Query 047424
Match_columns 379
No_of_seqs 253 out of 1372
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 19:18:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047424.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047424hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tzt_A Glycosyl transferase fa 100.0 8.3E-49 2.8E-53 374.4 17.3 260 68-350 5-271 (276)
2 1g9r_A Glycosyl transferase; a 100.0 1.7E-44 5.9E-49 349.9 17.8 256 69-348 1-269 (311)
3 1ll2_A Glycogenin-1; protein-s 100.0 9.2E-32 3.1E-36 262.9 12.0 233 68-351 4-257 (333)
4 3u2u_A Glycogenin-1, GN-1, GN1 100.0 1.3E-30 4.4E-35 246.5 9.9 212 70-331 7-224 (263)
5 2d7i_A Polypeptide N-acetylgal 87.6 3.8 0.00013 41.8 11.8 132 36-192 86-219 (570)
6 1xhb_A Polypeptide N-acetylgal 86.9 6.2 0.00021 38.8 12.5 132 37-192 4-137 (472)
7 1qg8_A Protein (spore coat pol 75.8 13 0.00045 32.5 9.3 108 68-191 2-110 (255)
8 1o7q_A N-acetyllactosaminide a 73.9 57 0.002 30.3 16.3 204 68-298 49-262 (289)
9 3bcv_A Putative glycosyltransf 73.7 22 0.00077 30.6 10.2 100 68-191 6-106 (240)
10 2ffu_A Ppgalnact-2, polypeptid 66.2 27 0.00091 34.5 9.9 129 36-192 40-169 (501)
11 3ioh_A Histo-blood group ABO s 60.0 29 0.00099 32.4 8.1 202 67-297 58-270 (298)
12 4ayl_A BOGT-metal-independent 47.7 1.6E+02 0.0055 26.6 13.6 202 69-297 3-215 (246)
13 2z86_A Chondroitin synthase; G 38.4 1.8E+02 0.006 29.2 10.8 100 68-191 376-476 (625)
14 4hg6_A Cellulose synthase subu 37.5 1.3E+02 0.0044 31.8 9.9 45 68-112 141-185 (802)
15 2z86_A Chondroitin synthase; G 36.2 1.6E+02 0.0053 29.6 10.0 102 68-191 94-196 (625)
16 1fo8_A Alpha-1,3-mannosyl-glyc 34.4 1.2E+02 0.0041 28.7 8.2 21 171-191 100-120 (343)
No 1
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=100.00 E-value=8.3e-49 Score=374.37 Aligned_cols=260 Identities=14% Similarity=0.217 Sum_probs=186.2
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.||||+|+|++|+++++|+|+||++|+++ ++++|||+++++++++++.|++++... +.+++++.++.+.+++...
T Consensus 5 ~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~--~~~i~~~~~~~~~~~~~~~-- 79 (276)
T 3tzt_A 5 ADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLKKF--SYTLYPIRATDDLFSFAKV-- 79 (276)
T ss_dssp CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHHTT--TCEEEEEECC-----------
T ss_pred eEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHHHc--CCEEEEEEeCHHHHhcCcc--
Confidence 59999999999999999999999999985 789999999999999999999987642 4677888888765554322
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccC-cccccccCCCCChhhh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHAN-FTKYFTDNFWSDPLLS 226 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~-~~~y~~~~~w~~~~l~ 226 (379)
..+.++.+|+||++|+++|++++||||||+|+||++||++||++|++|.. +||+++|... +.+++ + .
T Consensus 80 --~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~-~aav~d~~~~~~~~~~----~-----~ 147 (276)
T 3tzt_A 80 --TDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYI-LAAASHTGKTDMANNV----N-----R 147 (276)
T ss_dssp ------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSS-EEEEEC---------------------
T ss_pred --ccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCe-EEEEEecccchHHHHH----H-----H
Confidence 23457899999999999997799999999999999999999999999654 4555555422 11111 1 0
Q ss_pred hhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCceeccc-ccccccCCCCC--
Q 047424 227 RVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDH-RWNQHGLGGDN-- 303 (379)
Q Consensus 227 ~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i~~L~~-~wN~~~~~~~~-- 303 (379)
..+ +...+||||||||||+++||+.+++++++++++++... ...+|||+||.+|.|+++.||+ +||++......
T Consensus 148 ~~l-~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~~--~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~~ 224 (276)
T 3tzt_A 148 IRL-GTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHMN--LLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSYL 224 (276)
T ss_dssp ---------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHHHGGGEEEEEHHHHSEETTCHHHHH
T ss_pred hcC-CCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhcccc--ccCCChhHHHHHHhCCEEECCchheeeecccchhhh
Confidence 011 22358999999999999999999999999999876543 3458999999999999999999 99998621100
Q ss_pred cc--cccc-cCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccC
Q 047424 304 VK--GSCR-SLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFK 350 (379)
Q Consensus 304 ~~--~~~~-~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~ 350 (379)
.. +... .....+++||||+|..|||+.... ++++++||+|....
