Query 047426
Match_columns 109
No_of_seqs 136 out of 1090
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 10:57:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047426.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047426hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02555 limonoid glucosyltran 100.0 4.4E-31 9.5E-36 208.6 11.3 102 1-102 360-471 (480)
2 PLN02410 UDP-glucoronosyl/UDP- 100.0 5.7E-31 1.2E-35 206.7 11.2 100 1-100 347-450 (451)
3 PLN02210 UDP-glucosyl transfer 100.0 7.9E-31 1.7E-35 206.0 10.5 99 1-99 347-454 (456)
4 PLN02207 UDP-glycosyltransfera 100.0 1.3E-30 2.9E-35 205.4 11.0 101 1-102 355-467 (468)
5 PLN02173 UDP-glucosyl transfer 100.0 1.4E-30 3E-35 204.4 10.8 99 1-99 340-447 (449)
6 PLN02534 UDP-glycosyltransfera 100.0 9E-30 1.9E-34 201.6 11.4 102 1-102 367-488 (491)
7 PLN00164 glucosyltransferase; 100.0 7.5E-30 1.6E-34 201.6 10.8 101 1-101 362-474 (480)
8 PLN03007 UDP-glucosyltransfera 100.0 9.1E-30 2E-34 201.0 11.0 101 1-101 368-481 (482)
9 PLN03015 UDP-glucosyl transfer 100.0 9E-30 1.9E-34 200.7 10.5 99 1-99 358-467 (470)
10 PLN02448 UDP-glycosyltransfera 100.0 2.2E-29 4.7E-34 197.8 11.0 100 1-100 346-457 (459)
11 PLN02992 coniferyl-alcohol glu 100.0 3.4E-29 7.4E-34 197.9 11.3 101 1-101 361-470 (481)
12 PLN02863 UDP-glucoronosyl/UDP- 100.0 3.9E-29 8.4E-34 197.4 10.8 100 1-102 366-473 (477)
13 PLN02554 UDP-glycosyltransfera 100.0 5E-29 1.1E-33 196.8 10.7 99 1-101 365-479 (481)
14 PLN02167 UDP-glycosyltransfera 100.0 8.1E-29 1.8E-33 195.4 10.6 100 1-102 363-474 (475)
15 PLN02152 indole-3-acetate beta 100.0 6.9E-29 1.5E-33 195.1 10.1 98 1-99 350-455 (455)
16 PLN02562 UDP-glycosyltransfera 100.0 2.4E-28 5.3E-33 191.6 10.1 95 1-99 351-448 (448)
17 PLN02208 glycosyltransferase f 100.0 3.9E-28 8.4E-33 190.3 11.1 97 1-101 334-440 (442)
18 PLN02764 glycosyltransferase f 99.9 1.6E-27 3.5E-32 187.2 10.9 101 1-105 340-450 (453)
19 PLN00414 glycosyltransferase f 99.9 2.8E-26 6E-31 180.0 10.7 101 1-105 335-445 (446)
20 PLN03004 UDP-glycosyltransfera 99.9 8.4E-27 1.8E-31 183.2 7.4 86 1-89 357-450 (451)
21 PLN02670 transferase, transfer 99.9 2.9E-25 6.2E-30 175.3 10.1 97 1-102 362-467 (472)
22 PF00201 UDPGT: UDP-glucoronos 99.9 8.4E-23 1.8E-27 160.3 6.2 77 1-81 346-427 (500)
23 KOG1192 UDP-glucuronosyl and U 99.8 1.6E-20 3.5E-25 146.8 9.1 76 1-79 359-438 (496)
24 PHA03392 egt ecdysteroid UDP-g 99.8 6.9E-20 1.5E-24 145.8 10.4 95 1-102 369-468 (507)
25 COG1819 Glycosyl transferases, 99.7 1E-16 2.2E-21 124.8 10.3 90 1-99 305-399 (406)
26 TIGR01426 MGT glycosyltransfer 99.6 2.8E-15 6E-20 114.7 9.8 76 1-80 296-376 (392)
27 cd03784 GT1_Gtf_like This fami 99.6 3.9E-15 8.4E-20 113.7 9.0 73 1-78 309-386 (401)
28 PRK12446 undecaprenyldiphospho 99.0 1.1E-09 2.4E-14 83.8 6.2 69 1-72 257-335 (352)
29 PF04101 Glyco_tran_28_C: Glyc 98.9 3.5E-10 7.6E-15 77.5 2.2 60 1-61 77-145 (167)
30 PF13528 Glyco_trans_1_3: Glyc 98.9 1.9E-09 4.1E-14 80.0 5.1 56 1-57 255-317 (318)
31 TIGR00661 MJ1255 conserved hyp 98.8 4.2E-09 9.1E-14 79.1 4.6 57 1-59 252-310 (321)
32 PRK00726 murG undecaprenyldiph 98.7 1.5E-07 3.3E-12 70.9 8.3 60 1-61 257-325 (357)
33 COG0707 MurG UDP-N-acetylgluco 98.4 7.6E-07 1.6E-11 68.8 6.8 60 1-61 257-325 (357)
34 PRK13608 diacylglycerol glucos 98.2 8.5E-06 1.8E-10 62.9 9.0 93 2-102 279-373 (391)
35 cd03785 GT1_MurG MurG is an N- 98.1 7.1E-06 1.5E-10 61.2 6.4 60 1-61 257-325 (350)
36 TIGR01133 murG undecaprenyldip 98.0 2.2E-05 4.7E-10 58.6 7.3 60 1-61 255-322 (348)
37 PRK13609 diacylglycerol glucos 98.0 6.3E-05 1.4E-09 57.3 9.2 59 2-61 279-339 (380)
38 PLN02605 monogalactosyldiacylg 98.0 6.9E-05 1.5E-09 57.5 9.2 58 2-60 288-347 (382)
39 TIGR00215 lpxB lipid-A-disacch 97.5 0.00036 7.8E-09 54.0 7.0 90 3-94 274-382 (385)
40 PRK05749 3-deoxy-D-manno-octul 97.4 0.0015 3.3E-08 50.6 9.4 56 5-61 333-389 (425)
41 PRK00025 lpxB lipid-A-disaccha 97.1 0.0047 1E-07 46.8 8.5 57 3-61 268-342 (380)
42 TIGR03492 conserved hypothetic 97.0 0.0051 1.1E-07 48.0 8.2 58 2-61 302-365 (396)
43 PRK09814 beta-1,6-galactofuran 96.8 0.0091 2E-07 45.1 7.8 77 9-95 253-330 (333)
44 cd03814 GT1_like_2 This family 96.7 0.02 4.3E-07 41.7 8.9 51 6-61 280-333 (364)
45 cd03801 GT1_YqgM_like This fam 96.5 0.027 5.9E-07 40.3 8.5 53 4-61 287-342 (374)
46 cd05844 GT1_like_7 Glycosyltra 96.4 0.016 3.5E-07 43.0 6.9 51 6-61 284-337 (367)
47 cd03807 GT1_WbnK_like This fam 96.3 0.036 7.9E-07 40.0 8.1 51 6-61 282-333 (365)
48 cd04946 GT1_AmsK_like This fam 96.2 0.021 4.6E-07 44.3 7.0 79 6-95 324-406 (407)
49 cd03820 GT1_amsD_like This fam 96.2 0.041 8.9E-07 39.4 8.0 52 6-61 266-320 (348)
50 COG4671 Predicted glycosyl tra 96.2 0.012 2.7E-07 45.8 5.3 58 1-59 299-364 (400)
51 KOG3349 Predicted glycosyltran 96.2 0.0076 1.7E-07 41.8 3.7 55 1-56 85-143 (170)
52 cd03798 GT1_wlbH_like This fam 96.1 0.058 1.3E-06 38.8 8.4 52 5-61 291-345 (377)
53 PF13524 Glyco_trans_1_2: Glyc 95.9 0.06 1.3E-06 32.9 6.8 78 6-95 12-91 (92)
54 cd03823 GT1_ExpE7_like This fa 95.8 0.11 2.4E-06 37.6 8.7 51 6-61 277-330 (359)
55 TIGR03088 stp2 sugar transfera 95.8 0.094 2E-06 39.4 8.6 51 6-61 286-339 (374)
56 cd03795 GT1_like_4 This family 95.8 0.052 1.1E-06 39.8 7.0 51 7-61 280-333 (357)
57 PF00534 Glycos_transf_1: Glyc 95.8 0.027 5.9E-07 37.7 5.1 52 5-61 105-159 (172)
58 PRK15427 colanic acid biosynth 95.7 0.088 1.9E-06 40.9 8.5 82 7-99 319-404 (406)
59 cd03825 GT1_wcfI_like This fam 95.7 0.067 1.5E-06 39.3 7.4 51 6-61 278-331 (365)
60 PRK09922 UDP-D-galactose:(gluc 95.7 0.12 2.7E-06 39.0 8.9 65 6-75 271-342 (359)
61 TIGR00236 wecB UDP-N-acetylglu 95.6 0.037 8.1E-07 41.9 5.9 49 8-61 285-335 (365)
62 cd04962 GT1_like_5 This family 95.6 0.09 1.9E-06 39.1 7.8 51 6-61 284-337 (371)
63 cd03794 GT1_wbuB_like This fam 95.6 0.055 1.2E-06 39.3 6.5 51 6-61 313-366 (394)
64 cd03808 GT1_cap1E_like This fa 95.5 0.078 1.7E-06 38.1 7.1 51 6-61 277-330 (359)
65 cd03822 GT1_ecORF704_like This 95.5 0.1 2.2E-06 38.1 7.7 50 6-61 283-335 (366)
66 cd03800 GT1_Sucrose_synthase T 95.5 0.083 1.8E-06 39.5 7.2 50 7-61 317-369 (398)
67 PF13844 Glyco_transf_41: Glyc 95.4 0.14 3.1E-06 41.2 8.7 21 3-23 371-391 (468)
68 TIGR03087 stp1 sugar transfera 95.4 0.11 2.4E-06 39.8 7.7 51 5-61 310-363 (397)
69 TIGR02149 glgA_Coryne glycogen 95.3 0.2 4.4E-06 37.6 8.8 50 7-61 295-353 (388)
70 cd03816 GT1_ALG1_like This fam 95.3 0.06 1.3E-06 41.9 6.0 64 6-74 331-399 (415)
71 cd04949 GT1_gtfA_like This fam 95.2 0.074 1.6E-06 39.9 6.3 64 6-73 292-359 (372)
72 PRK15484 lipopolysaccharide 1, 95.1 0.2 4.3E-06 38.5 8.6 82 7-100 292-377 (380)
73 cd03818 GT1_ExpC_like This fam 95.1 0.071 1.5E-06 40.8 6.1 50 7-61 315-367 (396)
74 cd03821 GT1_Bme6_like This fam 95.0 0.15 3.1E-06 37.0 7.0 50 6-61 295-346 (375)
75 cd03817 GT1_UGDG_like This fam 94.9 0.12 2.5E-06 37.5 6.5 52 5-61 291-344 (374)
76 cd04951 GT1_WbdM_like This fam 94.9 0.19 4.1E-06 36.8 7.5 50 6-60 276-326 (360)
77 COG1519 KdtA 3-deoxy-D-manno-o 94.8 0.15 3.3E-06 40.4 7.2 57 3-61 330-387 (419)
78 TIGR02472 sucr_P_syn_N sucrose 94.8 0.23 4.9E-06 38.9 8.2 50 7-61 355-407 (439)
79 COG5017 Uncharacterized conser 94.8 0.018 3.8E-07 39.5 1.7 24 1-24 70-93 (161)
80 PRK10307 putative glycosyl tra 94.6 0.33 7.1E-06 37.2 8.6 84 7-101 322-408 (412)
81 TIGR02918 accessory Sec system 94.1 0.35 7.5E-06 39.0 8.0 63 6-72 406-479 (500)
82 cd03804 GT1_wbaZ_like This fam 94.1 0.077 1.7E-06 39.5 4.1 50 7-61 275-327 (351)
83 cd03799 GT1_amsK_like This is 94.1 0.24 5.2E-06 36.3 6.6 51 6-61 275-328 (355)
84 cd03809 GT1_mtfB_like This fam 94.0 0.18 3.8E-06 36.8 5.6 51 6-61 286-337 (365)
85 cd03819 GT1_WavL_like This fam 93.7 0.32 7E-06 35.7 6.7 49 6-59 278-329 (355)
86 cd03792 GT1_Trehalose_phosphor 93.4 0.69 1.5E-05 34.9 8.1 51 6-61 287-338 (372)
87 cd03811 GT1_WabH_like This fam 93.2 0.59 1.3E-05 33.3 7.1 51 6-61 277-333 (353)
88 TIGR03449 mycothiol_MshA UDP-N 93.1 1 2.2E-05 34.2 8.7 50 7-61 317-369 (405)
89 cd03813 GT1_like_3 This family 93.0 0.6 1.3E-05 37.0 7.6 52 6-61 384-443 (475)
90 cd04955 GT1_like_6 This family 92.8 0.42 9E-06 35.1 6.1 78 7-96 283-360 (363)
91 PRK14089 ipid-A-disaccharide s 92.8 0.86 1.9E-05 35.3 7.9 33 2-36 241-275 (347)
92 cd03796 GT1_PIG-A_like This fa 92.7 0.9 2E-05 34.8 8.0 49 7-60 284-333 (398)
93 cd03805 GT1_ALG2_like This fam 92.7 0.43 9.3E-06 35.9 6.1 50 7-61 314-365 (392)
94 PHA01633 putative glycosyl tra 92.6 0.47 1E-05 36.6 6.2 54 7-60 238-307 (335)
95 cd03812 GT1_CapH_like This fam 92.4 0.39 8.5E-06 35.3 5.5 50 6-61 280-332 (358)
96 PLN02871 UDP-sulfoquinovose:DA 92.3 1.6 3.5E-05 34.3 9.1 51 6-61 345-401 (465)
97 PF02684 LpxB: Lipid-A-disacch 91.8 2.5 5.4E-05 33.1 9.4 80 8-90 271-367 (373)
98 TIGR02468 sucrsPsyn_pln sucros 91.7 1.4 3E-05 38.9 8.6 82 7-101 586-671 (1050)
99 PHA01630 putative group 1 glyc 91.1 1.1 2.5E-05 34.0 6.9 55 6-60 223-294 (331)
100 PLN02949 transferase, transfer 91.0 1.2 2.7E-05 35.6 7.2 51 7-60 369-422 (463)
101 PF13692 Glyco_trans_1_4: Glyc 90.4 0.2 4.3E-06 32.2 1.8 49 6-60 85-135 (135)
102 cd04950 GT1_like_1 Glycosyltra 90.1 3.4 7.3E-05 31.5 8.7 47 7-61 293-341 (373)
103 cd03786 GT1_UDP-GlcNAc_2-Epime 90.0 0.45 9.8E-06 35.5 3.8 53 3-61 284-338 (363)
104 PRK10017 colanic acid biosynth 89.2 3 6.6E-05 33.1 8.0 69 6-78 336-412 (426)
105 KOG4626 O-linked N-acetylgluco 88.9 1.6 3.5E-05 37.0 6.3 21 5-25 847-867 (966)
106 COG0763 LpxB Lipid A disacchar 88.9 5 0.00011 31.7 8.8 87 8-98 275-379 (381)
107 COG3914 Spy Predicted O-linked 88.2 2.5 5.5E-05 35.1 7.0 38 3-44 518-557 (620)
108 COG3980 spsG Spore coat polysa 88.1 1.6 3.4E-05 33.4 5.4 56 5-61 235-294 (318)
109 PLN02275 transferase, transfer 87.5 1.1 2.4E-05 34.2 4.5 48 6-58 323-371 (371)
110 PRK14098 glycogen synthase; Pr 86.3 2.5 5.4E-05 33.9 6.0 50 7-59 396-450 (489)
111 cd03802 GT1_AviGT4_like This f 86.0 3.6 7.9E-05 29.8 6.4 48 7-59 259-307 (335)
112 PRK15490 Vi polysaccharide bio 85.2 8 0.00017 32.2 8.4 44 6-54 486-532 (578)
113 TIGR03713 acc_sec_asp1 accesso 84.6 1.5 3.3E-05 35.7 4.1 49 5-61 440-489 (519)
114 TIGR02400 trehalose_OtsA alpha 84.2 12 0.00025 30.0 8.9 80 5-98 367-454 (456)
115 PF04558 tRNA_synt_1c_R1: Glut 83.9 1.5 3.3E-05 30.5 3.3 31 30-60 102-132 (164)
116 PLN00142 sucrose synthase 83.7 13 0.00029 32.2 9.4 47 7-58 681-730 (815)
117 TIGR02470 sucr_synth sucrose s 83.5 9.9 0.00021 32.8 8.5 47 7-58 658-707 (784)
118 cd03791 GT1_Glycogen_synthase_ 83.0 3.4 7.4E-05 32.3 5.4 49 7-59 385-441 (476)
119 TIGR02095 glgA glycogen/starch 82.7 6.2 0.00013 31.1 6.7 49 7-59 380-436 (473)
120 PLN02846 digalactosyldiacylgly 82.2 6.9 0.00015 31.5 6.9 50 6-61 314-364 (462)
121 PRK15179 Vi polysaccharide bio 81.1 8.6 0.00019 32.6 7.3 49 6-59 605-658 (694)
122 PRK00654 glgA glycogen synthas 80.0 5 0.00011 31.7 5.4 52 7-59 371-427 (466)
123 PRK10353 3-methyl-adenine DNA 78.5 17 0.00038 25.9 7.2 72 21-95 22-120 (187)
124 TIGR02919 accessory Sec system 78.4 5.5 0.00012 31.8 5.2 63 6-75 361-424 (438)
125 PLN02316 synthase/transferase 78.2 14 0.00031 32.9 7.9 87 7-98 934-1031(1036)
126 cd03806 GT1_ALG11_like This fa 77.9 5.5 0.00012 31.1 5.0 51 7-61 339-393 (419)
127 cd01635 Glycosyltransferase_GT 74.5 3 6.6E-05 28.0 2.5 22 6-27 195-216 (229)
128 PRK01021 lpxB lipid-A-disaccha 74.4 39 0.00084 28.4 9.1 53 8-61 499-572 (608)
129 PLN02501 digalactosyldiacylgly 73.5 13 0.00028 32.0 6.2 50 6-61 632-682 (794)
130 PLN02859 glutamine-tRNA ligase 69.8 7.2 0.00016 33.6 4.0 46 35-80 109-158 (788)
131 PRK11380 hypothetical protein; 67.1 12 0.00026 29.2 4.4 58 2-65 130-199 (353)
132 PF03352 Adenine_glyco: Methyl 66.6 13 0.00028 26.3 4.2 24 21-44 17-40 (179)
133 PF02350 Epimerase_2: UDP-N-ac 66.6 4.8 0.0001 30.9 2.2 48 8-60 268-318 (346)
134 PLN02939 transferase, transfer 65.3 24 0.00051 31.3 6.3 53 7-59 871-930 (977)
135 PLN03063 alpha,alpha-trehalose 62.2 18 0.0004 31.1 5.1 85 5-102 387-479 (797)
136 PRK10125 putative glycosyl tra 62.1 7 0.00015 30.5 2.4 21 6-26 320-340 (405)
137 TIGR00624 tag DNA-3-methyladen 62.0 39 0.00084 23.9 5.9 55 21-78 21-96 (179)
138 PRK14099 glycogen synthase; Pr 61.7 35 0.00075 27.4 6.4 51 7-57 384-441 (485)
139 COG0381 WecB UDP-N-acetylgluco 61.4 28 0.0006 27.6 5.6 77 9-101 293-371 (383)
140 cd03793 GT1_Glycogen_synthase_ 61.4 28 0.00061 29.1 5.8 19 7-25 489-507 (590)
141 cd03788 GT1_TPS Trehalose-6-Ph 60.3 26 0.00056 27.9 5.4 49 5-61 372-428 (460)
142 COG2230 Cfa Cyclopropane fatty 56.7 19 0.00041 27.3 3.8 39 4-42 81-121 (283)
143 PF11740 KfrA_N: Plasmid repli 55.0 30 0.00064 22.0 4.2 46 46-101 2-47 (120)
144 PF05225 HTH_psq: helix-turn-h 53.2 32 0.0007 18.5 3.5 26 46-73 1-26 (45)
145 COG4370 Uncharacterized protei 52.6 1E+02 0.0022 24.3 7.2 51 11-61 325-380 (412)
146 COG1400 SEC65 Signal recogniti 46.2 14 0.0003 23.5 1.4 80 18-101 3-89 (93)
147 PF13331 DUF4093: Domain of un 45.6 40 0.00087 20.9 3.5 58 41-101 2-75 (87)
148 COG1043 LpxA Acyl-[acyl carrie 42.9 82 0.0018 23.7 5.2 49 45-103 205-256 (260)
149 PF02433 FixO: Cytochrome C ox 39.3 1.2E+02 0.0025 22.4 5.5 88 13-103 128-223 (226)
150 PF06785 UPF0242: Uncharacteri 38.8 37 0.0008 26.7 3.0 28 6-33 15-42 (401)
151 COG2818 Tag 3-methyladenine DN 38.3 1.5E+02 0.0032 21.3 6.1 24 21-44 23-46 (188)
152 PF04464 Glyphos_transf: CDP-G 38.0 48 0.001 25.1 3.6 82 8-92 280-365 (369)
153 PRK14501 putative bifunctional 35.7 56 0.0012 27.6 3.9 87 5-101 373-463 (726)
154 cd07038 TPP_PYR_PDC_IPDC_like 34.4 1.1E+02 0.0023 20.7 4.5 18 6-23 75-92 (162)
155 COG0177 Nth Predicted EndoIII- 33.9 88 0.0019 22.7 4.2 46 9-60 124-169 (211)
156 smart00526 H15 Domain in histo 32.7 80 0.0017 18.0 3.2 15 83-97 21-35 (66)
157 PF05693 Glycogen_syn: Glycoge 32.2 72 0.0016 27.0 3.9 69 8-76 485-565 (633)
158 TIGR00781 ccoO cytochrome c ox 31.8 1.7E+02 0.0037 21.7 5.4 88 15-104 130-223 (232)
159 COG0118 HisH Glutamine amidotr 31.6 16 0.00034 26.5 0.0 19 1-19 117-139 (204)
160 PF03342 Rhabdo_M1: Rhabdoviru 29.8 1.1E+02 0.0024 22.1 4.0 14 22-35 145-158 (219)
161 PRK13932 stationary phase surv 29.5 85 0.0018 23.4 3.6 19 6-24 115-133 (257)
162 cd07037 TPP_PYR_MenD Pyrimidin 29.1 47 0.001 22.8 2.0 18 6-23 76-93 (162)
163 PF05159 Capsule_synth: Capsul 28.7 39 0.00085 24.5 1.7 15 9-23 211-225 (269)
164 COG2327 WcaK Polysaccharide py 28.5 3E+02 0.0066 21.9 7.7 52 6-61 294-351 (385)
165 PF06345 Drf_DAD: DRF Autoregu 27.9 48 0.001 13.8 1.2 12 6-17 3-14 (15)
166 cd07039 TPP_PYR_POX Pyrimidine 27.5 51 0.0011 22.4 2.0 18 6-23 79-96 (164)
167 PF10163 EnY2: Transcription f 27.0 97 0.0021 18.9 3.0 48 46-99 15-62 (86)
168 PF02353 CMAS: Mycolic acid cy 27.0 64 0.0014 24.0 2.6 38 4-41 71-110 (273)
169 PF09884 DUF2111: Uncharacteri 26.7 18 0.00038 22.6 -0.4 17 11-27 53-69 (84)
170 COG3245 CycB Cytochrome c5 [En 25.5 86 0.0019 20.9 2.7 25 13-37 60-84 (126)
171 PRK04885 ppnK inorganic polyph 25.4 1.4E+02 0.003 22.3 4.1 46 2-61 41-94 (265)
172 PRK00346 surE 5'(3')-nucleotid 25.1 1.2E+02 0.0026 22.5 3.7 20 6-25 106-125 (250)
173 PF01397 Terpene_synth: Terpen 24.7 2.5E+02 0.0055 19.7 5.8 38 65-102 23-60 (183)
174 KOG2635 Medium subunit of clat 24.6 1.3E+02 0.0028 24.7 3.9 24 64-87 157-180 (512)
175 cd04446 DEP_DEPDC4 DEP (Dishev 24.4 50 0.0011 21.0 1.4 15 6-20 1-15 (95)
176 PRK13931 stationary phase surv 24.2 1.3E+02 0.0027 22.5 3.7 19 6-24 111-129 (261)
177 PRK13935 stationary phase surv 24.1 1.4E+02 0.0029 22.3 3.8 23 2-24 105-128 (253)
178 PF06258 Mito_fiss_Elm1: Mitoc 23.9 2.8E+02 0.0062 21.0 5.6 22 5-26 238-259 (311)
179 COG0297 GlgA Glycogen synthase 23.7 2E+02 0.0043 23.6 4.9 84 8-97 384-474 (487)
180 cd04447 DEP_BRCC3 DEP (Disheve 23.7 53 0.0012 20.8 1.4 14 6-19 3-16 (92)
181 COG0676 Uncharacterized enzyme 23.6 31 0.00068 26.3 0.4 18 12-30 70-87 (287)
182 COG1422 Predicted membrane pro 22.8 2E+02 0.0043 20.8 4.3 70 7-83 23-94 (201)
183 PF04604 L_biotic_typeA: Type- 22.8 17 0.00036 20.6 -0.9 20 4-23 25-45 (51)
184 TIGR02302 aProt_lowcomp conser 22.5 5.5E+02 0.012 22.8 8.3 36 65-101 500-535 (851)
185 PF13779 DUF4175: Domain of un 22.4 4.8E+02 0.01 22.9 7.2 35 66-101 470-504 (820)
186 COG0438 RfaG Glycosyltransfera 22.4 2.6E+02 0.0057 19.0 8.4 49 8-61 292-343 (381)
187 TIGR00594 polc DNA-directed DN 22.2 4.2E+02 0.0092 23.8 7.0 45 52-100 698-742 (1022)
188 PRK02155 ppnK NAD(+)/NADH kina 21.7 1.9E+02 0.0041 21.8 4.3 46 2-61 69-120 (291)
189 PF15079 DUF4546: Domain of un 21.7 3.1E+02 0.0067 19.5 5.5 46 48-102 50-95 (205)
190 PF07319 DnaI_N: Primosomal pr 21.6 95 0.0021 19.2 2.3 13 65-77 16-28 (94)
191 PF04007 DUF354: Protein of un 21.5 3.9E+02 0.0084 20.6 6.7 51 5-58 256-308 (335)
192 PRK07279 dnaE DNA polymerase I 21.5 5E+02 0.011 23.6 7.2 71 20-101 605-675 (1034)
193 PF10649 DUF2478: Protein of u 21.3 78 0.0017 21.9 2.0 18 5-22 111-129 (159)
194 PHA00490 terminal protein 21.3 3.5E+02 0.0075 20.0 6.6 40 65-104 174-213 (266)
195 PRK00708 sec-independent trans 20.8 2.4E+02 0.0052 20.5 4.5 35 45-81 20-54 (209)
196 TIGR03147 cyt_nit_nrfF cytochr 20.8 2.3E+02 0.005 18.9 4.1 29 68-96 57-85 (126)
197 PLN03180 reversibly glycosylat 20.6 4.3E+02 0.0093 20.8 6.2 37 49-85 286-322 (346)
198 PF00365 PFK: Phosphofructokin 20.6 99 0.0022 23.2 2.6 24 3-26 172-195 (282)
199 PRK10144 formate-dependent nit 20.4 2.3E+02 0.0051 18.9 4.0 29 68-96 57-85 (126)
200 COG0587 DnaE DNA polymerase II 20.3 3.2E+02 0.007 25.0 5.9 73 18-101 669-741 (1139)
201 COG0496 SurE Predicted acid ph 20.3 1.4E+02 0.0031 22.3 3.2 20 6-25 107-126 (252)
202 TIGR00087 surE 5'/3'-nucleotid 20.0 1.6E+02 0.0034 21.7 3.4 20 6-25 110-129 (244)
No 1
>PLN02555 limonoid glucosyltransferase
Probab=99.97 E-value=4.4e-31 Score=208.64 Aligned_cols=102 Identities=25% Similarity=0.507 Sum_probs=97.0
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhcccccc----------CHHHHHHHHHHhhcccchHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGV----------EKDDITKALAELMVSKSANNMRNKT 70 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~----------~~~~i~~ai~~vl~~~~~~~~r~~a 70 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|+++ ++++|.++|+++|++++|+++|+||
T Consensus 360 vtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra 439 (480)
T PLN02555 360 VTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNA 439 (480)
T ss_pred EecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHH
Confidence 699999999999999999999999999999999999999999773 6899999999999888899999999
Q ss_pred HHHHHHHHHhHHcCCChHHHHHHHHHHHHhcc
Q 047426 71 KGPGKTARKAVEEGGSSFSDLNALLEDLISIC 102 (109)
Q Consensus 71 ~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~~ 102 (109)
++|++.+++++.+||||+.||++||+++...+
T Consensus 440 ~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~~ 471 (480)
T PLN02555 440 LKWKEEAEAAVAEGGSSDRNFQEFVDKLVRKS 471 (480)
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999998763
No 2
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.97 E-value=5.7e-31 Score=206.69 Aligned_cols=100 Identities=26% Similarity=0.494 Sum_probs=96.1
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc----cCHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG----VEKDDITKALAELMVSKSANNMRNKTKGPGKT 76 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~----~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~ 76 (109)
||||||||++||+++|||||+||+++||+.||+++++.||+|+. +++++|.++|+++|.+++|++||++|++|++.
