Query 047433
Match_columns 614
No_of_seqs 394 out of 2072
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 19:25:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047433.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047433hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.8 3.9E-18 1.3E-22 152.1 16.4 106 420-533 10-115 (126)
2 3rkv_A Putative peptidylprolyl 99.7 2E-17 7E-22 150.4 11.4 111 418-531 6-129 (162)
3 2hr2_A Hypothetical protein; a 99.7 6.1E-17 2.1E-21 154.0 14.8 111 420-533 8-136 (159)
4 4gcn_A Protein STI-1; structur 99.7 1.4E-16 4.7E-21 141.7 14.0 105 421-530 6-114 (127)
5 3upv_A Heat shock protein STI1 99.6 1.4E-15 4.7E-20 132.0 13.4 101 422-530 3-103 (126)
6 1w3b_A UDP-N-acetylglucosamine 99.6 5.2E-15 1.8E-19 151.1 19.1 289 291-604 77-373 (388)
7 1w3b_A UDP-N-acetylglucosamine 99.6 1.3E-14 4.5E-19 148.0 18.5 286 291-603 43-338 (388)
8 3gyz_A Chaperone protein IPGC; 99.6 1.4E-14 4.9E-19 134.5 16.4 104 420-531 33-136 (151)
9 3sz7_A HSC70 cochaperone (SGT) 99.6 2.2E-14 7.5E-19 130.6 17.1 108 421-536 9-116 (164)
10 2pl2_A Hypothetical conserved 99.6 1.3E-14 4.4E-19 139.4 11.6 169 423-603 5-184 (217)
11 3vtx_A MAMA; tetratricopeptide 99.6 3.3E-14 1.1E-18 130.3 13.3 171 422-603 4-174 (184)
12 2xcb_A PCRH, regulatory protei 99.5 1E-13 3.4E-18 124.0 15.7 104 422-533 17-120 (142)
13 3urz_A Uncharacterized protein 99.5 2.4E-14 8.3E-19 136.6 11.7 169 423-603 4-190 (208)
14 2vgx_A Chaperone SYCD; alterna 99.5 1.1E-13 3.7E-18 126.3 15.5 104 422-533 20-123 (148)
15 4i17_A Hypothetical protein; T 99.5 4E-14 1.4E-18 134.4 12.5 101 424-532 8-109 (228)
16 1kt0_A FKBP51, 51 kDa FK506-bi 99.5 1.3E-13 4.3E-18 148.6 17.1 113 420-535 265-387 (457)
17 4gyw_A UDP-N-acetylglucosamine 99.5 3.3E-14 1.1E-18 163.0 13.3 169 422-601 8-176 (723)
18 3uq3_A Heat shock protein STI1 99.5 5.1E-12 1.7E-16 119.1 26.0 210 290-529 14-237 (258)
19 2fbn_A 70 kDa peptidylprolyl i 99.5 2.9E-13 1E-17 126.8 17.2 112 418-532 33-155 (198)
20 1p5q_A FKBP52, FK506-binding p 99.5 3E-13 1E-17 139.5 18.6 111 420-533 144-264 (336)
21 3vtx_A MAMA; tetratricopeptide 99.5 4.3E-13 1.5E-17 122.8 17.2 101 422-530 72-172 (184)
22 2if4_A ATFKBP42; FKBP-like, al 99.5 2.6E-14 9E-19 147.8 9.9 144 419-567 175-330 (338)
23 3q49_B STIP1 homology and U bo 99.5 3.9E-13 1.3E-17 116.7 15.7 102 422-531 8-109 (137)
24 4eqf_A PEX5-related protein; a 99.5 9.6E-13 3.3E-17 132.8 20.3 228 290-534 74-316 (365)
25 3ieg_A DNAJ homolog subfamily 99.5 3.3E-12 1.1E-16 125.7 23.1 196 292-531 14-220 (359)
26 4ga2_A E3 SUMO-protein ligase 99.5 1.7E-13 5.9E-18 124.8 12.5 103 422-532 30-133 (150)
27 2h6f_A Protein farnesyltransfe 99.5 7.7E-14 2.6E-18 148.1 11.5 141 382-533 93-234 (382)
28 1fch_A Peroxisomal targeting s 99.5 2.9E-12 9.9E-17 128.2 21.8 226 286-534 69-320 (368)
29 2pl2_A Hypothetical conserved 99.5 8.8E-13 3E-17 126.5 17.2 198 289-527 13-213 (217)
30 1a17_A Serine/threonine protei 99.5 3E-12 1E-16 113.5 18.6 106 420-533 10-115 (166)
31 1ihg_A Cyclophilin 40; ppiase 99.5 4.8E-13 1.6E-17 140.9 15.4 105 419-531 219-339 (370)
32 2y4t_A DNAJ homolog subfamily 99.5 7E-12 2.4E-16 129.3 23.3 198 290-531 35-243 (450)
33 1hxi_A PEX5, peroxisome target 99.5 4.5E-13 1.5E-17 118.2 12.3 100 425-532 19-118 (121)
34 2c2l_A CHIP, carboxy terminus 99.5 1.7E-13 5.8E-18 137.5 10.7 102 423-532 4-105 (281)
35 3ieg_A DNAJ homolog subfamily 99.4 4E-12 1.4E-16 125.1 19.9 278 286-603 42-339 (359)
36 1elw_A TPR1-domain of HOP; HOP 99.4 1.9E-12 6.4E-17 107.5 14.5 102 422-531 3-104 (118)
37 2h6f_A Protein farnesyltransfe 99.4 1.4E-13 4.8E-18 146.1 8.5 149 374-533 118-274 (382)
38 3hym_B Cell division cycle pro 99.4 2.1E-11 7.3E-16 119.1 23.1 250 297-566 40-300 (330)
39 4gyw_A UDP-N-acetylglucosamine 99.4 6.3E-13 2.2E-17 152.4 13.5 107 420-534 40-146 (723)
40 2y4t_A DNAJ homolog subfamily 99.4 3.5E-12 1.2E-16 131.5 17.5 207 287-531 66-289 (450)
41 3hym_B Cell division cycle pro 99.4 6E-12 2.1E-16 123.0 17.6 225 290-531 65-302 (330)
42 3cv0_A Peroxisome targeting si 99.4 2.9E-11 9.8E-16 118.0 21.8 222 289-533 29-274 (327)
43 2lni_A Stress-induced-phosphop 99.4 3E-12 1E-16 109.1 12.9 102 422-531 15-116 (133)
44 2vyi_A SGTA protein; chaperone 99.4 9.9E-12 3.4E-16 104.7 15.9 104 420-531 9-112 (131)
45 3fp2_A TPR repeat-containing p 99.4 1.9E-11 6.4E-16 128.7 21.5 176 419-606 239-414 (537)
46 1elr_A TPR2A-domain of HOP; HO 99.4 1E-11 3.5E-16 104.9 14.8 101 422-530 3-110 (131)
47 2dba_A Smooth muscle cell asso 99.4 7.2E-12 2.5E-16 109.0 13.8 106 422-532 27-132 (148)
48 2xev_A YBGF; tetratricopeptide 99.4 5.6E-12 1.9E-16 108.3 12.9 103 425-532 4-109 (129)
49 2l6j_A TPR repeat-containing p 99.4 5.7E-13 2E-17 111.3 5.7 95 422-524 3-103 (111)
50 3qky_A Outer membrane assembly 99.3 1.1E-11 3.8E-16 120.5 15.0 112 422-535 14-133 (261)
51 2q7f_A YRRB protein; TPR, prot 99.3 3.3E-11 1.1E-15 113.1 17.5 196 288-533 30-227 (243)
52 1wao_1 Serine/threonine protei 99.3 8.9E-12 3E-16 135.3 15.1 105 422-534 5-109 (477)
53 3fp2_A TPR repeat-containing p 99.3 1.3E-11 4.3E-16 130.1 15.7 262 297-604 220-496 (537)
54 1xnf_A Lipoprotein NLPI; TPR, 99.3 2.2E-11 7.4E-16 116.5 15.8 104 422-533 42-145 (275)
55 1fch_A Peroxisomal targeting s 99.3 2.1E-11 7.2E-16 121.9 15.8 170 424-603 65-250 (368)
56 4ga2_A E3 SUMO-protein ligase 99.3 7.1E-13 2.4E-17 120.7 4.3 97 429-533 3-99 (150)
57 1hh8_A P67PHOX, NCF-2, neutrop 99.3 7E-11 2.4E-15 110.0 17.6 100 423-530 37-152 (213)
58 3urz_A Uncharacterized protein 99.3 2.2E-11 7.4E-16 116.1 14.4 79 427-513 58-136 (208)
59 3uq3_A Heat shock protein STI1 99.3 1.1E-11 3.6E-16 116.9 12.1 175 423-603 38-240 (258)
60 3u4t_A TPR repeat-containing p 99.3 1.6E-11 5.4E-16 117.9 13.1 96 425-529 110-209 (272)
61 4eqf_A PEX5-related protein; a 99.3 7E-11 2.4E-15 119.1 18.3 227 320-566 67-311 (365)
62 2gw1_A Mitochondrial precursor 99.3 1.2E-11 4.2E-16 128.8 13.0 57 287-348 45-103 (514)
63 2vq2_A PILW, putative fimbrial 99.3 2.5E-11 8.5E-16 112.0 13.6 102 422-531 41-145 (225)
64 3as5_A MAMA; tetratricopeptide 99.3 1.6E-11 5.4E-16 109.4 11.8 171 423-604 8-178 (186)
65 1hh8_A P67PHOX, NCF-2, neutrop 99.3 4E-11 1.4E-15 111.7 15.0 101 422-533 5-105 (213)
66 2xpi_A Anaphase-promoting comp 99.3 6.3E-11 2.1E-15 127.0 18.5 173 423-604 407-584 (597)
67 4i17_A Hypothetical protein; T 99.3 3.9E-11 1.4E-15 113.7 14.8 100 424-531 43-149 (228)
68 2ho1_A Type 4 fimbrial biogene 99.3 4.4E-10 1.5E-14 106.8 21.8 194 290-531 46-241 (252)
69 2q7f_A YRRB protein; TPR, prot 99.3 4.5E-11 1.5E-15 112.2 14.7 170 423-603 57-226 (243)
70 1na0_A Designed protein CTPR3; 99.3 1.1E-10 3.6E-15 97.5 15.4 101 423-531 9-109 (125)
71 2gw1_A Mitochondrial precursor 99.3 1.5E-10 5E-15 120.6 19.8 173 420-604 234-406 (514)
72 2kck_A TPR repeat; tetratricop 99.3 3.4E-11 1.2E-15 99.2 11.9 102 425-532 8-110 (112)
73 4abn_A Tetratricopeptide repea 99.3 1.3E-11 4.3E-16 133.2 11.7 171 422-604 101-292 (474)
74 4abn_A Tetratricopeptide repea 99.3 1E-10 3.5E-15 126.1 18.7 169 319-533 103-292 (474)
75 2yhc_A BAMD, UPF0169 lipoprote 99.2 5E-11 1.7E-15 114.5 13.5 179 423-603 4-217 (225)
76 3k9i_A BH0479 protein; putativ 99.2 6E-12 2E-16 108.8 6.3 90 435-532 2-94 (117)
77 2e2e_A Formate-dependent nitri 99.2 1.1E-10 3.9E-15 106.5 15.0 105 422-534 43-150 (177)
78 3u4t_A TPR repeat-containing p 99.2 4.7E-11 1.6E-15 114.6 12.6 100 426-530 40-139 (272)
79 1zu2_A Mitochondrial import re 99.2 1.2E-11 3.9E-16 117.6 7.8 90 435-532 14-124 (158)
80 2pzi_A Probable serine/threoni 99.2 6.5E-11 2.2E-15 133.7 15.1 101 423-532 467-567 (681)
81 2xpi_A Anaphase-promoting comp 99.2 6E-10 2E-14 119.4 21.6 104 424-530 476-581 (597)
82 2vq2_A PILW, putative fimbrial 99.2 1.4E-10 4.8E-15 106.9 14.0 101 422-530 75-178 (225)
83 3cv0_A Peroxisome targeting si 99.2 1.9E-10 6.6E-15 112.2 15.2 103 424-534 22-124 (327)
84 2ho1_A Type 4 fimbrial biogene 99.2 2.1E-10 7.2E-15 109.1 14.8 98 425-530 73-172 (252)
85 3as5_A MAMA; tetratricopeptide 99.2 5E-10 1.7E-14 99.5 16.3 101 424-532 77-177 (186)
86 3qky_A Outer membrane assembly 99.2 5.4E-10 1.8E-14 108.5 17.5 110 423-534 52-183 (261)
87 4gco_A Protein STI-1; structur 99.2 6.8E-11 2.3E-15 105.0 9.3 109 448-567 4-112 (126)
88 2vsy_A XCC0866; transferase, g 99.2 2.6E-10 9E-15 124.2 15.8 99 424-530 24-122 (568)
89 2fo7_A Synthetic consensus TPR 99.2 6.4E-10 2.2E-14 93.2 14.7 99 425-531 3-101 (136)
90 2pzi_A Probable serine/threoni 99.2 4.3E-11 1.5E-15 135.2 9.6 136 422-569 432-567 (681)
91 2kat_A Uncharacterized protein 99.2 2E-10 7E-15 98.1 11.5 88 440-535 2-89 (115)
92 4g1t_A Interferon-induced prot 99.2 3.6E-10 1.2E-14 117.7 15.4 213 297-534 231-465 (472)
93 3mkr_A Coatomer subunit epsilo 99.1 1.9E-09 6.6E-14 108.8 20.0 91 434-532 177-268 (291)
94 3sf4_A G-protein-signaling mod 99.1 3E-09 1E-13 106.9 21.3 114 421-534 185-302 (406)
95 4g1t_A Interferon-induced prot 99.1 3.3E-09 1.1E-13 110.4 21.9 302 289-603 59-405 (472)
96 2fo7_A Synthetic consensus TPR 99.1 9.7E-10 3.3E-14 92.1 14.0 101 423-531 35-135 (136)
97 1qqe_A Vesicular transport pro 99.1 1.6E-09 5.5E-14 108.4 18.1 113 422-534 116-234 (292)
98 3gyz_A Chaperone protein IPGC; 99.1 6.2E-11 2.1E-15 109.9 7.0 114 444-568 23-136 (151)
99 2r5s_A Uncharacterized protein 99.1 2.1E-10 7E-15 105.8 10.3 109 419-536 36-145 (176)
100 3qou_A Protein YBBN; thioredox 99.1 5.3E-10 1.8E-14 112.2 13.9 105 424-536 118-256 (287)
101 1p5q_A FKBP52, FK506-binding p 99.1 9.1E-10 3.1E-14 113.5 15.6 163 297-528 131-294 (336)
102 2vsy_A XCC0866; transferase, g 99.1 1.6E-10 5.4E-15 125.9 10.2 159 436-605 2-163 (568)
103 3nf1_A KLC 1, kinesin light ch 99.1 6.6E-09 2.3E-13 100.5 19.8 213 290-531 36-310 (311)
104 3ro2_A PINS homolog, G-protein 99.1 9.4E-09 3.2E-13 99.3 19.5 114 421-534 181-298 (338)
105 2kc7_A BFR218_protein; tetratr 99.1 2.8E-10 9.5E-15 94.3 7.3 92 427-534 4-96 (99)
106 1na3_A Designed protein CTPR2; 99.0 2.4E-09 8.3E-14 86.1 12.6 84 422-513 8-91 (91)
107 2vgx_A Chaperone SYCD; alterna 99.0 2.3E-10 7.9E-15 104.2 7.3 115 443-568 7-121 (148)
108 4a1s_A PINS, partner of inscut 99.0 7.5E-09 2.6E-13 105.5 19.3 114 421-534 221-338 (411)
109 2e2e_A Formate-dependent nitri 99.0 3E-10 1E-14 103.6 7.7 129 429-568 16-147 (177)
110 2yhc_A BAMD, UPF0169 lipoprote 99.0 2.3E-09 7.8E-14 102.8 13.7 106 423-533 41-181 (225)
111 3ulq_A Response regulator aspa 99.0 1.8E-09 6.2E-14 110.7 12.1 111 422-535 183-300 (383)
112 1qqe_A Vesicular transport pro 99.0 2.9E-09 9.9E-14 106.5 13.3 146 422-568 76-231 (292)
113 3edt_B KLC 2, kinesin light ch 99.0 2.1E-08 7.2E-13 95.0 18.4 206 297-528 19-281 (283)
114 2ond_A Cleavage stimulation fa 99.0 1.9E-08 6.6E-13 100.9 18.9 88 436-531 182-273 (308)
115 1xnf_A Lipoprotein NLPI; TPR, 99.0 1.8E-09 6.2E-14 103.1 10.8 128 434-568 16-143 (275)
116 3ro2_A PINS homolog, G-protein 99.0 2.1E-08 7.2E-13 96.8 17.7 110 422-531 222-335 (338)
117 3sf4_A G-protein-signaling mod 99.0 2.6E-08 9E-13 100.0 18.8 113 422-534 226-342 (406)
118 1a17_A Serine/threonine protei 99.0 7.7E-09 2.6E-13 91.4 13.2 99 423-529 47-147 (166)
119 3ro3_A PINS homolog, G-protein 98.9 6.9E-09 2.3E-13 89.7 12.4 113 422-534 8-124 (164)
120 1kt0_A FKBP51, 51 kDa FK506-bi 98.9 5.9E-09 2E-13 112.2 14.3 162 297-527 252-414 (457)
121 2ond_A Cleavage stimulation fa 98.9 3.4E-09 1.2E-13 106.4 11.5 225 370-607 33-278 (308)
122 3ma5_A Tetratricopeptide repea 98.9 2.5E-09 8.6E-14 90.6 8.7 76 452-535 2-77 (100)
123 2xcb_A PCRH, regulatory protei 98.9 1.3E-09 4.3E-14 97.2 7.0 113 444-567 5-117 (142)
124 4gcn_A Protein STI-1; structur 98.9 3.8E-09 1.3E-13 93.5 10.0 71 460-533 6-76 (127)
125 2ifu_A Gamma-SNAP; membrane fu 98.9 4.6E-08 1.6E-12 98.5 18.8 112 422-535 115-230 (307)
126 4a1s_A PINS, partner of inscut 98.9 4.8E-08 1.6E-12 99.5 18.2 109 422-530 262-374 (411)
127 3mkr_A Coatomer subunit epsilo 98.9 1.1E-08 3.7E-13 103.4 12.4 164 422-603 100-268 (291)
128 2l6j_A TPR repeat-containing p 98.9 3.5E-08 1.2E-12 81.9 12.9 71 462-535 4-74 (111)
129 3edt_B KLC 2, kinesin light ch 98.9 2.8E-08 9.7E-13 94.2 13.9 105 421-530 83-200 (283)
130 1dce_A Protein (RAB geranylger 98.8 1.2E-08 4E-13 113.8 12.5 166 429-605 34-227 (567)
131 2vyi_A SGTA protein; chaperone 98.8 1.6E-08 5.6E-13 84.7 10.4 85 423-515 46-130 (131)
132 2r5s_A Uncharacterized protein 98.8 3.3E-08 1.1E-12 90.9 12.0 81 440-528 91-173 (176)
133 3qou_A Protein YBBN; thioredox 98.8 4.5E-08 1.5E-12 98.1 13.6 95 426-528 188-284 (287)
134 2c2l_A CHIP, carboxy terminus 98.8 1E-08 3.5E-13 102.6 8.8 137 422-565 37-199 (281)
135 3rkv_A Putative peptidylprolyl 98.8 2.9E-08 9.9E-13 89.7 10.9 86 420-513 60-146 (162)
136 3ulq_A Response regulator aspa 98.8 1.7E-08 5.8E-13 103.4 10.3 109 426-534 106-219 (383)
137 3gw4_A Uncharacterized protein 98.8 3.5E-08 1.2E-12 90.2 11.4 113 422-534 25-142 (203)
138 1wao_1 Serine/threonine protei 98.8 4.5E-09 1.5E-13 114.1 6.3 107 422-536 39-158 (477)
139 3upv_A Heat shock protein STI1 98.8 3.4E-08 1.1E-12 85.2 10.6 83 422-512 37-125 (126)
140 2kck_A TPR repeat; tetratricop 98.8 1.7E-08 5.9E-13 82.7 8.1 71 453-531 2-72 (112)
141 2fbn_A 70 kDa peptidylprolyl i 98.8 3E-08 1E-12 92.5 10.7 98 423-528 88-186 (198)
142 2qfc_A PLCR protein; TPR, HTH, 98.8 3.3E-08 1.1E-12 98.4 11.4 108 422-530 154-268 (293)
143 3ro3_A PINS homolog, G-protein 98.8 4.1E-08 1.4E-12 84.7 10.5 109 422-530 48-160 (164)
144 2lni_A Stress-induced-phosphop 98.7 5.1E-08 1.7E-12 82.6 10.7 84 423-514 50-133 (133)
145 3sz7_A HSC70 cochaperone (SGT) 98.7 2.7E-08 9.1E-13 90.1 9.5 81 422-510 44-124 (164)
146 3nf1_A KLC 1, kinesin light ch 98.7 1E-08 3.6E-13 99.1 6.5 103 422-529 110-225 (311)
147 3u3w_A Transcriptional activat 98.7 2.2E-08 7.4E-13 99.6 8.9 109 422-530 154-268 (293)
148 1dce_A Protein (RAB geranylger 98.7 9E-08 3.1E-12 106.7 14.6 109 418-534 58-179 (567)
149 3q15_A PSP28, response regulat 98.7 6.7E-08 2.3E-12 99.2 12.5 112 422-536 181-298 (378)
150 2ifu_A Gamma-SNAP; membrane fu 98.7 4.5E-08 1.5E-12 98.6 10.8 112 422-534 75-190 (307)
151 3q15_A PSP28, response regulat 98.7 1.8E-07 6.3E-12 96.0 15.6 106 425-530 103-213 (378)
152 3dra_A Protein farnesyltransfe 98.7 1.1E-07 3.7E-12 98.6 13.8 164 432-606 41-222 (306)
153 1hxi_A PEX5, peroxisome target 98.7 1.4E-07 4.9E-12 82.7 12.5 98 463-566 18-115 (121)
154 3k9i_A BH0479 protein; putativ 98.7 9.5E-08 3.2E-12 82.2 10.9 74 421-502 25-98 (117)
155 1ouv_A Conserved hypothetical 98.7 2.4E-06 8.2E-11 82.9 22.0 183 292-530 17-217 (273)
156 2if4_A ATFKBP42; FKBP-like, al 98.7 1.8E-08 6E-13 104.1 7.1 101 425-533 232-333 (338)
157 1ouv_A Conserved hypothetical 98.7 1.7E-07 5.7E-12 91.1 13.2 164 420-601 35-217 (273)
158 1ihg_A Cyclophilin 40; ppiase 98.7 1.1E-07 3.7E-12 100.0 12.5 94 420-521 270-363 (370)
159 3q49_B STIP1 homology and U bo 98.6 2.2E-07 7.7E-12 80.1 11.8 104 452-566 4-107 (137)
160 3ma5_A Tetratricopeptide repea 98.6 5.7E-08 2E-12 82.1 7.6 68 422-494 6-73 (100)
161 3n71_A Histone lysine methyltr 98.6 3.9E-07 1.3E-11 100.2 16.3 117 412-528 298-422 (490)
162 2kc7_A BFR218_protein; tetratr 98.6 1.6E-07 5.6E-12 77.4 10.2 67 465-534 3-70 (99)
163 1na0_A Designed protein CTPR3; 98.6 3.8E-07 1.3E-11 75.6 12.3 83 423-513 43-125 (125)
164 2qfc_A PLCR protein; TPR, HTH, 98.6 6E-07 2.1E-11 89.2 15.4 109 422-530 114-227 (293)
165 3u3w_A Transcriptional activat 98.6 2.9E-07 9.8E-12 91.5 13.0 111 423-533 115-230 (293)
166 3q7a_A Farnesyltransferase alp 98.6 4.4E-07 1.5E-11 96.1 14.6 114 410-531 75-199 (349)
167 1na3_A Designed protein CTPR2; 98.6 2.5E-07 8.7E-12 74.1 10.0 68 462-532 9-76 (91)
168 3dra_A Protein farnesyltransfe 98.6 2.6E-07 8.9E-12 95.7 12.4 111 415-533 59-180 (306)
169 3dss_A Geranylgeranyl transfer 98.6 2.7E-07 9.1E-12 96.9 12.2 170 426-606 32-229 (331)
170 1elw_A TPR1-domain of HOP; HOP 98.6 6E-07 2.1E-11 73.9 11.8 79 423-509 38-116 (118)
171 2hr2_A Hypothetical protein; a 98.5 1.3E-07 4.4E-12 89.8 8.2 68 422-494 56-134 (159)
172 2ooe_A Cleavage stimulation fa 98.5 2.8E-07 9.6E-12 99.3 11.6 100 423-530 321-422 (530)
173 2xev_A YBGF; tetratricopeptide 98.5 3.4E-07 1.2E-11 78.1 9.4 71 463-533 3-73 (129)
174 3gw4_A Uncharacterized protein 98.5 5.1E-07 1.7E-11 82.5 10.5 113 422-534 65-182 (203)
175 2dba_A Smooth muscle cell asso 98.5 9.4E-07 3.2E-11 76.3 11.2 80 423-510 65-144 (148)
176 3dss_A Geranylgeranyl transfer 98.5 7.5E-06 2.6E-10 85.9 19.5 116 410-533 95-227 (331)
177 2kat_A Uncharacterized protein 98.5 8E-07 2.8E-11 75.5 10.0 84 423-512 19-102 (115)
178 3qww_A SET and MYND domain-con 98.4 1.4E-06 4.8E-11 94.4 13.5 103 426-528 301-411 (433)
179 1zu2_A Mitochondrial import re 98.4 2.6E-07 9E-12 87.6 6.8 71 419-494 32-123 (158)
180 3q7a_A Farnesyltransferase alp 98.4 1.2E-06 4E-11 92.8 11.5 160 436-606 67-244 (349)
181 2v5f_A Prolyl 4-hydroxylase su 98.3 3.3E-06 1.1E-10 72.6 11.1 80 424-506 6-87 (104)
182 2ooe_A Cleavage stimulation fa 98.3 1.2E-05 4E-10 86.6 17.9 100 425-532 358-458 (530)
183 1hz4_A MALT regulatory protein 98.3 6.2E-06 2.1E-10 83.5 13.7 107 425-531 55-167 (373)
184 1elr_A TPR2A-domain of HOP; HO 98.3 4.1E-06 1.4E-10 70.1 9.8 69 461-532 3-71 (131)
185 3rjv_A Putative SEL1 repeat pr 98.2 2.5E-05 8.6E-10 74.4 16.1 99 422-529 84-198 (212)
186 3qwp_A SET and MYND domain-con 98.2 7E-06 2.4E-10 88.6 13.2 105 424-528 288-400 (429)
187 1hz4_A MALT regulatory protein 98.2 7.6E-06 2.6E-10 82.8 12.3 110 422-531 13-125 (373)
188 1pc2_A Mitochondria fission pr 98.2 9.5E-06 3.2E-10 76.5 10.7 105 439-558 14-123 (152)
189 3rjv_A Putative SEL1 repeat pr 98.1 1.1E-05 3.9E-10 76.8 10.8 96 422-528 49-158 (212)
190 4f3v_A ESX-1 secretion system 98.1 1.4E-05 4.8E-10 82.2 11.7 102 425-531 137-240 (282)
191 4f3v_A ESX-1 secretion system 98.1 7.4E-06 2.5E-10 84.3 9.4 133 426-568 105-240 (282)
192 3bee_A Putative YFRE protein; 98.1 2.2E-05 7.6E-10 67.1 10.9 71 453-531 2-75 (93)
193 3n71_A Histone lysine methyltr 98.1 2.7E-05 9.4E-10 85.5 13.6 107 421-528 349-464 (490)
194 4b4t_Q 26S proteasome regulato 98.0 0.00011 3.9E-09 75.2 16.8 109 422-530 134-247 (434)
195 2xm6_A Protein corresponding t 98.0 0.00083 2.8E-08 71.4 22.6 162 423-602 255-435 (490)
196 2xm6_A Protein corresponding t 97.9 0.0002 7E-09 76.1 17.0 97 423-531 328-435 (490)
197 3ly7_A Transcriptional activat 97.9 0.0001 3.4E-09 78.7 14.0 98 424-530 197-341 (372)
198 1klx_A Cysteine rich protein B 97.9 0.00013 4.4E-09 65.5 11.8 89 429-529 31-127 (138)
199 4b4t_Q 26S proteasome regulato 97.8 9.1E-05 3.1E-09 76.0 11.1 107 428-534 100-210 (434)
200 3bee_A Putative YFRE protein; 97.8 0.00028 9.6E-09 60.2 11.8 68 422-494 5-75 (93)
201 3mv2_B Coatomer subunit epsilo 97.7 0.0011 3.8E-08 69.0 17.9 105 437-566 192-306 (310)
202 1xi4_A Clathrin heavy chain; a 97.6 0.00091 3.1E-08 81.6 17.6 125 424-563 1196-1343(1630)
203 2v5f_A Prolyl 4-hydroxylase su 97.6 0.00039 1.3E-08 59.5 10.4 72 462-533 5-80 (104)
204 3e4b_A ALGK; tetratricopeptide 97.5 0.00038 1.3E-08 74.3 10.8 91 426-527 179-279 (452)
205 3u64_A Protein TP_0956; tetrat 97.4 0.00053 1.8E-08 71.1 10.8 87 439-531 179-272 (301)
206 1b89_A Protein (clathrin heavy 97.4 0.00012 4.2E-09 79.8 6.4 163 422-603 147-311 (449)
207 3e4b_A ALGK; tetratricopeptide 97.4 0.0034 1.2E-07 66.9 16.5 43 307-349 165-210 (452)
208 1nzn_A CGI-135 protein, fissio 97.3 0.0018 6.1E-08 59.2 10.9 86 439-532 17-107 (126)
209 1klx_A Cysteine rich protein B 97.3 0.0013 4.5E-08 58.8 9.9 78 437-528 9-90 (138)
210 1pc2_A Mitochondria fission pr 97.2 0.0011 3.9E-08 62.3 8.9 79 423-508 32-114 (152)
211 1xi4_A Clathrin heavy chain; a 97.2 0.0019 6.6E-08 78.9 13.0 94 427-531 1053-1166(1630)
212 3ffl_A Anaphase-promoting comp 97.1 0.002 6.9E-08 61.5 9.8 100 425-524 22-147 (167)
213 3qww_A SET and MYND domain-con 97.0 0.0028 9.6E-08 68.5 10.9 70 421-491 338-411 (433)
214 3qwp_A SET and MYND domain-con 96.9 0.0035 1.2E-07 67.5 11.1 91 421-512 327-426 (429)
215 3mv2_B Coatomer subunit epsilo 96.9 0.0048 1.6E-07 64.2 11.5 100 426-530 103-209 (310)
216 3nmw_A APC variant protein; AR 96.5 0.0011 3.8E-08 69.8 3.2 118 49-166 41-202 (354)
217 2ff4_A Probable regulatory pro 96.3 0.039 1.3E-06 58.4 13.6 101 424-527 116-233 (388)
218 4db8_A Armadillo-repeat protei 95.9 0.0046 1.6E-07 59.3 3.9 117 41-169 13-130 (252)
219 4hxt_A De novo protein OR329; 95.8 0.037 1.3E-06 52.3 9.9 113 42-166 4-117 (252)
220 4e6h_A MRNA 3'-END-processing 95.7 0.23 7.8E-06 56.7 17.4 102 426-532 472-574 (679)
221 4gns_B Protein CSD3, chitin bi 95.6 0.22 7.6E-06 57.6 17.0 62 422-488 336-397 (754)
222 3ly7_A Transcriptional activat 95.6 0.043 1.5E-06 58.5 10.2 67 422-494 276-342 (372)
223 3txn_A 26S proteasome regulato 95.4 0.53 1.8E-05 50.4 17.9 103 428-530 104-212 (394)
224 4db6_A Armadillo repeat protei 95.4 0.014 4.9E-07 54.3 5.1 98 57-166 29-127 (210)
225 1b89_A Protein (clathrin heavy 95.2 0.025 8.6E-07 61.7 6.8 96 421-528 175-272 (449)
226 1y8m_A FIS1; mitochondria, unk 95.0 0.16 5.4E-06 47.4 10.7 90 462-560 39-131 (144)
227 3o48_A Mitochondria fission 1 95.0 0.15 5.2E-06 47.0 10.4 69 462-532 40-111 (134)
228 4b8j_A Importin subunit alpha- 94.6 0.082 2.8E-06 56.7 9.0 96 59-166 222-317 (528)
229 4db8_A Armadillo-repeat protei 94.6 0.027 9.3E-07 53.9 4.6 96 59-166 115-211 (252)
230 4db6_A Armadillo repeat protei 94.6 0.028 9.5E-07 52.4 4.6 96 59-166 73-169 (210)
231 4hxt_A De novo protein OR329; 94.4 0.026 8.8E-07 53.4 4.0 101 57-169 145-246 (252)
232 2z6h_A Catenin beta-1, beta-ca 94.4 0.12 4E-06 57.5 9.7 95 59-166 243-338 (644)
233 3u64_A Protein TP_0956; tetrat 94.3 0.18 6.2E-06 52.2 10.3 53 477-532 178-237 (301)
234 1xqr_A HSPBP1 protein; armadil 94.2 0.025 8.4E-07 58.1 3.5 95 59-165 144-239 (296)
235 1nzn_A CGI-135 protein, fissio 94.0 0.18 6E-06 46.0 8.5 76 425-507 37-116 (126)
236 3tpo_A Importin subunit alpha- 94.0 0.066 2.3E-06 58.2 6.6 116 42-168 78-195 (529)
237 3ffl_A Anaphase-promoting comp 93.9 0.15 5E-06 48.7 7.9 84 422-509 62-165 (167)
238 3nmz_A APC variant protein; pr 93.8 0.061 2.1E-06 58.6 5.9 96 60-166 220-318 (458)
239 1xm9_A Plakophilin 1; armadill 93.7 0.11 3.6E-06 55.8 7.6 111 52-173 14-125 (457)
240 4e6h_A MRNA 3'-END-processing 93.6 0.29 9.8E-06 55.9 11.3 81 440-528 326-407 (679)
241 2z6g_A B-catenin; FULL-length, 93.4 0.36 1.2E-05 55.4 11.6 94 60-166 380-474 (780)
242 3o48_A Mitochondria fission 1 93.3 0.2 6.8E-06 46.2 7.5 77 425-508 42-121 (134)
243 3tt9_A Plakophilin-2; cell adh 93.3 0.056 1.9E-06 53.8 4.2 105 57-172 27-132 (233)
244 4gns_B Protein CSD3, chitin bi 92.8 0.18 6.2E-06 58.3 7.9 60 463-525 338-397 (754)
245 1y8m_A FIS1; mitochondria, unk 92.7 0.43 1.5E-05 44.4 8.9 74 425-505 41-117 (144)
246 3l6x_A Catenin delta-1; cateni 92.4 0.1 3.5E-06 58.7 5.1 122 41-173 49-172 (584)
247 1wa5_B Importin alpha subunit; 91.8 0.31 1.1E-05 52.4 7.9 96 59-166 234-330 (530)
248 4b8j_A Importin subunit alpha- 91.7 0.15 5.3E-06 54.6 5.3 118 39-167 73-192 (528)
249 3ul1_B Importin subunit alpha- 91.3 0.26 8.7E-06 53.4 6.6 117 42-169 59-177 (510)
250 3nmz_A APC variant protein; pr 91.3 1.5 5E-05 47.7 12.5 125 60-186 102-251 (458)
251 2jdq_A Importin alpha-1 subuni 91.1 0.52 1.8E-05 48.5 8.4 97 59-167 169-266 (450)
252 4b4t_R RPN7, 26S proteasome re 90.4 1.1 3.9E-05 47.7 10.5 104 425-530 133-239 (429)
253 1wa5_B Importin alpha subunit; 89.7 0.27 9.1E-06 52.9 4.9 118 38-167 85-205 (530)
254 1xqr_A HSPBP1 protein; armadil 89.5 0.08 2.7E-06 54.3 0.6 123 33-165 24-155 (296)
255 2jdq_A Importin alpha-1 subuni 89.5 0.29 1E-05 50.4 4.9 67 100-166 115-181 (450)
256 1jdh_A Beta-catenin; beta-cate 89.5 0.95 3.2E-05 47.7 8.9 106 59-173 285-394 (529)
257 1zbp_A Hypothetical protein VP 88.3 4.2 0.00014 41.5 12.3 60 430-494 4-63 (273)
258 4h7y_A Dual specificity protei 88.1 4.4 0.00015 38.3 11.3 87 440-530 36-125 (161)
259 3tpo_A Importin subunit alpha- 87.5 0.66 2.3E-05 50.3 6.3 103 59-172 139-246 (529)
260 3nmw_A APC variant protein; AR 87.5 0.15 5E-06 53.6 1.0 97 60-168 238-338 (354)
261 3ul1_B Importin subunit alpha- 86.8 1 3.6E-05 48.6 7.3 105 58-173 119-228 (510)
262 3now_A UNC-45 protein, SD10334 86.0 2.7 9.3E-05 49.0 10.6 132 52-186 342-544 (810)
263 4g26_A Pentatricopeptide repea 86.0 10 0.00036 41.1 14.7 96 425-528 107-204 (501)
264 1jdh_A Beta-catenin; beta-cate 84.7 0.68 2.3E-05 48.8 4.5 106 57-173 118-224 (529)
265 4b4t_P 26S proteasome regulato 82.9 8 0.00028 41.5 12.0 106 423-528 137-247 (445)
266 2uy1_A Cleavage stimulation fa 82.9 52 0.0018 35.3 18.5 93 424-525 287-380 (493)
267 2uy1_A Cleavage stimulation fa 82.9 6.6 0.00023 42.4 11.4 103 424-531 214-352 (493)
268 3kae_A CDC27, possible protein 82.6 15 0.00052 35.6 12.2 93 428-530 38-145 (242)
269 1zbp_A Hypothetical protein VP 81.9 6.8 0.00023 40.0 10.2 58 470-530 5-62 (273)
270 1ya0_A SMG-7 transcript varian 80.9 6.7 0.00023 43.1 10.5 79 425-511 154-232 (497)
271 3tt9_A Plakophilin-2; cell adh 80.8 1.5 5E-05 43.6 4.8 73 111-186 29-102 (233)
272 2z6h_A Catenin beta-1, beta-ca 78.4 1.8 6.2E-05 47.9 5.1 107 57-174 115-222 (644)
273 2z6g_A B-catenin; FULL-length, 77.9 1.8 6.3E-05 49.6 5.1 106 59-175 253-359 (780)
274 3now_A UNC-45 protein, SD10334 77.6 0.86 2.9E-05 53.1 2.3 98 59-167 555-655 (810)
275 3l6x_A Catenin delta-1; cateni 77.0 2.7 9.2E-05 47.2 6.0 81 103-186 59-141 (584)
276 1xm9_A Plakophilin 1; armadill 75.2 1.5 5.1E-05 46.8 3.2 61 104-165 14-74 (457)
277 2ff4_A Probable regulatory pro 73.6 13 0.00044 39.0 9.8 60 425-489 173-232 (388)
278 4b4t_R RPN7, 26S proteasome re 70.7 6.6 0.00023 41.8 6.9 85 461-545 130-214 (429)
279 4h7y_A Dual specificity protei 69.4 25 0.00085 33.2 9.6 71 435-514 72-142 (161)
280 3ax2_A Mitochondrial import re 69.1 20 0.0007 29.5 7.9 34 423-456 17-50 (73)
281 4g26_A Pentatricopeptide repea 68.2 25 0.00085 38.1 10.9 83 437-529 84-170 (501)
282 3mkq_A Coatomer beta'-subunit; 67.3 19 0.00065 39.6 9.9 27 462-488 681-707 (814)
283 2w2u_A Hypothetical P60 katani 67.1 9.5 0.00032 32.0 5.7 33 420-452 16-48 (83)
284 2v6y_A AAA family ATPase, P60 65.8 9.1 0.00031 31.9 5.3 32 421-452 9-40 (83)
285 1ya0_A SMG-7 transcript varian 63.6 17 0.0006 39.8 8.5 63 463-528 153-215 (497)
286 3mkq_A Coatomer beta'-subunit; 63.3 37 0.0013 37.3 11.2 27 423-449 681-707 (814)
287 4fhn_B Nucleoporin NUP120; pro 60.1 18 0.0006 43.4 8.4 97 427-523 846-962 (1139)
288 2v6x_A Vacuolar protein sortin 57.3 16 0.00054 30.3 5.3 31 422-452 12-42 (85)
289 3mkq_B Coatomer subunit alpha; 56.4 58 0.002 31.0 9.7 82 423-525 34-115 (177)
290 1wfd_A Hypothetical protein 15 55.2 17 0.0006 30.8 5.3 31 422-452 14-44 (93)
291 4a5x_A MITD1, MIT domain-conta 53.8 17 0.00059 30.5 5.0 31 422-452 15-45 (86)
292 2cpt_A SKD1 protein, vacuolar 51.3 20 0.0007 31.8 5.3 31 422-452 17-47 (117)
293 3mkr_B Coatomer subunit alpha; 47.8 41 0.0014 35.0 7.7 102 426-530 105-229 (320)
294 3spa_A Mtrpol, DNA-directed RN 47.5 1.8E+02 0.0063 35.1 14.0 95 425-529 129-231 (1134)
295 2cfu_A SDSA1; SDS-hydrolase, l 45.2 54 0.0019 37.0 8.9 63 410-477 432-498 (658)
296 3opb_A SWI5-dependent HO expre 44.7 19 0.00064 41.8 5.0 59 125-186 447-506 (778)
297 3mv2_A Coatomer subunit alpha; 44.3 31 0.0011 36.0 6.1 102 426-530 117-238 (325)
298 1om2_A Protein (mitochondrial 41.1 33 0.0011 29.7 4.8 33 424-456 21-53 (95)
299 4fhn_B Nucleoporin NUP120; pro 37.3 2.2E+02 0.0074 34.0 12.8 92 430-530 819-930 (1139)
300 1b3u_A Protein (protein phosph 35.1 77 0.0026 33.2 7.7 33 132-165 279-311 (588)
301 2vkj_A TM1634; membrane protei 34.9 1.4E+02 0.0047 25.8 7.5 35 421-455 51-85 (106)
302 3txn_A 26S proteasome regulato 34.6 2.7E+02 0.0091 29.5 11.7 62 467-528 104-168 (394)
303 1oyz_A Hypothetical protein YI 34.6 17 0.00058 35.0 2.2 55 104-170 35-89 (280)
304 3ltj_A Alpharep-4; protein eng 34.4 34 0.0012 31.1 4.2 28 134-162 138-165 (201)
305 2w2u_A Hypothetical P60 katani 34.3 30 0.001 28.8 3.5 25 502-526 22-46 (83)
306 3kae_A CDC27, possible protein 33.4 2.5E+02 0.0085 27.3 9.9 73 422-494 61-146 (242)
307 2v6y_A AAA family ATPase, P60 32.4 34 0.0012 28.4 3.5 23 504-526 16-38 (83)
308 4b4t_S RPN3, 26S proteasome re 32.4 1E+02 0.0035 34.1 8.2 76 458-533 227-304 (523)
309 1te4_A Conserved protein MTH18 31.0 19 0.00065 31.0 1.7 48 105-164 55-102 (131)
310 2crb_A Nuclear receptor bindin 29.0 59 0.002 28.1 4.4 28 461-488 14-41 (97)
311 2crb_A Nuclear receptor bindin 28.5 68 0.0023 27.8 4.6 30 499-528 15-44 (97)
312 3opb_A SWI5-dependent HO expre 28.3 23 0.0008 41.1 2.3 52 112-164 477-530 (778)
313 1wy6_A Hypothetical protein ST 27.6 2.3E+02 0.0078 26.6 8.3 81 435-528 73-154 (172)
314 2wb7_A PT26-6P; extra chromoso 27.4 85 0.0029 34.6 6.3 27 502-528 490-516 (526)
315 1qsa_A Protein (soluble lytic 27.3 1.8E+02 0.0062 32.6 9.3 92 427-527 256-347 (618)
316 2rpa_A Katanin P60 ATPase-cont 26.1 57 0.0019 27.1 3.7 28 425-452 14-41 (78)
317 3mkq_B Coatomer subunit alpha; 25.9 1.2E+02 0.0039 28.9 6.3 25 463-487 35-59 (177)
318 3ltm_A Alpha-REP4; protein eng 25.6 52 0.0018 30.0 3.8 48 105-164 32-79 (211)
319 1te4_A Conserved protein MTH18 25.5 48 0.0016 28.4 3.3 51 101-164 21-71 (131)
320 3t5x_A PCI domain-containing p 25.3 2.3E+02 0.0077 27.0 8.4 58 422-479 13-70 (203)
321 3ltm_A Alpha-REP4; protein eng 23.5 55 0.0019 29.8 3.5 15 30-44 28-42 (211)
322 3t5x_A PCI domain-containing p 22.8 95 0.0033 29.6 5.2 36 459-494 11-46 (203)
323 2cfu_A SDSA1; SDS-hydrolase, l 22.2 1.1E+02 0.0038 34.4 6.4 53 463-518 450-502 (658)
324 1w63_A Adapter-related protein 21.5 79 0.0027 34.9 4.9 30 135-165 314-343 (618)
325 3myv_A SUSD superfamily protei 21.3 1.8E+02 0.0061 30.8 7.5 51 440-490 165-218 (454)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.78 E-value=3.9e-18 Score=152.06 Aligned_cols=106 Identities=23% Similarity=0.213 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccH
Q 047433 420 RVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHC 499 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~ 499 (614)
++.++.++++|+.+|+.|+|++|+..|+++|+++|.+ +.+|.|+|.||.++|++++|+.++++||+++|+ +.