T Consensus 225 ~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~---~~~~~~w~~Y~~~~ 271 (276)
T 3tzt_A 225 IRSKKQADLAWLMDHTVVLHFCGRDKPWKKNHR---NKFTSLYKHYMSLT 271 (276)
T ss_dssp HHTTTCCSHHHHHHHCCEEECCSSCCTTSTTCC---STTHHHHHHHHHHH
T ss_pred ccccchhhhhhhccCCeEEEECCCCCCcCCCCC---CchHHHHHHHHHHH
Confidence 00 0000 000134789999999999998643 47999999998653
No 2
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=100.00 E-value=1.7e-44 Score=349.88 Aligned_cols=256 Identities=21% Similarity=0.318 Sum_probs=193.0
Q ss_pred eeEEEEeCCcchhhHHHHHHHH-HHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSA-LKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Si-l~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
|||++|+|++|+++++|+++|| ++|++ .+++|||++++++++.++.|++++.... .++.++.++.+.+.+...+
T Consensus 1 m~I~~~~d~~Y~~~~~vli~Sl~l~~~~--~~~~f~il~~~ls~~~~~~L~~~~~~~~--~~i~~~~~~~~~~~~~~~~- 75 (311)
T 1g9r_A 1 MDIVFAADDNYAAYLCVAAKSVEAAHPD--TEIRFHVLDAGISEANRAAVAANLRGGG--GNIRFIDVNPEDFAGFPLN- 75 (311)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHTCTT--SCCEEEEEESSCCHHHHHHHHHHSGGGT--TTEEEEECCGGGGTTSCCC-
T ss_pred CeEEEECCHhHHHHHHHHHHHHHHHcCC--CCceEEEEECCCCHHHHHHHHHHHHHcC--CEEEEEEcCHHHHhcCccc-
Confidence 7999999999999999999999 88875 6799999999999999999998876543 3556677776555432211
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhhh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSR 227 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~ 227 (379)
..+.+..+|+||++|++||+ ++||||||+|+||++||++||++|++|. .+||+.+|..... +...+
T Consensus 76 --~~~~s~~~y~Rl~l~~ll~~-~~kvlyLD~D~iv~~di~eL~~~~l~~~-~~aav~d~~~~~~----------~~~~~ 141 (311)
T 1g9r_A 76 --IRHISITTYARLKLGEYIAD-CDKVLYLDIDVLVRDSLTPLWDTDLGDN-WLGASIDLFVERQ----------EGYKQ 141 (311)
T ss_dssp --CTTCCGGGGGGGGHHHHCCS-CSCEEEECSSEEECSCCHHHHTCCCTTC-SEEEEECHHHHTS----------TTHHH
T ss_pred --cccCCHHHHHHHHHHHHhhh-cCEEEEEcCCeEeccCHHHHhccCCCCc-EEEEEeccchhhh----------HHHHH
Confidence 23557789999999999985 9999999999999999999999999965 4555555532110 11122
Q ss_pred hcC-CCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCceecccccccccCCC-----
Q 047424 228 VFG-SRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGG----- 301 (379)
Q Consensus 228 ~~~-~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~~----- 301 (379)
.++ ....+||||||||||+++||+.++++++++|++++... +..+||++||.+|.|++..||++||++....
T Consensus 142 ~~~~~~~~~yfNsGv~linl~~~r~~~~~~~~~~~~~~~~~~--~~~~DQd~lN~~f~~~~~~Lp~~wN~~~~~~~~~~~ 219 (311)
T 1g9r_A 142 KIGMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDV--MQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMAN 219 (311)
T ss_dssp HTTCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTT--CSSHHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC-
T ss_pred hcCCCCCCceEeeeeeeeeHHHHHhcchHHHHHHHHHhccCc--CccCCcCHHHHHHcCCEEEcChhhccCcchhhHHhh
Confidence 222 23467999999999999999999999999999887543 4457999999999999999999999985321
Q ss_pred ----CCccccc--ccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccc
Q 047424 302 ----DNVKGSC--RSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDL 348 (379)
Q Consensus 302 ----~~~~~~~--~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~ 348 (379)
.+....+ ......+++||||+|+.|||+..+. ++..++|..|..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~---~~~~~~~~~~~~ 269 (311)
T 1g9r_A 220 WFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCT---AWGAERFTELAG 269 (311)
T ss_dssp ---CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSSSCC---STTTHHHHHHHH
T ss_pred hcccccchhhhhHHhhccCCCEEEEeCCcCCCCCCCCC---CccHHHHHHHHH
Confidence 1110111 1112346899999999999997642 345566655553
No 3
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=99.97 E-value=9.2e-32 Score=262.91 Aligned_cols=233 Identities=15% Similarity=0.257 Sum_probs=158.4
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechh--hHHhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFRED--TVINLIS 145 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~--~~~~~is 145 (379)
.+.|++++|++|+.++.|+++||++|++. .++.+ +++++++++.++.|++. +. . +..++.- .....+.
T Consensus 4 ~a~vt~~~d~~Yl~~a~vl~~SL~~~~s~-~~l~v-lv~~~is~~~~~~L~~~----~~--~--v~~v~~l~~~~~~~~~ 73 (333)
T 1ll2_A 4 QAFVTLTTNDAYAKGALVLGSSLKQHRTS-RRLAV-LTTPQVSDTMRKALEIV----FD--E--VITVDILDSGDSAHLT 73 (333)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHTTCC-SEEEE-EECTTSCHHHHHHHHHH----CS--E--EEECCTTSTTSTTHHH
T ss_pred eEEEEEEeCHHHHHHHHHHHHHHHHhCCC-CCEEE-EEcCCCCHHHHHHHHHh----CC--E--EEEEeecCCcchhhcc
Confidence 57899999999999999999999999864 44544 45668888766666654 32 2 2233321 0000011
Q ss_pred hhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhh
Q 047424 146 SSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLL 225 (379)
Q Consensus 146 ~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l 225 (379)
. .... ....+|+||+++++ ++ ++||||||+|+||++||++||+++ .++||++. .|
T Consensus 74 ~-~~~~-~~~~t~~Kl~i~~l-~~-ydrvlYLDaD~lv~~di~eLf~~~----~~aAv~d~------------~~----- 128 (333)
T 1ll2_A 74 L-MKRP-ELGVTLTKLHCWSL-TQ-YSKCVFMDADTLVLANIDDLFERE----ELSAAPDP------------GW----- 128 (333)
T ss_dssp H-HHCG-GGHHHHHHGGGGGC-TT-CSEEEEECTTEEECSCCGGGGGSC----SSEEEECS------------SS-----
T ss_pred c-cccc-chHHHHHHHHHhHh-cC-CCeEEEEeCCEEeccCHHHHhCCC----ceeEEecC------------CC-----
Confidence 0 0011 12478999999996 55 999999999999999999999986 36666552 12
Q ss_pred hhhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCc-----eecccccccccCC
Q 047424 226 SRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNV-----EAIDHRWNQHGLG 300 (379)
Q Consensus 226 ~~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i-----~~L~~~wN~~~~~ 300 (379)
++||||||||||++. ...++++++++... .+..+||++||.+|.+.+ ..||.+||++...