T Consensus 347 vtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~ 426 (451)
T PLN02410 347 WSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQ 426 (451)
T ss_pred eecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999999999987 79999999999999887789999999999999
Q ss_pred HHHhHHcCCChHHHHHHHHHHHHh
Q 047426 77 ARKAVEEGGSSFSDLNALLEDLIS 100 (109)
Q Consensus 77 ~~~a~~~gGss~~~l~~~v~~l~~ 100 (109)
+++++.+||||+.||++||+.+..
T Consensus 427 ~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 427 LRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999875
No 3
>PLN02210 UDP-glucosyl transferase
Probab=99.97 E-value=7.9e-31 Score=206.05 Aligned_cols=99 Identities=27% Similarity=0.572 Sum_probs=94.4
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---------cCHHHHHHHHHHhhcccchHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---------VEKDDITKALAELMVSKSANNMRNKTK 71 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---------~~~~~i~~ai~~vl~~~~~~~~r~~a~ 71 (109)
||||||||++||+++|||||+||+++||+.||+++++.||+|+. +++++|.++|+++|.+++|+++|+||+
T Consensus 347 itH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~ 426 (456)
T PLN02210 347 VTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAA 426 (456)
T ss_pred EeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHH
Confidence 69999999999999999999999999999999999987899977 478899999999999888899999999
Q ss_pred HHHHHHHHhHHcCCChHHHHHHHHHHHH
Q 047426 72 GPGKTARKAVEEGGSSFSDLNALLEDLI 99 (109)
Q Consensus 72 ~l~~~~~~a~~~gGss~~~l~~~v~~l~ 99 (109)
+|++.+++++.+||||+.||++||++|+
T Consensus 427 ~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 427 ELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 9999999999999999999999999986
No 4
>PLN02207 UDP-glycosyltransferase
Probab=99.97 E-value=1.3e-30 Score=205.36 Aligned_cols=101 Identities=33% Similarity=0.620 Sum_probs=94.1
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc------------cCHHHHHHHHHHhhcccchHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG------------VEKDDITKALAELMVSKSANNMRN 68 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~------------~~~~~i~~ai~~vl~~~~~~~~r~ 68 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|++ +++++|.++|+++|++ ++++||+
T Consensus 355 vTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~ 433 (468)
T PLN02207 355 VSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRK 433 (468)
T ss_pred eecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHH
Confidence 69999999999999999999999999999999999998899972 5889999999999973 4679999
Q ss_pred HHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhcc
Q 047426 69 KTKGPGKTARKAVEEGGSSFSDLNALLEDLISIC 102 (109)
Q Consensus 69 ~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~~ 102 (109)
||++|++.+++++.+||||+.||++||+++...+
T Consensus 434 ~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~~ 467 (468)
T PLN02207 434 RVMDISQMIQRATKNGGSSFAAIEKFIHDVIGIK 467 (468)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999998753
No 5
>PLN02173 UDP-glucosyl transferase family protein
Probab=99.97 E-value=1.4e-30 Score=204.40 Aligned_cols=99 Identities=26% Similarity=0.524 Sum_probs=94.5
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---------cCHHHHHHHHHHhhcccchHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---------VEKDDITKALAELMVSKSANNMRNKTK 71 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---------~~~~~i~~ai~~vl~~~~~~~~r~~a~ 71 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|+. +++++|.++++++|.+++|+++|++|+
T Consensus 340 vtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~ 419 (449)
T PLN02173 340 MTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAG 419 (449)
T ss_pred EecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHH
Confidence 69999999999999999999999999999999999999999987 378999999999999888899999999
Q ss_pred HHHHHHHHhHHcCCChHHHHHHHHHHHH
Q 047426 72 GPGKTARKAVEEGGSSFSDLNALLEDLI 99 (109)
Q Consensus 72 ~l~~~~~~a~~~gGss~~~l~~~v~~l~ 99 (109)
+|++.+++++.+||||+.|+++||+++.
T Consensus 420 ~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 420 KWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 9999999999999999999999999885
No 6
>PLN02534 UDP-glycosyltransferase
Probab=99.96 E-value=9e-30 Score=201.64 Aligned_cols=102 Identities=43% Similarity=0.771 Sum_probs=95.3
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc------------------cCHHHHHHHHHHhhc--c
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG------------------VEKDDITKALAELMV--S 60 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~------------------~~~~~i~~ai~~vl~--~ 60 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|++ +++++|.++|+++|+ +
T Consensus 367 vtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~ 446 (491)
T PLN02534 367 LTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGG 446 (491)
T ss_pred EecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhcccc
Confidence 69999999999999999999999999999999999999999884 367899999999997 5
Q ss_pred cchHHHHHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhcc
Q 047426 61 KSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLISIC 102 (109)
Q Consensus 61 ~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~~ 102 (109)
++|+++|+||++|++.+++++.+||||+.||++||++|....
T Consensus 447 eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~~ 488 (491)
T PLN02534 447 EEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQQ 488 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence 778999999999999999999999999999999999997543
No 7
>PLN00164 glucosyltransferase; Provisional
Probab=99.96 E-value=7.5e-30 Score=201.57 Aligned_cols=101 Identities=38% Similarity=0.607 Sum_probs=94.1
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc----------cCHHHHHHHHHHhhccc--chHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG----------VEKDDITKALAELMVSK--SANNMRN 68 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~----------~~~~~i~~ai~~vl~~~--~~~~~r~ 68 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|+. +++++|.++|+++|.++ +|+.+|+
T Consensus 362 vtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~ 441 (480)
T PLN00164 362 VTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKARE 441 (480)
T ss_pred EeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHH
Confidence 69999999999999999999999999999999999888899986 36789999999999864 4889999
Q ss_pred HHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhc
Q 047426 69 KTKGPGKTARKAVEEGGSSFSDLNALLEDLISI 101 (109)
Q Consensus 69 ~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~ 101 (109)
+|++|++.+++++.+||||+.+|++||++|+..
T Consensus 442 ~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~~ 474 (480)
T PLN00164 442 KAAEMKAACRKAVEEGGSSYAALQRLAREIRHG 474 (480)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999754
No 8
>PLN03007 UDP-glucosyltransferase family protein
Probab=99.96 E-value=9.1e-30 Score=201.02 Aligned_cols=101 Identities=48% Similarity=0.787 Sum_probs=93.6
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-------------cCHHHHHHHHHHhhcccchHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-------------VEKDDITKALAELMVSKSANNMR 67 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-------------~~~~~i~~ai~~vl~~~~~~~~r 67 (109)
||||||||++||+++|||||+||+++||+.||+++++.|++|+. +++++|.++|+++|.+++|++||
T Consensus 368 vtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r 447 (482)
T PLN03007 368 VTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERR 447 (482)
T ss_pred eecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHH
Confidence 69999999999999999999999999999999999876665543 58889999999999988889999
Q ss_pred HHHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhc
Q 047426 68 NKTKGPGKTARKAVEEGGSSFSDLNALLEDLISI 101 (109)
Q Consensus 68 ~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~ 101 (109)
++|++|++.+++++.+||||+.|+++||+.+.+.
T Consensus 448 ~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 448 LRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred HHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999864
No 9
>PLN03015 UDP-glucosyl transferase
Probab=99.96 E-value=9e-30 Score=200.68 Aligned_cols=99 Identities=26% Similarity=0.615 Sum_probs=93.1
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---------cCHHHHHHHHHHhhc--ccchHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---------VEKDDITKALAELMV--SKSANNMRNK 69 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---------~~~~~i~~ai~~vl~--~~~~~~~r~~ 69 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|++ +++++|.++|+++|+ +++|+++|+|
T Consensus 358 vtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~r 437 (470)
T PLN03015 358 LSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAK 437 (470)
T ss_pred EecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHH
Confidence 69999999999999999999999999999999999999999987 478899999999996 3678999999
Q ss_pred HHHHHHHHHHhHHcCCChHHHHHHHHHHHH
Q 047426 70 TKGPGKTARKAVEEGGSSFSDLNALLEDLI 99 (109)
Q Consensus 70 a~~l~~~~~~a~~~gGss~~~l~~~v~~l~ 99 (109)
|++|++.+++++.+||||+.||++|++.+.
T Consensus 438 a~~lk~~a~~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 438 AEEVRVSSERAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHhcc
Confidence 999999999999999999999999998863
No 10
>PLN02448 UDP-glycosyltransferase family protein
Probab=99.96 E-value=2.2e-29 Score=197.83 Aligned_cols=100 Identities=35% Similarity=0.598 Sum_probs=93.6
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc----------cCHHHHHHHHHHhhcc--cchHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG----------VEKDDITKALAELMVS--KSANNMRN 68 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~----------~~~~~i~~ai~~vl~~--~~~~~~r~ 68 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|+. +++++|.++++++|.+ ++|++||+
T Consensus 346 vtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~ 425 (459)
T PLN02448 346 WTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRR 425 (459)
T ss_pred EecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHH
Confidence 69999999999999999999999999999999999988888877 3678999999999985 46889999
Q ss_pred HHHHHHHHHHHhHHcCCChHHHHHHHHHHHHh
Q 047426 69 KTKGPGKTARKAVEEGGSSFSDLNALLEDLIS 100 (109)
Q Consensus 69 ~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~ 100 (109)
+|++|++.+++++.+||||+.||++||+.++.
T Consensus 426 ~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 426 RAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999874
No 11
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=99.96 E-value=3.4e-29 Score=197.92 Aligned_cols=101 Identities=34% Similarity=0.588 Sum_probs=94.9
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-------cCHHHHHHHHHHhhcccchHHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-------VEKDDITKALAELMVSKSANNMRNKTKGP 73 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-------~~~~~i~~ai~~vl~~~~~~~~r~~a~~l 73 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|+. +++++|.++|+++|.+++|+++|++++++
T Consensus 361 itH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~ 440 (481)
T PLN02992 361 LTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKL 440 (481)
T ss_pred EecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence 69999999999999999999999999999999999878899987 58899999999999988888999999999
Q ss_pred HHHHHHhHH--cCCChHHHHHHHHHHHHhc
Q 047426 74 GKTARKAVE--EGGSSFSDLNALLEDLISI 101 (109)
Q Consensus 74 ~~~~~~a~~--~gGss~~~l~~~v~~l~~~ 101 (109)
++.+++++. +||||+.||++||+.+...
T Consensus 441 ~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~ 470 (481)
T PLN02992 441 RDTAEMSLSIDGGGVAHESLCRVTKECQRF 470 (481)
T ss_pred HHHHHHHhcCCCCCchHHHHHHHHHHHHHH
Confidence 999999994 5999999999999999765
No 12
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.96 E-value=3.9e-29 Score=197.44 Aligned_cols=100 Identities=30% Similarity=0.631 Sum_probs=93.2
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--------cCHHHHHHHHHHhhcccchHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--------VEKDDITKALAELMVSKSANNMRNKTKG 72 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--------~~~~~i~~ai~~vl~~~~~~~~r~~a~~ 72 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|++ ++++++.++++++|. ++++||+||++
T Consensus 366 vtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~--~~~~~r~~a~~ 443 (477)
T PLN02863 366 LTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVS--ENQVERERAKE 443 (477)
T ss_pred EecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhh--ccHHHHHHHHH
Confidence 69999999999999999999999999999999999989999986 478999999999995 24589999999
Q ss_pred HHHHHHHhHHcCCChHHHHHHHHHHHHhcc
Q 047426 73 PGKTARKAVEEGGSSFSDLNALLEDLISIC 102 (109)
Q Consensus 73 l~~~~~~a~~~gGss~~~l~~~v~~l~~~~ 102 (109)
|++.+++++.+||||+.||++||+.|..++
T Consensus 444 l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 444 LRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred HHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998764
No 13
>PLN02554 UDP-glycosyltransferase family protein
Probab=99.96 E-value=5e-29 Score=196.84 Aligned_cols=99 Identities=33% Similarity=0.591 Sum_probs=91.0
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc----------------cCHHHHHHHHHHhhcccchH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG----------------VEKDDITKALAELMVSKSAN 64 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~----------------~~~~~i~~ai~~vl~~~~~~ 64 (109)
||||||||++||+++|||||+||+++||+.||+++++.||+|+. +++++|.++|+++|.++ +
T Consensus 365 vtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~--~ 442 (481)
T PLN02554 365 VTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD--S 442 (481)
T ss_pred cccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCC--H
Confidence 79999999999999999999999999999999877778899864 47889999999999732 4
Q ss_pred HHHHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhc
Q 047426 65 NMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLISI 101 (109)
Q Consensus 65 ~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~ 101 (109)
+||+||+++++++++++.+||||+.+|++||++|+..
T Consensus 443 ~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~ 479 (481)
T PLN02554 443 DVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTKN 479 (481)
T ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999999999999865
No 14
>PLN02167 UDP-glycosyltransferase family protein
Probab=99.96 E-value=8.1e-29 Score=195.38 Aligned_cols=100 Identities=39% Similarity=0.639 Sum_probs=91.9
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc------------cCHHHHHHHHHHhhcccchHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG------------VEKDDITKALAELMVSKSANNMRN 68 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~------------~~~~~i~~ai~~vl~~~~~~~~r~ 68 (109)
||||||||++||+++|||||+||+++||+.|++++.+.||+|+. +++++|.++|+++|.++ +.||+
T Consensus 363 vtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~--~~~r~ 440 (475)
T PLN02167 363 VSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE--DVPRK 440 (475)
T ss_pred EeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCC--HHHHH
Confidence 69999999999999999999999999999999987788899985 36789999999999764 37999
Q ss_pred HHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhcc
Q 047426 69 KTKGPGKTARKAVEEGGSSFSDLNALLEDLISIC 102 (109)
Q Consensus 69 ~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~~ 102 (109)
+|+++++.+++++.+||||+.||++||++|+...
T Consensus 441 ~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~~~ 474 (475)
T PLN02167 441 KVKEIAEAARKAVMDGGSSFVAVKRFIDDLLGDH 474 (475)
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999997643
No 15
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=99.96 E-value=6.9e-29 Score=195.11 Aligned_cols=98 Identities=32% Similarity=0.529 Sum_probs=91.0
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--------cCHHHHHHHHHHhhcccchHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--------VEKDDITKALAELMVSKSANNMRNKTKG 72 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--------~~~~~i~~ai~~vl~~~~~~~~r~~a~~ 72 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|+. +++++|.++|+++|++ ++++||++|++
T Consensus 350 vtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~-~~~~~r~~a~~ 428 (455)
T PLN02152 350 VTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEE-KSVELRESAEK 428 (455)
T ss_pred EeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhh-hHHHHHHHHHH
Confidence 69999999999999999999999999999999999998777766 4789999999999974 46689999999
Q ss_pred HHHHHHHhHHcCCChHHHHHHHHHHHH
Q 047426 73 PGKTARKAVEEGGSSFSDLNALLEDLI 99 (109)
Q Consensus 73 l~~~~~~a~~~gGss~~~l~~~v~~l~ 99 (109)
|++.+++++.+||||+.|+++||++|+
T Consensus 429 ~~~~~~~a~~~ggsS~~nl~~li~~i~ 455 (455)
T PLN02152 429 WKRLAIEAGGEGGSSDKNVEAFVKTLC 455 (455)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHhC
Confidence 999999999999999999999999873
No 16
>PLN02562 UDP-glycosyltransferase
Probab=99.95 E-value=2.4e-28 Score=191.61 Aligned_cols=95 Identities=20% Similarity=0.385 Sum_probs=88.7
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSKSANNMRNKTKGPGKTA 77 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~ 77 (109)
||||||||++||+++|||||+||+++||+.||+++++.||+|+. +++++|.++|+++|.++ +||+||+++++.+
T Consensus 351 vtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~~v~~~l~~~---~~r~~a~~l~~~~ 427 (448)
T PLN02562 351 LTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEEGLRKVMEDS---GMGERLMKLRERA 427 (448)
T ss_pred EecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999887899988 68999999999999875 7999999999999
Q ss_pred HHhHHcCCChHHHHHHHHHHHH
Q 047426 78 RKAVEEGGSSFSDLNALLEDLI 99 (109)
Q Consensus 78 ~~a~~~gGss~~~l~~~v~~l~ 99 (109)
+++ .+||||+.||++||++++
T Consensus 428 ~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 428 MGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred Hhc-CCCCCHHHHHHHHHHHhC
Confidence 877 568999999999999873
No 17
>PLN02208 glycosyltransferase family protein
Probab=99.95 E-value=3.9e-28 Score=190.31 Aligned_cols=97 Identities=18% Similarity=0.275 Sum_probs=88.4
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--------cCHHHHHHHHHHhhccc--chHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--------VEKDDITKALAELMVSK--SANNMRNKT 70 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--------~~~~~i~~ai~~vl~~~--~~~~~r~~a 70 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|+. +++++|+++|+++|+++ +|+.+|++|
T Consensus 334 vtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~ 413 (442)
T PLN02208 334 VNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNH 413 (442)
T ss_pred EccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHH
Confidence 69999999999999999999999999999999999888899987 47899999999999754 588999999
Q ss_pred HHHHHHHHHhHHcCCChHHHHHHHHHHHHhc
Q 047426 71 KGPGKTARKAVEEGGSSFSDLNALLEDLISI 101 (109)
Q Consensus 71 ~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~ 101 (109)
+++++.+. .+|||+.++++||++++++
T Consensus 414 ~~~~~~~~----~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 414 TKLKEILV----SPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred HHHHHHHh----cCCcHHHHHHHHHHHHHHh
Confidence 99999973 4689999999999999764
No 18
>PLN02764 glycosyltransferase family protein
Probab=99.95 E-value=1.6e-27 Score=187.25 Aligned_cols=101 Identities=19% Similarity=0.320 Sum_probs=92.5
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--------cCHHHHHHHHHHhhcc--cchHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--------VEKDDITKALAELMVS--KSANNMRNKT 70 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--------~~~~~i~~ai~~vl~~--~~~~~~r~~a 70 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|+. +++++|.++++++|++ ++|+.+|+++
T Consensus 340 vtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a 419 (453)
T PLN02764 340 VSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNH 419 (453)
T ss_pred EecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHH
Confidence 69999999999999999999999999999999999888899986 5889999999999976 4588899999
Q ss_pred HHHHHHHHHhHHcCCChHHHHHHHHHHHHhccccc
Q 047426 71 KGPGKTARKAVEEGGSSFSDLNALLEDLISICSRN 105 (109)
Q Consensus 71 ~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~~~~~ 105 (109)
+++++.++ ++|||+.++++||+++.++.+.+
T Consensus 420 ~~~~~~~~----~~GSS~~~l~~lv~~~~~~~~~~ 450 (453)
T PLN02764 420 TKWRETLA----SPGLLTGYVDNFIESLQDLVSGT 450 (453)
T ss_pred HHHHHHHH----hcCCHHHHHHHHHHHHHHhcccc
Confidence 99999985 57999999999999999987654
No 19
>PLN00414 glycosyltransferase family protein
Probab=99.94 E-value=2.8e-26 Score=180.04 Aligned_cols=101 Identities=19% Similarity=0.277 Sum_probs=88.1
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--------cCHHHHHHHHHHhhcc--cchHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--------VEKDDITKALAELMVS--KSANNMRNKT 70 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--------~~~~~i~~ai~~vl~~--~~~~~~r~~a 70 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|+. +++++|+++++++|.+ ++|+++|++|
T Consensus 335 vtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a 414 (446)
T PLN00414 335 VNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNH 414 (446)
T ss_pred EecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHH
Confidence 69999999999999999999999999999999999888899977 4788999999999975 4578899999
Q ss_pred HHHHHHHHHhHHcCCChHHHHHHHHHHHHhccccc
Q 047426 71 KGPGKTARKAVEEGGSSFSDLNALLEDLISICSRN 105 (109)
Q Consensus 71 ~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~~~~~ 105 (109)
+++++.+. ++|||| ..+++||+++++.+.++
T Consensus 415 ~~~~~~~~---~~gg~s-s~l~~~v~~~~~~~~~~ 445 (446)
T PLN00414 415 KKLKETLV---SPGLLS-GYADKFVEALENEVNNT 445 (446)
T ss_pred HHHHHHHH---cCCCcH-HHHHHHHHHHHHhcccC
Confidence 99999963 456634 44999999998876653
No 20
>PLN03004 UDP-glycosyltransferase
Probab=99.94 E-value=8.4e-27 Score=183.17 Aligned_cols=86 Identities=36% Similarity=0.668 Sum_probs=80.8
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--------cCHHHHHHHHHHhhcccchHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--------VEKDDITKALAELMVSKSANNMRNKTKG 72 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--------~~~~~i~~ai~~vl~~~~~~~~r~~a~~ 72 (109)
||||||||++||+++|||||+||+++||+.|++++++.||+|++ +++++|.++|+++|+++ +||++|++
T Consensus 357 vTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~---~~r~~a~~ 433 (451)
T PLN03004 357 VTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGEC---PVRERTMA 433 (451)
T ss_pred eccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCH---HHHHHHHH
Confidence 69999999999999999999999999999999999988899977 47899999999999865 79999999
Q ss_pred HHHHHHHhHHcCCChHH
Q 047426 73 PGKTARKAVEEGGSSFS 89 (109)
Q Consensus 73 l~~~~~~a~~~gGss~~ 89 (109)
+++.++.++.+||||+.
T Consensus 434 ~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 434 MKNAAELALTETGSSHT 450 (451)
T ss_pred HHHHHHHHhcCCCCCCC
Confidence 99999999999999974
No 21
>PLN02670 transferase, transferring glycosyl groups
Probab=99.92 E-value=2.9e-25 Score=175.34 Aligned_cols=97 Identities=20% Similarity=0.353 Sum_probs=87.6
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---------cCHHHHHHHHHHhhcccchHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---------VEKDDITKALAELMVSKSANNMRNKTK 71 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---------~~~~~i~~ai~~vl~~~~~~~~r~~a~ 71 (109)
||||||||++||+++|||||+||+++||+.|+++++ .||+|+. +++++|.++|+++|.+++|++||+||+
T Consensus 362 vtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~-~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~ 440 (472)
T PLN02670 362 LTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLH-GKKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAK 440 (472)
T ss_pred eecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHH-HcCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHH
Confidence 699999999999999999999999999999999996 4699987 368999999999998888889999999
Q ss_pred HHHHHHHHhHHcCCChHHHHHHHHHHHHhcc
Q 047426 72 GPGKTARKAVEEGGSSFSDLNALLEDLISIC 102 (109)
Q Consensus 72 ~l~~~~~~a~~~gGss~~~l~~~v~~l~~~~ 102 (109)
+|++.+++. +......+.|++.+..++
T Consensus 441 ~l~~~~~~~----~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 441 EMRNLFGDM----DRNNRYVDELVHYLRENR 467 (472)
T ss_pred HHHHHHhCc----chhHHHHHHHHHHHHHhc
Confidence 999998854 677778889999888776
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=99.87 E-value=8.4e-23 Score=160.34 Aligned_cols=77 Identities=22% Similarity=0.336 Sum_probs=65.2
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-----cCHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-----VEKDDITKALAELMVSKSANNMRNKTKGPGK 75 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-----~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~ 75 (109)
||||||||++||+++|||||++|+|+||+.||+++++. |+|+. ++.+++.++|+++++++ +|++||+++++
T Consensus 346 itHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~-G~g~~l~~~~~~~~~l~~ai~~vl~~~---~y~~~a~~ls~ 421 (500)
T PF00201_consen 346 ITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEK-GVGVVLDKNDLTEEELRAAIREVLENP---SYKENAKRLSS 421 (500)
T ss_dssp EES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT-TSEEEEGGGC-SHHHHHHHHHHHHHSH---HHHHHHHHHHH
T ss_pred eeccccchhhhhhhccCCccCCCCcccCCccceEEEEE-eeEEEEEecCCcHHHHHHHHHHHHhhh---HHHHHHHHHHH
Confidence 69999999999999999999999999999999999887 99987 78999999999999987 89999999999
Q ss_pred HHHHhH
Q 047426 76 TARKAV 81 (109)
Q Consensus 76 ~~~~a~ 81 (109)
++++.+
T Consensus 422 ~~~~~p 427 (500)
T PF00201_consen 422 LFRDRP 427 (500)
T ss_dssp TTT---
T ss_pred HHhcCC
Confidence 998764
No 23
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=99.83 E-value=1.6e-20 Score=146.85 Aligned_cols=76 Identities=28% Similarity=0.460 Sum_probs=68.7
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc----cCHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG----VEKDDITKALAELMVSKSANNMRNKTKGPGKT 76 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~----~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~ 76 (109)
|||||||||+|++++|||||++|+|+||+.||+++++.+++++. ++..++..++.++++++ +|+++++++++.
T Consensus 359 vTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~~---~y~~~~~~l~~~ 435 (496)
T KOG1192|consen 359 VTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILENE---EYKEAAKRLSEI 435 (496)
T ss_pred EECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcCh---HHHHHHHHHHHH
Confidence 69999999999999999999999999999999999999777777 44445899999999887 799999999998
Q ss_pred HHH
Q 047426 77 ARK 79 (109)
Q Consensus 77 ~~~ 79 (109)
.++
T Consensus 436 ~~~ 438 (496)
T KOG1192|consen 436 LRD 438 (496)
T ss_pred HHc
Confidence 874
No 24
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=99.82 E-value=6.9e-20 Score=145.82 Aligned_cols=95 Identities=20% Similarity=0.219 Sum_probs=79.7
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-----cCHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-----VEKDDITKALAELMVSKSANNMRNKTKGPGK 75 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-----~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~ 75 (109)
|||||+||++||+++|||||++|+++||+.||+++++. |+|+. ++.+++.++|+++++++ +||++|+++++
T Consensus 369 ItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~~~~~t~~~l~~ai~~vl~~~---~y~~~a~~ls~ 444 (507)
T PHA03392 369 VTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVEL-GIGRALDTVTVSAAQLVLAIVDVIENP---KYRKNLKELRH 444 (507)
T ss_pred EecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHc-CcEEEeccCCcCHHHHHHHHHHHhCCH---HHHHHHHHHHH
Confidence 69999999999999999999999999999999999866 99987 78899999999999886 89999999999
Q ss_pred HHHHhHHcCCChHHHHHHHHHHHHhcc
Q 047426 76 TARKAVEEGGSSFSDLNALLEDLISIC 102 (109)
Q Consensus 76 ~~~~a~~~gGss~~~l~~~v~~l~~~~ 102 (109)
.+++. +-+.....-..++.+...+
T Consensus 445 ~~~~~---p~~~~~~av~~iE~v~r~~ 468 (507)
T PHA03392 445 LIRHQ---PMTPLHKAIWYTEHVIRNK 468 (507)
T ss_pred HHHhC---CCCHHHHHHHHHHHHHhCC
Confidence 99864 2233334445555554443
No 25
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.70 E-value=1e-16 Score=124.76 Aligned_cols=90 Identities=19% Similarity=0.310 Sum_probs=78.0
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-----cCHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-----VEKDDITKALAELMVSKSANNMRNKTKGPGK 75 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-----~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~ 75 (109)
|||||+||+.|++++|||+|.+|...||+.||.++++. |+|+. .+.+.++++|+++|.++ .|+++++++++
T Consensus 305 I~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~-G~G~~l~~~~l~~~~l~~av~~vL~~~---~~~~~~~~~~~ 380 (406)
T COG1819 305 IHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEEL-GAGIALPFEELTEERLRAAVNEVLADD---SYRRAAERLAE 380 (406)
T ss_pred EecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHc-CCceecCcccCCHHHHHHHHHHHhcCH---HHHHHHHHHHH
Confidence 79999999999999999999999999999999999866 99976 78899999999999987 89999999999
Q ss_pred HHHHhHHcCCChHHHHHHHHHHHH
Q 047426 76 TARKAVEEGGSSFSDLNALLEDLI 99 (109)
Q Consensus 76 ~~~~a~~~gGss~~~l~~~v~~l~ 99 (109)
.++.. +| .....+.++...