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---~~ 81 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN-----AILYSNRAACLTKLMEFQRALDDCDTCIRLDSK---FI 81 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh---hh
Confidence 4577899999999999999999999999999999999 999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 500 KSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 500 KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
++|+++|.++..+|++++|+.+|+++++++|++.
T Consensus 82 ~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~ 115 (126)
T 4gco_A 82 KGYIRKAACLVAMREWSKAQRAYEDALQVDPSNE 115 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCH
Confidence 9999999999999999999999999999999643
No 2
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.72 E-value=2e-17 Score=150.41 Aligned_cols=111 Identities=23% Similarity=0.287 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCC-----cchhHHHHHHHHHHHHHcCCcHHHHHH
Q 047433 418 EMRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGV--------CPSRP-----KNERMVLYSNRAQCHLLLREPDAAISD 484 (614)
Q Consensus 418 ~~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel--------~P~~~-----~~~~a~lysNRA~~ylkLGdyeeAI~D 484 (614)
++.+.+..+++.|+.+|+.|+|++|+..|+++|.+ .|.+. ......+|.|+|.||+++|+|++|+.+
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 34557889999999999999999999999999999 22221 122378999999999999999999999
Q ss_pred HHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 485 ATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 485 ~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
|++||+++|. +.++|+++|.+|..+|++++|+.+|+++++++|+
T Consensus 86 ~~~al~~~p~---~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~ 129 (162)
T 3rkv_A 86 SSEVLKREET---NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPA 129 (162)
T ss_dssp HHHHHHHSTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG
T ss_pred HHHHHhcCCc---chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCC
Confidence 9999999999 9999999999999999999999999999999884
No 3
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.72 E-value=6.1e-17 Score=153.97 Aligned_cols=111 Identities=22% Similarity=0.182 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-------CCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc-
Q 047433 420 RVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPS-------RPKNERMVLYSNRAQCHLLLREPDAAISDATRALCL- 491 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~-------~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL- 491 (614)
...+..+++.|+.+|+.|+|++|+..|++||+++|+ +.....+.+|+|||.|+.++|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~ 87 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 87 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 347889999999999999999999999999999998 311123459999999999999999999999999999
Q ss_pred ------CCCCCccHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 492 ------SNPPNSHCKSL----WRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 492 ------dP~~~~~~KAy----yRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
+|+ +.++| |++|.++..+|++++|+.+|++++++.|++.
T Consensus 88 n~~~e~~pd---~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 88 NRRGELNQD---EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHCCTTST---HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hccccCCCc---hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 999 99999 9999999999999999999999999988533
No 4
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.70 E-value=1.4e-16 Score=141.73 Aligned_cols=105 Identities=13% Similarity=0.123 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCc---
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNS--- 497 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~--- 497 (614)
+.+..+++.|+.+|+.|+|++|+..|++||+++|++ +.+|.|+|.+|+++|+|++|+.++++||+++|....
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~-----~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 80 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSN-----ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYK 80 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhH
Confidence 467789999999999999999999999999999999 999999999999999999999999999999987211
Q ss_pred -cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 498 -HCKSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 498 -~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
..++|+++|.++..+|++++|+..|+++++..|
T Consensus 81 ~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~ 114 (127)
T 4gcn_A 81 LIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFR 114 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCc
Confidence 247999999999999999999999999999987
No 5
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1.4e-15 Score=132.04 Aligned_cols=101 Identities=21% Similarity=0.111 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|+.++..|+|++|+..|+++|+++|.+ +.+|.|+|.+|+++|+|++|+.+++++++++|+ +..+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~~ 74 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED-----ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN---FVRA 74 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-----hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---cHHH
Confidence 56789999999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
|+++|.++..+|++++|+..|++++++.|
T Consensus 75 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p 103 (126)
T 3upv_A 75 YIRKATAQIAVKEYASALETLDAARTKDA 103 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999983
No 6
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.64 E-value=5.2e-15 Score=151.05 Aligned_cols=289 Identities=14% Similarity=0.064 Sum_probs=195.4
Q ss_pred hcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHHHH
Q 047433 291 YSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLGEAI 368 (614)
Q Consensus 291 ~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe~i 368 (614)
+...|+ +|+..++++++..|+.. ..|..++.++...++.+.+...+.+++..-||...... .+|..+
T Consensus 77 ~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~------~l~~~~ 145 (388)
T 1w3b_A 77 YKERGQLQEAIEHYRHALRLKPDFI-----DGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRS------DLGNLL 145 (388)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHH------HHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHcCcchH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH------HHHHHH
Confidence 344554 79999999999888776 67888888888999999999999888887777655441 111111
Q ss_pred H-----HHHHHhhhhhhh-ccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Q 047433 369 T-----RALLLDYKLTEQ-KFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIEEA 442 (614)
Q Consensus 369 t-----~aLl~dy~~~~~-~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~GdyeeA 442 (614)
. ..-...|..... .|++..+...+..+.... .+.+... ..-.+-+...+..+..+...|..+...|++++|
T Consensus 146 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~-g~~~~A~--~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A 222 (388)
T 1w3b_A 146 KALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQ-GEIWLAI--HHFEKAVTLDPNFLDAYINLGNVLKEARIFDRA 222 (388)
T ss_dssp HTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT-TCHHHHH--HHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHH
T ss_pred HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHH--HHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHH
Confidence 1 011122222222 455555554444332211 0000100 011111112223456788999999999999999
Q ss_pred HHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHH
Q 047433 443 AMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDC 522 (614)
Q Consensus 443 I~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df 522 (614)
+..|.+++.+.|++ ..++.++|.+|.++|++++|+..++++++++|+ +..+++.+|.++...|++++|+..|
T Consensus 223 ~~~~~~al~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~~g~~~~A~~~~ 294 (388)
T 1w3b_A 223 VAAYLRALSLSPNH-----AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH---FPDAYCNLANALKEKGSVAEAEDCY 294 (388)
T ss_dssp HHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS---CHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHhhCcCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC---CHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999999999999 999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCcCCcccchhhhHHHHHHHHHHhccc
Q 047433 523 IMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPVNNVQESYGENKSGIEEQRYCDMIRTMMEKKN 602 (614)
Q Consensus 523 ~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~~e~~~~~~~g~~eQ~~dD~iral~~~~~ 602 (614)
++++++.|++. .....+. ......++.-++...|.+++...+..+.............|..+++...+.+++..+|+
T Consensus 295 ~~al~~~p~~~--~~~~~l~-~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~ 371 (388)
T 1w3b_A 295 NTALRLCPTHA--DSLNNLA-NIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 371 (388)
T ss_dssp HHHHHHCTTCH--HHHHHHH-HHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTT
T ss_pred HHHHhhCcccH--HHHHHHH-HHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 99999988533 2222221 11112233345566677776655443333333333445667778888888888888776
Q ss_pred cc
Q 047433 603 LI 604 (614)
Q Consensus 603 ~~ 604 (614)
+.
T Consensus 372 ~~ 373 (388)
T 1w3b_A 372 FA 373 (388)
T ss_dssp CH
T ss_pred CH
Confidence 54
No 7
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.61 E-value=1.3e-14 Score=148.02 Aligned_cols=286 Identities=14% Similarity=-0.005 Sum_probs=196.1
Q ss_pred hcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhh--------hccCC
Q 047433 291 YSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELN--------SLLDR 360 (614)
Q Consensus 291 ~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~--------~Lg~~ 360 (614)
+...|+ +|+..++.+++..|+.+ ..|..++.++...++.+.+...+.+++..-|+..... ..|..
T Consensus 43 ~~~~~~~~~a~~~~~~a~~~~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 117 (388)
T 1w3b_A 43 HFQCRRLDRSAHFSTLAIKQNPLLA-----EAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDM 117 (388)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCS
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCch-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCH
Confidence 344555 78889999999988877 7899999999999999999999999988877765532 11222
Q ss_pred CcCcHHHHHHHHHHhhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Q 047433 361 PKNLGEAITRALLLDYKLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIE 440 (614)
Q Consensus 361 ~k~lGe~it~aLl~dy~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~Gdye 440 (614)
...-+.+.+++.. .|++..+...+..+.... .+.+... ..-..-+...+..+..+...|..+...|+++
T Consensus 118 -~~A~~~~~~al~~-------~p~~~~~~~~l~~~~~~~-g~~~~A~--~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 186 (388)
T 1w3b_A 118 -EGAVQAYVSALQY-------NPDLYCVRSDLGNLLKAL-GRLEEAK--ACYLKAIETQPNFAVAWSNLGCVFNAQGEIW 186 (388)
T ss_dssp -SHHHHHHHHHHHH-------CTTCTHHHHHHHHHHHTT-SCHHHHH--HHHHHHHHHCTTCHHHHHHHHHHHHTTTCHH
T ss_pred -HHHHHHHHHHHHh-------CCCcHHHHHHHHHHHHHc-cCHHHHH--HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH
Confidence 2222222222221 455554444444333211 0111111 1111111222334567889999999999999
Q ss_pred HHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHH
Q 047433 441 EAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLM 520 (614)
Q Consensus 441 eAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~ 520 (614)
+|+..|+++++++|+. ..++.++|.++...|++++|+..+.++++++|+ +..+++.+|.++..+|++++|+.
T Consensus 187 ~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~~g~~~~A~~ 258 (388)
T 1w3b_A 187 LAIHHFEKAVTLDPNF-----LDAYINLGNVLKEARIFDRAVAAYLRALSLSPN---HAVVHGNLACVYYEQGLIDLAID 258 (388)
T ss_dssp HHHHHHHHHHHHCTTC-----HHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhcCCCc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC---CHHHHHHHHHHHHHcCCHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCcCCcccchhhhHHHHHHHHHHhc
Q 047433 521 DCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPVNNVQESYGENKSGIEEQRYCDMIRTMMEK 600 (614)
Q Consensus 521 df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~~e~~~~~~~g~~eQ~~dD~iral~~~ 600 (614)
.|+++++..|+..+. ...+. ......++..++...|.+++...+..+.............+..+++...+.+++...
T Consensus 259 ~~~~al~~~p~~~~~--~~~l~-~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 335 (388)
T 1w3b_A 259 TYRRAIELQPHFPDA--YCNLA-NALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF 335 (388)
T ss_dssp HHHHHHHTCSSCHHH--HHHHH-HHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHhhCCCCHHH--HHHHH-HHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 999999998854332 22222 122223334556677888877765443333333333344555566666666666655
Q ss_pred ccc
Q 047433 601 KNL 603 (614)
Q Consensus 601 ~~~ 603 (614)
|++
T Consensus 336 p~~ 338 (388)
T 1w3b_A 336 PEF 338 (388)
T ss_dssp TTC
T ss_pred CCc
Confidence 543
No 8
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.60 E-value=1.4e-14 Score=134.53 Aligned_cols=104 Identities=13% Similarity=-0.042 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccH
Q 047433 420 RVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHC 499 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~ 499 (614)
+..+..+...|..+++.|+|++|+..|++++.++|.+ +.+|.|+|.+|..+|+|++|+..|++|++++|+ ++
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~-----~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~---~~ 104 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYN-----VDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN---DY 104 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSS---CC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCC---Cc
Confidence 3455689999999999999999999999999999999 999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 500 KSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 500 KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
.+|+++|.+|..+|++++|+..|++++++.|+
T Consensus 105 ~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~ 136 (151)
T 3gyz_A 105 TPVFHTGQCQLRLKAPLKAKECFELVIQHSND 136 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999883
No 9
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.60 E-value=2.2e-14 Score=130.57 Aligned_cols=108 Identities=19% Similarity=0.058 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHH
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCK 500 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~K 500 (614)
..+..+...|+.++..|+|++|+..|+++|+++|.+ ..+|.|+|.+|+++|+|++|+.+++++++++|+ +..
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---~~~ 80 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN-----PIYLSNRAAAYSASGQHEKAAEDAELATVVDPK---YSK 80 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---CHH
Confidence 367789999999999999999999999999999999 999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChH
Q 047433 501 SLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTS 536 (614)
Q Consensus 501 AyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~ 536 (614)
+|+++|.+|..+|++++|+..|++++++.|++.+..
T Consensus 81 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 116 (164)
T 3sz7_A 81 AWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDA 116 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 999999999999999999999999999999766543
No 10
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.56 E-value=1.3e-14 Score=139.40 Aligned_cols=169 Identities=12% Similarity=-0.004 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|..++..|++++|+..|+++|+++|++ +.++.++|.++..+|++++|+..++++++++|+ +..++
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~---~~~a~ 76 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKENPQD-----PEALYWLARTQLKLGLVNPALENGKTLVARTPR---YLGGY 76 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHHHH
Confidence 4467788888888888888888888888888888 888888888888888888888888888888888 88888
Q ss_pred HHHHHHHHHc-----------CCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 047433 503 WRRSQAYDMK-----------GLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPV 571 (614)
Q Consensus 503 yRRA~Al~~L-----------G~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~ 571 (614)
+.+|.++..+ |++++|+..|++++++.|++... ...+. .+....++.-++...|.+++..+ ..+.
T Consensus 77 ~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~--~~~lg-~~~~~~g~~~~A~~~~~~al~~~-~~~~ 152 (217)
T 2pl2_A 77 MVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPL--HLQRG-LVYALLGERDKAEASLKQALALE-DTPE 152 (217)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHH--HHHHH-HHHHHTTCHHHHHHHHHHHHHHC-CCHH
T ss_pred HHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHH--HHHHH-HHHHHcCChHHHHHHHHHHHhcc-cchH
Confidence 8888888888 88888888888888888853322 22222 12222333445666777777766 4444
Q ss_pred CCccCCcCCcccchhhhHHHHHHHHHHhcccc
Q 047433 572 NNVQESYGENKSGIEEQRYCDMIRTMMEKKNL 603 (614)
Q Consensus 572 ~~~~e~~~~~~~g~~eQ~~dD~iral~~~~~~ 603 (614)
...+........|..+++...+.+++...|++
T Consensus 153 ~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 184 (217)
T 2pl2_A 153 IRSALAELYLSMGRLDEALAQYAKALEQAPKD 184 (217)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 44444444455666777777777777777765
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.55 E-value=3.3e-14 Score=130.29 Aligned_cols=171 Identities=10% Similarity=0.040 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+.+.|+.++..|+|++|+..|+++|+++|++ +.++.++|.+|.++|++++|+..+.+++..+|. +..+
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~---~~~~ 75 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN-----VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT---SAEA 75 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC---CHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch---hHHH
Confidence 45678899999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCcCCc
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPVNNVQESYGEN 581 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~~e~~~~~ 581 (614)
+..+|.++...+++++|...+.+++++.|++.+. ...+. ......++..++...|.+++..++..+....+.+....
T Consensus 76 ~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~--~~~lg-~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~ 152 (184)
T 3vtx_A 76 YYILGSANFMIDEKQAAIDALQRAIALNTVYADA--YYKLG-LVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYE 152 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHH-HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHH--HHHHH-HHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHH
Confidence 9999999999999999999999999999854332 22222 22222334456667788888877666655555566667
Q ss_pred ccchhhhHHHHHHHHHHhcccc
Q 047433 582 KSGIEEQRYCDMIRTMMEKKNL 603 (614)
Q Consensus 582 ~~g~~eQ~~dD~iral~~~~~~ 603 (614)
..|..++++..+.++|..+|+.
T Consensus 153 ~~g~~~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 153 GKGLRDEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HTTCHHHHHHHHHHHHHTTHHH
T ss_pred HCCCHHHHHHHHHHHHhCCccC
Confidence 7888889999999999988864
No 12
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.55 E-value=1e-13 Score=124.02 Aligned_cols=104 Identities=6% Similarity=-0.065 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..++..|+|++|+..|++++..+|.+ +.+|.++|.+|..+|+|++|+..++++++++|+ ++.+
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~~ 88 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYD-----ARYFLGLGACRQSLGLYEQALQSYSYGALMDIN---EPRF 88 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CTHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCcc-----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC---CcHH
Confidence 45578899999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
++.+|.++..+|++++|+..|++++++.|+++
T Consensus 89 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 120 (142)
T 2xcb_A 89 PFHAAECHLQLGDLDGAESGFYSARALAAAQP 120 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999988544
No 13
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.54 E-value=2.4e-14 Score=136.58 Aligned_cols=169 Identities=11% Similarity=0.017 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHH----------------HHHHHHHcCCcHHHHHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSN----------------RAQCHLLLREPDAAISDAT 486 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysN----------------RA~~ylkLGdyeeAI~D~~ 486 (614)
+..+..+|..++..|+|++|+..|+++++++|++ +.++.+ +|.+|.++|++++|+..++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 78 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDR-----TEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYK 78 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHH-----HHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-----hHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4578889999999999999999999999999998 888888 9999999999999999999
Q ss_pred HHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcC
Q 047433 487 RALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKI 566 (614)
Q Consensus 487 ~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~ 566 (614)
++++++|+ +..+++.+|.++..+|++++|+..|+++++++|++.+.......-++... ....-.....|..++.
T Consensus 79 ~al~~~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~-~~~~~~~~~~~~~~~~-- 152 (208)
T 3urz_A 79 ELLQKAPN---NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTA-EQEKKKLETDYKKLSS-- 152 (208)
T ss_dssp HHHHHCTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-HHHHHHHHHHHC---C--
T ss_pred HHHHHCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHhC--
Confidence 99999999 99999999999999999999999999999999965443322222211111 1111112233333321
Q ss_pred CCCCCC--CccCCcCCcccchhhhHHHHHHHHHHhcccc
Q 047433 567 LSSPVN--NVQESYGENKSGIEEQRYCDMIRTMMEKKNL 603 (614)
Q Consensus 567 ~~~~~~--~~~e~~~~~~~g~~eQ~~dD~iral~~~~~~ 603 (614)
+++.. ....+......+..+++..++.+++..+|+.
T Consensus 153 -~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 153 -PTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred -CCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 11110 0111112223445567888888888888864
No 14
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.54 E-value=1.1e-13 Score=126.26 Aligned_cols=104 Identities=10% Similarity=0.025 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..++..|+|++|+..|++++.++|.+ +.+|.++|.+|..+|+|++|+..++++++++|+ ++.+
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~---~~~~ 91 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYD-----SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX---EPRF 91 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CTHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCccc-----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC---CchH
Confidence 45578899999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
++.+|.+|..+|++++|+..|++++++.|+++
T Consensus 92 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 123 (148)
T 2vgx_A 92 PFHAAECLLQXGELAEAESGLFLAQELIANXP 123 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 99999999999999999999999999998643
No 15
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.53 E-value=4e-14 Score=134.44 Aligned_cols=101 Identities=17% Similarity=0.070 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC-CCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCP-SRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P-~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
..+...|..++..|+|++|+..|+++++++| .+ ..++.++|.++..+|++++|+..++++++++|. +..++
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~ 79 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQD-----SVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN---LANAY 79 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS---HHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCC-----cHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc---hHHHH
Confidence 4678888888888888888888888888887 66 778888888888888888888888888888888 88888
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
+.+|.++..+|++++|+..|++++++.|++
T Consensus 80 ~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 109 (228)
T 4i17_A 80 IGKSAAYRDMKNNQEYIATLTEGIKAVPGN 109 (228)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 888888888888888888888888888853
No 16
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.52 E-value=1.3e-13 Score=148.56 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC----------cchhHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Q 047433 420 RVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRP----------KNERMVLYSNRAQCHLLLREPDAAISDATRAL 489 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~----------~~~~a~lysNRA~~ylkLGdyeeAI~D~~~AL 489 (614)
+..+..++.+|+.+++.|+|++|+..|++||+++|.+. ......+|+|+|.||+++|+|++|+.+|++||
T Consensus 265 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 344 (457)
T 1kt0_A 265 LEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKAL 344 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 44677899999999999999999999999999999862 22346899999999999999999999999999
Q ss_pred hcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCCh
Q 047433 490 CLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETT 535 (614)
Q Consensus 490 eLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~ 535 (614)
+++|+ +.++|+++|.+|..+|++++|+.+|+++++++|++...
T Consensus 345 ~~~p~---~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a 387 (457)
T 1kt0_A 345 GLDSA---NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAA 387 (457)
T ss_dssp HHSTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CH
T ss_pred hcCCc---cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH
Confidence 99999 99999999999999999999999999999999976553
No 17
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.52 E-value=3.3e-14 Score=163.03 Aligned_cols=169 Identities=14% Similarity=-0.051 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+.+.|+.+.+.|+|++|+..|++||+++|++ +.+|+|+|.+|.++|++++|+..+++||+++|+ +..+
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~-----~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~---~~~a 79 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-----AAAHSNLASVLQQQGKLQEALMHYKEAIRISPT---FADA 79 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHH
Confidence 45566666666666666666666666666666666 666666666666666666666666666666666 6666
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCcCCc
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPVNNVQESYGEN 581 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~~e~~~~~ 581 (614)
|+++|.+|..+|++++|++.|+++++++|++.+. ...+. .+....++..++...|+++++.++..+....+......
T Consensus 80 ~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a--~~~Lg-~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~ 156 (723)
T 4gyw_A 80 YSNMGNTLKEMQDVQGALQCYTRAIQINPAFADA--HSNLA-SIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQ 156 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHH-HHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHH
Confidence 6666666666666666666666666666643222 12221 12222333344555566666555444433333333333
Q ss_pred ccchhhhHHHHHHHHHHhcc
Q 047433 582 KSGIEEQRYCDMIRTMMEKK 601 (614)
Q Consensus 582 ~~g~~eQ~~dD~iral~~~~ 601 (614)
..+.-+++.+.+.+++...|
T Consensus 157 ~~g~~~~A~~~~~kal~l~~ 176 (723)
T 4gyw_A 157 IVCDWTDYDERMKKLVSIVA 176 (723)
T ss_dssp HTTCCTTHHHHHHHHHHHHH
T ss_pred hcccHHHHHHHHHHHHHhCh
Confidence 44444445555555544443
No 18
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.52 E-value=5.1e-12 Score=119.14 Aligned_cols=210 Identities=15% Similarity=0.080 Sum_probs=150.2
Q ss_pred hhcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchh-------hhhhccCC
Q 047433 290 CYSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLV-------ELNSLLDR 360 (614)
Q Consensus 290 ~~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLs-------eL~~Lg~~ 360 (614)
++...|+ +|+..+.++++.. + +...+..++.++..+++.+.+...+.+++...++.. .+.
T Consensus 14 ~~~~~~~~~~A~~~~~~a~~~~-~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~----- 82 (258)
T 3uq3_A 14 KFYKARQFDEAIEHYNKAWELH-K-----DITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSF----- 82 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHS-C-----CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH-----
T ss_pred HHHHhccHHHHHHHHHHHHHhh-c-----cHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHH-----
Confidence 4445555 7888888888876 3 336777888888888888888888888877666531 111
Q ss_pred CcCcHHHHHH-----HHHHhhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Q 047433 361 PKNLGEAITR-----ALLLDYKLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFW 435 (614)
Q Consensus 361 ~k~lGe~it~-----aLl~dy~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk 435 (614)
..+|..+.. .-...|........+......+....+.. +..++.. .. .+..+..+...|..++.
T Consensus 83 -~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~-~~~~~~~--~~-------~~~~~~~~~~~~~~~~~ 151 (258)
T 3uq3_A 83 -ARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKEL-KKAEAEA--YV-------NPEKAEEARLEGKEYFT 151 (258)
T ss_dssp -HHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HHHHHHH--HC-------CHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHH-HHHHHHH--Hc-------CcchHHHHHHHHHHHHH
Confidence 111111110 00012222212122233333333322222 1111111 22 23356689999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCH
Q 047433 436 LGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLG 515 (614)
Q Consensus 436 ~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~y 515 (614)
.|+|++|+..|+++++..|.+ ..++.++|.+|..+|++++|+..++++++++|+ +..+++.+|.++..+|++
T Consensus 152 ~~~~~~A~~~~~~a~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~~~l~~~~~~~g~~ 223 (258)
T 3uq3_A 152 KSDWPNAVKAYTEMIKRAPED-----ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN---FVRAYIRKATAQIAVKEY 223 (258)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCH
T ss_pred hcCHHHHHHHHHHHHhcCccc-----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHH---HHHHHHHHHHHHHHHhhH
Confidence 999999999999999999999 999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHHcC
Q 047433 516 RESLMDCIMFINGC 529 (614)
Q Consensus 516 eEAL~df~kALkl~ 529 (614)
++|+..|++++++.
T Consensus 224 ~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 224 ASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999998
No 19
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.52 E-value=2.9e-13 Score=126.81 Aligned_cols=112 Identities=23% Similarity=0.184 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcch-----------hHHHHHHHHHHHHHcCCcHHHHHHHH
Q 047433 418 EMRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNE-----------RMVLYSNRAQCHLLLREPDAAISDAT 486 (614)
Q Consensus 418 ~~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~-----------~a~lysNRA~~ylkLGdyeeAI~D~~ 486 (614)
+....+..+...|+.++..|+|++|+..|.+++++.|.+.... ...++.|+|.+|+++|+|++|+.+++
T Consensus 33 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 112 (198)
T 2fbn_A 33 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 112 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3456788999999999999999999999999999999872111 13899999999999999999999999
Q ss_pred HHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 487 RALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 487 ~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
++++++|. +.++++++|.++..+|++++|+..|++++++.|++
T Consensus 113 ~al~~~p~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 155 (198)
T 2fbn_A 113 KVLKIDKN---NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNN 155 (198)
T ss_dssp HHHHHSTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHhCcc---cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 99999999 99999999999999999999999999999999853
No 20
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.52 E-value=3e-13 Score=139.54 Aligned_cols=111 Identities=22% Similarity=0.189 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC----------cchhHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Q 047433 420 RVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRP----------KNERMVLYSNRAQCHLLLREPDAAISDATRAL 489 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~----------~~~~a~lysNRA~~ylkLGdyeeAI~D~~~AL 489 (614)
+..+..+...|+.+++.|+|++|+..|++||++.|.+. ......+|.|+|.||+++|+|++|+..|++||
T Consensus 144 p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 223 (336)
T 1p5q_A 144 LEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKAL 223 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34667899999999999999999999999999999862 12335899999999999999999999999999
Q ss_pred hcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 490 CLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 490 eLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
+++|+ +.++|+++|.+|..+|++++|+.+|++++++.|++.
T Consensus 224 ~~~p~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 264 (336)
T 1p5q_A 224 ELDSN---NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 264 (336)
T ss_dssp HHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred HhCCC---cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
Confidence 99999 999999999999999999999999999999999644
No 21
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.51 E-value=4.3e-13 Score=122.83 Aligned_cols=101 Identities=15% Similarity=0.065 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..++..++++.|+..+.+++.+.|.+ ..++.++|.+|.++|++++|+..++++++++|. +..+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~---~~~~ 143 (184)
T 3vtx_A 72 SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVY-----ADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPG---FIRA 143 (184)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-----hHHHHHHHHHHHHhCCchhHHHHHHHHHHhcch---hhhH
Confidence 34467888999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
|+.+|.+|..+|++++|+..|+++++++|
T Consensus 144 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p 172 (184)
T 3vtx_A 144 YQSIGLAYEGKGLRDEAVKYFKKALEKEE 172 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999977
No 22
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.51 E-value=2.6e-14 Score=147.79 Aligned_cols=144 Identities=18% Similarity=0.081 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC------------cchhHHHHHHHHHHHHHcCCcHHHHHHHH
Q 047433 419 MRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRP------------KNERMVLYSNRAQCHLLLREPDAAISDAT 486 (614)
Q Consensus 419 ~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~------------~~~~a~lysNRA~~ylkLGdyeeAI~D~~ 486 (614)
++..+..++..|+.+++.|+|++|+..|++||.+.|.+. ......+|.|+|.||+++|+|++|+.+|+
T Consensus 175 ~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~ 254 (338)
T 2if4_A 175 RIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCN 254 (338)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 345677899999999999999999999999999999761 00011489999999999999999999999
Q ss_pred HHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcC
Q 047433 487 RALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKI 566 (614)
Q Consensus 487 ~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~ 566 (614)
+||+++|+ +.++|+++|.+|..+|++++|+.+|++++++.|++... ...+.....+.......+...|.+++...
T Consensus 255 ~al~~~p~---~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a--~~~L~~l~~~~~~~~~~a~~~~~~~l~~~ 329 (338)
T 2if4_A 255 IVLTEEEK---NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAI--RRELRALAEQEKALYQKQKEMYKGIFKGK 329 (338)
T ss_dssp HHHHHCTT---CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------------------------------
T ss_pred HHHHhCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999 99999999999999999999999999999999864432 33333222222222233345566665554
Q ss_pred C
Q 047433 567 L 567 (614)
Q Consensus 567 ~ 567 (614)
+
T Consensus 330 p 330 (338)
T 2if4_A 330 D 330 (338)
T ss_dssp -
T ss_pred C
Confidence 3
No 23
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.51 E-value=3.9e-13 Score=116.70 Aligned_cols=102 Identities=25% Similarity=0.266 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..++..|+|++|+..|++++.++|.+ ..++.++|.+++.+|++++|+..++++++++|. +..+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~---~~~~ 79 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV-----AVYYTNRALCYLKMQQPEQALADCRRALELDGQ---SVKA 79 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch---hHHH
Confidence 46689999999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
++.+|.++..+|++++|+..|++++++.|+
T Consensus 80 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 80 HFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 999999999999999999999999999885
No 24
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.50 E-value=9.6e-13 Score=132.80 Aligned_cols=228 Identities=12% Similarity=0.003 Sum_probs=149.0
Q ss_pred hhcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhh--------hccC
Q 047433 290 CYSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELN--------SLLD 359 (614)
Q Consensus 290 ~~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~--------~Lg~ 359 (614)
++...|+ +|+..++++++..|+.+ ..+..++.++..+++.+.+...+.+++..-++..... .+|.
T Consensus 74 ~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 148 (365)
T 4eqf_A 74 KRLKEGDLPVTILFMEAAILQDPGDA-----EAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSH 148 (365)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCHHHHHHHHHHHHHhCcCCH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHcccc
Confidence 3444554 78888899998887766 6788888888888888888888888877665544332 1111
Q ss_pred CCcCcHHHHHHHHHHhhhhhhhccCc---HHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH--HHHHHHHHHHHHH
Q 047433 360 RPKNLGEAITRALLLDYKLTEQKFKN---KKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRV--LVGLIKQEAKHLF 434 (614)
Q Consensus 360 ~~k~lGe~it~aLl~dy~~~~~~p~n---~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~--~A~~lK~~GN~lF 434 (614)
. ...-+.+.+++............. ......+..+.... .+.+... ..-.+-+...+. .+..+...|..++
T Consensus 149 ~-~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~--~~~~~al~~~p~~~~~~~~~~l~~~~~ 224 (365)
T 4eqf_A 149 Q-QDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDS-SVLEGVK--ELYLEAAHQNGDMIDPDLQTGLGVLFH 224 (365)
T ss_dssp H-HHHHHHHHHHHHHCHHHHCC-------------------CC-HHHHHHH--HHHHHHHHHSCSSCCHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhh-hhHHHHH--HHHHHHHHhCcCccCHHHHHHHHHHHH
Confidence 1 111111112221111100000000 00000000000000 0000000 000011111111 3557888999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCC
Q 047433 435 WLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGL 514 (614)
Q Consensus 435 k~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~ 514 (614)
..|++++|+..|.+++++.|.+ +.++.++|.+|..+|++++|+..++++++++|+ +..+++.+|.+|..+|+
T Consensus 225 ~~g~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~~g~ 296 (365)
T 4eqf_A 225 LSGEFNRAIDAFNAALTVRPED-----YSLWNRLGATLANGDRSEEAVEAYTRALEIQPG---FIRSRYNLGISCINLGA 296 (365)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHTC
T ss_pred HCCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---chHHHHHHHHHHHHCCC
Confidence 9999999999999999999999 999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCC
Q 047433 515 GRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 515 yeEAL~df~kALkl~P~~~D 534 (614)
+++|+..|++++++.|+..+
T Consensus 297 ~~~A~~~~~~al~~~~~~~~ 316 (365)
T 4eqf_A 297 YREAVSNFLTALSLQRKSRN 316 (365)
T ss_dssp CHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHhCcccCC
Confidence 99999999999999987554
No 25
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.49 E-value=3.3e-12 Score=125.74 Aligned_cols=196 Identities=16% Similarity=0.161 Sum_probs=108.8
Q ss_pred cccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHHHHH
Q 047433 292 SKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLGEAIT 369 (614)
Q Consensus 292 ~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe~it 369 (614)
...|+ +|+..+.++++..|+-. ..+..++.++..+++.+.+...+.+++...++..... ..+|..+.
T Consensus 14 ~~~g~~~~A~~~~~~~l~~~p~~~-----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~------~~l~~~~~ 82 (359)
T 3ieg_A 14 LAAGQLADALSQFHAAVDGDPDNY-----IAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAAR------LQRGHLLL 82 (359)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH------HHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhhCcccH-----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHH------HHHHHHHH
Confidence 34454 68888888888777655 6677777777888888888888877776655443332 11111111
Q ss_pred HH-----HHHhhhhhhh-cc---CcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Q 047433 370 RA-----LLLDYKLTEQ-KF---KNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIE 440 (614)
Q Consensus 370 ~a-----Ll~dy~~~~~-~p---~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~Gdye 440 (614)
.. -...|..... .| .+......+.. ......+...|..++..|+++
T Consensus 83 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~-------------------------~~~~~~~~~~a~~~~~~~~~~ 137 (359)
T 3ieg_A 83 KQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVK-------------------------ADEMQRLRSQALDAFDGADYT 137 (359)
T ss_dssp HHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHTTCHH
T ss_pred HcCChHHHHHHHHHHHhcCCcccChHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHccCHH
Confidence 00 0011111111 11 11111111111 112223444556666666666
Q ss_pred HHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHH
Q 047433 441 EAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLM 520 (614)
Q Consensus 441 eAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~ 520 (614)
+|+..|.++++..|.+ ..++.++|.++..+|++++|+..++++++++|. +..+++.+|.++..+|++++|+.
T Consensus 138 ~A~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~~~la~~~~~~~~~~~A~~ 209 (359)
T 3ieg_A 138 AAITFLDKILEVCVWD-----AELRELRAECFIKEGEPRKAISDLKAASKLKSD---NTEAFYKISTLYYQLGDHELSLS 209 (359)
T ss_dssp HHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSC---CHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHhCCCc-----hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHcCCHHHHHH
Confidence 6666666666666665 566666666666666666666666666666666 66666666666666666666666
Q ss_pred HHHHHHHcCCC
Q 047433 521 DCIMFINGCIR 531 (614)
Q Consensus 521 df~kALkl~P~ 531 (614)
.|+++++..|+
T Consensus 210 ~~~~a~~~~~~ 220 (359)
T 3ieg_A 210 EVRECLKLDQD 220 (359)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHhhCcc
Confidence 66666666553
No 26
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.49 E-value=1.7e-13 Score=124.80 Aligned_cols=103 Identities=11% Similarity=-0.152 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|+.+++.|+|++|+..|+++|+++|++ +.+|.++|.+|.++|++++|+..++++++++|+ +..+
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---~~~~ 101 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD-----PKAHRFLGLLYELEENTDKAVECYRRSVELNPT---QKDL 101 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC---CHHH
Confidence 45577889999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHH-HHHHHHcCCCC
Q 047433 502 LWRRSQAYDMKGLGRESLMD-CIMFINGCIRS 532 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~d-f~kALkl~P~~ 532 (614)
|+++|.+|..+|++++|... ++++++++|++
T Consensus 102 ~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~ 133 (150)
T 4ga2_A 102 VLKIAELLCKNDVTDGRAKYWVERAAKLFPGS 133 (150)
T ss_dssp HHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHhCcCC
Confidence 99999999999999988876 58999999953
No 27
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.49 E-value=7.7e-14 Score=148.09 Aligned_cols=141 Identities=14% Similarity=0.099 Sum_probs=104.8
Q ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCCCcch
Q 047433 382 KFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGE-IEEAAMKYTEALGVCPSRPKNE 460 (614)
Q Consensus 382 ~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~Gd-yeeAI~~YtkAIel~P~~~~~~ 460 (614)
.|.+.++...+..+.... ++.+... .....-+...+..+..+..+|..+...|+ +++|+..|+++|+++|++
T Consensus 93 ~p~~~~a~~~lg~~~~~~-g~~~~Al--~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~---- 165 (382)
T 2h6f_A 93 SDKFRDVYDYFRAVLQRD-ERSERAF--KLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKN---- 165 (382)
T ss_dssp CHHHHHHHHHHHHHHHHT-CCCHHHH--HHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC----
T ss_pred ChhhHHHHHHHHHHHHHC-CChHHHH--HHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCC----
Confidence 455555555444443322 1122222 33334444455567788888888888886 888888888888888888
Q ss_pred hHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 461 RMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 461 ~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
..+|+|||.++..+|++++|+.++++||+++|+ +..+|+.+|.++..+|++++|+.+|+++++++|++.
T Consensus 166 -~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~---~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~ 234 (382)
T 2h6f_A 166 -YQVWHHRRVLVEWLRDPSQELEFIADILNQDAK---NYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN 234 (382)
T ss_dssp -HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred -HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc---CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH
Confidence 888888888888888888888888888888888 888888888888888888888888888888888543
No 28
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.48 E-value=2.9e-12 Score=128.23 Aligned_cols=226 Identities=12% Similarity=-0.028 Sum_probs=150.1
Q ss_pred HHHhhhcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcC
Q 047433 286 IRILCYSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKN 363 (614)
Q Consensus 286 ~~~~~~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~ 363 (614)
.+-.++...|+ +|+..+.++++..|+.+ ..+..++.++..+++.+.+...+.+++...++..... ..
T Consensus 69 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~------~~ 137 (368)
T 1fch_A 69 EEGLRRLQEGDLPNAVLLFEAAVQQDPKHM-----EAWQYLGTTQAENEQELLAISALRRCLELKPDNQTAL------MA 137 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHSCTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH------HH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHH------HH
Confidence 33444555565 78888888888777655 6677777788888888888888877776655543332 11
Q ss_pred cHHHHHH-----HHHHhhhhhhh-ccCcHHHHH----------------HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 047433 364 LGEAITR-----ALLLDYKLTEQ-KFKNKKVQK----------------ALEEIWELKVERRKREKMMMMSEEKVEEMRV 421 (614)
Q Consensus 364 lGe~it~-----aLl~dy~~~~~-~p~n~e~~~----------------aL~el~~lkvEr~erEk~~~ls~eel~~~~~ 421 (614)
+|..+.. .-...|..... .|.+..... .+..+.... +.+... ..-..-+...+.
T Consensus 138 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~A~--~~~~~a~~~~p~ 213 (368)
T 1fch_A 138 LAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDS--LFLEVK--ELFLAAVRLDPT 213 (368)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHH--HHHHHH--HHHHHHHHHSTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcc--cHHHHH--HHHHHHHHhCcC
Confidence 1111110 00011111111 111110000 011111000 111111 111111111222
Q ss_pred --HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccH
Q 047433 422 --LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHC 499 (614)
Q Consensus 422 --~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~ 499 (614)
.+..+...|..++..|++++|+..|.+++++.|.+ +.++.++|.++..+|++++|+..++++++++|. +.
T Consensus 214 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~---~~ 285 (368)
T 1fch_A 214 SIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND-----YLLWNKLGATLANGNQSEEAVAAYRRALELQPG---YI 285 (368)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cH
Confidence 35678899999999999999999999999999999 999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 500 KSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 500 KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
.+++.+|.++..+|++++|+..|++++++.|+..+
T Consensus 286 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 320 (368)
T 1fch_A 286 RSRYNLGISCINLGAHREAVEHFLEALNMQRKSRG 320 (368)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999886633
No 29
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.48 E-value=8.8e-13 Score=126.54 Aligned_cols=198 Identities=15% Similarity=0.033 Sum_probs=117.8
Q ss_pred hhhcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHH
Q 047433 289 LCYSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLGE 366 (614)
Q Consensus 289 ~~~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe 366 (614)
.++...|+ +|+..++++|+..|+.+ ..+..++.++..+++.+.....+++++..-|+..+.. ..+|.
T Consensus 13 ~~~~~~g~~~~A~~~~~~al~~~p~~~-----~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~------~~lg~ 81 (217)
T 2pl2_A 13 VQLYALGRYDAALTLFERALKENPQDP-----EALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGY------MVLSE 81 (217)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTSSSCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH------HHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH------HHHHH
Confidence 35556676 89999999999999888 7888899999999999999999998888877665554 33333
Q ss_pred HHHHHHHHhhhhhhh-ccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 047433 367 AITRALLLDYKLTEQ-KFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIEEAAMK 445 (614)
Q Consensus 367 ~it~aLl~dy~~~~~-~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~GdyeeAI~~ 445 (614)
.+...-. .... ....+...+++..+.. . ++..+..+..+...|..++..|++++|+..