T Consensus 129 --------~~~fNsGvmlin~~~----~~~~~l~~~~~~~~---~~~~~DQ~~LN~~f~~~~~~~~~~~Lp~~yN~~~~~ 193 (333)
T 1ll2_A 129 --------PDCFNSGVFVYQPSV----ETYNQLLHVASEQG---SFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSIS 193 (333)
T ss_dssp --------TTSEEEEEEEECCCH----HHHHHHHHHHHHTC---CTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTH
T ss_pred --------CcceeeeEEEEeCCH----HHHHHHHHHHHhcC---CCCCCCHHHHHHHHHhhcccCccccCCcHHhccccc
Confidence 259999999999863 34466777766542 356789999999998754 8999999998532
Q ss_pred CCCcccccccCCCCCCEEEeccCCCCCCCcCCCC----------CC----CchhhhhhcccccCC
Q 047424 301 GDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNK----------QP----CPLDYLWEPYDLFKH 351 (379)
Q Consensus 301 ~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~----------~~----~~~~~lW~~Y~~~~~ 351 (379)
.......++.. ..+++||||+|+.|||+..... .+ .++.+.||+++....
T Consensus 194 ~~~~~p~~~~~-~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~~~~~~~ 257 (333)
T 1ll2_A 194 IYSYLPAFKAF-GANAKVVHFLGQTKPWNYTYDTKTKSVRSEGHDPTMTHPQFLNVWWDIFTTSV 257 (333)
T ss_dssp HHHTHHHHHHH-GGGCSEEECCSSCCGGGSCEETTTTEEC--------CCHHHHHHHHHHHHHTH
T ss_pred chhccHHHHhh-cCCCEEEEECCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHhhc
Confidence 10000011111 2357999999999999876210 01 156788999887554
No 4
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=99.96 E-value=1.3e-30 Score=246.51 Aligned_cols=212 Identities=17% Similarity=0.331 Sum_probs=145.8
Q ss_pred eEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhH
Q 047424 70 HVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIR 149 (379)
Q Consensus 70 ~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~ 149 (379)
=|.+++|++|+.++.++++||.+|++. .++.+ +++++++++.++.|++. +..+ +.+..++...-.+ ....-+
T Consensus 7 yvTl~td~~Yl~ga~vL~~SL~~~~s~-~~lvv-Lvt~~vs~~~~~~L~~~----~~~v-i~V~~l~~~~~~~-~~~~~r 78 (263)
T 3u2u_A 7 FVTLTTNDAYAKGALVLGSSLKQHRTT-RRLVV-LATPQVSDSMRKVLETV----FDEV-IMVDVLDSGDSAH-LTLMKR 78 (263)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTTCC-SEEEE-EECTTSCHHHHHHHHHH----SSEE-EECCCCCCCCHHH-HHHTTC
T ss_pred EEEEEECHHHHHHHHHHHHHHHHhCCC-CCEEE-EecCCCCHHHHHHHHHc----CCeE-EEeeecCCcchhh-hhhhcC
Confidence 456789999999999999999998863 33322 45677888777777653 3321 1111122110000 000000
Q ss_pred hhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhhhhc
Q 047424 150 EALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVF 229 (379)
Q Consensus 150 ~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~~ 229 (379)
..+ ..+|.|+.++++.+ ++||||||+|++|++||++||+++ .++|+++. .|
T Consensus 79 p~~--~~~~~kl~~~~l~~--~~~vlylD~D~~v~~~~~~Lf~~~----~~aA~~d~------------~~--------- 129 (263)
T 3u2u_A 79 PEL--GVTLTKLHCWSLTQ--YSKCVFMDADTLVLANIDDLFDRE----ELSAAPDP------------GW--------- 129 (263)
T ss_dssp TTG--GGGGGGGGGGGCTT--CSEEEEECTTEEECSCCGGGGGSC----SSEEEECT------------TS---------
T ss_pred cch--hHHhHHHHhccccC--cceEEEEcCCEeeccCHHHHhCCC----cceEeccC------------CC---------
Confidence 111 36899999999875 899999999999999999999987 36677652 12
Q ss_pred CCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhccc-----CceecccccccccCC-CCC
Q 047424 230 GSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAG-----NVEAIDHRWNQHGLG-GDN 303 (379)
Q Consensus 230 ~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g-----~i~~L~~~wN~~~~~-~~~ 303 (379)
+.||||||||||++ .+..++++++++... .+..+||++||.+|.+ .++.||.+||++... +..
T Consensus 130 ----~~~fNsGv~li~p~----~~~~~~l~~~~~~~~---~~~~~DQd~LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~ 198 (263)
T 3u2u_A 130 ----PDCFNSGVFVYQPS----VETYNQLLHLASEQG---SFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSY 198 (263)
T ss_dssp ----TTSEEEEEEEECCC----HHHHHHHHHHHHHHC---CTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEEHHHHHSS
T ss_pred ----CccccCeEEEEccc----HHHHHHHHHHHHhcC---CCCcccHHHHHHHhccccccCeeEeCCcccccccchhccc
Confidence 25999999999986 356677888877543 3567899999999988 789999999997521 111
Q ss_pred cccccccCCCCCCEEEeccCCCCCCCcC
Q 047424 304 VKGSCRSLHPGPVSLLHWSGKGKPWVRL 331 (379)
Q Consensus 304 ~~~~~~~l~~~~~~IIHf~G~~KPW~~~ 331 (379)
. ...+.. ..+++||||+|+.|||+..
