccCCeEEEEecceE
Q 047424 138 --D---TVINLIS-----------------S-------------SIREALENPLNYARNYLGDILDPCVDRVIYIDSDLV 182 (379)
Q Consensus 138 --~---~~~~~is-----------------~-------------~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvI 182 (379)
+ .++..-+ . ..+..+.|.++|+||+||++||+ ++||||||+|||
T Consensus 277 ~~~~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~~nY~RL~IPeLLP~-LdKVLYLD~DVV 355 (534)
T PLN02659 277 AKGKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKPHVIAAKLQALSPKYNSVMNHIRIHLPELFPS-LNKVVFLDDDIV 355 (534)
T ss_pred cccccHHHHHHhhhhhhhhhhcccccccccccccCccccccccccCCccceeHHHHHHHHHHHHhhh-cCeEEEeeCCEE
Confidence 1 0111000 0 01223456689999999999996 999999999999
Q ss_pred EecchHhHhccCCCCCeeEeeccccccC--c---ccccccCCCCChhhhhhcCCCCCccceeeeEEEecHHHhhhhHHHH
Q 047424 183 LVDDIHKLWDITLTKSKIIGAPEYCHAN--F---TKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKR 257 (379)
Q Consensus 183 V~~DI~eL~~~dl~~~~~~aa~e~~~~~--~---~~y~~~~~w~~~~l~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~ 257 (379)
|++||++||++||+ ++++||+++|... + .++.....+++|.+.+.|. ...||||||||||||++||+.+++++
T Consensus 356 VqgDLseLw~iDL~-gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yFn-~~~cYfNsGVlLINLk~WRe~nITek 433 (534)
T PLN02659 356 VQTDLSPLWDIDMN-GKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNFD-PNECAWAYGMNIFDLEAWRKTNISST 433 (534)
T ss_pred EcCchHHHHhCCCC-CcEEEEeeccccccchhhhHHHHHhhcccchhhhhccC-ccccceecceeEeeHHHHHhcChHHH
Confidence 99999999999999 4688888988532 1 1111111344555554343 46899999999999999999999999
Q ss_pred HHHHHHHhcc--ccCCCCCCchHHHHhcccCceecccccccccCCCCCcccccccCCCCCCEEEeccCCCCCCCcCCCCC
Q 047424 258 IENWMEIQRR--KRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQ 335 (379)
Q Consensus 258 ~~~~~~~~~~--~~~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~ 335 (379)
+++|++++.. ...|++|.+++.|++|.|+++.||++||+.++|++.-.. ... .++++||||+|+.|||+..+.
T Consensus 434 ~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~~~-~~~--i~~paIIHYnG~~KPW~~~~~-- 508 (534)
T PLN02659 434 YHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTS-LAD--AESAGVVHFNGRAKPWLDIAF-- 508 (534)
T ss_pred HHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecCCccccccc-ccc--cCCcEEEEECCCCCccccccC--
Confidence 9999988642 345677777777899999999999999999887643211 111 246899999999999999764
Q ss_pred CCchhhhhhcccccCCc
Q 047424 336 PCPLDYLWEPYDLFKHS 352 (379)
Q Consensus 336 ~~~~~~lW~~Y~~~~~~ 352 (379)
++++++|.+|..++..
T Consensus 509 -~~yr~~W~kYl~~s~~ 524 (534)
T PLN02659 509 -PQLRPLWAKYIDSSDK 524 (534)
T ss_pred -CcchhHHHHHhccCCH
Confidence 3799999999999864
No 12
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=1.3e-43 Score=334.17 Aligned_cols=241 Identities=21% Similarity=0.340 Sum_probs=177.3
Q ss_pred eeEEEEeCC-cchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 69 VHVAMTLDS-EYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 69 i~I~~~~D~-~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
|||++++++ +|+++++|+++||++|++. .++|||+++++++++++.|+++.... +.+++++.++......... .
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~~~~--~~~i~~~~~~~~~~~~~~~-~ 75 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLRKLY--NFNYELIPVDILDSVDSEH-L 75 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHHhcc--CceEEEEeccccCcchhhh-h
Confidence 577765555 9999999999999999874 79999999999999999998876432 4466666665432221111 0
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCc-ccccccCCCCChhhh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANF-TKYFTDNFWSDPLLS 226 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~-~~y~~~~~w~~~~l~ 226 (379)
..+.++.+|+||++|+++| +++||||||+|+||++||++||++++++. .+||+.+|.... ..++. .|
T Consensus 76 --~~~~~~~~y~RL~i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~-~~aav~d~~~~~~~~~~~--~~------ 143 (246)
T cd00505 76 --KRPIKIVTLTKLHLPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQ-ELAAAPDPGDRREGKYYR--QK------ 143 (246)
T ss_pred --cCccccceeHHHHHHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCC-eEEEccCchhhhccchhh--cc------
Confidence 1355789999999999999 59999999999999999999999999855 555555553211 11110 00
Q ss_pred hhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccC---ceecccccccccCCCCC
Q 047424 227 RVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGN---VEAIDHRWNQHGLGGDN 303 (379)
Q Consensus 227 ~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~---i~~L~~~wN~~~~~~~~ 303 (379)
.......+||||||||||+++||+++..+++.++..++... ...+|||+||.+|.++ +..||++||++..+...
T Consensus 144 -~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~--~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~ 220 (246)
T cd00505 144 -RSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSS--LSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYR 220 (246)
T ss_pred -cCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhccc--CccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccc
Confidence 11123467999999999999999888888777766554432 3557999999999998 99999999998654322
Q ss_pred cccccccCCCCCCEEEeccCCCCCCCc
Q 047424 304 VKGSCRSLHPGPVSLLHWSGKGKPWVR 330 (379)
Q Consensus 304 ~~~~~~~l~~~~~~IIHf~G~~KPW~~ 330 (379)
.. .+......+++||||+|+.|||++
T Consensus 221 ~~-~~~~~~~~~~~iiHy~g~~KPW~~ 246 (246)
T cd00505 221 SL-NCFKAFVKNAKVIHFNGPTKPWNK 246 (246)
T ss_pred cc-cchhhhcCCCEEEEeCCCCCCCCC
Confidence 11 121112346899999999999974
No 13
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=3.7e-44 Score=365.17 Aligned_cols=271 Identities=20% Similarity=0.388 Sum_probs=203.3
Q ss_pred CCCCCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHh-cCCceeEEEEEech---
Q 047424 62 SSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRS-TFPSLNFKVYIFRE--- 137 (379)
Q Consensus 62 ~~~~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~-~~~~l~~~~~~~d~--- 137 (379)
...||+..|.|+.+|+ +.+++|+|.|++.|+..|+++.|||+||..+-. .++.++.. ......+++..++.
T Consensus 324 ~l~d~~l~Hy~ifSdN--vlAasvvvNStv~na~~p~~~VFHiVTD~~n~~---am~~WF~~n~~~~a~v~v~n~e~~~~ 398 (629)
T PLN02769 324 KFSDPSLRHYVIFSKN--VLAASVVINSTVVHSRESGNIVFHVLTDAQNYY---AMKHWFDRNSYKEAAVQVLNIEDLIL 398 (629)
T ss_pred hccCCccceEEEEecc--ceeeeeehhhhhhhccCccceEEEEecChhhHH---HHHHHHhcCCCccceEEEeeeeeeee
Confidence 3568899999999996 778899999999999999999999999987654 44444432 12222232222211
Q ss_pred -----hhHHhh--------------hh--hhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCC
Q 047424 138 -----DTVINL--------------IS--SSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLT 196 (379)
Q Consensus 138 -----~~~~~~--------------is--~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~ 196 (379)
..++.+ .+ ...+..+.++++|+||+||++||+ ++||||||+|+||++||++||++||+
T Consensus 399 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~eyiS~~nh~RfyIPELLP~-LdKVLYLD~DVVVqgDLseLw~iDL~ 477 (629)
T PLN02769 399 KDLDKFALKQLSLPEEFRVSFRSVDNPSSKQMRTEYLSVFSHSHFLLPEIFKK-LKKVVVLDDDVVVQRDLSFLWNLDMG 477 (629)
T ss_pred cccchHHHHhhccchhhhhhhccCCCCchhccCcccccHHHHHHHHHHHHhhh-cCeEEEEeCCEEecCcHHHHhcCCCC
Confidence 011111 00 011345678899999999999996 99999999999999999999999999
Q ss_pred CCeeEeeccccccCcccccccCCCCChhhhhhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhcc--ccCCCCC
Q 047424 197 KSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRR--KRIYDLG 274 (379)
Q Consensus 197 ~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~--~~~~~~g 274 (379)
| +++||+++|...+..+.. .+......+..||||+|||||||++||+.++++++.+|++.... ...++++
T Consensus 478 g-kviAAVedc~~rl~~~~~-------yl~~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~ 549 (629)
T PLN02769 478 G-KVNGAVQFCGVRLGQLKN-------YLGDTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAA 549 (629)
T ss_pred C-CeEEEehhhhhhhhhhhh-------hhcccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhccccccccc
Confidence 5 678888888643322210 11111113468999999999999999999999999999987543 3567889
Q ss_pred CchHHHHhcccCceecccccccccCCCCCcccccccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCCc
Q 047424 275 SLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS 352 (379)
Q Consensus 275 dqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 352 (379)
+||++|++|.|+++.||++||++++|++..... .. ..+++||||+|+.|||+..+. ++++++||+|..+...
T Consensus 550 ~Lp~lnlvF~g~v~~LD~rWNv~gLG~~~~i~~--~~-i~~paIIHYnG~~KPW~e~~i---~~yr~~W~kYl~~~~~ 621 (629)
T PLN02769 550 ALPASLLTFQDLIYPLDDRWVLSGLGHDYGIDE--QA-IKKAAVLHYNGNMKPWLELGI---PKYKKYWKRFLNRDDR 621 (629)
T ss_pred CcCHHHHHhcCeEEECCHHHccccccccccccc--cc-cCCcEEEEECCCCCCccCCCC---ChHHHHHHHHhccCCh
Confidence 999999999999999999999998886532111 12 245899999999999998653 3699999999988753
No 14
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=1.5e-43 Score=333.76 Aligned_cols=242 Identities=19% Similarity=0.302 Sum_probs=187.6
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhh
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSI 148 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i 148 (379)
||||+|+|++|++++++++.||++|++. +.++|||++++++++.++.|+++... +..+++++.++...+.....
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~--~~~~i~~~~i~~~~~~~~~~--- 74 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISEENKKKLKELLKK--YNSSIEFIKIDNDDFKFFPA--- 74 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHHHHHHHHHh--cCCeEEEEEcCHHHHhcCCc---
Confidence 6999999999999999999999999875 67999999999999999999998765 34577778887654433221
Q ss_pred HhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhhhh
Q 047424 149 REALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRV 228 (379)
Q Consensus 149 ~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~ 228 (379)
...+++..+|+||++|+++|+ ++||||||+|+||++||++||++|++| ..+||+.+|....... .....
T Consensus 75 ~~~~~~~~~y~rl~l~~ll~~-~~rvlylD~D~lv~~di~~L~~~~~~~-~~~aa~~d~~~~~~~~---------~~~~~ 143 (248)
T cd04194 75 TTDHISYATYYRLLIPDLLPD-YDKVLYLDADIIVLGDLSELFDIDLGD-NLLAAVRDPFIEQEKK---------RKRRL 143 (248)
T ss_pred ccccccHHHHHHHHHHHHhcc-cCEEEEEeCCEEecCCHHHHhcCCcCC-CEEEEEecccHHHHHH---------HHhhc
Confidence 123556789999999999994 999999999999999999999999975 5566655554321110 00011
Q ss_pred cCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCceecccccccccCCCCCcccc-
Q 047424 229 FGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGS- 307 (379)
Q Consensus 229 ~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~~~- 307 (379)
......+||||||||+|+++||+.+++++++++++.+.. .+..+||++||.+|.+++..||.+||++..........
T Consensus 144 ~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~--~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~ 221 (248)
T cd04194 144 GGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGG--RLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKS 221 (248)
T ss_pred CCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCC--ceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccc
Confidence 123456799999999999999999999999999988654 24567999999999999999999999986432211100
Q ss_pred ----cccCCCCCCEEEeccCCCCCCC
Q 047424 308 ----CRSLHPGPVSLLHWSGKGKPWV 329 (379)
Q Consensus 308 ----~~~l~~~~~~IIHf~G~~KPW~ 329 (379)
......++++||||+|+.|||+
T Consensus 222 ~~~~~~~~~~~~~~iiHf~g~~KPW~ 247 (248)
T cd04194 222 KEEQELEEARKNPVIIHYTGSDKPWN 247 (248)
T ss_pred hhHHHHHHHhcCCEEEEeCCCCCCCC
Confidence 0011234689999999999997
No 15
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=1.4e-43 Score=355.92 Aligned_cols=276 Identities=25% Similarity=0.548 Sum_probs=200.7
Q ss_pred CCCCCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEech----
Q 047424 62 SSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFRE---- 137 (379)
Q Consensus 62 ~~~~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~---- 137 (379)
...||+..|.|+.+|+ +..++|++.|.+.|+..|+++.|||+||..+-..+...-.. .......+++..++.
T Consensus 205 ~l~d~~~~Hy~ifSdN--vLAasVvvnStv~~a~~p~~~VfHvvTD~~ny~aM~~WF~~--n~~~~a~v~V~~~~~f~wl 280 (535)
T PLN02867 205 RLTDPSFHHVVLLTDN--VLAASVVISSTVQNAANPEKLVFHIVTDKKTYTPMHAWFAI--NSIKSAVVEVKGLHQYDWS 280 (535)
T ss_pred hccCCCcceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhh--CCCccceEEEEeehhcccc
Confidence 3678899999999996 66888999999999999999999999998776544333221 112223344333221
Q ss_pred --h--hHHhhhh----------------------------hhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEec
Q 047424 138 --D--TVINLIS----------------------------SSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVD 185 (379)
Q Consensus 138 --~--~~~~~is----------------------------~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~ 185 (379)
. .+...+. ...+..+.|.++|+||+||++||+ ++||||||+|+||++
T Consensus 281 ~~~~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkylS~lnYlRflIPeLLP~-LdKVLYLD~DVVVqg 359 (535)
T PLN02867 281 QEVNVGVKEMLEIHRLIWSHYYQNLKESDFQFEGTHKRSLEALSPSCLSLLNHLRIYIPELFPD-LNKIVFLDDDVVVQH 359 (535)
T ss_pred ccccccHHHHHHHhhhhhhhhhccccccccccccccccchhhcChhhhhHHHHHHHHHHHHhhc-cCeEEEecCCEEEcC
Confidence 0 0100000 001234567899999999999996 999999999999999
Q ss_pred chHhHhccCCCCCeeEeeccc--cccC------cccccccCCCCChhhhhhcCCCCCccceeeeEEEecHHHhhhhHHHH
Q 047424 186 DIHKLWDITLTKSKIIGAPEY--CHAN------FTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKR 257 (379)
Q Consensus 186 DI~eL~~~dl~~~~~~aa~e~--~~~~------~~~y~~~~~w~~~~l~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~ 257 (379)
||++||++||+|+ ++||+.+ |... +.+|+ ++++|.+...+ .++.||||||||||||++||+.+++++
T Consensus 360 DLseLwdiDL~gk-viaAV~D~~c~~~~~~~~~~~~Yl---Nfsnp~i~~~~-~p~~cYFNSGVmLINL~~WRe~nITek 434 (535)
T PLN02867 360 DLSSLWELDLNGK-VVGAVVDSWCGDNCCPGRKYKDYL---NFSHPLISSNL-DQERCAWLYGMNVFDLKAWRRTNITEA 434 (535)
T ss_pred chHHHHhCcCCCC-eEEEEeccccccccccchhhhhhc---cccchhhhccC-CCCCcceecceeeeeHHHHHHhcHHHH
Confidence 9999999999965 5555533 3211 12233 35566544333 346899999999999999999999999
Q ss_pred HHHHHHHhcc--ccCCCCCCchHHHHhcccCceecccccccccCCCCCcccccccCCCCCCEEEeccCCCCCCCcCCCCC
Q 047424 258 IENWMEIQRR--KRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQ 335 (379)
Q Consensus 258 ~~~~~~~~~~--~~~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~ 335 (379)
+.+|++.+.. ..++++|.+++.+++|.|+++.||++||+.++|++... ..++. ..+++||||+|+.|||+..+..
T Consensus 435 ~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~~-~~~~~-i~~paIIHYnG~~KPW~e~~~~- 511 (535)
T PLN02867 435 YHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVAGLGSRPPE-VPREI-LESAAVLHFSGPAKPWLEIGFP- 511 (535)
T ss_pred HHHHHHhchhcccccccccccchHHHHhcCcEEECChhhcccCCCccccc-chhhh-cCCcEEEEECCCCCcccccCCC-
Confidence 9999998754 25666666666567999999999999999887764321 11122 2468999999999999997643
Q ss_pred CCchhhhhhcccccCCc
Q 047424 336 PCPLDYLWEPYDLFKHS 352 (379)
Q Consensus 336 ~~~~~~lW~~Y~~~~~~ 352 (379)
+++++|.+|..+...
T Consensus 512 --~yR~~W~kyl~~~~~ 526 (535)
T PLN02867 512 --EVRSLWYRHVNFSDK 526 (535)
T ss_pred --chhHHHHHhcCccch
Confidence 799999999887654
No 16
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=9.6e-40 Score=312.76 Aligned_cols=257 Identities=17% Similarity=0.305 Sum_probs=180.8
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecC-CCCcchHHHHHHHHhcCCceeEEEEEec--hhhHHhhhh
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAE-FDSASPRVLTQLVRSTFPSLNFKVYIFR--EDTVINLIS 145 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~-~s~~~~~~L~~~~~~~~~~l~~~~~~~d--~~~~~~~is 145 (379)
||||+.+-++++..+.++|+|++.|+. ..++|||++++ .+++..++|+++.......+..+++.+. .+..
T Consensus 1 ~~~~vv~~g~~~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~----- 73 (304)
T cd06430 1 MHLAVVACGERLEETLTMLKSAIVFSQ--KPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNA----- 73 (304)
T ss_pred CEEEEEEcCCcHHHHHHHHHHHHHhCC--CCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccch-----
Confidence 567755555569999999999999985 67999999998 6666666688774332222333455442 1111
Q ss_pred hhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhcc--CCCCCeeEeeccccccCcccccccCCCCCh
Q 047424 146 SSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDI--TLTKSKIIGAPEYCHANFTKYFTDNFWSDP 223 (379)
Q Consensus 146 ~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~--dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~ 223 (379)
+....+++|.+|+||++|++|| +++||||||+|+||.+||++||++ ++++..++|++++....-..|++ ...+.+
T Consensus 74 -~~ws~l~~~~~y~RL~ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~-~~~~~~ 150 (304)
T cd06430 74 -AEWKKLFKPCAAQRLFLPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYN-RFARHP 150 (304)
T ss_pred -hhhhhcccHHHHHHHHHHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhh-hhcccC
Confidence 0122455689999999999999 499999999999999999999999 99876677775431111011221 000110
Q ss_pred hhhhhcCCCCCccceeeeEEEecHHHhh-----------hhHHHHHHHHHHHhccccCCCCCCchHHHHhcccC---cee
Q 047424 224 LLSRVFGSRKPCYFNTGVMVMDLVRWRK-----------GNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGN---VEA 289 (379)
Q Consensus 224 ~l~~~~~~~~~~YFNSGVmLinL~kwR~-----------~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~---i~~ 289 (379)
. ....|||||||||||++||+ .+++++++++++++... ...+|||+||++|.++ ++.