T Consensus 82 ~~~~~~~----~~~~~~~~~g~~~~A~~~~~~--------a---------l~~~P~~~~~~~~lg~~~~~~g~~~~A~~~ 140 (217)
T 2pl2_A 82 AYVALYR----QAEDRERGKGYLEQALSVLKD--------A---------ERVNPRYAPLHLQRGLVYALLGERDKAEAS 140 (217)
T ss_dssp HHHHHHH----TCSSHHHHHHHHHHHHHHHHH--------H---------HHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHhhh----hhhhhcccccCHHHHHHHHHH--------H---------HHhCcccHHHHHHHHHHHHHcCChHHHHHH
Confidence 3222200 0000 0000111111111111 1 111122344566777777777777777777
Q ss_pred HHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 047433 446 YTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMF 525 (614)
Q Consensus 446 YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kA 525 (614)
|+++++++ ++ +.++.|+|.+|..+|++++|+..++++++++|+ +..+++.+|.++..+|++++|+..|+++
T Consensus 141 ~~~al~~~-~~-----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~---~~~~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 141 LKQALALE-DT-----PEIRSALAELYLSMGRLDEALAQYAKALEQAPK---DLDLRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp HHHHHHHC-CC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT---CHHHHHHHHHHHTC--------------
T ss_pred HHHHHhcc-cc-----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---ChHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 77777777 66 777777777777777777777777777777777 7777777777777777777777777665
Q ss_pred HH
Q 047433 526 IN 527 (614)
Q Consensus 526 Lk 527 (614)
-.
T Consensus 212 ~~ 213 (217)
T 2pl2_A 212 HH 213 (217)
T ss_dssp --
T ss_pred hh
Confidence 43
No 30
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.47 E-value=3e-12 Score=113.48 Aligned_cols=106 Identities=25% Similarity=0.262 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccH
Q 047433 420 RVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHC 499 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~ 499 (614)
...+..+...|..++..|+|++|+..|.++++..|.+ ..++.++|.++..+|+|++|+..++++++++|. +.
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~---~~ 81 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN-----AIYYGNRSLAYLRTECYGYALGDATRAIELDKK---YI 81 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc---cH
Confidence 3477889999999999999999999999999999999 999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 500 KSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 500 KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
.+++.+|.++..+|++++|+..|++++++.|++.
T Consensus 82 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~ 115 (166)
T 1a17_A 82 KGYYRRAASNMALGKFRAALRDYETVVKVKPHDK 115 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999988533
No 31
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.46 E-value=4.8e-13 Score=140.86 Aligned_cols=105 Identities=21% Similarity=0.229 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh----------------hCCCCCcchhHHHHHHHHHHHHHcCCcHHHH
Q 047433 419 MRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALG----------------VCPSRPKNERMVLYSNRAQCHLLLREPDAAI 482 (614)
Q Consensus 419 ~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIe----------------l~P~~~~~~~a~lysNRA~~ylkLGdyeeAI 482 (614)
....+..++..|+.+++.|+|++|+..|++||+ +.|.. ..+|.|+|.||+++|+|++|+
T Consensus 219 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~-----~~~~~nla~~~~~~g~~~~A~ 293 (370)
T 1ihg_A 219 ILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVA-----LSCVLNIGACKLKMSDWQGAV 293 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHH-----HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHH-----HHHHHHHHHHHHhccCHHHHH
Confidence 344677899999999999999999999999999 45555 899999999999999999999
Q ss_pred HHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 483 SDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 483 ~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
.++++||+++|+ +.++|+++|.+|..+|++++|+.+|++++++.|+
T Consensus 294 ~~~~~al~~~p~---~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~ 339 (370)
T 1ihg_A 294 DSCLEALEIDPS---NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPE 339 (370)
T ss_dssp HHHHHHHTTCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhCch---hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 999999999999 9999999999999999999999999999999985
No 32
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.46 E-value=7e-12 Score=129.25 Aligned_cols=198 Identities=17% Similarity=0.172 Sum_probs=117.6
Q ss_pred hhcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHHH
Q 047433 290 CYSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLGEA 367 (614)
Q Consensus 290 ~~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe~ 367 (614)
++...|+ +|+..+.++++..|+.+ ..+..++.++..+++.+.+...+.+++...++..... ..+|..
T Consensus 35 ~~~~~g~~~~A~~~~~~~l~~~p~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~------~~l~~~ 103 (450)
T 2y4t_A 35 KLLAAGQLADALSQFHAAVDGDPDNY-----IAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAAR------LQRGHL 103 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH------HHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCccH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHH------HHHHHH
Confidence 3444555 78889999998877655 6777788888888888888888888877665544333 111111
Q ss_pred HHH-----HHHHhhhhhhh-ccCcH---HHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 047433 368 ITR-----ALLLDYKLTEQ-KFKNK---KVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGE 438 (614)
Q Consensus 368 it~-----aLl~dy~~~~~-~p~n~---e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~Gd 438 (614)
+.. .....|..... .|.+. .....+.. ......+...|..++..|+
T Consensus 104 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~-------------------------~~~~~~~~~~a~~~~~~~~ 158 (450)
T 2y4t_A 104 LLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIK-------------------------SDEMQRLRSQALNAFGSGD 158 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHTC
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHcCC
Confidence 110 00011111111 22222 11111111 1122234555666666666
Q ss_pred HHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHH
Q 047433 439 IEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRES 518 (614)
Q Consensus 439 yeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEA 518 (614)
+++|+..|+++++..|.+ ..++.++|.+|.++|++++|+..++++++++|. +..+++.+|.++..+|++++|
T Consensus 159 ~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~---~~~~~~~l~~~~~~~g~~~~A 230 (450)
T 2y4t_A 159 YTAAIAFLDKILEVCVWD-----AELRELRAECFIKEGEPRKAISDLKAASKLKND---NTEAFYKISTLYYQLGDHELS 230 (450)
T ss_dssp HHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCS---CHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCCC-----hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHcCCHHHH
Confidence 666666666666666666 666666666666666666666666666666666 666666666666666666666
Q ss_pred HHHHHHHHHcCCC
Q 047433 519 LMDCIMFINGCIR 531 (614)
Q Consensus 519 L~df~kALkl~P~ 531 (614)
+..|+++++..|+
T Consensus 231 ~~~~~~~~~~~p~ 243 (450)
T 2y4t_A 231 LSEVRECLKLDQD 243 (450)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCC
Confidence 6666666666664
No 33
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.46 E-value=4.5e-13 Score=118.16 Aligned_cols=100 Identities=12% Similarity=0.022 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWR 504 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyR 504 (614)
.+...|..++..|++++|+..|.++++++|++ +.+|.++|.++..+|++++|+..+++|++++|+ +..+++.
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~-----~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~---~~~~~~~ 90 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPER-----EEAWRSLGLTQAENEKDGLAIIALNHARMLDPK---DIAVHAA 90 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHH
Confidence 46778999999999999999999999999999 999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 505 RSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 505 RA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
+|.++..+|++++|+..|++++++.|++
T Consensus 91 la~~~~~~g~~~~A~~~~~~al~~~P~~ 118 (121)
T 1hxi_A 91 LAVSHTNEHNANAALASLRAWLLSQPQY 118 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 9999999999999999999999998853
No 34
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.45 E-value=1.7e-13 Score=137.55 Aligned_cols=102 Identities=25% Similarity=0.273 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|+.++..|+|++|+..|+++|+++|.+ +.+|.|+|.+|.++|+|++|+.++++|++++|+ +.+++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~ 75 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV-----AVYYTNRALCYLKMQQPEQALADCRRALELDGQ---SVKAH 75 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---CHHHH
Confidence 5578999999999999999999999999999999 999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
+++|.+|..+|++++|+..|++++++.|++
T Consensus 76 ~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 76 FFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999999998854
No 35
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.45 E-value=4e-12 Score=125.15 Aligned_cols=278 Identities=10% Similarity=-0.009 Sum_probs=183.2
Q ss_pred HHHhhhcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhh---chhhhhhccCC
Q 047433 286 IRILCYSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLI---DLVELNSLLDR 360 (614)
Q Consensus 286 ~~~~~~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLv---DLseL~~Lg~~ 360 (614)
.+-.|+...|+ +|+..+.++++..|+.. ..+..++.++...++.+.+...+.++....+ +.....
T Consensus 42 ~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~----- 111 (359)
T 3ieg_A 42 RRATVFLAMGKSKAALPDLTKVIALKMDFT-----AARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAE----- 111 (359)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHH-----
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCcc-----hHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHH-----
Confidence 34456667776 89999999999988766 7788889999999999999998888876655 333332
Q ss_pred CcCcHHHHHHHHHHhhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Q 047433 361 PKNLGEAITRALLLDYKLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIE 440 (614)
Q Consensus 361 ~k~lGe~it~aLl~dy~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~Gdye 440 (614)
..++...... ..+.........+....++..+.... . ..+..+..+...|..++..|+++
T Consensus 112 -~~l~~~~~~~--~~~~~a~~~~~~~~~~~A~~~~~~~~----------~-------~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3ieg_A 112 -SQLVKADEMQ--RLRSQALDAFDGADYTAAITFLDKIL----------E-------VCVWDAELRELRAECFIKEGEPR 171 (359)
T ss_dssp -HHHHHHHHHH--HHHHHHHHHHHTTCHHHHHHHHHHHH----------H-------HCTTCHHHHHHHHHHHHHTTCHH
T ss_pred -HHHHHHHHHH--HHHHHHHHHHHccCHHHHHHHHHHHH----------H-------hCCCchHHHHHHHHHHHHCCCHH
Confidence 1111110000 00000000000111112222221111 0 11123456888999999999999
Q ss_pred HHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHH------------HHHHH
Q 047433 441 EAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLW------------RRSQA 508 (614)
Q Consensus 441 eAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyy------------RRA~A 508 (614)
+|+..|.++++..|.+ ..++.++|.++..+|++++|+..++++++++|+ +..++. .+|.+
T Consensus 172 ~A~~~~~~~~~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~ 243 (359)
T 3ieg_A 172 KAISDLKAASKLKSDN-----TEAFYKISTLYYQLGDHELSLSEVRECLKLDQD---HKRCFAHYKQVKKLNKLIESAEE 243 (359)
T ss_dssp HHHHHHHHHHTTCSCC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc---chHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 899999999999999999999999999999999 666543 55888
Q ss_pred HHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHH---HHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCcCCcccch
Q 047433 509 YDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPY---YAARMISKHMNALWVFGGARSKILSSPVNNVQESYGENKSGI 585 (614)
Q Consensus 509 l~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~---y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~~e~~~~~~~g~ 585 (614)
+...|++++|+..|+++++..|++ +......-. ......++..++...|..++...+..+.............+.
T Consensus 244 ~~~~~~~~~A~~~~~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 321 (359)
T 3ieg_A 244 LIRDGRYTDATSKYESVMKTEPSV--AEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEM 321 (359)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCSS--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCc--hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCC
Confidence 999999999999999999998852 221111100 111122333455667777777655544444444445556677
Q ss_pred hhhHHHHHHHHHHhcccc
Q 047433 586 EEQRYCDMIRTMMEKKNL 603 (614)
Q Consensus 586 ~eQ~~dD~iral~~~~~~ 603 (614)
.+++...+.+++...|+.
T Consensus 322 ~~~A~~~~~~a~~~~p~~ 339 (359)
T 3ieg_A 322 YDEAIQDYEAAQEHNEND 339 (359)
T ss_dssp HHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHHhcCCCC
Confidence 777777888888777764
No 36
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.44 E-value=1.9e-12 Score=107.48 Aligned_cols=102 Identities=22% Similarity=0.226 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..++..|+|++|+..|.+++...|.+ ..++.++|.++..+|++++|+..++++++++|. +..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~ 74 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN-----HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD---WGKG 74 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc-----HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc---cHHH
Confidence 45688999999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
++.+|.++..+|++++|+..|+++++..|+
T Consensus 75 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 104 (118)
T 1elw_A 75 YSRKAAALEFLNRFEEAKRTYEEGLKHEAN 104 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999885
No 37
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.43 E-value=1.4e-13 Score=146.13 Aligned_cols=149 Identities=10% Similarity=-0.007 Sum_probs=116.1
Q ss_pred Hhhhhhhh-ccCcHHHHHHHHHHHHHHHHH-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 047433 374 LDYKLTEQ-KFKNKKVQKALEEIWELKVER-RKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALG 451 (614)
Q Consensus 374 ~dy~~~~~-~p~n~e~~~aL~el~~lkvEr-~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIe 451 (614)
..|.+... .|.+..+...+..+.... .+ .+.+. .....-+...+..+..|..+|..+...|+|++|+..|+++|+
T Consensus 118 ~~~~~al~l~P~~~~a~~~~g~~l~~~-g~d~~eAl--~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ 194 (382)
T 2h6f_A 118 KLTRDAIELNAANYTVWHFRRVLLKSL-QKDLHEEM--NYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILN 194 (382)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHT-TCCHHHHH--HHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HHHHHHHHhCccCHHHHHHHHHHHHHc-ccCHHHHH--HHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 34444444 677777776666554432 11 22233 334444555566778899999999999999999999999999
Q ss_pred hCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHH-cCCHHHH-----HHHHHHH
Q 047433 452 VCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDM-KGLGRES-----LMDCIMF 525 (614)
Q Consensus 452 l~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~-LG~yeEA-----L~df~kA 525 (614)
++|.+ ..+|+|||.++..+|++++|+.+++++|+++|. +..+|+.+|.++.. .|.+++| +..|+++
T Consensus 195 ldP~~-----~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~---~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~A 266 (382)
T 2h6f_A 195 QDAKN-----YHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVR---NNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEM 266 (382)
T ss_dssp HCTTC-----HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHH
T ss_pred hCccC-----HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 99999 999999999999999999999999999999999 99999999999999 5555888 5889999
Q ss_pred HHcCCCCC
Q 047433 526 INGCIRSE 533 (614)
Q Consensus 526 Lkl~P~~~ 533 (614)
++++|++.
T Consensus 267 l~l~P~~~ 274 (382)
T 2h6f_A 267 IKLVPHNE 274 (382)
T ss_dssp HHHSTTCH
T ss_pred HHHCCCCH
Confidence 99988543
No 38
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.42 E-value=2.1e-11 Score=119.09 Aligned_cols=250 Identities=10% Similarity=-0.122 Sum_probs=151.7
Q ss_pred hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhc-cCCCcCcHHHHHHHHHHh
Q 047433 297 KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSL-LDRPKNLGEAITRALLLD 375 (614)
Q Consensus 297 ~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~L-g~~~k~lGe~it~aLl~d 375 (614)
+|+..++++++..|+-. ..+......+..+++.+.....+.+++...++..+.... +.-....|..+..++ ..
T Consensus 40 ~A~~~~~~~l~~~p~~~-----~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~-~~ 113 (330)
T 3hym_B 40 MCYKLTSVVMEKDPFHA-----SCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHAR-RY 113 (330)
T ss_dssp HHHHHHHHHHHHCTTCT-----TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHH-HH
T ss_pred HHHHHHHHHHHcCCCCh-----hhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHH-HH
Confidence 67777777777766543 233333344456677777777777776655544333200 000000000011111 12
Q ss_pred hhhhhh-ccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 047433 376 YKLTEQ-KFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCP 454 (614)
Q Consensus 376 y~~~~~-~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P 454 (614)
|..... .|.+..+...+..+.... .+.+... ..-...+...+.....+...|..++..|++++|+..|+++++..|
T Consensus 114 ~~~a~~~~~~~~~~~~~l~~~~~~~-~~~~~A~--~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~ 190 (330)
T 3hym_B 114 LSKATTLEKTYGPAWIAYGHSFAVE-SEHDQAM--AAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAP 190 (330)
T ss_dssp HHHHHTTCTTCTHHHHHHHHHHHHH-TCHHHHH--HHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHc-cCHHHHH--HHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCC
Confidence 222222 344444443333322211 0111111 111111111122334577799999999999999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcC---------CCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 047433 455 SRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLS---------NPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMF 525 (614)
Q Consensus 455 ~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLd---------P~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kA 525 (614)
.+ ..++.++|.++..+|++++|+..+++++++. |. +..+++.+|.++..+|++++|+..|+++
T Consensus 191 ~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~la~~~~~~g~~~~A~~~~~~a 262 (330)
T 3hym_B 191 ED-----PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK---WEPLLNNLGHVCRKLKKYAEALDYHRQA 262 (330)
T ss_dssp TC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT---CCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CC-----hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH---HHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99 9999999999999999999999999999987 55 6789999999999999999999999999
Q ss_pred HHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcC
Q 047433 526 INGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKI 566 (614)
Q Consensus 526 Lkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~ 566 (614)
+++.|++... ...+. ......++..++...|.+++...
T Consensus 263 ~~~~~~~~~~--~~~la-~~~~~~g~~~~A~~~~~~al~~~ 300 (330)
T 3hym_B 263 LVLIPQNAST--YSAIG-YIHSLMGNFENAVDYFHTALGLR 300 (330)
T ss_dssp HHHSTTCSHH--HHHHH-HHHHHHTCHHHHHHHHHTTTTTC
T ss_pred HhhCccchHH--HHHHH-HHHHHhccHHHHHHHHHHHHccC
Confidence 9998864332 22222 11222333345556666665544
No 39
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.42 E-value=6.3e-13 Score=152.40 Aligned_cols=107 Identities=18% Similarity=0.128 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccH
Q 047433 420 RVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHC 499 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~ 499 (614)
+..+..+.+.|+.+.+.|++++|+..|++||+++|++ +.+|.|+|.+|.++|++++|+..+++|++++|+ +.
T Consensus 40 P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~-----~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~---~~ 111 (723)
T 4gyw_A 40 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF-----ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPA---FA 111 (723)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CH
Confidence 3456789999999999999999999999999999999 999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 500 KSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 500 KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
.+|+++|.+|..+|++++|+..|+++++++|++.+
T Consensus 112 ~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~ 146 (723)
T 4gyw_A 112 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPD 146 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH
Confidence 99999999999999999999999999999996443
No 40
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.41 E-value=3.5e-12 Score=131.48 Aligned_cols=207 Identities=11% Similarity=0.014 Sum_probs=112.9
Q ss_pred HHhhhcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchh---hhhhccCCC
Q 047433 287 RILCYSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLV---ELNSLLDRP 361 (614)
Q Consensus 287 ~~~~~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLs---eL~~Lg~~~ 361 (614)
+..|+...|+ +|+..++++++..|+.. ..+..++.++..+++.+.+...+.++....++.. ...
T Consensus 66 l~~~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~------ 134 (450)
T 2y4t_A 66 RATVFLAMGKSKAALPDLTKVIQLKMDFT-----AARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQ------ 134 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHH------
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCCcH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHH------
Confidence 3456667776 79999999999988876 7888899999999999999998888876555433 221
Q ss_pred cCcHHHHHHHHHHhhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Q 047433 362 KNLGEAITRALLLDYKLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIEE 441 (614)
Q Consensus 362 k~lGe~it~aLl~dy~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~Gdyee 441 (614)
..++...... ..+.........+....++..+.... . ..+..+..+...|..++..|++++
T Consensus 135 ~~l~~~~~~~--~~~~~a~~~~~~~~~~~A~~~~~~~~----------~-------~~~~~~~~~~~l~~~~~~~g~~~~ 195 (450)
T 2y4t_A 135 SQLIKSDEMQ--RLRSQALNAFGSGDYTAAIAFLDKIL----------E-------VCVWDAELRELRAECFIKEGEPRK 195 (450)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHHTCHHHHHHHHHHHH----------H-------HCTTCHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCHHHHHHHHHHHH----------H-------hCCCChHHHHHHHHHHHHCCCHHH
Confidence 0010000000 00000000000000011111111100 0 001122345555666666666666
Q ss_pred HHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHH------------HHHH
Q 047433 442 AAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRR------------SQAY 509 (614)
Q Consensus 442 AI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRR------------A~Al 509 (614)
|+..|.++++..|.+ +.++.++|.+|..+|++++|+..++++++++|+ +...+... |.++
T Consensus 196 A~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~---~~~~~~~~~~~~~~~~~~~~~~~~ 267 (450)
T 2y4t_A 196 AISDLKAASKLKNDN-----TEAFYKISTLYYQLGDHELSLSEVRECLKLDQD---HKRCFAHYKQVKKLNKLIESAEEL 267 (450)
T ss_dssp GHHHHHHHHHHHCSC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666666655 566666666666666666666666666666665 44444333 5666
Q ss_pred HHcCCHHHHHHHHHHHHHcCCC
Q 047433 510 DMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 510 ~~LG~yeEAL~df~kALkl~P~ 531 (614)
...|++++|+..|+++++..|+
T Consensus 268 ~~~g~~~~A~~~~~~~l~~~p~ 289 (450)
T 2y4t_A 268 IRDGRYTDATSKYESVMKTEPS 289 (450)
T ss_dssp HHHTCHHHHHHHHHHHHHHCCS
T ss_pred HHcCCHHHHHHHHHHHHhcCCc
Confidence 6666666666666666666553
No 41
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.40 E-value=6e-12 Score=123.01 Aligned_cols=225 Identities=9% Similarity=0.021 Sum_probs=147.6
Q ss_pred hhcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhcc-ChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHH
Q 047433 290 CYSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLK-DPDTRYKVIETAALFLIDLVELNSLLDRPKNLGE 366 (614)
Q Consensus 290 ~~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llk-d~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe 366 (614)
|+...|+ +|+..+.++++..|+-+ ..+..++.+....+ +.+.+...+.+++..-++..... ..+|.
T Consensus 65 ~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~------~~l~~ 133 (330)
T 3hym_B 65 TLVELNKANELFYLSHKLVDLYPSNP-----VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAW------IAYGH 133 (330)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTST-----HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHH------HHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHhCcCCH-----HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHH------HHHHH
Confidence 3345555 67888888888776655 66777777777777 77777777777766555433332 11111
Q ss_pred HHHH-----HHHHhhhhhhh-ccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Q 047433 367 AITR-----ALLLDYKLTEQ-KFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIE 440 (614)
Q Consensus 367 ~it~-----aLl~dy~~~~~-~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~Gdye 440 (614)
.+.. .....|..... .|.+......+..+.... .+.+... ..-..-+...+..+..+...|..++..|+++
T Consensus 134 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-~~~~~A~--~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~ 210 (330)
T 3hym_B 134 SFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLT-NNSKLAE--RFFSQALSIAPEDPFVMHEVGVVAFQNGEWK 210 (330)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHT-TCHHHHH--HHHHHHHTTCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-hhHHHHH--HHHHHHHHhCCCChHHHHHHHHHHHHcccHH
Confidence 1110 00012222111 233333332232221110 0001110 0000111111224567889999999999999
Q ss_pred HHHHHHHHHHhhCCCCCc----chhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHH
Q 047433 441 EAAMKYTEALGVCPSRPK----NERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGR 516 (614)
Q Consensus 441 eAI~~YtkAIel~P~~~~----~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~ye 516 (614)
+|+..|.+++++.|.... .....++.++|.+|..+|++++|+..++++++++|+ +..+++.+|.++..+|+++
T Consensus 211 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~---~~~~~~~la~~~~~~g~~~ 287 (330)
T 3hym_B 211 TAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ---NASTYSAIGYIHSLMGNFE 287 (330)
T ss_dssp HHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CSHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc---chHHHHHHHHHHHHhccHH
Confidence 999999999998733211 122789999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHcCCC
Q 047433 517 ESLMDCIMFINGCIR 531 (614)
Q Consensus 517 EAL~df~kALkl~P~ 531 (614)
+|+..|++++++.|+
T Consensus 288 ~A~~~~~~al~~~p~ 302 (330)
T 3hym_B 288 NAVDYFHTALGLRRD 302 (330)
T ss_dssp HHHHHHHTTTTTCSC
T ss_pred HHHHHHHHHHccCCC
Confidence 999999999999885
No 42
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.40 E-value=2.9e-11 Score=118.04 Aligned_cols=222 Identities=10% Similarity=0.024 Sum_probs=146.5
Q ss_pred hhhcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHH
Q 047433 289 LCYSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLGE 366 (614)
Q Consensus 289 ~~~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe 366 (614)
.++...|+ +|+..++++++..|+.. ..+..++.++...++.+.+...+.++....++..... ..+|.
T Consensus 29 ~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~------~~la~ 97 (327)
T 3cv0_A 29 LSMLKLANLAEAALAFEAVCQAAPERE-----EAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH------AALAV 97 (327)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH------HHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHH------HHHHH
Confidence 34444554 68888888888777654 5666777777788888888888877776655443332 11111
Q ss_pred HHHH-----HHHHhhhhhhh-ccCcHHHHHHH--------------HH--HHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 047433 367 AITR-----ALLLDYKLTEQ-KFKNKKVQKAL--------------EE--IWELKVERRKREKMMMMSEEKVEEMRVLVG 424 (614)
Q Consensus 367 ~it~-----aLl~dy~~~~~-~p~n~e~~~aL--------------~e--l~~lkvEr~erEk~~~ls~eel~~~~~~A~ 424 (614)
.+.. .....|..... .|.+......+ .. ..... +.+... ..-.+-+...+..+.
T Consensus 98 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~A~--~~~~~~~~~~~~~~~ 173 (327)
T 3cv0_A 98 SHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPN--EYRECR--TLLHAALEMNPNDAQ 173 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHH--HHHHHH--HHHHHHHHHSTTCHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcc--cHHHHH--HHHHHHHhhCCCCHH
Confidence 1100 00011111111 11111111110 00 00000 000000 000011111122456
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWR 504 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyR 504 (614)
.+...|..++..|++++|+..|.++++..|.+ ..++.++|.++..+|++++|+..++++++++|. +..+++.
T Consensus 174 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~ 245 (327)
T 3cv0_A 174 LHASLGVLYNLSNNYDSAAANLRRAVELRPDD-----AQLWNKLGATLANGNRPQEALDAYNRALDINPG---YVRVMYN 245 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC---CHHHHHH
Confidence 78889999999999999999999999999999 999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 505 RSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 505 RA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
+|.++..+|++++|+..|+++++..|+..
T Consensus 246 l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 274 (327)
T 3cv0_A 246 MAVSYSNMSQYDLAAKQLVRAIYMQVGGT 274 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCccc
Confidence 99999999999999999999999998643
No 43
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.39 E-value=3e-12 Score=109.06 Aligned_cols=102 Identities=25% Similarity=0.261 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..++..|+|++|+..|.++++..|.+ ..++.++|.+|..+|++++|+..++++++++|. +..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~ 86 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD-----AKLYSNRAACYTKLLEFQLALKDCEECIQLEPT---FIKG 86 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC-----HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc-----HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC---chHH
Confidence 45689999999999999999999999999999998 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
++.+|.++..+|++++|+..|+++++..|+
T Consensus 87 ~~~la~~~~~~~~~~~A~~~~~~~~~~~p~ 116 (133)
T 2lni_A 87 YTRKAAALEAMKDYTKAMDVYQKALDLDSS 116 (133)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999874
No 44
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.39 E-value=9.9e-12 Score=104.66 Aligned_cols=104 Identities=20% Similarity=0.196 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccH
Q 047433 420 RVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHC 499 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~ 499 (614)
+..+..+...|..++..|+|++|+..|.+++...|.+ ..++.++|.++..+|++++|+..+.++++++|. +.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~ 80 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN-----AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA---YS 80 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC-----HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc---CH
Confidence 4467789999999999999999999999999999998 999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 500 KSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 500 KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
.+++.+|.++..+|++++|+..|+++++..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~ 112 (131)
T 2vyi_A 81 KAYGRMGLALSSLNKHVEAVAYYKKALELDPD 112 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCcc
Confidence 99999999999999999999999999999885
No 45
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.39 E-value=1.9e-11 Score=128.70 Aligned_cols=176 Identities=10% Similarity=-0.075 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCcc
Q 047433 419 MRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSH 498 (614)
Q Consensus 419 ~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~ 498 (614)
....+..+...|..++..|++++|+..|.++++++|. ..++.++|.++..+|++++|+..++++++++|. +
T Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~---~ 309 (537)
T 3fp2_A 239 RENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPT------PNSYIFLALTLADKENSQEFFKFFQKAVDLNPE---Y 309 (537)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC------HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTT---C
T ss_pred hHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC------chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCC---C
Confidence 3445677888999999999999999999999999885 578889999999999999999999999999999 8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCc
Q 047433 499 CKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPVNNVQESY 578 (614)
Q Consensus 499 ~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~~e~~ 578 (614)
..+++.+|.++..+|++++|+..|+++++..|++.... ..+. ......++..++...|.+++...+..+........
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~--~~la-~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 386 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPY--IQLA-CLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAE 386 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHH--HHHH-HHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHH--HHHH-HHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 99999999999999999999999999999988644322 1111 11122333445566777777766554444344444
Q ss_pred CCcccchhhhHHHHHHHHHHhcccccCC
Q 047433 579 GENKSGIEEQRYCDMIRTMMEKKNLISG 606 (614)
Q Consensus 579 ~~~~~g~~eQ~~dD~iral~~~~~~~~g 606 (614)
.....+..+++...+.+++...|+...-
T Consensus 387 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 414 (537)
T 3fp2_A 387 ILTDRGDFDTAIKQYDIAKRLEEVQEKI 414 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHCSSC
T ss_pred HHHHhCCHHHHHHHHHHHHHcCCcchhh
Confidence 4455667777788888888877765443
No 46
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.37 E-value=1e-11 Score=104.88 Aligned_cols=101 Identities=12% Similarity=0.069 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCcc---
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSH--- 498 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~--- 498 (614)
.+..+...|..++..|+|++|+..|.++++..|.+ ..++.++|.+|..+|++++|+..++++++++|. +
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~ 74 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN-----MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE---NRED 74 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH---STTC
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc-----HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc---cchh
Confidence 56688999999999999999999999999999998 999999999999999999999999999999987 5
Q ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 499 ----CKSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 499 ----~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
..+++++|.++..+|++++|+..|+++++..|
T Consensus 75 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 110 (131)
T 1elr_A 75 YRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR 110 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999999999987
No 47
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=7.2e-12 Score=108.96 Aligned_cols=106 Identities=31% Similarity=0.437 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..++..|+|++|+..|+++++++|++ .....++.++|.+|..+|+|++|+..++++++++|. +..+
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~ 101 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP--QDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGG---DVKA 101 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH--HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC---CHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc---CHHH
Confidence 45678999999999999999999999999999863 344789999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
++.+|.++..+|++++|+..|++++++.|++
T Consensus 102 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 132 (148)
T 2dba_A 102 LYRRSQALEKLGRLDQAVLDLQRCVSLEPKN 132 (148)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999999998853
No 48
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.37 E-value=5.6e-12 Score=108.25 Aligned_cols=103 Identities=12% Similarity=-0.023 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCcc---HHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSH---CKS 501 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~---~KA 501 (614)
.+...|..++..|+|++|+..|.++++..|++ .....++.++|.+++++|+|++|+..++++++++|+ + ..+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~--~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~---~~~~~~~ 78 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNG--VYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPT---HDKAAGG 78 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSS--TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---STTHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCC--cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC---CcccHHH
Confidence 46778999999999999999999999999986 222379999999999999999999999999999999 7 899
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
++.+|.++..+|++++|+..|+++++..|++
T Consensus 79 ~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 79 LLKLGLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999853
No 49
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.35 E-value=5.7e-13 Score=111.26 Aligned_cols=95 Identities=23% Similarity=0.210 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCcc---
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSH--- 498 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~--- 498 (614)
.+..+...|+.++..|+|++|+..|+++++++|.+ +.++.|+|.+|..+|+|++|+.+++++++++|+ +
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~~ 74 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN-----PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTST---AEHV 74 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSS---TTSH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---ccHH
Confidence 45678999999999999999999999999999999 999999999999999999999999999999999 8
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHH
Q 047433 499 ---CKSLWRRSQAYDMKGLGRESLMDCIM 524 (614)
Q Consensus 499 ---~KAyyRRA~Al~~LG~yeEAL~df~k 524 (614)
.++++++|.++..+|++++|+..+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 75 AIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 89999999999999999888776654
No 50
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.34 E-value=1.1e-11 Score=120.50 Aligned_cols=112 Identities=13% Similarity=0.035 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..++..|+|++|+..|+++++..|.+ .....++.++|.+|+++|+|++|+..++++++++|+.+....+
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~--~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH--EWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS--TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC--cchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 45678889999999999999999999999998864 3446789999999999999999999999999998864446788
Q ss_pred HHHHHHHHHH--------cCCHHHHHHHHHHHHHcCCCCCCh
Q 047433 502 LWRRSQAYDM--------KGLGRESLMDCIMFINGCIRSETT 535 (614)
Q Consensus 502 yyRRA~Al~~--------LG~yeEAL~df~kALkl~P~~~D~ 535 (614)
++.+|.++.. +|++++|+..|+++++..|++...
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~ 133 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELV 133 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTH
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhH
Confidence 9999999999 999999999999999998876543
No 51
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.34 E-value=3.3e-11 Score=113.10 Aligned_cols=196 Identities=14% Similarity=-0.002 Sum_probs=141.0
Q ss_pred Hhhhcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcH
Q 047433 288 ILCYSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLG 365 (614)
Q Consensus 288 ~~~~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lG 365 (614)
-.++...|+ +|+..+.++++..|+.. ..+..++.++...++.+.....+.++....++...+.
T Consensus 30 a~~~~~~~~~~~A~~~~~~~l~~~~~~~-----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~---------- 94 (243)
T 2q7f_A 30 MGRGSEFGDYEKAAEAFTKAIEENKEDA-----IPYINFANLLSSVNELERALAFYDKALELDSSAATAY---------- 94 (243)
T ss_dssp ------------CCTTHHHHHTTCTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH----------
T ss_pred HHHHHHhhCHHHHHHHHHHHHHhCcccH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHH----------
Confidence 345555665 68888999999777665 6777788888888998888888887766544322221
Q ss_pred HHHHHHHHHhhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Q 047433 366 EAITRALLLDYKLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIEEAAMK 445 (614)
Q Consensus 366 e~it~aLl~dy~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~GdyeeAI~~ 445 (614)
..+...|.. .....++...+.+..... +.....+...|..++..|++++|+..
T Consensus 95 ----~~la~~~~~---~~~~~~A~~~~~~~~~~~--------------------~~~~~~~~~~a~~~~~~~~~~~A~~~ 147 (243)
T 2q7f_A 95 ----YGAGNVYVV---KEMYKEAKDMFEKALRAG--------------------MENGDLFYMLGTVLVKLEQPKLALPY 147 (243)
T ss_dssp ----HHHHHHHHH---TTCHHHHHHHHHHHHHHT--------------------CCSHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred ----HHHHHHHHH---hccHHHHHHHHHHHHHhC--------------------CCCHHHHHHHHHHHHHhccHHHHHHH
Confidence 111111111 011112222222111111 11234678899999999999999999
Q ss_pred HHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 047433 446 YTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMF 525 (614)
Q Consensus 446 YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kA 525 (614)
|.++++..|.+ ..++.++|.++.+.|++++|+..++++++++|. +..+++.+|.++..+|++++|+..|+++
T Consensus 148 ~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~~~la~~~~~~~~~~~A~~~~~~~ 219 (243)
T 2q7f_A 148 LQRAVELNEND-----TEARFQFGMCLANEGMLDEALSQFAAVTEQDPG---HADAFYNAGVTYAYKENREKALEMLDKA 219 (243)
T ss_dssp HHHHHHHCTTC-----HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred HHHHHHhCCcc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc---cHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 99999999998 999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHcCCCCC
Q 047433 526 INGCIRSE 533 (614)
Q Consensus 526 Lkl~P~~~ 533 (614)
+++.|++.
T Consensus 220 ~~~~p~~~ 227 (243)
T 2q7f_A 220 IDIQPDHM 227 (243)
T ss_dssp HHHCTTCH
T ss_pred HccCcchH
Confidence 99988543
No 52
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.33 E-value=8.9e-12 Score=135.30 Aligned_cols=105 Identities=26% Similarity=0.277 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|+.+++.|+|++|+..|++||+++|++ +.++.|+|.+|.++|+|++|+.++++|++++|+ +..+
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~---~~~~ 76 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN-----AIYYGNRSLAYLRTECYGYALGDATRAIELDKK---YIKG 76 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT---CHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---CHHH
Confidence 56678889999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
++++|.+|..+|++++|+..|++++++.|++.+
T Consensus 77 ~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~ 109 (477)
T 1wao_1 77 YYRRAASNMALGKFRAALRDYETVVKVKPHDKD 109 (477)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 999999999999999999999999999996554
No 53
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.33 E-value=1.3e-11 Score=130.05 Aligned_cols=262 Identities=8% Similarity=-0.087 Sum_probs=175.5
Q ss_pred hhHHHHHHHHHhhcccccC--CCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHHHHHHHHHH
Q 047433 297 KNIAECKQVIENLCNLSRS--SDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLGEAITRALLL 374 (614)
Q Consensus 297 ~aia~~~~~i~~lc~~srs--sd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe~it~aLl~ 374 (614)
+|+..++++++..|+-... .--..+..++.+....++.+.+...+.++...-++ .... . .+-.
T Consensus 220 ~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~-------------~-~l~~ 284 (537)
T 3fp2_A 220 KSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNSY-------------I-FLAL 284 (537)
T ss_dssp HHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHH-------------H-HHHH
T ss_pred HHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-chHH-------------H-HHHH
Confidence 6777788888776663200 00134667777888888888888888887766444 2111 1 1111
Q ss_pred hhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 047433 375 DYKLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCP 454 (614)
Q Consensus 375 dy~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P 454 (614)
.|.. .....++...+.+..... +..+..+...|..++..|+|++|+..|++++++.|
T Consensus 285 ~~~~---~~~~~~A~~~~~~~~~~~--------------------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 341 (537)
T 3fp2_A 285 TLAD---KENSQEFFKFFQKAVDLN--------------------PEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNP 341 (537)
T ss_dssp HTCC---SSCCHHHHHHHHHHHHHC--------------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHH---hcCHHHHHHHHHHHhccC--------------------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Confidence 1111 112222222222222111 11344688899999999999999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 455 SRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 455 ~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
.+ ..++.++|.++..+|++++|+..++++++++|. +..+++.+|.++..+|++++|+..|+++++..|+..+
T Consensus 342 ~~-----~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~---~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 413 (537)
T 3fp2_A 342 EN-----VYPYIQLACLLYKQGKFTESEAFFNETKLKFPT---LPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEK 413 (537)
T ss_dssp TC-----SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSS
T ss_pred CC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchh
Confidence 98 889999999999999999999999999999999 9999999999999999999999999999999876544
Q ss_pred hHhhcchHH---HHHHHH----------HHHHHHHHHHhhhhhcCCCCCCCCccCCcCCcccchhhhHHHHHHHHHHhcc
Q 047433 535 TSKRVKIPY---YAARMI----------SKHMNALWVFGGARSKILSSPVNNVQESYGENKSGIEEQRYCDMIRTMMEKK 601 (614)
Q Consensus 535 ~~~k~kl~~---y~~r~i----------~Kqmea~~lF~~Ai~k~~~~~~~~~~e~~~~~~~g~~eQ~~dD~iral~~~~ 601 (614)
.......-. ...... ++..++...|.+++...+..+.............|..+++...+.+++...|
T Consensus 414 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 493 (537)
T 3fp2_A 414 IHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPRSEQAKIGLAQLKLQMEKIDEAIELFEDSAILAR 493 (537)
T ss_dssp CSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 321111000 111122 4445667778888777655444443444455566777788888888888777
Q ss_pred ccc
Q 047433 602 NLI 604 (614)
Q Consensus 602 ~~~ 604 (614)
+..
T Consensus 494 ~~~ 496 (537)
T 3fp2_A 494 TMD 496 (537)
T ss_dssp -CH
T ss_pred CcH
Confidence 643
No 54
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.33 E-value=2.2e-11 Score=116.52 Aligned_cols=104 Identities=16% Similarity=0.063 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..++..|++++|+..|.+++++.|.+ ..++.++|.+|..+|++++|+..++++++++|. +..+
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~---~~~~ 113 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM-----PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT---YNYA 113 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CTHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc-----HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc---ccHH
Confidence 56689999999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
++.+|.++..+|++++|+..|++++++.|++.
T Consensus 114 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 114 HLNRGIALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999999999988543
No 55
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.32 E-value=2.1e-11 Score=121.94 Aligned_cols=170 Identities=14% Similarity=0.009 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHH
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLW 503 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyy 503 (614)
..+...|..++..|+|++|+..|+++++.+|.+ ..++.++|.+|..+|++++|+..++++++++|+ +..+++
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~---~~~~~~ 136 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH-----MEAWQYLGTTQAENEQELLAISALRRCLELKPD---NQTALM 136 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCC---CHHHHH
Confidence 357789999999999999999999999999999 999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhc--------------chHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 047433 504 RRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRV--------------KIPYYAARMISKHMNALWVFGGARSKILSS 569 (614)
Q Consensus 504 RRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~--------------kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~ 569 (614)
.+|.++..+|++++|+..|+++++..|+........ .+..+. ..++..++...|.+++...+..
T Consensus 137 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~A~~~~~~a~~~~p~~ 214 (368)
T 1fch_A 137 ALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLL--SDSLFLEVKELFLAAVRLDPTS 214 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHH--HHHHHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHh--hcccHHHHHHHHHHHHHhCcCc
Confidence 999999999999999999999999998654322111 122121 3344445566677776665442
Q ss_pred --CCCCccCCcCCcccchhhhHHHHHHHHHHhcccc
Q 047433 570 --PVNNVQESYGENKSGIEEQRYCDMIRTMMEKKNL 603 (614)
Q Consensus 570 --~~~~~~e~~~~~~~g~~eQ~~dD~iral~~~~~~ 603 (614)
+.............+..+++...+.+++...|+.
T Consensus 215 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 250 (368)
T 1fch_A 215 IDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND 250 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 2212222223334455555666666666665543
No 56
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.31 E-value=7.1e-13 Score=120.69 Aligned_cols=97 Identities=7% Similarity=-0.127 Sum_probs=88.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHH
Q 047433 429 EAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQA 508 (614)
Q Consensus 429 ~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~A 508 (614)
.|..+...|++++||..|.+++...|.. +..+.++|.+|+++|+|++|+..++++|+++|+ +..+|+.+|.+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~-----~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~---~~~a~~~lg~~ 74 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQK-----SIKGFYFAKLYYEAKEYDLAKKYICTYINVQER---DPKAHRFLGLL 74 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHH-----HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCccc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHH
Confidence 4666777899999999999999999988 899999999999999999999999999999999 99999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 509 YDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 509 l~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
|..+|++++|+..|+++++++|++.