T Consensus 199 ~-~~~~~~-~~~~~IIHf~g~~KPW~~~ 224 (263)
T 3u2u_A 199 L-PAFKVF-GASAKVVHFLGRVKPWNYT 224 (263)
T ss_dssp H-HHHHHH-GGGCSEEECCSSSCGGGSE
T ss_pred c-HHHHhh-cCCeEEEEECCCCcCCCCC
Confidence 1 111111 2357999999999999974
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=87.62 E-value=3.8 Score=41.76 Aligned_cols=132 Identities=16% Similarity=0.160 Sum_probs=76.5
Q ss_pred CCCcccccCCCCCCCCCCCCCccCCCCCCCCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcc-h
Q 047424 36 LGFDRFTEAPDYRNGRGCPVSANKITSSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSAS-P 114 (379)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~-~ 114 (379)
+.++..|.-|..|. ..|..... ..+...|-|++.+=+.-+..+.-+|.||++.+..+..+.+.|+.++.++.. .
T Consensus 86 d~i~l~R~~~d~r~-~~~~~~~~----~~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~ 160 (570)
T 2d7i_A 86 DKISLNRSLPDIRH-PNCNSKRY----LETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLK 160 (570)
T ss_dssp HTSCTTCCCCCCSC-GGGGTCCE----ESSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGT
T ss_pred hccCCCccCCCCCC-ccceeccc----CCCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHH
Confidence 44566676776554 24644321 011235777777655446778899999999875322357777887777777 6
Q ss_pred HHHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhc
Q 047424 115 RVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWD 192 (379)
Q Consensus 115 ~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~ 192 (379)
+.|+++... ++. ++++..+.. .++ .-+|....+... -+-|++||+|+++..+ |.+|.+
T Consensus 161 ~~l~~~~~~-~~~--v~vi~~~~n--~G~-------------~~A~N~G~~~A~--gd~i~fLD~D~~~~p~~L~~ll~ 219 (570)
T 2d7i_A 161 KPLEDYMAL-FPS--VRILRTKKR--EGL-------------IRTRMLGASVAT--GDVITFLDSHCEANVNWLPPLLD 219 (570)
T ss_dssp HHHHHHHTT-STT--EEEEECSSC--CCH-------------HHHHHHHHHHCC--SSEEEECCSSEEECTTCSHHHHH
T ss_pred HHHHHHHHh-CCe--EEEEECCCC--CCH-------------HHHHHHHHHhcC--CCEEEEEcCCccccccHHHHHHH
Confidence 777776543 454 444333211 111 122222222222 4889999999999765 444543
No 6
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=86.91 E-value=6.2 Score=38.79 Aligned_cols=132 Identities=14% Similarity=0.139 Sum_probs=71.7
Q ss_pred CCcccccCCCCCCCCCCCCCccCCCCCCCCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCC-cchH
Q 047424 37 GFDRFTEAPDYRNGRGCPVSANKITSSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDS-ASPR 115 (379)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~-~~~~ 115 (379)
.++.-|.-|..|.. .|....-. .+-..|-|++.+=+.-...+.-+|.||++.+.....+.+.|+.++.++ +..+
T Consensus 4 ~~~~~r~~~d~r~~-~c~~~~~~----~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~ 78 (472)
T 1xhb_A 4 MIALNRSLPDVRLE-GCKTKVYP----DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKR 78 (472)
T ss_dssp ----CCCCCCCSCG-GGGTCCCC----SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTH
T ss_pred cccCCCCCCCCCCh-hhccCcCC----cCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHH
Confidence 34555666666543 56543211 122357777766544446777899999997753223577777777665 3667
Q ss_pred HHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhc
Q 047424 116 VLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWD 192 (379)
Q Consensus 116 ~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~ 192 (379)
.++++... +| .+++++..+.+ .++ .-+|....+... -+-|++||+|+++..+ |.+|.+
T Consensus 79 ~l~~~~~~-~~-~~v~vi~~~~n--~G~-------------~~a~N~g~~~A~--gd~i~flD~D~~~~p~~L~~ll~ 137 (472)
T 1xhb_A 79 PLESYVKK-LK-VPVHVIRMEQR--SGL-------------IRARLKGAAVSR--GQVITFLDAHCECTAGWLEPLLA 137 (472)
T ss_dssp HHHHHHHS-SS-SCEEEEECSSC--CCH-------------HHHHHHHHHHCC--SSEEEEEESSEEECTTCHHHHHH
T ss_pred HHHHHHHH-CC-CcEEEEECCCC--CCh-------------HHHHHHHHHhcc--CCeEEEECCCeEeCccHHHHHHH
Confidence 77776543 44 12344333211 111 112222222222 4899999999998775 455544
No 7
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=75.82 E-value=13 Score=32.51 Aligned_cols=108 Identities=13% Similarity=0.109 Sum_probs=58.6
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.|-|++.+=+ -...+.-+|.||+..+. .++.+.|+.++.+++..+.++++.. .+. ++++..+..........
T Consensus 2 ~vSViIp~yn-~~~~l~~~l~Sl~~q~~--~~~eiivvDd~S~d~t~~~~~~~~~--~~~--i~~i~~~~~~~~~~~~n- 73 (255)
T 1qg8_A 2 KVSVIMTSYN-KSDYVAKSISSILSQTF--SDFELFIMDDNSNEETLNVIRPFLN--DNR--VRFYQSDISGVKERTEK- 73 (255)
T ss_dssp CEEEEEEESS-CTTTHHHHHHHHHTCSC--CCEEEEEEECSCCHHHHHHHGGGGG--STT--EEEEECCCCSHHHHHSS-
T ss_pred eEEEEEEcCC-CHHHHHHHHHHHHhccC--CceEEEEEECCCCchHHHHHHHHhh--cCC--EEEEecccccccccccc-
Confidence 3556665542 24677788999998764 3588888888777655555544322 333 44443321000000000
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLW 191 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~ 191 (379)
.-...+|...-+... -+-|++||+|.++..| |..+.