T Consensus 151 -----~--~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~DQDiLN~v~~~~p~~~~~ 221 (304)
T cd06430 151 -----Y--YGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLK--ITWGDQDLINIIFHHNPEMLYV 221 (304)
T ss_pred -----c--ccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccC--CCCCCHHHHHHHHcCCCCeEEE
Confidence 1 12357999999999999999 77899999999877643 3457999999999998 899
Q ss_pred cccccccccCCCCCcccccccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccC
Q 047424 290 IDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFK 350 (379)
Q Consensus 290 L~~~wN~~~~~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~ 350 (379)
||++||++.... .+...|+..+.+.++||||+++.| +. .+. ..++.++.....++
T Consensus 222 Lp~~wN~~~d~~-~y~~~~~~~~~~~~~~~H~n~~~~--~~--~~~-~~f~~~~~~~~~~~ 276 (304)
T cd06430 222 FPCHWNYRPDHC-MYGSNCKAAEEEGVFILHGNRGVY--HS--DKQ-PAFRAVYEAIREYT 276 (304)
T ss_pred cCccccCCccce-eecccccccccccceEEEcCCCCC--CC--ccc-hHHHHHHHHHHhcc
Confidence 999999886321 112234433445689999998766 32 223 37888888888777
No 17
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=2e-40 Score=309.16 Aligned_cols=249 Identities=23% Similarity=0.397 Sum_probs=167.8
Q ss_pred eEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhH
Q 047424 70 HVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIR 149 (379)
Q Consensus 70 ~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~ 149 (379)
||++++|.+|+.+++|+++||++|++.+..++||+++++++++.++.|++....... . ..+...+.............
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 78 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIE-I-EPIEFPDISMLEEFQFNSPS 78 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCT-T-ECEEETSGGHHH--TTS-HC
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccc-e-eeeccchHHhhhhhhhcccc
Confidence 799999999999999999999999987678999999999999888888776532111 1 11223333322211111222
Q ss_pred hhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhhhhc
Q 047424 150 EALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVF 229 (379)
Q Consensus 150 ~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~~ 229 (379)
..+.++.+|+|++++++|++ ++||||||+|++|.+||++||+++++| ..+||++++ .+.... +.........
T Consensus 79 ~~~~~~~~~~rl~i~~ll~~-~drilyLD~D~lv~~dl~~lf~~~~~~-~~~~a~~~~--~~~~~~----~~~~~~~~~~ 150 (250)
T PF01501_consen 79 KRHFSPATFARLFIPDLLPD-YDRILYLDADTLVLGDLDELFDLDLQG-KYLAAVEDE--SFDNFP----NKRFPFSERK 150 (250)
T ss_dssp CTCGGGGGGGGGGHHHHSTT-SSEEEEE-TTEEESS-SHHHHC---TT-SSEEEEE------HHHH----TSTTSSEEEC
T ss_pred cccccHHHHHHhhhHHHHhh-cCeEEEEcCCeeeecChhhhhcccchh-hhccccccc--hhhhhh----hcccchhhcc
Confidence 34567899999999999976 999999999999999999999999995 556666551 111111 1100011111
Q ss_pred CCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCceecccccccccCCCCCcccccc
Q 047424 230 GSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCR 309 (379)
Q Consensus 230 ~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~~~~~ 309 (379)
.....+||||||||+|+++||++++.++++++++.+.. ....+||++||.+|.++++.||.+||++..+. +....+.
T Consensus 151 ~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~-~~~~~~~ 227 (250)
T PF01501_consen 151 QPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM--KLGFPDQDILNIVFYGNIKPLPCRYNCQPSWY-NQSDDYF 227 (250)
T ss_dssp ESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT--T-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHH-HHTHHHH
T ss_pred cCcccccccCcEEEEeechhhhhhhhhhhhhhhhhccc--ccCcCchHHHhhhccceeEEECchhccccccc-cccchhh
Confidence 12457899999999999999999999999999876554 34568999999999999999999999986533 0001111
Q ss_pred cCCCCCCEEEeccCCCCCCCcC
Q 047424 310 SLHPGPVSLLHWSGKGKPWVRL 331 (379)
Q Consensus 310 ~l~~~~~~IIHf~G~~KPW~~~ 331 (379)
.....+++||||+|..|||...
T Consensus 228 ~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 228 NPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp HHHGCC-SEEE--SSS-TTSTT
T ss_pred HhhcCCeEEEEeCCCCcCCCCC
Confidence 1112458999999999999863
No 18
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=100.00 E-value=2e-37 Score=292.24 Aligned_cols=235 Identities=14% Similarity=0.210 Sum_probs=168.2
Q ss_pred eeEEE-EeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEec-hhhHHhhhhh
Q 047424 69 VHVAM-TLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFR-EDTVINLISS 146 (379)
Q Consensus 69 i~I~~-~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d-~~~~~~~is~ 146 (379)
|||+. ++|+.|+++++|++.||++|+. ..++|||+++++++++++.|+++.++. +.+++++.++ +..+......
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~~~~l~~~~~~~--~~~i~~i~i~~~~~~~~~~~~ 76 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQFKEFLPEMAKEY--GFEYELVTYKWPRWLHKQTEK 76 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHHHHh--CCceEEEEecChhhhhccccc
Confidence 56664 4567899999999999999985 679999999999999999999987654 3466667776 3322221111
Q ss_pred hhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhh
Q 047424 147 SIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLS 226 (379)
Q Consensus 147 ~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~ 226 (379)
. ....+|+|++++++||++++||||||+|+||.+||++||++||+| +++||+++|..... .-....|......
T Consensus 77 -~----~~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~-~~~Aav~d~~~~~~-~~~~~~~~~~~~~ 149 (248)
T cd06432 77 -Q----RIIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKG-APYGYTPFCDSRKE-MDGFRFWKQGYWK 149 (248)
T ss_pred -c----hhHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCC-CeEEEeeccccchh-cccchhhhhhhhh
Confidence 0 013478999999999987999999999999999999999999995 57777776643210 0000112111001
Q ss_pred hhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccc-cCCCCCCchHHHHhcccC-ceecccccccccCCCCCc
Q 047424 227 RVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRK-RIYDLGSLPPFLLVFAGN-VEAIDHRWNQHGLGGDNV 304 (379)
Q Consensus 227 ~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~-~~~~~gdqd~lN~vf~g~-i~~L~~~wN~~~~~~~~~ 304 (379)
..+ ....|||||||||||++||++++++++.++++...+. ..+...|||+||.++.++ ++.||++||++..-
T Consensus 150 ~~l--~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~~---- 223 (248)
T cd06432 150 SHL--RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCETW---- 223 (248)
T ss_pred hhc--CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHHH----
Confidence 111 2345999999999999999999999887777643221 223456899999999886 99999999997421
Q ss_pred ccccccCCCCCCEEEeccC
Q 047424 305 KGSCRSLHPGPVSLLHWSG 323 (379)
Q Consensus 305 ~~~~~~l~~~~~~IIHf~G 323 (379)
|.+.....+.+|||..
T Consensus 224 ---~~~~~~~~~~~~~~~~ 239 (248)
T cd06432 224 ---CSDESKKKAKTIDLCN 239 (248)
T ss_pred ---hcccccCccceeeccc
Confidence 1111224578999985
No 19
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.97 E-value=2.2e-30 Score=243.51 Aligned_cols=225 Identities=18% Similarity=0.282 Sum_probs=153.7
Q ss_pred EEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEe-cCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhH
Q 047424 71 VAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFIS-AEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIR 149 (379)
Q Consensus 71 I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~-~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~ 149 (379)
+.+++|++|+.+++|+++||++|++. ++++++. +++++++++.|++.. ..+ +.+..++.........
T Consensus 4 ~t~~~~~~Y~~~a~vl~~SL~~~~~~---~~~~vl~~~~is~~~~~~L~~~~----~~~-~~v~~i~~~~~~~~~~---- 71 (240)
T cd02537 4 VTLLTNDDYLPGALVLGYSLRKVGSS---YDLVVLVTPGVSEESREALEEVG----WIV-REVEPIDPPDSANLLK---- 71 (240)
T ss_pred EEEecChhHHHHHHHHHHHHHhcCCC---CCEEEEECCCCCHHHHHHHHHcC----CEE-EecCccCCcchhhhcc----
Confidence 34667889999999999999999763 4556655 468888877777642 111 1112222111111001
Q ss_pred hhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhhhhc
Q 047424 150 EALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVF 229 (379)
Q Consensus 150 ~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~~ 229 (379)
......+|.|++++++.+ ++||||||+|++|++||++||++ ++.++|+++. . |
T Consensus 72 -~~~~~~~~~kl~~~~l~~--~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d~-~-----------~--------- 124 (240)
T cd02537 72 -RPRFKDTYTKLRLWNLTE--YDKVVFLDADTLVLRNIDELFDL---PGEFAAAPDC-G-----------W--------- 124 (240)
T ss_pred -chHHHHHhHHHHhccccc--cceEEEEeCCeeEccCHHHHhCC---CCceeeeccc-C-----------c---------
Confidence 112346899999999753 89999999999999999999987 3456665431 0 1
Q ss_pred CCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccC--ceecccccccccCCCCCcccc
Q 047424 230 GSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGN--VEAIDHRWNQHGLGGDNVKGS 307 (379)
Q Consensus 230 ~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~--i~~L~~~wN~~~~~~~~~~~~ 307 (379)
..|||||||++|+++ +..+++++++....+ +..+||++||.+|.++ +..||.+||++..........
T Consensus 125 ----~~~fNsGv~l~~~~~----~~~~~~~~~~~~~~~---~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~~ 193 (240)
T cd02537 125 ----PDLFNSGVFVLKPSE----ETFNDLLDALQDTPS---FDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPEA 193 (240)
T ss_pred ----cccccceEEEEcCCH----HHHHHHHHHHhccCC---CCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCchh
Confidence 259999999999964 455677777765543 5567999999999999 999999999985432211110
Q ss_pred cccCCCCCCEEEeccCCCCCCCcCCCCCC------Cchhhhhhccc
Q 047424 308 CRSLHPGPVSLLHWSGKGKPWVRLDNKQP------CPLDYLWEPYD 347 (379)
Q Consensus 308 ~~~l~~~~~~IIHf~G~~KPW~~~~~~~~------~~~~~lW~~Y~ 347 (379)
. .. ..+++||||+|+.|||+....... .....-||+.+
T Consensus 194 ~-~~-~~~~~iiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~w~~~~ 237 (240)
T cd02537 194 L-WF-GDEIKVVHFIGGDKPWSWWRDPETKEKDDYNELHQWWWDIY 237 (240)
T ss_pred h-cc-cCCcEEEEEeCCCCCCCCCcCCCcccccchHHHHHHHHHHH
Confidence 0 11 246899999999999997654311 24556677654
No 20
>PLN00176 galactinol synthase
Probab=99.97 E-value=8.1e-30 Score=247.72 Aligned_cols=258 Identities=15% Similarity=0.183 Sum_probs=159.4
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
..-.++++|++|+.|+.++.+||.++.+. .++.+ +++.+++++.++.|++ .+..+ ..+..+.+..-...+.
T Consensus 24 AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~-~~lVv-lVt~dVp~e~r~~L~~----~g~~V-~~V~~i~~~~~~~~~~-- 94 (333)
T PLN00176 24 AYVTFLAGNGDYVKGVVGLAKGLRKVKSA-YPLVV-AVLPDVPEEHRRILVS----QGCIV-REIEPVYPPENQTQFA-- 94 (333)
T ss_pred EEEEEEecCcchHHHHHHHHHHHHHhCCC-CCEEE-EECCCCCHHHHHHHHH----cCCEE-EEecccCCcccccccc--
Confidence 44555678889999999999999987542 44433 3467888876666644 22211 1111121110000111
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCC-----C
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWS-----D 222 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~-----~ 222 (379)
.+. -..+|.||.++++.. ++||||||+|+||+++|++||+++. +.++|| .+|..+...-..+..|- .
T Consensus 95 --~~~-~~i~~tKl~iw~l~~--ydkvlyLDaD~lv~~nid~Lf~~~~--~~~aAV-~dc~~~~~~~~~p~~~~~~c~~~ 166 (333)
T PLN00176 95 --MAY-YVINYSKLRIWEFVE--YSKMIYLDGDIQVFENIDHLFDLPD--GYFYAV-MDCFCEKTWSHTPQYKIGYCQQC 166 (333)
T ss_pred --cch-hhhhhhhhhhccccc--cceEEEecCCEEeecChHHHhcCCC--cceEEE-ecccccccccccccccccccccc
Confidence 001 125789999999774 8999999999999999999998853 455555 44543311000000000 0
Q ss_pred h-hh--hhhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCceecccccccccC
Q 047424 223 P-LL--SRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGL 299 (379)
Q Consensus 223 ~-~l--~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~ 299 (379)
+ .+ .+..+.+...||||||||+|+++|+.+++ +++++.... +..+|||+||.+|.++|+.||.+||++..
T Consensus 167 ~~~~~wp~~~g~~~~~yFNSGVlvinps~~~~~~l----l~~l~~~~~---~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~ 239 (333)
T PLN00176 167 PDKVTWPAELGPPPPLYFNAGMFVFEPSLSTYEDL----LETLKITPP---TPFAEQDFLNMFFRDIYKPIPPVYNLVLA 239 (333)
T ss_pred hhhccchhhccCCCCCeEEeEEEEEEcCHHHHHHH----HHHHHhcCC---CCCCCHHHHHHHHcCcEEECCchhcCchh
Confidence 0 00 01112234679999999999999997554 455554432 24589999999999999999999999742
Q ss_pred CCCCcccccccCCCCCCEEEeccC-CCCCCCcCCCCCC------CchhhhhhcccccCCc
Q 047424 300 GGDNVKGSCRSLHPGPVSLLHWSG-KGKPWVRLDNKQP------CPLDYLWEPYDLFKHS 352 (379)
Q Consensus 300 ~~~~~~~~~~~l~~~~~~IIHf~G-~~KPW~~~~~~~~------~~~~~lW~~Y~~~~~~ 352 (379)
......+. ...++++||||+| ..|||+..+.... ..+-+.||..+.....
T Consensus 240 ~~~~~~~~---~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~ 296 (333)
T PLN00176 240 MLWRHPEN---VELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYNDESL 296 (333)
T ss_pred hhhhChhh---cccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhccccc
Confidence 11111111 1134689999997 5799986542111 1345689998877654
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.91 E-value=9e-24 Score=201.14 Aligned_cols=215 Identities=13% Similarity=0.122 Sum_probs=140.5
Q ss_pred EEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhh
Q 047424 72 AMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREA 151 (379)
Q Consensus 72 ~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~ 151 (379)
-++++..|+.++.++.+||.++.+. .+. +.+++++.+......+.+..... ....+.+..++.....+ . ..
T Consensus 5 tl~Tn~~YL~gAlvL~~sLr~~gs~-~dl-VvLvt~~~~~~~~~~~~~~~~~l-~~~~~~v~~v~~~~~~~--~----~~ 75 (278)
T cd06914 5 NYATNADYLCNALILFEQLRRLGSK-AKL-VLLVPETLLDRNLDDFVRRDLLL-ARDKVIVKLIPVIIASG--G----DA 75 (278)
T ss_pred EEecChhHHHHHHHHHHHHHHhCCC-CCE-EEEECCCCChhhhhhHHHHHHHh-hccCcEEEEcCcccCCC--C----Cc
Confidence 3566889999999999999988763 222 22345566654333322211110 11123333343211111 1 11
Q ss_pred hcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhhhhcCC
Q 047424 152 LENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGS 231 (379)
Q Consensus 152 ~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~~~~ 231 (379)
.++ .+|.||.++++ ++ ++||||||+|++|+++|++||+++.. .. +|||.. .
T Consensus 76 ~~~-~~~tKl~~~~l-~~-y~kvlyLDaD~l~~~~ideLf~~~~~-~~-~Aap~~------------~------------ 126 (278)
T cd06914 76 YWA-KSLTKLRAFNQ-TE-YDRIIYFDSDSIIRHPMDELFFLPNY-IK-FAAPRA------------Y------------ 126 (278)
T ss_pred cHH-HHHHHHHhccc-cc-eeeEEEecCChhhhcChHHHhcCCcc-cc-eeeecC------------c------------
Confidence 122 46999999998 44 99999999999999999999998843 33 455441 1
Q ss_pred CCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccC-------ceecccc-cccccCCCCC
Q 047424 232 RKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGN-------VEAIDHR-WNQHGLGGDN 303 (379)
Q Consensus 232 ~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~-------i~~L~~~-wN~~~~~~~~ 303 (379)
.||||||||||+++|+.+++.+++.+...... ..+||++||.+|.|+ +..||++ ||.......+
T Consensus 127 ---~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~-----~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~ 198 (278)
T cd06914 127 ---WKFASHLMVIKPSKEAFKELMTEILPAYLNKK-----NEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFRE 198 (278)
T ss_pred ---ceecceeEEEeCCHHHHHHHHHHHHHhcccCC-----CCCChHHHHHHHhCCccccCcceEEcCccccccCChhhcc
Confidence 18999999999999999998888776543211 346899999999999 9999997 9987421100
Q ss_pred -----cccc----cccCC----CCCCEEEeccCC--CCCCCcCC
Q 047424 304 -----VKGS----CRSLH----PGPVSLLHWSGK--GKPWVRLD 332 (379)
Q Consensus 304 -----~~~~----~~~l~----~~~~~IIHf~G~--~KPW~~~~ 332 (379)
+.+. .+.+. -.+.++|||++. +|||....
T Consensus 199 ~~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 199 KLHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred cCHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcC
Confidence 1010 11111 135799999986 79999853
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.46 E-value=4.1e-13 Score=144.72 Aligned_cols=263 Identities=15% Similarity=0.250 Sum_probs=178.7
Q ss_pred CCCceeEE-EEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEec-hhhHHh
Q 047424 65 DPSLVHVA-MTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFR-EDTVIN 142 (379)
Q Consensus 65 ~~~~i~I~-~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d-~~~~~~ 142 (379)
+.+.|||+ +++.+-|-|.+.+++.|+++|+..| +.|+++-.-+|+.-++.+..+.+.+.- ++++..+. |.++.+
T Consensus 1178 ~~~vINIFSvASGHLYERflrIMm~SvlknTktp--VKFWfLkNyLSPtFKe~iP~mA~eYnF--eyElv~YkWPrWLhq 1253 (1470)
T KOG1879|consen 1178 DKEVINIFSVASGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNYLSPTFKESIPHMAKEYNF--EYELVQYKWPRWLHQ 1253 (1470)
T ss_pred ccceEEEEeeccccHHHHHHHHHHHHHHhCCCCc--eeEEeehhhcChHHHHHHHHHHHHhCc--eEEEEEecCchhhhh
Confidence 44589999 6666789999999999999999854 999999999999888888887765432 33333332 344432
Q ss_pred hhhhhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCC
Q 047424 143 LISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSD 222 (379)
Q Consensus 143 ~is~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~ 222 (379)
.-.. .| -...|--|||.=|||-+++||||+|+|-||+.|+.||.++|++| +..|-+..|..+ ...-..+||+.