T Consensus 381 ~~~~~---~g--~~~~a~~le~~~ 399 (406)
T COG1819 381 EFKEE---DG--PAKAADLLEEFA 399 (406)
T ss_pred Hhhhc---cc--HHHHHHHHHHHH
Confidence 99865 34 344555555543
No 26
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.62 E-value=2.8e-15 Score=114.72 Aligned_cols=76 Identities=18% Similarity=0.308 Sum_probs=69.6
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-----cCHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-----VEKDDITKALAELMVSKSANNMRNKTKGPGK 75 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-----~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~ 75 (109)
|||||++|++|++++|+|+|++|...||+.|+.++.+. |+|+. ++.+++.++|++++.++ +|+++++++++
T Consensus 296 I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~-g~g~~l~~~~~~~~~l~~ai~~~l~~~---~~~~~~~~l~~ 371 (392)
T TIGR01426 296 ITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAEL-GLGRHLPPEEVTAEKLREAVLAVLSDP---RYAERLRKMRA 371 (392)
T ss_pred EECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHC-CCEEEeccccCCHHHHHHHHHHHhcCH---HHHHHHHHHHH
Confidence 69999999999999999999999999999999999765 99976 67899999999999886 79999999999
Q ss_pred HHHHh
Q 047426 76 TARKA 80 (109)
Q Consensus 76 ~~~~a 80 (109)
.++..
T Consensus 372 ~~~~~ 376 (392)
T TIGR01426 372 EIREA 376 (392)
T ss_pred HHHHc
Confidence 98753
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.60 E-value=3.9e-15 Score=113.71 Aligned_cols=73 Identities=18% Similarity=0.251 Sum_probs=63.4
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-----cCHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-----VEKDDITKALAELMVSKSANNMRNKTKGPGK 75 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-----~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~ 75 (109)
|||||+||++|++++|||+|.+|++.||+.||+++++. |+|+. ++.++|.+++++++.+ .+++++.++.+
T Consensus 309 I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~-G~g~~l~~~~~~~~~l~~al~~~l~~----~~~~~~~~~~~ 383 (401)
T cd03784 309 VHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAEL-GAGPALDPRELTAERLAAALRRLLDP----PSRRRAAALLR 383 (401)
T ss_pred eecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHC-CCCCCCCcccCCHHHHHHHHHHHhCH----HHHHHHHHHHH
Confidence 79999999999999999999999999999999999866 99987 4789999999999985 35566666666
Q ss_pred HHH
Q 047426 76 TAR 78 (109)
Q Consensus 76 ~~~ 78 (109)
.++
T Consensus 384 ~~~ 386 (401)
T cd03784 384 RIR 386 (401)
T ss_pred HHH
Confidence 654
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=98.98 E-value=1.1e-09 Score=83.78 Aligned_cols=69 Identities=19% Similarity=0.227 Sum_probs=57.9
Q ss_pred CccCChhhHHHHHHcCCCeEecCCc-----chhhhHHHHHHHHhccccc-----cCHHHHHHHHHHhhcccchHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLY-----EEQFLKKKLVTDALRIGVG-----VEKDDITKALAELMVSKSANNMRNKT 70 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~-----~DQ~~na~~~~~~~g~g~~-----~~~~~i~~ai~~vl~~~~~~~~r~~a 70 (109)
|||+|.+++.|++++|+|+|.+|+. .+|+.||..+++. |++.. ++++.+.+++.+++.+++ .|++++
T Consensus 257 Isr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~-g~~~~l~~~~~~~~~l~~~l~~ll~~~~--~~~~~~ 333 (352)
T PRK12446 257 ISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQ-GYASVLYEEDVTVNSLIKHVEELSHNNE--KYKTAL 333 (352)
T ss_pred EECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHC-CCEEEcchhcCCHHHHHHHHHHHHcCHH--HHHHHH
Confidence 6899999999999999999999985 4899999999876 99876 678899999999987652 455444
Q ss_pred HH
Q 047426 71 KG 72 (109)
Q Consensus 71 ~~ 72 (109)
++
T Consensus 334 ~~ 335 (352)
T PRK12446 334 KK 335 (352)
T ss_pred HH
Confidence 43
No 29
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=98.95 E-value=3.5e-10 Score=77.49 Aligned_cols=60 Identities=20% Similarity=0.293 Sum_probs=48.6
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcc----hhhhHHHHHHHHhccccc-----cCHHHHHHHHHHhhccc
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYE----EQFLKKKLVTDALRIGVG-----VEKDDITKALAELMVSK 61 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~----DQ~~na~~~~~~~g~g~~-----~~~~~i~~ai~~vl~~~ 61 (109)
|||+|.+|++|++++|+|+|.+|.-. +|..|+..+++. |.|+. .+.+++.++|.+++.++
T Consensus 77 Is~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~~~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 77 ISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDESELNPEELAEAIEELLSDP 145 (167)
T ss_dssp EECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSECCC-SCCCHHHHHHCHCCCH
T ss_pred EeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCcccCCHHHHHHHHHHHHcCc
Confidence 69999999999999999999999988 999999999877 88877 45678999999988765
No 30
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.91 E-value=1.9e-09 Score=80.00 Aligned_cols=56 Identities=20% Similarity=0.364 Sum_probs=49.6
Q ss_pred CccCChhhHHHHHHcCCCeEecCC--cchhhhHHHHHHHHhccccc-----cCHHHHHHHHHHh
Q 047426 1 MTNYEWSSILESVAAGVPMATWPL--YEEQFLKKKLVTDALRIGVG-----VEKDDITKALAEL 57 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~--~~DQ~~na~~~~~~~g~g~~-----~~~~~i~~ai~~v 57 (109)
|||||+++++|++++|+|+|.+|. +.+|..||+.+.+. |+|+. ++++.+.++|+++
T Consensus 255 Is~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~-G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 255 ISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEEL-GLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred EECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEcccccCCHHHHHHHHhcC
Confidence 689999999999999999999999 78999999999766 99987 5677888777653
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.83 E-value=4.2e-09 Score=79.13 Aligned_cols=57 Identities=23% Similarity=0.320 Sum_probs=47.2
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcc--hhhhHHHHHHHHhccccccCHHHHHHHHHHhhc
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYE--EQFLKKKLVTDALRIGVGVEKDDITKALAELMV 59 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~i~~ai~~vl~ 59 (109)
|||+|++|+.|++++|+|+|.+|... ||..||..+++. |+|+.++..++ +.++.++.
T Consensus 252 I~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~~~l~~~~~-~~~~~~~~ 310 (321)
T TIGR00661 252 ITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCGIALEYKEL-RLLEAILD 310 (321)
T ss_pred EECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCEEEcChhhH-HHHHHHHh
Confidence 68999999999999999999999965 899999999877 99988665555 44444443
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=98.65 E-value=1.5e-07 Score=70.89 Aligned_cols=60 Identities=23% Similarity=0.318 Sum_probs=52.7
Q ss_pred CccCChhhHHHHHHcCCCeEecCC----cchhhhHHHHHHHHhccccc-----cCHHHHHHHHHHhhccc
Q 047426 1 MTNYEWSSILESVAAGVPMATWPL----YEEQFLKKKLVTDALRIGVG-----VEKDDITKALAELMVSK 61 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~na~~~~~~~g~g~~-----~~~~~i~~ai~~vl~~~ 61 (109)
|+|+|.++++|++++|+|+|+.|. ..+|..|+..+.+. |.|+. ++.+.+.+++.++++++
T Consensus 257 i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-~~g~~~~~~~~~~~~l~~~i~~ll~~~ 325 (357)
T PRK00726 257 ICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA-GAALLIPQSDLTPEKLAEKLLELLSDP 325 (357)
T ss_pred EECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC-CCEEEEEcccCCHHHHHHHHHHHHcCH
Confidence 578899999999999999999997 46899999999877 98887 34899999999999875
No 33
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.42 E-value=7.6e-07 Score=68.76 Aligned_cols=60 Identities=18% Similarity=0.239 Sum_probs=53.8
Q ss_pred CccCChhhHHHHHHcCCCeEecCCc----chhhhHHHHHHHHhccccc-----cCHHHHHHHHHHhhccc
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLY----EEQFLKKKLVTDALRIGVG-----VEKDDITKALAELMVSK 61 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~----~DQ~~na~~~~~~~g~g~~-----~~~~~i~~ai~~vl~~~ 61 (109)
||+.|.+++-|..+.|+|+|.+|.- .+|..||..+++. |.|.. ++.+++.+.|.+++.++
T Consensus 257 IsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~-gaa~~i~~~~lt~~~l~~~i~~l~~~~ 325 (357)
T COG0707 257 ISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA-GAALVIRQSELTPEKLAELILRLLSNP 325 (357)
T ss_pred EeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC-CCEEEeccccCCHHHHHHHHHHHhcCH
Confidence 6889999999999999999999973 3799999999988 99987 68889999999999864
No 34
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.24 E-value=8.5e-06 Score=62.90 Aligned_cols=93 Identities=15% Similarity=0.051 Sum_probs=64.6
Q ss_pred ccCChhhHHHHHHcCCCeEec-CCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Q 047426 2 TNYEWSSILESVAAGVPMATW-PLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVSKSANNMRNKTKGPGKTARK 79 (109)
Q Consensus 2 tHgG~~s~~Eal~~GvP~i~~-P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 79 (109)
+..|..++.||++.|+|+|.. |.-+.+..|+..+.+. |+|+. -+.+++.++|.+++.+++ .+ .++++.+++
T Consensus 279 ~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~~~~~l~~~i~~ll~~~~---~~---~~m~~~~~~ 351 (391)
T PRK13608 279 TKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIADTPEEAIKIVASLTNGNE---QL---TNMISTMEQ 351 (391)
T ss_pred eCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeCCHHHHHHHHHHHhcCHH---HH---HHHHHHHHH
Confidence 445677899999999999998 7666677899998877 99987 588899999999998652 11 333444433
Q ss_pred hHHcCCChHHHHHHHHHHHHhcc
Q 047426 80 AVEEGGSSFSDLNALLEDLISIC 102 (109)
Q Consensus 80 a~~~gGss~~~l~~~v~~l~~~~ 102 (109)
.. .+-+...-.+.+.+.+....
T Consensus 352 ~~-~~~s~~~i~~~l~~l~~~~~ 373 (391)
T PRK13608 352 DK-IKYATQTICRDLLDLIGHSS 373 (391)
T ss_pred hc-CCCCHHHHHHHHHHHhhhhh
Confidence 32 23455555556665555443
No 35
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.14 E-value=7.1e-06 Score=61.24 Aligned_cols=60 Identities=23% Similarity=0.309 Sum_probs=50.7
Q ss_pred CccCChhhHHHHHHcCCCeEecCC----cchhhhHHHHHHHHhcccccc-----CHHHHHHHHHHhhccc
Q 047426 1 MTNYEWSSILESVAAGVPMATWPL----YEEQFLKKKLVTDALRIGVGV-----EKDDITKALAELMVSK 61 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~na~~~~~~~g~g~~~-----~~~~i~~ai~~vl~~~ 61 (109)
|+|+|.++++||+++|+|+|+.|. ..+|..|+..+.+. |.|+.+ +.+++.+++.+++.++
T Consensus 257 v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~-g~g~~v~~~~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 257 ISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKA-GAAVLIPQEELTPERLAAALLELLSDP 325 (350)
T ss_pred EECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-CCEEEEecCCCCHHHHHHHHHHHhcCH
Confidence 467888999999999999999986 45788899988876 888772 6899999999999764
No 36
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.04 E-value=2.2e-05 Score=58.56 Aligned_cols=60 Identities=25% Similarity=0.418 Sum_probs=49.2
Q ss_pred CccCChhhHHHHHHcCCCeEecCCc---chhhhHHHHHHHHhcccccc-----CHHHHHHHHHHhhccc
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLY---EEQFLKKKLVTDALRIGVGV-----EKDDITKALAELMVSK 61 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~---~DQ~~na~~~~~~~g~g~~~-----~~~~i~~ai~~vl~~~ 61 (109)
|+++|.++++|++++|+|+|+.|.- .+|..|+..+.+. +.|..+ +.+++.+++.+++.++
T Consensus 255 v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-~~G~~~~~~~~~~~~l~~~i~~ll~~~ 322 (348)
T TIGR01133 255 ISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL-GAGLVIRQKELLPEKLLEALLKLLLDP 322 (348)
T ss_pred EECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC-CCEEEEecccCCHHHHHHHHHHHHcCH
Confidence 4577888999999999999999863 4677888888765 888762 4899999999999875
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=97.99 E-value=6.3e-05 Score=57.28 Aligned_cols=59 Identities=15% Similarity=0.197 Sum_probs=48.9
Q ss_pred ccCChhhHHHHHHcCCCeEec-CCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhccc
Q 047426 2 TNYEWSSILESVAAGVPMATW-PLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVSK 61 (109)
Q Consensus 2 tHgG~~s~~Eal~~GvP~i~~-P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~~ 61 (109)
+..|..+++||+++|+|+|+. |..+.+..|+..+.+. |.++. -+.+++.+++.+++.++
T Consensus 279 ~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~~~~~~l~~~i~~ll~~~ 339 (380)
T PRK13609 279 TKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVIRDDEEVFAKTEALLQDD 339 (380)
T ss_pred eCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEECCHHHHHHHHHHHHCCH
Confidence 556778889999999999994 6666678888888655 88876 68899999999999875
No 38
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=97.98 E-value=6.9e-05 Score=57.51 Aligned_cols=58 Identities=21% Similarity=0.173 Sum_probs=49.2
Q ss_pred ccCChhhHHHHHHcCCCeEecCCcchhh-hHHHHHHHHhccccc-cCHHHHHHHHHHhhcc
Q 047426 2 TNYEWSSILESVAAGVPMATWPLYEEQF-LKKKLVTDALRIGVG-VEKDDITKALAELMVS 60 (109)
Q Consensus 2 tHgG~~s~~Eal~~GvP~i~~P~~~DQ~-~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~ 60 (109)
+..|.++++||+++|+|+|+.+....|. .|+..+.+. |.|+. -+.+++.++|.+++.+
T Consensus 288 ~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~~~~~~la~~i~~ll~~ 347 (382)
T PLN02605 288 TKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFSESPKEIARIVAEWFGD 347 (382)
T ss_pred ECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-CceeecCCHHHHHHHHHHHHcC
Confidence 4567789999999999999998766675 688888766 88877 6889999999999986
No 39
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=97.53 E-value=0.00036 Score=54.01 Aligned_cols=90 Identities=13% Similarity=0.073 Sum_probs=55.9
Q ss_pred cCChhhHHHHHHcCCCeEec----CCcc---h------hhhHHHHHHHHhccccc-----cCHHHHHHHHHHhhccc-ch
Q 047426 3 NYEWSSILESVAAGVPMATW----PLYE---E------QFLKKKLVTDALRIGVG-----VEKDDITKALAELMVSK-SA 63 (109)
Q Consensus 3 HgG~~s~~Eal~~GvP~i~~----P~~~---D------Q~~na~~~~~~~g~g~~-----~~~~~i~~ai~~vl~~~-~~ 63 (109)
-.|..++ |+.++|+|+|.. |+-. + |..|+..+... ++..+ ++++.|.+.+.+++.++ +.
T Consensus 274 ~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~-~~~pel~q~~~~~~~l~~~~~~ll~~~~~~ 351 (385)
T TIGR00215 274 ASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR-LLVPELLQEECTPHPLAIALLLLLENGLKA 351 (385)
T ss_pred cCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC-ccchhhcCCCCCHHHHHHHHHHHhcCCccc
Confidence 3466555 999999999999 7632 1 55577777655 66655 78999999999999875 11
Q ss_pred HHHHHHHHHHHHHHHHhHHcCCChHHHHHHH
Q 047426 64 NNMRNKTKGPGKTARKAVEEGGSSFSDLNAL 94 (109)
Q Consensus 64 ~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~ 94 (109)
..+++...+--..+++...++|.|....+.+
T Consensus 352 ~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i 382 (385)
T TIGR00215 352 YKEMHRERQFFEELRQRIYCNADSERAAQAV 382 (385)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 1233333333333333344556665544433
No 40
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=97.44 E-value=0.0015 Score=50.56 Aligned_cols=56 Identities=21% Similarity=0.186 Sum_probs=45.0
Q ss_pred ChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhccc
Q 047426 5 EWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVSK 61 (109)
Q Consensus 5 G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~~ 61 (109)
|..+++||+++|+|+|+-|...++......+.+. |.++. -+.+++.+++.+++.++
T Consensus 333 ~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~~d~~~La~~l~~ll~~~ 389 (425)
T PRK05749 333 GGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQVEDAEDLAKAVTYLLTDP 389 (425)
T ss_pred CCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEECCHHHHHHHHHHHhcCH
Confidence 4456999999999999999877777766666544 66665 57899999999999865
No 41
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.07 E-value=0.0047 Score=46.79 Aligned_cols=57 Identities=14% Similarity=0.076 Sum_probs=34.8
Q ss_pred cCChhhHHHHHHcCCCeEecCCcchhh-hHHHH------------HHHHhccc--cc---cCHHHHHHHHHHhhccc
Q 047426 3 NYEWSSILESVAAGVPMATWPLYEEQF-LKKKL------------VTDALRIG--VG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 3 HgG~~s~~Eal~~GvP~i~~P~~~DQ~-~na~~------------~~~~~g~g--~~---~~~~~i~~ai~~vl~~~ 61 (109)
-+|.+++ |+.++|+|+|..|-....+ ..+.. +.+. +++ +. .+++++.+.+.+++.++
T Consensus 268 ~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 268 ASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGR-ELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred CccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCC-CcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 3555554 9999999999886432211 11111 1111 111 11 57889999999999876
No 42
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=97.00 E-value=0.0051 Score=47.99 Aligned_cols=58 Identities=14% Similarity=0.129 Sum_probs=41.4
Q ss_pred ccCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHh---ccccc---cCHHHHHHHHHHhhccc
Q 047426 2 TNYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDAL---RIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 2 tHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~---g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
+-.|..+ .|+...|+|+|.+|.-..|. |+....... |.++. .+.+.+.+++.+++.++
T Consensus 302 ~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 302 AMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred ECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 4456545 99999999999999655555 887654321 33332 45689999999999875
No 43
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.77 E-value=0.0091 Score=45.11 Aligned_cols=77 Identities=17% Similarity=0.291 Sum_probs=54.1
Q ss_pred HHHHHHcCCCeEecCCcchhhhHHHHHHHHhcccccc-CHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHHcCCCh
Q 047426 9 ILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGV-EKDDITKALAELMVSKSANNMRNKTKGPGKTARKAVEEGGSS 87 (109)
Q Consensus 9 ~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~-~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss 87 (109)
+.+.+++|+|+|+++. ...+..+.+. ++|+.+ +.+++.+++..+. .++...+++|++++++.++. |---
T Consensus 253 ~~~ymA~G~PVI~~~~----~~~~~~V~~~-~~G~~v~~~~el~~~l~~~~-~~~~~~m~~n~~~~~~~~~~----g~~~ 322 (333)
T PRK09814 253 LSLYLAAGLPVIVWSK----AAIADFIVEN-GLGFVVDSLEELPEIIDNIT-EEEYQEMVENVKKISKLLRN----GYFT 322 (333)
T ss_pred HHHHHHCCCCEEECCC----ccHHHHHHhC-CceEEeCCHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhc----chhH
Confidence 6778999999999864 4456666665 888884 5578888888754 34456789999999988763 3344
Q ss_pred HHHHHHHH
Q 047426 88 FSDLNALL 95 (109)
Q Consensus 88 ~~~l~~~v 95 (109)
...+.+++
T Consensus 323 ~~~~~~~~ 330 (333)
T PRK09814 323 KKALVDAI 330 (333)
T ss_pred HHHHHHHH
Confidence 44444443
No 44
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.69 E-value=0.02 Score=41.75 Aligned_cols=51 Identities=25% Similarity=0.326 Sum_probs=38.5
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+.|..+ +...+.+. +.|.. -+.+++.+++.+++.++
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~-~~g~~~~~~~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGG----PADIVTDG-ENGLLVEPGDAEAFAAALAALLADP 333 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCC----chhhhcCC-cceEEcCCCCHHHHHHHHHHHHcCH
Confidence 478999999999999998654 33444443 56655 46677999999999875
No 45
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=96.51 E-value=0.027 Score=40.30 Aligned_cols=53 Identities=21% Similarity=0.228 Sum_probs=38.4
Q ss_pred CChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 4 YEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 4 gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
+..++++||+++|+|+|+.+. ......+.+. +.|+. .+.+++.+++.+++.++
T Consensus 287 ~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~~g~~~~~~~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 287 GFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-ETGLLVPPGDPEALAEAILRLLDDP 342 (374)
T ss_pred cccchHHHHHHcCCcEEEeCC----CChhHHhcCC-cceEEeCCCCHHHHHHHHHHHHcCh
Confidence 345789999999999999876 2334444323 45555 45789999999998875
No 46
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.40 E-value=0.016 Score=43.04 Aligned_cols=51 Identities=24% Similarity=0.257 Sum_probs=38.6
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+-+..+ +...+.+. +.|.. -+.+++.++|.+++.++
T Consensus 284 ~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~-~~g~~~~~~d~~~l~~~i~~l~~~~ 337 (367)
T cd05844 284 PVVLLEAQASGVPVVATRHGG----IPEAVEDG-ETGLLVPEGDVAALAAALGRLLADP 337 (367)
T ss_pred chHHHHHHHcCCCEEEeCCCC----chhheecC-CeeEEECCCCHHHHHHHHHHHHcCH
Confidence 578999999999999987643 44444443 55655 47789999999999865
No 47
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=96.28 E-value=0.036 Score=40.00 Aligned_cols=51 Identities=22% Similarity=0.298 Sum_probs=36.9
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+-+.. .+...+.+ .|..+. -+.+++.+++.+++.++
T Consensus 282 ~~~~~Ea~a~g~PvI~~~~~----~~~e~~~~-~g~~~~~~~~~~l~~~i~~l~~~~ 333 (365)
T cd03807 282 PNVLLEAMACGLPVVATDVG----DNAELVGD-TGFLVPPGDPEALAEAIEALLADP 333 (365)
T ss_pred CcHHHHHHhcCCCEEEcCCC----ChHHHhhc-CCEEeCCCCHHHHHHHHHHHHhCh
Confidence 47899999999999996543 33444433 244433 47889999999999875
No 48
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=96.23 E-value=0.021 Score=44.26 Aligned_cols=79 Identities=15% Similarity=0.215 Sum_probs=51.1
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc----cCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhH
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG----VEKDDITKALAELMVSKSANNMRNKTKGPGKTARKAV 81 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~----~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~ 81 (109)
.++++||+++|+|+|+-...+ ....+.+. ..|+. -+.+++.++|.+++.+++ .+ .++++..++.+
T Consensus 324 p~~llEAma~G~PVIas~vgg----~~e~i~~~-~~G~l~~~~~~~~~la~~I~~ll~~~~---~~---~~m~~~ar~~~ 392 (407)
T cd04946 324 PVSIMEAMSFGIPVIATNVGG----TPEIVDNG-GNGLLLSKDPTPNELVSSLSKFIDNEE---EY---QTMREKAREKW 392 (407)
T ss_pred cHHHHHHHHcCCCEEeCCCCC----cHHHhcCC-CcEEEeCCCCCHHHHHHHHHHHHhCHH---HH---HHHHHHHHHHH
Confidence 468999999999999976433 34444433 36655 267899999999998652 22 33444445444
Q ss_pred HcCCChHHHHHHHH
Q 047426 82 EEGGSSFSDLNALL 95 (109)
Q Consensus 82 ~~gGss~~~l~~~v 95 (109)
...=+...+.++|+
T Consensus 393 ~~~f~~~~~~~~~~ 406 (407)
T cd04946 393 EENFNASKNYREFA 406 (407)
T ss_pred HHHcCHHHhHHHhc
Confidence 45556666666654
No 49
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=96.22 E-value=0.041 Score=39.35 Aligned_cols=52 Identities=19% Similarity=0.218 Sum_probs=36.8
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+.+..+.+.. +...-..|+. -+.+++.+++.+++.++
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~ 320 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSE----IIEDGVNGLLVPNGDVEALAEALLRLMEDE 320 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHh----hhccCcceEEeCCCCHHHHHHHHHHHHcCH
Confidence 4689999999999999875443322 2223125554 46689999999999876
No 50
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=96.18 E-value=0.012 Score=45.80 Aligned_cols=58 Identities=14% Similarity=0.239 Sum_probs=48.1
Q ss_pred CccCChhhHHHHHHcCCCeEecCCcc---hhhhHHHHHHHHhccccc-----cCHHHHHHHHHHhhc
Q 047426 1 MTNYEWSSILESVAAGVPMATWPLYE---EQFLKKKLVTDALRIGVG-----VEKDDITKALAELMV 59 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~~~---DQ~~na~~~~~~~g~g~~-----~~~~~i~~ai~~vl~ 59 (109)
|+-+|.|++.|=+++|+|-+.+|... +|..=|.++++. |+.-. +++..+.+++...+.
T Consensus 299 VSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~L-GL~dvL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 299 VSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEEL-GLVDVLLPENLTPQNLADALKAALA 364 (400)
T ss_pred eecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhc-CcceeeCcccCChHHHHHHHHhccc
Confidence 57899999999999999999999865 788888888633 54333 788899999988887
No 51
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=96.17 E-value=0.0076 Score=41.82 Aligned_cols=55 Identities=16% Similarity=0.124 Sum_probs=36.9
Q ss_pred CccCChhhHHHHHHcCCCeEecCC----cchhhhHHHHHHHHhccccccCHHHHHHHHHH
Q 047426 1 MTNYEWSSILESVAAGVPMATWPL----YEEQFLKKKLVTDALRIGVGVEKDDITKALAE 56 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~----~~DQ~~na~~~~~~~g~g~~~~~~~i~~ai~~ 56 (109)
|+|+|.+|++|.+..|.|.|.++- -.-|-.-|..+++. |.=.-.++.++-+.+.+
T Consensus 85 IsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gyL~~C~ps~L~~~L~~ 143 (170)
T KOG3349|consen 85 ISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GYLYYCTPSTLPAGLAK 143 (170)
T ss_pred EecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-CcEEEeeccchHHHHHh
Confidence 689999999999999999999982 12255556666544 33222555555555543
No 52
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=96.11 E-value=0.058 Score=38.83 Aligned_cols=52 Identities=19% Similarity=0.302 Sum_probs=38.2
Q ss_pred ChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 5 EWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 5 G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
..++++||+++|+|+|+-+..+ ....+.+. ..|.. -+.+++.+++.+++.++
T Consensus 291 ~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~-~~g~~~~~~~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 291 FGLVLLEAMACGLPVVATDVGG----IPEIITDG-ENGLLVPPGDPEALAEAILRLLADP 345 (377)
T ss_pred CChHHHHHHhcCCCEEEecCCC----hHHHhcCC-cceeEECCCCHHHHHHHHHHHhcCc
Confidence 3578999999999999977543 33344333 44554 57889999999999876
No 53
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.93 E-value=0.06 Score=32.88 Aligned_cols=78 Identities=12% Similarity=0.116 Sum_probs=46.7
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhc-cccc-cCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHHc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALR-IGVG-VEKDDITKALAELMVSKSANNMRNKTKGPGKTARKAVEE 83 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g-~g~~-~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~ 83 (109)
..-++|++++|+|+|+.+- ......+. . | -++. -+.+++.+++..++.+++ ..++-+.+-++.+ ..