T Consensus 74 ------~G~~~a~N~gi~~a~--g~~i~~lD~Dd~~~~~~l~~~~ 110 (255)
T 1qg8_A 74 ------TRYAALINQAIEMAE--GEYITYATDDNIYMPDRLLKMV 110 (255)
T ss_dssp ------CHHHHHHHHHHHHCC--CSEEEEEETTEEECTTHHHHHH
T ss_pred ------cCHHHHHHHHHHHcC--CCEEEEeCCCCccChHHHHHHH
Confidence 001223333333333 5899999999999876 44444
No 8
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=73.86 E-value=57 Score=30.28 Aligned_cols=204 Identities=13% Similarity=0.127 Sum_probs=112.8
Q ss_pred ceeEEEEeCCcch-hhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhh
Q 047424 68 LVHVAMTLDSEYL-RGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISS 146 (379)
Q Consensus 68 ~i~I~~~~D~~Yl-~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~ 146 (379)
+|-|...+=+.|. ..+--.+.|.=+|=-..-++++||++|+.+.- -. + ...+.-++++..+..+. ...-.
T Consensus 49 tIGl~vfa~GkY~~~fl~~Fl~SAEk~Fm~g~~v~YYVFTD~~~~~-----p~-v-~l~~~r~~~V~~i~~~~--~W~d~ 119 (289)
T 1o7q_A 49 TVGLTVFAVGRYIEHYLEEFLTSANKHFMVGHPVIFYIMVDDVSRM-----PL-I-ELGPLRSFKVFKIKPEK--RWQDI 119 (289)
T ss_dssp CEEEEEEECTTHHHHHHHHHHHHHHHHBSTTSCEEEEEEESCGGGC-----CC-C-CCCTTEEEEEEECCCCS--SHHHH
T ss_pred eEEEEEEEecccHHHHHHHHHHHHHHhccCCCeEEEEEEeCChhhC-----Cc-c-ccCCCCeEEEEEecccc--CCchh
Confidence 5666666667899 88888899988886555779999999874320 00 0 11233345666554321 11111
Q ss_pred hhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccc--cccCcccccccCCCCChh
Q 047424 147 SIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEY--CHANFTKYFTDNFWSDPL 224 (379)
Q Consensus 147 ~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~--~~~~~~~y~~~~~w~~~~ 224 (379)
++++ -.++.+.-..+++.+ +|-+.++|+|+++.+++..= .|+ ..+|+... -..+ ..-|+.+. +|
T Consensus 120 sm~R----m~~i~~~~~~~~~~e-vDYLf~~dvd~~F~~~vG~E---~Lg--~lv~~lHp~~y~~~-~~~fpYER--rp- 185 (289)
T 1o7q_A 120 SMMR----MKTIGEHIVAHIQHE-VDFLFCMDVDQVFQDKFGVE---TLG--ESVAQLQAWWYKAD-PNDFTYER--RK- 185 (289)
T ss_dssp HHHH----HHHHHHHHHHTHHHH-CSEEEEECSSEEECSCBCGG---GCS--SEEEEECTTTTTSC-GGGSCCCC--CT-
T ss_pred HHHH----HHHHHHHHHHHHhhc-CCEEEEeeCCcEeeccCCHH---HHH--HHHHccCHHHhCCC-CCCCCCCC--Cc-
Confidence 1110 012233333555665 99999999999999998631 243 26666332 1111 11222211 11
Q ss_pred hhhhc--CCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccc---cCCCCCCchHHHHhc--ccCceecccccccc
Q 047424 225 LSRVF--GSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRK---RIYDLGSLPPFLLVF--AGNVEAIDHRWNQH 297 (379)
Q Consensus 225 l~~~~--~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~---~~~~~gdqd~lN~vf--~g~i~~L~~~wN~~ 297 (379)
.+..+ .+.+..|+-+|+.==-.+..-+ +++.|.+-|..-... ..|+ |.--||-.| ....+.|+++|+..
T Consensus 186 ~S~AyIp~~eGdfYY~Ga~fGGt~~~vl~--l~~~c~~~i~~D~~n~I~A~wH--DESHLNKYf~~~KPtKvLSPEY~wd 261 (289)
T 1o7q_A 186 ESAAYIPFGEGDFYYHAAIFGGTPTQVLN--ITQECFKGILKDKKNDIEAQWH--DESHLNKYFLLNKPTKILSPEYCWD 261 (289)
T ss_dssp TSTTCCCTTCCSCCEEEEEEEECHHHHHH--HHHHHHHHHHHHHHTTCCCTTT--HHHHHHHHHHHSCCSEEECGGGSBC
T ss_pred CceeeecCCCCCEEEEceeeCCcHHHHHH--HHHHHHHHHHHHHhCCeEEEec--chhhhhHHHhhcCCCEEECHHHCCC
Confidence 11122 2356778888877555554443 455555555442222 3454 455688653 45678899999876
Q ss_pred c
Q 047424 298 G 298 (379)
Q Consensus 298 ~ 298 (379)
.
T Consensus 262 ~ 262 (289)
T 1o7q_A 262 Y 262 (289)
T ss_dssp G
T ss_pred c
Confidence 3
No 9
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=73.69 E-value=22 Score=30.55 Aligned_cols=100 Identities=19% Similarity=0.242 Sum_probs=60.6
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.|-|++.+=+ -...+.-+|.||++.+. .++.+.|+.++.++...+.++++... .+.+ ++.. .++ .+ .