T Consensus 1254 Q~EK-QR----iiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~G-aPygYtPfCdsR-~EMDGyRFWK~ 1326 (1470)
T KOG1879|consen 1254 QTEK-QR----IIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGG-APYGYTPFCDSR-REMDGYRFWKQ 1326 (1470)
T ss_pred hhhh-hh----hhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCC-CccccCcccccc-ccccchhHHhh
Confidence 2111 11 12467778899999999999999999999999999999999995 667776667533 12222346876
Q ss_pred hhhhhhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhcc--ccCCCCCCchH-HHHhcccCceecccccccccC
Q 047424 223 PLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRR--KRIYDLGSLPP-FLLVFAGNVEAIDHRWNQHGL 299 (379)
Q Consensus 223 ~~l~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~--~~~~~~gdqd~-lN~vf~g~i~~L~~~wN~~~~ 299 (379)
-+.++.+. +..|--|...|+||+|.|+..-.+++.-..+.... ..+-.+ |||. =|+...-.|+.||..|=+...
T Consensus 1327 GYW~~hL~--grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNL-DQDLPNnm~hqVpIkSLPqeWLWCET 1403 (1470)
T KOG1879|consen 1327 GYWKKHLR--GRKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNL-DQDLPNNMQHQVPIKSLPQEWLWCET 1403 (1470)
T ss_pred hHHHHHhc--cCccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhc-cccccccceeecccccCCcchhhhhh
Confidence 66665543 36788999999999999998888887654443221 122222 3553 356667789999999887643
Q ss_pred CCCCcccccccCCCCCCEEEeccCCCCCCCcCCC-CCCCchhhhhhcccccC
Q 047424 300 GGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDN-KQPCPLDYLWEPYDLFK 350 (379)
Q Consensus 300 ~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~-~~~~~~~~lW~~Y~~~~ 350 (379)
..++ .....+++|--+. -||..... ...-..-..|.+|+.--
T Consensus 1404 WC~d-------~skkkAktIDLCn--NP~TKEpKL~~A~Riv~EW~dyD~Ei 1446 (1470)
T KOG1879|consen 1404 WCDD-------ESKKKAKTIDLCN--NPLTKEPKLDAARRIVSEWTDYDAEI 1446 (1470)
T ss_pred hcCc-------hhhhhchhhhhhc--CccccchhhHHHhhhcCCCcccchHH
Confidence 2222 1123467777774 47776411 00112456788887643
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.96 E-value=2.4e-10 Score=107.98 Aligned_cols=171 Identities=25% Similarity=0.367 Sum_probs=104.3
Q ss_pred chhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccc--cCcccccccCCCC-C----------
Q 047424 156 LNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCH--ANFTKYFTDNFWS-D---------- 222 (379)
Q Consensus 156 ~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~--~~~~~y~~~~~w~-~---------- 222 (379)
..+.|+.+.+... +|||||||+|.||+.++++||.++. ..++|+++-.. +.|++--.+.+|+ .
T Consensus 155 ~mftKLrVfeqtE--yDRvifLDsDaivlknmDklFd~Pv--yef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r 230 (368)
T COG5597 155 DMFTKLRVFEQTE--YDRVIFLDSDAIVLKNMDKLFDYPV--YEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMR 230 (368)
T ss_pred HHhHHHHhhhhhh--hceEEEeccchHHhhhhHHHhcchh--hhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccH
Confidence 5789999998875 8999999999999999999998763 34566654311 1121111111221 0
Q ss_pred -----hh-----hhhhcC----CCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCC---CchHHHHhcc-
Q 047424 223 -----PL-----LSRVFG----SRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLG---SLPPFLLVFA- 284 (379)
Q Consensus 223 -----~~-----l~~~~~----~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~g---dqd~lN~vf~- 284 (379)
|+ ..+.+. +.-+.+||||.||++..++--. ++..++ .+ .+|+.. .|-.+|+.+.
T Consensus 231 ~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~----riv~~a--lP--klydda~mmeqsllnlaYn~ 302 (368)
T COG5597 231 AALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHML----RIVWFA--LP--KLYDDADMMEQSLLNLAYNY 302 (368)
T ss_pred hhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHH----HHHHHh--hH--HhhhhhhHHHHHHHHHHHhh
Confidence 10 011111 2235689999999999886653 333222 22 346532 2456677653
Q ss_pred -c--CceecccccccccCCCCCcccccccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCC
Q 047424 285 -G--NVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKH 351 (379)
Q Consensus 285 -g--~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~ 351 (379)
| -|..++.+|| |. -...+ ++ | -.+.+|+ |||...+...||.....|++=....+
T Consensus 303 ~g~FPwerld~~yN--G~--wa~~n---dl-P-ylka~Hg----K~W~y~g~~fp~i~~~ew~~daf~E~ 359 (368)
T COG5597 303 EGFFPWERLDPRYN--GY--WADAN---DL-P-YLKAWHG----KPWFYTGEQFPDIAGLEWPQDAFTEP 359 (368)
T ss_pred hccCchhhcCcccc--cc--ccccc---cc-c-hHHHhhc----CcCCCCcccChhhhcCcChhhhhhcH
Confidence 3 6788999988 21 11110 11 1 1345565 99999998899999999996544443
No 24
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=96.80 E-value=0.0024 Score=61.32 Aligned_cols=107 Identities=14% Similarity=0.190 Sum_probs=65.1
Q ss_pred EEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEe-cCCCCcchHHHHHHHHhcCCce---eEEEEEechhhHHhhhhh
Q 047424 71 VAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFIS-AEFDSASPRVLTQLVRSTFPSL---NFKVYIFREDTVINLISS 146 (379)
Q Consensus 71 I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~-~~~s~~~~~~L~~~~~~~~~~l---~~~~~~~d~~~~~~~is~ 146 (379)
||++..+.++..+..+|+.|.+. .+.-+|.++.-. ++++++.++.|.. .+++ +++-. +.++.....+.
T Consensus 4 IVi~~g~~~~~~a~~lI~~LR~~-g~~LPIEI~~~~~~dl~~~~~~~l~~-----~q~v~~vd~~~~-~~~~~~~~~~~- 75 (271)
T PF11051_consen 4 IVITAGDKYLWLALRLIRVLRRL-GNTLPIEIIYPGDDDLSKEFCEKLLP-----DQDVWFVDASCV-IDPDYLGKSFS- 75 (271)
T ss_pred EEEEecCccHHHHHHHHHHHHHh-CCCCCEEEEeCCccccCHHHHHHHhh-----hhhhheecceEE-eeccccccccc-
Confidence 78888888999888888888774 444667775544 5666665555544 1111 11111 11111111111
Q ss_pred hhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccC
Q 047424 147 SIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDIT 194 (379)
Q Consensus 147 ~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~d 194 (379)
...|..=.++-++-. .+.||+||+|.|.+.|++.||+.+
T Consensus 76 --------~~~~~~K~lA~l~ss-FeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 76 --------KKGFQNKWLALLFSS-FEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred --------cCCchhhhhhhhhCC-cceEEEEcCCcccccCHHHHhcCc
Confidence 003333334445544 899999999999999999999874
No 25
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=96.58 E-value=0.012 Score=53.75 Aligned_cols=138 Identities=15% Similarity=0.160 Sum_probs=73.3
Q ss_pred hhHHhh-hhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhhhhcCCCCCc
Q 047424 157 NYARNY-LGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPC 235 (379)
Q Consensus 157 ~y~Rl~-lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~~~~~~~~ 235 (379)
...|.. +-++|... --|+|+|+|++..+|..++++. .+..++...+ +.... .. .....
T Consensus 52 ~~~K~~~~~~~L~~G-~~vl~~D~Dvv~~~dp~~~~~~--~~~Di~~~~d-~~~~~------------~~-----~~~~~ 110 (212)
T PF03407_consen 52 TWLKPKVLLDLLELG-YDVLFSDADVVWLRDPLPYFEN--PDADILFSSD-GWDGT------------NS-----DRNGN 110 (212)
T ss_pred HHHHHHHHHHHHHcC-CceEEecCCEEEecCcHHhhcc--CCCceEEecC-CCccc------------ch-----hhcCC
Confidence 344442 34566653 4699999999999999999922 2233444432 21100 00 01233
Q ss_pred cceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccC--------ceecccccccccCCCCCccc-
Q 047424 236 YFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGN--------VEAIDHRWNQHGLGGDNVKG- 306 (379)
Q Consensus 236 YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~--------i~~L~~~wN~~~~~~~~~~~- 306 (379)
.+|+|+|.+.-.. ...+-+.+|++..... -...||.+||.++... +..||..--..+.+ .+..
T Consensus 111 ~~n~G~~~~r~t~----~~~~~~~~w~~~~~~~--~~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~--~f~~~ 182 (212)
T PF03407_consen 111 LVNTGFYYFRPTP----RTIAFLEDWLERMAES--PGCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHG--YFCQS 182 (212)
T ss_pred ccccceEEEecCH----HHHHHHHHHHHHHHhC--CCcchHHHHHHHHHhcccCCcCcEEEEeCHHHeecccc--ceeec
Confidence 5699999996543 1222244555544332 1224899999887653 45566543322211 1111
Q ss_pred -ccccCC-CCCCEEEeccC
Q 047424 307 -SCRSLH-PGPVSLLHWSG 323 (379)
Q Consensus 307 -~~~~l~-~~~~~IIHf~G 323 (379)
...... ..++.++|.++
T Consensus 183 ~~~~~~~~~~~p~~vH~n~ 201 (212)
T PF03407_consen 183 RDWAWVPTKNKPYIVHANC 201 (212)
T ss_pred chhhhhccccccceEEEcC
Confidence 111111 13578999985
No 26
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=95.82 E-value=0.021 Score=57.09 Aligned_cols=158 Identities=18% Similarity=0.334 Sum_probs=84.8
Q ss_pred ccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhhhhcCCCCCccceeeeEEEec
Q 047424 167 LDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDL 246 (379)
Q Consensus 167 Lp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~~~~~~~~YFNSGVmLinL 246 (379)
.|+ ++-+-|||+|++|.+-- ++++++. ... .|..- ..|.+ .++..++-...|+||++|-.
T Consensus 195 ~Pe-aEWiWWLDsDALImNms---felPler--y~~------~NlVi----hg~~~----~l~~~kdW~GLNtGsFLIRN 254 (429)
T PLN03182 195 HPE-VEWIWWMDSDALFTDMT---FEIPLEK--YEG------YNLVI----HGWDE----LVYDQKSWIGLNTGSFLIRN 254 (429)
T ss_pred CCC-ceEEEEecCCceeecCC---CCCCHhH--cCC------cCeee----ccchh----hheeccccCccceeeEEEEc
Confidence 476 99999999999999731 2233321 100 01000 01111 11222344689999999987
Q ss_pred HHHhhhhHHHHHHHHHHH-----------------hccccCCCCCCchHHHHhc------ccCceecccccccccCCC--
Q 047424 247 VRWRKGNYRKRIENWMEI-----------------QRRKRIYDLGSLPPFLLVF------AGNVEAIDHRWNQHGLGG-- 301 (379)
Q Consensus 247 ~kwR~~~~~~~~~~~~~~-----------------~~~~~~~~~gdqd~lN~vf------~g~i~~L~~~wN~~~~~~-- 301 (379)
-.|-.. +.+ .|... .+.+..++-+||.+|-.++ .+.-..|...|-+++...
T Consensus 255 cqWSld-lLD---aWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l~Gyw~~i 330 (429)
T PLN03182 255 CQWSLD-LLD---AWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLHGYWVGL 330 (429)
T ss_pred CHHHHH-HHH---HHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecceeccccHHH
Confidence 666542 111 22222 2234466778998876554 123367888888876421
Q ss_pred -CCcccccccCCC-----CCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCCc
Q 047424 302 -DNVKGSCRSLHP-----GPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS 352 (379)
Q Consensus 302 -~~~~~~~~~l~~-----~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 352 (379)
+.+.+..+..++ .-+.|.||+| .||...... + +.+.=|....+.--+
T Consensus 331 v~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~~~~~-y--~~~~C~~~m~ra~nF 383 (429)
T PLN03182 331 VDRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCGGYGD-Y--PVERCLKQMERAFNF 383 (429)
T ss_pred HHHHHHHHHhcCCCCCCcccceeEeecc-ceecCCCCC-c--CHHHHHHHHHHHhcc
Confidence 111111111122 1258999999 899976542 2 456666665554433
No 27
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=93.45 E-value=0.049 Score=51.29 Aligned_cols=152 Identities=16% Similarity=0.223 Sum_probs=17.3
Q ss_pred hhHHhh-hhhhc---cccCCeEEEEecceEEecchHhHhcc-----CCCC----CeeEeeccccccCcccccccCCCCCh
Q 047424 157 NYARNY-LGDIL---DPCVDRVIYIDSDLVLVDDIHKLWDI-----TLTK----SKIIGAPEYCHANFTKYFTDNFWSDP 223 (379)
Q Consensus 157 ~y~Rl~-lp~lL---p~~~~RVLYLDsDvIV~~DI~eL~~~-----dl~~----~~~~aa~e~~~~~~~~y~~~~~w~~~ 223 (379)
++.|+. |-+.+ |+ ++-|.|||+|++|.+-=-+|-+. .|+. +..+ .+.. +..+... ..++
T Consensus 60 ~W~K~~~lr~~m~~~P~-~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~-~p~~---~~~~~~~---~~~~ 131 (239)
T PF05637_consen 60 SWAKIPALRAAMKKYPE-AEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPI-VPPD---SIIKTYS---VIDG 131 (239)
T ss_dssp HHTHHHHHHHHHHH-TT--SEEEEE-TTEEE-------------------------------------------------
T ss_pred hhHHHHHHHHHHHhCCC-CCEEEEEcCCeEEEeccccccccccccccccccccccccc-cccc---ccccccc---cccc
Confidence 455543 33444 76 89999999999999854444322 1111 0001 1111 0001000 0000
Q ss_pred hhhhhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhc------ccCceeccccc-cc
Q 047424 224 LLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVF------AGNVEAIDHRW-NQ 296 (379)
Q Consensus 224 ~l~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf------~g~i~~L~~~w-N~ 296 (379)
.-...+...+..++|+||+++--..|-.. +.+...+.............++|.+|-.++ .+++..+|.+| |.
T Consensus 132 ~~~~li~t~d~~gLNtGsFliRns~ws~~-fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~ns 210 (239)
T PF05637_consen 132 NDIHLIITQDWNGLNTGSFLIRNSPWSRD-FLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNS 210 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00012234567799999999976666542 222211111111111111235677665443 34566667543 33
Q ss_pred ccCCCCCcccccccCCCCCCEEEeccC
Q 047424 297 HGLGGDNVKGSCRSLHPGPVSLLHWSG 323 (379)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~~~~IIHf~G 323 (379)
...+... ....+++ -|+||+|
T Consensus 211 y~~~~~~-----~~~~~GD-fvvhfaG 231 (239)
T PF05637_consen 211 YPEDECN-----YQYKEGD-FVVHFAG 231 (239)
T ss_dssp ---------------------------
T ss_pred ccccccc-----ccccccc-ccccccc
Confidence 2211111 1223454 7999999
No 28
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=89.39 E-value=4.3 Score=33.77 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=57.7
Q ss_pred EEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhh
Q 047424 73 MTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREAL 152 (379)
Q Consensus 73 ~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~ 152 (379)
.+.+. ...+.-++.|+++... ....++|+.++.+++..+.+++... . ...++++..+.+. +
T Consensus 5 p~~n~--~~~l~~~l~sl~~q~~--~~~eiivvdd~s~d~~~~~~~~~~~-~--~~~i~~i~~~~n~--g---------- 65 (169)
T PF00535_consen 5 PTYNE--AEYLERTLESLLKQTD--PDFEIIVVDDGSTDETEEILEEYAE-S--DPNIRYIRNPENL--G---------- 65 (169)
T ss_dssp EESS---TTTHHHHHHHHHHHSG--CEEEEEEEECS-SSSHHHHHHHHHC-C--STTEEEEEHCCCS--H----------
T ss_pred EeeCC--HHHHHHHHHHHhhccC--CCEEEEEeccccccccccccccccc-c--ccccccccccccc--c----------
Confidence 34444 5566778888888843 5688888888887777777777653 1 2344544433221 1
Q ss_pred cCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhcc
Q 047424 153 ENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWDI 193 (379)
Q Consensus 153 ~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~~ 193 (379)
...++...-+... -+-++++|+|.++..+ |.+|.+.
T Consensus 66 ---~~~~~n~~~~~a~--~~~i~~ld~D~~~~~~~l~~l~~~ 102 (169)
T PF00535_consen 66 ---FSAARNRGIKHAK--GEYILFLDDDDIISPDWLEELVEA 102 (169)
T ss_dssp ---HHHHHHHHHHH----SSEEEEEETTEEE-TTHHHHHHHH
T ss_pred ---ccccccccccccc--eeEEEEeCCCceEcHHHHHHHHHH
Confidence 1122233333333 3699999999999998 7777765
No 29
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=86.22 E-value=0.98 Score=45.25 Aligned_cols=166 Identities=16% Similarity=0.141 Sum_probs=85.4
Q ss_pred hHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCC-CC-eeEeeccccccCcccccc-cCCCCCh--h---hhhhc
Q 047424 158 YARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLT-KS-KIIGAPEYCHANFTKYFT-DNFWSDP--L---LSRVF 229 (379)
Q Consensus 158 y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~-~~-~~~aa~e~~~~~~~~y~~-~~~w~~~--~---l~~~~ 229 (379)
+..+.+-++-+ .++++|+|.|+.+..++...++.... +. .......+-......+-. .-.+.++ . ....+
T Consensus 114 ~~~~~~~~~~~--~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~ 191 (369)
T KOG1950|consen 114 DDKIKIWRLIE--DGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLF 191 (369)
T ss_pred ccceeecceec--cCceEEEecchhhccCccccccccchhcccccceeeecccccceEEeccchhcCChhhhhhhchhhc
Confidence 44444444443 68999999999999999888887543 11 111111100000000000 0001111 0 01111
Q ss_pred C-CCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCceecccccccccCC-CCCc-cc
Q 047424 230 G-SRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLG-GDNV-KG 306 (379)
Q Consensus 230 ~-~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~-~~~~-~~ 306 (379)
. +.....||+|.|++-..-. ....+++......-|.+++|+++|.+|...-...+...|..... ...- ..