T Consensus 75 ~~~~~~~~~A~~~~~~al~~~p~~~ 99 (150)
T 4ga2_A 75 YELEENTDKAVECYRRSVELNPTQK 99 (150)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHcCchHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999643
No 57
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.31 E-value=7e-11 Score=110.02 Aligned_cols=100 Identities=16% Similarity=0.052 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccH---
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHC--- 499 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~--- 499 (614)
+..+...|..++..|+|++|+..|.++++++|.. ..++.++|.+|..+|++++|+..+++++++.|. +.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~ 108 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHL-----AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRG---NQLID 108 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT---CSEEE
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-----hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC---ccHHH
Confidence 3445555555555555555555555555555555 555555555555555555555555555555555 33
Q ss_pred -------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 500 -------------KSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 500 -------------KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
.+++.+|.++..+|++++|+..|++++++.|
T Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 152 (213)
T 1hh8_A 109 YKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKS 152 (213)
T ss_dssp CGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred HHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCc
Confidence 5555555555555555555555555555555
No 58
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.31 E-value=2.2e-11 Score=116.07 Aligned_cols=79 Identities=14% Similarity=0.062 Sum_probs=73.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHH
Q 047433 427 KQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRS 506 (614)
Q Consensus 427 K~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA 506 (614)
...|..++..|+|++|+..|+++|+++|++ +.++.++|.+|..+|++++|+..++++++++|+ +..+++.+|
T Consensus 58 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~---~~~a~~~lg 129 (208)
T 3urz_A 58 TELALAYKKNRNYDKAYLFYKELLQKAPNN-----VDCLEACAEMQVCRGQEKDALRMYEKILQLEAD---NLAANIFLG 129 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---CHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC---CHHHHHHHH
Confidence 449999999999999999999999999999 999999999999999999999999999999999 888888888
Q ss_pred HHHHHcC
Q 047433 507 QAYDMKG 513 (614)
Q Consensus 507 ~Al~~LG 513 (614)
.+|+..|
T Consensus 130 ~~~~~~~ 136 (208)
T 3urz_A 130 NYYYLTA 136 (208)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7775543
No 59
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.31 E-value=1.1e-11 Score=116.92 Aligned_cols=175 Identities=9% Similarity=-0.014 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC--cchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHh----------
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRP--KNERMVLYSNRAQCHLLLREPDAAISDATRALC---------- 490 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~--~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALe---------- 490 (614)
+..+...|..++..|+|++|+..|.+++++.|... ....+.++.++|.+|..+|++++|+..++++++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 117 (258)
T 3uq3_A 38 ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTK 117 (258)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHH
Confidence 34455555566666666666666666666555431 112245566666666666666666666666666
Q ss_pred ----------------cCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHH
Q 047433 491 ----------------LSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMN 554 (614)
Q Consensus 491 ----------------LdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqme 554 (614)
++|. +..+++.+|.++..+|++++|+..|+++++..|++ +.....+. ......++..+
T Consensus 118 ~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~l~-~~~~~~~~~~~ 191 (258)
T 3uq3_A 118 LRNAEKELKKAEAEAYVNPE---KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED--ARGYSNRA-AALAKLMSFPE 191 (258)
T ss_dssp HHHHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHHHHH-HHHHHTTCHHH
T ss_pred HhHHHHHHHHHHHHHHcCcc---hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCccc--HHHHHHHH-HHHHHhCCHHH
Confidence 3444 55566666666666666666666666666665532 11111111 11111222233
Q ss_pred HHHHHhhhhhcCCCCCCCCccCCcCCcccchhhhHHHHHHHHHHhcccc
Q 047433 555 ALWVFGGARSKILSSPVNNVQESYGENKSGIEEQRYCDMIRTMMEKKNL 603 (614)
Q Consensus 555 a~~lF~~Ai~k~~~~~~~~~~e~~~~~~~g~~eQ~~dD~iral~~~~~~ 603 (614)
+...|..++...+..+.............+..+++...+.+++...|.+
T Consensus 192 A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 240 (258)
T 3uq3_A 192 AIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEV 240 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhh
Confidence 4445555555443333222223333344555555666666666655433
No 60
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.30 E-value=1.6e-11 Score=117.89 Aligned_cols=96 Identities=13% Similarity=0.018 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHH-HHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRA-QCHLLLREPDAAISDATRALCLSNPPNSHCKSLW 503 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA-~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyy 503 (614)
.+...|..++..|+|++|+..|.++++++|.+ ..++.++| .+|. .+++++|+..++++++++|+ +..+++
T Consensus 110 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~---~~~~~~ 180 (272)
T 3u4t_A 110 MYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTD-----PKVFYELGQAYYY-NKEYVKADSSFVKVLELKPN---IYIGYL 180 (272)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCC-----HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTT---CHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHhhcCCCc-----HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcc---chHHHH
Confidence 45666666666666666666666666666666 66666666 3333 33666666666666666666 666666
Q ss_pred HHHHHHHHcCC---HHHHHHHHHHHHHcC
Q 047433 504 RRSQAYDMKGL---GRESLMDCIMFINGC 529 (614)
Q Consensus 504 RRA~Al~~LG~---yeEAL~df~kALkl~ 529 (614)
.+|.++..+|+ +++|+..|++++++.
T Consensus 181 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 181 WRARANAAQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHHHHHHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHcCcchhhHHHHHHHHHHHHHH
Confidence 66666666666 666666666666664
No 61
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.30 E-value=7e-11 Score=119.15 Aligned_cols=227 Identities=15% Similarity=-0.016 Sum_probs=145.1
Q ss_pred hhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHHHHHH-----HHHHhhhhhhh-ccCcHHHHHHHH
Q 047433 320 QYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLGEAITR-----ALLLDYKLTEQ-KFKNKKVQKALE 393 (614)
Q Consensus 320 ~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe~it~-----aLl~dy~~~~~-~p~n~e~~~aL~ 393 (614)
.+...+..+...++.+.+...+.+++...++..... ..+|..+.. .....|..... .|.+..+...+.
T Consensus 67 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~------~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 140 (365)
T 4eqf_A 67 GAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAW------QFLGITQAENENEQAAIVALQRCLELQPNNLKALMALA 140 (365)
T ss_dssp THHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH------HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHH------HHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 356677788888999999999999888777655544 222222211 11123333222 456666655555
Q ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHH----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CCcchh
Q 047433 394 EIWELKVERRKREKMMMMSEEKVEEMRVL----------VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPS--RPKNER 461 (614)
Q Consensus 394 el~~lkvEr~erEk~~~ls~eel~~~~~~----------A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~--~~~~~~ 461 (614)
.+.... .+.+... ..-..-+...+.. +..+...|..+...|++++|+..|.+++++.|. +
T Consensus 141 ~~~~~~-g~~~~A~--~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~----- 212 (365)
T 4eqf_A 141 VSYTNT-SHQQDAC--EALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMID----- 212 (365)
T ss_dssp HHHHHT-TCHHHHH--HHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCC-----
T ss_pred HHHHcc-ccHHHHH--HHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccC-----
Confidence 433211 0111111 1111111111111 222334588999999999999999999999998 7
Q ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcch
Q 047433 462 MVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKI 541 (614)
Q Consensus 462 a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl 541 (614)
+.++.++|.+|..+|++++|+..++++++++|+ +..+|+.+|.++..+|++++|+..|++++++.|++ +.....+
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~l 287 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE---DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGF--IRSRYNL 287 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc--hHHHHHH
Confidence 899999999999999999999999999999999 99999999999999999999999999999998854 3322222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcC
Q 047433 542 PYYAARMISKHMNALWVFGGARSKI 566 (614)
Q Consensus 542 ~~y~~r~i~Kqmea~~lF~~Ai~k~ 566 (614)
. .+....++..++...|.+++...
T Consensus 288 ~-~~~~~~g~~~~A~~~~~~al~~~ 311 (365)
T 4eqf_A 288 G-ISCINLGAYREAVSNFLTALSLQ 311 (365)
T ss_dssp H-HHHHHHTCCHHHHHHHHHHHHHH
T ss_pred H-HHHHHCCCHHHHHHHHHHHHHhC
Confidence 2 12222333445667777777665
No 62
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.29 E-value=1.2e-11 Score=128.76 Aligned_cols=57 Identities=14% Similarity=-0.001 Sum_probs=46.3
Q ss_pred HHhhhcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHh
Q 047433 287 RILCYSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFL 348 (614)
Q Consensus 287 ~~~~~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aL 348 (614)
+..|+...|+ +|+..+.++|+..|+.. ..+..++.++..+++.+.+...+.++...-
T Consensus 45 la~~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 103 (514)
T 2gw1_A 45 LSACYVSVGDLKKVVEMSTKALELKPDYS-----KVLLRRASANEGLGKFADAMFDLSVLSLNG 103 (514)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCSCCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhhHHHHHHHHHHHhccChHHH-----HHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 4567777777 79999999999988766 778888899999999999888888775543
No 63
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.29 E-value=2.5e-11 Score=111.99 Aligned_cols=102 Identities=11% Similarity=-0.033 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHc-CCcHHHHHHHHHHHh--cCCCCCcc
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLL-REPDAAISDATRALC--LSNPPNSH 498 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkL-GdyeeAI~D~~~ALe--LdP~~~~~ 498 (614)
.+..+...|..++..|++++|+..|.++++..|.+ ..++.++|.++..+ |++++|+..++++++ .+|. .
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~---~ 112 (225)
T 2vq2_A 41 NELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDS-----AEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT---P 112 (225)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC---H
T ss_pred chHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC-----hHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc---h
Confidence 45566777777777888888888888888877777 77777888888888 888888888888877 4455 6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 499 CKSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 499 ~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
..+++.+|.++..+|++++|+..|+++++..|+
T Consensus 113 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 145 (225)
T 2vq2_A 113 YIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ 145 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 777777888888888888888888888877764
No 64
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.29 E-value=1.6e-11 Score=109.35 Aligned_cols=171 Identities=9% Similarity=-0.060 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|..++..|++++|+..|+++++..|.+ ..++.++|.++...|++++|+..++++++++|. +..++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 79 (186)
T 3as5_A 8 QVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFD-----VDVALHLGIAYVKTGAVDRGTELLERSLADAPD---NVKVA 79 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccC-----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---CHHHH
Confidence 4456667777777777777777777777777776 777777777777777777777777777777777 77777
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCcCCcc
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPVNNVQESYGENK 582 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~~e~~~~~~ 582 (614)
+.+|.++...|++++|+..|+++++..|++ +.....+. ......++..++...|.+++...+..+............
T Consensus 80 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~~~~a-~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (186)
T 3as5_A 80 TVLGLTYVQVQKYDLAVPLLIKVAEANPIN--FNVRFRLG-VALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQ 156 (186)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTC--HHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCcHh--HHHHHHHH-HHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 777777777777777777777777776642 22111111 111112222334445555555443322222222222334
Q ss_pred cchhhhHHHHHHHHHHhccccc
Q 047433 583 SGIEEQRYCDMIRTMMEKKNLI 604 (614)
Q Consensus 583 ~g~~eQ~~dD~iral~~~~~~~ 604 (614)
.+..+++...+.+++...|+..
T Consensus 157 ~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 157 MGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp TTCHHHHHHHHHHHHHHHHCCC
T ss_pred cCCHHHHHHHHHHHHHcCCCch
Confidence 4555666666666776666544
No 65
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.29 E-value=4e-11 Score=111.67 Aligned_cols=101 Identities=11% Similarity=-0.036 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|+.++..|+|++|+..|++++ .| + +.++.++|.+|..+|++++|+..++++++++|. +..+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~---~~~~ 73 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQ--DP-H-----SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH---LAVA 73 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-C-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-C-----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc---chHH
Confidence 44578899999999999999999999996 34 4 789999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
++.+|.++..+|++++|+..|++++++.|++.
T Consensus 74 ~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 74 YFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999999999998755
No 66
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.29 E-value=6.3e-11 Score=127.00 Aligned_cols=173 Identities=12% Similarity=-0.071 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
...+...|..+.+.|++++|+..|+++++..|.+ ...+.+++.+|.+.|++++|+..++++++++|. +..+|
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~---~~~~~ 478 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGT-----HLPYLFLGMQHMQLGNILLANEYLQSSYALFQY---DPLLL 478 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTC-----SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---ChHHH
Confidence 4468888999999999999999999999999988 889999999999999999999999999999999 89999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCC---CCC--hHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCC
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMFINGCIR---SET--TSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPVNNVQES 577 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kALkl~P~---~~D--~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~~e~ 577 (614)
..+|.++...|++++|+..|+++++..|+ .++ ......+. ......++..++...|.+++...+..+.....-.
T Consensus 479 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~-~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~ 557 (597)
T 2xpi_A 479 NELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLG-HAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIA 557 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHH-HHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 99999999999999999999999998542 112 11111111 1122233344566677777766644443333444
Q ss_pred cCCcccchhhhHHHHHHHHHHhccccc
Q 047433 578 YGENKSGIEEQRYCDMIRTMMEKKNLI 604 (614)
Q Consensus 578 ~~~~~~g~~eQ~~dD~iral~~~~~~~ 604 (614)
......|..+++.+.+.+++..+|+..
T Consensus 558 ~~~~~~g~~~~A~~~~~~~l~~~p~~~ 584 (597)
T 2xpi_A 558 LVYLHKKIPGLAITHLHESLAISPNEI 584 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCCCCh
Confidence 455567777888888888888887653
No 67
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.28 E-value=3.9e-11 Score=113.71 Aligned_cols=100 Identities=9% Similarity=-0.039 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccH----
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHC---- 499 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~---- 499 (614)
..+...|..++..|+|++|+..|.++++++|.+ ..++.++|.+|..+|++++|+..++++++++|+ +.
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~ 114 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNL-----ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPG---NATIEK 114 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcch-----HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC---cHHHHH
Confidence 356679999999999999999999999999998 999999999999999999999999999999999 77
Q ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 500 ---KSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 500 ---KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
.+|+.+|.++..+|++++|+..|++++++.|+
T Consensus 115 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 115 LYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 77999999999999999999999999999884
No 68
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.28 E-value=4.4e-10 Score=106.83 Aligned_cols=194 Identities=8% Similarity=-0.080 Sum_probs=141.2
Q ss_pred hhcccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHHH
Q 047433 290 CYSKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLGEA 367 (614)
Q Consensus 290 ~~~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe~ 367 (614)
++...|+ +|+..++++++..++.. ..+..++.++...++.+.+...+.++....++...+.
T Consensus 46 ~~~~~~~~~~A~~~~~~al~~~~~~~-----~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~------------ 108 (252)
T 2ho1_A 46 GYLQRGNTEQAKVPLRKALEIDPSSA-----DAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVL------------ 108 (252)
T ss_dssp HHHHTTCTGGGHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH------------
T ss_pred HHHHcCChHHHHHHHHHHHhcCCChH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHH------------
Confidence 4445554 78888899988877655 6777788888888888888888887766544322211
Q ss_pred HHHHHHHhhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 047433 368 ITRALLLDYKLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIEEAAMKYT 447 (614)
Q Consensus 368 it~aLl~dy~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~GdyeeAI~~Yt 447 (614)
..+...|.. .+...+++..+.... + . ...+ ..+..+...|..++..|++++|+..|.
T Consensus 109 --~~la~~~~~------~g~~~~A~~~~~~~~----~--~--~~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~ 165 (252)
T 2ho1_A 109 --NNYGGFLYE------QKRYEEAYQRLLEAS----Q--D--TLYP-------ERSRVFENLGLVSLQMKKPAQAKEYFE 165 (252)
T ss_dssp --HHHHHHHHH------TTCHHHHHHHHHHHT----T--C--TTCT-------THHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred --HHHHHHHHH------HhHHHHHHHHHHHHH----h--C--ccCc-------ccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 111111111 001111122111111 0 0 0111 134577888999999999999999999
Q ss_pred HHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 047433 448 EALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFIN 527 (614)
Q Consensus 448 kAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALk 527 (614)
++++..|.+ ..++.++|.++..+|++++|+..++++++++|. +..+++.++.++..+|++++|...++++++
T Consensus 166 ~~~~~~~~~-----~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~ 237 (252)
T 2ho1_A 166 KSLRLNRNQ-----PSVALEMADLLYKEREYVPARQYYDLFAQGGGQ---NARSLLLGIRLAKVFEDRDTAASYGLQLKR 237 (252)
T ss_dssp HHHHHCSCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhcCccc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC---cHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 999999998 899999999999999999999999999999999 899999999999999999999999999999
Q ss_pred cCCC
Q 047433 528 GCIR 531 (614)
Q Consensus 528 l~P~ 531 (614)
..|+
T Consensus 238 ~~p~ 241 (252)
T 2ho1_A 238 LYPG 241 (252)
T ss_dssp HCTT
T ss_pred HCCC
Confidence 9885
No 69
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.28 E-value=4.5e-11 Score=112.19 Aligned_cols=170 Identities=12% Similarity=-0.050 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|..++..|++++|+..|.++++..|.. ..++.++|.++..+|++++|+..++++++++|. +..++
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 128 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSSA-----ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGME---NGDLF 128 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC---SHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc-----hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC---CHHHH
Confidence 3456666777777777777777777777777766 677777777777777777777777777777777 67777
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCcCCcc
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPVNNVQESYGENK 582 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~~e~~~~~~ 582 (614)
+.+|.++..+|++++|+..|+++++..|++ +.....+. ......++..++...|.+++...+..+............
T Consensus 129 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~~~l~-~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 205 (243)
T 2q7f_A 129 YMLGTVLVKLEQPKLALPYLQRAVELNEND--TEARFQFG-MCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAY 205 (243)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHCTTC--HHHHHHHH-HHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCcc--HHHHHHHH-HHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 777777777777777777777777776632 22111111 011111222233444555554443322222222222334
Q ss_pred cchhhhHHHHHHHHHHhcccc
Q 047433 583 SGIEEQRYCDMIRTMMEKKNL 603 (614)
Q Consensus 583 ~g~~eQ~~dD~iral~~~~~~ 603 (614)
.+..+++...+.+++...|+.
T Consensus 206 ~~~~~~A~~~~~~~~~~~p~~ 226 (243)
T 2q7f_A 206 KENREKALEMLDKAIDIQPDH 226 (243)
T ss_dssp TTCTTHHHHHHHHHHHHCTTC
T ss_pred ccCHHHHHHHHHHHHccCcch
Confidence 455566666666677766654
No 70
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.28 E-value=1.1e-10 Score=97.47 Aligned_cols=101 Identities=18% Similarity=0.132 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|..++..|++++|+..|.++++..|.+ ..++.++|.++...|++++|+..++++++++|. +..++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 80 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN---NAEAW 80 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc---cHHHH
Confidence 5578889999999999999999999999999998 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
+.+|.++..+|++++|+..|+++++..|+
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 109 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEAIEYYQKALELDPN 109 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999884
No 71
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.28 E-value=1.5e-10 Score=120.65 Aligned_cols=173 Identities=12% Similarity=-0.041 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccH
Q 047433 420 RVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHC 499 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~ 499 (614)
+..+..+...|..++..|++++|+..|+++++..|. ..++.++|.+|..+|++++|+..++++++++|. +.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~---~~ 304 (514)
T 2gw1_A 234 EKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELFPR------VNSYIYMALIMADRNDSTEYYNYFDKALKLDSN---NS 304 (514)
T ss_dssp HHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTT---CT
T ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc------HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcC---CH
Confidence 556778899999999999999999999999999885 788999999999999999999999999999999 89
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCcC
Q 047433 500 KSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPVNNVQESYG 579 (614)
Q Consensus 500 KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~~e~~~ 579 (614)
.+++.+|.++..+|++++|+..|+++++..|++.... ..+. ......++..++...|..++...+..+.........
T Consensus 305 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~--~~l~-~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 381 (514)
T 2gw1_A 305 SVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPY--IQLA-CLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEI 381 (514)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHH--HHHH-HHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHH--HHHH-HHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHH
Confidence 9999999999999999999999999999988643321 1111 111112233445566777766654444333333334
Q ss_pred CcccchhhhHHHHHHHHHHhccccc
Q 047433 580 ENKSGIEEQRYCDMIRTMMEKKNLI 604 (614)
Q Consensus 580 ~~~~g~~eQ~~dD~iral~~~~~~~ 604 (614)
....+..+++...+.+++...|+..
T Consensus 382 ~~~~~~~~~A~~~~~~a~~~~~~~~ 406 (514)
T 2gw1_A 382 LTDKNDFDKALKQYDLAIELENKLD 406 (514)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTSS
T ss_pred HHHCCCHHHHHHHHHHHHHhhhccc
Confidence 4455666677777777777776653
No 72
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.27 E-value=3.4e-11 Score=99.17 Aligned_cols=102 Identities=10% Similarity=0.005 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWR 504 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyR 504 (614)
.+...|..++..|+|++|+..|.+++++.|.+ ..++.++|.++..+|++++|+..++++++++|. ..+..+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~ 81 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEE-----SKYWLMKGKALYNLERYEEAVDCYNYVINVIED-EYNKDVWAA 81 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC-TTCHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc-cchHHHHHH
Confidence 56778999999999999999999999999998 999999999999999999999999999999986 235789999
Q ss_pred HHHHHHHc-CCHHHHHHHHHHHHHcCCCC
Q 047433 505 RSQAYDMK-GLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 505 RA~Al~~L-G~yeEAL~df~kALkl~P~~ 532 (614)
+|.++..+ |++++|+..++++++..|.+
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 82 KADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 99999999 99999999999999998854
No 73
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.27 E-value=1.3e-11 Score=133.21 Aligned_cols=171 Identities=11% Similarity=-0.022 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHHcCCH-HHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHH
Q 047433 422 LVGLIKQEAKHLFWLGEI-EEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCK 500 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~Gdy-eeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~K 500 (614)
.+..+...|..++..|+| ++|+..|+++++++|.+ +.+|.++|.+|.++|++++|+..++++++++|+ . .
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~-~ 171 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL-----VEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN---K-V 171 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC---H-H
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC---H-H
Confidence 456788999999999999 99999999999999998 899999999999999999999999999999988 4 8
Q ss_pred HHHHHHHHHHHc---------CCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHH--------HHHHHHHHHHhhhh
Q 047433 501 SLWRRSQAYDMK---------GLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMI--------SKHMNALWVFGGAR 563 (614)
Q Consensus 501 AyyRRA~Al~~L---------G~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i--------~Kqmea~~lF~~Ai 563 (614)
+++.+|.++..+ |++++|+..|++++++.|++.+ ....+. .+.... ++..++...|.+++
T Consensus 172 ~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~--~~~~lg-~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 172 SLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGR--SWYILG-NAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHH--HHHHHH-HHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHH--HHHHHH-HHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 999999999999 9999999999999999885433 222222 111122 44456667788887
Q ss_pred hcCC---CCCCCCccCCcCCcccchhhhHHHHHHHHHHhccccc
Q 047433 564 SKIL---SSPVNNVQESYGENKSGIEEQRYCDMIRTMMEKKNLI 604 (614)
Q Consensus 564 ~k~~---~~~~~~~~e~~~~~~~g~~eQ~~dD~iral~~~~~~~ 604 (614)
..++ ..+....+........+..+++...+.+++..+|++.
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 7664 3333333444445556777778888888888877653
No 74
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.27 E-value=1e-10 Score=126.09 Aligned_cols=169 Identities=14% Similarity=-0.040 Sum_probs=127.4
Q ss_pred chhhhhhHHHHhccCh-hHHHHHHHHHHHHhhchhhhhhccCCCcCcHHHHHHHHHHhhhhhhhccCcHHHHHHHHHHHH
Q 047433 319 WQYMGIDCLLFLLKDP-DTRYKVIETAALFLIDLVELNSLLDRPKNLGEAITRALLLDYKLTEQKFKNKKVQKALEEIWE 397 (614)
Q Consensus 319 w~y~~idcll~Llkd~-~try~v~dka~~aLvDLseL~~Lg~~~k~lGe~it~aLl~dy~~~~~~p~n~e~~~aL~el~~ 397 (614)
..+..++.++..+++. +.+...+.+++..-++..+.. ..+|..+... .+ ..+++..+..
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~------~~lg~~~~~~--g~------------~~~A~~~~~~ 162 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAW------NQLGEVYWKK--GD------------VTSAHTCFSG 162 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHH------HHHHHHHHHH--TC------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHH------HHHHHHHHHc--CC------------HHHHHHHHHH
Confidence 6677777777778887 777777777776655544333 1222211110 01 1111221111
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHc---------CCHHHHHHHHHHHHhhCCCCCcchhHHHHHHH
Q 047433 398 LKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWL---------GEIEEAAMKYTEALGVCPSRPKNERMVLYSNR 468 (614)
Q Consensus 398 lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~---------GdyeeAI~~YtkAIel~P~~~~~~~a~lysNR 468 (614)
.. .+.+. +..+...|..++.. |+|++|+..|.++++++|++ ..+|.++
T Consensus 163 --------al--~~~p~--------~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~l 219 (474)
T 4abn_A 163 --------AL--THCKN--------KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD-----GRSWYIL 219 (474)
T ss_dssp --------HH--TTCCC--------HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC-----HHHHHHH
T ss_pred --------HH--hhCCC--------HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC-----HHHHHHH
Confidence 11 22211 24677888888888 99999999999999999999 9999999
Q ss_pred HHHHHHc--------CCcHHHHHHHHHHHhcCC---CCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 469 AQCHLLL--------REPDAAISDATRALCLSN---PPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 469 A~~ylkL--------GdyeeAI~D~~~ALeLdP---~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
|.+|..+ |++++|+..+++|++++| . +..+|+.+|.+|..+|++++|+..|++++++.|++.
T Consensus 220 g~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 220 GNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASS---NPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGG---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCccc---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999 999999999999999999 8 999999999999999999999999999999998643
No 75
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.25 E-value=5e-11 Score=114.48 Aligned_cols=179 Identities=9% Similarity=-0.023 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|..++..|+|++|+..|+++++..|.+ .....++.++|.+|+++|+|++|+..++++++++|+......++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~--~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~ 81 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFG--PYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVM 81 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS--TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHH
Confidence 4568889999999999999999999999999864 23357899999999999999999999999999999932223589
Q ss_pred HHHHHHHHH------------------cCCHHHHHHHHHHHHHcCCCCCChHh-hcchHHHHH-------------HHHH
Q 047433 503 WRRSQAYDM------------------KGLGRESLMDCIMFINGCIRSETTSK-RVKIPYYAA-------------RMIS 550 (614)
Q Consensus 503 yRRA~Al~~------------------LG~yeEAL~df~kALkl~P~~~D~~~-k~kl~~y~~-------------r~i~ 550 (614)
+.+|.++.. +|++++|+..|+++++..|++..... ...+..... ...+
T Consensus 82 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~ 161 (225)
T 2yhc_A 82 YMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERG 161 (225)
T ss_dssp HHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999987 57999999999999999998765321 111110000 0111
Q ss_pred HHHHHHHHHhhhhhcCCCCCC---CCccCCcCCcccchhhhHHHHHHHHHHhcccc
Q 047433 551 KHMNALWVFGGARSKILSSPV---NNVQESYGENKSGIEEQRYCDMIRTMMEKKNL 603 (614)
Q Consensus 551 Kqmea~~lF~~Ai~k~~~~~~---~~~~e~~~~~~~g~~eQ~~dD~iral~~~~~~ 603 (614)
+-.++...|.+++...+..+. ............|..+++.+.+.+.....|+.
T Consensus 162 ~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~ 217 (225)
T 2yhc_A 162 AWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNT 217 (225)
T ss_dssp CHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCC
T ss_pred cHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCc
Confidence 123444556666655543321 11122233345556666666655555555544
No 76
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.25 E-value=6e-12 Score=108.78 Aligned_cols=90 Identities=13% Similarity=-0.048 Sum_probs=81.6
Q ss_pred HcCCHHHHHHHHHHHHhh---CCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHH
Q 047433 435 WLGEIEEAAMKYTEALGV---CPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDM 511 (614)
Q Consensus 435 k~GdyeeAI~~YtkAIel---~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~ 511 (614)
..|+|++|+..|.++|++ +|.+ ..++.++|.+|..+|+|++|+..++++++++|+ +..+++.+|.++..
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~ 73 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDL-----AECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN---HQALRVFYAMVLYN 73 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccH-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---chHHHHHHHHHHHH
Confidence 368999999999999999 5776 899999999999999999999999999999999 99999999999999
Q ss_pred cCCHHHHHHHHHHHHHcCCCC
Q 047433 512 KGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 512 LG~yeEAL~df~kALkl~P~~ 532 (614)
+|++++|+..|+++++..|++
T Consensus 74 ~g~~~~A~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 74 LGRYEQGVELLLKIIAETSDD 94 (117)
T ss_dssp HTCHHHHHHHHHHHHHHHCCC
T ss_pred cCCHHHHHHHHHHHHHhCCCc
Confidence 999999999999999998853
No 77
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.24 E-value=1.1e-10 Score=106.46 Aligned_cols=105 Identities=11% Similarity=0.052 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHH-HHHcCCc--HHHHHHHHHHHhcCCCCCcc
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQC-HLLLREP--DAAISDATRALCLSNPPNSH 498 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~-ylkLGdy--eeAI~D~~~ALeLdP~~~~~ 498 (614)
.+..+...|..++..|+|++|+..|.++++++|.+ ..++.++|.+ +...|++ ++|+..++++++++|. +
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~---~ 114 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN-----AELYAALATVLYYQASQHMTAQTRAMIDKALALDSN---E 114 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC-----HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTT---C
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCC---c
Confidence 34578899999999999999999999999999999 9999999999 8899999 9999999999999999 9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 499 CKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 499 ~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
..+++.+|.++..+|++++|+..|++++++.|++.+
T Consensus 115 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 150 (177)
T 2e2e_A 115 ITALMLLASDAFMQANYAQAIELWQKVMDLNSPRIN 150 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCcc
Confidence 999999999999999999999999999999996543
No 78
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.24 E-value=4.7e-11 Score=114.58 Aligned_cols=100 Identities=9% Similarity=-0.034 Sum_probs=46.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHH
Q 047433 426 IKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRR 505 (614)
Q Consensus 426 lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRR 505 (614)
+...|..++..|+|++|+..|.++++ .|.+ ......+|.++|.+|..+|++++|+..++++++++|. +..+++.+
T Consensus 40 ~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~l 114 (272)
T 3u4t_A 40 YNRRAVCYYELAKYDLAQKDIETYFS-KVNA-TKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT---RLDMYGQI 114 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHT-TSCT-TTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CTHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHh-ccCc-hhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc---cHHHHHHH
Confidence 44444444444444444444444444 2221 2222334444455555555555555555555554444 44444444
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 506 SQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 506 A~Al~~LG~yeEAL~df~kALkl~P 530 (614)
|.++..+|++++|+..|+++++..|
T Consensus 115 ~~~~~~~~~~~~A~~~~~~al~~~~ 139 (272)
T 3u4t_A 115 GSYFYNKGNFPLAIQYMEKQIRPTT 139 (272)
T ss_dssp HHHHHHTTCHHHHHHHHGGGCCSSC
T ss_pred HHHHHHccCHHHHHHHHHHHhhcCC
Confidence 5555555555555555544444444
No 79
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.23 E-value=1.2e-11 Score=117.55 Aligned_cols=90 Identities=12% Similarity=0.011 Sum_probs=84.5
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCc----------HHHHHHHHHHHhcCCCCCccHHHHHH
Q 047433 435 WLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREP----------DAAISDATRALCLSNPPNSHCKSLWR 504 (614)
Q Consensus 435 k~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdy----------eeAI~D~~~ALeLdP~~~~~~KAyyR 504 (614)
+.+.|++|+..|.++++++|++ +.+|.|+|.++..++++ ++||..+++||+++|+ +..+||+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~-----aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~---~~~A~~~ 85 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLD-----ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK---KDEAVWC 85 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT---CHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC---cHHHHHH
Confidence 4567999999999999999999 99999999999999876 5999999999999999 9999999
Q ss_pred HHHHHHHcC-----------CHHHHHHHHHHHHHcCCCC
Q 047433 505 RSQAYDMKG-----------LGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 505 RA~Al~~LG-----------~yeEAL~df~kALkl~P~~ 532 (614)
+|.+|..+| ++++|+..|++|++++|++
T Consensus 86 LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 86 IGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 999999985 8999999999999999964
No 80
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.23 E-value=6.5e-11 Score=133.73 Aligned_cols=101 Identities=13% Similarity=0.029 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|..++..|+|++|+..|++||+++|++ ..++.|+|.+|.++|+|++ +..|++|++++|+ +..+|
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~-----~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~---~~~a~ 537 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGE-----LAPKLALAATAELAGNTDE-HKFYQTVWSTNDG---VISAA 537 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC-----SHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----hHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCc---hHHHH
Confidence 4467788888888888888888888888888888 8888888888888888888 8888888888888 88888
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
+++|.++..+|++++|+.+|+++++++|++
T Consensus 538 ~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 567 (681)
T 2pzi_A 538 FGLARARSAEGDRVGAVRTLDEVPPTSRHF 567 (681)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSCTTSTTH
T ss_pred HHHHHHHHHcCCHHHHHHHHHhhcccCccc
Confidence 888888888888888888888888888753
No 81
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.22 E-value=6e-10 Score=119.40 Aligned_cols=104 Identities=15% Similarity=0.081 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR--PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~--~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
..+...|..+++.|++++|+..|.+++++.|.. .+.....+|.+++.+|.+.|++++|+..++++++++|+ +..+
T Consensus 476 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~---~~~~ 552 (597)
T 2xpi_A 476 LLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTN---DANV 552 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSC---CHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---ChHH
Confidence 345555555555555555555555555553210 01112455555555555555555555555555555555 5555
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
|+.+|.+|...|++++|+..|++++++.|
T Consensus 553 ~~~l~~~~~~~g~~~~A~~~~~~~l~~~p 581 (597)
T 2xpi_A 553 HTAIALVYLHKKIPGLAITHLHESLAISP 581 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Confidence 55555555555555555555555555555
No 82
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.21 E-value=1.4e-10 Score=106.94 Aligned_cols=101 Identities=11% Similarity=0.028 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHh--hCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCcc
Q 047433 422 LVGLIKQEAKHLFWL-GEIEEAAMKYTEALG--VCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSH 498 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~-GdyeeAI~~YtkAIe--l~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~ 498 (614)
.+..+...|..++.. |++++|+..|.++++ ..|.. ..++.++|.++..+|++++|+..++++++++|. +
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~---~ 146 (225)
T 2vq2_A 75 SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTP-----YIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ---F 146 (225)
T ss_dssp CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---C
T ss_pred ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcch-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---C
Confidence 456677788888888 888888888888888 44444 778888888888888888888888888888888 8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 499 CKSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 499 ~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
..+++.+|.++..+|++++|+..|+++++..|
T Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 147 PPAFKELARTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 88888888888888888888888888888877
No 83
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.20 E-value=1.9e-10 Score=112.17 Aligned_cols=103 Identities=13% Similarity=0.047 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHH
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLW 503 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyy 503 (614)
..+...|..++..|+|++|+..|+++++.+|.+ ..++.++|.++..+|++++|+..++++++++|. +..+++
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~ 93 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPER-----EEAWRSLGLTQAENEKDGLAIIALNHARMLDPK---DIAVHA 93 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcC---CHHHHH
Confidence 357788999999999999999999999999998 999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 504 RRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 504 RRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
.+|.++..+|++++|+..|+++++..|+...
T Consensus 94 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 124 (327)
T 3cv0_A 94 ALAVSHTNEHNANAALASLRAWLLSQPQYEQ 124 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSTTTTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCccHH
Confidence 9999999999999999999999999886544
No 84
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.20 E-value=2.1e-10 Score=109.05 Aligned_cols=98 Identities=10% Similarity=-0.148 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHh--cCCCCCccHHHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALC--LSNPPNSHCKSL 502 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALe--LdP~~~~~~KAy 502 (614)
.+...|..++..|++++|+..|.++++..|.+ ..++.++|.+|..+|++++|+..++++++ .+|. +..++
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~---~~~~~ 144 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALASDSRN-----ARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPE---RSRVF 144 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTT---HHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-----HHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcc---cHHHH
Confidence 45555566666666666666666666666655 56666666666666666666666666666 5555 55666
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
+.+|.++..+|++++|+..|+++++..|
T Consensus 145 ~~la~~~~~~g~~~~A~~~~~~~~~~~~ 172 (252)
T 2ho1_A 145 ENLGLVSLQMKKPAQAKEYFEKSLRLNR 172 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCc
Confidence 6666666666666666666666666655
No 85
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.20 E-value=5e-10 Score=99.52 Aligned_cols=101 Identities=14% Similarity=-0.045 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHH
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLW 503 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyy 503 (614)
..+...|..++..|++++|+..|.++++..|.+ ..++.++|.++..+|++++|+..+.++++++|. +..+++
T Consensus 77 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~~ 148 (186)
T 3as5_A 77 KVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN-----FNVRFRLGVALDNLGRFDEAIDSFKIALGLRPN---EGKVHR 148 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh-----HHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCcc---chHHHH
Confidence 356667777777777777777777777777777 777777777777777777777777777777777 777777
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 504 RRSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 504 RRA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
.+|.++..+|++++|+..++++++..|++
T Consensus 149 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 177 (186)
T 3as5_A 149 AIAFSYEQMGRHEEALPHFKKANELDEGA 177 (186)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 77777777777777777777777776643
No 86
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.19 E-value=5.4e-10 Score=108.52 Aligned_cols=110 Identities=11% Similarity=0.008 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHH--------cCCcHHHHHHHHHHHhcCCC
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLL--------LREPDAAISDATRALCLSNP 494 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylk--------LGdyeeAI~D~~~ALeLdP~ 494 (614)
+..+...|..++..|+|++|+..|+++|++.|++ .....++.++|.+++. +|++++|+..++++++++|+
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~--~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~ 129 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQID--PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPN 129 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCC--chhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcC
Confidence 5578999999999999999999999999999864 3447889999999999 99999999999999999999
Q ss_pred CCccHHHH--------------HHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 495 PNSHCKSL--------------WRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 495 ~~~~~KAy--------------yRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
......++ +.+|.+|..+|++++|+..|+++++..|++..
T Consensus 130 ~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~ 183 (261)
T 3qky_A 130 HELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPW 183 (261)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCch
Confidence 32223343 99999999999999999999999999996543
No 87
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.17 E-value=6.8e-11 Score=104.99 Aligned_cols=109 Identities=10% Similarity=-0.056 Sum_probs=82.6
Q ss_pred HHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 047433 448 EALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFIN 527 (614)
Q Consensus 448 kAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALk 527 (614)
+...++|+. +..+.|+|.+|++.|+|++|+..+++||+++|. +..+|+.+|.+|..+|++++|+.+|+++++
T Consensus 4 r~a~inP~~-----a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 4 RLAYINPEL-----AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE---NAILYSNRAACLTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp ---CCCHHH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHCHHH-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHhhHHHhhccHHHHHHHHHHHHH
Confidence 445678877 999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred cCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 047433 528 GCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKIL 567 (614)
Q Consensus 528 l~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~ 567 (614)
++|++.... ..+. .+....++..++...|.+++..++
T Consensus 76 ~~p~~~~a~--~~lg-~~~~~~~~~~~A~~~~~~al~l~P 112 (126)
T 4gco_A 76 LDSKFIKGY--IRKA-ACLVAMREWSKAQRAYEDALQVDP 112 (126)
T ss_dssp HCTTCHHHH--HHHH-HHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhhhhhHHH--HHHH-HHHHHCCCHHHHHHHHHHHHHHCc
Confidence 988543322 1111 111222333344555555555543
No 88
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.17 E-value=2.6e-10 Score=124.22 Aligned_cols=99 Identities=10% Similarity=-0.044 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHH
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLW 503 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyy 503 (614)
..+...|..++..|+|++|+..|+++++++|++ ..++.++|.+|..+|++++|+..++++++++|+ +..+++
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~ 95 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPGH-----PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE---HPGIAL 95 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC---CHHHHH
Confidence 345555555555566666666666666655555 555556666666666666666666666666555 555555
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 504 RRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 504 RRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
.+|.+|..+|++++|+..|++++++.|
T Consensus 96 ~la~~~~~~g~~~~A~~~~~~al~~~p 122 (568)
T 2vsy_A 96 WLGHALEDAGQAEAAAAAYTRAHQLLP 122 (568)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 566666666666666666666665555
No 89
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.17 E-value=6.4e-10 Score=93.19 Aligned_cols=99 Identities=19% Similarity=0.141 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWR 504 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyR 504 (614)
.+...|..++..|++++|+..|.++++..|.+ ...+.++|.++...|++++|+..+++++.++|. +..+++.
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~~~ 74 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRS-----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR---SAEAWYN 74 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---CHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc-----hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC---chHHHHH
Confidence 46678888999999999999999999999988 889999999999999999999999999999999 8899999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 505 RSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 505 RA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
+|.++...|++++|+..++++++..|+
T Consensus 75 l~~~~~~~~~~~~A~~~~~~~~~~~~~ 101 (136)
T 2fo7_A 75 LGNAYYKQGDYDEAIEYYQKALELDPR 101 (136)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999998774
No 90
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.16 E-value=4.3e-11 Score=135.17 Aligned_cols=136 Identities=16% Similarity=0.040 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..++..|+|++|+..|+++++++|++ ..+|+++|.+|+.+|+|++|+.++++|++++|+ +..+
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~---~~~~ 503 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLAERVGWR-----WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG---ELAP 503 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT---CSHH
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcch-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---ChHH
Confidence 45578899999999999999999999999999999 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSS 569 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~ 569 (614)
|+.+|.++..+|++++ +..|+++++++|++... ...+. .+....++..++...|.+++..++..
T Consensus 504 ~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a--~~~lg-~~~~~~g~~~~A~~~~~~al~l~P~~ 567 (681)
T 2pzi_A 504 KLALAATAELAGNTDE-HKFYQTVWSTNDGVISA--AFGLA-RARSAEGDRVGAVRTLDEVPPTSRHF 567 (681)
T ss_dssp HHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHH--HHHHH-HHHHHTTCHHHHHHHHHTSCTTSTTH
T ss_pred HHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHH--HHHHH-HHHHHcCCHHHHHHHHHhhcccCccc
Confidence 9999999999999999 99999999999964332 22222 11222333445666777776665443
No 91
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.16 E-value=2e-10 Score=98.12 Aligned_cols=88 Identities=10% Similarity=-0.022 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHH
Q 047433 440 EEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESL 519 (614)
Q Consensus 440 eeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL 519 (614)
++|+..|.++++.+|++ +.++.++|.+|..+|++++|+..++++++++|. +..+|+.+|.++..+|++++|+
T Consensus 2 ~~a~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~la~~~~~~g~~~~A~ 73 (115)
T 2kat_A 2 QAITERLEAMLAQGTDN-----MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT---YSVAWKWLGKTLQGQGDRAGAR 73 (115)
T ss_dssp CCHHHHHHHHHTTTCCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC---cHHHHHHHHHHHHHcCCHHHHH
Confidence 36899999999999999 999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCh
Q 047433 520 MDCIMFINGCIRSETT 535 (614)
Q Consensus 520 ~df~kALkl~P~~~D~ 535 (614)
..|++++++.|+..+.
T Consensus 74 ~~~~~al~~~~~~~~~ 89 (115)
T 2kat_A 74 QAWESGLAAAQSRGDQ 89 (115)
T ss_dssp HHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHhccccccH
Confidence 9999999998754443
No 92
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.15 E-value=3.6e-10 Score=117.68 Aligned_cols=213 Identities=11% Similarity=0.037 Sum_probs=124.2
Q ss_pred hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHHHHHHHHHHhh
Q 047433 297 KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLGEAITRALLLDY 376 (614)
Q Consensus 297 ~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe~it~aLl~dy 376 (614)
+|+..++++++..|+.. +.+..++.++...++.+.+...+.++....|+...+. .++|...........
T Consensus 231 ~a~~~~~~al~~~~~~~-----~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~------~~lg~~y~~~~~~~~ 299 (472)
T 4g1t_A 231 EGEKLVEEALEKAPGVT-----DVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLH------CQIGCCYRAKVFQVM 299 (472)
T ss_dssp HHHHHHHHHHHHCSSCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccHH-----HHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHH------HHHHHHHHHHHHHhh
Confidence 57777888888777766 6777788888888888888888888887777766655 444444333222111
Q ss_pred hhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047433 377 KLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR 456 (614)
Q Consensus 377 ~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~ 456 (614)
... .................. +-.++. ....+..+..+...|..+...|+|++|+..|+++|++.|..