T Consensus 12 ~~r~~E~~a~G~~vi~~~~----~~~~~~~~-~-~~~~~~~~~~~el~~~i~~ll~~~~--~~~~ia~~a~~~v----~~ 79 (92)
T PF13524_consen 12 NMRIFEAMACGTPVISDDS----PGLREIFE-D-GEHIITYNDPEELAEKIEYLLENPE--ERRRIAKNARERV----LK 79 (92)
T ss_pred chHHHHHHHCCCeEEECCh----HHHHHHcC-C-CCeEEEECCHHHHHHHHHHHHCCHH--HHHHHHHHHHHHH----HH
Confidence 3568999999999999865 22222221 2 3 2333 389999999999999762 3343333333333 33
Q ss_pred CCChHHHHHHHH
Q 047426 84 GGSSFSDLNALL 95 (109)
Q Consensus 84 gGss~~~l~~~v 95 (109)
.=+...-++.|+
T Consensus 80 ~~t~~~~~~~il 91 (92)
T PF13524_consen 80 RHTWEHRAEQIL 91 (92)
T ss_pred hCCHHHHHHHHH
Confidence 344444444443
No 54
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=95.79 E-value=0.11 Score=37.64 Aligned_cols=51 Identities=29% Similarity=0.296 Sum_probs=37.3
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
..+++||+++|+|+|+.+.. .....+.+. +.|.. -+.+++.+++.+++.++
T Consensus 277 ~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~~d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 277 PLVIREALAAGVPVIASDIG----GMAELVRDG-VNGLLFPPGDAEDLAAALERLIDDP 330 (359)
T ss_pred ChHHHHHHHCCCCEEECCCC----CHHHHhcCC-CcEEEECCCCHHHHHHHHHHHHhCh
Confidence 35799999999999998753 344444433 35655 45789999999999865
No 55
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=95.79 E-value=0.094 Score=39.42 Aligned_cols=51 Identities=22% Similarity=0.300 Sum_probs=37.0
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+-+..+ +...+.+. ..|.. -+.+++.+++.+++.++
T Consensus 286 ~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~-~~g~~~~~~d~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 286 SNTILEAMASGLPVIATAVGG----NPELVQHG-VTGALVPPGDAVALARALQPYVSDP 339 (374)
T ss_pred chHHHHHHHcCCCEEEcCCCC----cHHHhcCC-CceEEeCCCCHHHHHHHHHHHHhCH
Confidence 578999999999999977533 33334332 34544 46889999999998865
No 56
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.77 E-value=0.052 Score=39.81 Aligned_cols=51 Identities=16% Similarity=0.187 Sum_probs=36.8
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.+++||+++|+|+|+.+..+....... +. +.|.. -+.+++.++|..++.++
T Consensus 280 ~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~~~d~~~~~~~i~~l~~~~ 333 (357)
T cd03795 280 IVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVPPGDPAALAEAIRRLLEDP 333 (357)
T ss_pred hHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeCCCCHHHHHHHHHHHHHCH
Confidence 579999999999999765544432222 12 45544 36889999999999876
No 57
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=95.77 E-value=0.027 Score=37.71 Aligned_cols=52 Identities=19% Similarity=0.250 Sum_probs=36.6
Q ss_pred ChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 5 EWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 5 G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
...+++||+++|+|+|+.. ...+...+.+. ..|.. .+.+++.++|.+++.++
T Consensus 105 ~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~-~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 105 FGLSLLEAMACGCPVIASD----IGGNNEIINDG-VNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp S-HHHHHHHHTT-EEEEES----STHHHHHSGTT-TSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred cccccccccccccceeecc----ccCCceeeccc-cceEEeCCCCHHHHHHHHHHHHCCH
Confidence 3468999999999999875 33444444333 44655 56789999999999865
No 58
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=95.75 E-value=0.088 Score=40.94 Aligned_cols=82 Identities=20% Similarity=0.150 Sum_probs=50.0
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhc-ccchHHHHHHHHHHHHHHHHhHH
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMV-SKSANNMRNKTKGPGKTARKAVE 82 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~-~~~~~~~r~~a~~l~~~~~~a~~ 82 (109)
+.++||+++|+|+|+-...+ ....+.+. ..|+. -+.+++.++|.+++. +++ . .+++.+..++.+.
T Consensus 319 ~~llEAma~G~PVI~t~~~g----~~E~v~~~-~~G~lv~~~d~~~la~ai~~l~~~d~~---~---~~~~~~~ar~~v~ 387 (406)
T PRK15427 319 VALMEAMAVGIPVVSTLHSG----IPELVEAD-KSGWLVPENDAQALAQRLAAFSQLDTD---E---LAPVVKRAREKVE 387 (406)
T ss_pred HHHHHHHhCCCCEEEeCCCC----chhhhcCC-CceEEeCCCCHHHHHHHHHHHHhCCHH---H---HHHHHHHHHHHHH
Confidence 67899999999999976533 23334332 35654 478899999999998 652 1 1223333333333
Q ss_pred cCCChHHHHHHHHHHHH
Q 047426 83 EGGSSFSDLNALLEDLI 99 (109)
Q Consensus 83 ~gGss~~~l~~~v~~l~ 99 (109)
..=+.....+++.+.+.
T Consensus 388 ~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 388 TDFNQQVINRELASLLQ 404 (406)
T ss_pred HhcCHHHHHHHHHHHHh
Confidence 34455555566655544
No 59
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=95.71 E-value=0.067 Score=39.34 Aligned_cols=51 Identities=16% Similarity=0.297 Sum_probs=36.1
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+....+ ....+.+. +.|+. .+.+++.+++.+++.++
T Consensus 278 g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~-~~g~~~~~~~~~~~~~~l~~l~~~~ 331 (365)
T cd03825 278 PNTAIEALACGTPVVAFDVGG----IPDIVDHG-VTGYLAKPGDPEDLAEGIEWLLADP 331 (365)
T ss_pred cHHHHHHHhcCCCEEEecCCC----ChhheeCC-CceEEeCCCCHHHHHHHHHHHHhCH
Confidence 478999999999999876432 22223222 34544 46889999999999865
No 60
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=95.68 E-value=0.12 Score=38.97 Aligned_cols=65 Identities=12% Similarity=0.180 Sum_probs=42.8
Q ss_pred hhhHHHHHHcCCCeEecC-CcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhcccc---hHHHHHHHHHHHH
Q 047426 6 WSSILESVAAGVPMATWP-LYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSKS---ANNMRNKTKGPGK 75 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P-~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~~---~~~~r~~a~~l~~ 75 (109)
..+++||+++|+|+|+.. ..+ ....+.+. ..|.. -+.+++.++|.+++.+++ ...++++++++..
T Consensus 271 ~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~-~~G~lv~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 342 (359)
T PRK09922 271 PMTLLEAMSYGIPCISSDCMSG----PRDIIKPG-LNGELYTPGNIDEFVGKLNKVISGEVKYQHDAIPNSIERFYE 342 (359)
T ss_pred ChHHHHHHHcCCCEEEeCCCCC----hHHHccCC-CceEEECCCCHHHHHHHHHHHHhCcccCCHHHHHHHHHHhhH
Confidence 478999999999999985 332 11233332 34544 578999999999998764 2334444444444
No 61
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=95.64 E-value=0.037 Score=41.91 Aligned_cols=49 Identities=22% Similarity=0.186 Sum_probs=36.3
Q ss_pred hHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--cCHHHHHHHHHHhhccc
Q 047426 8 SILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--VEKDDITKALAELMVSK 61 (109)
Q Consensus 8 s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--~~~~~i~~ai~~vl~~~ 61 (109)
.+.||.++|+|+|..+-..+++. +.+. |.++. -+.++|.+++.+++.++
T Consensus 285 ~~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 285 VQEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLVGTDKENITKAAKRLLTDP 335 (365)
T ss_pred HHHHHHHcCCCEEECCCCCCChH----HHhc-CceEEeCCCHHHHHHHHHHHHhCh
Confidence 47999999999999876555442 2223 55544 47899999999999765
No 62
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.61 E-value=0.09 Score=39.06 Aligned_cols=51 Identities=18% Similarity=0.173 Sum_probs=36.8
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
..+++||+++|+|+|+.+.. .....+.+. ..|.. -+.+++.+++.+++.++
T Consensus 284 ~~~~~EAma~g~PvI~s~~~----~~~e~i~~~-~~G~~~~~~~~~~l~~~i~~l~~~~ 337 (371)
T cd04962 284 GLAALEAMACGVPVVASNAG----GIPEVVKHG-ETGFLVDVGDVEAMAEYALSLLEDD 337 (371)
T ss_pred ccHHHHHHHcCCCEEEeCCC----CchhhhcCC-CceEEcCCCCHHHHHHHHHHHHhCH
Confidence 46899999999999997653 334444432 35554 36788999999998765
No 63
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=95.60 E-value=0.055 Score=39.29 Aligned_cols=51 Identities=25% Similarity=0.240 Sum_probs=37.2
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+.|..+.+... .+. +.|.. -+.+++.+++.+++.++
T Consensus 313 p~~~~Ea~~~G~pvi~~~~~~~~~~~----~~~-~~g~~~~~~~~~~l~~~i~~~~~~~ 366 (394)
T cd03794 313 PSKLFEYMAAGKPVLASVDGESAELV----EEA-GAGLVVPPGDPEALAAAILELLDDP 366 (394)
T ss_pred chHHHHHHHCCCcEEEecCCCchhhh----ccC-CcceEeCCCCHHHHHHHHHHHHhCh
Confidence 45689999999999999876544332 222 44544 37889999999999765
No 64
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=95.54 E-value=0.078 Score=38.05 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=37.0
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+-+..+ ....+.+. +.|.. -+.+++.+++.+++.++
T Consensus 277 ~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~-~~g~~~~~~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 277 PRVLLEAMAMGRPVIATDVPG----CREAVIDG-VNGFLVPPGDAEALADAIERLIEDP 330 (359)
T ss_pred chHHHHHHHcCCCEEEecCCC----chhhhhcC-cceEEECCCCHHHHHHHHHHHHhCH
Confidence 478999999999999976533 33344333 45655 35889999999988765
No 65
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=95.49 E-value=0.1 Score=38.07 Aligned_cols=50 Identities=16% Similarity=0.247 Sum_probs=36.4
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+-+..+ ...+.+. +.|.. -+.+++.+++..+++++
T Consensus 283 ~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~~~d~~~~~~~l~~l~~~~ 335 (366)
T cd03822 283 SGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVPPGDPAALAEAIRRLLADP 335 (366)
T ss_pred chHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEcCCCHHHHHHHHHHHHcCh
Confidence 367899999999999988654 2223223 45554 46889999999999864
No 66
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=95.46 E-value=0.083 Score=39.48 Aligned_cols=50 Identities=22% Similarity=0.386 Sum_probs=37.5
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.+++||+++|+|+|+-+..+ ....+.+. +.|+. -+.+++.++|.+++.++
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~-~~g~~~~~~~~~~l~~~i~~l~~~~ 369 (398)
T cd03800 317 LTALEAMACGLPVVATAVGG----PRDIVVDG-VTGLLVDPRDPEALAAALRRLLTDP 369 (398)
T ss_pred cHHHHHHhcCCCEEECCCCC----HHHHccCC-CCeEEeCCCCHHHHHHHHHHHHhCH
Confidence 68999999999999877533 33445443 56766 36889999999999764
No 67
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=95.42 E-value=0.14 Score=41.16 Aligned_cols=21 Identities=29% Similarity=0.458 Sum_probs=14.2
Q ss_pred cCChhhHHHHHHcCCCeEecC
Q 047426 3 NYEWSSILESVAAGVPMATWP 23 (109)
Q Consensus 3 HgG~~s~~Eal~~GvP~i~~P 23 (109)
..|..+++||++.|||+|++|
T Consensus 371 ~nG~TTt~dALwmGVPvVTl~ 391 (468)
T PF13844_consen 371 YNGGTTTLDALWMGVPVVTLP 391 (468)
T ss_dssp S--SHHHHHHHHHT--EEB--
T ss_pred CCCcHHHHHHHHcCCCEEecc
Confidence 568899999999999999999
No 68
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=95.35 E-value=0.11 Score=39.79 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=36.5
Q ss_pred Ch-hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--cCHHHHHHHHHHhhccc
Q 047426 5 EW-SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--VEKDDITKALAELMVSK 61 (109)
Q Consensus 5 G~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--~~~~~i~~ai~~vl~~~ 61 (109)
|+ +.++||+++|+|+|+-+...+... ... +.|+. -+.+++.++|.+++.++
T Consensus 310 G~~~~~lEAma~G~PVV~t~~~~~~i~-----~~~-~~g~lv~~~~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 310 GIQNKVLEAMAMAKPVVASPEAAEGID-----ALP-GAELLVAADPADFAAAILALLANP 363 (397)
T ss_pred CcccHHHHHHHcCCCEEecCccccccc-----ccC-CcceEeCCCHHHHHHHHHHHHcCH
Confidence 44 579999999999999986432211 112 44544 57899999999999865
No 69
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=95.27 E-value=0.2 Score=37.60 Aligned_cols=50 Identities=24% Similarity=0.300 Sum_probs=35.3
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhcccccc---CH------HHHHHHHHHhhccc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGV---EK------DDITKALAELMVSK 61 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~---~~------~~i~~ai~~vl~~~ 61 (109)
.+++||+++|+|+|+-+.. .....+.+. ..|..+ +. +.+.++|.+++.++
T Consensus 295 ~~~lEA~a~G~PvI~s~~~----~~~e~i~~~-~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~ 353 (388)
T TIGR02149 295 IVNLEAMACGTPVVASATG----GIPEVVVDG-ETGFLVPPDNSDADGFQAELAKAINILLADP 353 (388)
T ss_pred hHHHHHHHcCCCEEEeCCC----CHHHHhhCC-CceEEcCCCCCcccchHHHHHHHHHHHHhCH
Confidence 5789999999999997653 234444433 455552 33 78999999998865
No 70
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=95.25 E-value=0.06 Score=41.85 Aligned_cols=64 Identities=13% Similarity=0.324 Sum_probs=43.2
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhcc---c-chHHHHHHHHHHH
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVS---K-SANNMRNKTKGPG 74 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~---~-~~~~~r~~a~~l~ 74 (109)
.+.++||+++|+|+|+.... .....+.+. ..|+. -+.+++.++|.+++.+ + ..+.+++++++..
T Consensus 331 p~~~~Eama~G~PVI~s~~~----~~~eiv~~~-~~G~lv~d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 331 PMKVVDMFGCGLPVCALDFK----CIDELVKHG-ENGLVFGDSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred cHHHHHHHHcCCCEEEeCCC----CHHHHhcCC-CCEEEECCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 45799999999999997642 333444443 56665 4788999999999987 3 2234444444433
No 71
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=95.22 E-value=0.074 Score=39.87 Aligned_cols=64 Identities=14% Similarity=0.261 Sum_probs=41.8
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhcccc-hHHHHHHHHHH
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSKS-ANNMRNKTKGP 73 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~~-~~~~r~~a~~l 73 (109)
..+++||+++|+|+|+...-. .....+.+. ..|.. -+.+++.++|..++.+++ -+.+.+++.+.
T Consensus 292 ~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~ 359 (372)
T cd04949 292 GLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYEN 359 (372)
T ss_pred ChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeCCCcHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 468999999999999975421 123334333 45655 378899999999998752 22344444443
No 72
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=95.15 E-value=0.2 Score=38.46 Aligned_cols=82 Identities=16% Similarity=0.126 Sum_probs=50.0
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc----cCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHH
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG----VEKDDITKALAELMVSKSANNMRNKTKGPGKTARKAVE 82 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~----~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~ 82 (109)
.+++||+++|+|+|+....+ +...+.+. ..|.. .+.+++.++|.+++.+++ .+ ++.+..++.+.
T Consensus 292 ~~~lEAma~G~PVI~s~~gg----~~Eiv~~~-~~G~~l~~~~d~~~la~~I~~ll~d~~---~~----~~~~~ar~~~~ 359 (380)
T PRK15484 292 MVAVEAMAAGKPVLASTKGG----ITEFVLEG-ITGYHLAEPMTSDSIISDINRTLADPE---LT----QIAEQAKDFVF 359 (380)
T ss_pred cHHHHHHHcCCCEEEeCCCC----cHhhcccC-CceEEEeCCCCHHHHHHHHHHHHcCHH---HH----HHHHHHHHHHH
Confidence 57899999999999987532 33334333 45642 478999999999998762 22 23333333323
Q ss_pred cCCChHHHHHHHHHHHHh
Q 047426 83 EGGSSFSDLNALLEDLIS 100 (109)
Q Consensus 83 ~gGss~~~l~~~v~~l~~ 100 (109)
..=+.....+++.+.+.+
T Consensus 360 ~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 360 SKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 334444555555555443
No 73
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=95.15 E-value=0.071 Score=40.76 Aligned_cols=50 Identities=24% Similarity=0.313 Sum_probs=36.4
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
++++||+++|+|+|+.... .....+.+. ..|+. -+.+++.++|.+++.++
T Consensus 315 ~~llEAmA~G~PVIas~~~----g~~e~i~~~-~~G~lv~~~d~~~la~~i~~ll~~~ 367 (396)
T cd03818 315 WSLLEAMACGCLVVGSDTA----PVREVITDG-ENGLLVDFFDPDALAAAVIELLDDP 367 (396)
T ss_pred hHHHHHHHCCCCEEEcCCC----CchhhcccC-CceEEcCCCCHHHHHHHHHHHHhCH
Confidence 4899999999999997542 333444332 34544 46899999999999875
No 74
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=94.96 E-value=0.15 Score=36.96 Aligned_cols=50 Identities=20% Similarity=0.177 Sum_probs=36.3
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+-+..+ ....+. . +.|.. .+.+++.++|.+++.++
T Consensus 295 ~~~~~Eama~G~PvI~~~~~~----~~~~~~-~-~~~~~~~~~~~~~~~~i~~l~~~~ 346 (375)
T cd03821 295 GIVVAEALACGTPVVTTDKVP----WQELIE-Y-GCGWVVDDDVDALAAALRRALELP 346 (375)
T ss_pred CcHHHHHHhcCCCEEEcCCCC----HHHHhh-c-CceEEeCCChHHHHHHHHHHHhCH
Confidence 468999999999999976433 233333 2 45554 45589999999999875
No 75
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=94.93 E-value=0.12 Score=37.52 Aligned_cols=52 Identities=25% Similarity=0.328 Sum_probs=35.9
Q ss_pred ChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhcccccc--CHHHHHHHHHHhhccc
Q 047426 5 EWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGV--EKDDITKALAELMVSK 61 (109)
Q Consensus 5 G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~--~~~~i~~ai~~vl~~~ 61 (109)
...+++||+++|+|+|+.+..+ ....+.+. +.|..+ ..+++.+++.++++++
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~~~----~~~~i~~~-~~g~~~~~~~~~~~~~i~~l~~~~ 344 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDAPG----LPDLVADG-ENGFLFPPGDEALAEALLRLLQDP 344 (374)
T ss_pred cChHHHHHHHcCCcEEEeCCCC----hhhheecC-ceeEEeCCCCHHHHHHHHHHHhCh
Confidence 3468999999999999976532 33444332 455542 2228999999999865
No 76
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=94.86 E-value=0.19 Score=36.85 Aligned_cols=50 Identities=14% Similarity=0.161 Sum_probs=36.1
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhcc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVS 60 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~ 60 (109)
.++++||+++|+|+|+... ......+.+ .|..+. -+.+++.+++.+++.+
T Consensus 276 ~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~-~g~~~~~~~~~~~~~~i~~ll~~ 326 (360)
T cd04951 276 GLVVAEAMACELPVVATDA----GGVREVVGD-SGLIVPISDPEALANKIDEILKM 326 (360)
T ss_pred ChHHHHHHHcCCCEEEecC----CChhhEecC-CceEeCCCCHHHHHHHHHHHHhC
Confidence 4688999999999998643 334444443 355555 6788899999999853
No 77
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=94.83 E-value=0.15 Score=40.42 Aligned_cols=57 Identities=25% Similarity=0.177 Sum_probs=47.0
Q ss_pred cCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccccC-HHHHHHHHHHhhccc
Q 047426 3 NYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGVE-KDDITKALAELMVSK 61 (109)
Q Consensus 3 HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~-~~~i~~ai~~vl~~~ 61 (109)
+||.| .+|..++|+|+|.-|....|...++++... |.++.++ .+.+..++..++.++
T Consensus 330 ~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~-ga~~~v~~~~~l~~~v~~l~~~~ 387 (419)
T COG1519 330 IGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQA-GAGLQVEDADLLAKAVELLLADE 387 (419)
T ss_pred CCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhc-CCeEEECCHHHHHHHHHHhcCCH
Confidence 55655 789999999999999999999999999877 8898854 466777777777754
No 78
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=94.80 E-value=0.23 Score=38.86 Aligned_cols=50 Identities=20% Similarity=0.385 Sum_probs=36.7
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.+++||+++|+|+|+-...+ ....+.+. ..|+. -+.+++.++|.+++.++
T Consensus 355 ~~~lEAma~G~PvV~s~~gg----~~eiv~~~-~~G~lv~~~d~~~la~~i~~ll~~~ 407 (439)
T TIGR02472 355 LTLLEAAACGLPIVATDDGG----PRDIIANC-RNGLLVDVLDLEAIASALEDALSDS 407 (439)
T ss_pred cHHHHHHHhCCCEEEeCCCC----cHHHhcCC-CcEEEeCCCCHHHHHHHHHHHHhCH
Confidence 58999999999999986533 33334332 34554 47889999999999865
No 79
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=94.79 E-value=0.018 Score=39.49 Aligned_cols=24 Identities=21% Similarity=0.202 Sum_probs=22.8
Q ss_pred CccCChhhHHHHHHcCCCeEecCC
Q 047426 1 MTNYEWSSILESVAAGVPMATWPL 24 (109)
Q Consensus 1 vtHgG~~s~~Eal~~GvP~i~~P~ 24 (109)
|+|||-+|++.++..+.|.|.+|-
T Consensus 70 ISHaG~GSIL~~~rl~kplIv~pr 93 (161)
T COG5017 70 ISHAGEGSILLLLRLDKPLIVVPR 93 (161)
T ss_pred EeccCcchHHHHhhcCCcEEEEEC
Confidence 689999999999999999999994
No 80
>PRK10307 putative glycosyl transferase; Provisional
Probab=94.63 E-value=0.33 Score=37.23 Aligned_cols=84 Identities=21% Similarity=0.231 Sum_probs=50.3
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHHc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSKSANNMRNKTKGPGKTARKAVEE 83 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~ 83 (109)
+.++|++++|+|+|+.+.-+.. ....+. +.|+. -+.+++.++|.+++++++ .+ .++++..++.+..
T Consensus 322 ~kl~eama~G~PVi~s~~~g~~--~~~~i~---~~G~~~~~~d~~~la~~i~~l~~~~~---~~---~~~~~~a~~~~~~ 390 (412)
T PRK10307 322 SKLTNMLASGRNVVATAEPGTE--LGQLVE---GIGVCVEPESVEALVAAIAALARQAL---LR---PKLGTVAREYAER 390 (412)
T ss_pred HHHHHHHHcCCCEEEEeCCCch--HHHHHh---CCcEEeCCCCHHHHHHHHHHHHhCHH---HH---HHHHHHHHHHHHH
Confidence 4578999999999998753311 112222 34554 467899999999987652 11 2233333333333
Q ss_pred CCChHHHHHHHHHHHHhc
Q 047426 84 GGSSFSDLNALLEDLISI 101 (109)
Q Consensus 84 gGss~~~l~~~v~~l~~~ 101 (109)
.=+.....+++.+.+.+.
T Consensus 391 ~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 391 TLDKENVLRQFIADIRGL 408 (412)
T ss_pred HcCHHHHHHHHHHHHHHH
Confidence 455556666776666554
No 81
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=94.14 E-value=0.35 Score=39.04 Aligned_cols=63 Identities=13% Similarity=0.219 Sum_probs=38.8
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccccC-----------HHHHHHHHHHhhcccchHHHHHHHHH
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGVE-----------KDDITKALAELMVSKSANNMRNKTKG 72 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~-----------~~~i~~ai~~vl~~~~~~~~r~~a~~ 72 (109)
..+++||+++|+|+|+..... -+...+.+. .-|..+. .+.+.++|.+++.++.-..+.+++.+
T Consensus 406 gl~~lEAma~G~PVI~~dv~~---G~~eiI~~g-~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~ 479 (500)
T TIGR02918 406 GLTLMEAVGSGLGMIGFDVNY---GNPTFIEDN-KNGYLIPIDEEEDDEDQIITALAEKIVEYFNSNDIDAFHEYSYQ 479 (500)
T ss_pred cHHHHHHHHhCCCEEEecCCC---CCHHHccCC-CCEEEEeCCccccchhHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 368999999999999976421 122333332 3455433 67789999999854322334444444
No 82
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=94.13 E-value=0.077 Score=39.52 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=35.8
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.+++||+++|+|+|+....+ ....+.+. ..|+. -+.+++.++|..++.++
T Consensus 275 ~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~~~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 275 IVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFEEQTVESLAAAVERFEKNE 327 (351)
T ss_pred chHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeCCCCHHHHHHHHHHHHhCc
Confidence 46789999999999987533 22233333 45654 46788999999999875
No 83
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=94.10 E-value=0.24 Score=36.25 Aligned_cols=51 Identities=20% Similarity=0.322 Sum_probs=36.6
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+.+... ....+.+. ..|.. -+.+++.++|.+++.++
T Consensus 275 ~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~-~~g~~~~~~~~~~l~~~i~~~~~~~ 328 (355)
T cd03799 275 PVVLMEAMAMGLPVISTDVSG----IPELVEDG-ETGLLVPPGDPEALADAIERLLDDP 328 (355)
T ss_pred cHHHHHHHHcCCCEEecCCCC----cchhhhCC-CceEEeCCCCHHHHHHHHHHHHhCH
Confidence 478999999999999976532 22233222 35655 37889999999999865
No 84
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=93.95 E-value=0.18 Score=36.78 Aligned_cols=51 Identities=18% Similarity=0.313 Sum_probs=34.6
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+-...+ ....+.+. |..+. -+.+++.+++.+++.++
T Consensus 286 ~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~-~~~~~~~~~~~~~~~i~~l~~~~ 337 (365)
T cd03809 286 GLPVLEAMACGTPVIASNISS----LPEVAGDA-ALYFDPLDPEALAAAIERLLEDP 337 (365)
T ss_pred CCCHHHHhcCCCcEEecCCCC----ccceecCc-eeeeCCCCHHHHHHHHHHHhcCH
Confidence 457999999999999965422 11122222 33333 56889999999988765
No 85
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=93.73 E-value=0.32 Score=35.69 Aligned_cols=49 Identities=16% Similarity=0.232 Sum_probs=33.4
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMV 59 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~ 59 (109)
.++++||+++|+|+|+....+ ....+.+. ..|.. -+.+++.++|..++.
T Consensus 278 ~~~l~EA~a~G~PvI~~~~~~----~~e~i~~~-~~g~~~~~~~~~~l~~~i~~~~~ 329 (355)
T cd03819 278 GRTAVEAQAMGRPVIASDHGG----ARETVRPG-ETGLLVPPGDAEALAQALDQILS 329 (355)
T ss_pred chHHHHHHhcCCCEEEcCCCC----cHHHHhCC-CceEEeCCCCHHHHHHHHHHHHh
Confidence 369999999999999976432 33344333 34554 477888899865554
No 86
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=93.35 E-value=0.69 Score=34.91 Aligned_cols=51 Identities=14% Similarity=0.132 Sum_probs=34.7
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~~ 61 (109)
..+++||+++|+|+|+-+..+ ....+.+. ..|+. -+.+.+..+|.+++.++
T Consensus 287 g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~-~~g~~~~~~~~~a~~i~~ll~~~ 338 (372)
T cd03792 287 GLTVTEALWKGKPVIAGPVGG----IPLQIEDG-ETGFLVDTVEEAAVRILYLLRDP 338 (372)
T ss_pred CHHHHHHHHcCCCEEEcCCCC----chhhcccC-CceEEeCCcHHHHHHHHHHHcCH
Confidence 358999999999999976432 22233322 44554 35677888998888765
No 87
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=93.17 E-value=0.59 Score=33.30 Aligned_cols=51 Identities=20% Similarity=0.294 Sum_probs=32.1
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHH---HHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDI---TKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i---~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+-+.. .....+.+. ..|+. -+.+.+ ...+..+..++
T Consensus 277 ~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 333 (353)
T cd03811 277 PNVLLEAMALGTPVVATDCP----GPREILEDG-ENGLLVPVGDEAALAAAALALLDLLLDP 333 (353)
T ss_pred CcHHHHHHHhCCCEEEcCCC----ChHHHhcCC-CceEEECCCCHHHHHHHHHHHHhccCCh
Confidence 46899999999999997543 334445444 56665 345556 34444444443
No 88
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=93.05 E-value=1 Score=34.20 Aligned_cols=50 Identities=24% Similarity=0.256 Sum_probs=36.3
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.+++||+++|+|+|+....+ ....+.+. ..|+. -+.+++.++|.+++.++
T Consensus 317 ~~~lEAma~G~Pvi~~~~~~----~~e~i~~~-~~g~~~~~~d~~~la~~i~~~l~~~ 369 (405)
T TIGR03449 317 LVAMEAQACGTPVVAARVGG----LPVAVADG-ETGLLVDGHDPADWADALARLLDDP 369 (405)
T ss_pred hHHHHHHHcCCCEEEecCCC----cHhhhccC-CceEECCCCCHHHHHHHHHHHHhCH
Confidence 58999999999999976533 22334333 45654 37889999999999864
No 89
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.05 E-value=0.6 Score=36.98 Aligned_cols=52 Identities=25% Similarity=0.364 Sum_probs=36.3
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHH----h-ccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDA----L-RIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~----~-g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+-... .....+.+. + ..|+. -+.+++.+++.+++.++
T Consensus 384 p~~vlEAma~G~PVVatd~g----~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~ 443 (475)
T cd03813 384 PLVILEAMAAGIPVVATDVG----SCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDP 443 (475)
T ss_pred ChHHHHHHHcCCCEEECCCC----ChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCH
Confidence 47899999999999996442 233334331 0 14544 47889999999999875
No 90
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=92.83 E-value=0.42 Score=35.15 Aligned_cols=78 Identities=23% Similarity=0.226 Sum_probs=42.6
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccccCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHHcCCC
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGVEKDDITKALAELMVSKSANNMRNKTKGPGKTARKAVEEGGS 86 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGs 86 (109)
++++||+++|+|+|+...... ...+.+. |..+. ..+.+.+++.+++.+++ .+ .++++..++.+...=+
T Consensus 283 ~~~~EAma~G~PvI~s~~~~~----~e~~~~~-g~~~~-~~~~l~~~i~~l~~~~~--~~----~~~~~~~~~~~~~~fs 350 (363)
T cd04955 283 PSLLEAMAYGCPVLASDNPFN----REVLGDK-AIYFK-VGDDLASLLEELEADPE--EV----SAMAKAARERIREKYT 350 (363)
T ss_pred hHHHHHHHcCCCEEEecCCcc----ceeecCC-eeEec-CchHHHHHHHHHHhCHH--HH----HHHHHHHHHHHHHhCC
Confidence 679999999999999764321 1222111 33322 22229999999998641 22 2233333333333344
Q ss_pred hHHHHHHHHH
Q 047426 87 SFSDLNALLE 96 (109)
Q Consensus 87 s~~~l~~~v~ 96 (109)
.....+++++
T Consensus 351 ~~~~~~~~~~ 360 (363)
T cd04955 351 WEKIADQYEE 360 (363)
T ss_pred HHHHHHHHHH
Confidence 4555555554
No 91
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=92.78 E-value=0.86 Score=35.26 Aligned_cols=33 Identities=12% Similarity=0.217 Sum_probs=24.6
Q ss_pred ccCChhhHHHHHHcCCCeEecCCcc--hhhhHHHHHH
Q 047426 2 TNYEWSSILESVAAGVPMATWPLYE--EQFLKKKLVT 36 (109)
Q Consensus 2 tHgG~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~~~ 36 (109)
+-.|..|+ |+...|+|||. |.-. =|+.|++++.