T Consensus 192 ~~~~l~~~~n~~~~v~~ps~~-------~~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~ 264 (369)
T KOG1950|consen 192 ATNILPLIFNSGLLVFEPSLC-------NYKDLMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKN 264 (369)
T ss_pred cCCCccceeccCccccCCCcc-------chhhHHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCcccc
Confidence 1 2234569999999844321 12224444444455788899999999986666888888875321 1110 00
Q ss_pred ccccCCCCCCEEEeccCCCCCCCcCC
Q 047424 307 SCRSLHPGPVSLLHWSGKGKPWVRLD 332 (379)
Q Consensus 307 ~~~~l~~~~~~IIHf~G~~KPW~~~~ 332 (379)
............+||.|..|||....
T Consensus 265 ~l~~~~~~~~~~~~y~~~~~p~~~~~ 290 (369)
T KOG1950|consen 265 DLSRASSVLRYALHYLGANKPELCYR 290 (369)
T ss_pred chhhcccccchhhhccccCCCCcccc
Confidence 11111112234569999878887654
No 30
>PLN03181 glycosyltransferase; Provisional
Probab=81.38 E-value=5.7 Score=40.27 Aligned_cols=35 Identities=20% Similarity=0.195 Sum_probs=23.6
Q ss_pred CEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCCc
Q 047424 316 VSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS 352 (379)
Q Consensus 316 ~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 352 (379)
+.|-||+| .||....... ..+.+.=|....+.--+
T Consensus 386 PfvTHF~G-C~pC~g~~n~-~Y~~~~C~~~m~ra~nF 420 (453)
T PLN03181 386 PFVTHFTG-CQPCSGDHNK-MYSGDSCWNGMRRALNF 420 (453)
T ss_pred cccccccC-ccccCCCCCC-CCCHHHHHHHHHHHhcc
Confidence 68999999 8999875421 13566777766655444
No 31
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=80.81 E-value=17 Score=29.99 Aligned_cols=92 Identities=15% Similarity=0.055 Sum_probs=51.7
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhHH
Q 047424 81 RGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYAR 160 (379)
Q Consensus 81 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~R 160 (379)
..+..++.|+++... ....++|+.++.+++..+.+.+.... ++. .+.+. ...+. .++ . .+|
T Consensus 10 ~~l~~~l~sl~~q~~--~~~~iivvdd~s~d~t~~~~~~~~~~-~~~-~~~~~-~~~~~-~g~-~------------~~~ 70 (180)
T cd06423 10 AVIERTIESLLALDY--PKLEVIVVDDGSTDDTLEILEELAAL-YIR-RVLVV-RDKEN-GGK-A------------GAL 70 (180)
T ss_pred HHHHHHHHHHHhCCC--CceEEEEEeCCCccchHHHHHHHhcc-ccc-eEEEE-Eeccc-CCc-h------------HHH
Confidence 677788999998765 45788888888777666666554322 111 11211 11111 111 1 111
Q ss_pred hhhhhhccccCCeEEEEecceEEecc-hHhHhcc
Q 047424 161 NYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWDI 193 (379)
Q Consensus 161 l~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~~ 193 (379)
...-+... .+-++.+|+|.++..+ |.+++..
T Consensus 71 n~~~~~~~--~~~i~~~D~D~~~~~~~l~~~~~~ 102 (180)
T cd06423 71 NAGLRHAK--GDIVVVLDADTILEPDALKRLVVP 102 (180)
T ss_pred HHHHHhcC--CCEEEEECCCCCcChHHHHHHHHH
Confidence 11111122 5899999999999887 5555333
No 32
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=80.12 E-value=28 Score=31.76 Aligned_cols=103 Identities=14% Similarity=0.078 Sum_probs=59.4
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.+-|++.+=+ -...+..++.|+++....+..+.+.|+.++.++...+.++++... ++.++..+.. .++
T Consensus 30 ~isVvip~~n-~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~-----~v~~i~~~~~--~g~---- 97 (251)
T cd06439 30 TVTIIIPAYN-EEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK-----GVKLLRFPER--RGK---- 97 (251)
T ss_pred EEEEEEecCC-cHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC-----cEEEEEcCCC--CCh----
Confidence 4666665543 246678889999886543334778778877776666656554321 2333322211 111
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhcc
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWDI 193 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~~ 193 (379)
..++...-+... -+-++++|+|+++..+ +.++++.
T Consensus 98 ---------~~a~n~gi~~a~--~d~i~~lD~D~~~~~~~l~~l~~~ 133 (251)
T cd06439 98 ---------AAALNRALALAT--GEIVVFTDANALLDPDALRLLVRH 133 (251)
T ss_pred ---------HHHHHHHHHHcC--CCEEEEEccccCcCHHHHHHHHHH
Confidence 112222112222 3789999999999876 6666654
No 33
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=76.97 E-value=1.3 Score=44.25 Aligned_cols=31 Identities=19% Similarity=0.347 Sum_probs=21.7
Q ss_pred chhHHhhhhhhccccCCeEEEEecceEEecchHhHh
Q 047424 156 LNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLW 191 (379)
Q Consensus 156 ~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~ 191 (379)
....|+.+=--.- =||||+|+||++++.+|=
T Consensus 228 Sdl~RLA~LyKYG-----GvYLDTDvIvLksl~~l~ 258 (409)
T KOG1928|consen 228 SDLSRLALLYKYG-----GVYLDTDVIVLKSLSNLR 258 (409)
T ss_pred HHHHHHHHHHHhC-----CEEeeccEEEeccccccc
Confidence 3455665432222 289999999999999884
No 34
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=76.56 E-value=24 Score=31.15 Aligned_cols=105 Identities=15% Similarity=0.155 Sum_probs=58.9
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhh
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSI 148 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i 148 (379)
+-|++.+-+ ....+.-+|.|+++..- .++.+.|+.++.+++..+.++++.. .++.++++++..+.+ . +. ...
T Consensus 3 vsviip~~n-~~~~l~~~L~sl~~q~~--~~~eiivVdd~s~d~t~~~~~~~~~-~~~~~~~~~~~~~~~-~-g~-~~~- 74 (196)
T cd02520 3 VSILKPLCG-VDPNLYENLESFFQQDY--PKYEILFCVQDEDDPAIPVVRKLIA-KYPNVDARLLIGGEK-V-GI-NPK- 74 (196)
T ss_pred eEEEEecCC-CCccHHHHHHHHHhccC--CCeEEEEEeCCCcchHHHHHHHHHH-HCCCCcEEEEecCCc-C-CC-CHh-
Confidence 456665553 34457788999988653 3488888888887777777777654 356555554433321 1 10 000
Q ss_pred HhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecch-HhHh
Q 047424 149 REALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDI-HKLW 191 (379)
Q Consensus 149 ~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI-~eL~ 191 (379)
.......-+. .. .+=++++|+|+++..+- .++.
T Consensus 75 --------~~~~n~g~~~-a~-~d~i~~~D~D~~~~~~~l~~l~ 108 (196)
T cd02520 75 --------VNNLIKGYEE-AR-YDILVISDSDISVPPDYLRRMV 108 (196)
T ss_pred --------HHHHHHHHHh-CC-CCEEEEECCCceEChhHHHHHH
Confidence 0000000011 22 68999999999875543 4444
No 35
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=75.66 E-value=21 Score=34.08 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=54.9
Q ss_pred EEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHH-HhcCCceeEEEEEechhhHHhhhhhhhH
Q 047424 71 VAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLV-RSTFPSLNFKVYIFREDTVINLISSSIR 149 (379)
Q Consensus 71 I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~-~~~~~~l~~~~~~~d~~~~~~~is~~i~ 149 (379)
|++.+=+.-...+..+|.||+.++.....+.+.|+.++.++.....+.+.. ....+. +++...+.. .+. +
T Consensus 2 IIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~--v~vi~~~~n--~G~-~---- 72 (299)
T cd02510 2 VIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPK--VKVLRLKKR--EGL-I---- 72 (299)
T ss_pred EEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCc--EEEEEcCCC--CCH-H----
Confidence 333333223377788899999877533335777777777666555554422 222333 343332211 111 1
Q ss_pred hhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhc
Q 047424 150 EALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWD 192 (379)
Q Consensus 150 ~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~ 192 (379)
-+|......-. -+-|++||+|+++..+ |.+|.+
T Consensus 73 --------~a~N~g~~~A~--gd~i~fLD~D~~~~~~wL~~ll~ 106 (299)
T cd02510 73 --------RARIAGARAAT--GDVLVFLDSHCEVNVGWLEPLLA 106 (299)
T ss_pred --------HHHHHHHHHcc--CCEEEEEeCCcccCccHHHHHHH
Confidence 11222112222 4899999999999654 455554
No 36
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=73.89 E-value=34 Score=28.37 Aligned_cols=88 Identities=19% Similarity=0.210 Sum_probs=50.2
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhH
Q 047424 80 LRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYA 159 (379)
Q Consensus 80 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~ 159 (379)
...+.-++.|+.++.. ....+.|+.++..++..+.+++. .+ ++.++..+.+ .+. ..+
T Consensus 9 ~~~l~~~l~sl~~~~~--~~~~iiivdd~s~~~~~~~~~~~----~~--~~~~~~~~~~--~g~-------------~~a 65 (166)
T cd04186 9 LEYLKACLDSLLAQTY--PDFEVIVVDNASTDGSVELLREL----FP--EVRLIRNGEN--LGF-------------GAG 65 (166)
T ss_pred HHHHHHHHHHHHhccC--CCeEEEEEECCCCchHHHHHHHh----CC--CeEEEecCCC--cCh-------------HHH
Confidence 5667788999998765 34777777777666544444432 22 3333322211 111 111
Q ss_pred HhhhhhhccccCCeEEEEecceEEecc-hHhHhc
Q 047424 160 RNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWD 192 (379)
Q Consensus 160 Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~ 192 (379)
|...-+.. . .+-++++|+|.++..+ +..+.+
T Consensus 66 ~n~~~~~~-~-~~~i~~~D~D~~~~~~~l~~~~~ 97 (166)
T cd04186 66 NNQGIREA-K-GDYVLLLNPDTVVEPGALLELLD 97 (166)
T ss_pred hhHHHhhC-C-CCEEEEECCCcEECccHHHHHHH
Confidence 12111222 2 6899999999998876 445554
No 37
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=72.82 E-value=46 Score=26.50 Aligned_cols=89 Identities=16% Similarity=0.102 Sum_probs=50.3
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhH
Q 047424 80 LRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYA 159 (379)
Q Consensus 80 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~ 159 (379)
...+..++.|+.+... ....++|+.++.+++..+.+.+.... . .....+. ..... + ...+
T Consensus 9 ~~~l~~~l~s~~~~~~--~~~~i~i~~~~~~~~~~~~~~~~~~~-~--~~~~~~~-~~~~~-g-------------~~~~ 68 (156)
T cd00761 9 EPYLERCLESLLAQTY--PNFEVIVVDDGSTDGTLEILEEYAKK-D--PRVIRVI-NEENQ-G-------------LAAA 68 (156)
T ss_pred HHHHHHHHHHHHhCCc--cceEEEEEeCCCCccHHHHHHHHHhc-C--CCeEEEE-ecCCC-C-------------hHHH
Confidence 5667788999998764 34778888888777666666555432 0 1111111 11100 0 0111
Q ss_pred HhhhhhhccccCCeEEEEecceEEecchHhH
Q 047424 160 RNYLGDILDPCVDRVIYIDSDLVLVDDIHKL 190 (379)
Q Consensus 160 Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL 190 (379)
+...-+.. . .+.++++|+|.++..+.-+-
T Consensus 69 ~~~~~~~~-~-~d~v~~~d~D~~~~~~~~~~ 97 (156)
T cd00761 69 RNAGLKAA-R-GEYILFLDADDLLLPDWLER 97 (156)
T ss_pred HHHHHHHh-c-CCEEEEECCCCccCccHHHH
Confidence 11111111 2 69999999999998875443
No 38
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=72.24 E-value=38 Score=32.52 Aligned_cols=198 Identities=12% Similarity=0.121 Sum_probs=104.4
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
+|-|...+=+.|....--.+.|.-+|=-...+++++|++|..+.- ... +..|.-++++..+..+ .+
T Consensus 35 tIgl~vfatGkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~~-----p~v--~lg~~r~~~V~~v~~~--~~----- 100 (271)
T cd02515 35 TIGLTVFAVGKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAAV-----PEV--ELGPGRRLTVLKIAEE--SR----- 100 (271)
T ss_pred EEEEEEEEeccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCcccC-----ccc--ccCCCceeEEEEeccc--cC-----
Confidence 566666666789998888899998887666789999999864421 110 1233345666555322 11
Q ss_pred hHhhhcCcchhHHhh-----hhhhccccCCeEEEEecceEEecchH-hHhccCCCCCeeEeeccc--cccCcccccccCC
Q 047424 148 IREALENPLNYARNY-----LGDILDPCVDRVIYIDSDLVLVDDIH-KLWDITLTKSKIIGAPEY--CHANFTKYFTDNF 219 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~-----lp~lLp~~~~RVLYLDsDvIV~~DI~-eL~~~dl~~~~~~aa~e~--~~~~~~~y~~~~~ 219 (379)
++-.++.|+- +.+..-.++|-+.++|+|+++.+++. |. |+ ..+|+... -..+ ..-|+.+
T Consensus 101 -----W~~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~----Lg--~lva~lHp~~y~~~-~~~fpYE- 167 (271)
T cd02515 101 -----WQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVET----LG--DSVAQLHPWWYGKP-RKQFPYE- 167 (271)
T ss_pred -----CcHHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHH----hh--hhheecChhhhcCC-CCCCCCc-
Confidence 1112333332 22333234999999999999999997 33 22 24555221 0000 0111111
Q ss_pred CCChhhhhhcC--CCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccc---cCCCCCCchHHHHhcc-cC-ceeccc
Q 047424 220 WSDPLLSRVFG--SRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRK---RIYDLGSLPPFLLVFA-GN-VEAIDH 292 (379)
Q Consensus 220 w~~~~l~~~~~--~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~---~~~~~gdqd~lN~vf~-g~-i~~L~~ 292 (379)
++|. +..+. +.+.-|+-+||.==-.+...+ +++.|.+-+..-.+. -.|+ |.--||..|- .+ .+.|++
T Consensus 168 -Rrp~-S~AyIp~~eGdfYy~Ga~~GG~~~~vl~--l~~~c~~~i~~D~~n~I~A~wH--DESHLNkYf~~~Kp~KiLSP 241 (271)
T cd02515 168 -RRPS-SAAYIPEGEGDFYYHGAVFGGSVEEVYR--LTRACHEGILADKANGIEARWH--DESHLNKYFLLHKPTKVLSP 241 (271)
T ss_pred -CCCC-ccccccCCCCCeEEeeeecCccHHHHHH--HHHHHHHHHHHHHhCCceEEee--cHhHhHHHHhhCCCCeecCh
Confidence 1111 11121 344556666655322332222 334444333332221 2454 3346786553 33 799999
Q ss_pred cccccc
Q 047424 293 RWNQHG 298 (379)
Q Consensus 293 ~wN~~~ 298 (379)
.|+...
T Consensus 242 eY~w~e 247 (271)
T cd02515 242 EYLWDD 247 (271)
T ss_pred hhcCCc
Confidence 998864
No 39
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=71.06 E-value=32 Score=30.81 Aligned_cols=100 Identities=13% Similarity=0.055 Sum_probs=51.3
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhh
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSI 148 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i 148 (379)
|-|++.+=+.-...+..++.|++...-.++.+.+.|+.++.+++..+.++++.. ...+.++..+.+. +.....+
T Consensus 3 vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~ 76 (234)
T cd06421 3 VDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGV----EYGYRYLTRPDNR--HAKAGNL 76 (234)
T ss_pred eEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhc----ccCceEEEeCCCC--CCcHHHH
Confidence 455555444333456678999997654333477877777766554444444321 1122332222110 1000001
Q ss_pred HhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchH
Q 047424 149 REALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIH 188 (379)
Q Consensus 149 ~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~ 188 (379)
+ ..-+.. ..+-++++|+|.++..|--
T Consensus 77 n------------~~~~~a--~~d~i~~lD~D~~~~~~~l 102 (234)
T cd06421 77 N------------NALAHT--TGDFVAILDADHVPTPDFL 102 (234)
T ss_pred H------------HHHHhC--CCCEEEEEccccCcCccHH
Confidence 1 111111 2699999999999976643
No 40
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=70.97 E-value=44 Score=29.13 Aligned_cols=102 Identities=15% Similarity=0.080 Sum_probs=54.6
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhh
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSI 148 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i 148 (379)
+-|++.+-+.-+..+..++.||+..+. ..+.+.|+.++.++...+.+.+......+. +.++....+ .+ .
T Consensus 3 vsiii~~~n~~~~~l~~~l~sl~~q~~--~~~eiivvd~gs~d~~~~~~~~~~~~~~~~--~~~~~~~~~--~g-~---- 71 (202)
T cd04184 3 ISIVMPVYNTPEKYLREAIESVRAQTY--PNWELCIADDASTDPEVKRVLKKYAAQDPR--IKVVFREEN--GG-I---- 71 (202)
T ss_pred EEEEEecccCcHHHHHHHHHHHHhCcC--CCeEEEEEeCCCCChHHHHHHHHHHhcCCC--EEEEEcccC--CC-H----
Confidence 456666554446788899999998764 346777777666554343333322222232 333222111 01 1
Q ss_pred HhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHh
Q 047424 149 REALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLW 191 (379)
Q Consensus 149 ~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~ 191 (379)
..++...-+... -+=++.+|+|.++..| +..+.
T Consensus 72 --------~~a~n~g~~~a~--~d~i~~ld~D~~~~~~~l~~~~ 105 (202)
T cd04184 72 --------SAATNSALELAT--GEFVALLDHDDELAPHALYEVV 105 (202)
T ss_pred --------HHHHHHHHHhhc--CCEEEEECCCCcCChHHHHHHH
Confidence 112222222222 4889999999999776 44444
No 41
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=70.89 E-value=29 Score=30.78 Aligned_cols=96 Identities=10% Similarity=0.055 Sum_probs=50.7
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhH
Q 047424 80 LRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYA 159 (379)
Q Consensus 80 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~ 159 (379)
...+.-+|.||+..+..+..+.++|+.++.++...+.++ .. ...+..++.+...+...-.++ ..+
T Consensus 9 ~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~-~~-~~~~~~~v~~~~~~~~~~~g~-------------~~a 73 (229)
T cd04192 9 AENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE-FA-AAKPNFQLKILNNSRVSISGK-------------KNA 73 (229)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH-HH-HhCCCcceEEeeccCcccchh-------------HHH
Confidence 456778899998877543447888787776665555554 11 122333343332221000010 111
Q ss_pred HhhhhhhccccCCeEEEEecceEEecchH-hHhc
Q 047424 160 RNYLGDILDPCVDRVIYIDSDLVLVDDIH-KLWD 192 (379)
Q Consensus 160 Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~-eL~~ 192 (379)
+....+.. . .+-|+++|+|.++..|.- .+.+
T Consensus 74 ~n~g~~~~-~-~d~i~~~D~D~~~~~~~l~~l~~ 105 (229)
T cd04192 74 LTTAIKAA-K-GDWIVTTDADCVVPSNWLLTFVA 105 (229)
T ss_pred HHHHHHHh-c-CCEEEEECCCcccCHHHHHHHHH
Confidence 11111111 2 689999999999876543 3443
No 42
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=70.47 E-value=57 Score=28.49 Aligned_cols=92 Identities=12% Similarity=0.152 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhHH
Q 047424 81 RGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYAR 160 (379)
Q Consensus 81 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~R 160 (379)
..+.-++.|++.... ..+.++|+.++.+++..+.++++... .| ..+.++..+.+ .+. .... +..