T Consensus 300 ~~~--~~~~~~~~~~~~~~~~A~-~~~~~a---------~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~ 367 (472)
T 4g1t_A 300 NLR--ENGMYGKRKLLELIGHAV-AHLKKA---------DEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTP 367 (472)
T ss_dssp HC--------CHHHHHHHHHHHH-HHHHHH---------HHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCH
T ss_pred hHH--HHHHHHHHHHHhhHHHHH-HHHHHH---------hhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCC
Confidence 000 000000000000000000 000000 11112233457788999999999999999999999998864
Q ss_pred CcchhHHHHHHHHHH-HHHcCCcHHHHHHHHHHHhcCCCC---------------------CccHHHHHHHHHHHHHcCC
Q 047433 457 PKNERMVLYSNRAQC-HLLLREPDAAISDATRALCLSNPP---------------------NSHCKSLWRRSQAYDMKGL 514 (614)
Q Consensus 457 ~~~~~a~lysNRA~~-ylkLGdyeeAI~D~~~ALeLdP~~---------------------~~~~KAyyRRA~Al~~LG~ 514 (614)
.....++.+.+.. +..+|++++|+..+.+||+++|.. +.++.+|+.+|.+|..+|+
T Consensus 368 --~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~~~~~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~ 445 (472)
T 4g1t_A 368 --VAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGADSEALHVLAFLQELNEK 445 (472)
T ss_dssp --HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 2334556677654 567899999999999999886541 1156789999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCC
Q 047433 515 GRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 515 yeEAL~df~kALkl~P~~~D 534 (614)
+++|+..|++++++.|..++
T Consensus 446 ~~~A~~~y~kALe~~~~~p~ 465 (472)
T 4g1t_A 446 MQQADEDSERGLESGSLIPS 465 (472)
T ss_dssp CC------------------
T ss_pred HHHHHHHHHHHHhcCCCCCc
Confidence 99999999999999775444
No 93
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.15 E-value=1.9e-09 Score=108.82 Aligned_cols=91 Identities=16% Similarity=0.109 Sum_probs=85.5
Q ss_pred HHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcC
Q 047433 434 FWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKG 513 (614)
Q Consensus 434 Fk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG 513 (614)
...|++++|+..|+++++..|++ +.+++++|.++.++|++++|+..++++++++|+ ++.+++++|.++..+|
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~~-----~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~---~~~~l~~l~~~~~~~g 248 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSPT-----LLLLNGQAACHMAQGRWEAAEGVLQEALDKDSG---HPETLINLVVLSQHLG 248 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTT
T ss_pred hCchHHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHcC
Confidence 35689999999999999999999 999999999999999999999999999999999 9999999999999999
Q ss_pred CHHHH-HHHHHHHHHcCCCC
Q 047433 514 LGRES-LMDCIMFINGCIRS 532 (614)
Q Consensus 514 ~yeEA-L~df~kALkl~P~~ 532 (614)
+++++ ...+++++++.|++
T Consensus 249 ~~~eaa~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 249 KPPEVTNRYLSQLKDAHRSH 268 (291)
T ss_dssp CCHHHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHHHhCCCC
Confidence 99875 67889999999953
No 94
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.15 E-value=3e-09 Score=106.89 Aligned_cols=114 Identities=13% Similarity=0.112 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-cchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCC---
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRP-KNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPN--- 496 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~-~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~--- 496 (614)
..+..+...|..++..|+|++|+..|.+++++.|... ....+.++.++|.+|..+|++++|+..+++++++.|..+
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 264 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 264 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCch
Confidence 3566788999999999999999999999999876542 344566999999999999999999999999999877610
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 497 SHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 497 ~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
....+++.+|.++..+|++++|+..|++++++.+...+
T Consensus 265 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 302 (406)
T 3sf4_A 265 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELND 302 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC
Confidence 11789999999999999999999999999999765544
No 95
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.14 E-value=3.3e-09 Score=110.43 Aligned_cols=302 Identities=11% Similarity=-0.009 Sum_probs=166.6
Q ss_pred hhhcccch--hhHHHHHHHHHhhcccccCCCc----chhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCC--
Q 047433 289 LCYSKTGR--KNIAECKQVIENLCNLSRSSDD----WQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDR-- 360 (614)
Q Consensus 289 ~~~~~~~~--~aia~~~~~i~~lc~~srssd~----w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~-- 360 (614)
.++...|+ +|+..++++++......-...+ ..|..++.+...+++-+.+...++++......+........-
T Consensus 59 ~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~ 138 (472)
T 4g1t_A 59 YLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPEL 138 (472)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHH
Confidence 34566786 7999999999876544321111 345567788888999999988888887765543321100000
Q ss_pred CcCcHHHHH-------HHHHHhhhhhhh-ccCcHHHHHHHHHHHHHHHHHHHHHHhhcCC--HHHHHHHHHHHHHHHHHH
Q 047433 361 PKNLGEAIT-------RALLLDYKLTEQ-KFKNKKVQKALEEIWELKVERRKREKMMMMS--EEKVEEMRVLVGLIKQEA 430 (614)
Q Consensus 361 ~k~lGe~it-------~aLl~dy~~~~~-~p~n~e~~~aL~el~~lkvEr~erEk~~~ls--~eel~~~~~~A~~lK~~G 430 (614)
..+.|.... ......|++... .|++.++...+..+........+.++ ++. ...+...+..+..+...|
T Consensus 139 ~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~--al~~~~~al~l~p~~~~~~~~l~ 216 (472)
T 4g1t_A 139 DCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQN--AIDPLRQAIRLNPDNQYLKVLLA 216 (472)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCC--THHHHHHHHHHCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHH--HHHHHHHHhhcCCcchHHHHHHH
Confidence 001111111 011133443333 56666655544433211100000000 000 000111122233455555
Q ss_pred HHHHH----cCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHH
Q 047433 431 KHLFW----LGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRS 506 (614)
Q Consensus 431 N~lFk----~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA 506 (614)
..+.. .|++++|+..|.+++.+.|.. ..++.++|.+|...|++++|+..+++|++++|+ +..+++.+|
T Consensus 217 ~~~~~~~~~~~~~~~a~~~~~~al~~~~~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~lg 288 (472)
T 4g1t_A 217 LKLHKMREEGEEEGEGEKLVEEALEKAPGV-----TDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN---NAYLHCQIG 288 (472)
T ss_dssp HHHHHCC------CHHHHHHHHHHHHCSSC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhCccH-----HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC---hHHHHHHHH
Confidence 55443 456778888888888888887 888888888888888888888888888888888 888888888
Q ss_pred HHHHHc-------------------CCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 047433 507 QAYDMK-------------------GLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKIL 567 (614)
Q Consensus 507 ~Al~~L-------------------G~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~ 567 (614)
.+|... +.+++|+..|++++++.|.......... ......++.-++...|.+++...+
T Consensus 289 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg---~~~~~~~~~~~A~~~~~kaL~~~~ 365 (472)
T 4g1t_A 289 CCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILA---SLHALADQYEEAEYYFQKEFSKEL 365 (472)
T ss_dssp HHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHH---HHHHHTTCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHH---HHHHHhccHHHHHHHHHHHHhcCC
Confidence 877543 3467788888888888775544321111 111223333455666777766543
Q ss_pred CCCCCC---cc-CCcCCcccchhhhHHHHHHHHHHhcccc
Q 047433 568 SSPVNN---VQ-ESYGENKSGIEEQRYCDMIRTMMEKKNL 603 (614)
Q Consensus 568 ~~~~~~---~~-e~~~~~~~g~~eQ~~dD~iral~~~~~~ 603 (614)
++.... .. ........+..++++..+.+++..+|+.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~ 405 (472)
T 4g1t_A 366 TPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKS 405 (472)
T ss_dssp CHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCC
T ss_pred CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccc
Confidence 321110 00 0112234555667777778888877765
No 96
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.13 E-value=9.7e-10 Score=92.08 Aligned_cols=101 Identities=19% Similarity=0.136 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
...+...|..++..|++++|+..|.+++...|.. ..++.++|.++...|++++|+..++++++++|. +..++
T Consensus 35 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 106 (136)
T 2fo7_A 35 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS-----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR---SAEAW 106 (136)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc-----hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---ChHHH
Confidence 3457778999999999999999999999999998 899999999999999999999999999999999 89999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
+.+|.++...|++++|+..|+++++..|+
T Consensus 107 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 107 YNLGNAYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHccCCC
Confidence 99999999999999999999999999874
No 97
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.13 E-value=1.6e-09 Score=108.39 Aligned_cols=113 Identities=7% Similarity=-0.226 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCCC-cchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCc--
Q 047433 422 LVGLIKQEAKHLFWL-GEIEEAAMKYTEALGVCPSRP-KNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNS-- 497 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~-GdyeeAI~~YtkAIel~P~~~-~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~-- 497 (614)
.+..+...|..+... |++++|+..|++|+++.|... ......++.|+|.+|.++|+|++|+..++++++++|..+.
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 195 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ 195 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTG
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCccc
Confidence 466788999999996 999999999999999988542 2233578999999999999999999999999999987321
Q ss_pred --cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 498 --HCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 498 --~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
...+|+++|.++..+|++++|+..|++++++.|+..+
T Consensus 196 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 196 WSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCC
Confidence 1237899999999999999999999999999986554
No 98
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.12 E-value=6.2e-11 Score=109.94 Aligned_cols=114 Identities=7% Similarity=-0.163 Sum_probs=95.7
Q ss_pred HHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHH
Q 047433 444 MKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCI 523 (614)
Q Consensus 444 ~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~ 523 (614)
..|.++++++|++ +.+++++|.+++++|+|++|+..++++++++|. +..+|+.+|.++..+|+|++|+..|+
T Consensus 23 ~~l~~al~l~p~~-----~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~---~~~~~~~lg~~~~~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 23 ATLKDINAIPDDM-----MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY---NVDYIMGLAAIYQIKEQFQQAADLYA 94 (151)
T ss_dssp CCTGGGCCSCHHH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHhCCCHHH-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 5578899999998 999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 047433 524 MFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILS 568 (614)
Q Consensus 524 kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~ 568 (614)
++++++|++.+.. ..+. .+....++..++...|.+++...+.
T Consensus 95 ~al~l~P~~~~~~--~~lg-~~~~~lg~~~eA~~~~~~al~l~~~ 136 (151)
T 3gyz_A 95 VAFALGKNDYTPV--FHTG-QCQLRLKAPLKAKECFELVIQHSND 136 (151)
T ss_dssp HHHHHSSSCCHHH--HHHH-HHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHhhCCCCcHHH--HHHH-HHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 9999999755443 2222 2233345556677788888776643
No 99
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.12 E-value=2.1e-10 Score=105.82 Aligned_cols=109 Identities=11% Similarity=-0.007 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHH-HcCCcHHHHHHHHHHHhcCCCCCc
Q 047433 419 MRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHL-LLREPDAAISDATRALCLSNPPNS 497 (614)
Q Consensus 419 ~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~yl-kLGdyeeAI~D~~~ALeLdP~~~~ 497 (614)
.+..+..+...|..+...|++++|+..|.+++...| + +.++..++.+.+ ..++..+|+..++++++++|+
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~-----~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~--- 106 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-D-----NSYKSLIAKLELHQQAAESPELKRLEQELAANPD--- 106 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-C-----HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTT---
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-C-----hHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCC---
Confidence 445566677777777777777777777777777777 5 444444443322 333444567777888888888
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChH
Q 047433 498 HCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTS 536 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~ 536 (614)
+..+++.+|.++..+|++++|+..|+++++..|+..++.
T Consensus 107 ~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 145 (176)
T 2r5s_A 107 NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGE 145 (176)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTH
T ss_pred CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHH
Confidence 888999999999999999999999999999888655433
No 100
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.11 E-value=5.3e-10 Score=112.22 Aligned_cols=105 Identities=11% Similarity=0.012 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHH--------------------
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAIS-------------------- 483 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~-------------------- 483 (614)
..+...|..+...|++++|+..|+++++.+|++ ..++.++|.+++.+|++++|+.
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~-----~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~ 192 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQN-----GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQ 192 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSC-----HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcc-----hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHH
Confidence 356667777777777777777777777777777 7777777777777777766654
Q ss_pred --------------HHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChH
Q 047433 484 --------------DATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTS 536 (614)
Q Consensus 484 --------------D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~ 536 (614)
.++++++++|+ +..+++.+|.++...|++++|+..|+++++..|++.+..
T Consensus 193 ~~l~~~~~~~~a~~~l~~al~~~P~---~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~ 256 (287)
T 3qou_A 193 IELLXQAADTPEIQQLQQQVAENPE---DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQ 256 (287)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGH
T ss_pred HHHHhhcccCccHHHHHHHHhcCCc---cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccch
Confidence 45555666777 777777777777777777777777777777777554443
No 101
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.10 E-value=9.1e-10 Score=113.49 Aligned_cols=163 Identities=12% Similarity=-0.027 Sum_probs=130.0
Q ss_pred hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHHHHHHHHHHhh
Q 047433 297 KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLGEAITRALLLDY 376 (614)
Q Consensus 297 ~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe~it~aLl~dy 376 (614)
+|+..++.+++..++.+ ..+..++.++...++.+.+...+.+++...++...+.
T Consensus 131 ~A~~~~~~a~~~~p~~a-----~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~--------------------- 184 (336)
T 1p5q_A 131 KAKESWEMNSEEKLEQS-----TIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFS--------------------- 184 (336)
T ss_dssp CCCCGGGCCHHHHHHHH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCC---------------------
T ss_pred cccchhcCCHHHHHHHH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCC---------------------
Confidence 46666777777777777 6777778888888888888777777766654422110
Q ss_pred hhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047433 377 KLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR 456 (614)
Q Consensus 377 ~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~ 456 (614)
.... . ......+..+.+.|..+++.|+|++|+..|+++|+++|.+
T Consensus 185 --------~~~~----~-----------------------~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 229 (336)
T 1p5q_A 185 --------NEEA----Q-----------------------KAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNN 229 (336)
T ss_dssp --------SHHH----H-----------------------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred --------hHHH----H-----------------------HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 0000 0 0011235578899999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHc
Q 047433 457 PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRES-LMDCIMFING 528 (614)
Q Consensus 457 ~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEA-L~df~kALkl 528 (614)
+.+|+++|.+|..+|+|++|+.++++|++++|+ +..+++.+|.++..+|++++| ...|++++..
T Consensus 230 -----~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~---~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 230 -----EKGLSRRGEAHLAVNDFELARADFQKVLQLYPN---NKAAKTQLAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp -----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999999 4467777655
No 102
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.10 E-value=1.6e-10 Score=125.94 Aligned_cols=159 Identities=11% Similarity=0.009 Sum_probs=107.3
Q ss_pred cCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCH
Q 047433 436 LGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLG 515 (614)
Q Consensus 436 ~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~y 515 (614)
.|++++|+..|+++++.+|.+ ..++.++|.+|..+|++++|+..++++++++|+ +..+++.+|.+|..+|++
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~lg~~~~~~g~~ 73 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQD-----FVAWLMLADAELGMGDTTAGEMAVQRGLALHPG---HPEAVARLGRVRWTQQRH 73 (568)
T ss_dssp -------------------CC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT---CHHHHHHHHHHHHHTTCH
T ss_pred CccHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHCCCH
Confidence 478999999999999999999 999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCCcCCccc---chhhhHHHH
Q 047433 516 RESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPVNNVQESYGENKS---GIEEQRYCD 592 (614)
Q Consensus 516 eEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~~e~~~~~~~---g~~eQ~~dD 592 (614)
++|+..|++++++.|++. .....+. ......++..++...|.+++...+..+....+........ +..+++.+.
T Consensus 74 ~~A~~~~~~al~~~p~~~--~~~~~la-~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~ 150 (568)
T 2vsy_A 74 AEAAVLLQQASDAAPEHP--GIALWLG-HALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQ 150 (568)
T ss_dssp HHHHHHHHHHHHHCTTCH--HHHHHHH-HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCH--HHHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 999999999999998543 2222222 1222233445566777777777655443333333333444 777888888
Q ss_pred HHHHHHhcccccC
Q 047433 593 MIRTMMEKKNLIS 605 (614)
Q Consensus 593 ~iral~~~~~~~~ 605 (614)
+.+++..+|+..+
T Consensus 151 ~~~al~~~p~~~~ 163 (568)
T 2vsy_A 151 VRAAVAQGVGAVE 163 (568)
T ss_dssp HHHHHHHTCCCSC
T ss_pred HHHHHhcCCcccC
Confidence 8889988887643
No 103
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.08 E-value=6.6e-09 Score=100.50 Aligned_cols=213 Identities=15% Similarity=0.081 Sum_probs=144.1
Q ss_pred hhcccch--hhHHHHHHHHHh--------hcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccC
Q 047433 290 CYSKTGR--KNIAECKQVIEN--------LCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLD 359 (614)
Q Consensus 290 ~~~~~~~--~aia~~~~~i~~--------lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~ 359 (614)
++...|+ +|+..++++++. .+..+ ..+..++.++...++.+.+...+.+++........ ++
T Consensus 36 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~-----~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~----~~ 106 (311)
T 3nf1_A 36 QYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVA-----TMLNILALVYRDQNKYKDAANLLNDALAIREKTLG----KD 106 (311)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHC----TT
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC----CC
Confidence 4556666 799999999985 44444 67788889999999999998888888766422100 11
Q ss_pred CCcCcHHHHHHHHHHhhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCH
Q 047433 360 RPKNLGEAITRALLLDYKLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEI 439 (614)
Q Consensus 360 ~~k~lGe~it~aLl~dy~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~Gdy 439 (614)
. ........ .+-..|.. .....++...+.+...+. +... .- .....+..+...|..++..|++
T Consensus 107 ~-~~~~~~~~-~l~~~~~~---~g~~~~A~~~~~~a~~~~----~~~~--~~------~~~~~~~~~~~la~~~~~~~~~ 169 (311)
T 3nf1_A 107 H-PAVAATLN-NLAVLYGK---RGKYKEAEPLCKRALEIR----EKVL--GK------DHPDVAKQLNNLALLCQNQGKY 169 (311)
T ss_dssp C-HHHHHHHH-HHHHHHHT---TTCHHHHHHHHHHHHHHH----HHHH--CT------TCHHHHHHHHHHHHHHHTTTCH
T ss_pred C-hHHHHHHH-HHHHHHHH---cCcHHHHHHHHHHHHHHH----HHhc--CC------CChHHHHHHHHHHHHHHHcCCH
Confidence 1 11111111 11112211 111222333333322221 1110 00 0123566788999999999999
Q ss_pred HHHHHHHHHHHhhCCC---CCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc-------------------------
Q 047433 440 EEAAMKYTEALGVCPS---RPKNERMVLYSNRAQCHLLLREPDAAISDATRALCL------------------------- 491 (614)
Q Consensus 440 eeAI~~YtkAIel~P~---~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL------------------------- 491 (614)
++|+..|.+++++... ........++.++|.+|..+|++++|+..+++++++
T Consensus 170 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (311)
T 3nf1_A 170 EEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREE 249 (311)
T ss_dssp HHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHH
Confidence 9999999999998110 012233889999999999999999999999999985
Q ss_pred ------------------------CCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 492 ------------------------SNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 492 ------------------------dP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
+|. ...+++.+|.+|..+|++++|+..|++++++.|+
T Consensus 250 ~~~~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 250 CKGKQKDGTSFGEYGGWYKACKVDSPT---VTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp C-------CCSCCCC---------CHH---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred hcCchhhHHHHHHHHHHHhhcCCCCch---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 355 7889999999999999999999999999999763
No 104
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.06 E-value=9.4e-09 Score=99.26 Aligned_cols=114 Identities=13% Similarity=0.112 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC---C
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP---N 496 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~---~ 496 (614)
..+..+...|..++..|++++|+..|.+++++.+.. .......++.++|.++..+|++++|+..+++++++.+.. .
T Consensus 181 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 260 (338)
T 3ro2_A 181 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 260 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchh
Confidence 356678899999999999999999999999987653 133456699999999999999999999999999887651 0
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 497 SHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 497 ~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
....+++.+|.++..+|++++|+..|++++++.+...+
T Consensus 261 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 298 (338)
T 3ro2_A 261 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKD 298 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCC
Confidence 12778999999999999999999999999998664333
No 105
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.05 E-value=2.8e-10 Score=94.25 Aligned_cols=92 Identities=17% Similarity=0.044 Sum_probs=82.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHH-HHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHH
Q 047433 427 KQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMV-LYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRR 505 (614)
Q Consensus 427 K~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~-lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRR 505 (614)
..+|..++..|+|++|+..|+++++.+|.+ .. ++.++|.+|..+|++++|+..++++++++|+ +..++++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~- 74 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVG-----KDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPD---SPALQAR- 74 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSST-----HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---STHHHHH-
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCc-----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---cHHHHHH-
Confidence 467899999999999999999999999998 88 9999999999999999999999999999999 8888754
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 506 SQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 506 A~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
+.+.+++..|+++++.+|+...
T Consensus 75 -------~~~~~a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 75 -------KMVMDILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp -------HHHHHHHHHHCCTTHHHHCCSS
T ss_pred -------HHHHHHHHHHHHHhccCccccc
Confidence 6778889999998888875443
No 106
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.05 E-value=2.4e-09 Score=86.05 Aligned_cols=84 Identities=19% Similarity=0.164 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..++..|+|++|+..|.+++++.|.+ ..++.++|.++.++|++++|+..++++++++|. +..+
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~---~~~~ 79 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN---NAEA 79 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC---CHHH
Confidence 45678889999999999999999999999999998 999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcC
Q 047433 502 LWRRSQAYDMKG 513 (614)
Q Consensus 502 yyRRA~Al~~LG 513 (614)
++.+|.++..+|
T Consensus 80 ~~~l~~~~~~~g 91 (91)
T 1na3_A 80 KQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC
Confidence 999999998765
No 107
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.05 E-value=2.3e-10 Score=104.15 Aligned_cols=115 Identities=7% Similarity=-0.160 Sum_probs=94.4
Q ss_pred HHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHH
Q 047433 443 AMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDC 522 (614)
Q Consensus 443 I~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df 522 (614)
-..|.+++.++|.+ ...+.++|.+++..|+|++|+..+++++.++|. +..+|+.+|.++..+|++++|+..|
T Consensus 7 ~~~~~~al~~~p~~-----~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~lg~~~~~~g~~~~A~~~~ 78 (148)
T 2vgx_A 7 GGTIAMLNEISSDT-----LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY---DSRFFLGLGACRQAMGQYDLAIHSY 78 (148)
T ss_dssp CCSHHHHTTCCHHH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHcCCHhh-----HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc---cHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 34688999999998 999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 047433 523 IMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILS 568 (614)
Q Consensus 523 ~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~ 568 (614)
++++++.|++.... ..+. .+....++.-++...|..++...+.
T Consensus 79 ~~al~l~p~~~~~~--~~lg-~~~~~~g~~~~A~~~~~~al~~~p~ 121 (148)
T 2vgx_A 79 SYGAVMDIXEPRFP--FHAA-ECLLQXGELAEAESGLFLAQELIAN 121 (148)
T ss_dssp HHHHHHSTTCTHHH--HHHH-HHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCCCchHH--HHHH-HHHHHcCCHHHHHHHHHHHHHHCcC
Confidence 99999999654432 2222 2222344445666777877776654
No 108
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.05 E-value=7.5e-09 Score=105.49 Aligned_cols=114 Identities=13% Similarity=0.094 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCC---
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPN--- 496 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~--- 496 (614)
..+..+...|..++..|+|++|+..|.+++++.|.. .......++.++|.+|..+|++++|+..+++++++.|...
T Consensus 221 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 300 (411)
T 4a1s_A 221 AQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGERE 300 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHH
Confidence 355678899999999999999999999999988753 2234456899999999999999999999999999887510
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 497 SHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 497 ~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
....+++.+|.++..+|++++|+..|++++++.+...+
T Consensus 301 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 338 (411)
T 4a1s_A 301 VEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGD 338 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCC
Confidence 13688999999999999999999999999998664433
No 109
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.04 E-value=3e-10 Score=103.61 Aligned_cols=129 Identities=8% Similarity=-0.047 Sum_probs=99.1
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHH
Q 047433 429 EAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQA 508 (614)
Q Consensus 429 ~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~A 508 (614)
.++.++..|+|++|+..|.++++.+|.+ ..++.++|.+|+.+|++++|+..++++++++|. +..+++.+|.+
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~la~~ 87 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQN-----SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE---NAELYAALATV 87 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCSC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS---CHHHHHHHHHH
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC---CHHHHHHHHHH
Confidence 4455678899999999999999999999 999999999999999999999999999999999 99999999999
Q ss_pred -HHHcCCH--HHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 047433 509 -YDMKGLG--RESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILS 568 (614)
Q Consensus 509 -l~~LG~y--eEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~ 568 (614)
+...|++ ++|+..|+++++..|++. .....+. ......++..++...|.+++...+.
T Consensus 88 l~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~la-~~~~~~g~~~~A~~~~~~al~~~p~ 147 (177)
T 2e2e_A 88 LYYQASQHMTAQTRAMIDKALALDSNEI--TALMLLA-SDAFMQANYAQAIELWQKVMDLNSP 147 (177)
T ss_dssp HHHHTTTCCCHHHHHHHHHHHHHCTTCH--HHHHHHH-HHHHHTTCHHHHHHHHHHHHHTCCT
T ss_pred HHHhcCCcchHHHHHHHHHHHHhCCCcH--HHHHHHH-HHHHHcccHHHHHHHHHHHHhhCCC
Confidence 8899999 999999999999988533 2221111 1111223334555667777665543
No 110
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.03 E-value=2.3e-09 Score=102.83 Aligned_cols=106 Identities=8% Similarity=0.022 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHH------------------cCCcHHHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLL------------------LREPDAAISD 484 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylk------------------LGdyeeAI~D 484 (614)
...+...|..+++.|+|++|+..|+++++..|++ .....++.++|.++.. +|++++|+..
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~--~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 118 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH--PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSD 118 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--TTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCC--CcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHH
Confidence 3478889999999999999999999999999986 2334588999999987 5799999999
Q ss_pred HHHHHhcCCCCCccHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 485 ATRALCLSNPPNSHCKSL-----------------WRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 485 ~~~ALeLdP~~~~~~KAy-----------------yRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
++++++.+|+ +..+. +.+|.+|...|++++|+..|+++++..|+++
T Consensus 119 ~~~~l~~~P~---~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 119 FSKLVRGYPN---SQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp HHHHHTTCTT---CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHHHCcC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC
Confidence 9999999999 54332 6789999999999999999999999999643
No 111
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.99 E-value=1.8e-09 Score=110.71 Aligned_cols=111 Identities=13% Similarity=-0.003 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHh-----cC-CC
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALC-----LS-NP 494 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALe-----Ld-P~ 494 (614)
.+..+...|..+...|+|++|+..|.+|+++.|.. .....+.++.|+|.+|..+|++++|+..+++|++ .+ |.
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~ 262 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPS 262 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchh
Confidence 45678899999999999999999999999987653 2345667999999999999999999999999999 46 66
Q ss_pred CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCCh
Q 047433 495 PNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETT 535 (614)
Q Consensus 495 ~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~ 535 (614)
...+++.+|.++..+|++++|+..|++++++.+...++
T Consensus 263 ---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 300 (383)
T 3ulq_A 263 ---LPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDV 300 (383)
T ss_dssp ---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred ---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCH
Confidence 88999999999999999999999999999997644443
No 112
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.99 E-value=2.9e-09 Score=106.53 Aligned_cols=146 Identities=11% Similarity=-0.060 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-cchhHHHHHHHHHHHHHc-CCcHHHHHHHHHHHhcCCCCCc--
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRP-KNERMVLYSNRAQCHLLL-REPDAAISDATRALCLSNPPNS-- 497 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~-~~~~a~lysNRA~~ylkL-GdyeeAI~D~~~ALeLdP~~~~-- 497 (614)
.+..+.+.|+.+...|+|++|+..|++||++.|... ....+.++.|+|.+|... |++++|+..+++|+++.|..+.
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~ 155 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChH
Confidence 466889999999999999999999999999987532 223467899999999995 9999999999999999886211
Q ss_pred -cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhh-----cchHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 047433 498 -HCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKR-----VKIPYYAARMISKHMNALWVFGGARSKILS 568 (614)
Q Consensus 498 -~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k-----~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~ 568 (614)
...++.++|.++..+|++++|+..|++++++.|+....... ..+. .+....++..++...|.+++..++.
T Consensus 156 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg-~~~~~~g~~~~A~~~~~~al~l~p~ 231 (292)
T 1qqe_A 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKG-LCQLAATDAVAAARTLQEGQSEDPN 231 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHH-HHHHHTTCHHHHHHHHHGGGCC---
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHH-HHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 15689999999999999999999999999999876543111 0111 1111223344566677777765543
No 113
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.98 E-value=2.1e-08 Score=95.04 Aligned_cols=206 Identities=15% Similarity=0.046 Sum_probs=136.2
Q ss_pred hhHHHHHHHHHhhcccccCC---CcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHHHHHHHHH
Q 047433 297 KNIAECKQVIENLCNLSRSS---DDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLGEAITRALL 373 (614)
Q Consensus 297 ~aia~~~~~i~~lc~~srss---d~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe~it~aLl 373 (614)
+|+..++++++.+-.+.... .-..+..++.++...++.+.+...+.+++...... .+++......... .+-
T Consensus 19 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~~-~l~ 92 (283)
T 3edt_B 19 SAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKT-----LGKDHPAVAATLN-NLA 92 (283)
T ss_dssp SHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCTTCHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH-----cCCcchHHHHHHH-HHH
Confidence 68888888888664443111 12567778888888999998888888876654211 0111011111111 111
Q ss_pred HhhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-
Q 047433 374 LDYKLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGV- 452 (614)
Q Consensus 374 ~dy~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel- 452 (614)
..|.. .-.-.++...+.+..... +... .- ..+..+..+...|..++..|++++|+..|.+++++
T Consensus 93 ~~~~~---~g~~~~A~~~~~~al~~~----~~~~--~~------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 93 VLYGK---RGKYKEAEPLCKRALEIR----EKVL--GK------FHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp HHHHT---TTCHHHHHHHHHHHHHHH----HHHH--CT------TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHH---hccHHHHHHHHHHHHHHH----HHHc--CC------CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 11211 111222222223222221 1110 00 01235668999999999999999999999999998
Q ss_pred -------CCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCC--------------------------------
Q 047433 453 -------CPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSN-------------------------------- 493 (614)
Q Consensus 453 -------~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP-------------------------------- 493 (614)
.|.. ..++.++|.+|..+|++++|+..+++++++.|
T Consensus 158 ~~~~~~~~~~~-----~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T 3edt_B 158 ATRLGPDDPNV-----AKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSA 232 (283)
T ss_dssp HHHSCTTCHHH-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC--
T ss_pred HHhcCCCCHHH-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHH
Confidence 4444 88999999999999999999999999998621
Q ss_pred --------------CCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 047433 494 --------------PPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFING 528 (614)
Q Consensus 494 --------------~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl 528 (614)
..+....+++.+|.+|..+|++++|+..|+++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 233 PYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp ----------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 11126778999999999999999999999999986
No 114
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.98 E-value=1.9e-08 Score=100.93 Aligned_cols=88 Identities=10% Similarity=-0.188 Sum_probs=48.0
Q ss_pred cCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc---CC-CCCccHHHHHHHHHHHHH
Q 047433 436 LGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCL---SN-PPNSHCKSLWRRSQAYDM 511 (614)
Q Consensus 436 ~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL---dP-~~~~~~KAyyRRA~Al~~ 511 (614)
.|++++|+..|+++|+.+|++ +.+|.+++..+.++|++++|+..++++++. +| . ....|...+..+..
T Consensus 182 ~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~---~~~l~~~~~~~~~~ 253 (308)
T 2ond_A 182 SKDKSVAFKIFELGLKKYGDI-----PEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK---SGEIWARFLAFESN 253 (308)
T ss_dssp SCCHHHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGG---CHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHH---HHHHHHHHHHHHHH
Confidence 455555555555555555555 555555555555555555555555555553 22 2 34445555555555
Q ss_pred cCCHHHHHHHHHHHHHcCCC
Q 047433 512 KGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 512 LG~yeEAL~df~kALkl~P~ 531 (614)
.|++++|...++++++..|+
T Consensus 254 ~g~~~~a~~~~~~a~~~~p~ 273 (308)
T 2ond_A 254 IGDLASILKVEKRRFTAFRE 273 (308)
T ss_dssp HSCHHHHHHHHHHHHHHTTT
T ss_pred cCCHHHHHHHHHHHHHHccc
Confidence 55555555555555555553
No 115
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.98 E-value=1.8e-09 Score=103.10 Aligned_cols=128 Identities=11% Similarity=-0.136 Sum_probs=99.8
Q ss_pred HHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcC
Q 047433 434 FWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKG 513 (614)
Q Consensus 434 Fk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG 513 (614)
...|+|++|+..|+++++..|.. +...+.++.++|.++..+|++++|+..++++++++|. +..+++.+|.++..+|
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~~~la~~~~~~~ 91 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASRALT-DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD---MPEVFNYLGIYLTQAG 91 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHTT
T ss_pred CccchHHHHHHHHHHHHhccccc-CchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC---cHHHHHHHHHHHHHcc
Confidence 34578999999999999986532 3345899999999999999999999999999999999 9999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 047433 514 LGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILS 568 (614)
Q Consensus 514 ~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~ 568 (614)
++++|+..|++++++.|++.... ..+. ......++..++...|.+++...+.
T Consensus 92 ~~~~A~~~~~~al~~~~~~~~~~--~~la-~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (275)
T 1xnf_A 92 NFDAAYEAFDSVLELDPTYNYAH--LNRG-IALYYGGRDKLAQDDLLAFYQDDPN 143 (275)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHH--HHHH-HHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHhcCccccHHH--HHHH-HHHHHhccHHHHHHHHHHHHHhCCC
Confidence 99999999999999998644322 2221 1111223334455666666665533
No 116
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.96 E-value=2.1e-08 Score=96.79 Aligned_cols=110 Identities=15% Similarity=0.145 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC---Cc
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP---NS 497 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~---~~ 497 (614)
.+..+...|..++..|++++|+..|.+++++.|.. .......++.++|.+|..+|++++|+..+++++++.+.. ..
T Consensus 222 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 301 (338)
T 3ro2_A 222 ERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIG 301 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHH
Confidence 46688999999999999999999999999987653 234557899999999999999999999999999986641 11
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 498 HCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
...+++.+|.++..+|++++|+..|++++++.+.
T Consensus 302 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 302 EGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 3568999999999999999999999999999763
No 117
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.96 E-value=2.6e-08 Score=100.02 Aligned_cols=113 Identities=14% Similarity=0.136 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC---Cc
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP---NS 497 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~---~~ 497 (614)
.+..+...|..++..|++++|+..|.+++++.|.. .......++.++|.+|..+|++++|+..+++++++.+.. ..
T Consensus 226 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 305 (406)
T 3sf4_A 226 ERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIG 305 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHH
Confidence 46688999999999999999999999999987653 234457899999999999999999999999999986541 11
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 498 HCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
...++..+|.++..+|++++|+..|++++++.+...+
T Consensus 306 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 342 (406)
T 3sf4_A 306 EGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGD 342 (406)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcC
Confidence 3779999999999999999999999999999664443
No 118
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.95 E-value=7.7e-09 Score=91.36 Aligned_cols=99 Identities=10% Similarity=-0.044 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|..++..|+|++|+..|.++++++|.+ ..++.++|.++..+|++++|+..+.++++++|. +..++
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~---~~~~~ 118 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY-----IKGYYRRAASNMALGKFRAALRDYETVVKVKPH---DKDAK 118 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-----HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC---CHHHH
Confidence 4578889999999999999999999999999999 999999999999999999999999999999999 88777
Q ss_pred --HHHHHHHHHcCCHHHHHHHHHHHHHcC
Q 047433 503 --WRRSQAYDMKGLGRESLMDCIMFINGC 529 (614)
Q Consensus 503 --yRRA~Al~~LG~yeEAL~df~kALkl~ 529 (614)
+.++..+...|++++|+..+.++..+.
T Consensus 119 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 119 MKYQECNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchHHHh
Confidence 455555888999999999999887764
No 119
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.95 E-value=6.9e-09 Score=89.67 Aligned_cols=113 Identities=13% Similarity=0.128 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC---Cc
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP---NS 497 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~---~~ 497 (614)
.+..+...|..++..|+|++|+..|.+++++.+.. .......++.++|.+|..+|++++|+..+++++++.+.. ..
T Consensus 8 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 87 (164)
T 3ro3_A 8 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 87 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHH
Confidence 56788999999999999999999999999987642 234556799999999999999999999999999886541 11
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 498 HCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
...+++.+|.++..+|++++|+..+++++++.+...+
T Consensus 88 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 124 (164)
T 3ro3_A 88 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKD 124 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccc
Confidence 2678999999999999999999999999998654433
No 120
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.94 E-value=5.9e-09 Score=112.15 Aligned_cols=162 Identities=14% Similarity=0.006 Sum_probs=122.6
Q ss_pred hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHhccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcHHHHHHHHHHhh
Q 047433 297 KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFLLKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLGEAITRALLLDY 376 (614)
Q Consensus 297 ~aia~~~~~i~~lc~~srssd~w~y~~idcll~Llkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lGe~it~aLl~dy 376 (614)
+|+..++.+++..++.+ ..+...+..+...++.+.+...+.+++...++...+
T Consensus 252 ~A~~~~~~~~~~~~~~a-----~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~---------------------- 304 (457)
T 1kt0_A 252 KAKESWEMDTKEKLEQA-----AIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGL---------------------- 304 (457)
T ss_dssp CCCCGGGSCHHHHHHHH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSC----------------------
T ss_pred cCcchhhcCHHHHHHHH-----HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccC----------------------
Confidence 46666667777777777 777777888888888887777777776655432110
Q ss_pred hhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047433 377 KLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR 456 (614)
Q Consensus 377 ~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~ 456 (614)
..+.. . . .....+..+.+.|..+++.|+|++|+..|+++|+++|++
T Consensus 305 --------~~~~~---~---~--------------------~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 350 (457)
T 1kt0_A 305 --------SEKES---K---A--------------------SESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSAN 350 (457)
T ss_dssp --------CHHHH---H---H--------------------HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred --------ChHHH---H---H--------------------HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc
Confidence 00000 0 0 011234578899999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHH-HHHHHH
Q 047433 457 PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMD-CIMFIN 527 (614)
Q Consensus 457 ~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~d-f~kALk 527 (614)
+.+|++||.+|+.+|+|++|+.++++|++++|+ +..++..++.++..+|++++|.+. |++++.
T Consensus 351 -----~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~---~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f~ 414 (457)
T 1kt0_A 351 -----EKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQ---NKAARLQISMCQKKAKEHNERDRRIYANMFK 414 (457)
T ss_dssp -----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred -----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999 999999999999999999988764 444443
No 121
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.94 E-value=3.4e-09 Score=106.45 Aligned_cols=225 Identities=8% Similarity=-0.085 Sum_probs=144.1
Q ss_pred HHHHHhhhhhhh-ccCcHHHHHHHHHHHHHHH------HHH-------HHHHhhcCCHHHHH-HHHHHHHHHHHHHHHHH
Q 047433 370 RALLLDYKLTEQ-KFKNKKVQKALEEIWELKV------ERR-------KREKMMMMSEEKVE-EMRVLVGLIKQEAKHLF 434 (614)
Q Consensus 370 ~aLl~dy~~~~~-~p~n~e~~~aL~el~~lkv------Er~-------erEk~~~ls~eel~-~~~~~A~~lK~~GN~lF 434 (614)
+.....|+.... .|.+.++.-.+..+..... .+. +... ..-...+. ..+..+..|...|..+.
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~--~~~~rAl~~~~p~~~~~~~~~~~~~~ 110 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAA--NIYERAISTLLKKNMLLYFAYADYEE 110 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH--HHHHHHHTTTTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHH--HHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 344467777666 7888888777666543110 000 1111 11111122 12334567888888888
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCCcchhHH-HHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHH-c
Q 047433 435 WLGEIEEAAMKYTEALGVCPSRPKNERMV-LYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDM-K 512 (614)
Q Consensus 435 k~GdyeeAI~~YtkAIel~P~~~~~~~a~-lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~-L 512 (614)
..|++++|+..|+++|++.|.+ .. +|.+++.++.+.|++++|+..+++|++++|. +..+|...+..... +
T Consensus 111 ~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~---~~~~~~~~a~~~~~~~ 182 (308)
T 2ond_A 111 SRMKYEKVHSIYNRLLAIEDID-----PTLVYIQYMKFARRAEGIKSGRMIFKKAREDART---RHHVYVTAALMEYYCS 182 (308)
T ss_dssp HTTCHHHHHHHHHHHHTSSSSC-----THHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC---CTHHHHHHHHHHHHTS
T ss_pred hcCCHHHHHHHHHHHHhccccC-----ccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC---CHHHHHHHHHHHHHHc
Confidence 9999999999999999998887 65 8999999999999999999999999999998 77787766655443 7
Q ss_pred CCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc----cCCcCCcccchhhh
Q 047433 513 GLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPVNNV----QESYGENKSGIEEQ 588 (614)
Q Consensus 513 G~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~----~e~~~~~~~g~~eQ 588 (614)
|++++|...|+++++..|++ +.....+..+ ....++..++...|.+++....-+|.... .-..-....|..++
T Consensus 183 ~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~-~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~ 259 (308)
T 2ond_A 183 KDKSVAFKIFELGLKKYGDI--PEYVLAYIDY-LSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLAS 259 (308)
T ss_dssp CCHHHHHHHHHHHHHHHTTC--HHHHHHHHHH-HHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCc--HHHHHHHHHH-HHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 99999999999999998853 3322222111 11123345667788888775321111111 11222344566667
Q ss_pred HHHHHHHHHHhcccccCCc
Q 047433 589 RYCDMIRTMMEKKNLISGK 607 (614)
Q Consensus 589 ~~dD~iral~~~~~~~~g~ 607 (614)
......|++...|+...+.
T Consensus 260 a~~~~~~a~~~~p~~~~~~ 278 (308)
T 2ond_A 260 ILKVEKRRFTAFREEYEGK 278 (308)
T ss_dssp HHHHHHHHHHHTTTTTSSC
T ss_pred HHHHHHHHHHHcccccccc
Confidence 7777788888888755443
No 122
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.93 E-value=2.5e-09 Score=90.56 Aligned_cols=76 Identities=12% Similarity=0.001 Sum_probs=68.4
Q ss_pred hCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 452 VCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 452 l~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
.+|++ +.++.++|.+|+.+|+|++|+..++++++++|+ +..+|+.+|.+|..+|++++|+..|++++++.|+
T Consensus 2 ~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 2 EDPED-----PFTRYALAQEHLKHDNASRALALFEELVETDPD---YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp ---CC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCccC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 36777 999999999999999999999999999999999 9999999999999999999999999999999775
Q ss_pred CCCh
Q 047433 532 SETT 535 (614)
Q Consensus 532 ~~D~ 535 (614)
..+.
T Consensus 74 ~~~~ 77 (100)
T 3ma5_A 74 EGTQ 77 (100)
T ss_dssp HSCH
T ss_pred CCch
Confidence 4443
No 123
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.93 E-value=1.3e-09 Score=97.23 Aligned_cols=113 Identities=11% Similarity=-0.089 Sum_probs=89.1
Q ss_pred HHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHH
Q 047433 444 MKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCI 523 (614)
Q Consensus 444 ~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~ 523 (614)
..|.++++++|.+ ...+.++|.+++..|+|++|+..+++++.++|. +..+|+.+|.++..+|++++|+..|+
T Consensus 5 ~~l~~al~~~p~~-----~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~ 76 (142)
T 2xcb_A 5 GTLAMLRGLSEDT-----LEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY---DARYFLGLGACRQSLGLYEQALQSYS 76 (142)
T ss_dssp ----CCTTCCHHH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhHHHHHcCCHHH-----HHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc---cHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4678888999988 999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 047433 524 MFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKIL 567 (614)
Q Consensus 524 kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~ 567 (614)
++++++|++.... ..+. .+....++.-++...|..++...+
T Consensus 77 ~al~~~p~~~~~~--~~lg-~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 77 YGALMDINEPRFP--FHAA-ECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp HHHHHCTTCTHHH--HHHH-HHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCcHHH--HHHH-HHHHHcCCHHHHHHHHHHHHHhCC
Confidence 9999999654332 2222 122223344456667777776654
No 124
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.92 E-value=3.8e-09 Score=93.47 Aligned_cols=71 Identities=8% Similarity=0.017 Sum_probs=67.0
Q ss_pred hhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 460 ERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 460 ~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
+.+.++.|+|.++++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++++++.|+..