T Consensus 241 ~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv 275 (347)
T PRK14089 241 ICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFV 275 (347)
T ss_pred hcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHH
Confidence 34566666 99999999998 4432 4778888876
No 92
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=92.72 E-value=0.9 Score=34.75 Aligned_cols=49 Identities=14% Similarity=0.199 Sum_probs=34.2
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhcc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVS 60 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~ 60 (109)
.+++||+++|+|+|+-+..+- ...+.+. +..+. .+.+++.+++.+++.+
T Consensus 284 ~~~~EAma~G~PVI~s~~gg~----~e~i~~~-~~~~~~~~~~~l~~~l~~~l~~ 333 (398)
T cd03796 284 IAIVEAASCGLLVVSTRVGGI----PEVLPPD-MILLAEPDVESIVRKLEEAISI 333 (398)
T ss_pred HHHHHHHHcCCCEEECCCCCc----hhheeCC-ceeecCCCHHHHHHHHHHHHhC
Confidence 489999999999999876432 2233222 22222 5778899999999875
No 93
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=92.68 E-value=0.43 Score=35.87 Aligned_cols=50 Identities=20% Similarity=0.202 Sum_probs=35.8
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--cCHHHHHHHHHHhhccc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--VEKDDITKALAELMVSK 61 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--~~~~~i~~ai~~vl~~~ 61 (109)
.+++||+++|+|+|+.-..+ ....+.+. ..|.. .+.+++.++|.+++.++
T Consensus 314 ~~~lEAma~G~PvI~s~~~~----~~e~i~~~-~~g~~~~~~~~~~a~~i~~l~~~~ 365 (392)
T cd03805 314 IVPLEAMYAGKPVIACNSGG----PLETVVDG-ETGFLCEPTPEEFAEAMLKLANDP 365 (392)
T ss_pred chHHHHHHcCCCEEEECCCC----cHHHhccC-CceEEeCCCHHHHHHHHHHHHhCh
Confidence 57899999999999975432 23334332 44544 57889999999999865
No 94
>PHA01633 putative glycosyl transferase group 1
Probab=92.58 E-value=0.47 Score=36.57 Aligned_cols=54 Identities=20% Similarity=0.129 Sum_probs=34.5
Q ss_pred hhHHHHHHcCCCeEecCC------cchh------hhHHHHHHH-Hhccccc---cCHHHHHHHHHHhhcc
Q 047426 7 SSILESVAAGVPMATWPL------YEEQ------FLKKKLVTD-ALRIGVG---VEKDDITKALAELMVS 60 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~------~~DQ------~~na~~~~~-~~g~g~~---~~~~~i~~ai~~vl~~ 60 (109)
+.++||+++|+|+|+--. .+|+ ..+..-..+ .-|.|.. .+++++.++|..++..
T Consensus 238 lvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 238 MPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL 307 (335)
T ss_pred HHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc
Confidence 578999999999998633 2222 112222221 1155554 6899999999988653
No 95
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=92.43 E-value=0.39 Score=35.28 Aligned_cols=50 Identities=16% Similarity=0.109 Sum_probs=36.3
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+-...+ ....+.+ +.+.. -+.+++.++|.+++.++
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~~~~~~~~a~~i~~l~~~~ 332 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSLDESPEIWAEEILKLKSED 332 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeCCCCHHHHHHHHHHHHhCc
Confidence 478999999999999976543 2233332 34443 34599999999999977
No 96
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=92.32 E-value=1.6 Score=34.34 Aligned_cols=51 Identities=22% Similarity=0.289 Sum_probs=36.3
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHH---Hhccccc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTD---ALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~---~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+-...+ ....+.+ . +.|.. -+.+++.++|.++++++
T Consensus 345 g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~-~~G~lv~~~d~~~la~~i~~ll~~~ 401 (465)
T PLN02871 345 GFVVLEAMASGVPVVAARAGG----IPDIIPPDQEG-KTGFLYTPGDVDDCVEKLETLLADP 401 (465)
T ss_pred CcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCC-CceEEeCCCCHHHHHHHHHHHHhCH
Confidence 357999999999999876432 2223333 2 55655 36789999999999865
No 97
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=91.79 E-value=2.5 Score=33.12 Aligned_cols=80 Identities=24% Similarity=0.268 Sum_probs=49.7
Q ss_pred hHHHHHHcCCCeEecCCcc-hhhhHHHHHHHHhccccc----------------cCHHHHHHHHHHhhcccchHHHHHHH
Q 047426 8 SILESVAAGVPMATWPLYE-EQFLKKKLVTDALRIGVG----------------VEKDDITKALAELMVSKSANNMRNKT 70 (109)
Q Consensus 8 s~~Eal~~GvP~i~~P~~~-DQ~~na~~~~~~~g~g~~----------------~~~~~i~~ai~~vl~~~~~~~~r~~a 70 (109)
.|+|+...|+|||..=-.. =.+..++++...-=+|+. .+++.+..++..++.+++ .++..
T Consensus 271 aTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~---~~~~~ 347 (373)
T PF02684_consen 271 ATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPE---KRKKQ 347 (373)
T ss_pred HHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHH---HHHHH
Confidence 5799999999999872211 123344444322113332 689999999999998763 35555
Q ss_pred HHHHHHHHHhHHcCCChHHH
Q 047426 71 KGPGKTARKAVEEGGSSFSD 90 (109)
Q Consensus 71 ~~l~~~~~~a~~~gGss~~~ 90 (109)
....+.+++....+.++...
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~ 367 (373)
T PF02684_consen 348 KELFREIRQLLGPGASSRAA 367 (373)
T ss_pred HHHHHHHHHhhhhccCCHHH
Confidence 55555555555566666554
No 98
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=91.67 E-value=1.4 Score=38.92 Aligned_cols=82 Identities=18% Similarity=0.141 Sum_probs=48.9
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhcccc-hHHHHHHHHHHHHHHHHhHH
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSKS-ANNMRNKTKGPGKTARKAVE 82 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~~-~~~~r~~a~~l~~~~~~a~~ 82 (109)
.+++||+++|+|+|+-...+ ....+... ..|+. -+.+.+.++|.+++.+++ -+.+.+++.+ .+.
T Consensus 586 LvlLEAMAcGlPVVASdvGG----~~EII~~g-~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~~gr~-------~v~ 653 (1050)
T TIGR02468 586 LTLIEAAAHGLPMVATKNGG----PVDIHRVL-DNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGLK-------NIH 653 (1050)
T ss_pred HHHHHHHHhCCCEEEeCCCC----cHHHhccC-CcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHHHHHH-------HHH
Confidence 57899999999999987543 11222221 34554 468899999999998752 1223333332 222
Q ss_pred cCCChHHHHHHHHHHHHhc
Q 047426 83 EGGSSFSDLNALLEDLISI 101 (109)
Q Consensus 83 ~gGss~~~l~~~v~~l~~~ 101 (109)
.-+.....+++++.+...
T Consensus 654 -~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 654 -LFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred -HCCHHHHHHHHHHHHHHH
Confidence 244455555666555444
No 99
>PHA01630 putative group 1 glycosyl transferase
Probab=91.14 E-value=1.1 Score=34.04 Aligned_cols=55 Identities=16% Similarity=0.200 Sum_probs=33.0
Q ss_pred hhhHHHHHHcCCCeEecCCcc--hhhh---HHHHHHH----------Hhccccc--cCHHHHHHHHHHhhcc
Q 047426 6 WSSILESVAAGVPMATWPLYE--EQFL---KKKLVTD----------ALRIGVG--VEKDDITKALAELMVS 60 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~--DQ~~---na~~~~~----------~~g~g~~--~~~~~i~~ai~~vl~~ 60 (109)
..+++||+++|+|+|+....+ |... |...+.. ..++|.. .+.+++.+.+.+++.+
T Consensus 223 gl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 223 EIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALAN 294 (331)
T ss_pred ChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHHhC
Confidence 467899999999999976433 2211 1111100 0124444 4667788888888875
No 100
>PLN02949 transferase, transferring glycosyl groups
Probab=90.98 E-value=1.2 Score=35.56 Aligned_cols=51 Identities=20% Similarity=0.240 Sum_probs=33.2
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHH--Hhccccc-cCHHHHHHHHHHhhcc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTD--ALRIGVG-VEKDDITKALAELMVS 60 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~--~~g~g~~-~~~~~i~~ai~~vl~~ 60 (109)
.+++||+++|+|+|+....+--. ..+.+ .-..|.. -+.+++.++|.+++.+
T Consensus 369 ivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~~~~~~la~ai~~ll~~ 422 (463)
T PLN02949 369 ISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLATTVEEYADAILEVLRM 422 (463)
T ss_pred hHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccCCCHHHHHHHHHHHHhC
Confidence 47999999999999987543100 00101 0013333 4788999999999974
No 101
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=90.39 E-value=0.2 Score=32.16 Aligned_cols=49 Identities=22% Similarity=0.338 Sum_probs=30.0
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--cCHHHHHHHHHHhhcc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--VEKDDITKALAELMVS 60 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--~~~~~i~~ai~~vl~~ 60 (109)
.+.++|++++|+|+|+.+.-. ....... +.|.. -+.+++.+++.+++.|
T Consensus 85 ~~k~~e~~~~G~pvi~~~~~~-----~~~~~~~-~~~~~~~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 85 PNKLLEAMAAGKPVIASDNGA-----EGIVEED-GCGVLVANDPEELAEAIERLLND 135 (135)
T ss_dssp -HHHHHHHCTT--EEEEHHHC-----HCHS----SEEEE-TT-HHHHHHHHHHHHH-
T ss_pred cHHHHHHHHhCCCEEECCcch-----hhheeec-CCeEEECCCHHHHHHHHHHHhcC
Confidence 488999999999999987611 1112112 45544 5788999999988753
No 102
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=90.09 E-value=3.4 Score=31.49 Aligned_cols=47 Identities=19% Similarity=0.268 Sum_probs=31.7
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhcccc-c-cCHHHHHHHHHHhhccc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGV-G-VEKDDITKALAELMVSK 61 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~-~-~~~~~i~~ai~~vl~~~ 61 (109)
+-++|++++|+|+|+.++ . ... +..+.++ . -+.+++.++|.+++.++
T Consensus 293 ~Kl~EylA~G~PVVat~~-~------~~~-~~~~~~~~~~~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 293 LKLFEYLAAGKPVVATPL-P------EVR-RYEDEVVLIADDPEEFVAAIEKALLED 341 (373)
T ss_pred chHHHHhccCCCEEecCc-H------HHH-hhcCcEEEeCCCHHHHHHHHHHHHhcC
Confidence 458999999999999873 1 111 2212122 2 46899999999977644
No 103
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=90.01 E-value=0.45 Score=35.55 Aligned_cols=53 Identities=19% Similarity=0.211 Sum_probs=37.2
Q ss_pred cCChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhcccccc--CHHHHHHHHHHhhccc
Q 047426 3 NYEWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGV--EKDDITKALAELMVSK 61 (109)
Q Consensus 3 HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~--~~~~i~~ai~~vl~~~ 61 (109)
..| +-+.|+.+.|+|+|..+...+ ...+.+. |+++.+ +.+++.+++.+++.++
T Consensus 284 ~Sg-gi~~Ea~~~g~PvI~~~~~~~----~~~~~~~-g~~~~~~~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 284 DSG-GIQEEASFLGVPVLNLRDRTE----RPETVES-GTNVLVGTDPEAILAAIEKLLSDE 338 (363)
T ss_pred cCc-cHHhhhhhcCCCEEeeCCCCc----cchhhhe-eeEEecCCCHHHHHHHHHHHhcCc
Confidence 344 557799999999999874322 3333344 666653 4789999999999875
No 104
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=89.23 E-value=3 Score=33.11 Aligned_cols=69 Identities=12% Similarity=0.087 Sum_probs=43.7
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc------cCHHHHHHHHHHhhcccc--hHHHHHHHHHHHHHH
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG------VEKDDITKALAELMVSKS--ANNMRNKTKGPGKTA 77 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~------~~~~~i~~ai~~vl~~~~--~~~~r~~a~~l~~~~ 77 (109)
+.++.=|+..|||.++++. |...... + +.+|..-. ++.+++.+.+.+++.+.+ .+.+++++.++++..
T Consensus 336 lHa~I~a~~~gvP~i~i~Y--~~K~~~~-~-~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~~ 411 (426)
T PRK10017 336 LHSAIISMNFGTPAIAINY--EHKSAGI-M-QQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLAEAVSRERQTG 411 (426)
T ss_pred chHHHHHHHcCCCEEEeee--hHHHHHH-H-HHcCCccEEechhhCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 3567788999999999986 4444433 2 33354422 677889999999998653 123444455554443
Q ss_pred H
Q 047426 78 R 78 (109)
Q Consensus 78 ~ 78 (109)
.
T Consensus 412 ~ 412 (426)
T PRK10017 412 M 412 (426)
T ss_pred H
Confidence 3
No 105
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=88.89 E-value=1.6 Score=37.00 Aligned_cols=21 Identities=33% Similarity=0.414 Sum_probs=18.4
Q ss_pred ChhhHHHHHHcCCCeEecCCc
Q 047426 5 EWSSILESVAAGVPMATWPLY 25 (109)
Q Consensus 5 G~~s~~Eal~~GvP~i~~P~~ 25 (109)
|.-+.++.++.|||||++|.-
T Consensus 847 GhTTg~dvLw~GvPmVTmpge 867 (966)
T KOG4626|consen 847 GHTTGMDVLWAGVPMVTMPGE 867 (966)
T ss_pred CcccchhhhccCCceeecccH
Confidence 566789999999999999963
No 106
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=88.86 E-value=5 Score=31.68 Aligned_cols=87 Identities=22% Similarity=0.280 Sum_probs=51.9
Q ss_pred hHHHHHHcCCCeEecCCcc-hhhhHHHHHHHHhccccc----------------cCHHHHHHHHHHhhcccc-hHHHHHH
Q 047426 8 SILESVAAGVPMATWPLYE-EQFLKKKLVTDALRIGVG----------------VEKDDITKALAELMVSKS-ANNMRNK 69 (109)
Q Consensus 8 s~~Eal~~GvP~i~~P~~~-DQ~~na~~~~~~~g~g~~----------------~~~~~i~~ai~~vl~~~~-~~~~r~~ 69 (109)
-++|+..+|+|||..=-.. =-+..+++....+=+++. ++++.|.+++..++.++. .+.+++.
T Consensus 275 ~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~ 354 (381)
T COG0763 275 ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEK 354 (381)
T ss_pred HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHH
Confidence 3689999999999862111 012234444433333333 679999999999998762 2344444
Q ss_pred HHHHHHHHHHhHHcCCChHHHHHHHHHHH
Q 047426 70 TKGPGKTARKAVEEGGSSFSDLNALLEDL 98 (109)
Q Consensus 70 a~~l~~~~~~a~~~gGss~~~l~~~v~~l 98 (109)
-.+++..++ .++++....+.+++.+
T Consensus 355 ~~~l~~~l~----~~~~~e~aA~~vl~~~ 379 (381)
T COG0763 355 FRELHQYLR----EDPASEIAAQAVLELL 379 (381)
T ss_pred HHHHHHHHc----CCcHHHHHHHHHHHHh
Confidence 445444443 3456666666666654
No 107
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=88.16 E-value=2.5 Score=35.11 Aligned_cols=38 Identities=21% Similarity=0.270 Sum_probs=28.4
Q ss_pred cCChhhHHHHHHcCCCeEecCCcchhhhH--HHHHHHHhccccc
Q 047426 3 NYEWSSILESVAAGVPMATWPLYEEQFLK--KKLVTDALRIGVG 44 (109)
Q Consensus 3 HgG~~s~~Eal~~GvP~i~~P~~~DQ~~n--a~~~~~~~g~g~~ 44 (109)
.+|.-|+.|+++.|||+|+++ ++||.- +..+.. -+|+.
T Consensus 518 Y~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~--~agi~ 557 (620)
T COG3914 518 YGGHTTASDALWMGVPVLTRV--GEQFASRNGASIAT--NAGIP 557 (620)
T ss_pred CCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHH--hcCCc
Confidence 478889999999999999997 888754 333332 35555
No 108
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=88.06 E-value=1.6 Score=33.44 Aligned_cols=56 Identities=20% Similarity=0.172 Sum_probs=41.9
Q ss_pred ChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc----cCHHHHHHHHHHhhccc
Q 047426 5 EWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG----VEKDDITKALAELMVSK 61 (109)
Q Consensus 5 G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~----~~~~~i~~ai~~vl~~~ 61 (109)
|..+++|+++-|+|.+++|+..-|.-.|...... |+-.. +......--+.+++.+.
T Consensus 235 aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~l-g~~~~l~~~l~~~~~~~~~~~i~~d~ 294 (318)
T COG3980 235 AGSTLYEALLLGVPSLVLPLAENQIATAKEFEAL-GIIKQLGYHLKDLAKDYEILQIQKDY 294 (318)
T ss_pred cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhc-CchhhccCCCchHHHHHHHHHhhhCH
Confidence 4578999999999999999999998888887544 65544 45555555566666654
No 109
>PLN02275 transferase, transferring glycosyl groups
Probab=87.55 E-value=1.1 Score=34.18 Aligned_cols=48 Identities=19% Similarity=0.325 Sum_probs=32.3
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhh
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELM 58 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl 58 (109)
.++++||+++|+|+|+....+ ....+.+. +.|+. -+.+++.++|.+++
T Consensus 323 p~~llEAmA~G~PVVa~~~gg----~~eiv~~g-~~G~lv~~~~~la~~i~~l~ 371 (371)
T PLN02275 323 PMKVVDMFGCGLPVCAVSYSC----IGELVKDG-KNGLLFSSSSELADQLLELL 371 (371)
T ss_pred cHHHHHHHHCCCCEEEecCCC----hHHHccCC-CCeEEECCHHHHHHHHHHhC
Confidence 467999999999999975422 44444443 56665 35667777776653
No 110
>PRK14098 glycogen synthase; Provisional
Probab=86.34 E-value=2.5 Score=33.94 Aligned_cols=50 Identities=12% Similarity=0.085 Sum_probs=31.5
Q ss_pred hhHHHHHHcCCCeEecCCcc--hhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhc
Q 047426 7 SSILESVAAGVPMATWPLYE--EQFLKKKLVTDALRIGVG---VEKDDITKALAELMV 59 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~--DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~ 59 (109)
.+.+||+++|+|.|+....+ |.... ...+. +.|+. -+.+++.++|.+++.
T Consensus 396 l~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~-~~G~l~~~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 396 MLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDK-GSGFIFHDYTPEALVAKLGEALA 450 (489)
T ss_pred HHHHHHHhCCCCeEEecCCCCceeeec--CCCCC-CceeEeCCCCHHHHHHHHHHHHH
Confidence 37899999999888876532 21110 00012 45555 578899999988763
No 111
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=86.00 E-value=3.6 Score=29.81 Aligned_cols=48 Identities=19% Similarity=0.260 Sum_probs=32.9
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMV 59 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~ 59 (109)
.+++||+++|+|+|+....+ ....+.+. ..|.. -..+++.+++..+..
T Consensus 259 ~~~lEAma~G~PvI~~~~~~----~~e~i~~~-~~g~l~~~~~~l~~~l~~l~~ 307 (335)
T cd03802 259 LVMIEAMACGTPVIAFRRGA----VPEVVEDG-VTGFLVDSVEELAAAVARADR 307 (335)
T ss_pred hHHHHHHhcCCCEEEeCCCC----chhheeCC-CcEEEeCCHHHHHHHHHHHhc
Confidence 68999999999999987532 22333222 24554 347888888888765
No 112
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=85.17 E-value=8 Score=32.19 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=27.9
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhcccccc---CHHHHHHHH
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGV---EKDDITKAL 54 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~---~~~~i~~ai 54 (109)
.++++||+++|+|+|+.... -+...+.+. ..|+.+ +.+.+.+++
T Consensus 486 p~vlLEAMA~GlPVVATdvG----G~~EiV~dG-~nG~LVp~~D~~aLa~ai 532 (578)
T PRK15490 486 PNVLIEAQMVGVPVISTPAG----GSAECFIEG-VSGFILDDAQTVNLDQAC 532 (578)
T ss_pred cHHHHHHHHhCCCEEEeCCC----CcHHHcccC-CcEEEECCCChhhHHHHH
Confidence 47899999999999988753 233444433 456542 334455544
No 113
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=84.65 E-value=1.5 Score=35.67 Aligned_cols=49 Identities=16% Similarity=0.262 Sum_probs=33.6
Q ss_pred ChhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhccc
Q 047426 5 EWSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVSK 61 (109)
Q Consensus 5 G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~~ 61 (109)
|.++.+||+++|+|+| .......+.+. .=|.. -+..++.+++..+|.+.
T Consensus 440 g~~~~ieAiS~GiPqI-------nyg~~~~V~d~-~NG~li~d~~~l~~al~~~L~~~ 489 (519)
T TIGR03713 440 DLYTQISGISAGIPQI-------NKVETDYVEHN-KNGYIIDDISELLKALDYYLDNL 489 (519)
T ss_pred ChHHHHHHHHcCCCee-------ecCCceeeEcC-CCcEEeCCHHHHHHHHHHHHhCH
Confidence 5669999999999999 22223333322 23333 46788999999999875
No 114
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=84.22 E-value=12 Score=29.97 Aligned_cols=80 Identities=15% Similarity=0.079 Sum_probs=48.9
Q ss_pred Ch-hhHHHHHHcCCC----eEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 047426 5 EW-SSILESVAAGVP----MATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSKSANNMRNKTKGPGKT 76 (109)
Q Consensus 5 G~-~s~~Eal~~GvP----~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~ 76 (109)
|+ +.++|++++|+| +|.--..+.. ..+ +-|+. .+.+.+.++|.+++..+. ++.+++..++++.
T Consensus 367 G~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~~l----~~gllVnP~d~~~lA~aI~~aL~~~~-~er~~r~~~~~~~ 437 (456)
T TIGR02400 367 GMNLVAKEYVAAQDPKDGVLILSEFAGAA----QEL----NGALLVNPYDIDGMADAIARALTMPL-EEREERHRAMMDK 437 (456)
T ss_pred ccCccHHHHHHhcCCCCceEEEeCCCCCh----HHh----CCcEEECCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHH
Confidence 44 467899999999 5555443321 112 23433 678999999999988542 2455555555555
Q ss_pred HHHhHHcCCChHHHHHHHHHHH
Q 047426 77 ARKAVEEGGSSFSDLNALLEDL 98 (109)
Q Consensus 77 ~~~a~~~gGss~~~l~~~v~~l 98 (109)
+. .-+...=.++|++.+
T Consensus 438 v~-----~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 438 LR-----KNDVQRWREDFLSDL 454 (456)
T ss_pred Hh-----hCCHHHHHHHHHHHh
Confidence 43 145555556666655
No 115
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=83.94 E-value=1.5 Score=30.52 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=20.4
Q ss_pred hHHHHHHHHhccccccCHHHHHHHHHHhhcc
Q 047426 30 LKKKLVTDALRIGVGVEKDDITKALAELMVS 60 (109)
Q Consensus 30 ~na~~~~~~~g~g~~~~~~~i~~ai~~vl~~ 60 (109)
.+-.-..+..|||+.+++++|.++|.+++..
T Consensus 102 ~d~~~Fe~~cGVGV~VT~E~I~~~V~~~i~~ 132 (164)
T PF04558_consen 102 IDVAEFEKACGVGVVVTPEQIEAAVEKYIEE 132 (164)
T ss_dssp --HHHHHHTTTTT----HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCeEECHHHHHHHHHHHHHH
Confidence 3444455667999999999999999999974
No 116
>PLN00142 sucrose synthase
Probab=83.69 E-value=13 Score=32.17 Aligned_cols=47 Identities=15% Similarity=0.303 Sum_probs=32.4
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhh
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELM 58 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl 58 (109)
.+++||.++|+|+|+-...+ ....+.+. ..|.. -+.+++.++|.+++
T Consensus 681 LvvLEAMA~GlPVVATdvGG----~~EIV~dG-~tG~LV~P~D~eaLA~aI~~lL 730 (815)
T PLN00142 681 LTVVEAMTCGLPTFATCQGG----PAEIIVDG-VSGFHIDPYHGDEAANKIADFF 730 (815)
T ss_pred HHHHHHHHcCCCEEEcCCCC----HHHHhcCC-CcEEEeCCCCHHHHHHHHHHHH
Confidence 58999999999999976543 33344332 35655 35778888887654
No 117
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=83.47 E-value=9.9 Score=32.77 Aligned_cols=47 Identities=13% Similarity=0.320 Sum_probs=34.0
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhh
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELM 58 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl 58 (109)
.+++||+++|+|+|+-...+ ....+.+. ..|+. -+.+++.++|.+++
T Consensus 658 LvvLEAMAcGlPVVAT~~GG----~~EiV~dg-~tGfLVdp~D~eaLA~aL~~ll 707 (784)
T TIGR02470 658 LTVLEAMTCGLPTFATRFGG----PLEIIQDG-VSGFHIDPYHGEEAAEKIVDFF 707 (784)
T ss_pred HHHHHHHHcCCCEEEcCCCC----HHHHhcCC-CcEEEeCCCCHHHHHHHHHHHH
Confidence 57899999999999976543 33444333 45655 46788999998876
No 118
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=83.05 E-value=3.4 Score=32.25 Aligned_cols=49 Identities=14% Similarity=0.035 Sum_probs=32.7
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHH-----hccccc---cCHHHHHHHHHHhhc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDA-----LRIGVG---VEKDDITKALAELMV 59 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~-----~g~g~~---~~~~~i~~ai~~vl~ 59 (109)
.+.+||+++|+|+|+....+- ...+.+. -+.|+. -+.+++.+++.+++.
T Consensus 385 l~~lEAma~G~pvI~~~~gg~----~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~ 441 (476)
T cd03791 385 LTQMYAMRYGTVPIVRATGGL----ADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALA 441 (476)
T ss_pred HHHHHHhhCCCCCEECcCCCc----cceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHH
Confidence 478999999999998765331 1122111 035655 467899999999876
No 119
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=82.70 E-value=6.2 Score=31.07 Aligned_cols=49 Identities=14% Similarity=0.036 Sum_probs=32.5
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHHHH-----hccccc---cCHHHHHHHHHHhhc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVTDA-----LRIGVG---VEKDDITKALAELMV 59 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~-----~g~g~~---~~~~~i~~ai~~vl~ 59 (109)
.+.+||+++|+|+|+-...+ ....+.+. -+.|+. -+.+++.++|.+++.