T Consensus 11 ~~l~~~l~sl~~q~~--~~~eiiVvddgS~d~t~~~~~~~~~~-~~-~~~~~~~~~~~--~G~-~~~~--------n~g- 74 (214)
T cd04196 11 KYLREQLDSILAQTY--KNDELIISDDGSTDGTVEIIKEYIDK-DP-FIIILIRNGKN--LGV-ARNF--------ESL- 74 (214)
T ss_pred HHHHHHHHHHHhCcC--CCeEEEEEeCCCCCCcHHHHHHHHhc-CC-ceEEEEeCCCC--ccH-HHHH--------HHH-
Confidence 566788999998764 35888888888777766777766433 33 12222222111 011 0001 011
Q ss_pred hhhhhhccccCCeEEEEecceEEecc-hHhHhcc
Q 047424 161 NYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWDI 193 (379)
Q Consensus 161 l~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~~ 193 (379)
+ . .. ..+-|++||+|.+...+ |..+.+.
T Consensus 75 --~-~-~~-~g~~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 75 --L-Q-AA-DGDYVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred --H-H-hC-CCCEEEEECCCcccChhHHHHHHHH
Confidence 1 1 12 26899999999888776 7788775
No 43
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=69.31 E-value=38 Score=34.61 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=60.3
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.+.|++.+=+. ...+..++.|+.+.+-.+..+.+.|+.++.+++..+.+++.. +.++.+.+ ...+.+ .++ +..
T Consensus 50 ~vsVIIP~yNe-~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~-~~~~~v~v--~~~~~~--~Gk-a~A 122 (439)
T TIGR03111 50 DITIIIPVYNS-EDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQ-NEFPGLSL--RYMNSD--QGK-AKA 122 (439)
T ss_pred CEEEEEEeCCC-hHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHH-HhCCCeEE--EEeCCC--CCH-HHH
Confidence 46677665433 367788999998766544557888888887776666666543 34554433 333332 121 111
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLW 191 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~ 191 (379)
. -..-+... -+-|+.+|+|.++..| +.++.
T Consensus 123 l------------N~gl~~s~--g~~v~~~DaD~~~~~d~L~~l~ 153 (439)
T TIGR03111 123 L------------NAAIYNSI--GKYIIHIDSDGKLHKDAIKNMV 153 (439)
T ss_pred H------------HHHHHHcc--CCEEEEECCCCCcChHHHHHHH
Confidence 1 11111122 3679999999999776 44554
No 44
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=68.60 E-value=28 Score=35.72 Aligned_cols=117 Identities=11% Similarity=0.082 Sum_probs=54.3
Q ss_pred ceeEE-EEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhh
Q 047424 68 LVHVA-MTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISS 146 (379)
Q Consensus 68 ~i~I~-~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~ 146 (379)
.++|+ |+|+. ..++.-+|.||+++.+..+...+.|--|+..++.. +.+.+....+.. +...+.+.+.-. +.
T Consensus 94 ~~pVlV~AcNR--p~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~----~vi~~y~~~v~~-i~~~~~~~i~~~-~~ 165 (434)
T PF03071_consen 94 VIPVLVFACNR--PDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVA----EVIKSYGDQVTY-IQHPDFSPITIP-PK 165 (434)
T ss_dssp ---EEEEESS---TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHH----HHHHGGGGGSEE-EE-S--S------TT
T ss_pred cceEEEEecCC--cHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHH----HHHHHhhhhhee-eecCCcCCceeC-cc
Confidence 44544 66664 55567789999998654456666666666554322 333332122221 222221111100 00
Q ss_pred hh-HhhhcCcchhHHhhhhhhccc-cCCeEEEEecceEEecchHhHhc
Q 047424 147 SI-REALENPLNYARNYLGDILDP-CVDRVIYIDSDLVLVDDIHKLWD 192 (379)
Q Consensus 147 ~i-~~~~~s~~~y~Rl~lp~lLp~-~~~RVLYLDsDvIV~~DI~eL~~ 192 (379)
.. -.++...+..+|.-|-.++.. .+++||.|.-|+.|--|.=+-|+
T Consensus 166 ~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~ 213 (434)
T PF03071_consen 166 EKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFS 213 (434)
T ss_dssp -GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHH
Confidence 00 001112245566667777742 38999999999999999876554
No 45
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=61.80 E-value=8 Score=37.78 Aligned_cols=47 Identities=21% Similarity=0.207 Sum_probs=37.5
Q ss_pred hhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCC-CCCeeEeec
Q 047424 157 NYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITL-TKSKIIGAP 204 (379)
Q Consensus 157 ~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl-~~~~~~aa~ 204 (379)
-+.|++...+||+ ++--||+|+-+.+++|+..|.+.-+ .++.-+|+.
T Consensus 140 r~~K~lpHrlfp~-y~ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~ 187 (305)
T PF04765_consen 140 RIPKLLPHRLFPN-YDYSIWIDGKIQLIVDPLLLIERFLWRKNADIAIS 187 (305)
T ss_pred cccceeccccCCC-CceEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEe
Confidence 4778889999998 9999999999999999988876544 224455664
No 46
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=61.44 E-value=25 Score=30.48 Aligned_cols=69 Identities=13% Similarity=0.110 Sum_probs=48.1
Q ss_pred CCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHh
Q 047424 65 DPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVIN 142 (379)
Q Consensus 65 ~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~ 142 (379)
+.+.+-+|.++.++....+.-++.||.++-+. .. +.+..-|++++.++.|++ .+++ +++..||-+.+.+
T Consensus 58 n~~~vvfVSa~S~~h~~~~~~~i~si~~~~P~-~k--~ilY~LgL~~~~i~~L~~----~~~n--~evr~Fn~s~YP~ 126 (142)
T PF07801_consen 58 NSSDVVFVSATSDNHFNESMKSISSIRKFYPN-HK--IILYDLGLSEEQIKKLKK----NFCN--VEVRKFNFSKYPK 126 (142)
T ss_pred cCCccEEEEEecchHHHHHHHHHHHHHHHCCC-Cc--EEEEeCCCCHHHHHHHHh----cCCc--eEEEECCCccCcH
Confidence 34466788888889999999999999999864 33 345566999877666654 2344 4556777554433
No 47
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=61.28 E-value=50 Score=30.18 Aligned_cols=51 Identities=12% Similarity=-0.016 Sum_probs=33.3
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHH
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQL 120 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~ 120 (379)
+-|++.+-+. -..+.-++.|+++..-.+..+.+.|+.++.+++..+.+++.
T Consensus 3 vsIiIp~~Ne-~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~ 53 (241)
T cd06427 3 YTILVPLYKE-AEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARAL 53 (241)
T ss_pred EEEEEecCCc-HHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHh
Confidence 5566665433 35678899999875533345778777777776666655553
No 48
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=61.06 E-value=78 Score=31.39 Aligned_cols=203 Identities=11% Similarity=0.149 Sum_probs=96.2
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
+|-+++.+=+.|+..+.-.+.|.-+|=-...++++||++|..+. +-.+ ...+.-++++..+... ......+
T Consensus 100 tIGL~vfA~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~-----vP~i--~l~~~r~~~V~~v~~~--~~Wqd~s 170 (337)
T PF03414_consen 100 TIGLTVFATGKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSK-----VPRI--ELGPGRRLKVFEVQEE--KRWQDIS 170 (337)
T ss_dssp EEEEEEEE-CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGG-----S--------TTEEEEEEE-SGG--SSHHHHH
T ss_pred eEEEEEEecccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhh-----CCcc--ccCCCceeEEEEeccc--CCCccch
Confidence 45565555678999999999999998766678999999987542 1111 1123345666655321 1111111
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccc--cccCcccccccCCCCChhh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEY--CHANFTKYFTDNFWSDPLL 225 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~--~~~~~~~y~~~~~w~~~~l 225 (379)
+++ -.++.+.-...++.+ +|-+..+|+|+++.+++.. + .|+ ..+|+... -..+ .+-|+.+. +| .
T Consensus 171 m~R----m~~i~~~i~~~~~~E-vDYLFc~dvd~~F~~~vGv--E-~Lg--~lva~LHp~~y~~~-~~~FpYER--rp-~ 236 (337)
T PF03414_consen 171 MMR----MEMISEHIEQHIQHE-VDYLFCMDVDMVFQDHVGV--E-ILG--DLVATLHPWFYFKP-RESFPYER--RP-K 236 (337)
T ss_dssp HHH----HHHHHHHHHHCHHHH--SEEEEEESSEEE-S-B-G--G-G-S--SEEEEESTTTTTST-GGGS--B---ST-T
T ss_pred hHH----HHHHHHHHHHHHhhc-CCEEEEEecceEEecccCH--H-HHH--HHHHHhCHHHHCCC-hhhCcccc--Cc-c
Confidence 110 012222222334555 9999999999999999873 1 133 35665331 1111 11122111 11 1
Q ss_pred hhhcC--CCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccc---cCCCCCCchHHHHhc--ccCceecccccccc
Q 047424 226 SRVFG--SRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRK---RIYDLGSLPPFLLVF--AGNVEAIDHRWNQH 297 (379)
Q Consensus 226 ~~~~~--~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~---~~~~~gdqd~lN~vf--~g~i~~L~~~wN~~ 297 (379)
+..+. +.+..|+-+|+.==-.....+ +++.|.+-+..-... ..|+ |.--||-.| ....+.|+++|+..
T Consensus 237 S~AyIp~~eGDfYY~ga~fGGt~~~vl~--Lt~~c~~~i~~D~~n~I~A~Wh--DESHLNKYfl~~KPtKvLSPEY~Wd 311 (337)
T PF03414_consen 237 SQAYIPYGEGDFYYHGAFFGGTVEEVLR--LTEACHQGIMQDKANGIEALWH--DESHLNKYFLYHKPTKVLSPEYCWD 311 (337)
T ss_dssp STTB--TT--S--EECCEEEECHHHHHH--HHHHHHHHHHHHHHTT---TTC--HHHHHHHHHHHS--SEEE-GGGSBS
T ss_pred ccccccCCCCCeEEeceecCCcHHHHHH--HHHHHHHHHHhhhhcCceEecc--chhhhHHHHhhCCCceecCHHHccC
Confidence 11221 334567777765543333332 445554444432221 3454 345688754 44578999999875
No 49
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=60.97 E-value=19 Score=33.33 Aligned_cols=22 Identities=23% Similarity=0.446 Sum_probs=18.5
Q ss_pred CCeEEEEecceEEecc-hHhHhc
Q 047424 171 VDRVIYIDSDLVLVDD-IHKLWD 192 (379)
Q Consensus 171 ~~RVLYLDsDvIV~~D-I~eL~~ 192 (379)
.+-|+.+|+|+++..| |.++..
T Consensus 74 ~e~i~~~DaD~~~~~~~l~~l~~ 96 (244)
T cd04190 74 PEFILLVDADTKFDPDSIVQLYK 96 (244)
T ss_pred CCEEEEECCCCcCCHhHHHHHHH
Confidence 6899999999999888 566654
No 50
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=59.86 E-value=4.8 Score=32.38 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=24.4
Q ss_pred chhHHhhhhhhccccCCeEEEEecceEEecch-HhHh
Q 047424 156 LNYARNYLGDILDPCVDRVIYIDSDLVLVDDI-HKLW 191 (379)
Q Consensus 156 ~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI-~eL~ 191 (379)
+-++|+.+--..-. ||+|.|+++++++ +++-
T Consensus 66 sD~~R~~~L~~~GG-----iY~D~D~~~~rpl~~~~~ 97 (103)
T PF04488_consen 66 SDLLRYLVLYKYGG-----IYLDLDVICLRPLDDPWL 97 (103)
T ss_pred HHHHHHHHHHHcCc-----EEEeCccccCcchhhhhh
Confidence 56888887554544 8999999999999 6664
No 51
>PRK11204 N-glycosyltransferase; Provisional
Probab=59.77 E-value=92 Score=31.21 Aligned_cols=102 Identities=16% Similarity=0.166 Sum_probs=59.0
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.+-|++.+=+. ...+..++.|+++..- .++.+.|+.|+.+++..+.+++... .++++ ++....++ .++ ...
T Consensus 55 ~vsViIp~yne-~~~i~~~l~sl~~q~y--p~~eiiVvdD~s~d~t~~~l~~~~~-~~~~v--~~i~~~~n--~Gk-a~a 125 (420)
T PRK11204 55 GVSILVPCYNE-GENVEETISHLLALRY--PNYEVIAINDGSSDNTGEILDRLAA-QIPRL--RVIHLAEN--QGK-ANA 125 (420)
T ss_pred CEEEEEecCCC-HHHHHHHHHHHHhCCC--CCeEEEEEECCCCccHHHHHHHHHH-hCCcE--EEEEcCCC--CCH-HHH
Confidence 56666654433 3557788999887653 2578888888887777777766543 34433 33322211 111 111
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhc
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWD 192 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~ 192 (379)
.+.+. +. .. .|-++.+|+|.++..| +.++.+
T Consensus 126 ln~g~------------~~-a~-~d~i~~lDaD~~~~~d~L~~l~~ 157 (420)
T PRK11204 126 LNTGA------------AA-AR-SEYLVCIDGDALLDPDAAAYMVE 157 (420)
T ss_pred HHHHH------------HH-cC-CCEEEEECCCCCCChhHHHHHHH
Confidence 11110 11 12 6899999999999887 445543
No 52
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=58.63 E-value=33 Score=30.73 Aligned_cols=103 Identities=17% Similarity=0.235 Sum_probs=49.4
Q ss_pred eeEEEEe-CCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhh-HHhhhhh
Q 047424 69 VHVAMTL-DSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDT-VINLISS 146 (379)
Q Consensus 69 i~I~~~~-D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~-~~~~is~ 146 (379)
|-|++.+ ++ -..+.-++.|+++... .++.++|+.++.+++..+.++++.. ..|...+++..-..+. ..++ ..
T Consensus 3 v~Vvip~~~~--~~~l~~~l~sl~~~~~--~~~~v~vvd~~~~~~~~~~~~~~~~-~~~~~~v~vi~~~~~~g~~~k-~~ 76 (228)
T PF13641_consen 3 VSVVIPAYNE--DDVLRRCLESLLAQDY--PRLEVVVVDDGSDDETAEILRALAA-RYPRVRVRVIRRPRNPGPGGK-AR 76 (228)
T ss_dssp EEEE--BSS---HHHHHHHHHHHTTSHH--HTEEEEEEEE-SSS-GCTTHHHHHH-TTGG-GEEEEE----HHHHHH-HH
T ss_pred EEEEEEecCC--HHHHHHHHHHHHcCCC--CCeEEEEEECCCChHHHHHHHHHHH-HcCCCceEEeecCCCCCcchH-HH
Confidence 4555554 33 3356678899986433 3488888887776665566766553 3555555544322111 0001 01
Q ss_pred hhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHh
Q 047424 147 SIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLW 191 (379)
Q Consensus 147 ~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~ 191 (379)
.+. ..+. ... .+-|+.+|+|+++-.| |.++.
T Consensus 77 a~n-----------~~~~-~~~--~d~i~~lD~D~~~~p~~l~~~~ 108 (228)
T PF13641_consen 77 ALN-----------EALA-AAR--GDYILFLDDDTVLDPDWLERLL 108 (228)
T ss_dssp HHH-----------HHHH-H-----SEEEEE-SSEEE-CHHHHHHH
T ss_pred HHH-----------HHHH-hcC--CCEEEEECCCcEECHHHHHHHH
Confidence 111 0111 112 6899999999999665 34433
No 53
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=58.52 E-value=1.3e+02 Score=26.75 Aligned_cols=99 Identities=17% Similarity=0.157 Sum_probs=54.1
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhh
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSI 148 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i 148 (379)
|-|++.+=++-...+..++.|+.+.+ +..+.|+.++.+++..+.+.+.. ..+ .+.+. .... .++. ..+
T Consensus 2 isVvIp~~ne~~~~l~~~l~sl~~q~----~~eiivvdd~s~d~~~~~l~~~~--~~~--~~~v~--~~~~-~g~~-~a~ 69 (235)
T cd06434 2 VTVIIPVYDEDPDVFRECLRSILRQK----PLEIIVVTDGDDEPYLSILSQTV--KYG--GIFVI--TVPH-PGKR-RAL 69 (235)
T ss_pred eEEEEeecCCChHHHHHHHHHHHhCC----CCEEEEEeCCCChHHHHHHHhhc--cCC--cEEEE--ecCC-CChH-HHH
Confidence 34554444333467788899999876 36777788777765555443321 122 22222 1111 1111 111
Q ss_pred HhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhcc
Q 047424 149 REALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWDI 193 (379)
Q Consensus 149 ~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~~ 193 (379)
+. -+ +.. . .+-|+++|+|+++..| |.++.+.
T Consensus 70 n~-----------g~-~~a-~-~d~v~~lD~D~~~~~~~l~~l~~~ 101 (235)
T cd06434 70 AE-----------GI-RHV-T-TDIVVLLDSDTVWPPNALPEMLKP 101 (235)
T ss_pred HH-----------HH-HHh-C-CCEEEEECCCceeChhHHHHHHHh
Confidence 10 11 111 2 6999999999999998 5666644
No 54
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=57.93 E-value=92 Score=27.75 Aligned_cols=99 Identities=12% Similarity=0.125 Sum_probs=55.2
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhH
Q 047424 80 LRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYA 159 (379)
Q Consensus 80 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~ 159 (379)
...+..++.||+..+-. ..+.+.|+.++.++...+.+++...+ .+..++.+...... ... . .-..++
T Consensus 9 ~~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~~~~~-~~~~~~~~~~~~~~-~~~--~--------~G~~~a 75 (219)
T cd06913 9 EQWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEKWRKK-LEDSGVIVLVGSHN-SPS--P--------KGVGYA 75 (219)
T ss_pred HHHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHHHHHh-CcccCeEEEEeccc-CCC--C--------ccHHHH
Confidence 46777889999886542 35788888887766666666665432 23223333222110 000 0 012344
Q ss_pred HhhhhhhccccCCeEEEEecceEEecc-hHhHhcc
Q 047424 160 RNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWDI 193 (379)
Q Consensus 160 Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~~ 193 (379)
|....+.-. -+-+++||+|.++..+ +..++..