T Consensus 6 ~vsViIp~yn-~~~~l~~~l~Sl~~q~~--~~~eiIvvDd~S~d~t~~~~~~~~~~-~~~i--~~i~-~~n--~G-~--- 72 (240)
T 3bcv_A 6 KVSVIVPIYN-VEKYLDQCVQALLAQTL--SDIEIILIDDESPDNCPKICDDYAAQ-YPNI--KVIH-KKN--AG-L--- 72 (240)
T ss_dssp SEEEEEEESS-CTTTHHHHHHHHHTCSS--SSEEEEEEECCCSSSHHHHHHHHHHH-CSSE--EEEE-CCC--CC-H---
T ss_pred cEEEEEecCC-CHHHHHHHHHHHHhCcC--CCeEEEEEECCCCcCHHHHHHHHHhh-CCCE--EEEE-CCC--CC-h---
Confidence 4677766643 24667788999998764 45888888888777777777776543 4543 3332 111 11 1
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLW 191 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~ 191 (379)
..+|...-+... -+-|++||+|.++..+ |..|.
T Consensus 73 ---------~~a~N~g~~~a~--g~~i~~lD~Dd~~~~~~l~~l~ 106 (240)
T 3bcv_A 73 ---------GMACNSGLDVAT--GEYVAFCDSDDYVDSDMYMTMY 106 (240)
T ss_dssp ---------HHHHHHHHHHCC--SSEEEECCTTCCCCTTHHHHHH
T ss_pred ---------HHHHHHHHHHcC--CCEEEEECCCCcCCHHHHHHHH
Confidence 122222222222 4899999999998776 34444
No 10
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=66.20 E-value=27 Score=34.52 Aligned_cols=129 Identities=16% Similarity=0.122 Sum_probs=69.9
Q ss_pred CCCcccccCCCCCCCCCCCCCccCCCCCCCCCceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchH
Q 047424 36 LGFDRFTEAPDYRNGRGCPVSANKITSSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPR 115 (379)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~ 115 (379)
+.++.-|+-|..|. +.|..... ..+-..|-|++.+=+.-...+.-+|.||+..+..+..+.+.|+.++.+++..
T Consensus 40 ~~i~~~r~~~d~r~-~~~~~~~~----~~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~- 113 (501)
T 2ffu_A 40 DKLRMDRAIPDTRH-DQCQRKQW----RVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPED- 113 (501)
T ss_dssp HHSCTTCCCCCCSC-GGGGGCCC----CSSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHH-
T ss_pred cccCCCCcCCCCCh-hHhccccC----CcCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHH-
Confidence 45666677777664 35654321 1112257777766443222677889999998763223577777777665542
Q ss_pred HHHHHHHhcCCceeEEEEEechhhHHhhhhhhhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecc-hHhHhc
Q 047424 116 VLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDD-IHKLWD 192 (379)
Q Consensus 116 ~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~D-I~eL~~ 192 (379)
...+ ...+. ++++..+.. .+. ..+|....+... -+-|++||+|+++..+ |.+|.+
T Consensus 114 --~~~~-~~~~~--v~vi~~~~n--~G~-------------~~A~N~G~~~A~--gd~i~flD~D~~~~p~~L~~ll~ 169 (501)
T 2ffu_A 114 --GALL-GKIEK--VRVLRNDRR--EGL-------------MRSRVRGADAAQ--AKVLTFLDSHCECNEHWLEPLLE 169 (501)
T ss_dssp --HHGG-GGBTT--EEEEECSSC--CHH-------------HHHHHHHHHHCC--SSEEEECCSSEEECTTCHHHHHH
T ss_pred --HHHH-hcCCC--EEEEECCCC--cCH-------------HHHHHHHHHhcC--CCEEEEECCCcccCccHHHHHHH
Confidence 2333 23454 344333221 111 122222222232 4889999999999765 455544
No 11
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=59.97 E-value=29 Score=32.42 Aligned_cols=202 Identities=12% Similarity=0.146 Sum_probs=108.5
Q ss_pred CceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhh
Q 047424 67 SLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISS 146 (379)
Q Consensus 67 ~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~ 146 (379)
-+|-+++.+=+.|+..+.-.+.|.-+|=-...++++||++|+.+. +..+ ...+.-++++..+..+ ......
T Consensus 58 ~tIGl~vfA~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~~~~-----vP~v--~l~~~r~~~V~~v~~~--~~Wqd~ 128 (298)
T 3ioh_A 58 TTIGLTVFAIKKYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPAA-----VPRV--TLGTGRQLSVLEVRAY--KRWQDV 128 (298)
T ss_dssp CEEEEEEEECGGGGGGHHHHHHHHHHHBSTTSEEEEEEEESCGGG-----SCCC--CCCTTEEEEEEECCCC--SSHHHH
T ss_pred CcEEEEEEEeCcHHHHHHHHHHhHHHhccCCceEEEEEEeCChhh-----CCcc--ccCCCCeEEEEEeccc--cCCccc
Confidence 356666667778999999999999998766678999999987432 1000 1123445666555321 011001
Q ss_pred hhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCc----ccccccCCCCC
Q 047424 147 SIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANF----TKYFTDNFWSD 222 (379)
Q Consensus 147 ~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~----~~y~~~~~w~~ 222 (379)
++++ -.++..+-...++.+ +|-+..+|+|+++.+++..= .|+ ..+|+.. +.+ .+-|+.+. +
T Consensus 129 sm~R----m~~i~~~~~~~~~~E-vDyLfc~dvd~~F~~~vG~E---~Lg--~lva~lH---p~~y~~~~~~FpYER--r 193 (298)