T Consensus 380 l~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 380 LTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALR 436 (473)
T ss_pred HHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHH
Confidence 47899999999999876532 11112110 034554 578899999998876
No 120
>PLN02846 digalactosyldiacylglycerol synthase
Probab=82.19 E-value=6.9 Score=31.53 Aligned_cols=50 Identities=8% Similarity=0.028 Sum_probs=34.3
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+...-. + ..+.+. +-|.. -+.+++.+++.+++.++
T Consensus 314 g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~-~ng~~~~~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 314 CTTTAEALAMGKIVVCANHPS----N-EFFKQF-PNCRTYDDGKGFVRATLKALAEE 364 (462)
T ss_pred hHHHHHHHHcCCcEEEecCCC----c-ceeecC-CceEecCCHHHHHHHHHHHHccC
Confidence 368899999999999986433 2 222222 33433 46788999999888754
No 121
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=81.11 E-value=8.6 Score=32.58 Aligned_cols=49 Identities=22% Similarity=0.276 Sum_probs=32.4
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhcccccc-----CHHHHHHHHHHhhc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGV-----EKDDITKALAELMV 59 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~-----~~~~i~~ai~~vl~ 59 (109)
.++++||+++|+|+|+....+ ....+.+. ..|+.+ +.+++.+++.+++.
T Consensus 605 p~vlLEAMA~G~PVVat~~gG----~~EiV~dg-~~GlLv~~~d~~~~~La~aL~~ll~ 658 (694)
T PRK15179 605 PNVLIEAQFSGVPVVTTLAGG----AGEAVQEG-VTGLTLPADTVTAPDVAEALARIHD 658 (694)
T ss_pred hHHHHHHHHcCCeEEEECCCC----hHHHccCC-CCEEEeCCCCCChHHHHHHHHHHHh
Confidence 478999999999999987532 33334332 345542 34577778777665
No 122
>PRK00654 glgA glycogen synthase; Provisional
Probab=80.05 E-value=5 Score=31.69 Aligned_cols=52 Identities=12% Similarity=0.082 Sum_probs=32.3
Q ss_pred hhHHHHHHcCCCeEecCCcc--hhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhc
Q 047426 7 SSILESVAAGVPMATWPLYE--EQFLKKKLVTDALRIGVG---VEKDDITKALAELMV 59 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~--DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~ 59 (109)
.+.+||+++|+|.|+....+ |...+...-.+. +.|+. -+.+++.+++.+++.
T Consensus 371 l~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 371 LTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFDDFNAEDLLRALRRALE 427 (466)
T ss_pred HHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeCCCCHHHHHHHHHHHHH
Confidence 47899999999999875432 211110000011 44554 477889999998876
No 123
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=78.53 E-value=17 Score=25.87 Aligned_cols=72 Identities=8% Similarity=0.099 Sum_probs=44.9
Q ss_pred ecCCcchhhhHHHHHHHHhccccc-----------------cCHHHHH----HHHHHhhcccchHHHHHHHHHHHHHHHH
Q 047426 21 TWPLYEEQFLKKKLVTDALRIGVG-----------------VEKDDIT----KALAELMVSKSANNMRNKTKGPGKTARK 79 (109)
Q Consensus 21 ~~P~~~DQ~~na~~~~~~~g~g~~-----------------~~~~~i~----~ai~~vl~~~~~~~~r~~a~~l~~~~~~ 79 (109)
+.|...||.+.-.++-+...+|+. ++.+.|. +-|.++|.++ .+-+|-+|+++.+..
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d~---~IIRnr~KI~Avi~N 98 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDA---GIIRHRGKIQAIIGN 98 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc---hhHHhHHHHHHHHHH
Confidence 567789999998887777788887 3455553 5667777776 344455555554443
Q ss_pred h------HHcCCChHHHHHHHH
Q 047426 80 A------VEEGGSSFSDLNALL 95 (109)
Q Consensus 80 a------~~~gGss~~~l~~~v 95 (109)
| ..++||-..-+=.||
T Consensus 99 A~~~l~i~~e~gSf~~ylW~fv 120 (187)
T PRK10353 99 ARAYLQMEQNGEPFADFVWSFV 120 (187)
T ss_pred HHHHHHHHHhcCCHHHHHhhcc
Confidence 2 234566555554443
No 124
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=78.40 E-value=5.5 Score=31.79 Aligned_cols=63 Identities=8% Similarity=0.119 Sum_probs=38.7
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVSKSANNMRNKTKGPGK 75 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~ 75 (109)
..+++||+.+|+|+++.=.- ..+...+.+ |-=+. -+.+++.++|.+++.+++ .+++....-++
T Consensus 361 ~~al~eA~~~G~pI~afd~t---~~~~~~i~~--g~l~~~~~~~~m~~~i~~lL~d~~--~~~~~~~~q~~ 424 (438)
T TIGR02919 361 LNAVRRAFEYNLLILGFEET---AHNRDFIAS--ENIFEHNEVDQLISKLKDLLNDPN--QFRELLEQQRE 424 (438)
T ss_pred HHHHHHHHHcCCcEEEEecc---cCCcccccC--CceecCCCHHHHHHHHHHHhcCHH--HHHHHHHHHHH
Confidence 58999999999999997432 122222221 11111 467888999999998762 45544444333
No 125
>PLN02316 synthase/transferase
Probab=78.24 E-value=14 Score=32.86 Aligned_cols=87 Identities=9% Similarity=-0.002 Sum_probs=50.6
Q ss_pred hhHHHHHHcCCCeEecCCcc--hhhhHHH----HHHHH--hccccc---cCHHHHHHHHHHhhcccchHHHHHHHHHHHH
Q 047426 7 SSILESVAAGVPMATWPLYE--EQFLKKK----LVTDA--LRIGVG---VEKDDITKALAELMVSKSANNMRNKTKGPGK 75 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~--DQ~~na~----~~~~~--~g~g~~---~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~ 75 (109)
.+.+||+++|+|.|+-...+ |...... ..... -+.|+. .+++.+..+|.+++.. |......++.
T Consensus 934 LvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~-----~~~~~~~~~~ 1008 (1036)
T PLN02316 934 LTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISA-----WYDGRDWFNS 1008 (1036)
T ss_pred HHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhh-----hhhhHHHHHH
Confidence 57899999999888765433 2211110 00000 034554 4788999999999864 3334444566
Q ss_pred HHHHhHHcCCChHHHHHHHHHHH
Q 047426 76 TARKAVEEGGSSFSDLNALLEDL 98 (109)
Q Consensus 76 ~~~~a~~~gGss~~~l~~~v~~l 98 (109)
..+..+...-|.....+++.+.-
T Consensus 1009 ~~r~~m~~dFSW~~~A~~Y~~LY 1031 (1036)
T PLN02316 1009 LCKRVMEQDWSWNRPALDYMELY 1031 (1036)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHH
Confidence 66666555556666555555443
No 126
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=77.85 E-value=5.5 Score=31.07 Aligned_cols=51 Identities=14% Similarity=0.165 Sum_probs=34.7
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhHHHHHH---HHhccccc-cCHHHHHHHHHHhhccc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLKKKLVT---DALRIGVG-VEKDDITKALAELMVSK 61 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~---~~~g~g~~-~~~~~i~~ai~~vl~~~ 61 (109)
.+++||+++|+|+|+....+.- ...+. +. ..|+. -+.+++.++|.+++.++
T Consensus 339 i~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~g-~~G~l~~d~~~la~ai~~ll~~~ 393 (419)
T cd03806 339 IGVVEYMAAGLIPLAHASGGPL---LDIVVPWDGG-PTGFLASTAEEYAEAIEKILSLS 393 (419)
T ss_pred cHHHHHHHcCCcEEEEcCCCCc---hheeeccCCC-CceEEeCCHHHHHHHHHHHHhCC
Confidence 5789999999999987543211 11111 12 35554 48899999999999854
No 127
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=74.54 E-value=3 Score=27.97 Aligned_cols=22 Identities=23% Similarity=0.288 Sum_probs=18.7
Q ss_pred hhhHHHHHHcCCCeEecCCcch
Q 047426 6 WSSILESVAAGVPMATWPLYEE 27 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~D 27 (109)
.++++||+++|+|+|+-+.-+.
T Consensus 195 ~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 195 GLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred ChHHHHHHhCCCCEEEcCCCCc
Confidence 4789999999999999886543
No 128
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=74.42 E-value=39 Score=28.43 Aligned_cols=53 Identities=11% Similarity=0.165 Sum_probs=31.3
Q ss_pred hHHHHHHcCCCeEecCCcc-hhhhHHHHHHHH--hccccc------------------cCHHHHHHHHHHhhccc
Q 047426 8 SILESVAAGVPMATWPLYE-EQFLKKKLVTDA--LRIGVG------------------VEKDDITKALAELMVSK 61 (109)
Q Consensus 8 s~~Eal~~GvP~i~~P~~~-DQ~~na~~~~~~--~g~g~~------------------~~~~~i~~ai~~vl~~~ 61 (109)
-++|+...|+|||..=-.. =.+..++++... -=+++. .++++|.+++ +++.++
T Consensus 499 aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~ 572 (608)
T PRK01021 499 IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTS 572 (608)
T ss_pred HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCH
Confidence 4799999999999863211 122334444430 012222 4688999887 777655
No 129
>PLN02501 digalactosyldiacylglycerol synthase
Probab=73.46 E-value=13 Score=32.05 Aligned_cols=50 Identities=12% Similarity=0.126 Sum_probs=35.0
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~~ 61 (109)
.++++||+++|+|+|+-..-+... +.+. +.|.. -+.+++.++|.+++.++
T Consensus 632 GlVlLEAMA~GlPVVATd~pG~e~-----V~~g-~nGll~~D~EafAeAI~~LLsd~ 682 (794)
T PLN02501 632 CTATAEALAMGKFVVCADHPSNEF-----FRSF-PNCLTYKTSEDFVAKVKEALANE 682 (794)
T ss_pred hHHHHHHHHcCCCEEEecCCCCce-----Eeec-CCeEecCCHHHHHHHHHHHHhCc
Confidence 368999999999999987654321 2111 22322 46789999999999865
No 130
>PLN02859 glutamine-tRNA ligase
Probab=69.82 E-value=7.2 Score=33.60 Aligned_cols=46 Identities=24% Similarity=0.304 Sum_probs=32.3
Q ss_pred HHHHhccccccCHHHHHHHHHHhhcccc----hHHHHHHHHHHHHHHHHh
Q 047426 35 VTDALRIGVGVEKDDITKALAELMVSKS----ANNMRNKTKGPGKTARKA 80 (109)
Q Consensus 35 ~~~~~g~g~~~~~~~i~~ai~~vl~~~~----~~~~r~~a~~l~~~~~~a 80 (109)
..+..|||+.+++++|.++|.++++..+ .+.|+.|.-.+-..+++.
T Consensus 109 Fek~CGVGV~VT~EqI~~~V~~~i~~~k~~il~~RY~~n~g~ll~~~r~~ 158 (788)
T PLN02859 109 FEEACGVGVVVSPEDIEAAVNEVFEENKEKILEQRYRTNVGDLLGQVRKR 158 (788)
T ss_pred HHHhCCCCEEECHHHHHHHHHHHHHhhHHHHHHhcccccHHHHHHHHHhh
Confidence 4455699999999999999999987432 124666555555555543
No 131
>PRK11380 hypothetical protein; Provisional
Probab=67.10 E-value=12 Score=29.23 Aligned_cols=58 Identities=16% Similarity=0.228 Sum_probs=41.0
Q ss_pred ccCChhhHHHH------------HHcCCCeEecCCcchhhhHHHHHHHHhccccccCHHHHHHHHHHhhcccchHH
Q 047426 2 TNYEWSSILES------------VAAGVPMATWPLYEEQFLKKKLVTDALRIGVGVEKDDITKALAELMVSKSANN 65 (109)
Q Consensus 2 tHgG~~s~~Ea------------l~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~i~~ai~~vl~~~~~~~ 65 (109)
-||+|..++|. =+++.|+++.++ -+... ..+.+.|||- ++++..+.|..+..+..+..
T Consensus 130 ~~g~~~etLet~p~~~~~g~~~~~~~~lp~~~~~i-~~er~--~~L~~~WGI~---drEsai~tL~~L~~~GH~A~ 199 (353)
T PRK11380 130 YHGQWSETLEFWPRKPRPGKDTFQYHVLPFDSIDI-ISKRR--ESLEDDWGIE---DSEGYCALMEHLLSGDHGAN 199 (353)
T ss_pred Hhhhhhhhhhccccccccccccccccccccccccc-hhhhH--HHHHhccCCC---CHHHHHHHHHHHHhCCchhh
Confidence 37888888888 677889999887 33333 3455566653 88889999988887665333
No 132
>PF03352 Adenine_glyco: Methyladenine glycosylase; InterPro: IPR005019 This family of methyladenine glycosylases includes DNA-3-methyladenine glycosylase I (3.2.2.20 from EC) which acts as a base excision repair enzyme by severing the glycosylic bond of numerous damaged bases. The enzyme is constitutively expressed and is specific for the alkylated 3-methyladenine DNA.; GO: 0008725 DNA-3-methyladenine glycosylase I activity, 0006284 base-excision repair; PDB: 2OFI_A 2OFK_A 2JG6_A 4AIA_E 4AI5_C 4AI4_A 1LMZ_A 1P7M_A 1NKU_A.
Probab=66.63 E-value=13 Score=26.33 Aligned_cols=24 Identities=17% Similarity=0.362 Sum_probs=15.7
Q ss_pred ecCCcchhhhHHHHHHHHhccccc
Q 047426 21 TWPLYEEQFLKKKLVTDALRIGVG 44 (109)
Q Consensus 21 ~~P~~~DQ~~na~~~~~~~g~g~~ 44 (109)
+.|...|+.+...+.-+.+.+|+.
T Consensus 17 G~P~~dD~~LFe~L~Le~fQaGLs 40 (179)
T PF03352_consen 17 GRPVHDDRKLFEMLTLEGFQAGLS 40 (179)
T ss_dssp TSS---HHHHHHHHHHHHHTTTS-
T ss_pred CCcccCHHHHHHHHHHHHHHhhCC
Confidence 357788998888877777788887
No 133
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=66.59 E-value=4.8 Score=30.93 Aligned_cols=48 Identities=19% Similarity=0.224 Sum_probs=29.2
Q ss_pred hHH-HHHHcCCCeEecCCcchhhhHHHHHHHHhcccc--ccCHHHHHHHHHHhhcc
Q 047426 8 SIL-ESVAAGVPMATWPLYEEQFLKKKLVTDALRIGV--GVEKDDITKALAELMVS 60 (109)
Q Consensus 8 s~~-Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~--~~~~~~i~~ai~~vl~~ 60 (109)
++. ||.++|+|.|.+=...+.+ ..+. . |..+ ..+.++|.+++.+++.+
T Consensus 268 GI~eEa~~lg~P~v~iR~~geRq---e~r~-~-~~nvlv~~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 268 GIQEEAPSLGKPVVNIRDSGERQ---EGRE-R-GSNVLVGTDPEAIIQAIEKALSD 318 (346)
T ss_dssp HHHHHGGGGT--EEECSSS-S-H---HHHH-T-TSEEEETSSHHHHHHHHHHHHH-
T ss_pred cHHHHHHHhCCeEEEecCCCCCH---HHHh-h-cceEEeCCCHHHHHHHHHHHHhC
Confidence 777 9999999999992222222 1111 1 2222 27899999999999976
No 134
>PLN02939 transferase, transferring glycosyl groups
Probab=65.33 E-value=24 Score=31.30 Aligned_cols=53 Identities=11% Similarity=0.122 Sum_probs=31.9
Q ss_pred hhHHHHHHcCCCeEecCCcc--hhhhH--HHHHHHHhccccc---cCHHHHHHHHHHhhc
Q 047426 7 SSILESVAAGVPMATWPLYE--EQFLK--KKLVTDALRIGVG---VEKDDITKALAELMV 59 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~--DQ~~n--a~~~~~~~g~g~~---~~~~~i~~ai~~vl~ 59 (109)
.+.+||+++|+|.|+....+ |...+ ...+...-+.|+. .+.+.+..+|.+++.
T Consensus 871 LvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 871 LTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFN 930 (977)
T ss_pred HHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHH
Confidence 47899999999999876544 21111 0111011134544 577888888888764
No 135
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=62.22 E-value=18 Score=31.05 Aligned_cols=85 Identities=9% Similarity=0.051 Sum_probs=48.2
Q ss_pred Chh-hHHHHHHcCCC---eEecCCcchhhhHHHHHHHHhc-cccc---cCHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Q 047426 5 EWS-SILESVAAGVP---MATWPLYEEQFLKKKLVTDALR-IGVG---VEKDDITKALAELMVSKSANNMRNKTKGPGKT 76 (109)
Q Consensus 5 G~~-s~~Eal~~GvP---~i~~P~~~DQ~~na~~~~~~~g-~g~~---~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~ 76 (109)
|+| ..+|++++|.| ++..+-++- .+..+ | -|+. .+.+.+.++|.+++..+. ++.+++.+++.+.
T Consensus 387 GmnLv~lEamA~g~p~~gvlVlSe~~G---~~~~l----~~~allVnP~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~ 458 (797)
T PLN03063 387 GMNLVSYEFVACQKAKKGVLVLSEFAG---AGQSL----GAGALLVNPWNITEVSSAIKEALNMSD-EERETRHRHNFQY 458 (797)
T ss_pred ccCcchhhHheeecCCCCCEEeeCCcC---chhhh----cCCeEEECCCCHHHHHHHHHHHHhCCH-HHHHHHHHHHHHh
Confidence 554 56899999999 444443321 11111 3 3444 678899999999988331 1344444444444
Q ss_pred HHHhHHcCCChHHHHHHHHHHHHhcc
Q 047426 77 ARKAVEEGGSSFSDLNALLEDLISIC 102 (109)
Q Consensus 77 ~~~a~~~gGss~~~l~~~v~~l~~~~ 102 (109)
+. .-+...-.+.|++.+...+
T Consensus 459 v~-----~~~~~~Wa~~fl~~l~~~~ 479 (797)
T PLN03063 459 VK-----THSAQKWADDFMSELNDII 479 (797)
T ss_pred hh-----hCCHHHHHHHHHHHHHHHh
Confidence 33 1344444556666665554
No 136
>PRK10125 putative glycosyl transferase; Provisional
Probab=62.09 E-value=7 Score=30.50 Aligned_cols=21 Identities=19% Similarity=0.140 Sum_probs=18.4
Q ss_pred hhhHHHHHHcCCCeEecCCcc
Q 047426 6 WSSILESVAAGVPMATWPLYE 26 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~ 26 (109)
.++++||+++|+|+|+....+
T Consensus 320 p~vilEAmA~G~PVVat~~gG 340 (405)
T PRK10125 320 PLILCEALSIGVPVIATHSDA 340 (405)
T ss_pred cCHHHHHHHcCCCEEEeCCCC
Confidence 468999999999999998765
No 137
>TIGR00624 tag DNA-3-methyladenine glycosylase I. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=62.03 E-value=39 Score=23.93 Aligned_cols=55 Identities=11% Similarity=0.188 Sum_probs=35.4
Q ss_pred ecCCcchhhhHHHHHHHHhccccc-----------------cCHHHH----HHHHHHhhcccchHHHHHHHHHHHHHHH
Q 047426 21 TWPLYEEQFLKKKLVTDALRIGVG-----------------VEKDDI----TKALAELMVSKSANNMRNKTKGPGKTAR 78 (109)
Q Consensus 21 ~~P~~~DQ~~na~~~~~~~g~g~~-----------------~~~~~i----~~ai~~vl~~~~~~~~r~~a~~l~~~~~ 78 (109)
+.|..-||.+...+.-+.+.+|+. ++.+.| .+-+.++|.++ .+-+|=.|+++.+.
T Consensus 21 G~p~~dd~~LFE~L~Le~fQAGLSW~tIL~Kr~~fr~aF~~Fd~~~VA~~~e~~ie~L~~d~---~IIRnr~KI~Avi~ 96 (179)
T TIGR00624 21 GVPLRDSVALFERMSLEGFQAGLSWITVLRKRENYRRAFSGFDIVKVARMTDADVERLLQDD---GIIRNRGKIEATIA 96 (179)
T ss_pred CCcCcCCHHHHHHHHHHHHhCcCCHHHHHHhHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc---cchhhHHHHHHHHH
Confidence 567789999998887777888887 344444 35566677765 34444444444443
No 138
>PRK14099 glycogen synthase; Provisional
Probab=61.75 E-value=35 Score=27.41 Aligned_cols=51 Identities=18% Similarity=0.151 Sum_probs=27.9
Q ss_pred hhHHHHHHcCCCeEecCCcc--hhhhHHHHHHHH--hccccc---cCHHHHHHHHHHh
Q 047426 7 SSILESVAAGVPMATWPLYE--EQFLKKKLVTDA--LRIGVG---VEKDDITKALAEL 57 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~--DQ~~na~~~~~~--~g~g~~---~~~~~i~~ai~~v 57 (109)
.+.+||+++|+|.|+....+ |.........+. -+.|+. -+.+++.+++.++
T Consensus 384 l~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a 441 (485)
T PRK14099 384 LTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKT 441 (485)
T ss_pred HHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHH
Confidence 57899999996655554322 211111000000 024554 5788899999873
No 139
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=61.41 E-value=28 Score=27.63 Aligned_cols=77 Identities=18% Similarity=0.186 Sum_probs=48.7
Q ss_pred HHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--cCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHHcCCC
Q 047426 9 ILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--VEKDDITKALAELMVSKSANNMRNKTKGPGKTARKAVEEGGS 86 (109)
Q Consensus 9 ~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGs 86 (109)
.-||...|+|.+++=..-++|. .+ +. |.-+. .+.+.|.+++..+++++ .+.++ +..+..+-|.
T Consensus 293 qEEAp~lg~Pvl~lR~~TERPE---~v-~a-gt~~lvg~~~~~i~~~~~~ll~~~---~~~~~-------m~~~~npYgd 357 (383)
T COG0381 293 QEEAPSLGKPVLVLRDTTERPE---GV-EA-GTNILVGTDEENILDAATELLEDE---EFYER-------MSNAKNPYGD 357 (383)
T ss_pred hhhHHhcCCcEEeeccCCCCcc---ce-ec-CceEEeCccHHHHHHHHHHHhhCh---HHHHH-------HhcccCCCcC
Confidence 4689999999999977777776 22 22 33333 67899999999999876 33332 2233334333
Q ss_pred hHHHHHHHHHHHHhc
Q 047426 87 SFSDLNALLEDLISI 101 (109)
Q Consensus 87 s~~~l~~~v~~l~~~ 101 (109)
.. +-.++++.+...
T Consensus 358 g~-as~rIv~~l~~~ 371 (383)
T COG0381 358 GN-ASERIVEILLNY 371 (383)
T ss_pred cc-hHHHHHHHHHHH
Confidence 33 445666666544
No 140
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=61.37 E-value=28 Score=29.15 Aligned_cols=19 Identities=26% Similarity=0.251 Sum_probs=16.6
Q ss_pred hhHHHHHHcCCCeEecCCc
Q 047426 7 SSILESVAAGVPMATWPLY 25 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~ 25 (109)
..++||+++|+|+|+-...
T Consensus 489 ~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 489 YTPAECTVMGIPSITTNLS 507 (590)
T ss_pred cHHHHHHHcCCCEEEccCc
Confidence 4789999999999998764
No 141
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=60.29 E-value=26 Score=27.85 Aligned_cols=49 Identities=10% Similarity=-0.031 Sum_probs=31.2
Q ss_pred Ch-hhHHHHHHcCCC----eEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhccc
Q 047426 5 EW-SSILESVAAGVP----MATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 5 G~-~s~~Eal~~GvP----~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~ 61 (109)
|+ .+++||+++|+| +|+--..+-... . .-|+. .+.+++.++|.+++.++
T Consensus 372 g~~lv~lEAma~g~p~~g~vV~S~~~G~~~~----~----~~g~lv~p~d~~~la~ai~~~l~~~ 428 (460)
T cd03788 372 GMNLVAKEYVACQDDDPGVLILSEFAGAAEE----L----SGALLVNPYDIDEVADAIHRALTMP 428 (460)
T ss_pred ccCcccceeEEEecCCCceEEEeccccchhh----c----CCCEEECCCCHHHHHHHHHHHHcCC
Confidence 44 467999999999 544432221111 1 23443 47889999999999854
No 142
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=56.66 E-value=19 Score=27.33 Aligned_cols=39 Identities=21% Similarity=0.243 Sum_probs=30.9
Q ss_pred CChhhHH--HHHHcCCCeEecCCcchhhhHHHHHHHHhccc
Q 047426 4 YEWSSIL--ESVAAGVPMATWPLYEEQFLKKKLVTDALRIG 42 (109)
Q Consensus 4 gG~~s~~--Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g 42 (109)
||||+++ -|-.+||-++++-+...|..+++......|+.
T Consensus 81 CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 81 CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 9999764 45667999999999999999997643443766
No 143
>PF11740 KfrA_N: Plasmid replication region DNA-binding N-term; InterPro: IPR021104 The KfrA family of protiens are encoded on plasmids, generally in or near gene clusters invloved in stable inheritance functions. These proteins are thought to form an all-helical structure, consisting of an N-terminal helix-turn-helix DNA binding domain and an extended coiled-coil tail. The best-characterised KfrA protein, encoded on the broad host-range Plasmid RK2, is a site-specific DNA-binding protein whose operator overlaps its own promoter. The DNA-binding domain is essential for function, while the coiled-coil domain is probably responsible for formation of multimers, and may provide an example of a bridge to host structures required for plasmid partitioning []. This entry represents the N-terminal DNA-binding domain.
Probab=55.01 E-value=30 Score=22.01 Aligned_cols=46 Identities=20% Similarity=0.333 Sum_probs=20.9
Q ss_pred CHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhc
Q 047426 46 EKDDITKALAELMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLISI 101 (109)
Q Consensus 46 ~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~ 101 (109)
|.++|..+..++..... +=.+..+++.+ |+.|...+.++++.+...
T Consensus 2 T~e~V~~Aa~~L~~~G~----~pT~~~Vr~~l------G~GS~~ti~~~l~~w~~~ 47 (120)
T PF11740_consen 2 TYEDVIEAADELLAAGK----KPTVRAVRERL------GGGSMSTISKHLKEWREE 47 (120)
T ss_pred cHHHHHHHHHHHHHcCC----CCCHHHHHHHH------CCCCHHHHHHHHHHHHHh
Confidence 45555555555554221 11233333332 245555555555555443
No 144
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=53.18 E-value=32 Score=18.46 Aligned_cols=26 Identities=23% Similarity=0.353 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHhhcccchHHHHHHHHHH
Q 047426 46 EKDDITKALAELMVSKSANNMRNKTKGP 73 (109)
Q Consensus 46 ~~~~i~~ai~~vl~~~~~~~~r~~a~~l 73 (109)
+.+++..||..+..+. .++++.|+++
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 4678999999998764 3677776654
No 145
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.56 E-value=1e+02 Score=24.26 Aligned_cols=51 Identities=20% Similarity=0.268 Sum_probs=33.5
Q ss_pred HHHHcCCCeEecCCcchhhhH--HHHHHHHhccccc-cCH-HHHH-HHHHHhhccc
Q 047426 11 ESVAAGVPMATWPLYEEQFLK--KKLVTDALRIGVG-VEK-DDIT-KALAELMVSK 61 (109)
Q Consensus 11 Eal~~GvP~i~~P~~~DQ~~n--a~~~~~~~g~g~~-~~~-~~i~-~ai~~vl~~~ 61 (109)
.++--|+|+|.+|=.+-|+.. |.+=...+|..+. +.+ .... .+.++++.++
T Consensus 325 QavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~aq~a~~~~q~ll~dp 380 (412)
T COG4370 325 QAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPEAQAAAQAVQELLGDP 380 (412)
T ss_pred HhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCchhhHHHHHHHHhcCh
Confidence 456789999999999988654 5554455677776 322 2333 3444588876
No 146
>COG1400 SEC65 Signal recognition particle 19 kDa protein [Intracellular trafficking and secretion]
Probab=46.20 E-value=14 Score=23.51 Aligned_cols=80 Identities=23% Similarity=0.265 Sum_probs=43.5
Q ss_pred CeEecCCcchhhh---HHHHHHHHhccccc-cCHHHHHHHHHHhhccc---chHHHHHHHHHHHHHHHHhHHcCCChHHH
Q 047426 18 PMATWPLYEEQFL---KKKLVTDALRIGVG-VEKDDITKALAELMVSK---SANNMRNKTKGPGKTARKAVEEGGSSFSD 90 (109)
Q Consensus 18 P~i~~P~~~DQ~~---na~~~~~~~g~g~~-~~~~~i~~ai~~vl~~~---~~~~~r~~a~~l~~~~~~a~~~gGss~~~ 90 (109)
-+|.||.+.|... ..+++- . ..++. .+.++|.++++++=-+. ..+.|=+ ..|....+-.++..|+=..-
T Consensus 3 ~~vlwp~YfDs~~srs~GRrvp-k-~laV~~P~~~ei~~a~~~LGl~~~v~~dk~yPr--~~w~~~g~vive~~~~K~~~ 78 (93)
T COG1400 3 RIVLWPAYFDSDLSRSEGRRVP-K-ELAVENPSLEEIAEALRELGLKPKVERDKKYPR--LWWEISGRVIVESNGKKSKL 78 (93)
T ss_pred ceEEeehhhcCccChhhccccc-h-hhcccCCCHHHHHHHHHHcCCCeeechhhcCCC--chhhhCceEEEecCccHhHH
Confidence 3789999998763 334443 2 45666 88999999999883221 0011211 23333333334445544444
Q ss_pred HHHHHHHHHhc
Q 047426 91 LNALLEDLISI 101 (109)
Q Consensus 91 l~~~v~~l~~~ 101 (109)
+..+...|...