T Consensus 76 ~N~g~~~a~--gd~i~~lD~D~~~~~~~l~~~~~~ 108 (219)
T cd06913 76 KNQAIAQSS--GRYLCFLDSDDVMMPQRIRLQYEA 108 (219)
T ss_pred HHHHHHhcC--CCEEEEECCCccCChhHHHHHHHH
Confidence 544433333 5899999999886654 5555543
No 55
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=57.42 E-value=55 Score=34.55 Aligned_cols=93 Identities=20% Similarity=0.233 Sum_probs=55.6
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcc----hHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCc
Q 047424 80 LRGSIAAVHSALKHASCPENIFFHFISAEFDSAS----PRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENP 155 (379)
Q Consensus 80 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~----~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~ 155 (379)
..++.++-.|+-+.-. -+.++|+|+.|.-+++- .+..-.++++.....++ +|....+.++.+ -.+.
T Consensus 161 fAgLrA~~eSla~Tg~-~~~FD~FVLSDs~dpdialAEq~a~~~l~~e~~g~~~i-fYRrRr~n~~RK--------aGNI 230 (736)
T COG2943 161 FAGLRATYESLAATGH-AEHFDFFVLSDSRDPDIALAEQKAWAELCRELGGEGNI-FYRRRRRNVKRK--------AGNI 230 (736)
T ss_pred HHHHHHHHHHHHhhCC-cccceEEEEcCCCCchhhhhHHHHHHHHHHHhCCCCce-eeehHhhhhccc--------ccCH
Confidence 4467788888888765 38899999998765542 23333444443322232 344333322211 1233
Q ss_pred chhHHhhhhhhccccCCeEEEEecceEEecch
Q 047424 156 LNYARNYLGDILDPCVDRVIYIDSDLVLVDDI 187 (379)
Q Consensus 156 ~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI 187 (379)
..++|=+= ..|+..|.||+|-+..+|-
T Consensus 231 aDfcrRwG-----~~Y~~MlVLDADSvMtgd~ 257 (736)
T COG2943 231 ADFCRRWG-----SAYSYMLVLDADSVMTGDC 257 (736)
T ss_pred HHHHHHhC-----cccceEEEeecccccCchH
Confidence 55666443 2399999999999999974
No 56
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=55.47 E-value=53 Score=32.59 Aligned_cols=113 Identities=11% Similarity=-0.003 Sum_probs=55.7
Q ss_pred eEE-EEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhh-hhh
Q 047424 70 HVA-MTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLI-SSS 147 (379)
Q Consensus 70 ~I~-~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~i-s~~ 147 (379)
+|+ ++++ ...++.-++.||++..+..+...++|..|+..++..+..+.. ...++. +...+... .+.- +..
T Consensus 3 PVlv~ayN--Rp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~----~~~i~~-i~~~~~~~-~~~~~~~~ 74 (334)
T cd02514 3 PVLVIACN--RPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSF----GDGVTH-IQHPPISI-KNVNPPHK 74 (334)
T ss_pred CEEEEecC--CHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhh----ccccEE-EEcccccc-cccCcccc
Confidence 444 5555 366778889999997522356788888888665433333222 111221 11111100 0000 000
Q ss_pred hHhhhcCcchhHHhhhhhhccc-cCCeEEEEecceEEecchHhHh
Q 047424 148 IREALENPLNYARNYLGDILDP-CVDRVIYIDSDLVLVDDIHKLW 191 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~-~~~RVLYLDsDvIV~~DI~eL~ 191 (379)
. ..+...+..+|.-+-.++.. .+++||.||.|+++--|.=+.+
T Consensus 75 ~-~~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf 118 (334)
T cd02514 75 F-QGYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYF 118 (334)
T ss_pred c-chhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHH
Confidence 0 00001112222333344321 3899999999999999954433
No 57
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=54.13 E-value=1.1e+02 Score=28.83 Aligned_cols=110 Identities=18% Similarity=0.221 Sum_probs=56.8
Q ss_pred CcchhhHHH-HHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHH---HhcCCceeEEEEEechhhH--------Hhhh
Q 047424 77 SEYLRGSIA-AVHSALKHASCPENIFFHFISAEFDSASPRVLTQLV---RSTFPSLNFKVYIFREDTV--------INLI 144 (379)
Q Consensus 77 ~~Yl~~~~v-~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~---~~~~~~l~~~~~~~d~~~~--------~~~i 144 (379)
...++.... +|..+++.-. |+++.+-|+-++..+..++.|+.+- .... +...+..-+.... ..+|
T Consensus 12 ~~iL~~~~~~~ll~li~~LG-p~nv~vSIyE~~S~D~T~~~L~~L~~~L~~lg--v~~~i~~~~~~~~~~~~~~~~~~RI 88 (241)
T PF11735_consen 12 EDILPSLWGDALLELIRFLG-PENVFVSIYESGSWDGTKEALRALDAELDALG--VPHSIVLSDITHRDEIERPPRLRRI 88 (241)
T ss_pred HhHHHHHHHHHHHHHHHHhC-cCeEEEEEEeCCCCccHHHHHHHHHHHHHhCC--CCeEEEeCCCcccccccccchhhhH
Confidence 345665555 7888888775 5888888887777666666665432 3222 2222222111110 1112
Q ss_pred hh--hhHh-hhcCcchhHHhhhhhhccccCCeEEEEecceEEe-cchHhHhccCC
Q 047424 145 SS--SIRE-ALENPLNYARNYLGDILDPCVDRVIYIDSDLVLV-DDIHKLWDITL 195 (379)
Q Consensus 145 s~--~i~~-~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~-~DI~eL~~~dl 195 (379)
.. .+|. ++. | ..++.-.+.. ..+|||||+ |+++. .|+-+|..+.-
T Consensus 89 ~~LA~lRN~ALe-P--L~~~~~~~~~--~fd~VlfLN-DV~f~~~Dil~LL~~~~ 137 (241)
T PF11735_consen 89 EYLAELRNRALE-P--LYDLARKRGR--RFDKVLFLN-DVFFCPEDILELLFTRN 137 (241)
T ss_pred HHHHHHHhHHHH-H--HHhhhhccCC--CcCEEEEec-CcccCHHHHHHHHhhcC
Confidence 11 1111 111 1 1111011112 379999999 86666 79999987754
No 58
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=53.82 E-value=1.2e+02 Score=27.09 Aligned_cols=101 Identities=12% Similarity=0.053 Sum_probs=55.6
Q ss_pred eEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhH
Q 047424 70 HVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIR 149 (379)
Q Consensus 70 ~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~ 149 (379)
.|++.+=+ -...+.-++.|+.+....+.++.+.|+.++.+++..+.++++... .+. +.+.. +++ .+ .
T Consensus 3 sIiip~~n-~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~-~~~--v~~i~-~~~--~~-~----- 69 (249)
T cd02525 3 SIIIPVRN-EEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAK-DPR--IRLID-NPK--RI-Q----- 69 (249)
T ss_pred EEEEEcCC-chhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhc-CCe--EEEEe-CCC--CC-c-----
Confidence 44544432 245667789999876653356778777777666656666665432 332 22221 111 01 1
Q ss_pred hhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhc
Q 047424 150 EALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWD 192 (379)
Q Consensus 150 ~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~ 192 (379)
..++...-+.. . .+-++++|+|.++..+ |.++.+
T Consensus 70 -------~~a~N~g~~~a-~-~d~v~~lD~D~~~~~~~l~~~~~ 104 (249)
T cd02525 70 -------SAGLNIGIRNS-R-GDIIIRVDAHAVYPKDYILELVE 104 (249)
T ss_pred -------hHHHHHHHHHh-C-CCEEEEECCCccCCHHHHHHHHH
Confidence 11122222222 2 6899999999998665 555554
No 59
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=53.49 E-value=87 Score=31.10 Aligned_cols=104 Identities=16% Similarity=0.146 Sum_probs=57.7
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.+-|++.+=+ -...+.-++.|+++..-. ++.+.|+.++.++...+.++++. +.+|..++++. .+++.. +. ...
T Consensus 42 ~VSViiP~~n-ee~~l~~~L~Sl~~q~Yp--~~EIivvdd~s~D~t~~iv~~~~-~~~p~~~i~~v-~~~~~~-G~-~~K 114 (373)
T TIGR03472 42 PVSVLKPLHG-DEPELYENLASFCRQDYP--GFQMLFGVQDPDDPALAVVRRLR-ADFPDADIDLV-IDARRH-GP-NRK 114 (373)
T ss_pred CeEEEEECCC-CChhHHHHHHHHHhcCCC--CeEEEEEeCCCCCcHHHHHHHHH-HhCCCCceEEE-ECCCCC-CC-ChH
Confidence 3566666543 245677889999987542 37777766665555566666654 44676666544 222211 10 000
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHK 189 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~e 189 (379)
. .+.... +.. .. .|-++++|+|+++..|--+
T Consensus 115 ~-------~~l~~~-~~~--a~-ge~i~~~DaD~~~~p~~L~ 145 (373)
T TIGR03472 115 V-------SNLINM-LPH--AR-HDILVIADSDISVGPDYLR 145 (373)
T ss_pred H-------HHHHHH-HHh--cc-CCEEEEECCCCCcChhHHH
Confidence 0 011111 111 12 6899999999999776543
No 60
>PRK15383 type III secretion system protein; Provisional
Probab=53.18 E-value=6.9 Score=36.82 Aligned_cols=23 Identities=30% Similarity=0.595 Sum_probs=19.9
Q ss_pred CeEEEEecceEEecchHhHhccC
Q 047424 172 DRVIYIDSDLVLVDDIHKLWDIT 194 (379)
Q Consensus 172 ~RVLYLDsDvIV~~DI~eL~~~d 194 (379)
+-+||||+|||+.+-+.-|+.-|
T Consensus 220 ~GCIYLD~DMilT~KLG~ly~PD 242 (335)
T PRK15383 220 GGCIYLDADMLLTDKLGTLYLPD 242 (335)
T ss_pred CceEEeecceeeecccccEEcCC
Confidence 67999999999999999887543
No 61
>PRK15384 type III secretion system protein; Provisional
Probab=53.00 E-value=6.6 Score=36.95 Aligned_cols=23 Identities=17% Similarity=0.541 Sum_probs=19.8
Q ss_pred CeEEEEecceEEecchHhHhccC
Q 047424 172 DRVIYIDSDLVLVDDIHKLWDIT 194 (379)
Q Consensus 172 ~RVLYLDsDvIV~~DI~eL~~~d 194 (379)
+-+||||+|||+.+-+.-|+.-|
T Consensus 217 ~GCIYLDaDMilT~KLG~ly~PD 239 (336)
T PRK15384 217 SGCIYLDADMIITEKLGGIYIPD 239 (336)
T ss_pred CceEEeeccceeecccccEEcCC
Confidence 67999999999999999887543
No 62
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=52.78 E-value=7 Score=36.76 Aligned_cols=23 Identities=26% Similarity=0.661 Sum_probs=19.9
Q ss_pred CeEEEEecceEEecchHhHhccC
Q 047424 172 DRVIYIDSDLVLVDDIHKLWDIT 194 (379)
Q Consensus 172 ~RVLYLDsDvIV~~DI~eL~~~d 194 (379)
+-+||||+|||+.+-+.-|+.-|
T Consensus 212 ~GCIYLD~DMilT~KLG~ly~PD 234 (326)
T PRK15382 212 EGCIYLDADMIITDKLGVLYAPD 234 (326)
T ss_pred CceEEeecceeeecccccEEcCC
Confidence 67999999999999999887543
No 63
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=52.31 E-value=1.7e+02 Score=25.84 Aligned_cols=92 Identities=11% Similarity=0.108 Sum_probs=50.6
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhHH
Q 047424 81 RGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYAR 160 (379)
Q Consensus 81 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~R 160 (379)
..+..++.|+.+... ...+.+.|+.++.++...+.++++.+ ..+.+ .++....+ .+. ..++
T Consensus 10 ~~l~~~l~sl~~q~~-~~~~eiiiVDd~S~d~t~~~~~~~~~-~~~~i--~~~~~~~n--~G~-------------~~a~ 70 (224)
T cd06442 10 ENIPELIERLDAALK-GIDYEIIVVDDNSPDGTAEIVRELAK-EYPRV--RLIVRPGK--RGL-------------GSAY 70 (224)
T ss_pred hhHHHHHHHHHHhhc-CCCeEEEEEeCCCCCChHHHHHHHHH-hCCce--EEEecCCC--CCh-------------HHHH
Confidence 456778888887654 24578888887776666666666543 33433 32222111 111 1111
Q ss_pred hhhhhhccccCCeEEEEecceEEecc-hHhHhcc
Q 047424 161 NYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWDI 193 (379)
Q Consensus 161 l~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~~ 193 (379)
...-+... -+-|+++|+|.++..+ |..+.+.
T Consensus 71 n~g~~~a~--gd~i~~lD~D~~~~~~~l~~l~~~ 102 (224)
T cd06442 71 IEGFKAAR--GDVIVVMDADLSHPPEYIPELLEA 102 (224)
T ss_pred HHHHHHcC--CCEEEEEECCCCCCHHHHHHHHHH
Confidence 11111122 3789999999887664 5566553
No 64
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=51.54 E-value=1.3e+02 Score=27.07 Aligned_cols=101 Identities=14% Similarity=0.044 Sum_probs=51.7
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcC-CceeEEEEEechhhHHhhhhhh
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTF-PSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~-~~l~~~~~~~d~~~~~~~is~~ 147 (379)
|-|++.+= |....+..+|.|+++.......+.+.|+ |+.++...+.+++...... ...++...... +. .+..
T Consensus 3 vSViIp~y-Ne~~~l~~~L~sl~~q~~~~~~~eIiVv-D~s~D~t~~~~~~~~~~~~~~~~~i~~~~~~-~~-~G~k--- 75 (232)
T cd06437 3 VTVQLPVF-NEKYVVERLIEAACALDYPKDRLEIQVL-DDSTDETVRLAREIVEEYAAQGVNIKHVRRA-DR-TGYK--- 75 (232)
T ss_pred eEEEEecC-CcHHHHHHHHHHHHhcCCCccceEEEEE-ECCCCcHHHHHHHHHHHHhhcCCceEEEECC-CC-CCCc---
Confidence 55665554 3456778899999875443344666554 4555555666666543210 11223222111 10 0100
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecch
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDI 187 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI 187 (379)
+.++-..-+.- . .+=++.+|+|+++..|-
T Consensus 76 ---------~~a~n~g~~~a-~-~~~i~~~DaD~~~~~~~ 104 (232)
T cd06437 76 ---------AGALAEGMKVA-K-GEYVAIFDADFVPPPDF 104 (232)
T ss_pred ---------hHHHHHHHHhC-C-CCEEEEEcCCCCCChHH
Confidence 01111111111 2 68999999999997765
No 65
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=51.38 E-value=1.5e+02 Score=25.12 Aligned_cols=94 Identities=15% Similarity=0.080 Sum_probs=52.5
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhH
Q 047424 80 LRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYA 159 (379)
Q Consensus 80 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~ 159 (379)
...+.-++.|+.+.......+.+.|+.++.++...+.+++... .++.+ .++....+ . +. ..+
T Consensus 9 ~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~-~~~~~--~~~~~~~n-~-G~-------------~~a 70 (185)
T cd04179 9 EENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAA-RVPRV--RVIRLSRN-F-GK-------------GAA 70 (185)
T ss_pred HhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHH-hCCCe--EEEEccCC-C-Cc-------------cHH
Confidence 3566778899988764223577777777766655556665443 34433 22222211 1 11 111
Q ss_pred HhhhhhhccccCCeEEEEecceEEecc-hHhHhcc
Q 047424 160 RNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWDI 193 (379)
Q Consensus 160 Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~~ 193 (379)
+...-+... -+-++.||+|.++..+ |.+|.+.
T Consensus 71 ~n~g~~~a~--gd~i~~lD~D~~~~~~~l~~l~~~ 103 (185)
T cd04179 71 VRAGFKAAR--GDIVVTMDADLQHPPEDIPKLLEK 103 (185)
T ss_pred HHHHHHHhc--CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 111112222 2789999999888776 6777764
No 66
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=50.45 E-value=1.7e+02 Score=26.23 Aligned_cols=99 Identities=13% Similarity=0.053 Sum_probs=49.1
Q ss_pred EEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcch-HHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhH
Q 047424 71 VAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASP-RVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIR 149 (379)
Q Consensus 71 I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~-~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~ 149 (379)
|++.+=+.....+.-++.|+....- .++.+.|+.++.++... +.++++++...+ ++.+...+.. .+....
T Consensus 2 iiip~~ne~~~~l~~~l~sl~~q~~--~~~eiiVvdd~s~D~t~~~~i~~~~~~~~~--~i~~i~~~~~--~G~~~~--- 72 (236)
T cd06435 2 IHVPCYEEPPEMVKETLDSLAALDY--PNFEVIVIDNNTKDEALWKPVEAHCAQLGE--RFRFFHVEPL--PGAKAG--- 72 (236)
T ss_pred eeEeeCCCcHHHHHHHHHHHHhCCC--CCcEEEEEeCCCCchhHHHHHHHHHHHhCC--cEEEEEcCCC--CCCchH---
Confidence 3444333333456677888886543 34777777666555432 444555433222 3333322211 111011
Q ss_pred hhhcCcchhHHhhhhhhccccCCeEEEEecceEEecch
Q 047424 150 EALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDI 187 (379)
Q Consensus 150 ~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI 187 (379)
++...-+......+=|+++|+|+++..|-
T Consensus 73 ---------a~n~g~~~a~~~~d~i~~lD~D~~~~~~~ 101 (236)
T cd06435 73 ---------ALNYALERTAPDAEIIAVIDADYQVEPDW 101 (236)
T ss_pred ---------HHHHHHHhcCCCCCEEEEEcCCCCcCHHH
Confidence 12222122221268899999999887653
No 67
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=49.67 E-value=1.7e+02 Score=25.33 Aligned_cols=84 Identities=20% Similarity=0.079 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHH-HHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhH
Q 047424 81 RGSIAAVHSALKHASCPENIFFHFISAEFDSASPRV-LTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYA 159 (379)
Q Consensus 81 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~-L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~ 159 (379)
..+.-++.|++..+.. ...+.|+.++.+.+.... +++.. ...+ ++++....+ .+. ..+
T Consensus 13 ~~l~~~l~Sl~~q~~~--~~eiiivdd~ss~d~t~~~~~~~~-~~~~---i~~i~~~~n--~G~-------------~~a 71 (201)
T cd04195 13 EFLREALESILKQTLP--PDEVVLVKDGPVTQSLNEVLEEFK-RKLP---LKVVPLEKN--RGL-------------GKA 71 (201)
T ss_pred HHHHHHHHHHHhcCCC--CcEEEEEECCCCchhHHHHHHHHH-hcCC---eEEEEcCcc--ccH-------------HHH
Confidence 4667889999987642 356666777764443333 33332 2232 333332221 111 112
Q ss_pred HhhhhhhccccCCeEEEEecceEEecch
Q 047424 160 RNYLGDILDPCVDRVIYIDSDLVLVDDI 187 (379)
Q Consensus 160 Rl~lp~lLp~~~~RVLYLDsDvIV~~DI 187 (379)
|...-..- . .+=++++|+|.++..+-
T Consensus 72 ~N~g~~~a-~-gd~i~~lD~Dd~~~~~~ 97 (201)
T cd04195 72 LNEGLKHC-T-YDWVARMDTDDISLPDR 97 (201)
T ss_pred HHHHHHhc-C-CCEEEEeCCccccCcHH
Confidence 22211212 2 58899999999887643
No 68
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=48.73 E-value=14 Score=34.23 Aligned_cols=25 Identities=28% Similarity=0.537 Sum_probs=20.7
Q ss_pred hhhhccccCCeEEEEecceEEecchH
Q 047424 163 LGDILDPCVDRVIYIDSDLVLVDDIH 188 (379)
Q Consensus 163 lp~lLp~~~~RVLYLDsDvIV~~DI~ 188 (379)
++.+||. ++-||+||+|+-|+..=.