T 3ioh_A 129 SMRR----MEMISDFCERRFLSE-VDYLVCVDVDMEFRDHVGVE---ILT--PLFGTLH---PGFYGSSREAFTYER--R 193 (298)
T ss_dssp HHHH----HHHHHHHHHHTHHHH-CSEEEEEESSEEECSCBCGG---GCS--SEEEEBC---TTTTTSCGGGSCCCC--C
T ss_pred cHHH----HHHHHHHHHHHHhhc-CCEEEEecCCCeeccCccHH---HhH--hhHhhcC---hhhhcCCcccCcccC--C
Confidence 1110 012222222345555 99999999999999998731 133 2456532 211 11122111 1
Q ss_pred hhhhhhcC--CCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccc---cCCCCCCchHHHHhc--ccCceecccccc
Q 047424 223 PLLSRVFG--SRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRK---RIYDLGSLPPFLLVF--AGNVEAIDHRWN 295 (379)
Q Consensus 223 ~~l~~~~~--~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~---~~~~~gdqd~lN~vf--~g~i~~L~~~wN 295 (379)
|. +..+. +.+..|+-+|+.==-.....+ +++.|.+-+..-... ..|+ |.--||..| ....+.|+++|+
T Consensus 194 p~-S~AyIp~~eGdfYY~ga~fGGt~~~vl~--Lt~~C~~~i~~D~~n~IeA~Wh--DESHLNKYfl~hKPtKvLSPEY~ 268 (298)
T 3ioh_A 194 PQ-SQAYIPKDEGDFYYGGAFFGGSVQEVQR--LTRACHQAMMVDQANGIEAVWH--DESHLNKYLLRHKPTKVLSPEYL 268 (298)
T ss_dssp TT-STTCCCTTCCSCCBCTTEEEEEHHHHHH--HHHHHHHHHHHHHHTTCCCTTT--HHHHHHHHHHHSCCSEEECGGGS
T ss_pred cc-ccccccCCCCCeEEeeeecCCcHHHHHH--HHHHHHHHHHHHHhCCceEecc--chhhhhhhhhhcCCCceeCHHHc
Confidence 11 11221 344567666655433333322 445554444432222 3454 345688654 455799999988
Q ss_pred cc
Q 047424 296 QH 297 (379)
Q Consensus 296 ~~ 297 (379)
..
T Consensus 269 Wd 270 (298)
T 3ioh_A 269 WD 270 (298)
T ss_dssp BC
T ss_pred CC
Confidence 64
No 12
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=47.74 E-value=1.6e+02 Score=26.62 Aligned_cols=202 Identities=10% Similarity=0.065 Sum_probs=100.5
Q ss_pred eeEEEEeCCcchhhHHHHHHHHHHhcCCCCc--EEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhh
Q 047424 69 VHVAMTLDSEYLRGSIAAVHSALKHASCPEN--IFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISS 146 (379)
Q Consensus 69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~--i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~ 146 (379)
|-|++.+=+.|...+.-.+.|.-+|=-...+ ++++|++|+.+.-. . . ... .+.+. .... ......
T Consensus 3 IGl~vfA~GkY~~fl~~Fl~SAek~Fm~g~~~~V~yYVFTD~~~~vp-----~-~--~~~--~v~~~-~~~~--~~Wqd~ 69 (246)
T 4ayl_A 3 IGILYICTGKYDIFWKDFYLSAERYFMQDQSFIIEYYVFTDSPKLYD-----E-E--NNK--HIHRI-KQKN--LGWPDN 69 (246)
T ss_dssp EEEEEECCGGGGGGHHHHHHHHHHHBSCSTTSEEEEEEEESCSCCTT-----T-T--TCT--TEEEE-ECCC--CCTTHH
T ss_pred EEEEEEEeCcHHHHHHHHHHhHHHhccCCCccceEEEEEeCChhhCC-----c-C--CCc--eEEEE-eCCc--CCCccc
Confidence 5566666678998999999999998876688 99999999755310 0 0 011 22221 1111 000000
Q ss_pred hhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccc--cccCcccccccCCCCChh
Q 047424 147 SIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEY--CHANFTKYFTDNFWSDPL 224 (379)
Q Consensus 147 ~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~--~~~~~~~y~~~~~w~~~~ 224 (379)
++++ -.++.+. ...+.. ++|-+..+|+|+++.+++..=-=++.+++..+|+... -..+ .+-|+.+. +|
T Consensus 70 sm~R----m~~i~~~-~~~~~~-evDyLf~~dvd~~F~~~vG~E~L~p~~~~~lva~lHp~~y~~~-~~~fpYER--rp- 139 (246)
T 4ayl_A 70 TLKR----FHIFLRI-KEQLER-ETDYLFFFNANLLFTSPIGKEILPPSDSNGLLGTMHPGFYNKP-NSEFTYER--RD- 139 (246)
T ss_dssp HHTH----HHHHHTT-HHHHHH-HCSEEEEECTTEEECSCBCGGGSCCTTSCCEEEEBCGGGC-----------------
T ss_pred chHH----HHHHHHH-HHHHHh-hCCEEEEEeCCceeeccCCHHHcccCCCCCEEEEechhhhCCC-cccCcccC--Cc-
Confidence 1110 0122222 334444 4999999999999999997311123343456776332 0000 01111111 11
Q ss_pred hhhhcC--CCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccc---cCCCCCCchHHHHhcc-cCce-ecccccccc
Q 047424 225 LSRVFG--SRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRK---RIYDLGSLPPFLLVFA-GNVE-AIDHRWNQH 297 (379)
Q Consensus 225 l~~~~~--~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~---~~~~~gdqd~lN~vf~-g~i~-~L~~~wN~~ 297 (379)
.+..+. +.+..|+-+|+.==-.....+ +++.|.+-+..-..+ ..|+ |.--||-.|- .+-. .|+++|+.-
T Consensus 140 ~S~AyIp~~eGdfYY~ga~fGG~~~~vl~--Lt~~c~~~i~~D~~n~I~A~wh--DESHLNKYfl~~KP~~vLSPEY~wd 215 (246)
T 4ayl_A 140 ASTAYIPEGEGRYYYAGGLSGGCTKAYLK--LCTTICSWVDRDATNHIIPIWH--DESLINKYFLDNPPAITLSPAYLYP 215 (246)
T ss_dssp -----------CCCBCSSEEEEEHHHHHH--HHHHHHHHHHHHHTTCSSCSCC--HHHHHHHHHHHSCCSEEECGGGGEE
T ss_pred cccccccCCCCCeEEeeeecCCcHHHHHH--HHHHHHHHHHHHHhCCceEecc--chhHhHHHHHhCCCCeeeCHHHcCC