T Consensus 79 lk~ia~~lr~~ 89 (93)
T COG1400 79 LKAIAAKLREK 89 (93)
T ss_pred HHHHHHHHHHh
Confidence 55555555443
No 147
>PF13331 DUF4093: Domain of unknown function (DUF4093)
Probab=45.55 E-value=40 Score=20.92 Aligned_cols=58 Identities=19% Similarity=0.304 Sum_probs=35.2
Q ss_pred cccc-cCHHHHHHHHHHhhcccc-hH-H-H------------HHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhc
Q 047426 41 IGVG-VEKDDITKALAELMVSKS-AN-N-M------------RNKTKGPGKTARKAVEEGGSSFSDLNALLEDLISI 101 (109)
Q Consensus 41 ~g~~-~~~~~i~~ai~~vl~~~~-~~-~-~------------r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~ 101 (109)
+||+ .+++.|.+|+..+..... .. . + ..++++.|+.+-+.. |=.+.|-..|++.+..+
T Consensus 2 iGVE~A~~e~I~~AL~~~~~~~~~~~~~~it~~dL~~~GL~g~~~s~~rR~~l~~~L---~iGy~N~KqllkrLN~f 75 (87)
T PF13331_consen 2 IGVEHASPEAIREALENARTEDEEPKESEITWEDLIELGLIGGPDSKERREKLGEYL---GIGYGNAKQLLKRLNMF 75 (87)
T ss_pred ccccCCCHHHHHHHHHHhCccccCCccCcCCHHHHHHCCCCCCccHHHHHHHHHHHH---CCCCCCHHHHHHHHHHc
Confidence 5777 888999999988876221 01 0 1 124455555555554 34555667777777766
No 148
>COG1043 LpxA Acyl-[acyl carrier protein]
Probab=42.94 E-value=82 Score=23.67 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=33.9
Q ss_pred cCHHHH---HHHHHHhhcccchHHHHHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhccc
Q 047426 45 VEKDDI---TKALAELMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLISICS 103 (109)
Q Consensus 45 ~~~~~i---~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~~~ 103 (109)
+++++| +++.+.+...+ ..+++++.++.+.+.+ ..++.+|++.+.+...
T Consensus 205 f~~e~i~alr~ayk~lfr~~--~~~~e~~~~i~~~~~~--------~~~v~~~~dFi~~s~r 256 (260)
T COG1043 205 FSREEIHALRKAYKLLFRSG--LTLREALEEIAEEYAD--------NPEVKEFIDFIASSSR 256 (260)
T ss_pred CCHHHHHHHHHHHHHHeeCC--CCHHHHHHHHHHHhcC--------ChHHHHHHHHHhhccc
Confidence 777765 56666666644 3799999888776543 2378899998877543
No 149
>PF02433 FixO: Cytochrome C oxidase, mono-heme subunit/FixO; InterPro: IPR003468 Cytochrome cbb3 oxidases are found almost exclusively in Proteobacteria, and represent a distinctive class of proton-pumping respiratory haem-copper oxidases (HCO) that lack many of the key structural features that contribute to the reaction cycle of the intensely studied mitochondrial cytochrome c oxidase (CcO) []. Cytochrome cbb3 oxidases are required both to support symbiotic nitrogen fixation, whilst ensuring that the oxygen-labile nitrogenase is not compromised. Cytochrome cbb3 oxidases consist of four subunits: FixN (or CcoN), FixO (or CcoO), FixP (or CcoP) and FixQ (or CcoQ). The catalytic core is comprised of subunits FixN, FixO and FixP, where FixN acts as the catalytic subunit, and Fix O and FixP are membrane-bound mono- and di-haem cytochromes c, respectively. The FixQ subunit protects the core complex in the presence of oxygen from proteolytic degradation []. This entry represents the mono-haem FixO subunit.
Probab=39.28 E-value=1.2e+02 Score=22.41 Aligned_cols=88 Identities=18% Similarity=0.235 Sum_probs=50.2
Q ss_pred HHcCCCeEecCCcchhhhHHHHHHHH----hccccccCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHh----HHcC
Q 047426 13 VAAGVPMATWPLYEEQFLKKKLVTDA----LRIGVGVEKDDITKALAELMVSKSANNMRNKTKGPGKTARKA----VEEG 84 (109)
Q Consensus 13 l~~GvP~i~~P~~~DQ~~na~~~~~~----~g~g~~~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a----~~~g 84 (109)
+..+-.|-..|+..++..+...+.+. -.+|+..+.+++..+...+-...+ ..-+ +..+.+...++ ....
T Consensus 128 v~p~SiMP~Y~~L~~~~~d~~~~~~~~~~l~~lgvPY~~~~i~~a~~~~~~qa~--~~~~-~~~~~~~~~~~~~~~~~~~ 204 (226)
T PF02433_consen 128 VVPGSIMPSYPWLFENKLDGEDIQAKMKALRTLGVPYTDEEIANAPADVEGQAK--PIAD-ADDLVERYKKAQARGFDGE 204 (226)
T ss_pred hCCCCCCCCChhHhhccCcHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhccc--cccc-HHHHHHHhhhhhhcccccC
Confidence 55666777788888776655443333 245766888888888877655321 1111 22233222211 1112
Q ss_pred CChHHHHHHHHHHHHhccc
Q 047426 85 GSSFSDLNALLEDLISICS 103 (109)
Q Consensus 85 Gss~~~l~~~v~~l~~~~~ 103 (109)
......++.||..|..++.
T Consensus 205 ~~~~~Ei~ALIAYLQ~LGt 223 (226)
T PF02433_consen 205 PGEDTEIVALIAYLQRLGT 223 (226)
T ss_pred CCCccHHHHHHHHHHHccc
Confidence 3446788899988887753
No 150
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function.
Probab=38.77 E-value=37 Score=26.67 Aligned_cols=28 Identities=11% Similarity=0.262 Sum_probs=19.0
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHH
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKK 33 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~ 33 (109)
|+=...-+..=.|++++|++.|+..|.-
T Consensus 15 ~~y~~p~~~~llp~~~~pfls~~qk~y~ 42 (401)
T PF06785_consen 15 YNYFFPVAAFLLPLVCYPFLSDSQKNYG 42 (401)
T ss_pred HhhhhhHHHHHHHHhHhhhcCHHHHhcc
Confidence 3334444555679999999998766643
No 151
>COG2818 Tag 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]
Probab=38.35 E-value=1.5e+02 Score=21.27 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=19.1
Q ss_pred ecCCcchhhhHHHHHHHHhccccc
Q 047426 21 TWPLYEEQFLKKKLVTDALRIGVG 44 (109)
Q Consensus 21 ~~P~~~DQ~~na~~~~~~~g~g~~ 44 (109)
+.|+..||.+.....-+....|+.
T Consensus 23 G~p~~Dd~~LFE~l~Le~fQAGLS 46 (188)
T COG2818 23 GVPLHDDQRLFELLCLEGFQAGLS 46 (188)
T ss_pred CCCCCChHHHHHHHHHHHHhccch
Confidence 567888998888877777788876
No 152
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=37.96 E-value=48 Score=25.07 Aligned_cols=82 Identities=15% Similarity=0.149 Sum_probs=43.3
Q ss_pred hHHHHHHcCCCeEecCCcchhhhHHHHHH---HHhccccc-cCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHHc
Q 047426 8 SILESVAAGVPMATWPLYEEQFLKKKLVT---DALRIGVG-VEKDDITKALAELMVSKSANNMRNKTKGPGKTARKAVEE 83 (109)
Q Consensus 8 s~~Eal~~GvP~i~~P~~~DQ~~na~~~~---~~~g~g~~-~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~ 83 (109)
-+.|.+..+.|+|....-.|.+...+-+. +....|.. -+.+++.++|..++.+.. .++++-+++.+.+-. ..+
T Consensus 280 i~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~~~~eL~~~i~~~~~~~~--~~~~~~~~~~~~~~~-~~D 356 (369)
T PF04464_consen 280 IIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVYNFEELIEAIENIIENPD--EYKEKREKFRDKFFK-YND 356 (369)
T ss_dssp HHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EESSHHHHHHHHTTHHHHHH--HTHHHHHHHHHHHST-T--
T ss_pred HHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeCCHHHHHHHHHhhhhCCH--HHHHHHHHHHHHhCC-CCC
Confidence 45789999999997754444432221110 01123333 578999999998887542 455556666666654 235
Q ss_pred CCChHHHHH
Q 047426 84 GGSSFSDLN 92 (109)
Q Consensus 84 gGss~~~l~ 92 (109)
|.++..-++
T Consensus 357 g~s~eri~~ 365 (369)
T PF04464_consen 357 GNSSERIVN 365 (369)
T ss_dssp S-HHHHHHH
T ss_pred chHHHHHHH
Confidence 555544333
No 153
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=35.72 E-value=56 Score=27.63 Aligned_cols=87 Identities=11% Similarity=0.009 Sum_probs=46.0
Q ss_pred Ch-hhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc---cCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHh
Q 047426 5 EW-SSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG---VEKDDITKALAELMVSKSANNMRNKTKGPGKTARKA 80 (109)
Q Consensus 5 G~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~---~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a 80 (109)
|+ ..++|++++|+|-.+.|+..+----+..+ .-|+. .+.+++.++|.+++..+. ++.+++..++++.+.
T Consensus 373 G~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv~P~d~~~la~ai~~~l~~~~-~e~~~r~~~~~~~v~-- 445 (726)
T PRK14501 373 GMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLVNPNDIEGIAAAIKRALEMPE-EEQRERMQAMQERLR-- 445 (726)
T ss_pred ccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEECCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH--
Confidence 44 35688999966522233222111111112 12443 578899999999987542 133333444443332
Q ss_pred HHcCCChHHHHHHHHHHHHhc
Q 047426 81 VEEGGSSFSDLNALLEDLISI 101 (109)
Q Consensus 81 ~~~gGss~~~l~~~v~~l~~~ 101 (109)
.-+...-.+.|++.+...
T Consensus 446 ---~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 446 ---RYDVHKWASDFLDELREA 463 (726)
T ss_pred ---hCCHHHHHHHHHHHHHHH
Confidence 245666666777766655
No 154
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=34.44 E-value=1.1e+02 Score=20.75 Aligned_cols=18 Identities=22% Similarity=0.231 Sum_probs=15.6
Q ss_pred hhhHHHHHHcCCCeEecC
Q 047426 6 WSSILESVAAGVPMATWP 23 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P 23 (109)
.+++.+|...++|||.+.
T Consensus 75 ~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 75 LNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 457789999999999995
No 155
>COG0177 Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]
Probab=33.91 E-value=88 Score=22.72 Aligned_cols=46 Identities=22% Similarity=0.341 Sum_probs=34.6
Q ss_pred HHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccccCHHHHHHHHHHhhcc
Q 047426 9 ILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVGVEKDDITKALAELMVS 60 (109)
Q Consensus 9 ~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~i~~ai~~vl~~ 60 (109)
+.=+.++|.| ++|+ ...-.|++..||+.-.-+++++.+.+.+++-.
T Consensus 124 vVL~~a~g~p--~i~V----DTHV~Rvs~R~gl~~~~~p~~ve~~L~~~iP~ 169 (211)
T COG0177 124 VVLSFAFGIP--AIAV----DTHVHRVSNRLGLVPGKTPEEVEEALMKLIPK 169 (211)
T ss_pred HHHHhhcCCC--cccc----cchHHHHHHHhCCCCCCCHHHHHHHHHHHCCH
Confidence 4445788999 5554 45677888887777668899999999999863
No 156
>smart00526 H15 Domain in histone families 1 and 5.
Probab=32.74 E-value=80 Score=17.96 Aligned_cols=15 Identities=27% Similarity=0.479 Sum_probs=8.4
Q ss_pred cCCChHHHHHHHHHH
Q 047426 83 EGGSSFSDLNALLED 97 (109)
Q Consensus 83 ~gGss~~~l~~~v~~ 97 (109)
+.|+|...+.+|+..
T Consensus 21 r~GsS~~aI~kyi~~ 35 (66)
T smart00526 21 RKGSSLQAIKKYIEA 35 (66)
T ss_pred CCCCCHHHHHHHHHH
Confidence 355666666655544
No 157
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=32.16 E-value=72 Score=27.02 Aligned_cols=69 Identities=20% Similarity=0.244 Sum_probs=36.3
Q ss_pred hHHHHHHcCCCeEecCCcc-hhhhHHHH-HHHHhccccc----cCHHHHHHHHHHhhcc------cchHHHHHHHHHHHH
Q 047426 8 SILESVAAGVPMATWPLYE-EQFLKKKL-VTDALRIGVG----VEKDDITKALAELMVS------KSANNMRNKTKGPGK 75 (109)
Q Consensus 8 s~~Eal~~GvP~i~~P~~~-DQ~~na~~-~~~~~g~g~~----~~~~~i~~ai~~vl~~------~~~~~~r~~a~~l~~ 75 (109)
+-+|++++|||-|+-=+.+ -++.+-.. -....|+-|. -+.+++.+.+.+.|.+ .+-...|.++.+|++
T Consensus 485 TPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~ 564 (633)
T PF05693_consen 485 TPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSD 564 (633)
T ss_dssp HHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGG
T ss_pred ChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 5699999999999987643 22222111 1122355554 4566666666655531 112246666666665
Q ss_pred H
Q 047426 76 T 76 (109)
Q Consensus 76 ~ 76 (109)
.
T Consensus 565 ~ 565 (633)
T PF05693_consen 565 L 565 (633)
T ss_dssp G
T ss_pred h
Confidence 5
No 158
>TIGR00781 ccoO cytochrome c oxidase, cbb3-type, subunit II. This model describes the monoheme subunit of the cbb3-type cytochrome oxidase, found in a subset of Proteobacterial species. Species having this protein also have CcoN (subunit I, containing copper and two heme groups), CcoP (subunit III, containing two hemes), and CcoQ (essential for incorporation of the prosthetic groups).
Probab=31.77 E-value=1.7e+02 Score=21.67 Aligned_cols=88 Identities=18% Similarity=0.241 Sum_probs=47.9
Q ss_pred cCCCeEecCCcchhhhHHHHHHHHh----ccccccCHHHHHHHHHHhhcccchH-HHHHHHHHHHHHHH-HhHHcCCChH
Q 047426 15 AGVPMATWPLYEEQFLKKKLVTDAL----RIGVGVEKDDITKALAELMVSKSAN-NMRNKTKGPGKTAR-KAVEEGGSSF 88 (109)
Q Consensus 15 ~GvP~i~~P~~~DQ~~na~~~~~~~----g~g~~~~~~~i~~ai~~vl~~~~~~-~~r~~a~~l~~~~~-~a~~~gGss~ 88 (109)
.|.-|-..|.+.++..+...+...+ .+|+..+.++|..+-.....+.... ....-+.+++.... +.+ + |...
T Consensus 130 PgSiMP~y~~L~~~~ld~~~~~~~~~~~~~~GVPYtd~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 207 (232)
T TIGR00781 130 PESIMPAYKHLATKKVDVDTAYAEAKTQKKVGVPYDDEMIAKAGADEEAQKDPNADAKKLTADYKDKRVLEAF-D-GGPL 207 (232)
T ss_pred CCCCCCCCcccccccCCHHHHHHHHHHHHhcCCCCCHHHHHHhHHHHHhCCCccchhHHHHHHhhhhhhhhcc-c-CCCc
Confidence 4555666777777666544333222 3587788999988866555433110 11222222221111 111 2 3347
Q ss_pred HHHHHHHHHHHhcccc
Q 047426 89 SDLNALLEDLISICSR 104 (109)
Q Consensus 89 ~~l~~~v~~l~~~~~~ 104 (109)
..++.+|..|..++..
T Consensus 208 tE~~ALiAYLQ~LGt~ 223 (232)
T TIGR00781 208 TEMDALVAYLQSLGTS 223 (232)
T ss_pred hHHHHHHHHHHHhcch
Confidence 8899999998887543
No 159
>COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism]
Probab=31.64 E-value=16 Score=26.49 Aligned_cols=19 Identities=16% Similarity=0.529 Sum_probs=14.8
Q ss_pred CccCChhhH----HHHHHcCCCe
Q 047426 1 MTNYEWSSI----LESVAAGVPM 19 (109)
Q Consensus 1 vtHgG~~s~----~Eal~~GvP~ 19 (109)
|.|-|||++ -..+..|+|-
T Consensus 117 vPHMGWN~l~~~~~~~l~~gi~~ 139 (204)
T COG0118 117 VPHMGWNQVEFVRGHPLFKGIPD 139 (204)
T ss_pred CCccccceeeccCCChhhcCCCC
Confidence 579999999 4578888775
No 160
>PF03342 Rhabdo_M1: Rhabdovirus M1 matrix protein (M1 polymerase-associated protein); InterPro: IPR005010 This is a family of phosphoproteins of unknown function expressed by Rhadovirus.
Probab=29.78 E-value=1.1e+02 Score=22.12 Aligned_cols=14 Identities=21% Similarity=0.287 Sum_probs=10.7
Q ss_pred cCCcchhhhHHHHH
Q 047426 22 WPLYEEQFLKKKLV 35 (109)
Q Consensus 22 ~P~~~DQ~~na~~~ 35 (109)
-|+-.||..|.+-+
T Consensus 145 k~LD~DQV~~eRAL 158 (219)
T PF03342_consen 145 KPLDGDQVKAERAL 158 (219)
T ss_pred CCCCHHHHHHHHHh
Confidence 46778999888755
No 161
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=29.48 E-value=85 Score=23.44 Aligned_cols=19 Identities=26% Similarity=0.513 Sum_probs=16.9
Q ss_pred hhhHHHHHHcCCCeEecCC
Q 047426 6 WSSILESVAAGVPMATWPL 24 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~ 24 (109)
.+..+||..+|+|-|++-+
T Consensus 115 VgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 115 VAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred HHHHHHHHHcCCCeEEEEc
Confidence 4678999999999999987
No 162
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=29.12 E-value=47 Score=22.76 Aligned_cols=18 Identities=22% Similarity=0.497 Sum_probs=15.7
Q ss_pred hhhHHHHHHcCCCeEecC
Q 047426 6 WSSILESVAAGVPMATWP 23 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P 23 (109)
.+++.||...++|||.+.
T Consensus 76 ~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 76 LPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred hHHHHHHHhcCCCEEEEE
Confidence 457789999999999995
No 163
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=28.70 E-value=39 Score=24.54 Aligned_cols=15 Identities=27% Similarity=0.430 Sum_probs=13.1
Q ss_pred HHHHHHcCCCeEecC
Q 047426 9 ILESVAAGVPMATWP 23 (109)
Q Consensus 9 ~~Eal~~GvP~i~~P 23 (109)
-+||+.+|+|+++.-
T Consensus 211 GlEAll~gkpVi~~G 225 (269)
T PF05159_consen 211 GLEALLHGKPVIVFG 225 (269)
T ss_pred HHHHHHcCCceEEec
Confidence 489999999999863
No 164
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=28.54 E-value=3e+02 Score=21.89 Aligned_cols=52 Identities=15% Similarity=0.227 Sum_probs=34.4
Q ss_pred hhhHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccc---cc---cCHHHHHHHHHHhhccc
Q 047426 6 WSSILESVAAGVPMATWPLYEEQFLKKKLVTDALRIG---VG---VEKDDITKALAELMVSK 61 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g---~~---~~~~~i~~ai~~vl~~~ 61 (109)
+.|+.=|+..|+|.|++- -++.....+ +.+|+- +. ++.+.+...+.+.+.+-
T Consensus 294 ~HsaI~al~~g~p~i~i~---Y~~K~~~l~-~~~gl~~~~~~i~~~~~~~l~~~~~e~~~~~ 351 (385)
T COG2327 294 LHSAIMALAFGVPAIAIA---YDPKVRGLM-QDLGLPGFAIDIDPLDAEILSAVVLERLTKL 351 (385)
T ss_pred hHHHHHHHhcCCCeEEEe---ecHHHHHHH-HHcCCCcccccCCCCchHHHHHHHHHHHhcc
Confidence 468888999999999984 344444444 343543 11 67778887777777643
No 165
>PF06345 Drf_DAD: DRF Autoregulatory Domain; InterPro: IPR010465 This domain is found in Diaphanous-related formins (Drfs). It binds the N-terminal GTPase-binding domain; this link is broken when GTP-bound Rho binds to the GBD and activates the protein. The addition of diaphanous activating domains (DAD) to mammalian cells induces actin filament formation, stabilises microtubules, and activates serum-response mediated transcription [].; PDB: 3O4X_H 3OBV_E 2BAP_C 2F31_B.
Probab=27.87 E-value=48 Score=13.76 Aligned_cols=12 Identities=33% Similarity=0.584 Sum_probs=8.7
Q ss_pred hhhHHHHHHcCC
Q 047426 6 WSSILESVAAGV 17 (109)
Q Consensus 6 ~~s~~Eal~~Gv 17 (109)
+-|++|++..|.
T Consensus 3 mdsllealqtg~ 14 (15)
T PF06345_consen 3 MDSLLEALQTGS 14 (15)
T ss_dssp HHHHHHHHHHST
T ss_pred HHHHHHHHHccC
Confidence 468888887763
No 166
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=27.46 E-value=51 Score=22.41 Aligned_cols=18 Identities=6% Similarity=0.202 Sum_probs=15.9
Q ss_pred hhhHHHHHHcCCCeEecC
Q 047426 6 WSSILESVAAGVPMATWP 23 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P 23 (109)
.+++.+|...++|||.+.
T Consensus 79 ~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 79 LNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred HHHHHHHHhcCCCEEEEe
Confidence 457899999999999996
No 167
>PF10163 EnY2: Transcription factor e(y)2; InterPro: IPR018783 Enhancer of yellow 2 (EnY2) is a small transcription factor which is combined in a complex with the TAFII40 protein []. This protein is conserved from protozoa to humans.; PDB: 4DHX_C 3FWC_P 3M99_C 3KIK_A 3KJL_C 3FWB_C 3MHS_B 3MHH_B.
Probab=27.04 E-value=97 Score=18.91 Aligned_cols=48 Identities=19% Similarity=0.361 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHH
Q 047426 46 EKDDITKALAELMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLI 99 (109)
Q Consensus 46 ~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~ 99 (109)
..+.|...++.-+... .+++..+. .+++.+..+|....+++.+++.+.
T Consensus 15 e~~~L~~~L~~rL~e~---GW~d~vr~---~~re~i~~~g~~~~~~~~l~~~i~ 62 (86)
T PF10163_consen 15 EYERLKELLRQRLIEC---GWRDEVRQ---LCREIIRERGIDNLTFEDLLEEIT 62 (86)
T ss_dssp HHHHHHHHHHHHHHHT---THHHHHHH---HHHHHHHHH-TTTSBHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHC---ChHHHHHH---HHHHHHHhhCCCCCCHHHHHHHHH
Confidence 3456666666554421 24444333 333333444555556666666554
No 168
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=27.03 E-value=64 Score=24.04 Aligned_cols=38 Identities=16% Similarity=0.133 Sum_probs=25.5
Q ss_pred CChhhHHHHH--HcCCCeEecCCcchhhhHHHHHHHHhcc
Q 047426 4 YEWSSILESV--AAGVPMATWPLYEEQFLKKKLVTDALRI 41 (109)
Q Consensus 4 gG~~s~~Eal--~~GvP~i~~P~~~DQ~~na~~~~~~~g~ 41 (109)
|||+++..-+ .+|+-+.++-+..+|...++.-....|+
T Consensus 71 cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl 110 (273)
T PF02353_consen 71 CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGL 110 (273)
T ss_dssp -TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTS
T ss_pred CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCC
Confidence 8999876543 3499999999999999999765544354
No 169
>PF09884 DUF2111: Uncharacterized protein conserved in archaea (DUF2111); InterPro: IPR012029 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, members of PIRSF036667 from PIRSF possess a domain homologous to these proteins fused within a signal transduction sensor protein containing PAS/PAC and GAF domains. Therefore, it is possible that members of this family are involved in signal transduction (possibly as a sensor).
Probab=26.71 E-value=18 Score=22.56 Aligned_cols=17 Identities=35% Similarity=0.569 Sum_probs=13.8
Q ss_pred HHHHcCCCeEecCCcch
Q 047426 11 ESVAAGVPMATWPLYEE 27 (109)
Q Consensus 11 Eal~~GvP~i~~P~~~D 27 (109)
++.+.|+|++..|+..+
T Consensus 53 ~G~Y~G~PViV~PI~~~ 69 (84)
T PF09884_consen 53 EGPYKGVPVIVAPIKDE 69 (84)
T ss_pred CcccCCeeEEEEEEEcC
Confidence 45789999999998654
No 170
>COG3245 CycB Cytochrome c5 [Energy production and conversion]
Probab=25.47 E-value=86 Score=20.93 Aligned_cols=25 Identities=4% Similarity=-0.016 Sum_probs=22.2
Q ss_pred HHcCCCeEecCCcchhhhHHHHHHH
Q 047426 13 VAAGVPMATWPLYEEQFLKKKLVTD 37 (109)
Q Consensus 13 l~~GvP~i~~P~~~DQ~~na~~~~~ 37 (109)
.+|+.|+.+.|..+|.-.++-|+.+
T Consensus 60 ~CHa~~~~GAPk~GdkAaW~PRiaq 84 (126)
T COG3245 60 ACHAAGLPGAPKTGDKAAWAPRIAQ 84 (126)
T ss_pred HhccCCCCCCCCCCchhhhhhHHHh
Confidence 6899999999999999999888753
No 171
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.39 E-value=1.4e+02 Score=22.27 Aligned_cols=46 Identities=11% Similarity=0.005 Sum_probs=31.3
Q ss_pred ccCChhhHHHHHH------cCCCeEecCCcchhhhHHHHHHHHhccccc--cCHHHHHHHHHHhhccc
Q 047426 2 TNYEWSSILESVA------AGVPMATWPLYEEQFLKKKLVTDALRIGVG--VEKDDITKALAELMVSK 61 (109)
Q Consensus 2 tHgG~~s~~Eal~------~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--~~~~~i~~ai~~vl~~~ 61 (109)
+-||=++++.++. .++|++++... .+|.- ++++++.+++.+++.++
T Consensus 41 ~iGGDGT~L~a~~~~~~~~~~iPilGIN~G--------------~lGFL~~~~~~~~~~~l~~i~~g~ 94 (265)
T PRK04885 41 SVGGDGTLLSAFHRYENQLDKVRFVGVHTG--------------HLGFYTDWRPFEVDKLVIALAKDP 94 (265)
T ss_pred EECCcHHHHHHHHHhcccCCCCeEEEEeCC--------------CceecccCCHHHHHHHHHHHHcCC
Confidence 4577788888865 47787777531 12322 67888888998888754
No 172
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=25.06 E-value=1.2e+02 Score=22.49 Aligned_cols=20 Identities=20% Similarity=0.323 Sum_probs=17.4
Q ss_pred hhhHHHHHHcCCCeEecCCc
Q 047426 6 WSSILESVAAGVPMATWPLY 25 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~ 25 (109)
.+..+||..+|+|-|++.+.