T Consensus 35 va~~L~~-~~~vlflDaDigVvNp~~ 59 (222)
T PF03314_consen 35 VAKILPE-YDWVLFLDADIGVVNPNR 59 (222)
T ss_pred HHHHhcc-CCEEEEEcCCceeecCcc
Confidence 4567887 899999999999998643
No 69
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=47.88 E-value=2.3e+02 Score=28.28 Aligned_cols=112 Identities=13% Similarity=0.162 Sum_probs=60.1
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCc-eeEEEEEech--hhHHhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPS-LNFKVYIFRE--DTVINLI 144 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~-l~~~~~~~d~--~~~~~~i 144 (379)
.+-|++.+-+. ...+..++.|+++..- +.++.+.|+.|+.++...+.++++.++ +|. .++++..... .-..++.
T Consensus 41 ~VSVIIpa~Ne-~~~L~~~L~sL~~q~y-p~~~eIIVVDd~StD~T~~i~~~~~~~-~~~~~~i~vi~~~~~~~g~~Gk~ 117 (384)
T TIGR03469 41 AVVAVVPARNE-ADVIGECVTSLLEQDY-PGKLHVILVDDHSTDGTADIARAAARA-YGRGDRLTVVSGQPLPPGWSGKL 117 (384)
T ss_pred CEEEEEecCCc-HhHHHHHHHHHHhCCC-CCceEEEEEeCCCCCcHHHHHHHHHHh-cCCCCcEEEecCCCCCCCCcchH
Confidence 45666655433 4667888999987653 235788888887777766777766432 331 1344332211 0011110
Q ss_pred hhhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhc
Q 047424 145 SSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWD 192 (379)
Q Consensus 145 s~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~ 192 (379)
...+.. ...+ .+..++ .|-++++|+|+++..| +.++.+
T Consensus 118 -~A~n~g----~~~A----~~~~~~-gd~llflDaD~~~~p~~l~~lv~ 156 (384)
T TIGR03469 118 -WAVSQG----IAAA----RTLAPP-ADYLLLTDADIAHGPDNLARLVA 156 (384)
T ss_pred -HHHHHH----HHHH----hccCCC-CCEEEEECCCCCCChhHHHHHHH
Confidence 001100 0111 112222 6899999999998665 466654
No 70
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=47.49 E-value=1.9e+02 Score=31.67 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=57.2
Q ss_pred ceeEEEEeCCcch----hhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchH----HHHHHHHhcCCceeEEEEEechhh
Q 047424 68 LVHVAMTLDSEYL----RGSIAAVHSALKHASCPENIFFHFISAEFDSASPR----VLTQLVRSTFPSLNFKVYIFREDT 139 (379)
Q Consensus 68 ~i~I~~~~D~~Yl----~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~----~L~~~~~~~~~~l~~~~~~~d~~~ 139 (379)
.+.|++.+=+.-. ..+.+++.|+..... +.+++|+++.|+.+++... .+.++.++.....++.+..- .+.
T Consensus 125 ~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~-~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R-~~n 202 (691)
T PRK05454 125 RTAILMPIYNEDPARVFAGLRAMYESLAATGH-GAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRR-RRN 202 (691)
T ss_pred ceEEEEeCCCCChHHHHHHHHHHHHHHHhcCC-CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEEC-CcC
Confidence 4556655433322 356677888886544 3579999998876654321 23344433222223332111 111
Q ss_pred HHhhhhhhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhc
Q 047424 140 VINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWD 192 (379)
Q Consensus 140 ~~~~is~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~ 192 (379)
.++... +...+.|..- . .+|-++-||+|+++..| +.++..
T Consensus 203 -~~~KaG-------Nl~~~~~~~~----~-~~eyivvLDADs~m~~d~L~~lv~ 243 (691)
T PRK05454 203 -VGRKAG-------NIADFCRRWG----G-AYDYMVVLDADSLMSGDTLVRLVR 243 (691)
T ss_pred -CCccHH-------HHHHHHHhcC----C-CcCEEEEEcCCCCCCHHHHHHHHH
Confidence 111111 1112233221 2 38999999999999998 455553
No 71
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=47.08 E-value=59 Score=31.26 Aligned_cols=93 Identities=15% Similarity=0.050 Sum_probs=51.9
Q ss_pred EEEEeCCcc--hhh-HHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 71 VAMTLDSEY--LRG-SIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 71 I~~~~D~~Y--l~~-~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
|-++-..++ ++. +..++.|+.++++. ..+++++.+ .+...+ .+|.. +-...-.+.++
T Consensus 48 IW~~W~QG~e~aP~~Vk~ci~s~~k~~~~---~~Vi~lt~~-------Ni~~Yv--~~P~~------i~~k~~~g~i~-- 107 (276)
T PF05704_consen 48 IWVCWWQGEENAPEIVKKCINSWRKNAPD---YEVILLTED-------NIKDYV--DIPDF------ILEKYEKGKIS-- 107 (276)
T ss_pred EEEEECCCccccCHHHHHHHHHHHHHCCC---CeEEEEChH-------HHHHHc--CCchh------HHHHHHcCCCc--
Confidence 444444333 444 57889999999843 667777742 344433 12210 00011112222
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhc
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWD 192 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~ 192 (379)
.++. +-+.|+.|=.--.. +|+|+++++.++|.+.+.
T Consensus 108 --~a~~--SDilR~~LL~~yGG-----vWiDatv~~t~~l~~~~~ 143 (276)
T PF05704_consen 108 --PAHF--SDILRLALLYKYGG-----VWIDATVYLTKPLDDEIF 143 (276)
T ss_pred --hhHH--HHHHHHHHHHHcCc-----EEeCCceEECCchhHHHh
Confidence 1222 46788877443333 899999999999997654
No 72
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=44.79 E-value=2e+02 Score=24.48 Aligned_cols=87 Identities=14% Similarity=0.126 Sum_probs=48.0
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhH
Q 047424 80 LRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYA 159 (379)
Q Consensus 80 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~ 159 (379)
...+..++.|+++.+. .++.+.|+.++.+++..+.+++.... +..+ +..+. .+. ..+
T Consensus 10 ~~~l~~~l~sl~~q~~--~~~evivvDd~s~d~~~~~~~~~~~~------~~~~-~~~~~-~g~-------------~~a 66 (202)
T cd06433 10 AETLEETIDSVLSQTY--PNIEYIVIDGGSTDGTVDIIKKYEDK------ITYW-ISEPD-KGI-------------YDA 66 (202)
T ss_pred HHHHHHHHHHHHhCCC--CCceEEEEeCCCCccHHHHHHHhHhh------cEEE-EecCC-cCH-------------HHH
Confidence 3567788999997764 33777667666666655556554321 1111 11111 111 111
Q ss_pred HhhhhhhccccCCeEEEEecceEEecc-hHhHh
Q 047424 160 RNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLW 191 (379)
Q Consensus 160 Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~ 191 (379)
+...-+... -+-|++||+|.++..+ +.++.
T Consensus 67 ~n~~~~~a~--~~~v~~ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 67 MNKGIALAT--GDIIGFLNSDDTLLPGALLAVV 97 (202)
T ss_pred HHHHHHHcC--CCEEEEeCCCcccCchHHHHHH
Confidence 221112222 5889999999988765 66665
No 73
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=43.53 E-value=1.5e+02 Score=28.17 Aligned_cols=94 Identities=21% Similarity=0.187 Sum_probs=51.3
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhHH
Q 047424 81 RGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYAR 160 (379)
Q Consensus 81 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~R 160 (379)
.-+..++.|+.+... +.++.|.|+.++.+++..+.|.+++.+.. +..+...... ...++ .+-+|
T Consensus 17 ~~l~~~l~~l~~~~~-~~~~eiIvvd~~s~~~~~~~l~~~~~~~~----~~~~i~~~~~-~~~f~----------~a~ar 80 (281)
T PF10111_consen 17 ERLRNCLESLSQFQS-DPDFEIIVVDDGSSDEFDEELKKLCEKNG----FIRYIRHEDN-GEPFS----------RAKAR 80 (281)
T ss_pred HHHHHHHHHHHhcCC-CCCEEEEEEECCCchhHHHHHHHHHhccC----ceEEEEcCCC-CCCcC----------HHHHH
Confidence 344455667766443 36788877777766654566777665422 1111111110 00111 13344
Q ss_pred hhhhhhccccCCeEEEEecceEEecch-HhHhc
Q 047424 161 NYLGDILDPCVDRVIYIDSDLVLVDDI-HKLWD 192 (379)
Q Consensus 161 l~lp~lLp~~~~RVLYLDsDvIV~~DI-~eL~~ 192 (379)
....+.-. -+-|+++|+|+++..|. .++.+
T Consensus 81 N~g~~~A~--~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 81 NIGAKYAR--GDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred HHHHHHcC--CCEEEEEcCCeeeCHHHHHHHHH
Confidence 44444443 58999999999998765 34555
No 74
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=42.97 E-value=2.1e+02 Score=24.24 Aligned_cols=94 Identities=17% Similarity=0.214 Sum_probs=49.4
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhH
Q 047424 80 LRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYA 159 (379)
Q Consensus 80 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~ 159 (379)
...+.-+|.|+.+.+. .++.+.|+.++.++...+.+++.... .+ .++.. ....+. + .. .+.+
T Consensus 9 ~~~l~~~l~sl~~q~~--~~~eiivvdd~s~d~t~~~~~~~~~~-~~-~~~~~-~~~~~~--~-~~----------~~~~ 70 (182)
T cd06420 9 PEALELVLKSVLNQSI--LPFEVIIADDGSTEETKELIEEFKSQ-FP-IPIKH-VWQEDE--G-FR----------KAKI 70 (182)
T ss_pred hHHHHHHHHHHHhccC--CCCEEEEEeCCCchhHHHHHHHHHhh-cC-CceEE-EEcCCc--c-hh----------HHHH
Confidence 4567788999988764 34677777777665544555544321 11 12211 111110 0 00 0111
Q ss_pred HhhhhhhccccCCeEEEEecceEEecc-hHhHhcc
Q 047424 160 RNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWDI 193 (379)
Q Consensus 160 Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~~ 193 (379)
+-...+.-. -+-+++||+|.++..+ |..+.+.
T Consensus 71 ~n~g~~~a~--g~~i~~lD~D~~~~~~~l~~~~~~ 103 (182)
T cd06420 71 RNKAIAAAK--GDYLIFIDGDCIPHPDFIADHIEL 103 (182)
T ss_pred HHHHHHHhc--CCEEEEEcCCcccCHHHHHHHHHH
Confidence 111112222 5899999999999777 5555544
No 75
>PRK10018 putative glycosyl transferase; Provisional
Probab=41.37 E-value=3.2e+02 Score=26.04 Aligned_cols=102 Identities=16% Similarity=0.044 Sum_probs=56.7
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.|-|++.+-+ -...+.-+|.|++..+- .++.+.|+.++.+ +.+.+++.+... ...++++...+.+ .|
T Consensus 6 ~VSVIip~yN-~~~~l~~~l~Svl~Qt~--~~~EiIVVDDgS~--~~~~~~~~~~~~-~~~ri~~i~~~~n--~G----- 72 (279)
T PRK10018 6 LISIYMPTWN-RQQLAIRAIKSVLRQDY--SNWEMIIVDDCST--SWEQLQQYVTAL-NDPRITYIHNDIN--SG----- 72 (279)
T ss_pred EEEEEEEeCC-CHHHHHHHHHHHHhCCC--CCeEEEEEECCCC--CHHHHHHHHHHc-CCCCEEEEECCCC--CC-----
Confidence 5677777653 24445678999998754 4578877777665 334555555431 2223443322211 01
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhc
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWD 192 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~ 192 (379)
...+|...-+.-. -+-|++||+|.++..+ |..+.+
T Consensus 73 --------~~~a~N~gi~~a~--g~~I~~lDaDD~~~p~~l~~~~~ 108 (279)
T PRK10018 73 --------ACAVRNQAIMLAQ--GEYITGIDDDDEWTPNRLSVFLA 108 (279)
T ss_pred --------HHHHHHHHHHHcC--CCEEEEECCCCCCCccHHHHHHH
Confidence 1112222112222 5889999999998876 666654
No 76
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=39.18 E-value=2.1e+02 Score=29.20 Aligned_cols=101 Identities=20% Similarity=0.232 Sum_probs=58.9
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.+.|++.+=++ -..+..++.|+++..- .++.+.++.|+.+++..+.++++..+ .+.+ ++.....+ .++ ...
T Consensus 76 ~vsViIP~yNE-~~~i~~~l~sll~q~y--p~~eIivVdDgs~D~t~~~~~~~~~~-~~~v--~vv~~~~n--~Gk-a~A 146 (444)
T PRK14583 76 LVSILVPCFNE-GLNARETIHAALAQTY--TNIEVIAINDGSSDDTAQVLDALLAE-DPRL--RVIHLAHN--QGK-AIA 146 (444)
T ss_pred cEEEEEEeCCC-HHHHHHHHHHHHcCCC--CCeEEEEEECCCCccHHHHHHHHHHh-CCCE--EEEEeCCC--CCH-HHH
Confidence 46666554432 3456788999987654 25888888888877777777776543 4544 33332211 111 111
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLW 191 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~ 191 (379)
. +++ + . ... .|-++.+|+|.++..| +.++.
T Consensus 147 l--------N~g---l-~-~a~-~d~iv~lDAD~~~~~d~L~~lv 177 (444)
T PRK14583 147 L--------RMG---A-A-AAR-SEYLVCIDGDALLDKNAVPYLV 177 (444)
T ss_pred H--------HHH---H-H-hCC-CCEEEEECCCCCcCHHHHHHHH
Confidence 1 111 0 1 122 6899999999999887 34443
No 77
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=36.73 E-value=3.5e+02 Score=25.39 Aligned_cols=22 Identities=27% Similarity=0.468 Sum_probs=18.5
Q ss_pred CCeEEEEecceEEecc-hHhHhc
Q 047424 171 VDRVIYIDSDLVLVDD-IHKLWD 192 (379)
Q Consensus 171 ~~RVLYLDsDvIV~~D-I~eL~~ 192 (379)
++-|+.+|+|+++..| |.++..
T Consensus 96 ~~~i~~~DaD~~~~p~~l~~~v~ 118 (254)
T cd04191 96 YDYMVVLDADSLMSGDTIVRLVR 118 (254)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHH
Confidence 7899999999999987 566654
No 78
>PRK10073 putative glycosyl transferase; Provisional
Probab=36.04 E-value=3.6e+02 Score=26.26 Aligned_cols=102 Identities=13% Similarity=0.144 Sum_probs=61.0
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.+-|++.+= |-...+.-++.||+..+- .++.+.|+.|+.++...+.+++... ..+.+ ++.. .+. .+ .
T Consensus 7 ~vSVIIP~y-N~~~~L~~~l~Sl~~Qt~--~~~EIIiVdDgStD~t~~i~~~~~~-~~~~i--~vi~--~~n-~G-~--- 73 (328)
T PRK10073 7 KLSIIIPLY-NAGKDFRAFMESLIAQTW--TALEIIIVNDGSTDNSVEIAKHYAE-NYPHV--RLLH--QAN-AG-V--- 73 (328)
T ss_pred eEEEEEecc-CCHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCccHHHHHHHHHh-hCCCE--EEEE--CCC-CC-h---
Confidence 567776653 234677788999998765 4588888888888777777776643 34433 3321 111 11 1
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhcc
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWDI 193 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~~ 193 (379)
+.+|...-+... -+-|+++|+|-.+..+ +..+.+.
T Consensus 74 ---------~~arN~gl~~a~--g~yi~flD~DD~~~p~~l~~l~~~ 109 (328)
T PRK10073 74 ---------SVARNTGLAVAT--GKYVAFPDADDVVYPTMYETLMTM 109 (328)
T ss_pred ---------HHHHHHHHHhCC--CCEEEEECCCCccChhHHHHHHHH
Confidence 122222222222 4789999999988776 4455543
No 79
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=35.92 E-value=4.3e+02 Score=25.85 Aligned_cols=109 Identities=13% Similarity=0.137 Sum_probs=56.5
Q ss_pred CceeEEEEeCCcchhhHHHHHHHHHHhcC------CCCcEEEEEEecCCCCcchHHHHHHHHhc-CCceeEEEEEechhh
Q 047424 67 SLVHVAMTLDSEYLRGSIAAVHSALKHAS------CPENIFFHFISAEFDSASPRVLTQLVRST-FPSLNFKVYIFREDT 139 (379)
Q Consensus 67 ~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~------~~~~i~fhil~~~~s~~~~~~L~~~~~~~-~~~l~~~~~~~d~~~ 139 (379)
..+-|++.+=+. ...+..++.|+.+... ...++.++|+.|+.++...+.+++..... .+..++++.....+
T Consensus 70 ~~isVVIP~yNe-~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~N- 147 (333)
T PTZ00260 70 VDLSIVIPAYNE-EDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLRN- 147 (333)
T ss_pred eEEEEEEeeCCC-HHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCCC-
Confidence 356666655432 3345566666665321 11358888888888877777777765432 12233444433211
Q ss_pred HHhhhhhhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEe-cchHhHhcc
Q 047424 140 VINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLV-DDIHKLWDI 193 (379)
Q Consensus 140 ~~~~is~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~-~DI~eL~~~ 193 (379)
.++ ...++... .. .. -+-|+++|+|.... +++..|.+.
T Consensus 148 -~G~-~~A~~~Gi----~~---------a~-gd~I~~~DaD~~~~~~~l~~l~~~ 186 (333)
T PTZ00260 148 -KGK-GGAVRIGM----LA---------SR-GKYILMVDADGATDIDDFDKLEDI 186 (333)
T ss_pred -CCh-HHHHHHHH----HH---------cc-CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 111 11111100 01 11 47899999997543 466666653
No 80
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=34.84 E-value=1.6e+02 Score=25.29 Aligned_cols=37 Identities=11% Similarity=-0.042 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHH
Q 047424 81 RGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVL 117 (379)
Q Consensus 81 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L 117 (379)
..+..++.|+.+.......+.+.|+.++.+++..+.+
T Consensus 10 ~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~ 46 (183)
T cd06438 10 AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVA 46 (183)
T ss_pred HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHH
Confidence 4566778888765432245778888888766544433
No 81
>PRK10063 putative glycosyl transferase; Provisional
Probab=34.39 E-value=3.8e+02 Score=24.84 Aligned_cols=98 Identities=11% Similarity=0.126 Sum_probs=50.7
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcC-CCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHAS-CPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~-~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
+-|++.+=+ -...+.-++.|+..... ...++.+.|+.++.++...+.+++.... .++++..- ++ .|. ...