Confidence 111121 234567766665444443333 455555555443322 3454 3456887542 3344 599999875
No 13
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=38.40 E-value=1.8e+02 Score=29.22 Aligned_cols=100 Identities=17% Similarity=0.123 Sum_probs=59.6
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.|-|++.+=+ -...+.-+|.|++..+- .++.+.|+.++.++...+.+++... ..+.+. +.. ..+ .+ ++
T Consensus 376 ~vsiii~~yn-~~~~l~~~l~s~~~q~~--~~~eiivvdd~S~d~t~~~~~~~~~-~~~~i~--~~~-~~n--~G-~~-- 443 (625)
T 2z86_A 376 LVSIYIPAYN-CSKYIVRCVESALNQTI--TDLEVCICDDGSTDDTLRILQEHYA-NHPRVR--FIS-QKN--KG-IG-- 443 (625)
T ss_dssp SEEEEEEESS-CTTTHHHHHHHHHSSSC--CSEEEEEEEESCSSSHHHHHHHHHT-TCTTEE--EEE-ECC--CC-HH--
T ss_pred eEEEEEeCCC-CHHHHHHHHHHHHhCcC--CCeEEEEEECcCChhHHHHHHHHHh-hCCcEE--EEe-CCC--CC-HH--
Confidence 5777776643 25677888999998764 4588888888877777777766543 345443 322 111 11 11
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecch-HhHh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDI-HKLW 191 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI-~eL~ 191 (379)
.+|...-+... -+-|++||+|.++..+- .++.
T Consensus 444 ----------~a~n~g~~~a~--g~~i~~ld~D~~~~~~~l~~~~ 476 (625)
T 2z86_A 444 ----------SASNTAVRLCR--GFYIGQLDSDDFLEPDAVELCL 476 (625)
T ss_dssp ----------HHHHHHHHHCC--SSEEEECCTTCEECTTHHHHHH
T ss_pred ----------HHHHHHHHhcC--CCEEEEECCCcccChhHHHHHH
Confidence 11111111222 47899999999987763 4443
No 14
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=37.54 E-value=1.3e+02 Score=31.80 Aligned_cols=45 Identities=7% Similarity=-0.167 Sum_probs=28.9
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCc
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSA 112 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~ 112 (379)
.+-|++.+=+.-..-+..++.|+++..-.++.+.++|+.|+.+++
T Consensus 141 ~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~ 185 (802)
T 4hg6_A 141 TVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQ 185 (802)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHH
T ss_pred cEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcc
Confidence 567777764332233367899998765433558888888876544
No 15
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=36.22 E-value=1.6e+02 Score=29.62 Aligned_cols=102 Identities=9% Similarity=-0.003 Sum_probs=57.8
Q ss_pred ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424 68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS 147 (379)
Q Consensus 68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~ 147 (379)
.|.|++.+=+. ...+..++.|++..... ..+.++|+.++.+++..+.++++. ....+.+..-... +. .
T Consensus 94 ~vsviIp~~n~-~~~l~~~l~sl~~q~~~-~~~eiivvDd~s~d~t~~~~~~~~----~~~~i~~i~~~~~---~~-g-- 161 (625)
T 2z86_A 94 GLSIVIPTYNR-AKILAITLACLCNQKTI-YDYEVIVADDGSKENIEEIVREFE----SLLNIKYVRQKDY---GY-Q-- 161 (625)
T ss_dssp CEEEEEEESSC-HHHHHHHHHHHHTCCCS-SCEEEEEEEESCSSCHHHHHHTTT----TTSCEEEEEECCC---SC-C--
T ss_pred cEEEEEecCCc-HHHHHHHHHHHHhhccC-CCeEEEEEeCCCchhHHHHHHHhh----hcCCeEEEEeCCC---Cc-c--
Confidence 56777766433 56778899999987542 368888888887766555554432 1123443322211 10 0
Q ss_pred hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecch-HhHh
Q 047424 148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDI-HKLW 191 (379)
Q Consensus 148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI-~eL~ 191 (379)
...+|...-+... -+-|+++|+|.++..+. ..+.
T Consensus 162 --------~~~a~N~g~~~a~--g~~v~~lD~D~~~~~~~l~~~~ 196 (625)
T 2z86_A 162 --------LCAVRNLGLRAAK--YNYVAILDCDMAPNPLWVQSYM 196 (625)
T ss_dssp --------HHHHHHHHHHHCC--SSEEEEECTTEEECTTHHHHHH
T ss_pred --------hhHHHHHHHHhCC--cCEEEEECCCCCCCHHHHHHHH
Confidence 0112222222222 58999999999997653 4443
No 16
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=34.41 E-value=1.2e+02 Score=28.73 Aligned_cols=21 Identities=14% Similarity=0.388 Sum_probs=18.2
Q ss_pred CCeEEEEecceEEecchHhHh
Q 047424 171 VDRVIYIDSDLVLVDDIHKLW 191 (379)
Q Consensus 171 ~~RVLYLDsDvIV~~DI~eL~ 191 (379)
.++||.||.|+++--|.=+-+
T Consensus 100 ~~~vIiLEDDl~~spdF~~y~ 120 (343)
T 1fo8_A 100 YPAAVVVEDDLEVAPDFFEYF 120 (343)
T ss_dssp CSEEEEEETTEEECTTHHHHH
T ss_pred CCEEEEEcCCCeECHHHHHHH
Confidence 799999999999999876543
Done!