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~---~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS---NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 45789999999999999999999999999999999 999999999999999999999999999999987543
No 125
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.91 E-value=4.6e-08 Score=98.46 Aligned_cols=112 Identities=8% Similarity=-0.062 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-cchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCc---
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRP-KNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNS--- 497 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~-~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~--- 497 (614)
.+..+.+.|..+.. |+|++|+..|++|+++.|... ......++.|+|.+|.++|+|++|+..+++++++.|..+.
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 193 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPT 193 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhH
Confidence 46678899999988 999999999999999987532 2345689999999999999999999999999998765211
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCCh
Q 047433 498 HCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETT 535 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~ 535 (614)
...+++.+|.++..+|++++|+..|++++ +.|...+.
T Consensus 194 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~ 230 (307)
T 2ifu_A 194 CYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGS 230 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCC
Confidence 13588999999999999999999999999 98865543
No 126
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.89 E-value=4.8e-08 Score=99.51 Aligned_cols=109 Identities=17% Similarity=0.160 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC---Cc
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP---NS 497 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~---~~ 497 (614)
.+..+...|..++..|++++|+..|.+++++.|.. .......++.++|.+|..+|++++|+..+++++++.+.. ..
T Consensus 262 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 341 (411)
T 4a1s_A 262 ERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIG 341 (411)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHH
Confidence 45678899999999999999999999999988753 233457899999999999999999999999999986541 11
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 498 HCKSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
...+++.+|.+|..+|++++|+..|++++++.+
T Consensus 342 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 374 (411)
T 4a1s_A 342 EARACWSLGNAHSAIGGHERALKYAEQHLQLAX 374 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 356999999999999999999999999999975
No 127
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.87 E-value=1.1e-08 Score=103.37 Aligned_cols=164 Identities=10% Similarity=-0.052 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..+...|++++|+..|.+ |.+ ..++.+++.+|.++|++++|+..++++++++|+ +..
T Consensus 100 ~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~-----~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~---~~~- 165 (291)
T 3mkr_A 100 NTTFLLMAASIYFYDQNPDAALRTLHQ-----GDS-----LECMAMTVQILLKLDRLDLARKELKKMQDQDED---ATL- 165 (291)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCS-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH-
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCC-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC---cHH-
Confidence 456677788888888888888888877 666 778888888888888888888888888888887 543
Q ss_pred HHHHHHHHH----HcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccCC
Q 047433 502 LWRRSQAYD----MKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILSSPVNNVQES 577 (614)
Q Consensus 502 yyRRA~Al~----~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~~~~~~~~e~ 577 (614)
.+.+.++. ..|++++|+..|+++++..|+ ++.....+. ......++.-++...|.+++..++..+....+..
T Consensus 166 -~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~--~~~~~~~la-~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~ 241 (291)
T 3mkr_A 166 -TQLATAWVSLAAGGEKLQDAYYIFQEMADKCSP--TLLLLNGQA-ACHMAQGRWEAAEGVLQEALDKDSGHPETLINLV 241 (291)
T ss_dssp -HHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCC--CHHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred -HHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCC--cHHHHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 33333332 337888888888888888774 333222222 1222344445666777777777766555544444
Q ss_pred cCCcccchhhhHH-HHHHHHHHhcccc
Q 047433 578 YGENKSGIEEQRY-CDMIRTMMEKKNL 603 (614)
Q Consensus 578 ~~~~~~g~~eQ~~-dD~iral~~~~~~ 603 (614)
......|...++. ....+++..+|+.
T Consensus 242 ~~~~~~g~~~eaa~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 242 VLSQHLGKPPEVTNRYLSQLKDAHRSH 268 (291)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhCCCC
Confidence 4444455554443 3444566666654
No 128
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.85 E-value=3.5e-08 Score=81.87 Aligned_cols=71 Identities=7% Similarity=-0.060 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCCh
Q 047433 462 MVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETT 535 (614)
Q Consensus 462 a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~ 535 (614)
+..+.++|.+++..|+|++|+..++++++++|. +..+++++|.++..+|++++|+..|++++++.|++.+.
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 74 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ---NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHV 74 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHH
Confidence 678999999999999999999999999999999 99999999999999999999999999999999976443
No 129
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.85 E-value=2.8e-08 Score=94.16 Aligned_cols=105 Identities=13% Similarity=-0.016 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-----CCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc----
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVC-----PSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCL---- 491 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~-----P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL---- 491 (614)
..+..+...|..++..|++++|+..|.+++++. |+ ......++.++|.+|..+|++++|+..+++++++
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~--~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF--HPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 356689999999999999999999999999983 21 1233899999999999999999999999999999
Q ss_pred ----CCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 492 ----SNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 492 ----dP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
+|. ...+++.+|.++..+|++++|+..|++++++.|
T Consensus 161 ~~~~~~~---~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 161 LGPDDPN---VAKTKNNLASCYLKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp SCTTCHH---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cCCCCHH---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 676 889999999999999999999999999999854
No 130
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.84 E-value=1.2e-08 Score=113.79 Aligned_cols=166 Identities=14% Similarity=0.042 Sum_probs=110.2
Q ss_pred HHHHHHHcCCH-HHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCC----------cHHHHHHHHHHHhcCCCCCc
Q 047433 429 EAKHLFWLGEI-EEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLRE----------PDAAISDATRALCLSNPPNS 497 (614)
Q Consensus 429 ~GN~lFk~Gdy-eeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGd----------yeeAI~D~~~ALeLdP~~~~ 497 (614)
...+..+.|+| ++|+..|+++|.++|++ ..+|++|+.++.++|+ +++|+..++++++.+|+
T Consensus 34 ~~~~~~~~~~~~eeal~~~~~~l~~nP~~-----~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK--- 105 (567)
T 1dce_A 34 AVFQKRQAGELDESVLELTSQILGANPDF-----ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK--- 105 (567)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT---
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHCchh-----HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC---
Confidence 33344556665 57788899999999988 8889999999888888 88899999999999998
Q ss_pred cHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHH-HHHHHHHHHhhhhhcCCCCCCCCc
Q 047433 498 HCKSLWRRSQAYDMKG--LGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMIS-KHMNALWVFGGARSKILSSPVNNV 574 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG--~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~-Kqmea~~lF~~Ai~k~~~~~~~~~ 574 (614)
+..+|+.|+.++..+| +++++++.+.++++.+|++..+-... . ++...++ ...++...+.+++..++.......
T Consensus 106 ~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R--~-~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~ 182 (567)
T 1dce_A 106 SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYR--R-FVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 182 (567)
T ss_dssp CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHH--H-HHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHH
T ss_pred CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHH--H-HHHHHcCCChHHHHHHHHHHHHHCCCCccHHH
Confidence 8899999999998888 66899999999999877432221111 1 1111111 112233344556655544321111
Q ss_pred cCCc--------------CCcccchhhhHHHHHHHHHHhcccccC
Q 047433 575 QESY--------------GENKSGIEEQRYCDMIRTMMEKKNLIS 605 (614)
Q Consensus 575 ~e~~--------------~~~~~g~~eQ~~dD~iral~~~~~~~~ 605 (614)
+... +....+.-+++++.+.++|..+|+..+
T Consensus 183 ~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~s 227 (567)
T 1dce_A 183 YRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQS 227 (567)
T ss_dssp HHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSH
T ss_pred HHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCcc
Confidence 1000 011235567889999999999998765
No 131
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.84 E-value=1.6e-08 Score=84.73 Aligned_cols=85 Identities=15% Similarity=-0.009 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|..++..|++++|+..|.++++..|.+ ..++.++|.++..+|++++|+..++++++++|+ +..++
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~---~~~~~ 117 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY-----SKAYGRMGLALSSLNKHVEAVAYYKKALELDPD---NETYK 117 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CHHHH
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC-----HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCcc---chHHH
Confidence 4578899999999999999999999999999998 999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHcCCH
Q 047433 503 WRRSQAYDMKGLG 515 (614)
Q Consensus 503 yRRA~Al~~LG~y 515 (614)
+.+|.++..+|++
T Consensus 118 ~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 118 SNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999986
No 132
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.79 E-value=3.3e-08 Score=90.91 Aligned_cols=81 Identities=10% Similarity=-0.035 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCcc--HHHHHHHHHHHHHcCCHHH
Q 047433 440 EEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSH--CKSLWRRSQAYDMKGLGRE 517 (614)
Q Consensus 440 eeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~--~KAyyRRA~Al~~LG~yeE 517 (614)
.+|+..|.++++++|++ ..++.++|.++..+|++++|+..++++++++|+ + ..+++.+|.++..+|++++
T Consensus 91 ~~a~~~~~~al~~~P~~-----~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~---~~~~~a~~~l~~~~~~~g~~~~ 162 (176)
T 2r5s_A 91 SPELKRLEQELAANPDN-----FELACELAVQYNQVGRDEEALELLWNILKVNLG---AQDGEVKKTFMDILSALGQGNA 162 (176)
T ss_dssp CHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT---TTTTHHHHHHHHHHHHHCSSCH
T ss_pred chHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc---cChHHHHHHHHHHHHHhCCCCc
Confidence 35799999999999999 999999999999999999999999999999997 5 5699999999999999999
Q ss_pred HHHHHHHHHHc
Q 047433 518 SLMDCIMFING 528 (614)
Q Consensus 518 AL~df~kALkl 528 (614)
|+..|++++..
T Consensus 163 A~~~y~~al~~ 173 (176)
T 2r5s_A 163 IASKYRRQLYS 173 (176)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 133
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.79 E-value=4.5e-08 Score=98.13 Aligned_cols=95 Identities=8% Similarity=-0.066 Sum_probs=87.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCcc--HHHHH
Q 047433 426 IKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSH--CKSLW 503 (614)
Q Consensus 426 lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~--~KAyy 503 (614)
....+..+...+++++|+..|.++++.+|++ ..++.++|.+|...|++++|+..+.++++++|+ + ..++.
T Consensus 188 ~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~-----~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~---~~~~~a~~ 259 (287)
T 3qou_A 188 GLVAQIELLXQAADTPEIQQLQQQVAENPED-----AALATQLALQLHQVGRNEEALELLFGHLRXDLT---AADGQTRX 259 (287)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---GGGGHHHH
T ss_pred HHHHHHHHHhhcccCccHHHHHHHHhcCCcc-----HHHHHHHHHHHHHcccHHHHHHHHHHHHhcccc---cccchHHH
Confidence 4445566667788899999999999999999 999999999999999999999999999999999 8 89999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHc
Q 047433 504 RRSQAYDMKGLGRESLMDCIMFING 528 (614)
Q Consensus 504 RRA~Al~~LG~yeEAL~df~kALkl 528 (614)
+++.++..+|+.++|+..|++++..
T Consensus 260 ~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 260 TFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999864
No 134
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.78 E-value=1e-08 Score=102.63 Aligned_cols=137 Identities=17% Similarity=0.110 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCc----
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNS---- 497 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~---- 497 (614)
.+..+...|..++..|+|++|+..|+++++++|++ ..+++++|.+|..+|++++|+..++++++++|+.+.
T Consensus 37 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~ 111 (281)
T 2c2l_A 37 VAVYYTNRALCYLKMQQPEQALADCRRALELDGQS-----VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGD 111 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHH
Confidence 45578899999999999999999999999999999 999999999999999999999999999999986310
Q ss_pred cHHHHHHHHHH----------------------HHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHH
Q 047433 498 HCKSLWRRSQA----------------------YDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNA 555 (614)
Q Consensus 498 ~~KAyyRRA~A----------------------l~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea 555 (614)
......+++.. ....|++++|++.+++++++.|+ +......+.....+..++..++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~~~~~~~~~~a 189 (281)
T 2c2l_A 112 DIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHED--DGHIRAQQACIEAKHDKYMADM 189 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHTTTSGGGTTTSC--HHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--hhhhhhHHHHHHHHHHHHHHHH
Confidence 11122222211 12368999999999999999883 2222333332222222333445
Q ss_pred HHHHhhhhhc
Q 047433 556 LWVFGGARSK 565 (614)
Q Consensus 556 ~~lF~~Ai~k 565 (614)
...|..+...
T Consensus 190 ~~~f~~a~~~ 199 (281)
T 2c2l_A 190 DELFSQVDEK 199 (281)
T ss_dssp HHHHHHSSCT
T ss_pred HHHHHhhhcc
Confidence 6677776554
No 135
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.78 E-value=2.9e-08 Score=89.69 Aligned_cols=86 Identities=15% Similarity=0.084 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccH
Q 047433 420 RVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHC 499 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~ 499 (614)
+..+..+.+.|..+++.|+|++|+..|+++|+++|.+ +.+|.++|.+|..+|+|++|+.+++++++++|+ +.
T Consensus 60 ~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~-----~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~---~~ 131 (162)
T 3rkv_A 60 RKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETN-----EKALFRRAKARIAAWKLDEAEEDLKLLLRNHPA---AA 131 (162)
T ss_dssp HTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG---GH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcc-----hHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCC---CH
Confidence 3466789999999999999999999999999999999 999999999999999999999999999999999 77
Q ss_pred -HHHHHHHHHHHHcC
Q 047433 500 -KSLWRRSQAYDMKG 513 (614)
Q Consensus 500 -KAyyRRA~Al~~LG 513 (614)
.....++.+...++
T Consensus 132 ~~~~~~l~~~~~~~~ 146 (162)
T 3rkv_A 132 SVVAREMKIVTERRA 146 (162)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 44545555554443
No 136
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.78 E-value=1.7e-08 Score=103.44 Aligned_cols=109 Identities=6% Similarity=-0.119 Sum_probs=78.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCC----ccHH
Q 047433 426 IKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPN----SHCK 500 (614)
Q Consensus 426 lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~----~~~K 500 (614)
+...|..++..|+|++|+..|.+|+++.... .....+.++.++|.+|..+|++++|+..+.+|+++.+..+ ....
T Consensus 106 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 185 (383)
T 3ulq_A 106 NFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQ 185 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHH
Confidence 3447888888888888888888888773321 1233577888888888888888888888888887744311 1346
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 501 SLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 501 AyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
++..+|.++..+|++++|+..|++++++.|...+
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 219 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ 219 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 7788888888888888888888888887665444
No 137
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.78 E-value=3.5e-08 Score=90.23 Aligned_cols=113 Identities=7% Similarity=-0.087 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc---CCCCC-
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALCL---SNPPN- 496 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL---dP~~~- 496 (614)
.+..+...|..++..|+|++|+..|.+++++.... .....+.++.++|.+|..+|++++|+..+.+++++ .++.+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 104 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPL 104 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHH
Confidence 45578888999999999999999999999865332 23345788999999999999999999999999988 33210
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 497 SHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 497 ~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
....+++.+|.++..+|++++|+..+++++++.+...+
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 142 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADD 142 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccc
Confidence 14678889999999999999999999999987554334
No 138
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.77 E-value=4.5e-09 Score=114.06 Aligned_cols=107 Identities=9% Similarity=-0.081 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..+++.|+|++|+..|++|++++|.+ +.++.|+|.+|..+|++++|+..+++|++++|+ +..+
T Consensus 39 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~-----~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~---~~~~ 110 (477)
T 1wao_1 39 NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKY-----IKGYYRRAASNMALGKFRAALRDYETVVKVKPH---DKDA 110 (477)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT---CTTH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHH
Confidence 35688999999999999999999999999999999 999999999999999999999999999999999 8889
Q ss_pred HHHHHHH--HHHcCCHHHHHHHHH-----------HHHHcCCCCCChH
Q 047433 502 LWRRSQA--YDMKGLGRESLMDCI-----------MFINGCIRSETTS 536 (614)
Q Consensus 502 yyRRA~A--l~~LG~yeEAL~df~-----------kALkl~P~~~D~~ 536 (614)
+..++.+ +..+|++++|+..++ ++++..|+...+.
T Consensus 111 ~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 158 (477)
T 1wao_1 111 KMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPK 158 (477)
T ss_dssp HHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccccccc
Confidence 9999988 889999999999999 8888888765543
No 139
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.77 E-value=3.4e-08 Score=85.16 Aligned_cols=83 Identities=16% Similarity=0.055 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcC------CCC
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLS------NPP 495 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLd------P~~ 495 (614)
.+..+...|..++..|+|++|+..|+++++++|++ ..+|.++|.++..+|++++|+..++++++++ |.
T Consensus 37 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~- 110 (126)
T 3upv_A 37 DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF-----VRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSS- 110 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTT-
T ss_pred ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchh-
Confidence 45689999999999999999999999999999999 9999999999999999999999999999999 88
Q ss_pred CccHHHHHHHHHHHHHc
Q 047433 496 NSHCKSLWRRSQAYDMK 512 (614)
Q Consensus 496 ~~~~KAyyRRA~Al~~L 512 (614)
+..++..++.+...+
T Consensus 111 --~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 111 --AREIDQLYYKASQQR 125 (126)
T ss_dssp --HHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHHhh
Confidence 888888888776553
No 140
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.76 E-value=1.7e-08 Score=82.75 Aligned_cols=71 Identities=13% Similarity=-0.075 Sum_probs=67.5
Q ss_pred CCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 453 CPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 453 ~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
+|++ +.++.++|.+++..|++++|+..++++++++|. +..+++.+|.++..+|++++|+..|+++++..|+
T Consensus 2 ~p~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 2 VDQN-----PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE---ESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCSS-----TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCc-----HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 5666 788999999999999999999999999999999 9999999999999999999999999999999885
No 141
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.76 E-value=3e-08 Score=92.52 Aligned_cols=98 Identities=7% Similarity=-0.072 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|..++..|+|++|+..|+++++++|.+ ..++.++|.+|..+|+|++|+..++++++++|. +..++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~ 159 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN-----VKALYKLGVANMYFGFLEEAKENLYKAASLNPN---NLDIR 159 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT---CHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc-----HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC---cHHHH
Confidence 4578899999999999999999999999999999 999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHcCCHHHHH-HHHHHHHHc
Q 047433 503 WRRSQAYDMKGLGRESL-MDCIMFING 528 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL-~df~kALkl 528 (614)
..++.++..+++.+++. ..|.+.+..
T Consensus 160 ~~l~~~~~~~~~~~~~~~~~~~~~f~~ 186 (198)
T 2fbn_A 160 NSYELCVNKLKEARKKDKLTFGGMFDK 186 (198)
T ss_dssp HHHHHHHHHHHHHHC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999988887 445555544
No 142
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.76 E-value=3.3e-08 Score=98.36 Aligned_cols=108 Identities=8% Similarity=-0.061 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC---
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALG---VCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP--- 495 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIe---l~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~--- 495 (614)
.+..+...|..++..|+|++|+..|.+|++ ..|+. ......+++|+|.+|.++|+|++|+..+++|+++.+..
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~-~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN-EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc-ccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcH
Confidence 456889999999999999999999999994 45543 22234799999999999999999999999999886431
Q ss_pred CccHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHcCC
Q 047433 496 NSHCKSLWRRSQAYDMKGLGRES-LMDCIMFINGCI 530 (614)
Q Consensus 496 ~~~~KAyyRRA~Al~~LG~yeEA-L~df~kALkl~P 530 (614)
.....+|+++|.+|..+|++++| ...|++++.+..
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~ 268 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 11378999999999999999999 777999998854
No 143
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.75 E-value=4.1e-08 Score=84.72 Aligned_cols=109 Identities=15% Similarity=0.134 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC---Cc
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP---NS 497 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~---~~ 497 (614)
.+..+...|..++..|+|++|+..|.+++++.+.. .......++.++|.++..+|++++|+..+++++++.+.. ..
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 127 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIG 127 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHh
Confidence 45678899999999999999999999999987542 234457899999999999999999999999999874321 11
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 498 HCKSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
...+++.+|.++..+|++++|+..+++++++..
T Consensus 128 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 128 EGRACWSLGNAYTALGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999864
No 144
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.75 E-value=5.1e-08 Score=82.61 Aligned_cols=84 Identities=15% Similarity=0.065 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|..++..|++++|+..|.+++++.|.+ ..++.++|.++..+|++++|+..++++++++|. +..++
T Consensus 50 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~---~~~~~ 121 (133)
T 2lni_A 50 AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF-----IKGYTRKAAALEAMKDYTKAMDVYQKALDLDSS---CKEAA 121 (133)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG---GTHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc-----hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC---chHHH
Confidence 4478889999999999999999999999999998 999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHcCC
Q 047433 503 WRRSQAYDMKGL 514 (614)
Q Consensus 503 yRRA~Al~~LG~ 514 (614)
+.++.++..+|+
T Consensus 122 ~~l~~~~~~~~~ 133 (133)
T 2lni_A 122 DGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHhcC
Confidence 999999998874
No 145
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.75 E-value=2.7e-08 Score=90.14 Aligned_cols=81 Identities=14% Similarity=0.003 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|..++..|+|++|+..|.++|+++|.+ ..+|.++|.+|..+|++++|+..++++++++|+ +..+
T Consensus 44 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~~ 115 (164)
T 3sz7_A 44 NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKY-----SKAWSRLGLARFDMADYKGAKEAYEKGIEAEGN---GGSD 115 (164)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSS---SCCH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---chHH
Confidence 45678999999999999999999999999999999 999999999999999999999999999999999 8888
Q ss_pred HHHHHHHHH
Q 047433 502 LWRRSQAYD 510 (614)
Q Consensus 502 yyRRA~Al~ 510 (614)
+++++.+..
T Consensus 116 ~~~~~l~~~ 124 (164)
T 3sz7_A 116 AMKRGLETT 124 (164)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888876544
No 146
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.73 E-value=1e-08 Score=99.10 Aligned_cols=103 Identities=14% Similarity=-0.013 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-----CCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc-----
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVC-----PSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCL----- 491 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~-----P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL----- 491 (614)
.+..+...|..++..|++++|+..|.+++++. ++ ......++.++|.++..+|++++|+..+++++++
T Consensus 110 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~ 187 (311)
T 3nf1_A 110 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD--HPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKL 187 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC--ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHh
Confidence 44455566666666666666666666666664 21 2344555666666666666666666666666665
Q ss_pred ---CCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Q 047433 492 ---SNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGC 529 (614)
Q Consensus 492 ---dP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~ 529 (614)
+|. ...+++.+|.++..+|++++|+..|+++++..
T Consensus 188 ~~~~~~---~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 188 GPDDPN---VAKTKNNLASCYLKQGKFKQAETLYKEILTRA 225 (311)
T ss_dssp CTTCHH---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCCHH---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 444 55666666666666666666666666666553
No 147
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.72 E-value=2.2e-08 Score=99.64 Aligned_cols=109 Identities=10% Similarity=-0.051 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCC---
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPS--RPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPN--- 496 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~--~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~--- 496 (614)
.+..+...|..++..|+|++|+..|.++++.... ......+.++.|+|.+|.++|+|++|+..+++|+++.+..+
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~ 233 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHH
Confidence 4557899999999999999999999999964321 12455678999999999999999999999999999875521
Q ss_pred ccHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHcCC
Q 047433 497 SHCKSLWRRSQAYDMKGL-GRESLMDCIMFINGCI 530 (614)
Q Consensus 497 ~~~KAyyRRA~Al~~LG~-yeEAL~df~kALkl~P 530 (614)
....+|+++|.++..+|+ +++|+..|++++.+..
T Consensus 234 ~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 137899999999999994 7999999999998854
No 148
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.72 E-value=9e-08 Score=106.67 Aligned_cols=109 Identities=13% Similarity=-0.019 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcC--CcHHHHHHH
Q 047433 418 EMRVLVGLIKQEAKHLFWLGE----------IEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLR--EPDAAISDA 485 (614)
Q Consensus 418 ~~~~~A~~lK~~GN~lFk~Gd----------yeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLG--dyeeAI~D~ 485 (614)
..++....|..+|..+...|+ +++|+..|+++|+.+|.+ ..+|++|+.++.+++ +|++|+..+
T Consensus 58 ~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~-----y~aW~hR~w~l~~l~~~~~~~el~~~ 132 (567)
T 1dce_A 58 ANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS-----YGTWHHRCWLLSRLPEPNWARELELC 132 (567)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHTCSSCCHHHHHHHH
T ss_pred HCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcccccHHHHHHHH
Confidence 344566789999999988888 999999999999999999 999999999999999 669999999
Q ss_pred HHHHhcCCCCCccHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHcCCCCCC
Q 047433 486 TRALCLSNPPNSHCKSLWRRSQAYDMKG-LGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 486 ~~ALeLdP~~~~~~KAyyRRA~Al~~LG-~yeEAL~df~kALkl~P~~~D 534 (614)
++++++||. +..||..|+.++..+| .++++++++.++++.+|.+..
T Consensus 133 ~k~l~~d~~---N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~s 179 (567)
T 1dce_A 133 ARFLEADER---NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 179 (567)
T ss_dssp HHHHHHCTT---CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHH
T ss_pred HHHHhhccc---cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCcc
Confidence 999999999 9999999999999999 999999999999999986443
No 149
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.72 E-value=6.7e-08 Score=99.22 Aligned_cols=112 Identities=11% Similarity=-0.067 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHh-----cCCCC
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALC-----LSNPP 495 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALe-----LdP~~ 495 (614)
.+..+...|..++..|+|++|+..|.+|+++.+.. .....+.++.|+|.+|..+|++++|+..+++|++ .+|.
T Consensus 181 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~- 259 (378)
T 3q15_A 181 TIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL- 259 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG-
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh-
Confidence 56688999999999999999999999999986532 2345678999999999999999999999999999 7788
Q ss_pred CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChH
Q 047433 496 NSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTS 536 (614)
Q Consensus 496 ~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~ 536 (614)
...+++.+|.++..+|++++|+..+++++++.+...++.
T Consensus 260 --~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 298 (378)
T 3q15_A 260 --LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKF 298 (378)
T ss_dssp --HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSC
T ss_pred --HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 899999999999999999999999999999987655543
No 150
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.71 E-value=4.5e-08 Score=98.55 Aligned_cols=112 Identities=10% Similarity=-0.072 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-cchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCC---c
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRP-KNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPN---S 497 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~-~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~---~ 497 (614)
.+..+.+.|+.+...|+|++|+..|.+|+++.+... ....+.++.|+|.+|.. |++++|+..+++|+++.|... .
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~ 153 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQ 153 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhH
Confidence 566888999999999999999999999999965421 23457899999999999 999999999999999987521 1
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 498 HCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
...++.++|.+|..+|+|++|+..|++++++.|+..+
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 190 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMEN 190 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Confidence 2678999999999999999999999999999775544
No 151
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.71 E-value=1.8e-07 Score=95.95 Aligned_cols=106 Identities=16% Similarity=0.033 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCC----ccH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPN----SHC 499 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~----~~~ 499 (614)
.+..+|..++..|+|++|+..|.+|+++.+.. .....+.++.++|.+|..+|+++.|+..+.+|+++.+..+ ...
T Consensus 103 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 182 (378)
T 3q15_A 103 SLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTI 182 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHH
Confidence 34455555566666666666666666554321 1233455556666666666666666666666655533211 123
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 500 KSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 500 KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
.++..+|.++..+|++++|+..|++++++.+
T Consensus 183 ~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 213 (378)
T 3q15_A 183 QSLFVIAGNYDDFKHYDKALPHLEAALELAM 213 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 4555556666666666666666666655543
No 152
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.71 E-value=1.1e-07 Score=98.59 Aligned_cols=164 Identities=8% Similarity=-0.078 Sum_probs=116.4
Q ss_pred HHHHcCCH-HHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcC--CcHHHHHHHHHHHhcCCCCCccHHHHHHHHHH
Q 047433 432 HLFWLGEI-EEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLR--EPDAAISDATRALCLSNPPNSHCKSLWRRSQA 508 (614)
Q Consensus 432 ~lFk~Gdy-eeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLG--dyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~A 508 (614)
+..+.|.+ ++|+..++++|.++|++ ..+|++|+.++..++ ++++++..++.+|.++|. +..+|+.|+.+
T Consensus 41 a~~~~~e~s~~aL~~t~~~L~~nP~~-----~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk---~y~aW~~R~~i 112 (306)
T 3dra_A 41 ALMKAEEYSERALHITELGINELASH-----YTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK---NYQIWNYRQLI 112 (306)
T ss_dssp HHHHTTCCSHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT---CCHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHCcHH-----HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc---cHHHHHHHHHH
Confidence 33445655 68999999999999999 999999999999999 999999999999999999 99999999999
Q ss_pred H----HHc---CCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHH--HHHHHHhhhhhcCCCCCCCCccCCcC
Q 047433 509 Y----DMK---GLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHM--NALWVFGGARSKILSSPVNNVQESYG 579 (614)
Q Consensus 509 l----~~L---G~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqm--ea~~lF~~Ai~k~~~~~~~~~~e~~~ 579 (614)
+ ..+ +++++++..+.++++.+|++...-.... ++...++..- ++...+.+++..++.....-.+....
T Consensus 113 L~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~---~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~l 189 (306)
T 3dra_A 113 IGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRK---WLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFL 189 (306)
T ss_dssp HHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHH---HHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHH---HHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9 777 8999999999999999885433211111 1111111111 23344555666554433211111111
Q ss_pred Ccc------cchhhhHHHHHHHHHHhcccccCC
Q 047433 580 ENK------SGIEEQRYCDMIRTMMEKKNLISG 606 (614)
Q Consensus 580 ~~~------~g~~eQ~~dD~iral~~~~~~~~g 606 (614)
... ...-+++++.+.++|..+|+..|.
T Consensus 190 l~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~Sa 222 (306)
T 3dra_A 190 LFSKKHLATDNTIDEELNYVKDKIVKCPQNPST 222 (306)
T ss_dssp HHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHH
T ss_pred HHhccccchhhhHHHHHHHHHHHHHhCCCCccH
Confidence 111 123677888889999999887654
No 153
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.70 E-value=1.4e-07 Score=82.67 Aligned_cols=98 Identities=5% Similarity=-0.207 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchH
Q 047433 463 VLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIP 542 (614)
Q Consensus 463 ~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~ 542 (614)
..+.++|.++++.|++++|+..++++++++|+ +..+|+.+|.++..+|++++|+..|+++++++|++.+ ....+.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~--~~~~la 92 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE---REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIA--VHAALA 92 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH--HHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH--HHHHHH
Confidence 35788999999999999999999999999999 9999999999999999999999999999999996433 222222
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcC
Q 047433 543 YYAARMISKHMNALWVFGGARSKI 566 (614)
Q Consensus 543 ~y~~r~i~Kqmea~~lF~~Ai~k~ 566 (614)
.+....++..++...|.+++...
T Consensus 93 -~~~~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 93 -VSHTNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHC--
T ss_pred -HHHHHcCCHHHHHHHHHHHHHhC
Confidence 12223344445555666666544
No 154
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.69 E-value=9.5e-08 Score=82.18 Aligned_cols=74 Identities=12% Similarity=0.015 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHH
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCK 500 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~K 500 (614)
..+..+...|..++..|+|++|+..|.+++++.|++ +.++.++|.++..+|++++|+..++++++++|+ +..
T Consensus 25 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---~~~ 96 (117)
T 3k9i_A 25 DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH-----QALRVFYAMVLYNLGRYEQGVELLLKIIAETSD---DET 96 (117)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC---CHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---cHH
Confidence 356689999999999999999999999999999999 999999999999999999999999999999999 665
Q ss_pred HH
Q 047433 501 SL 502 (614)
Q Consensus 501 Ay 502 (614)
..
T Consensus 97 ~~ 98 (117)
T 3k9i_A 97 IQ 98 (117)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 155
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.69 E-value=2.4e-06 Score=82.87 Aligned_cols=183 Identities=10% Similarity=-0.035 Sum_probs=125.7
Q ss_pred cccch--hhHHHHHHHHHhhcccccCCCcchhhhhhHHHHh----ccChhHHHHHHHHHHHHhhchhhhhhccCCCcCcH
Q 047433 292 SKTGR--KNIAECKQVIENLCNLSRSSDDWQYMGIDCLLFL----LKDPDTRYKVIETAALFLIDLVELNSLLDRPKNLG 365 (614)
Q Consensus 292 ~~~~~--~aia~~~~~i~~lc~~srssd~w~y~~idcll~L----lkd~~try~v~dka~~aLvDLseL~~Lg~~~k~lG 365 (614)
...|+ +|+..++++++ ++ +...+..++.++.. .+|.+.....+.+++..- + .... ..+|
T Consensus 17 ~~~~~~~~A~~~~~~a~~--~~-----~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-~-~~a~------~~lg 81 (273)
T 1ouv_A 17 YKEKDFTQAKKYFEKACD--LK-----ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN-Y-SNGC------HLLG 81 (273)
T ss_dssp HHTTCHHHHHHHHHHHHH--TT-----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-C-HHHH------HHHH
T ss_pred HhCCCHHHHHHHHHHHHH--CC-----CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC-C-HHHH------HHHH
Confidence 34444 68888888888 22 23566677888888 888888888888876441 1 0000 1111
Q ss_pred HHHHHHHHHhhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHH----cCCHHH
Q 047433 366 EAITRALLLDYKLTEQKFKNKKVQKALEEIWELKVERRKREKMMMMSEEKVEEMRVLVGLIKQEAKHLFW----LGEIEE 441 (614)
Q Consensus 366 e~it~aLl~dy~~~~~~p~n~e~~~aL~el~~lkvEr~erEk~~~ls~eel~~~~~~A~~lK~~GN~lFk----~Gdyee 441 (614)
..|..... ......+++.-+.... .. ..+..+...|..+.. .+++++
T Consensus 82 --------~~~~~g~~--~~~~~~~A~~~~~~a~----------~~---------~~~~a~~~lg~~~~~~~~~~~~~~~ 132 (273)
T 1ouv_A 82 --------NLYYSGQG--VSQNTNKALQYYSKAC----------DL---------KYAEGCASLGGIYHDGKVVTRDFKK 132 (273)
T ss_dssp --------HHHHHTSS--SCCCHHHHHHHHHHHH----------HT---------TCHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred --------HHHhCCCC--cccCHHHHHHHHHHHH----------Hc---------CCccHHHHHHHHHHcCCCcccCHHH
Confidence 11111000 0111112222111111 11 134578888999998 999999
Q ss_pred HHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHH----cCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHH----cC
Q 047433 442 AAMKYTEALGVCPSRPKNERMVLYSNRAQCHLL----LREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDM----KG 513 (614)
Q Consensus 442 AI~~YtkAIel~P~~~~~~~a~lysNRA~~ylk----LGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~----LG 513 (614)
|+..|.++++..+ ..++.++|.+|.. .+++++|+..++++++++ +..+++.+|.+|.. .+
T Consensus 133 A~~~~~~a~~~~~-------~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~-----~~~a~~~lg~~~~~g~~~~~ 200 (273)
T 1ouv_A 133 AVEYFTKACDLND-------GDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK-----DSPGCFNAGNMYHHGEGATK 200 (273)
T ss_dssp HHHHHHHHHHTTC-------HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHTCSSCC
T ss_pred HHHHHHHHHhcCc-------HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHcCCCCCc
Confidence 9999999999763 7789999999999 999999999999999884 46899999999999 99
Q ss_pred CHHHHHHHHHHHHHcCC
Q 047433 514 LGRESLMDCIMFINGCI 530 (614)
Q Consensus 514 ~yeEAL~df~kALkl~P 530 (614)
++++|+..|+++++..|
T Consensus 201 ~~~~A~~~~~~a~~~~~ 217 (273)
T 1ouv_A 201 NFKEALARYSKACELEN 217 (273)
T ss_dssp CHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHhCCC
Confidence 99999999999999854
No 156
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.69 E-value=1.8e-08 Score=104.08 Aligned_cols=101 Identities=15% Similarity=-0.047 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWR 504 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyR 504 (614)
.+.+.|..+++.|+|++|+..|+++|+++|.+ ..+|+|+|.+|..+|+|++|+.+++++++++|+ +..++..
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~---~~~a~~~ 303 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKN-----PKALFRRGKAKAELGQMDSARDDFRKAQKYAPD---DKAIRRE 303 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC---CHHHHHH
Confidence 67889999999999999999999999999999 999999999999999999999999999999999 9999999
Q ss_pred HHHH-HHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 505 RSQA-YDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 505 RA~A-l~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
++.+ ....+..+++...|.+++...|++.
T Consensus 304 L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 304 LRALAEQEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp ------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 9988 4456788889999999999988543
No 157
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.67 E-value=1.7e-07 Score=91.08 Aligned_cols=164 Identities=8% Similarity=-0.120 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHH----cCCcHHHHHHHHHHHhc
Q 047433 420 RVLVGLIKQEAKHLFW----LGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLL----LREPDAAISDATRALCL 491 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk----~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylk----LGdyeeAI~D~~~ALeL 491 (614)
+..+..+...|..++. .+++++|+..|.++++.. + +.++.++|.+|.. .+++++|+..+++++++
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~-----~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~ 107 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--Y-----SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL 107 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C-----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--C-----HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc
Confidence 3455677888888888 899999999999998875 4 7888899999998 89999999999999887
Q ss_pred CCCCCccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHH---HHHHHHHHHHHHhhhhh
Q 047433 492 SNPPNSHCKSLWRRSQAYDM----KGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAAR---MISKHMNALWVFGGARS 564 (614)
Q Consensus 492 dP~~~~~~KAyyRRA~Al~~----LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r---~i~Kqmea~~lF~~Ai~ 564 (614)
+ +..+++.+|.+|.. .|++++|+..|+++++..+ +.....+...... ...+..++...|.+++.
T Consensus 108 ~-----~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~----~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~ 178 (273)
T 1ouv_A 108 K-----YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND----GDGCTILGSLYDAGRGTPKDLKKALASYDKACD 178 (273)
T ss_dssp T-----CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred C-----CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 4 57889999999988 8999999999999988742 3222222211110 01223345556666665
Q ss_pred cCCCCCCCCccCCc----CCcccchhhhHHHHHHHHHHhcc
Q 047433 565 KILSSPVNNVQESY----GENKSGIEEQRYCDMIRTMMEKK 601 (614)
Q Consensus 565 k~~~~~~~~~~e~~----~~~~~g~~eQ~~dD~iral~~~~ 601 (614)
... +.....-.. +.+..+..++++..+.+++...+
T Consensus 179 ~~~--~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~ 217 (273)
T 1ouv_A 179 LKD--SPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 217 (273)
T ss_dssp TTC--HHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC
T ss_pred CCC--HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC
Confidence 421 111111111 22226666667777766666543
No 158
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.66 E-value=1.1e-07 Score=100.03 Aligned_cols=94 Identities=17% Similarity=0.072 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccH
Q 047433 420 RVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHC 499 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~ 499 (614)
...+..+.+.|..+++.|+|++|+..|+++|+++|++ +.+|.++|.+|..+|+|++|+.++++|++++|+ +.
T Consensus 270 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~---~~ 341 (370)
T 1ihg_A 270 PVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSN-----TKALYRRAQGWQGLKEYDQALADLKKAQEIAPE---DK 341 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CH
T ss_pred HHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchh-----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---CH
Confidence 3466789999999999999999999999999999999 999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHcCCHHHHHHH
Q 047433 500 KSLWRRSQAYDMKGLGRESLMD 521 (614)
Q Consensus 500 KAyyRRA~Al~~LG~yeEAL~d 521 (614)
.++..++.++..+++++++.+.
T Consensus 342 ~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 342 AIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887653
No 159
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.64 E-value=2.2e-07 Score=80.08 Aligned_cols=104 Identities=13% Similarity=-0.029 Sum_probs=79.6
Q ss_pred hCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 452 VCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 452 l~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
..|.. +..+.++|.+++..|+|++|+..++++++++|. +..+++.+|.++..+|++++|+..|++++++.|+
T Consensus 4 ~~~~~-----~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 75 (137)
T 3q49_B 4 MKSPS-----AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL---VAVYYTNRALCYLKMQQPEQALADCRRALELDGQ 75 (137)
T ss_dssp --CCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred Ccccc-----HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC---cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch
Confidence 45566 899999999999999999999999999999999 9999999999999999999999999999999985
Q ss_pred CCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcC
Q 047433 532 SETTSKRVKIPYYAARMISKHMNALWVFGGARSKI 566 (614)
Q Consensus 532 ~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~ 566 (614)
+. .....+. .+....++..++...|..++...
T Consensus 76 ~~--~~~~~l~-~~~~~~~~~~~A~~~~~~a~~~~ 107 (137)
T 3q49_B 76 SV--KAHFFLG-QCQLEMESYDEAIANLQRAYSLA 107 (137)
T ss_dssp CH--HHHHHHH-HHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hH--HHHHHHH-HHHHHHhhHHHHHHHHHHHHHHC
Confidence 32 2222222 11112223334555666666554
No 160
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.63 E-value=5.7e-08 Score=82.10 Aligned_cols=68 Identities=13% Similarity=0.020 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCC
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNP 494 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~ 494 (614)
.+..+...|..++..|+|++|+..|+++++++|++ ..+|.++|.+|..+|++++|+..+++++++.|.
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDY-----VGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 45678999999999999999999999999999999 899999999999999999999999999999875
No 161
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.63 E-value=3.9e-07 Score=100.18 Aligned_cols=117 Identities=15% Similarity=-0.073 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHH
Q 047433 412 SEEKVEEMRVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR---PKNERMVLYSNRAQCHLLLREPDAAISDATRA 488 (614)
Q Consensus 412 s~eel~~~~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~---~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~A 488 (614)
+.+........+....+++..+..+|+|++|+..|.++|++...- .....+..++|+|.+|..+|+|++|+..+.++
T Consensus 298 s~e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~a 377 (490)
T 3n71_A 298 SQEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRM 377 (490)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 344444455566667777778888999999999999999874331 23567889999999999999999999999999
Q ss_pred Hhc-----CCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 047433 489 LCL-----SNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFING 528 (614)
Q Consensus 489 LeL-----dP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl 528 (614)
|++ .|+++.-..++.++|.+|..+|+|++|+..|++|+++
T Consensus 378 L~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 378 VDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 975 3442235689999999999999999999999999965
No 162
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.63 E-value=1.6e-07 Score=77.38 Aligned_cols=67 Identities=12% Similarity=-0.020 Sum_probs=62.7
Q ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 465 YSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCK-SLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 465 ysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~K-AyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
..++|.+++..|+|++|+..++++++++|. +.. +++.+|.++..+|++++|+..|++++++.|++..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~ 70 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV---GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPA 70 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS---THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC---cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHH
Confidence 367899999999999999999999999999 999 9999999999999999999999999999986443
No 163
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.63 E-value=3.8e-07 Score=75.63 Aligned_cols=83 Identities=19% Similarity=0.174 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
...+...|..++..|++++|+..|.++++..|.+ ..++.++|.++..+|++++|+..++++++++|. +..++
T Consensus 43 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 114 (125)
T 1na0_A 43 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-----AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN---NAEAK 114 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---cHHHH
Confidence 3467788999999999999999999999999998 899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHcC
Q 047433 503 WRRSQAYDMKG 513 (614)
Q Consensus 503 yRRA~Al~~LG 513 (614)
..+|.++..+|
T Consensus 115 ~~l~~~~~~~g 125 (125)
T 1na0_A 115 QNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcc
Confidence 99999988765
No 164
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.61 E-value=6e-07 Score=89.17 Aligned_cols=109 Identities=11% Similarity=-0.054 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-cchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHh---cCCCCC-
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRP-KNERMVLYSNRAQCHLLLREPDAAISDATRALC---LSNPPN- 496 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~-~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALe---LdP~~~- 496 (614)
....+...|..+...|+|++|+..|.+|+++.+... ....+.+++|+|.+|..+|+|++|+..+++|++ ..|+.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~ 193 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcccc
Confidence 334456688888999999999999999999876532 223467999999999999999999999999994 455411
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 497 SHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 497 ~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
....+++++|.+|..+|+|++|+..|++++++.+
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 1227999999999999999999999999999864
No 165
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.60 E-value=2.9e-07 Score=91.50 Aligned_cols=111 Identities=12% Similarity=-0.045 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-cchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcC----CCCCc
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRP-KNERMVLYSNRAQCHLLLREPDAAISDATRALCLS----NPPNS 497 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~-~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLd----P~~~~ 497 (614)
+..+...|..++..|+|++|+..|.+|+++.+... ......+++|+|.+|..+|+|++|+..+++|+++- ...+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 44566689989999999999999999999765532 22345689999999999999999999999999531 11112
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 498 HCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
...+++++|.+|..+|+|++|+..+++++++.+...