T Consensus 3 vSVIi~~yN-~~~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~----~~i~~i~~-~~--~G~-~~A 73 (248)
T PRK10063 3 LSVITVAFR-NLEGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGI----FNLRFVSE-PD--NGI-YDA 73 (248)
T ss_pred EEEEEEeCC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhccc----CCEEEEEC-CC--CCH-HHH
Confidence 455554432 25566777888875321 1245777777777776666655553211 12333221 11 121 111
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHK 189 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~e 189 (379)
++.. + +... -+-|++||+|-++..+..+
T Consensus 74 ~N~G-----------i-~~a~--g~~v~~ld~DD~~~~~~~~ 101 (248)
T PRK10063 74 MNKG-----------I-AMAQ--GRFALFLNSGDIFHQDAAN 101 (248)
T ss_pred HHHH-----------H-HHcC--CCEEEEEeCCcccCcCHHH
Confidence 1111 1 1111 4799999999888887543
No 82
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=34.12 E-value=1.4e+02 Score=29.16 Aligned_cols=118 Identities=15% Similarity=0.123 Sum_probs=63.2
Q ss_pred CceeEEEEeCCcchhhHHHHHHHHHHhcCC--CCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhh
Q 047424 67 SLVHVAMTLDSEYLRGSIAAVHSALKHASC--PENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLI 144 (379)
Q Consensus 67 ~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~--~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~i 144 (379)
.+|-||+-++..-...+...+.+++..... .+.+.||++................... ..+++- ....+....
T Consensus 25 GPiSvAvf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~H~v~~~~~~~~~~~~~~~~~~~--~~~C~~---~~~~~~~~~ 99 (317)
T PF13896_consen 25 GPISVAVFVPGPDAKQALDAISYLLRCCCPRVRKNVTFHLVFPNSHFPTSCDSIEANLSS--PFSCSD---FVRLLSELT 99 (317)
T ss_pred CCEEEEEEecchhHHHHHHHHHHHHHhcCHHhHhhEEEEEEeecccCcccccccccccCC--CCCcCc---hhhhHHHHh
Confidence 578888777765555555666666543321 2579999988754432111100000000 001100 000111111
Q ss_pred h----hhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHh
Q 047424 145 S----SSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLW 191 (379)
Q Consensus 145 s----~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~ 191 (379)
+ ........-|.|+.|...-+-.. .+-|+.+|.|++...++.+-+
T Consensus 100 ~~~~~~~~~~~~~YPiN~LRNvAr~~a~--T~~v~~~DvD~~ps~~l~~~l 148 (317)
T PF13896_consen 100 SRENNYDPAPNALYPINLLRNVARSGAR--TDYVFLLDVDFLPSPGLYEKL 148 (317)
T ss_pred hhhhhcccccCCCCChHHHHHHHHHhcC--cceEEEecceeeeCcchHHHH
Confidence 0 00011233478888887766554 589999999999999998754
No 83
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=33.05 E-value=3.8e+02 Score=24.35 Aligned_cols=107 Identities=11% Similarity=-0.017 Sum_probs=55.4
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.+-|++.+=+ -...+..++.++.+......++.+.|+.++.++...+.++++.. .++...+.+..-..+ . ++ ..
T Consensus 10 ~vsVvIp~yn-e~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~-~~~~~~v~~~~~~~n-~-G~-~~- 83 (243)
T PLN02726 10 KYSIIVPTYN-ERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQK-VYGEDRILLRPRPGK-L-GL-GT- 83 (243)
T ss_pred eEEEEEccCC-chhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHH-hcCCCcEEEEecCCC-C-CH-HH-
Confidence 4666666543 34444555666655443223688888888877776666666543 233223333221111 0 11 00
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEec-chHhHhcc
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVD-DIHKLWDI 193 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~-DI~eL~~~ 193 (379)
++...-.... -+-++++|+|..+.. .|.+|++.
T Consensus 84 -----------a~n~g~~~a~--g~~i~~lD~D~~~~~~~l~~l~~~ 117 (243)
T PLN02726 84 -----------AYIHGLKHAS--GDFVVIMDADLSHHPKYLPSFIKK 117 (243)
T ss_pred -----------HHHHHHHHcC--CCEEEEEcCCCCCCHHHHHHHHHH
Confidence 1111111112 479999999998654 45566653
No 84
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=32.62 E-value=2.7e+02 Score=24.32 Aligned_cols=42 Identities=2% Similarity=-0.106 Sum_probs=25.9
Q ss_pred EEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchH
Q 047424 71 VAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPR 115 (379)
Q Consensus 71 I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~ 115 (379)
|++.+=+ -...+.-++.|+++... .++.+.|+.++.+++..+
T Consensus 3 vii~~~n-~~~~l~~~l~sl~~q~~--~~~evivvdd~s~d~~~~ 44 (221)
T cd02522 3 IIIPTLN-EAENLPRLLASLRRLNP--LPLEIIVVDGGSTDGTVA 44 (221)
T ss_pred EEEEccC-cHHHHHHHHHHHHhccC--CCcEEEEEeCCCCccHHH
Confidence 4444432 24467788999998764 457777776665554333
No 85
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=31.70 E-value=1.8e+02 Score=29.65 Aligned_cols=99 Identities=20% Similarity=0.281 Sum_probs=52.8
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcc--hHHHHHHHHhcCCceeEEEEEechhhHHhhhhh
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSAS--PRVLTQLVRSTFPSLNFKVYIFREDTVINLISS 146 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~--~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~ 146 (379)
..|++.+-+.=--.++-+++|++..++. .-+.=.|+.|+.|++. +++|.+.+.. |..+ +++ |..+.-+++|..
T Consensus 157 ~SVviVFHNEGws~LmRTVHSVi~RsP~-~~l~eivlvDDfSdKehLkekLDeYv~~-fnGl-VkV--~Rne~REGLI~a 231 (603)
T KOG3737|consen 157 SSVVIVFHNEGWSTLMRTVHSVIKRSPR-KYLAEIVLVDDFSDKEHLKEKLDEYVKL-FNGL-VKV--FRNERREGLIQA 231 (603)
T ss_pred ceEEEEEecCccHHHHHHHHHHHhcCcH-HhhheEEEeccCCccHHHHHHHHHHHHH-hcCE-EEE--Eecchhhhhhhh
Confidence 3444444443344677889999998863 5555567777766542 3344444422 3222 232 333334566643
Q ss_pred hhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecch
Q 047424 147 SIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDI 187 (379)
Q Consensus 147 ~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI 187 (379)
....+- +.. =+=+||||+-.-|..+-
T Consensus 232 RSiGA~------------~at---GeV~ifLDAHCEVntNW 257 (603)
T KOG3737|consen 232 RSIGAQ------------KAT---GEVLIFLDAHCEVNTNW 257 (603)
T ss_pred hccchh------------hcc---ccEEEEEecceeeeccc
Confidence 111110 111 25678899888887763
No 86
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=31.23 E-value=3.9e+02 Score=25.70 Aligned_cols=113 Identities=19% Similarity=0.292 Sum_probs=59.0
Q ss_pred CCCCceeEEEEeCC--cchhhHHHHHHHHHHhcCCCCcEEEEEEecCCC--CcchHHHHHHHHh---------cCCceeE
Q 047424 64 CDPSLVHVAMTLDS--EYLRGSIAAVHSALKHASCPENIFFHFISAEFD--SASPRVLTQLVRS---------TFPSLNF 130 (379)
Q Consensus 64 ~~~~~i~I~~~~D~--~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s--~~~~~~L~~~~~~---------~~~~l~~ 130 (379)
.+.+.|=|+....+ .|+....-.|.|+ +-..+.|.+-|++++.+ ....+.|++.+.+ .|..+.+
T Consensus 22 ~~~e~VLILtplrna~~~l~~y~~~L~~L---~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~itI 98 (269)
T PF03452_consen 22 RNKESVLILTPLRNAASFLPDYFDNLLSL---TYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSITI 98 (269)
T ss_pred ccCCeEEEEEecCCchHHHHHHHHHHHhC---CCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceEEE
Confidence 34455666665532 4666666666666 22237789989998877 5556667655433 1222222
Q ss_pred EEEEechhh---HHhh----hhhhhHhhhcCcchhHHhhh-hhhccccCCeEEEEecceEE
Q 047424 131 KVYIFREDT---VINL----ISSSIREALENPLNYARNYL-GDILDPCVDRVIYIDSDLVL 183 (379)
Q Consensus 131 ~~~~~d~~~---~~~~----is~~i~~~~~s~~~y~Rl~l-p~lLp~~~~RVLYLDsDvIV 183 (379)
--..|.... .+++ .+. .|+ ..++=+|.+| ...|....+-|++||+|++-
T Consensus 99 l~~df~~~~~~~~~~RH~~~~Q~-~RR---~~mAraRN~LL~~aL~p~~swVlWlDaDIv~ 155 (269)
T PF03452_consen 99 LRKDFGQQLSQDRSERHAFEVQR-PRR---RAMARARNFLLSSALGPWHSWVLWLDADIVE 155 (269)
T ss_pred EcCCCcccccCchhhccchhhHH-HHH---HHHHHHHHHHHHhhcCCcccEEEEEecCccc
Confidence 111111110 0000 000 111 1245566653 34454348999999999993
No 87
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=27.83 E-value=4.1e+02 Score=23.11 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=24.7
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHH
Q 047424 81 RGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLT 118 (379)
Q Consensus 81 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~ 118 (379)
..+..+|.||+... ..+.+.|+.++.++...+.++
T Consensus 10 ~~l~~~l~sl~~~~---~~~eIivvdd~S~D~t~~~~~ 44 (191)
T cd06436 10 AVIQRTLASLLRNK---PNFLVLVIDDASDDDTAGIVR 44 (191)
T ss_pred HHHHHHHHHHHhCC---CCeEEEEEECCCCcCHHHHHh
Confidence 56677889998755 247788888777776655554
No 88
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=27.43 E-value=3.8e+02 Score=23.16 Aligned_cols=96 Identities=15% Similarity=0.061 Sum_probs=48.8
Q ss_pred EEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHh
Q 047424 71 VAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIRE 150 (379)
Q Consensus 71 I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~ 150 (379)
|+.+.++ ...+.-++.||++.+.. ...+.|+.++.++...+.+++.. ....+.+.....+ . + .+.++
T Consensus 2 iI~~~n~--~~~l~~~l~sl~~q~~~--~~eiiivD~~s~d~t~~~~~~~~----~~~~i~~~~~~~n-~-g-~~~~~-- 68 (202)
T cd04185 2 VVVTYNR--LDLLKECLDALLAQTRP--PDHIIVIDNASTDGTAEWLTSLG----DLDNIVYLRLPEN-L-G-GAGGF-- 68 (202)
T ss_pred EEEeeCC--HHHHHHHHHHHHhccCC--CceEEEEECCCCcchHHHHHHhc----CCCceEEEECccc-c-c-hhhHH--
Confidence 3445554 35577789999886542 35666666666554444444432 2122333322211 1 1 01111
Q ss_pred hhcCcchhHHhhhhhhccccCCeEEEEecceEEecchH
Q 047424 151 ALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIH 188 (379)
Q Consensus 151 ~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~ 188 (379)
+.+.-.. .....+-++++|+|.++..+.-
T Consensus 69 ------n~~~~~a---~~~~~d~v~~ld~D~~~~~~~l 97 (202)
T cd04185 69 ------YEGVRRA---YELGYDWIWLMDDDAIPDPDAL 97 (202)
T ss_pred ------HHHHHHH---hccCCCEEEEeCCCCCcChHHH
Confidence 1111111 1223789999999999987654
No 89
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=25.47 E-value=8.1e+02 Score=25.75 Aligned_cols=122 Identities=13% Similarity=0.121 Sum_probs=68.0
Q ss_pred CceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhh
Q 047424 67 SLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISS 146 (379)
Q Consensus 67 ~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~ 146 (379)
..+-|++.+=++ ..-...++.|++....- .++.++|+.++.+++..+.++++. ..+|++++.+ ...+--.++. .
T Consensus 66 p~vaIlIPA~NE-~~vI~~~l~s~L~~ldY-~~~eIiVv~d~ndd~T~~~v~~l~-~~~p~v~~vv--~~~~gp~~Ka-~ 139 (504)
T PRK14716 66 KRIAIFVPAWRE-ADVIGRMLEHNLATLDY-ENYRIFVGTYPNDPATLREVDRLA-ARYPRVHLVI--VPHDGPTSKA-D 139 (504)
T ss_pred CceEEEEeccCc-hhHHHHHHHHHHHcCCC-CCeEEEEEECCCChhHHHHHHHHH-HHCCCeEEEE--eCCCCCCCHH-H
Confidence 356666655433 44577888888765433 568898888877777677777765 4467655432 2211000110 0
Q ss_pred hhHhhhcCcchhH-Hhh-hhhh-ccccCCeEEEEecceEEecchHhHhccCCCCCeeEe
Q 047424 147 SIREALENPLNYA-RNY-LGDI-LDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIG 202 (379)
Q Consensus 147 ~i~~~~~s~~~y~-Rl~-lp~l-Lp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~a 202 (379)
. .+++ +.. -.+- -....|=++.+|+|.++..|.-.+++..+.+..++.
T Consensus 140 a--------LN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~~~~~~VQ 190 (504)
T PRK14716 140 C--------LNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLLPRHDFVQ 190 (504)
T ss_pred H--------HHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhcCCCCEEe
Confidence 0 1211 111 0010 111257899999999999998777754444333333
No 90
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=25.11 E-value=1.3e+02 Score=27.00 Aligned_cols=23 Identities=13% Similarity=0.335 Sum_probs=20.2
Q ss_pred CeEEEEecceEEecchHhHhccC
Q 047424 172 DRVIYIDSDLVLVDDIHKLWDIT 194 (379)
Q Consensus 172 ~RVLYLDsDvIV~~DI~eL~~~d 194 (379)
+.++.+.+|+++.-|+.++.+..
T Consensus 98 ~~~lv~~~D~i~~~~~~~~~~~~ 120 (221)
T cd06422 98 EPFLVVNGDILWDGDLAPLLLLH 120 (221)
T ss_pred CCEEEEeCCeeeCCCHHHHHHHH
Confidence 67999999999999999988653
No 91
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=22.66 E-value=7.7e+02 Score=24.51 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=29.4
Q ss_pred chhHHhhhhhhccccCCeEEEEecceEEecchHhH
Q 047424 156 LNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKL 190 (379)
Q Consensus 156 ~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL 190 (379)
.+|+|.+.-.+.-. .+-+|-|||-+.+..+=+++
T Consensus 103 p~~AR~la~~l~~g-E~y~LqiDSH~rF~~~WD~~ 136 (343)
T PF11397_consen 103 PCWARYLAQKLYRG-EDYYLQIDSHMRFVPGWDEI 136 (343)
T ss_pred hHHHHHHHHHHhCC-CeEEEEEeccceeeccHHHH
Confidence 48999999998876 79999999999999986553
No 92
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=21.64 E-value=5e+02 Score=28.46 Aligned_cols=45 Identities=13% Similarity=-0.002 Sum_probs=26.7
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCc
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSA 112 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~ 112 (379)
.+.|++.+=+.=..-...++.|++.-.-..+++.++|+.|+.++.
T Consensus 132 ~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~ 176 (713)
T TIGR03030 132 TVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQ 176 (713)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCcc
Confidence 567766544322222345777776543323578999998886543
No 93
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=21.51 E-value=1.2e+02 Score=30.46 Aligned_cols=174 Identities=13% Similarity=0.082 Sum_probs=87.1
Q ss_pred ccccCCeEEEEecceEEecchHhHhccCCCCC--eeEeeccccc--cCcc-cccccCCCCChhhhh--hcCCCCCcccee
Q 047424 167 LDPCVDRVIYIDSDLVLVDDIHKLWDITLTKS--KIIGAPEYCH--ANFT-KYFTDNFWSDPLLSR--VFGSRKPCYFNT 239 (379)
Q Consensus 167 Lp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~--~~~aa~e~~~--~~~~-~y~~~~~w~~~~l~~--~~~~~~~~YFNS 239 (379)
.|+ .+-+=+||.|.++.+---+|=+.-++.. ...+-+++.. .++. --.+...|+...+.. .+++.+...+|+
T Consensus 173 yP~-AeWIWWlD~DAlimn~~lsL~~~ilk~~~L~~~l~~nd~~~~~~~n~~~~~~~~~~~d~~~~~~~ii~qD~nG~na 251 (364)
T KOG4748|consen 173 YPD-AEWIWWLDQDALIMNPDLSLQDHILKPENLVTHLLRNDQKSINPLNIFRLRPRTPSLDDLEDIAFIIPQDCNGINA 251 (364)
T ss_pred CCC-CcEEEEecccchhhCcccchhHHhcCHHHHHHhhccccccccccCCccccccccccccchhhhceecccCCCCccc
Confidence 476 8999999999999985444322211100 0112221000 0000 001122244333322 234567778999
Q ss_pred eeEEEecHHHhhhhHHHHHHHHHHHh-ccccCCCCCCchHHHH------hcccCceeccccc-ccccCCCCCcccccccC
Q 047424 240 GVMVMDLVRWRKGNYRKRIENWMEIQ-RRKRIYDLGSLPPFLL------VFAGNVEAIDHRW-NQHGLGGDNVKGSCRSL 311 (379)
Q Consensus 240 GVmLinL~kwR~~~~~~~~~~~~~~~-~~~~~~~~gdqd~lN~------vf~g~i~~L~~~w-N~~~~~~~~~~~~~~~l 311 (379)
|=+|+--.+| ...++++...- -....+.+..|+++-. .+.+.|..|+.|+ |....+ .... ..
T Consensus 252 GSfLirns~~-----~~~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp~r~ins~~~~-~~~~----g~ 321 (364)
T KOG4748|consen 252 GSFLIRNSEW-----GRLLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILPLRYINSYPNG-APGY----GY 321 (364)
T ss_pred cceEEecCcc-----chhHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeeccHHHHhcCCCC-CCCC----cc
Confidence 9999854432 23333322110 0002234445655432 3467888888875 433222 1111 12
Q ss_pred CCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCCchhhhhccccccCCC
Q 047424 312 HPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHSNRIKDHHQSSVLFP 366 (379)
Q Consensus 312 ~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~~~~~~~~~~~~~~ 366 (379)
+.+ .-++||.|= |.... -.++|.+|...... ++..+.|+|
T Consensus 322 ~eg-dlvvhFaGC---~~~~~------C~~~~~~y~~~~~~-----~~~~~~~~~ 361 (364)
T KOG4748|consen 322 EEG-DLVVHFAGC---YVRNR------CLEEMEKYFNLIDN-----KQGKLYGFP 361 (364)
T ss_pred ccC-CeEEEeccc---ccHhH------HHHHHHHHHHHHHH-----hhhhhhccc
Confidence 234 479999994 65532 45888888877653 334455554
Done!