T Consensus 106 VgAA~ea~~~GiPaiA~S~~ 125 (250)
T PRK00346 106 VAAAMEGALLGIPAIAVSLA 125 (250)
T ss_pred HHHHHHHHhcCCCeEEEecc
Confidence 46779999999999999973
No 173
>PF01397 Terpene_synth: Terpene synthase, N-terminal domain; InterPro: IPR001906 Sequences containing this domain belong to the terpene synthase family. It has been suggested that this gene family be designated tps (for terpene synthase). Sequence comparisons reveal similarities between the monoterpene (C10) synthases, sesquiterpene (C15) synthases and the diterpene (C20) synthases. It has been split into six subgroups on the basis of phylogeny, called Tpsa-Tpsf []. Tpsa includes vetispiridiene synthase Q39979 from SWISSPROT, 5-epi- aristolochene synthase, Q40577 from SWISSPROT and (+)-delta-cadinene synthase P93665 from SWISSPROT . Tpsb includes (-)-limonene synthase, Q40322 from SWISSPROT. Tpsc includes copalyl diphosphate synthase (kaurene synthase A), O04408 from SWISSPROT. Tpsd includes taxadiene synthase, Q41594 from SWISSPROT, pinene synthase, O24475 from SWISSPROT and myrcene synthase, O24474 from SWISSPROT. Tpse includes ent-kaurene synthase B Q39548 from SWISSPROT. Tpsf includes linalool synthase Q9ZPN5 from SWISSPROT. In the fungus Phaeosphaeria sp. (strain L487) the synthesis of ent-kaurene from geranylgeranyl dophosphate is promoted by a single bifunctional protein [].; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 2ONH_A 2ONG_B 3P5R_A 3P5P_A 3N0F_A 3N0G_B 3PYB_A 3PYA_A 3G4F_A 3G4D_B ....
Probab=24.68 E-value=2.5e+02 Score=19.69 Aligned_cols=38 Identities=8% Similarity=0.110 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhcc
Q 047426 65 NMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLISIC 102 (109)
Q Consensus 65 ~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~~ 102 (109)
.+.+++.++++.++..+..-...-..--++|+.|..++
T Consensus 23 ~~~~~~~~Lk~~v~~~l~~~~~d~~~~L~lID~lqRLG 60 (183)
T PF01397_consen 23 KCKERAEELKEEVRNMLPASYPDPLEKLELIDTLQRLG 60 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHcC
Confidence 68889999999998887654433334447778777664
No 174
>KOG2635 consensus Medium subunit of clathrin adaptor complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.63 E-value=1.3e+02 Score=24.66 Aligned_cols=24 Identities=29% Similarity=0.459 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHhHHcCCCh
Q 047426 64 NNMRNKTKGPGKTARKAVEEGGSS 87 (109)
Q Consensus 64 ~~~r~~a~~l~~~~~~a~~~gGss 87 (109)
+++|++|++|+..-.++.++||+.
T Consensus 157 q~mkrKaKElqr~r~ea~rrgg~~ 180 (512)
T KOG2635|consen 157 QEMKRKAKELQRARKEAERRGGSL 180 (512)
T ss_pred HHHHHHHHHHHHHHHhhhcccccc
Confidence 468889999988777777777643
No 175
>cd04446 DEP_DEPDC4 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC4-like proteins. DEPDC4 is a DEP domain containing protein of unknown function.
Probab=24.41 E-value=50 Score=20.95 Aligned_cols=15 Identities=27% Similarity=0.738 Sum_probs=11.7
Q ss_pred hhhHHHHHHcCCCeE
Q 047426 6 WSSILESVAAGVPMA 20 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i 20 (109)
||++.+.+..|||+=
T Consensus 1 Wn~ii~~~r~~v~ik 15 (95)
T cd04446 1 WNSIIDALQTQVEVK 15 (95)
T ss_pred ChHHHHHHHhcCccc
Confidence 788888888888764
No 176
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=24.25 E-value=1.3e+02 Score=22.51 Aligned_cols=19 Identities=16% Similarity=0.296 Sum_probs=17.0
Q ss_pred hhhHHHHHHcCCCeEecCC
Q 047426 6 WSSILESVAAGVPMATWPL 24 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~ 24 (109)
.+..+||..+|+|-|++-+
T Consensus 111 VgAA~Ea~~~GiPsiA~S~ 129 (261)
T PRK13931 111 VGGAMEAALQGLPAIALSQ 129 (261)
T ss_pred HHHHHHHHhcCCCeEEEEe
Confidence 4677999999999999987
No 177
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=24.11 E-value=1.4e+02 Score=22.30 Aligned_cols=23 Identities=26% Similarity=0.190 Sum_probs=18.6
Q ss_pred ccCC-hhhHHHHHHcCCCeEecCC
Q 047426 2 TNYE-WSSILESVAAGVPMATWPL 24 (109)
Q Consensus 2 tHgG-~~s~~Eal~~GvP~i~~P~ 24 (109)
+|.| .+..+||..+|+|-|++-+
T Consensus 105 ~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 105 LYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred cccHhHHHHHHHHhcCCCeEEEEc
Confidence 3444 4677999999999999987
No 178
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=23.90 E-value=2.8e+02 Score=21.04 Aligned_cols=22 Identities=32% Similarity=0.397 Sum_probs=19.0
Q ss_pred ChhhHHHHHHcCCCeEecCCcc
Q 047426 5 EWSSILESVAAGVPMATWPLYE 26 (109)
Q Consensus 5 G~~s~~Eal~~GvP~i~~P~~~ 26 (109)
..+-+-||+..|+|+..+|+-.
T Consensus 238 SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 238 SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred cHHHHHHHHHcCCCEEEecCCC
Confidence 3566889999999999999876
No 179
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=23.68 E-value=2e+02 Score=23.58 Aligned_cols=84 Identities=14% Similarity=0.031 Sum_probs=49.2
Q ss_pred hHHHHHHcCCCeEecCCcc--hhhhHHHH--HHHHhccccc---cCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHh
Q 047426 8 SILESVAAGVPMATWPLYE--EQFLKKKL--VTDALRIGVG---VEKDDITKALAELMVSKSANNMRNKTKGPGKTARKA 80 (109)
Q Consensus 8 s~~Eal~~GvP~i~~P~~~--DQ~~na~~--~~~~~g~g~~---~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a 80 (109)
+=++++++|.+-|..|..+ |-...... .... |.|+. .+++++..++++.+. -|+.....|+.....+
T Consensus 384 ~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~-gtGf~f~~~~~~~l~~al~rA~~-----~y~~~~~~w~~~~~~~ 457 (487)
T COG0297 384 TQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGV-GTGFLFLQTNPDHLANALRRALV-----LYRAPPLLWRKVQPNA 457 (487)
T ss_pred HHHHHHHcCCcceEcccCCccceecCccchhccCc-eeEEEEecCCHHHHHHHHHHHHH-----HhhCCHHHHHHHHHhh
Confidence 3478899999888777643 33222211 2223 66666 688999999987775 2444444455555555
Q ss_pred HHcCCChHHHHHHHHHH
Q 047426 81 VEEGGSSFSDLNALLED 97 (109)
Q Consensus 81 ~~~gGss~~~l~~~v~~ 97 (109)
....-|......++++-
T Consensus 458 m~~d~sw~~sa~~y~~l 474 (487)
T COG0297 458 MGADFSWDLSAKEYVEL 474 (487)
T ss_pred cccccCchhHHHHHHHH
Confidence 44344555555555543
No 180
>cd04447 DEP_BRCC3 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in BBRC3-like proteins. BBRC3, also known as DEPDC1B, is a DEP containing protein of unknown function.
Probab=23.67 E-value=53 Score=20.79 Aligned_cols=14 Identities=36% Similarity=0.930 Sum_probs=11.5
Q ss_pred hhhHHHHHHcCCCe
Q 047426 6 WSSILESVAAGVPM 19 (109)
Q Consensus 6 ~~s~~Eal~~GvP~ 19 (109)
||++.+.+..|+|+
T Consensus 3 Wn~ii~~~r~g~~v 16 (92)
T cd04447 3 WNEVTELFRAGMPL 16 (92)
T ss_pred HHHHHHHHHccCCh
Confidence 78888888888875
No 181
>COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism]
Probab=23.61 E-value=31 Score=26.25 Aligned_cols=18 Identities=22% Similarity=0.732 Sum_probs=13.7
Q ss_pred HHHcCCCeEecCCcchhhh
Q 047426 12 SVAAGVPMATWPLYEEQFL 30 (109)
Q Consensus 12 al~~GvP~i~~P~~~DQ~~ 30 (109)
||.-||| ||||.|+-+..
T Consensus 70 aIRGGIP-ICwPWFG~~~~ 87 (287)
T COG0676 70 AIRGGIP-ICWPWFGPLAQ 87 (287)
T ss_pred cccCCCc-EEEeccCccCC
Confidence 5777888 58999986554
No 182
>COG1422 Predicted membrane protein [Function unknown]
Probab=22.78 E-value=2e+02 Score=20.83 Aligned_cols=70 Identities=20% Similarity=0.191 Sum_probs=40.4
Q ss_pred hhHHHHHHcCCCeEecCCcchhhhH-HHHHHHHhccccccCHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHhHHc
Q 047426 7 SSILESVAAGVPMATWPLYEEQFLK-KKLVTDALRIGVGVEKDDITKALAELMVS-KSANNMRNKTKGPGKTARKAVEE 83 (109)
Q Consensus 7 ~s~~Eal~~GvP~i~~P~~~DQ~~n-a~~~~~~~g~g~~~~~~~i~~ai~~vl~~-~~~~~~r~~a~~l~~~~~~a~~~ 83 (109)
.|..+++..++-.+..|+..-++.- .-.+... -..-+..-+.+.+.| ++=+++++.++++++++++|-+.
T Consensus 23 ~~~~~~i~~~ln~~f~P~i~~~~p~lvilV~av-------i~gl~~~i~~~~liD~ekm~~~qk~m~efq~e~~eA~~~ 94 (201)
T COG1422 23 SSIRDGIGGALNVVFGPLLSPLPPHLVILVAAV-------ITGLYITILQKLLIDQEKMKELQKMMKEFQKEFREAQES 94 (201)
T ss_pred HHHHHHHHHHHHHHHhhhccccccHHHHHHHHH-------HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4667777777777777766543332 2222211 112233444555443 22346999999999999988543
No 183
>PF04604 L_biotic_typeA: Type-A lantibiotic; InterPro: IPR007682 Lantibiotics are antibiotic peptides distinguished by the presence of the rare thioether amino acids lanthionine and/or methyllanthionine. They are produced by Gram-positive bacteria as gene-encoded precursor peptides and undergo post-translational modification to generate the mature peptide. Based on their structural and functional features lantibiotics are currently divided into two major groups: the flexible amphiphilic type-A and the rather rigid and globular type-B. Type-A lantibiotics act primarily by pore formation in the bacterial membrane by a mechanism involving the interaction with specific docking molecules such as the membrane precursor lipid II [].; GO: 0019748 secondary metabolic process, 0005576 extracellular region
Probab=22.76 E-value=17 Score=20.58 Aligned_cols=20 Identities=10% Similarity=0.373 Sum_probs=16.4
Q ss_pred CC-hhhHHHHHHcCCCeEecC
Q 047426 4 YE-WSSILESVAAGVPMATWP 23 (109)
Q Consensus 4 gG-~~s~~Eal~~GvP~i~~P 23 (109)
|| ++++..+|.+..|+..|-
T Consensus 25 Gg~g~Gv~~Tis~eC~~ns~q 45 (51)
T PF04604_consen 25 GGAGNGVIKTISHECRMNSWQ 45 (51)
T ss_pred CCCCCCceeecccccccccHH
Confidence 45 888999999999987773
No 184
>TIGR02302 aProt_lowcomp conserved hypothetical protein TIGR02302. Members of this family are long (~850 residue) bacterial proteins from the alpha Proteobacteria. Each has 2-3 predicted transmembrane helices near the N-terminus and a long C-terminal region that includes stretches of Gln/Gly-rich low complexity sequence, predicted by TMHMM to be outside the membrane. In Bradyrhizobium japonicum, two tandem reading frames are together homologous the single members found in other species; the cutoffs scores are set low enough that the longer scores above the trusted cutoff and the shorter above the noise cutoff for this model.
Probab=22.46 E-value=5.5e+02 Score=22.77 Aligned_cols=36 Identities=17% Similarity=0.330 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhc
Q 047426 65 NMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLISI 101 (109)
Q Consensus 65 ~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~ 101 (109)
...++.+.-++.+.+|.+ .|.|...|++++++++..
T Consensus 500 ~A~~~Lr~AQ~aL~eAL~-~gAsdeEI~~Lm~eLR~A 535 (851)
T TIGR02302 500 DAERRLRAAQDALKDALE-RGASDEEIKQLTDKLRAA 535 (851)
T ss_pred HHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHH
Confidence 456666677777777764 678888999999988653
No 185
>PF13779 DUF4175: Domain of unknown function (DUF4175)
Probab=22.43 E-value=4.8e+02 Score=22.94 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhc
Q 047426 66 MRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLISI 101 (109)
Q Consensus 66 ~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~ 101 (109)
..++.+.-++.++++.+ .|.|...|++++++++..
T Consensus 470 A~~~Lr~AQe~L~eAL~-~gAs~eEI~rLm~eLR~A 504 (820)
T PF13779_consen 470 AERRLRAAQEALREALE-RGASDEEIARLMQELREA 504 (820)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHH
Confidence 44555666666777764 578889999999998754
No 186
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=22.37 E-value=2.6e+02 Score=19.05 Aligned_cols=49 Identities=24% Similarity=0.381 Sum_probs=31.4
Q ss_pred hHHHHHHcCCCeEecCCcchhhhHHHHHHHHhccccc--c-CHHHHHHHHHHhhccc
Q 047426 8 SILESVAAGVPMATWPLYEEQFLKKKLVTDALRIGVG--V-EKDDITKALAELMVSK 61 (109)
Q Consensus 8 s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--~-~~~~i~~ai~~vl~~~ 61 (109)
.+.|++++|+|+|+.+.- .....+.+. +.|.. . ..+++..++..++.+.
T Consensus 292 ~~~Ea~a~g~pvi~~~~~----~~~e~~~~~-~~g~~~~~~~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 292 VLLEAMAAGTPVIASDVG----GIPEVVEDG-ETGLLVPPGDVEELADALEQLLEDP 343 (381)
T ss_pred HHHHHHhcCCcEEECCCC----ChHHHhcCC-CceEecCCCCHHHHHHHHHHHhcCH
Confidence 369999999999888653 122222211 12332 2 4689999999888764
No 187
>TIGR00594 polc DNA-directed DNA polymerase III (polc). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=22.19 E-value=4.2e+02 Score=23.82 Aligned_cols=45 Identities=13% Similarity=0.068 Sum_probs=29.2
Q ss_pred HHHHHhhcccchHHHHHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHHh
Q 047426 52 KALAELMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLIS 100 (109)
Q Consensus 52 ~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~ 100 (109)
+.+++.|... -++...++++.+.+.....|-+....+++.+.|..
T Consensus 698 D~LRram~KK----~~~~m~~~r~~Fi~ga~~~G~~~~~a~~i~~~i~~ 742 (1022)
T TIGR00594 698 DLLRRAMGKK----KAEEMAKEREKFVEGAEKNGYDPEIAENLFDLIEK 742 (1022)
T ss_pred HHHHHHhcCC----cHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 3455555533 23456667777776666778888888887777755
No 188
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=21.72 E-value=1.9e+02 Score=21.79 Aligned_cols=46 Identities=20% Similarity=0.242 Sum_probs=29.9
Q ss_pred ccCChhhHHHHHHc----CCCeEecCCcchhhhHHHHHHHHhccccc--cCHHHHHHHHHHhhccc
Q 047426 2 TNYEWSSILESVAA----GVPMATWPLYEEQFLKKKLVTDALRIGVG--VEKDDITKALAELMVSK 61 (109)
Q Consensus 2 tHgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~~~~~~g~g~~--~~~~~i~~ai~~vl~~~ 61 (109)
+-||=+++++++.. ++|++++-.. .+|.- ++.+++.+++.+++.++
T Consensus 69 ~~GGDGt~l~~~~~~~~~~~pilGIn~G--------------~lGFL~~~~~~~~~~~l~~~~~g~ 120 (291)
T PRK02155 69 VLGGDGTMLGIGRQLAPYGVPLIGINHG--------------RLGFITDIPLDDMQETLPPMLAGN 120 (291)
T ss_pred EECCcHHHHHHHHHhcCCCCCEEEEcCC--------------CccccccCCHHHHHHHHHHHHcCC
Confidence 45777777777652 5676666421 12322 67888999999988764
No 189
>PF15079 DUF4546: Domain of unknown function (DUF4546)
Probab=21.65 E-value=3.1e+02 Score=19.54 Aligned_cols=46 Identities=13% Similarity=0.235 Sum_probs=25.1
Q ss_pred HHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhcc
Q 047426 48 DDITKALAELMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLISIC 102 (109)
Q Consensus 48 ~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~~ 102 (109)
.+++.-+++|-+ +++++..+++.+-.- ---.+.-|.+||+.+..+.
T Consensus 50 ~eLkNeLREVRE-----ELkEKmeEIKQIKdi----MDKDFDKL~EFVEIMKeMQ 95 (205)
T PF15079_consen 50 QELKNELREVRE-----ELKEKMEEIKQIKDI----MDKDFDKLHEFVEIMKEMQ 95 (205)
T ss_pred HHHHHHHHHHHH-----HHHHHHHHHHHHHHH----HhhhHHHHHHHHHHHHHHH
Confidence 355666666653 356666665554211 1234556777777666553
No 190
>PF07319 DnaI_N: Primosomal protein DnaI N-terminus; InterPro: IPR009928 This entry represents the N terminus (approximately 120 residues) of bacterial primosomal DnaI proteins, although one family member appears to be of viral origin. DnaI is one of the components of the Bacillus subtilis replication restart primosome, and is required for the DnaB75-dependent loading of the DnaC helicase [].; PDB: 2K7R_A.
Probab=21.64 E-value=95 Score=19.22 Aligned_cols=13 Identities=8% Similarity=0.151 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHH
Q 047426 65 NMRNKTKGPGKTA 77 (109)
Q Consensus 65 ~~r~~a~~l~~~~ 77 (109)
.++++..++.+.+
T Consensus 16 ~~~~~~~~l~~~v 28 (94)
T PF07319_consen 16 NFEERYEQLKQEV 28 (94)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 3444555444443
No 191
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=21.54 E-value=3.9e+02 Score=20.64 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=29.0
Q ss_pred ChhhHHHHHHcCCCeEec-CCcchhhhHHHHHHHHhccccc-cCHHHHHHHHHHhh
Q 047426 5 EWSSILESVAAGVPMATW-PLYEEQFLKKKLVTDALRIGVG-VEKDDITKALAELM 58 (109)
Q Consensus 5 G~~s~~Eal~~GvP~i~~-P~~~DQ~~na~~~~~~~g~g~~-~~~~~i~~ai~~vl 58 (109)
|.--..||...|+|.|.+ | ++-...-+.+.+. |.=.+ -+.+++...+.+..
T Consensus 256 ggTMa~EAA~LGtPaIs~~~--g~~~~vd~~L~~~-Gll~~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 256 GGTMAREAALLGTPAISCFP--GKLLAVDKYLIEK-GLLYHSTDPDEIVEYVRKNL 308 (335)
T ss_pred CcHHHHHHHHhCCCEEEecC--CcchhHHHHHHHC-CCeEecCCHHHHHHHHHHhh
Confidence 445568999999999984 3 1211222344445 65322 56666666554433
No 192
>PRK07279 dnaE DNA polymerase III DnaE; Reviewed
Probab=21.49 E-value=5e+02 Score=23.56 Aligned_cols=71 Identities=18% Similarity=0.170 Sum_probs=40.4
Q ss_pred EecCCcchhhhHHHHHHHHhccccccCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHH
Q 047426 20 ATWPLYEEQFLKKKLVTDALRIGVGVEKDDITKALAELMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLI 99 (109)
Q Consensus 20 i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~ 99 (109)
.+++++.+|.+...+.. .| ++..+ .+.+++.|...+ .+...++++.+.+.....|-+.....++-+.|.
T Consensus 605 yGvivYQEQVMqia~~~----ag--fslge-AD~lRrAm~KK~----~~~m~~~~~~F~~ga~~~g~~~~~a~~if~~i~ 673 (1034)
T PRK07279 605 YGIMLYQEQVMQIAQVF----AG--FSLGK-ADLLRRAMSKKN----ASEMQKMEEDFLQGALELGHSEEKARELFDRME 673 (1034)
T ss_pred cCchhhHHHHHHHHHHH----cC--CCHHH-HHHHHHHhCCCC----HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 34455556655544332 22 33333 445666666432 334566677777665667888777777777776
Q ss_pred hc
Q 047426 100 SI 101 (109)
Q Consensus 100 ~~ 101 (109)
..
T Consensus 674 ~F 675 (1034)
T PRK07279 674 KF 675 (1034)
T ss_pred HH
Confidence 53
No 193
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=21.35 E-value=78 Score=21.93 Aligned_cols=18 Identities=33% Similarity=0.481 Sum_probs=13.6
Q ss_pred Chhh-HHHHHHcCCCeEec
Q 047426 5 EWSS-ILESVAAGVPMATW 22 (109)
Q Consensus 5 G~~s-~~Eal~~GvP~i~~ 22 (109)
|+.. +.+++..|+|+|+-
T Consensus 111 Glr~~i~~A~~~giPVLt~ 129 (159)
T PF10649_consen 111 GLRDEIAAALAAGIPVLTA 129 (159)
T ss_pred CHHHHHHHHHHCCCCEEEE
Confidence 4433 46799999999976
No 194
>PHA00490 terminal protein
Probab=21.27 E-value=3.5e+02 Score=19.98 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhHHcCCChHHHHHHHHHHHHhcccc
Q 047426 65 NMRNKTKGPGKTARKAVEEGGSSFSDLNALLEDLISICSR 104 (109)
Q Consensus 65 ~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~l~~~~~~ 104 (109)
-|-++.+.|+.-+.+.++..-.|+-..+++|+.|+..++.
T Consensus 174 YYe~~m~qlq~NFI~sVEgsFNS~~~aDelve~LkkiPpD 213 (266)
T PHA00490 174 YYEESMRQLQDNFIRSVEGSFNSYWEADELVEKLKKIPPD 213 (266)
T ss_pred HHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHhcCCch
Confidence 4888999999999988876667877899999999988764
No 195
>PRK00708 sec-independent translocase; Provisional
Probab=20.82 E-value=2.4e+02 Score=20.51 Aligned_cols=35 Identities=17% Similarity=0.150 Sum_probs=16.0
Q ss_pred cCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhH
Q 047426 45 VEKDDITKALAELMVSKSANNMRNKTKGPGKTARKAV 81 (109)
Q Consensus 45 ~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~ 81 (109)
+.+++|-..++.+-.-- ..+|+-+..++..+.+..
T Consensus 20 ~GPkrLP~~~R~lGk~v--~k~R~~a~e~r~~~~e~~ 54 (209)
T PRK00708 20 VGPKDLPPMLRAFGKMT--ARMRKMAGEFRRQFDEAL 54 (209)
T ss_pred cCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHh
Confidence 55555544444432210 135555555555554443
No 196
>TIGR03147 cyt_nit_nrfF cytochrome c nitrite reductase, accessory protein NrfF.
Probab=20.80 E-value=2.3e+02 Score=18.91 Aligned_cols=29 Identities=14% Similarity=0.060 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHhHHcCCChHHHHHHHHH
Q 047426 68 NKTKGPGKTARKAVEEGGSSFSDLNALLE 96 (109)
Q Consensus 68 ~~a~~l~~~~~~a~~~gGss~~~l~~~v~ 96 (109)
.-|+.+|..+++.+.+|-|...-++-|++
T Consensus 57 ~iA~dmR~~Vr~~i~~G~Sd~eI~~~~v~ 85 (126)
T TIGR03147 57 PIAYDLRHEVYSMVNEGKSNQQIIDFMTA 85 (126)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 45677888888887766665544444444
No 197
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=20.64 E-value=4.3e+02 Score=20.81 Aligned_cols=37 Identities=11% Similarity=0.112 Sum_probs=22.4
Q ss_pred HHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHHcCC
Q 047426 49 DITKALAELMVSKSANNMRNKTKGPGKTARKAVEEGG 85 (109)
Q Consensus 49 ~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gG 85 (109)
+|-.-++.+.-..++.+|.+...+|++.+++.+++-.
T Consensus 286 ~i~~ff~~~~l~~~a~t~~~cy~ela~~vk~~l~~~d 322 (346)
T PLN03180 286 EIIPFFQSVRLPKEAVTVEDCYIELAKQVKEKLGKVD 322 (346)
T ss_pred HHHHHHHhccCCcccCcHHHHHHHHHHHHHhhccccC
Confidence 4444454444223445788888888888887654333
No 198
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=20.60 E-value=99 Score=23.17 Aligned_cols=24 Identities=21% Similarity=0.390 Sum_probs=22.1
Q ss_pred cCChhhHHHHHHcCCCeEecCCcc
Q 047426 3 NYEWSSILESVAAGVPMATWPLYE 26 (109)
Q Consensus 3 HgG~~s~~Eal~~GvP~i~~P~~~ 26 (109)
||||-.+.-+++.|..++.+|-..
T Consensus 172 ~~G~LAl~~ala~~a~~ilipE~~ 195 (282)
T PF00365_consen 172 NAGWLALAAALATGADLILIPEEP 195 (282)
T ss_dssp TSTHHHHHHHHHHTSSEEEBTTSH
T ss_pred CcCHHHHHHHhccCCCEEEEeccc
Confidence 899999999999999999999654
No 199
>PRK10144 formate-dependent nitrite reductase complex subunit NrfF; Provisional
Probab=20.42 E-value=2.3e+02 Score=18.88 Aligned_cols=29 Identities=17% Similarity=0.091 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhHHcCCChHHHHHHHHH
Q 047426 68 NKTKGPGKTARKAVEEGGSSFSDLNALLE 96 (109)
Q Consensus 68 ~~a~~l~~~~~~a~~~gGss~~~l~~~v~ 96 (109)
.-|+.++..+++.+.+|-|...-++-|++
T Consensus 57 ~iA~dmR~~Vr~~i~~G~sd~eI~~~~v~ 85 (126)
T PRK10144 57 PVAVSMRHQVYSMVAEGKSEVEIIGWMTE 85 (126)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 45777888888888776666555555554
No 200
>COG0587 DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]
Probab=20.32 E-value=3.2e+02 Score=25.00 Aligned_cols=73 Identities=11% Similarity=0.096 Sum_probs=47.2
Q ss_pred CeEecCCcchhhhHHHHHHHHhccccccCHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHhHHcCCChHHHHHHHHHH
Q 047426 18 PMATWPLYEEQFLKKKLVTDALRIGVGVEKDDITKALAELMVSKSANNMRNKTKGPGKTARKAVEEGGSSFSDLNALLED 97 (109)
Q Consensus 18 P~i~~P~~~DQ~~na~~~~~~~g~g~~~~~~~i~~ai~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~ 97 (109)
|..++|++.+|.+.-.+.. .|..+... +.+|+.|.- +-.+...+.++.+.+.....|.+.....++.+.
T Consensus 669 ~TYGVivYQEQVMqIAq~~----agfSlgeA---D~LRRAMgK----K~~~~m~~~r~~F~~Ga~~~G~~~~~a~~ifd~ 737 (1139)
T COG0587 669 ETYGVIVYQEQVMQIAQVL----AGFSLGEA---DLLRRAMGK----KKAEEMEKQREKFIEGAVKNGYDKEFAEKIFDL 737 (1139)
T ss_pred cccCceeeHHHHHHHHHHH----cCCCchhH---HHHHHHHcc----CCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 5678888999988766553 23332222 234555552 345566777778777666778888888888777
Q ss_pred HHhc
Q 047426 98 LISI 101 (109)
Q Consensus 98 l~~~ 101 (109)
|...
T Consensus 738 i~kF 741 (1139)
T COG0587 738 IEKF 741 (1139)
T ss_pred HHHH
Confidence 7654
No 201
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=20.28 E-value=1.4e+02 Score=22.31 Aligned_cols=20 Identities=20% Similarity=0.348 Sum_probs=17.7
Q ss_pred hhhHHHHHHcCCCeEecCCc
Q 047426 6 WSSILESVAAGVPMATWPLY 25 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~ 25 (109)
-+..+||..+|+|-|++-+.
T Consensus 107 VaaA~Ea~~~GipsIA~S~~ 126 (252)
T COG0496 107 VAAAMEAALLGIPAIAISLA 126 (252)
T ss_pred HHHHHHHHHcCccceeeeeh
Confidence 46779999999999999986
No 202
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=20.01 E-value=1.6e+02 Score=21.75 Aligned_cols=20 Identities=25% Similarity=0.363 Sum_probs=17.2
Q ss_pred hhhHHHHHHcCCCeEecCCc
Q 047426 6 WSSILESVAAGVPMATWPLY 25 (109)
Q Consensus 6 ~~s~~Eal~~GvP~i~~P~~ 25 (109)
.+..+||..+|+|-|++-+.
T Consensus 110 VgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 110 VGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred HHHHHHHHHcCCCeEEEEec
Confidence 46779999999999999873
Done!