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~ 230 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC
Confidence 567999999999999999999999999999976443
No 166
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.59 E-value=4.4e-07 Score=96.06 Aligned_cols=114 Identities=12% Similarity=-0.035 Sum_probs=94.8
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHc-C-CcHHHHHHHH
Q 047433 410 MMSEEKVEEMRVLVGLIKQEAKHLFWLG-EIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLL-R-EPDAAISDAT 486 (614)
Q Consensus 410 ~ls~eel~~~~~~A~~lK~~GN~lFk~G-dyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkL-G-dyeeAI~D~~ 486 (614)
.++..-+..+++....|..+|..+...| .+++++..++++|..+|.+ ..+|++|+.++..+ + ++++++..++
T Consensus 75 ~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKn-----y~aW~hR~wlL~~l~~~~~~~EL~~~~ 149 (349)
T 3q7a_A 75 ELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKS-----YQVWHHRLLLLDRISPQDPVSEIEYIH 149 (349)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCC-----HHHHHHHHHHHHHHCCSCCHHHHHHHH
T ss_pred HHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 4444445555666777888888888888 5888999999999888888 88899998888888 7 8888999999
Q ss_pred HHHhcCCCCCccHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHHcCCC
Q 047433 487 RALCLSNPPNSHCKSLWRRSQAYDMKGLGR--------ESLMDCIMFINGCIR 531 (614)
Q Consensus 487 ~ALeLdP~~~~~~KAyyRRA~Al~~LG~ye--------EAL~df~kALkl~P~ 531 (614)
++|+++|. +..+|..|+.++..+|.++ ++++.+.++++.+|.
T Consensus 150 k~L~~dpk---Ny~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~ 199 (349)
T 3q7a_A 150 GSLLPDPK---NYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGR 199 (349)
T ss_dssp HHTSSCTT---CHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHhCCC---CHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCC
Confidence 99999988 8889988888888888887 888888888888774
No 167
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.59 E-value=2.5e-07 Score=74.06 Aligned_cols=68 Identities=16% Similarity=0.067 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 462 MVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 462 a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
+.++.++|.++...|++++|+..++++++++|. +..+++.+|.++..+|++++|+..|++++++.|++
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 76 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN---NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC---CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 788999999999999999999999999999999 99999999999999999999999999999998853
No 168
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.58 E-value=2.6e-07 Score=95.73 Aligned_cols=111 Identities=12% Similarity=-0.033 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHH----HHc---CCcHHHHHHH
Q 047433 415 KVEEMRVLVGLIKQEAKHLFWLG--EIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCH----LLL---REPDAAISDA 485 (614)
Q Consensus 415 el~~~~~~A~~lK~~GN~lFk~G--dyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~y----lkL---GdyeeAI~D~ 485 (614)
-+..++.....|..+|..+...| ++++++..++++|..+|.+ ..+|++|+.++ ..+ +++++++..+
T Consensus 59 ~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~-----y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~ 133 (306)
T 3dra_A 59 GINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKN-----YQIWNYRQLIIGQIMELNNNDFDPYREFDIL 133 (306)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTC-----CHHHHHHHHHHHHHHHHTTTCCCTHHHHHHH
T ss_pred HHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCccc-----HHHHHHHHHHHHHHHHhccccCCHHHHHHHH
Confidence 34444556778999999999999 9999999999999999999 99999999999 778 8999999999
Q ss_pred HHHHhcCCCCCccHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHcCCCCC
Q 047433 486 TRALCLSNPPNSHCKSLWRRSQAYDMKGLGR--ESLMDCIMFINGCIRSE 533 (614)
Q Consensus 486 ~~ALeLdP~~~~~~KAyyRRA~Al~~LG~ye--EAL~df~kALkl~P~~~ 533 (614)
+++++++|. +..+|+.|+.++..+|.++ ++++.+.++++.+|.+.
T Consensus 134 ~~~l~~~pk---ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~ 180 (306)
T 3dra_A 134 EAMLSSDPK---NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNN 180 (306)
T ss_dssp HHHHHHCTT---CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhCCC---CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCH
Confidence 999999999 9999999999999999999 99999999999988543
No 169
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.57 E-value=2.7e-07 Score=96.94 Aligned_cols=170 Identities=13% Similarity=0.043 Sum_probs=114.8
Q ss_pred HHHHHHHHHHcCCHH-HHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCC----------cHHHHHHHHHHHhcCCC
Q 047433 426 IKQEAKHLFWLGEIE-EAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLRE----------PDAAISDATRALCLSNP 494 (614)
Q Consensus 426 lK~~GN~lFk~Gdye-eAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGd----------yeeAI~D~~~ALeLdP~ 494 (614)
+...-....+.|+|. +|+..++++|.++|.+ ..+|+.|+.++..+++ +++++..++.+|..+|.
T Consensus 32 ~~~~~~~~~~~~e~s~eaL~~t~~~L~~nP~~-----ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK 106 (331)
T 3dss_A 32 ATQAVFQKRQAGELDESVLELTSQILGANPDF-----ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK 106 (331)
T ss_dssp HHHHHHHHHHTTCCSHHHHHHHHHHHTTCTTC-----HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHCchh-----HHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC
Confidence 333344445678775 7999999999999999 9999999999988876 68999999999999999
Q ss_pred CCccHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHH-HHHHHHHHhhhhhcCCCCCC
Q 047433 495 PNSHCKSLWRRSQAYDMKGL--GRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISK-HMNALWVFGGARSKILSSPV 571 (614)
Q Consensus 495 ~~~~~KAyyRRA~Al~~LG~--yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~K-qmea~~lF~~Ai~k~~~~~~ 571 (614)
+..+|+.|+.++..+|. +++++..+.++++.+|.+..+-.... ++....+. ..++...+.+++..++....
T Consensus 107 ---ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~---~vl~~l~~~~~eel~~~~~~I~~~p~N~S 180 (331)
T 3dss_A 107 ---SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRR---FVAAQAAVAPAEELAFTDSLITRNFSNYS 180 (331)
T ss_dssp ---CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHH---HHHHHTTCCHHHHHHHHHHHHHHCSCCHH
T ss_pred ---CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHH---HHHHHhCcCHHHHHHHHHHHHHHCCCCHH
Confidence 99999999999999994 89999999999999885432211111 11111111 11233344555555444321
Q ss_pred CCccC--------------CcCCcccchhhhHHHHHHHHHHhcccccCC
Q 047433 572 NNVQE--------------SYGENKSGIEEQRYCDMIRTMMEKKNLISG 606 (614)
Q Consensus 572 ~~~~e--------------~~~~~~~g~~eQ~~dD~iral~~~~~~~~g 606 (614)
.-.+. +.+....+.-+++++.+.++|...|+..|.
T Consensus 181 AW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~Sa 229 (331)
T 3dss_A 181 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSA 229 (331)
T ss_dssp HHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHH
Confidence 11111 011111245678899999999999987653
No 170
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.57 E-value=6e-07 Score=73.87 Aligned_cols=79 Identities=13% Similarity=-0.016 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|..++..|+|++|+..|.++++..|.+ ..++.++|.++..+|++++|+..++++++++|+ +..++
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~ 109 (118)
T 1elw_A 38 HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW-----GKGYSRKAAALEFLNRFEEAKRTYEEGLKHEAN---NPQLK 109 (118)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT---CHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc-----HHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCC---CHHHH
Confidence 4468889999999999999999999999999998 999999999999999999999999999999999 99999
Q ss_pred HHHHHHH
Q 047433 503 WRRSQAY 509 (614)
Q Consensus 503 yRRA~Al 509 (614)
..++.+.
T Consensus 110 ~~l~~~~ 116 (118)
T 1elw_A 110 EGLQNME 116 (118)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 8888764
No 171
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.55 E-value=1.3e-07 Score=89.80 Aligned_cols=68 Identities=18% Similarity=0.021 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-------CCCCCcchhHHHH----HHHHHHHHHcCCcHHHHHHHHHHHh
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGV-------CPSRPKNERMVLY----SNRAQCHLLLREPDAAISDATRALC 490 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel-------~P~~~~~~~a~ly----sNRA~~ylkLGdyeeAI~D~~~ALe 490 (614)
.+..|.++|..+.+.|+|++|+..|++||++ +|++ +.+| +|||.++..+|++++|+.+|++||+
T Consensus 56 ~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~-----~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 56 DAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDE-----GKLWISAVYSRALALDGLGRGAEAMPEFKKVVE 130 (159)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTH-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCch-----HHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHh
Confidence 4458999999999999999999999999999 9998 9999 9999999999999999999999999
Q ss_pred cCCC
Q 047433 491 LSNP 494 (614)
Q Consensus 491 LdP~ 494 (614)
++|.
T Consensus 131 l~p~ 134 (159)
T 2hr2_A 131 MIEE 134 (159)
T ss_dssp HHHH
T ss_pred cCCC
Confidence 9998
No 172
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.54 E-value=2.8e-07 Score=99.28 Aligned_cols=100 Identities=8% Similarity=-0.144 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhH-HHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERM-VLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a-~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
...+...|..+.+.|++++|...|.+++++.|.+ + .+|.+.+.++.+.|++++|+..+.+|++..|. ....
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~---~~~~ 392 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDID-----PTLVYIQYMKFARRAEGIKSGRMIFKKAREDART---RHHV 392 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC---CTHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccC-----chHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC---chHH
Confidence 3344455555555555555555555555555543 3 35555555555555555555555555555554 4444
Q ss_pred HHHHHHH-HHHcCCHHHHHHHHHHHHHcCC
Q 047433 502 LWRRSQA-YDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 502 yyRRA~A-l~~LG~yeEAL~df~kALkl~P 530 (614)
++..+.. +...|++++|...|+++++..|
T Consensus 393 ~~~~a~~~~~~~~~~~~A~~~~e~al~~~p 422 (530)
T 2ooe_A 393 YVTAALMEYYCSKDKSVAFKIFELGLKKYG 422 (530)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHCC
Confidence 4444333 2235555555555555555555
No 173
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.52 E-value=3.4e-07 Score=78.12 Aligned_cols=71 Identities=13% Similarity=-0.122 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 463 VLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 463 ~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
..+.++|.+++..|+|++|+..++++++.+|+......+++.+|.++..+|++++|+..|+++++..|++.
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~ 73 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 73 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCc
Confidence 45788999999999999999999999999999222228999999999999999999999999999998653
No 174
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.50 E-value=5.1e-07 Score=82.46 Aligned_cols=113 Identities=11% Similarity=-0.047 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC--cchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC---C
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRP--KNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP---N 496 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~--~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~---~ 496 (614)
.+..+...|..+...|++++|+..|.+++++..... ......++.|+|.++..+|++++|+..+++++++.+.. .
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 144 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQV 144 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchH
Confidence 566889999999999999999999999999832211 22457889999999999999999999999999774321 1
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 497 SHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 497 ~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
....++..+|.++..+|++++|+..+++++++.....+
T Consensus 145 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 182 (203)
T 3gw4_A 145 AIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELED 182 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC
Confidence 12456789999999999999999999999998654333
No 175
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.48 E-value=9.4e-07 Score=76.30 Aligned_cols=80 Identities=16% Similarity=0.065 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
...+...|..++..|+|++|+..|.+++++.|.+ ..++.++|.+|..+|++++|+..++++++++|+ +..++
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~ 136 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD-----VKALYRRSQALEKLGRLDQAVLDLQRCVSLEPK---NKVFQ 136 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSS---CHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC---cHHHH
Confidence 5578899999999999999999999999999998 999999999999999999999999999999999 88888
Q ss_pred HHHHHHHH
Q 047433 503 WRRSQAYD 510 (614)
Q Consensus 503 yRRA~Al~ 510 (614)
..++.+..
T Consensus 137 ~~l~~~~~ 144 (148)
T 2dba_A 137 EALRNISG 144 (148)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 77777643
No 176
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.46 E-value=7.5e-06 Score=85.95 Aligned_cols=116 Identities=9% Similarity=-0.097 Sum_probs=103.8
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCC-cHHHHHHHH
Q 047433 410 MMSEEKVEEMRVLVGLIKQEAKHLFWLG--EIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLRE-PDAAISDAT 486 (614)
Q Consensus 410 ~ls~eel~~~~~~A~~lK~~GN~lFk~G--dyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGd-yeeAI~D~~ 486 (614)
.+...-+...++....|..++..+...| ++++++..++++|+.+|.+ ..+|++|+.+...+|. +++++..++
T Consensus 95 ~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprN-----y~AW~~R~~vl~~l~~~~~eel~~~~ 169 (331)
T 3dss_A 95 GFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN-----FHCWDYRRFVAAQAAVAPAEELAFTD 169 (331)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHhCcCHHHHHHHHH
Confidence 4555556666778889999999999988 4999999999999999999 9999999999999999 599999999
Q ss_pred HHHhcCCCCCccHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHHcCCCCC
Q 047433 487 RALCLSNPPNSHCKSLWRRSQAYDMK--------------GLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 487 ~ALeLdP~~~~~~KAyyRRA~Al~~L--------------G~yeEAL~df~kALkl~P~~~ 533 (614)
++|+.+|. +..||..|+.++..+ +.++++++.+.+++..+|++.
T Consensus 170 ~~I~~~p~---N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 170 SLITRNFS---NYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp HHHHHCSC---CHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHCCC---CHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 99999999 999999999999988 568999999999999999643
No 177
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.45 E-value=8e-07 Score=75.53 Aligned_cols=84 Identities=11% Similarity=-0.064 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
+..+...|..++..|+|++|+..|.++++++|.+ ..++.++|.+|..+|++++|+..++++++++|.. .+..+.
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~ 92 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY-----SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSR-GDQQVV 92 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH-TCHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcccc-ccHHHH
Confidence 4478899999999999999999999999999999 9999999999999999999999999999999851 033444
Q ss_pred HHHHHHHHHc
Q 047433 503 WRRSQAYDMK 512 (614)
Q Consensus 503 yRRA~Al~~L 512 (614)
......+..+
T Consensus 93 ~~l~~~l~~l 102 (115)
T 2kat_A 93 KELQVFLRRL 102 (115)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4444444433
No 178
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.43 E-value=1.4e-06 Score=94.38 Aligned_cols=103 Identities=7% Similarity=-0.107 Sum_probs=84.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc-----CCCCCc
Q 047433 426 IKQEAKHLFWLGEIEEAAMKYTEALGVCPSR---PKNERMVLYSNRAQCHLLLREPDAAISDATRALCL-----SNPPNS 497 (614)
Q Consensus 426 lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~---~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL-----dP~~~~ 497 (614)
..+.+...-..|+|++|+..|.++|++.-.- .....+..++|+|.+|..+|+|++|+..+.++|++ .|+++.
T Consensus 301 ~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~ 380 (433)
T 3qww_A 301 VIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN 380 (433)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH
T ss_pred HHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH
Confidence 3334444456789999999999999864221 23567889999999999999999999999999975 344222
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 047433 498 HCKSLWRRSQAYDMKGLGRESLMDCIMFING 528 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG~yeEAL~df~kALkl 528 (614)
-...|.++|.+|..+|+|++|+..|++|+++
T Consensus 381 ~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 381 VASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999987
No 179
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.43 E-value=2.6e-07 Score=87.61 Aligned_cols=71 Identities=17% Similarity=0.028 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcC-----------C
Q 047433 419 MRVLVGLIKQEAKHLFWLGEI----------EEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLR-----------E 477 (614)
Q Consensus 419 ~~~~A~~lK~~GN~lFk~Gdy----------eeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLG-----------d 477 (614)
.+..+..+.+.|+.+...+++ ++||..|++||+++|+. ..+|+|+|.+|..+| +
T Consensus 32 ~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~-----~~A~~~LG~ay~~lg~l~P~~~~a~g~ 106 (158)
T 1zu2_A 32 NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK-----DEAVWCIGNAYTSFAFLTPDETEAKHN 106 (158)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc-----HHHHHHHHHHHHHhcccCcchhhhhcc
Confidence 344566788888888877765 59999999999999999 999999999999985 8
Q ss_pred cHHHHHHHHHHHhcCCC
Q 047433 478 PDAAISDATRALCLSNP 494 (614)
Q Consensus 478 yeeAI~D~~~ALeLdP~ 494 (614)
|++|+..|++|++++|+
T Consensus 107 ~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 107 FDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 99999999999999999
No 180
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.39 E-value=1.2e-06 Score=92.78 Aligned_cols=160 Identities=8% Similarity=-0.123 Sum_probs=117.6
Q ss_pred cCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcC-CcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHc-C
Q 047433 436 LGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLR-EPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMK-G 513 (614)
Q Consensus 436 ~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLG-dyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~L-G 513 (614)
.+..++|+..++++|.++|.+ ..+|++|+.++..+| ++++++..++.+|..+|+ +..+|+.|+.++..+ +
T Consensus 67 ~e~se~AL~lt~~~L~~nP~~-----ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK---ny~aW~hR~wlL~~l~~ 138 (349)
T 3q7a_A 67 EEKSERALELTEIIVRMNPAH-----YTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK---SYQVWHHRLLLLDRISP 138 (349)
T ss_dssp TCCSHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHHhCchh-----HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC---cHHHHHHHHHHHHHhcC
Confidence 344578999999999999999 999999999999999 599999999999999999 999999999999998 8
Q ss_pred -CHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHH--------HHHHHHhhhhhcCCCCCCCCccCCcCCc---
Q 047433 514 -LGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHM--------NALWVFGGARSKILSSPVNNVQESYGEN--- 581 (614)
Q Consensus 514 -~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqm--------ea~~lF~~Ai~k~~~~~~~~~~e~~~~~--- 581 (614)
++++++..+.++++.+|++...-... . ++...+++.- ++...+.+++..++.....-.+......
T Consensus 139 ~~~~~EL~~~~k~L~~dpkNy~AW~~R--~-wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~ 215 (349)
T 3q7a_A 139 QDPVSEIEYIHGSLLPDPKNYHTWAYL--H-WLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRP 215 (349)
T ss_dssp SCCHHHHHHHHHHTSSCTTCHHHHHHH--H-HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTST
T ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHH--H-HHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcc
Confidence 99999999999999999654332111 1 2222222211 3444556666666544322222211111
Q ss_pred ----ccchhhhHHHHHHHHHHhcccccCC
Q 047433 582 ----KSGIEEQRYCDMIRTMMEKKNLISG 606 (614)
Q Consensus 582 ----~~g~~eQ~~dD~iral~~~~~~~~g 606 (614)
....-+++++.+.++|..+|+..|.
T Consensus 216 ~~~~~~~~~~eELe~~~~aI~~~P~n~Sa 244 (349)
T 3q7a_A 216 GAETSSRSLQDELIYILKSIHLIPHNVSA 244 (349)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred ccccchHHHHHHHHHHHHHHHhCCCCHHH
Confidence 1223467889999999999887654
No 181
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.34 E-value=3.3e-06 Score=72.63 Aligned_cols=80 Identities=10% Similarity=-0.013 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR--PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~--~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
......|+.+|..|+|..|+..|.+|++..+.. .......++.++|.||+++|+++.|+..+++|++++|+ +..+
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~---~~~~ 82 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE---HQRA 82 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC---CHHH
Confidence 356789999999999999999999999975322 13456889999999999999999999999999999999 8888
Q ss_pred HHHHH
Q 047433 502 LWRRS 506 (614)
Q Consensus 502 yyRRA 506 (614)
..+++
T Consensus 83 ~~n~~ 87 (104)
T 2v5f_A 83 NGNLK 87 (104)
T ss_dssp HHHHH
T ss_pred HhhHH
Confidence 77776
No 182
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.34 E-value=1.2e-05 Score=86.61 Aligned_cols=100 Identities=10% Similarity=-0.059 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHH-HHHcCCcHHHHHHHHHHHhcCCCCCccHHHHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQC-HLLLREPDAAISDATRALCLSNPPNSHCKSLW 503 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~-ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyy 503 (614)
.|...|+.+.+.|++++|+..|.+|++..|.. ...+...+.. +...|++++|...++++++.+|+ +..+|.
T Consensus 358 ~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~-----~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~---~~~~~~ 429 (530)
T 2ooe_A 358 VYIQYMKFARRAEGIKSGRMIFKKAREDARTR-----HHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGD---IPEYVL 429 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC-----THHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTT---CHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc-----hHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCC---CHHHHH
Confidence 56677777777788888888888888877765 4555544443 44678888888888888888888 788888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 504 RRSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 504 RRA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
..+..+..+|++++|...|+++++..|.+
T Consensus 430 ~~~~~~~~~g~~~~Ar~~~~~al~~~~~~ 458 (530)
T 2ooe_A 430 AYIDYLSHLNEDNNTRVLFERVLTSGSLP 458 (530)
T ss_dssp HHHHHHTTTTCHHHHHHHHHHHHHSCCSC
T ss_pred HHHHHHHhCCCHhhHHHHHHHHHhccCCC
Confidence 88888888888888888888888876643
No 183
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.29 E-value=6.2e-06 Score=83.48 Aligned_cols=107 Identities=11% Similarity=-0.068 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-cchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC-----Ccc
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRP-KNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP-----NSH 498 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~-~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~-----~~~ 498 (614)
.+...|..++..|++++|+..|.+++.+.|... ......++.++|.++...|++++|+..+++++++.+.. +..
T Consensus 55 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~ 134 (373)
T 1hz4_A 55 ATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMH 134 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHH
Confidence 344555555555555555555555555543321 11223345555555555555555555555555543110 003
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 499 CKSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 499 ~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
..++..+|.++..+|++++|...+++++...+.
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 135 EFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 344555555555555555555555555555543
No 184
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.27 E-value=4.1e-06 Score=70.11 Aligned_cols=69 Identities=13% Similarity=0.024 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 461 RMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 461 ~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
.+..+.++|.+++..|++++|+..+.++++++|. +..+++.+|.++..+|++++|+..|+++++..|+.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPT---NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc---cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 3678999999999999999999999999999999 99999999999999999999999999999998743
No 185
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.25 E-value=2.5e-05 Score=74.44 Aligned_cols=99 Identities=7% Similarity=-0.172 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCC--CCCcchhHHHHHHHHHHHHH----cCCcHHHHHHHHHHHhc
Q 047433 422 LVGLIKQEAKHLFW----LGEIEEAAMKYTEALGVCP--SRPKNERMVLYSNRAQCHLL----LREPDAAISDATRALCL 491 (614)
Q Consensus 422 ~A~~lK~~GN~lFk----~GdyeeAI~~YtkAIel~P--~~~~~~~a~lysNRA~~ylk----LGdyeeAI~D~~~ALeL 491 (614)
.+..+...|..++. .+++++|+..|.+|++..| .. +.++.|+|.+|.. .+++++|+..+++|+++
T Consensus 84 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~-----~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 84 SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAA-----VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHH-----HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcch-----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 34567888888887 8999999999999999888 34 7899999999999 89999999999999999
Q ss_pred CCCCCccHHHHHHHHHHHHHc-C-----CHHHHHHHHHHHHHcC
Q 047433 492 SNPPNSHCKSLWRRSQAYDMK-G-----LGRESLMDCIMFINGC 529 (614)
Q Consensus 492 dP~~~~~~KAyyRRA~Al~~L-G-----~yeEAL~df~kALkl~ 529 (614)
|. +..+++.+|.+|..- | ++++|+..|+++++..
T Consensus 159 -~~---~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g 198 (212)
T 3rjv_A 159 -SR---TGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEG 198 (212)
T ss_dssp -SC---TTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHT
T ss_pred -CC---CHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 55 678999999999875 3 8999999999999984
No 186
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.23 E-value=7e-06 Score=88.55 Aligned_cols=105 Identities=8% Similarity=-0.028 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc-----CCCC
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR---PKNERMVLYSNRAQCHLLLREPDAAISDATRALCL-----SNPP 495 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~---~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL-----dP~~ 495 (614)
.........+..+|+|++|+..|.+++++.-.- .....+..+.|+|.+|..+|+|++|+..+.++|++ .|++
T Consensus 288 ~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~H 367 (429)
T 3qwp_A 288 QESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSH 367 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCC
Confidence 344455666778999999999999999874321 24567889999999999999999999999999965 3442
Q ss_pred CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 047433 496 NSHCKSLWRRSQAYDMKGLGRESLMDCIMFING 528 (614)
Q Consensus 496 ~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl 528 (614)
+.-...++++|.+|..+|++++|+..|++|+++
T Consensus 368 p~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 368 PVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 335689999999999999999999999999976
No 187
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.21 E-value=7.6e-06 Score=82.83 Aligned_cols=110 Identities=14% Similarity=-0.043 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCc---c
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNS---H 498 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~---~ 498 (614)
.+..+...|..++..|++++|+..+.+++...|.........++.++|.++...|++++|+..+.+++.+.|.... .
T Consensus 13 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 92 (373)
T 1hz4_A 13 HAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYA 92 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 4556778899999999999999999999999886544456678999999999999999999999999998765211 2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 499 CKSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 499 ~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
..++..+|.++..+|++++|+..|++++++.+.
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~ 125 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINE 125 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 345788999999999999999999999998653
No 188
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.16 E-value=9.5e-06 Score=76.51 Aligned_cols=105 Identities=10% Similarity=-0.029 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcC---CcHHHHHHHHHHHhcC-C-CCCccHHHHHHHHHHHHHcC
Q 047433 439 IEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLR---EPDAAISDATRALCLS-N-PPNSHCKSLWRRSQAYDMKG 513 (614)
Q Consensus 439 yeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLG---dyeeAI~D~~~ALeLd-P-~~~~~~KAyyRRA~Al~~LG 513 (614)
...+...|.+.++..|.+ ..+.+|.|.|+.+.+ +++++|..++.+++.+ | . +.+++|.+|.+++.+|
T Consensus 14 l~~~~~~y~~e~~~~~~~-----~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~---~rd~lY~LAv~~~kl~ 85 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVS-----KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEE---QRDYVFYLAVGNYRLK 85 (152)
T ss_dssp HHHHHHHHHHHHHTTCCC-----HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHH---HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHccCCCc-----HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccc---hHHHHHHHHHHHHHcc
Confidence 355677788888888877 999999999999998 7779999999999999 7 5 7899999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHH
Q 047433 514 LGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWV 558 (614)
Q Consensus 514 ~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~l 558 (614)
+|++|+..++++|+..|++..+. ....++.+.+.+.+.
T Consensus 86 ~Y~~A~~y~~~lL~ieP~n~QA~-------~Lk~~ie~~~~kdgl 123 (152)
T 1pc2_A 86 EYEKALKYVRGLLQTEPQNNQAK-------ELERLIDKAMKKDGL 123 (152)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHH-------HHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhcCCCCHHHH-------HHHHHHHHHHHHhhH
Confidence 99999999999999998533221 334455555555433
No 189
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.12 E-value=1.1e-05 Score=76.84 Aligned_cols=96 Identities=9% Similarity=-0.171 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHcC----CHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHH----cCCcHHHHHHHHHHHhcCC
Q 047433 422 LVGLIKQEAKHLFWLG----EIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLL----LREPDAAISDATRALCLSN 493 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~G----dyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylk----LGdyeeAI~D~~~ALeLdP 493 (614)
.+..+...|..+.. + ++++|+..|.+|++ +.+ +.++.|+|.+|.. .+++++|+..+++|++.+|
T Consensus 49 ~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~-----~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 120 (212)
T 3rjv_A 49 DGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGS-----KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSE 120 (212)
T ss_dssp CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTC-----HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTT
T ss_pred CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCC-----HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCC
Confidence 34567788888877 6 89999999999976 455 8899999999998 8999999999999999988
Q ss_pred --CCCccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHc
Q 047433 494 --PPNSHCKSLWRRSQAYDM----KGLGRESLMDCIMFING 528 (614)
Q Consensus 494 --~~~~~~KAyyRRA~Al~~----LG~yeEAL~df~kALkl 528 (614)
. ++.+++.+|.+|.. .+++++|+..|+++++.
T Consensus 121 ~~~---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 121 SDA---AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp SHH---HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred Ccc---hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 4 58999999999999 88999999999999988
No 190
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.11 E-value=1.4e-05 Score=82.24 Aligned_cols=102 Identities=9% Similarity=-0.185 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcC--CCCCccHHHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLS--NPPNSHCKSL 502 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLd--P~~~~~~KAy 502 (614)
.....|..+++.|+|++|+..|++++...+. .....+++++|.++..+|++++|+..+++++.-. |. ....++
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~---~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~--~~~da~ 211 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDK---FLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEA--CARAIA 211 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTT--THHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCc---ccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCcc--ccHHHH
Confidence 6788999999999999999999988775321 1124589999999999999999999999999654 43 156799
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
+++|.++..+|+.++|...|++++..+|+
T Consensus 212 ~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 212 WYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999995
No 191
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.10 E-value=7.4e-06 Score=84.31 Aligned_cols=133 Identities=10% Similarity=-0.161 Sum_probs=101.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCcc-HHHHHH
Q 047433 426 IKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSH-CKSLWR 504 (614)
Q Consensus 426 lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~-~KAyyR 504 (614)
....+..+...|+|++|.+.|+..+...|.+ . .++++|..+++.++|++|+..++.++...++ .. ..+++.
T Consensus 105 ~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~-----~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~--~~~~~a~~~ 176 (282)
T 4f3v_A 105 TMGFAACEAAQGNYADAMEALEAAPVAGSEH-----L-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDK--FLAGAAGVA 176 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTSSCCTTCHH-----H-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCH--HHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCch-----H-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCc--ccHHHHHHH
Confidence 4456788889999999999999999988876 6 9999999999999999999999988876433 02 358999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcC--CCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 047433 505 RSQAYDMKGLGRESLMDCIMFINGC--IRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKILS 568 (614)
Q Consensus 505 RA~Al~~LG~yeEAL~df~kALkl~--P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~~~ 568 (614)
+|.++..+|++++|+..|++++... |.. .++.... .-.+.+.+++.-++...|+++...++.
T Consensus 177 LG~al~~LG~~~eAl~~l~~a~~g~~~P~~-~~da~~~-~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 177 HGVAAANLALFTEAERRLTEANDSPAGEAC-ARAIAWY-LAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTSTTTTTT-HHHHHHH-HHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHCCCHHHHHHHHHHHhcCCCCccc-cHHHHHH-HHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999543 210 1121111 223444455556777888888776643
No 192
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.10 E-value=2.2e-05 Score=67.11 Aligned_cols=71 Identities=11% Similarity=-0.010 Sum_probs=66.7
Q ss_pred CCCCCcchhHHHHHHHHHHHHHcCC---cHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Q 047433 453 CPSRPKNERMVLYSNRAQCHLLLRE---PDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGC 529 (614)
Q Consensus 453 ~P~~~~~~~a~lysNRA~~ylkLGd---yeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~ 529 (614)
+|++ +.++..+|.+++..++ .++|...+++||++||+ ++.+++-+|..++..|+|++|+..++++++..
T Consensus 2 ~p~~-----~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~---~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 2 NAVT-----ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY---NEAALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp CCCC-----HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred CCCC-----HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 5777 9999999999987766 79999999999999999 99999999999999999999999999999999
Q ss_pred CC
Q 047433 530 IR 531 (614)
Q Consensus 530 P~ 531 (614)
|.
T Consensus 74 p~ 75 (93)
T 3bee_A 74 DP 75 (93)
T ss_dssp CT
T ss_pred CC
Confidence 86
No 193
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.06 E-value=2.7e-05 Score=85.53 Aligned_cols=107 Identities=9% Similarity=-0.049 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC----CCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc-----
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVC----PSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCL----- 491 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~----P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL----- 491 (614)
..+..+.+.|..+..+|+|++|+..|.++|++. +. .....+..++|+|.+|..+|+|++|+..+.+|+++
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~-~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~l 427 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHH-NNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTH 427 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCT-TCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh
Confidence 478899999999999999999999999999863 22 24567899999999999999999999999999975
Q ss_pred CCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 047433 492 SNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFING 528 (614)
Q Consensus 492 dP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl 528 (614)
.|+++.-.+.+-.+++++.++|.|++|...|+++.+-
T Consensus 428 G~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 428 GPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5663334577788999999999999999999998764
No 194
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.03 E-value=0.00011 Score=75.23 Aligned_cols=109 Identities=8% Similarity=-0.115 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCC----
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPN---- 496 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~---- 496 (614)
.+..+...|+.++..|+|.+|+..+.+++...... .+...+.++.+.+.+|..+|+|++|...+++++.+.+..+
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 213 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQ 213 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchH
Confidence 35578889999999999999999999999875432 3567789999999999999999999999999998754321
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 497 SHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 497 ~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
.....+...|..+...|+|++|..+|.++++..+
T Consensus 214 ~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~ 247 (434)
T 4b4t_Q 214 TVAELDLMSGILHCEDKDYKTAFSYFFESFESYH 247 (434)
T ss_dssp HHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 1245677788999999999999999999998643
No 195
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.97 E-value=0.00083 Score=71.39 Aligned_cols=162 Identities=12% Similarity=-0.110 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHc-----CCcHHHHHHHHHHHhcCC
Q 047433 423 VGLIKQEAKHLFW----LGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLL-----REPDAAISDATRALCLSN 493 (614)
Q Consensus 423 A~~lK~~GN~lFk----~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkL-----GdyeeAI~D~~~ALeLdP 493 (614)
+......|..+.. .+++++|+..|+++++. .+ +.++.++|.+|... +++++|+..++++++.+
T Consensus 255 ~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~--~~-----~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~- 326 (490)
T 2xm6_A 255 SIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQ--GN-----SDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQG- 326 (490)
T ss_dssp HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTT--TC-----HHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHc--CC-----HHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcC-
Confidence 4466777777777 78888888888888765 33 67888888888887 88888888888888764
Q ss_pred CCCccHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHH---HHHHHHHHHHHhhhhhcCC
Q 047433 494 PPNSHCKSLWRRSQAYDMKG---LGRESLMDCIMFINGCIRSETTSKRVKIPYYAARM---ISKHMNALWVFGGARSKIL 567 (614)
Q Consensus 494 ~~~~~~KAyyRRA~Al~~LG---~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~---i~Kqmea~~lF~~Ai~k~~ 567 (614)
+..+++++|.+|...| ++++|+..|+++++.. ++.....+......- .....++...|.+++....
T Consensus 327 ----~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~~----~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~~ 398 (490)
T 2xm6_A 327 ----DATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAKG----EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGL 398 (490)
T ss_dssp ----CHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ----CHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHCC----CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCCC
Confidence 4578888888888766 7888888888888762 333222222111110 1122345566666665431
Q ss_pred CCCCCCccC----CcCCcccchhhhHHHHHHHHHHhccc
Q 047433 568 SSPVNNVQE----SYGENKSGIEEQRYCDMIRTMMEKKN 602 (614)
Q Consensus 568 ~~~~~~~~e----~~~~~~~g~~eQ~~dD~iral~~~~~ 602 (614)
+....+- ..+.+..+..+++...+.+++...|+
T Consensus 399 --~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 399 --SAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp --HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred --HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 1111111 12344466777777777787777654
No 196
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.93 E-value=0.0002 Score=76.11 Aligned_cols=97 Identities=11% Similarity=-0.044 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHH----cCCcHHHHHHHHHHHhcCCCC
Q 047433 423 VGLIKQEAKHLFWLG---EIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLL----LREPDAAISDATRALCLSNPP 495 (614)
Q Consensus 423 A~~lK~~GN~lFk~G---dyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylk----LGdyeeAI~D~~~ALeLdP~~ 495 (614)
+..+...|..++..| ++++|+..|+++++. .+ +.++.++|.+|.. .+++++|+..+++|++..
T Consensus 328 ~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~-----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--- 397 (490)
T 2xm6_A 328 ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GE-----KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--- 397 (490)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TC-----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CC-----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC---
Confidence 446778888888866 899999999999997 45 8999999999999 899999999999999864
Q ss_pred CccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCC
Q 047433 496 NSHCKSLWRRSQAYDM----KGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 496 ~~~~KAyyRRA~Al~~----LG~yeEAL~df~kALkl~P~ 531 (614)
+..+++++|.+|.. .+++++|+..|+++++..|+
T Consensus 398 --~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 398 --LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp --CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred --CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 56899999999999 89999999999999999853
No 197
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.90 E-value=0.0001 Score=78.69 Aligned_cols=98 Identities=16% Similarity=0.143 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHH-----------------------------
Q 047433 424 GLIKQEAKHLFWLGE---IEEAAMKYTEALGVCPSRPKNERMVLYSNRAQC----------------------------- 471 (614)
Q Consensus 424 ~~lK~~GN~lFk~Gd---yeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~----------------------------- 471 (614)
-.+..+|..++..++ +.+|+..|.+||+++|++ +.+|..++.|
T Consensus 197 ydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~-----a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~ 271 (372)
T 3ly7_A 197 LTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEF-----TYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLP 271 (372)
T ss_dssp HHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcc
Confidence 345566666665543 578899999999999987 5555544443
Q ss_pred ---------------HHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 472 ---------------HLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 472 ---------------ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
++..|++++|+..+++|+.++|+ .-+|.-+|.++...|++++|++.|.+|+.++|
T Consensus 272 ~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s----~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P 341 (372)
T 3ly7_A 272 ELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS----WLNYVLLGKVYEMKGMNREAADAYLTAFNLRP 341 (372)
T ss_dssp GGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred cCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 44467888888888888888765 56777778888888888888888888888877
No 198
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.85 E-value=0.00013 Score=65.47 Aligned_cols=89 Identities=4% Similarity=-0.259 Sum_probs=82.1
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHH----cCCcHHHHHHHHHHHhcCCCCCccHHHHHH
Q 047433 429 EAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLL----LREPDAAISDATRALCLSNPPNSHCKSLWR 504 (614)
Q Consensus 429 ~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylk----LGdyeeAI~D~~~ALeLdP~~~~~~KAyyR 504 (614)
.|..++..+.+++|+..|++|.+. .+ +.+++|+|.+|.. .+++++|+..+++|.+. . ++.++++
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~-----~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g---~~~a~~~ 98 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NS-----GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--N---DQDGCLI 98 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TC-----HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--T---CHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CC-----HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--C---CHHHHHH
Confidence 788888888899999999999997 45 8999999999999 89999999999999987 4 6899999
Q ss_pred HHHHHHH----cCCHHHHHHHHHHHHHcC
Q 047433 505 RSQAYDM----KGLGRESLMDCIMFINGC 529 (614)
Q Consensus 505 RA~Al~~----LG~yeEAL~df~kALkl~ 529 (614)
+|.+|.. .+++++|+..|+++.+..
T Consensus 99 Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 99 LGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 9999999 999999999999999983
No 199
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.80 E-value=9.1e-05 Score=75.97 Aligned_cols=107 Identities=8% Similarity=-0.086 Sum_probs=84.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCC---CCccHHHHH
Q 047433 428 QEAKHLFWLGEIEEAAMKYTEALGVCPSR-PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNP---PNSHCKSLW 503 (614)
Q Consensus 428 ~~GN~lFk~GdyeeAI~~YtkAIel~P~~-~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~---~~~~~KAyy 503 (614)
..|......|+++.|+..|++++...+.. ....++.++.++|.+|...|+|.+|+..+.+++..-.. .+....++.
T Consensus 100 ~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~ 179 (434)
T 4b4t_Q 100 LIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHL 179 (434)
T ss_dssp HHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHH
Confidence 34555556788888888888888775442 23456889999999999999999999999999875221 122678999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCCCC
Q 047433 504 RRSQAYDMKGLGRESLMDCIMFINGCIRSET 534 (614)
Q Consensus 504 RRA~Al~~LG~yeEAL~df~kALkl~P~~~D 534 (614)
..|.+|..+|++++|...|+++++..+...+
T Consensus 180 ~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 210 (434)
T 4b4t_Q 180 LESKVYHKLRNLAKSKASLTAARTAANSIYC 210 (434)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999988654443
No 200
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.75 E-value=0.00028 Score=60.18 Aligned_cols=68 Identities=21% Similarity=0.217 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCC
Q 047433 422 LVGLIKQEAKHLFWLGE---IEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNP 494 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~Gd---yeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~ 494 (614)
.+..+...|..++..++ ..+|...+.+||+++|++ +.++..+|..+++.|+|++||..++++++.+|.
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~-----~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN-----EAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 34567888999976665 799999999999999999 999999999999999999999999999999998
No 201
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.72 E-value=0.0011 Score=69.03 Aligned_cols=105 Identities=16% Similarity=-0.012 Sum_probs=83.2
Q ss_pred CCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc----------CCCCCccHHHHHHHH
Q 047433 437 GEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCL----------SNPPNSHCKSLWRRS 506 (614)
Q Consensus 437 GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL----------dP~~~~~~KAyyRRA 506 (614)
+++++|+..|+++.+..|+. ....++.| +++++|+|++|..+++.++++ +|+ ++.++.++.
T Consensus 192 ~~~q~A~~~f~El~~~~p~~---~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~---~~~~LaN~i 262 (310)
T 3mv2_B 192 ETATSNFYYYEELSQTFPTW---KTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLY---KPTFLANQI 262 (310)
T ss_dssp STTTHHHHHHHHHHTTSCSH---HHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSS---HHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCc---ccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCC---CHHHHHHHH
Confidence 38999999999999888861 00455666 899999999999999988887 588 999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHHHHHHHHHHHHHHHHHHhhhhhcC
Q 047433 507 QAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPYYAARMISKHMNALWVFGGARSKI 566 (614)
Q Consensus 507 ~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~y~~r~i~Kqmea~~lF~~Ai~k~ 566 (614)
.+...+|+ +|.+.+.++.+..|++ |- +....++...|.+++.+-
T Consensus 263 ~l~~~lgk--~a~~l~~qL~~~~P~h--p~------------i~d~~~k~~~Fd~~~~ky 306 (310)
T 3mv2_B 263 TLALMQGL--DTEDLTNQLVKLDHEH--AF------------IKHHQEIDAKFDELVRKY 306 (310)
T ss_dssp HHHHHTTC--TTHHHHHHHHHTTCCC--HH------------HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhCh--HHHHHHHHHHHhCCCC--hH------------HHHHHHHHHHHHHHHHHh
Confidence 99999998 8999999999999853 22 222233455677776654
No 202
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.62 E-value=0.00091 Score=81.64 Aligned_cols=125 Identities=16% Similarity=0.055 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC--------
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP-------- 495 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~-------- 495 (614)
..+...|+.++..|+|++|+..|++| ..|..+|.||.++|+|++|++.+++|...++-.
