BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047426
(109 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGVE-----KDDITKALA 55
+T+ W+S+LE + GVPM + P + +Q L L L IGVGV+ K+ I KAL
Sbjct: 350 LTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALE 409
Query: 56 ELMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLIS 100
M S+ MR K ++A KAVE+ G+S D L++ + S
Sbjct: 410 LTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGV----GVEKDDITKALAE 56
+T+ W+S ES+ AGVPM WP + +Q + + + IG+ V+++++ K + E
Sbjct: 376 LTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINE 435
Query: 57 LMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLI 99
++ M+ K K A + GG S+ +LN +++D++
Sbjct: 436 VIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGVEKD-----------DITKAL 54
W+SILES+ GVP+ TWP+Y EQ L + +G+G+ D +I K L
Sbjct: 360 WNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGL 419
Query: 55 AELMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDL 98
+LM S + K + + +R AV +GGSS + L++D+
Sbjct: 420 KDLMDKDSI--VHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGVEKD-----------DITKAL 54
W+SILES+ GVP+ TWP+Y EQ L + +G+G+ D +I K L
Sbjct: 360 WNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGL 419
Query: 55 AELMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDL 98
+LM S + K + + +R AV +GGSS + L++D+
Sbjct: 420 KDLMDKDSI--VHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGVEKDDITKA-----LA 55
+T+ W+S+ ESVA GVP+ P + +Q L ++V D L IGV +E TK+
Sbjct: 348 VTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFD 407
Query: 56 ELMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLIS 100
+++ + +R + +TA +AV GSS + L+ DL+S
Sbjct: 408 QILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLV-DLVS 451
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTD----ALRIGVG----VEKDDITK 52
+T+ W+S LESV +G+P+ WPLY EQ + L+++ ALR G V ++++ +
Sbjct: 362 LTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVAR 421
Query: 53 ALAELMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLN 92
+ LM + +RNK K + A + +++ G+S L+
Sbjct: 422 VVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALS 461
>pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|B Chain B, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|C Chain C, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|D Chain D, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|E Chain E, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|F Chain F, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|G Chain G, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|H Chain H, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
Length = 401
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 72 GPGKTARKAVEEGGSSFSDL 91
GP RKA+E G SFSDL
Sbjct: 297 GPVPATRKALERAGLSFSDL 316
>pdb|2BMB|A Chain A, X-Ray Structure Of The Bifunctional 6-Hydroxymethyl-7,8-
Dihydroxypterin Pyrophosphokinase Dihydropteroate
Synthase From Saccharomyces Cerevisiae
Length = 545
Score = 25.0 bits (53), Expect = 9.7, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 80 AVEEGGSSFSDLNALLEDLISIC 102
+ +GG F+D+ + L D+I +C
Sbjct: 237 SFSDGGEHFADIESQLNDIIKLC 259
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.311 0.128 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,923,957
Number of Sequences: 62578
Number of extensions: 91629
Number of successful extensions: 217
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 205
Number of HSP's gapped (non-prelim): 9
length of query: 109
length of database: 14,973,337
effective HSP length: 73
effective length of query: 36
effective length of database: 10,405,143
effective search space: 374585148
effective search space used: 374585148
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 45 (21.9 bits)