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA-------------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve 1262 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV-------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVD 1262 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh-------------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 35678999999999999999999986 258999999999999999999999995444300
Q ss_pred --------------CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchH-HHHHHHHHHHHHHHHHHh
Q 047433 496 --------------NSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIP-YYAARMISKHMNALWVFG 560 (614)
Q Consensus 496 --------------~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~-~y~~r~i~Kqmea~~lF~ 560 (614)
..+++-+...+..|...|.|++|+..|+.++.++|.+..- ...+. .|....-.+.|+....|.
T Consensus 1263 ~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gm--ftELaiLyaKy~peklmEhlk~f~ 1340 (1630)
T 1xi4_A 1263 GKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGM--FTELAILYSKFKPQKMREHLELFW 1340 (1630)
T ss_pred hhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHH--HHHHHHHHHhCCHHHHHHHHHHHH
Confidence 0034456677888999999999999999999997643221 11111 123333455566666666
Q ss_pred hhh
Q 047433 561 GAR 563 (614)
Q Consensus 561 ~Ai 563 (614)
..+
T Consensus 1341 ~ri 1343 (1630)
T 1xi4_A 1341 SRV 1343 (1630)
T ss_pred Hhc
Confidence 543
No 203
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.59 E-value=0.00039 Score=59.45 Aligned_cols=72 Identities=10% Similarity=-0.176 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC----CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 462 MVLYSNRAQCHLLLREPDAAISDATRALCLSNPP----NSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 462 a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~----~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
+.-...+|..+++.|+|..|+.-+..|++..+.. ......+..+|.+++++|++++|+..+++++++.|++.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 5567889999999999999999999999874211 12678999999999999999999999999999999643
No 204
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.48 E-value=0.00038 Score=74.29 Aligned_cols=91 Identities=9% Similarity=-0.184 Sum_probs=41.2
Q ss_pred HHHHHHHHHHcC---CHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHc----CCcHHHHHHHHHHHhcCCCCCcc
Q 047433 426 IKQEAKHLFWLG---EIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLL----REPDAAISDATRALCLSNPPNSH 498 (614)
Q Consensus 426 lK~~GN~lFk~G---dyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkL----GdyeeAI~D~~~ALeLdP~~~~~ 498 (614)
+...|..+...| ++++|+..|.++++..|.. +..++|+|.+|... +++++|+..++++. |. +
T Consensus 179 ~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~-----a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g---~ 247 (452)
T 3e4b_A 179 YVELATVYQKKQQPEQQAELLKQMEAGVSRGTVT-----AQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PG---Y 247 (452)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSC-----HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GG---S
T ss_pred HHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHH-----HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CC---C
Confidence 334444444444 4444444444444444444 44444444444333 34444444444444 33 4
Q ss_pred HHHHHHHHHH-H--HHcCCHHHHHHHHHHHHH
Q 047433 499 CKSLWRRSQA-Y--DMKGLGRESLMDCIMFIN 527 (614)
Q Consensus 499 ~KAyyRRA~A-l--~~LG~yeEAL~df~kALk 527 (614)
+.+++++|.+ + ...|++++|+..|+++++
T Consensus 248 ~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~ 279 (452)
T 3e4b_A 248 PASWVSLAQLLYDFPELGDVEQMMKYLDNGRA 279 (452)
T ss_dssp THHHHHHHHHHHHSGGGCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 4444444444 2 234444444444444443
No 205
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.44 E-value=0.00053 Score=71.08 Aligned_cols=87 Identities=9% Similarity=-0.081 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHc-----CCcHHHHHHHHHHHhcCCCCCcc-HHHHHHHHHHHHH-
Q 047433 439 IEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLL-----REPDAAISDATRALCLSNPPNSH-CKSLWRRSQAYDM- 511 (614)
Q Consensus 439 yeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkL-----GdyeeAI~D~~~ALeLdP~~~~~-~KAyyRRA~Al~~- 511 (614)
...|.....+||+++|+. .-..+|.-+|..|.++ |+.++|...+++||+++|+ . ..+++-.|..+..
T Consensus 179 l~~A~a~lerAleLDP~~---~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~---~~id~~v~YA~~l~~~ 252 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSY---QEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSA---HDPDHHITYADALCIP 252 (301)
T ss_dssp HHHHHHHHHHHHHHCTTH---HHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCT---TCSHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHhCCCc---ccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCC---CCchHHHHHHHHHHHh
Confidence 478999999999999993 1177999999999996 9999999999999999997 5 8999999999988
Q ss_pred cCCHHHHHHHHHHHHHcCCC
Q 047433 512 KGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 512 LG~yeEAL~df~kALkl~P~ 531 (614)
.|++++|...+++++...|.
T Consensus 253 ~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 253 LNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp TTCHHHHHHHHHHHHHCCGG
T ss_pred cCCHHHHHHHHHHHHcCCCC
Confidence 59999999999999999875
No 206
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.44 E-value=0.00012 Score=79.76 Aligned_cols=163 Identities=14% Similarity=-0.036 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
.+..+...|+.+++.|+|++|++.|.+| .+ +..|.+.+.++...|+|+.|...... |..+|+ -
T Consensus 147 ~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~-----~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad------~ 209 (449)
T 1b89_A 147 NVSNFGRLASTLVHLGEYQAAVDGARKA-----NS-----TRTWKEVCFACVDGKEFRLAQMCGLH-IVVHAD------E 209 (449)
T ss_dssp HTTCHHHHHHHHHTTTCHHHHHHHHHHH-----TC-----HHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHH------H
T ss_pred HhhhHHHHHHHHHHhccHHHHHHHHHHc-----CC-----chhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHh------h
Confidence 3344555555555555555555555555 12 45555555555555555555433332 223333 3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcchHH-HHHHHHHHHHHHHHHHhhhhhcCCCCCC-CCccCCcC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVKIPY-YAARMISKHMNALWVFGGARSKILSSPV-NNVQESYG 579 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~kl~~-y~~r~i~Kqmea~~lF~~Ai~k~~~~~~-~~~~e~~~ 579 (614)
.......|...|++++|+..+++++.+++.+-. .-..++. |..-.-.|-|+....|...+.-.+--.. ........
T Consensus 210 l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~--~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e 287 (449)
T 1b89_A 210 LEELINYYQDRGYFEELITMLEAALGLERAHMG--MFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAE 287 (449)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHH--HHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 445668899999999999999999999753321 1122211 2333356667777777765433210000 11111222
Q ss_pred CcccchhhhHHHHHHHHHHhcccc
Q 047433 580 ENKSGIEEQRYCDMIRTMMEKKNL 603 (614)
Q Consensus 580 ~~~~g~~eQ~~dD~iral~~~~~~ 603 (614)
..-.....+++|.+.-+|++.|..
T Consensus 288 ~~~ly~~~~e~d~A~~tm~~h~~~ 311 (449)
T 1b89_A 288 LVFLYDKYEEYDNAIITMMNHPTD 311 (449)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSTTT
T ss_pred HHHHHHhhchHHHHHHHHHhCChh
Confidence 333455567888888888888755
No 207
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.37 E-value=0.0034 Score=66.91 Aligned_cols=43 Identities=14% Similarity=0.184 Sum_probs=25.9
Q ss_pred HhhcccccCCCcchhhhhhHHHHhcc---ChhHHHHHHHHHHHHhh
Q 047433 307 ENLCNLSRSSDDWQYMGIDCLLFLLK---DPDTRYKVIETAALFLI 349 (614)
Q Consensus 307 ~~lc~~srssd~w~y~~idcll~Llk---d~~try~v~dka~~aLv 349 (614)
+.++..+...+.-.+..++.+..-.+ |.+.....+.+++..-+
T Consensus 165 ~~~~~~a~~~~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~ 210 (452)
T 3e4b_A 165 ERICKAALNTTDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGT 210 (452)
T ss_dssp HHHHHHHTTTCTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCC
Confidence 33444444445556777777777666 66666666666655433
No 208
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.27 E-value=0.0018 Score=59.20 Aligned_cols=86 Identities=9% Similarity=-0.061 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHH---HHHHHHHHHhcC-C-CCCccHHHHHHHHHHHHHcC
Q 047433 439 IEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDA---AISDATRALCLS-N-PPNSHCKSLWRRSQAYDMKG 513 (614)
Q Consensus 439 yeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyee---AI~D~~~ALeLd-P-~~~~~~KAyyRRA~Al~~LG 513 (614)
...+...|.+++...+.. ...-+|.|-++++..+... +|.-+...++-+ | . ..+.+|.+|.+++++|
T Consensus 17 l~~~~~~y~~e~~~~~~s-----~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~---~Rd~lY~LAvg~yklg 88 (126)
T 1nzn_A 17 LLKFEKKFQSEKAAGSVS-----KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEE---QRDYVFYLAVGNYRLK 88 (126)
T ss_dssp HHHHHHHHHHHHHHSCCC-----HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHH---HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccCCCc-----HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcch---HHHHHHHHHHHHHHhh
Confidence 345566677777777776 8999999999999887777 999999998877 5 4 6789999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCC
Q 047433 514 LGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 514 ~yeEAL~df~kALkl~P~~ 532 (614)
+|++|+..++.+|+..|++
T Consensus 89 ~Y~~A~~~~~~lL~~eP~n 107 (126)
T 1nzn_A 89 EYEKALKYVRGLLQTEPQN 107 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999853
No 209
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.25 E-value=0.0013 Score=58.77 Aligned_cols=78 Identities=10% Similarity=-0.090 Sum_probs=70.7
Q ss_pred CCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHH----c
Q 047433 437 GEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDM----K 512 (614)
Q Consensus 437 GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~----L 512 (614)
+++++|+..|+++.+..... +. +|.+|...+.+++|+..+++|.+. . +..+++++|.+|.. .
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~-----a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g---~~~a~~~Lg~~y~~G~g~~ 74 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMF-----GC----LSLVSNSQINKQKLFQYLSKACEL--N---SGNGCRFLGDFYENGKYVK 74 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTT-----HH----HHHHTCTTSCHHHHHHHHHHHHHT--T---CHHHHHHHHHHHHHCSSSC
T ss_pred cCHHHHHHHHHHHHcCCCHh-----hh----HHHHHHcCCCHHHHHHHHHHHHcC--C---CHHHHHHHHHHHHcCCCCC
Confidence 47899999999999987654 33 999999999999999999999987 4 68999999999999 8
Q ss_pred CCHHHHHHHHHHHHHc
Q 047433 513 GLGRESLMDCIMFING 528 (614)
Q Consensus 513 G~yeEAL~df~kALkl 528 (614)
+++++|+..|+++.+.
T Consensus 75 ~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 75 KDLRKAAQYYSKACGL 90 (138)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHcC
Confidence 9999999999999987
No 210
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.18 E-value=0.0011 Score=62.31 Aligned_cols=79 Identities=14% Similarity=-0.050 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhC-CCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCcc
Q 047433 423 VGLIKQEAKHLFWLG---EIEEAAMKYTEALGVC-PSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSH 498 (614)
Q Consensus 423 A~~lK~~GN~lFk~G---dyeeAI~~YtkAIel~-P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~ 498 (614)
.+...+.|..+.+.+ +++++|..+++.++.+ |. ....+++|+|..|+++|+|++|.+.++++|+++|+ |
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~----~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~---n 104 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKE----EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQ---N 104 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHH----HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT---C
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcc----chHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC---C
Confidence 346777888888888 7889999999999988 62 23789999999999999999999999999999999 8
Q ss_pred HHHHHHHHHH
Q 047433 499 CKSLWRRSQA 508 (614)
Q Consensus 499 ~KAyyRRA~A 508 (614)
..|..-+-.+
T Consensus 105 ~QA~~Lk~~i 114 (152)
T 1pc2_A 105 NQAKELERLI 114 (152)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7776544433
No 211
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.17 E-value=0.0019 Score=78.88 Aligned_cols=94 Identities=17% Similarity=0.018 Sum_probs=76.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHH--------------------hhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHH
Q 047433 427 KQEAKHLFWLGEIEEAAMKYTEAL--------------------GVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDAT 486 (614)
Q Consensus 427 K~~GN~lFk~GdyeeAI~~YtkAI--------------------el~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~ 486 (614)
.+-|..+...|.|++|+..|.++- +..+ +-..+.+|+++|.++.+.|++++||..|.
T Consensus 1053 ~eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Ae---rvn~p~vWsqLAKAql~~G~~kEAIdsYi 1129 (1630)
T 1xi4_A 1053 PDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAE---RCNEPAVWSQLAKAQLQKGMVKEAIDSYI 1129 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHH---hcCCHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 335777788888888877776542 2221 11237899999999999999999999998
Q ss_pred HHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 047433 487 RALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIR 531 (614)
Q Consensus 487 ~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~ 531 (614)
+| + +..+|++.|.++..+|+|++|++.|+++.+..+.
T Consensus 1130 KA-----d---D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1130 KA-----D---DPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred hc-----C---ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 87 5 7899999999999999999999999999998753
No 212
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.10 E-value=0.002 Score=61.53 Aligned_cols=100 Identities=12% Similarity=0.078 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC----CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCC---CC--
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR----PKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSN---PP-- 495 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~----~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP---~~-- 495 (614)
.+.++...++..|.|+.|+..++.++.+..++ .......++...|++++..++|..|...|++||.+.- ..
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 57888999999999999999999988775322 3456778999999999999999999999999986521 10
Q ss_pred -----------------CccHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 047433 496 -----------------NSHCKSLWRRSQAYDMKGLGRESLMDCIM 524 (614)
Q Consensus 496 -----------------~~~~KAyyRRA~Al~~LG~yeEAL~df~k 524 (614)
......-|+.|.||.++|++++|+..++.
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 00136889999999999999999987544
No 213
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=96.98 E-value=0.0028 Score=68.52 Aligned_cols=70 Identities=10% Similarity=0.098 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC----CCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVC----PSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCL 491 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~----P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL 491 (614)
..+..+.+.|..+..+|+|++|+..|.++|++. +. .....+..++|+|.+|..+|+|++|+..+.+|+++
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~-~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPV-YSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCS-SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCC-CChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999862 22 24667899999999999999999999999999975
No 214
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.94 E-value=0.0035 Score=67.51 Aligned_cols=91 Identities=13% Similarity=0.020 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC----CCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc-----
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVC----PSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCL----- 491 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~----P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL----- 491 (614)
..+..+.+.|..+...|+|++|+..|.++|++. |. .....+..++|+|.+|..+|+|++|+..+.+|+++
T Consensus 327 ~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~-~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~l 405 (429)
T 3qwp_A 327 YQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPG-SHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTH 405 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCS-SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCC-CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc
Confidence 367789999999999999999999999999763 33 25667899999999999999999999999999975
Q ss_pred CCCCCccHHHHHHHHHHHHHc
Q 047433 492 SNPPNSHCKSLWRRSQAYDMK 512 (614)
Q Consensus 492 dP~~~~~~KAyyRRA~Al~~L 512 (614)
.|+++.-.+++..++.++.++
T Consensus 406 G~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 406 GREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp CTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHH
Confidence 555222345556667766554
No 215
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.91 E-value=0.0048 Score=64.23 Aligned_cols=100 Identities=8% Similarity=-0.037 Sum_probs=80.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCC--CCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC-CccHHHH
Q 047433 426 IKQEAKHLFWLGEIEEAAMKYTEALGVCP--SRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP-NSHCKSL 502 (614)
Q Consensus 426 lK~~GN~lFk~GdyeeAI~~YtkAIel~P--~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~-~~~~KAy 502 (614)
+...|..++..|++++|+..+.++|...| .. ..++.-.+++++++|+++.|.+.+++..+.+|+. -..-...
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~-----lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l 177 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAEGT-----TELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMI 177 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTH-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHH
Confidence 45788888999999999999999999887 55 8899999999999999999999999999999810 0002445
Q ss_pred HHHHHH--HHHcC--CHHHHHHHHHHHHHcCC
Q 047433 503 WRRSQA--YDMKG--LGRESLMDCIMFINGCI 530 (614)
Q Consensus 503 yRRA~A--l~~LG--~yeEAL~df~kALkl~P 530 (614)
..++.+ ....| ++.+|...|+++....|
T Consensus 178 ~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p 209 (310)
T 3mv2_B 178 LNLAESYIKFATNKETATSNFYYYEELSQTFP 209 (310)
T ss_dssp HHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHhCC
Confidence 555555 55556 99999999999888776
No 216
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=96.50 E-value=0.0011 Score=69.79 Aligned_cols=118 Identities=16% Similarity=0.149 Sum_probs=75.7
Q ss_pred CCCCCcccchhHhhHHHHHhhcCCCCCCCccccHHHHHHHHHHhhc---------------------------CC--ccc
Q 047433 49 MPLQDDQQHVLALSGLWNIAMTQPDDPLFPALGIFNCMSSLISKGV---------------------------NN--RDW 99 (614)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~lg~~~~~~~l~~~~~---------------------------~~--~~~ 99 (614)
||..++.....++..|+|+|-..-+=..+.+.|+.+.+..|+.... .+ ..+
T Consensus 41 ~~~~~~~~~~~A~~aL~nls~d~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~ 120 (354)
T 3nmw_A 41 MPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKA 120 (354)
T ss_dssp CCCGGGGTHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 7777777666789999999975323335678899999999985321 11 111
Q ss_pred cccCCcccchh--------------hhhhhhhccccc-hHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhh
Q 047433 100 LLRDQNIYIPY--------------YAAHVIGSYTMN-KVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLAS 164 (614)
Q Consensus 100 ~~~~~~~~~~y--------------y~ah~~gsy~~~-~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~ 164 (614)
.....+=.||. .|+-.++.-+.+ .++....-+++|+||+|+++|...-+.--++.|++||++|++
T Consensus 121 ~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~ 200 (354)
T 3nmw_A 121 TLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSA 200 (354)
T ss_dssp HHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHc
Confidence 11111112443 344455555554 234445556899999999986443366678899999999998
Q ss_pred cc
Q 047433 165 YD 166 (614)
Q Consensus 165 ~~ 166 (614)
+.
T Consensus 201 ~~ 202 (354)
T 3nmw_A 201 HC 202 (354)
T ss_dssp TC
T ss_pred cC
Confidence 54
No 217
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.28 E-value=0.039 Score=58.41 Aligned_cols=101 Identities=13% Similarity=0.047 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-----------------CcchhHHHHHHHHHHHHHcCCcHHHHHHHH
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR-----------------PKNERMVLYSNRAQCHLLLREPDAAISDAT 486 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~-----------------~~~~~a~lysNRA~~ylkLGdyeeAI~D~~ 486 (614)
..+...|......|+.++|+..+.+|+.+-... ..+.+..+...++.+++.+|++.+|+..+.
T Consensus 116 ~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~ 195 (388)
T 2ff4_A 116 VAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELE 195 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 355566777777899999999999999875321 012344566778899999999999999999
Q ss_pred HHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 047433 487 RALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFIN 527 (614)
Q Consensus 487 ~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALk 527 (614)
+++..+|- +-.+|..+-.+|+..|+..+|+..|+++-+
T Consensus 196 ~~~~~~P~---~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 196 ALTFEHPY---REPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHSTT---CHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999 899999999999999999999999998865
No 218
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=95.90 E-value=0.0046 Score=59.33 Aligned_cols=117 Identities=17% Similarity=0.168 Sum_probs=87.7
Q ss_pred hHHHHhhhCCCCCcccchhHhhHHHHHhhc-CCCCCCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhcc
Q 047433 41 GVASFFKEMPLQDDQQHVLALSGLWNIAMT-QPDDPLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSY 119 (614)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy 119 (614)
..-.|++.|...|.+.+.-++..|.+++-. .++-..+.+.|++.-...|+ ++.+.-+=..|+.++|..
T Consensus 13 ~~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL-----------~~~~~~v~~~a~~~L~~l 81 (252)
T 4db8_A 13 ELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLL-----------SSPNEQILQEALWALSNI 81 (252)
T ss_dssp SHHHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGG-----------GCSCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHH-----------cCCCHHHHHHHHHHHHHH
Confidence 356677888777777777788888776554 22222455566666555554 334456778999999999
Q ss_pred ccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhcccch
Q 047433 120 TMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASYDRTF 169 (614)
Q Consensus 120 ~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f 169 (614)
+....+.....++.|+||+|+.+|+.. ++--|+.|+++|++|+..+..-
T Consensus 82 ~~~~~~~~~~i~~~g~i~~L~~lL~~~-~~~v~~~a~~~L~~l~~~~~~~ 130 (252)
T 4db8_A 82 ASGGNEQIQAVIDAGALPALVQLLSSP-NEQILQEALWALSNIASGGNEQ 130 (252)
T ss_dssp TTSCHHHHHHHHHTTHHHHHHHGGGCS-CHHHHHHHHHHHHHHTTSCHHH
T ss_pred hcCCHHHHHHHHHcCCHHHHHHHHcCC-CHHHHHHHHHHHHHhhcCCchH
Confidence 998889999999999999999999985 5667899999999998766543
No 219
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=95.84 E-value=0.037 Score=52.31 Aligned_cols=113 Identities=21% Similarity=0.187 Sum_probs=82.1
Q ss_pred HHHHhhhCCCCCcccchhHhhHHHHHhhcCC-CCCCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccc
Q 047433 42 VASFFKEMPLQDDQQHVLALSGLWNIAMTQP-DDPLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYT 120 (614)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~ 120 (614)
|..+.+-|-..|.+-+.-++..|.+++-..| +-..+.+.|++.-...++. +.+.-+=..|+.++|..+
T Consensus 4 i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~-----------~~~~~v~~~a~~~L~~l~ 72 (252)
T 4hxt_A 4 VEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLT-----------STDSEVQKEAARALANIA 72 (252)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT-----------CSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHh-----------CCCHHHHHHHHHHHHHHH
Confidence 3444455544443335567788888887665 2233444566665555543 345667789999999999
Q ss_pred cchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhcc
Q 047433 121 MNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASYD 166 (614)
Q Consensus 121 ~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 166 (614)
.+.++.....++.|+||+|+.+|+.. +.--++.|+++|++|+.+.
T Consensus 73 ~~~~~~~~~~~~~~~i~~l~~ll~~~-~~~v~~~a~~~L~~l~~~~ 117 (252)
T 4hxt_A 73 SGPDEAIKAIVDAGGVEVLVKLLTST-DSEVQKEAARALANIASGP 117 (252)
T ss_dssp TSCHHHHHHHHHTTHHHHHHHHTTCS-SHHHHHHHHHHHHHHTTSC
T ss_pred cCChHHHHHHHHCCCHHHHHHHHcCC-CHHHHHHHHHHHHHHHcCC
Confidence 99899999999999999999999964 4556889999999999643
No 220
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.71 E-value=0.23 Score=56.65 Aligned_cols=102 Identities=7% Similarity=-0.112 Sum_probs=79.2
Q ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHH
Q 047433 426 IKQEAKHLFWLG-EIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWR 504 (614)
Q Consensus 426 lK~~GN~lFk~G-dyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyR 504 (614)
+...+.-.++.+ +++.|...|.++|+..|++ ..++...+......|+.+.|-..+++|+...|+..-....|-.
T Consensus 472 yi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~-----~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~ 546 (679)
T 4e6h_A 472 YLENAYIEYHISKDTKTACKVLELGLKYFATD-----GEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQK 546 (679)
T ss_dssp HHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCc-----hHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 334444445544 5899999999999999988 8888888888888999999999999999988731114445555
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 505 RSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 505 RA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
...--...|+.+.+.+.++++++..|++
T Consensus 547 ~~~fE~~~G~~~~~~~v~~R~~~~~P~~ 574 (679)
T 4e6h_A 547 VIFFESKVGSLNSVRTLEKRFFEKFPEV 574 (679)
T ss_dssp HHHHHHHTCCSHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 5666667899999999999999999953
No 221
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.64 E-value=0.22 Score=57.58 Aligned_cols=62 Identities=18% Similarity=0.214 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRA 488 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~A 488 (614)
.+.-+..++.-+..+|+|+-|+..-.+|+...|.+ ...|..+|.||+++|+|+.|+--.+-.
T Consensus 336 ~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPse-----F~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 336 MSDLLNIQTNFLLNRGDYELALGVSNTSTELALDS-----FESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC-----HHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred chHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchh-----hHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 44567888999999999999999999999999999 999999999999999999998655443
No 222
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=95.61 E-value=0.043 Score=58.53 Aligned_cols=67 Identities=13% Similarity=0.030 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCC
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNP 494 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~ 494 (614)
.+..+...|..++..|++++|+..+++|+.++|+ ...|.-+|.++.-.|++++|+..+.+|+.++|.
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s------~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~ 342 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS------WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPG 342 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 4446777777788889999999999999999974 678899999999999999999999999999999
No 223
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.42 E-value=0.53 Score=50.40 Aligned_cols=103 Identities=12% Similarity=-0.089 Sum_probs=82.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCC-CCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCC--CCccHHHH--
Q 047433 428 QEAKHLFWLGEIEEAAMKYTEALGVCPS-RPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNP--PNSHCKSL-- 502 (614)
Q Consensus 428 ~~GN~lFk~GdyeeAI~~YtkAIel~P~-~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~--~~~~~KAy-- 502 (614)
..|.-++..|+|.+|+..+++.++-+.. +.+..+.+.+......|..++++.++-..++.|...... .++...+.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 6789999999999999999999987654 235678899999999999999999999999988755311 11234444
Q ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHHcCC
Q 047433 503 WRRSQAYD-MKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 503 yRRA~Al~-~LG~yeEAL~df~kALkl~P 530 (614)
..-|..+. ..++|.+|..+|-++++...
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~ 212 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEGFD 212 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHT
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhccc
Confidence 44577888 89999999999999986644
No 224
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=95.40 E-value=0.014 Score=54.34 Aligned_cols=98 Identities=22% Similarity=0.206 Sum_probs=74.8
Q ss_pred chhHhhHHHHHhhcCCCC-CCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCC
Q 047433 57 HVLALSGLWNIAMTQPDD-PLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGV 135 (614)
Q Consensus 57 ~~~~~~~~~~~~~~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~ 135 (614)
+.-++..|.+++...|+. ..+.+.|++.-+..|+. +.+.-|=..|+.++|..+....+.....++.|+
T Consensus 29 ~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~-----------~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~ 97 (210)
T 4db6_A 29 LQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLS-----------SPNEQILQEALWALSNIASGGNEQIQAVIDAGA 97 (210)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT-----------CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHc-----------CCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCC
Confidence 445777888887544332 23455577666666553 345566778999999999888899999999999
Q ss_pred chHHHHHhcccchhhHHHHHHHHhhhhhhcc
Q 047433 136 IPPLMELLRGKISWVEQRVAVRALGHLASYD 166 (614)
Q Consensus 136 ~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 166 (614)
||+|+.+|... +.--++.|+.+|++|+...
T Consensus 98 i~~L~~lL~~~-~~~v~~~a~~~L~~l~~~~ 127 (210)
T 4db6_A 98 LPALVQLLSSP-NEQILQEALWALSNIASGG 127 (210)
T ss_dssp HHHHHHHTTCS-CHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHcCC-cHHHHHHHHHHHHHHHcCC
Confidence 99999999877 5667889999999999754
No 225
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=95.18 E-value=0.025 Score=61.69 Aligned_cols=96 Identities=16% Similarity=-0.091 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHH
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCK 500 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~K 500 (614)
..+..|++.+..+...|+|+.|...... |...|+. ......+|.+.|++++|++.+++++.+++. +..
T Consensus 175 ~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~--------l~~lv~~Yek~G~~eEai~lLe~aL~le~a---h~~ 242 (449)
T 1b89_A 175 NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE--------LEELINYYQDRGYFEELITMLEAALGLERA---HMG 242 (449)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH--------HHHHHHHHHHTTCHHHHHHHHHHHTTSTTC---CHH
T ss_pred CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh--------HHHHHHHHHHCCCHHHHHHHHHHHhCCcHH---HHH
Confidence 4677889999999999999999887775 4455543 335778899999999999999999999999 999
Q ss_pred HHHHHHHHHHH--cCCHHHHHHHHHHHHHc
Q 047433 501 SLWRRSQAYDM--KGLGRESLMDCIMFING 528 (614)
Q Consensus 501 AyyRRA~Al~~--LG~yeEAL~df~kALkl 528 (614)
.+..+|.+|.+ .++..|+++.|...+++
T Consensus 243 ~ftel~il~~ky~p~k~~ehl~~~~~~ini 272 (449)
T 1b89_A 243 MFTELAILYSKFKPQKMREHLELFWSRVNI 272 (449)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHSTTSCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhcC
Confidence 99999998765 57777888877766655
No 226
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.02 E-value=0.16 Score=47.40 Aligned_cols=90 Identities=8% Similarity=-0.080 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHcCCc---HHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhh
Q 047433 462 MVLYSNRAQCHLLLREP---DAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKR 538 (614)
Q Consensus 462 a~lysNRA~~ylkLGdy---eeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k 538 (614)
...-+|.|-|+++..+. .++|.-++..++-+|. ....-+|.+|.+++++|+|++|....+.+|+..|++..+.
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~--~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~-- 114 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAES--RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG-- 114 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCS--THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHH--
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcc--chhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHH--
Confidence 78888999999987754 5789999999998884 1678899999999999999999999999999999533221
Q ss_pred cchHHHHHHHHHHHHHHHHHHh
Q 047433 539 VKIPYYAARMISKHMNALWVFG 560 (614)
Q Consensus 539 ~kl~~y~~r~i~Kqmea~~lF~ 560 (614)
-...++.+++.+.++.-
T Consensus 115 -----~Lk~~Ie~~i~kdGliG 131 (144)
T 1y8m_A 115 -----ALKSMVEDKIQKETLKG 131 (144)
T ss_dssp -----HHHHHHHHHHHHTTTTT
T ss_pred -----HHHHHHHHHHHHhchhh
Confidence 23345666666554433
No 227
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=95.00 E-value=0.15 Score=46.98 Aligned_cols=69 Identities=7% Similarity=-0.137 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHcCC---cHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 047433 462 MVLYSNRAQCHLLLRE---PDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 462 a~lysNRA~~ylkLGd---yeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~ 532 (614)
+..-+|.|-|+++..+ ...+|.-++..++-+|. ....-+|.+|.+++++|+|++|+...+.+|+..|++
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~--~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N 111 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAES--RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNN 111 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGG--GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTC
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcc--hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCC
Confidence 6778888888888764 45688888888888884 157889999999999999999999999999998853
No 228
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=94.63 E-value=0.082 Score=56.71 Aligned_cols=96 Identities=20% Similarity=0.195 Sum_probs=76.7
Q ss_pred hHhhHHHHHhhcCCCCCCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCCchH
Q 047433 59 LALSGLWNIAMTQPDDPLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIPP 138 (614)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~ 138 (614)
-++..|+|++...|+.+....-|++..+..|+ ++.+.-|=..|+.+++..+-...+..+..+..|+||+
T Consensus 222 ~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL-----------~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~ 290 (528)
T 4b8j_A 222 NATWTLSNFCRGKPQPSFEQTRPALPALARLI-----------HSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPR 290 (528)
T ss_dssp HHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHT-----------TCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHH-----------CCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHH
Confidence 47888999998876655555556666666655 2345566778999999999888888888899999999
Q ss_pred HHHHhcccchhhHHHHHHHHhhhhhhcc
Q 047433 139 LMELLRGKISWVEQRVAVRALGHLASYD 166 (614)
Q Consensus 139 l~~~~~~~~~wve~r~~~r~l~h~a~~~ 166 (614)
|+++|... ++--+..|+++||.|++..
T Consensus 291 Lv~lL~~~-~~~v~~~a~~~L~nl~~~~ 317 (528)
T 4b8j_A 291 LVELLLHP-SPSVLIPALRTVGNIVTGD 317 (528)
T ss_dssp HHHHTTCS-CHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHcCC-ChhHHHHHHHHHHHHHcCC
Confidence 99999877 5677899999999999854
No 229
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=94.59 E-value=0.027 Score=53.88 Aligned_cols=96 Identities=23% Similarity=0.216 Sum_probs=74.0
Q ss_pred hHhhHHHHHhhcCCCC-CCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCCch
Q 047433 59 LALSGLWNIAMTQPDD-PLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIP 137 (614)
Q Consensus 59 ~~~~~~~~~~~~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 137 (614)
.++..|+|++...++- ..+.+.|++.-+..++ ++.+.-+=..|+.++|..+....+..+..++.|+||
T Consensus 115 ~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL-----------~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~ 183 (252)
T 4db8_A 115 EALWALSNIASGGNEQIQAVIDAGALPALVQLL-----------SSPNEQILQEALWALSNIASGGNEQIQAVIDAGALP 183 (252)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGG-----------GCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHH
T ss_pred HHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHH-----------hCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHH
Confidence 5778888887765544 4455556665555544 334556778999999999998888888899999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhhhhhcc
Q 047433 138 PLMELLRGKISWVEQRVAVRALGHLASYD 166 (614)
Q Consensus 138 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 166 (614)
+|+++|... ..--++.|+++|+.|++..
T Consensus 184 ~L~~ll~~~-~~~v~~~a~~~L~~l~~~~ 211 (252)
T 4db8_A 184 ALVQLLSSP-NEQILQEALWALSNIASGG 211 (252)
T ss_dssp HHHHGGGCS-SHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHCCC-CHHHHHHHHHHHHHHhcCC
Confidence 999999987 4445889999999999654
No 230
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=94.59 E-value=0.028 Score=52.39 Aligned_cols=96 Identities=24% Similarity=0.221 Sum_probs=71.2
Q ss_pred hHhhHHHHHhhcCCCC-CCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCCch
Q 047433 59 LALSGLWNIAMTQPDD-PLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIP 137 (614)
Q Consensus 59 ~~~~~~~~~~~~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 137 (614)
-++..|+|++...|+. ..+.+.|++..+..+ +++.+.-+=..|+.+|+..+....+..+..+++|+||
T Consensus 73 ~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~l-----------L~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~ 141 (210)
T 4db6_A 73 EALWALSNIASGGNEQIQAVIDAGALPALVQL-----------LSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALP 141 (210)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHH-----------TTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHH-----------HcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHH
Confidence 4677777777543321 122334444444444 4455677788999999999998888888889999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhhhhhcc
Q 047433 138 PLMELLRGKISWVEQRVAVRALGHLASYD 166 (614)
Q Consensus 138 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 166 (614)
+|+++|+.. +.--|+.|+.||+.|+++.
T Consensus 142 ~L~~ll~~~-~~~v~~~a~~aL~~l~~~~ 169 (210)
T 4db6_A 142 ALVQLLSSP-NEQILQEALWALSNIASGG 169 (210)
T ss_dssp HHHHHTTCS-CHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHcCC-CHHHHHHHHHHHHHHHcCC
Confidence 999999976 5566899999999999873
No 231
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=94.43 E-value=0.026 Score=53.41 Aligned_cols=101 Identities=20% Similarity=0.131 Sum_probs=79.4
Q ss_pred chhHhhHHHHHhhcCCCC-CCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCC
Q 047433 57 HVLALSGLWNIAMTQPDD-PLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGV 135 (614)
Q Consensus 57 ~~~~~~~~~~~~~~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~ 135 (614)
..-++..|+|++...|+. ..+.+-|++..+..++. +.+--+=..|+.+++..+....+.....++.|+
T Consensus 145 ~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~-----------~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~ 213 (252)
T 4hxt_A 145 QKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLT-----------STDSEVQKEAARALANIASGPTSAIKAIVDAGG 213 (252)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT-----------CSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHC-----------CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCC
Confidence 335888899998765544 35566778777777654 334566788999999999988889999999999
Q ss_pred chHHHHHhcccchhhHHHHHHHHhhhhhhcccch
Q 047433 136 IPPLMELLRGKISWVEQRVAVRALGHLASYDRTF 169 (614)
Q Consensus 136 ~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f 169 (614)
||+|+++|...= .--|+.|+++|+.|+.+...+
T Consensus 214 i~~L~~ll~~~~-~~v~~~a~~~L~~l~~~~~~~ 246 (252)
T 4hxt_A 214 VEVLQKLLTSTD-SEVQKEAQRALENIKSGGWLE 246 (252)
T ss_dssp HHHHHHGGGCSC-HHHHHHHHHHHHHHHHTCBCC
T ss_pred HHHHHHHHCCCc-HHHHHHHHHHHHHHHcCCCcc
Confidence 999999998764 455899999999999877544
No 232
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=94.35 E-value=0.12 Score=57.50 Aligned_cols=95 Identities=20% Similarity=0.157 Sum_probs=69.8
Q ss_pred hHhhHHHHHhhcCCCCCCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCCchH
Q 047433 59 LALSGLWNIAMTQPDDPLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIPP 138 (614)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~ 138 (614)
.++..|+|++-..|+ .+... |++.....|+ ++.+.-+=..|+.+++..+.+..+..+..++.|+||+
T Consensus 243 ~a~~~L~nL~~~~~~-~~~~~-~~i~~Lv~lL-----------~~~d~~v~~~a~~aL~~L~~~~~~~~~~v~~~g~v~~ 309 (644)
T 2z6h_A 243 NCLWTLRNLSDAATK-QEGME-GLLGTLVQLL-----------GSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEA 309 (644)
T ss_dssp HHHHHHHHHGGGCTT-CCSCH-HHHHHHHHHT-----------TCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHhhcchh-hhhhh-hHHHHHHHHH-----------cCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHH
Confidence 477788888866544 33322 4444444443 3345566778999999999888888888999999999
Q ss_pred HHHHhcccch-hhHHHHHHHHhhhhhhcc
Q 047433 139 LMELLRGKIS-WVEQRVAVRALGHLASYD 166 (614)
Q Consensus 139 l~~~~~~~~~-wve~r~~~r~l~h~a~~~ 166 (614)
|+++|.-.=+ +--+..|++||++|++..
T Consensus 310 Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~ 338 (644)
T 2z6h_A 310 LVRTVLRAGDREDITEPAICALRHLTSRH 338 (644)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHccCCcHHHHHHHHHHHHHHhcCC
Confidence 9999985432 566788999999998754
No 233
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=94.31 E-value=0.18 Score=52.24 Aligned_cols=53 Identities=15% Similarity=-0.011 Sum_probs=47.7
Q ss_pred CcHHHHHHHHHHHhcCCCCCccHH--HHHHHHHHHHHc-----CCHHHHHHHHHHHHHcCCCC
Q 047433 477 EPDAAISDATRALCLSNPPNSHCK--SLWRRSQAYDMK-----GLGRESLMDCIMFINGCIRS 532 (614)
Q Consensus 477 dyeeAI~D~~~ALeLdP~~~~~~K--AyyRRA~Al~~L-----G~yeEAL~df~kALkl~P~~ 532 (614)
....|.....+|+++||+ +.. +|.-+|..|..+ |+.+.|...|+++++++|+.
T Consensus 178 ~l~~A~a~lerAleLDP~---~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPS---YQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHHHHHCTT---HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT
T ss_pred hHHHHHHHHHHHHHhCCC---cccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC
Confidence 457899999999999999 655 999999999996 99999999999999999953
No 234
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=94.19 E-value=0.025 Score=58.09 Aligned_cols=95 Identities=17% Similarity=0.152 Sum_probs=69.3
Q ss_pred hHhhHHHHHhhcCCCCC-CCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCCch
Q 047433 59 LALSGLWNIAMTQPDDP-LFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIP 137 (614)
Q Consensus 59 ~~~~~~~~~~~~~p~~~-~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 137 (614)
-++..|.|++-.+|+-+ .|..-|.+.-...|+.. .+.-+=--|+-.|+..+-...+..+..|++|+||
T Consensus 144 ~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~-----------~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~ 212 (296)
T 1xqr_A 144 KALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQ-----------QVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQ 212 (296)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHS-----------SCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHH
T ss_pred HHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHH
Confidence 35666666666555433 46677888777777653 2333445577777777666677888889999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhhhhhc
Q 047433 138 PLMELLRGKISWVEQRVAVRALGHLASY 165 (614)
Q Consensus 138 ~l~~~~~~~~~wve~r~~~r~l~h~a~~ 165 (614)
+|++||+.. .--=|..|++||+.|++.
T Consensus 213 ~Lv~LL~~~-d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 213 QLVALVRTE-HSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHHHTSC-CSTHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCC-ChhHHHHHHHHHHHHHhC
Confidence 999999976 445578999999999987
No 235
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=94.04 E-value=0.18 Score=46.00 Aligned_cols=76 Identities=13% Similarity=-0.073 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHcCCHHH---HHHHHHHHHhhC-CCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHH
Q 047433 425 LIKQEAKHLFWLGEIEE---AAMKYTEALGVC-PSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCK 500 (614)
Q Consensus 425 ~lK~~GN~lFk~Gdyee---AI~~YtkAIel~-P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~K 500 (614)
...+.|-.+.+..+-.. +|..++..+... | ...-.+++.+|..++++|+|.+|...++..|+++|. |..
T Consensus 37 ~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p----~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~---n~Q 109 (126)
T 1nzn_A 37 TQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK----EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQ---NNQ 109 (126)
T ss_dssp HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCH----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCc----chHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCC---CHH
Confidence 45556666777666555 999999888865 3 234789999999999999999999999999999999 877
Q ss_pred HHHHHHH
Q 047433 501 SLWRRSQ 507 (614)
Q Consensus 501 AyyRRA~ 507 (614)
|.--+..
T Consensus 110 A~~Lk~~ 116 (126)
T 1nzn_A 110 AKELERL 116 (126)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6554433
No 236
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=93.98 E-value=0.066 Score=58.21 Aligned_cols=116 Identities=18% Similarity=0.268 Sum_probs=84.7
Q ss_pred HHHHhhhCCCCCcccchhHhhHHHHHhhcCCCCC--CCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhcc
Q 047433 42 VASFFKEMPLQDDQQHVLALSGLWNIAMTQPDDP--LFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSY 119 (614)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy 119 (614)
|...-+.+-..|.+.+.-++..+.++--..++.| ++.+.|++.-...|+. ++.|--|-+.||.+++..
T Consensus 78 l~~lv~~l~s~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~----------~~~~~~~q~~Aa~aL~ni 147 (529)
T 3tpo_A 78 VEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLG----------KTDCSPIQFESAWALTNI 147 (529)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHT----------CTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHHc----------CCCCHHHHHHHHHHHHHH
Confidence 4444555555555555557777777654444444 5667777766555543 456677888999999999
Q ss_pred ccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhcccc
Q 047433 120 TMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASYDRT 168 (614)
Q Consensus 120 ~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~ 168 (614)
.....+....-|++|+||+|+.||...-.=| |+.|+.|||.||.....
T Consensus 148 a~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v-~e~A~~aL~nLa~~~~~ 195 (529)
T 3tpo_A 148 ASGTSEQTKAVVDGGAIPAFISLLASPHAHI-SEQAVWALGNIAGAGSA 195 (529)
T ss_dssp HTSCHHHHHHHHHTTHHHHHHHHTTCSCHHH-HHHHHHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHHCCCHHHHHHHHcCCCHHH-HHHHHHHHHHHhccCHH
Confidence 9888999999999999999999998765543 67899999999987543
No 237
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=93.91 E-value=0.15 Score=48.71 Aligned_cols=84 Identities=21% Similarity=0.158 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC---CCC-----------------cchhHHHHHHHHHHHHHcCCcHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCP---SRP-----------------KNERMVLYSNRAQCHLLLREPDAA 481 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P---~~~-----------------~~~~a~lysNRA~~ylkLGdyeeA 481 (614)
.++.+.-.|+.+|..|+|..|...|.+||.+.- ... ...-.++.+..|.||++++++++|
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 566888999999999999999999999987532 110 001136888999999999999999
Q ss_pred HHHHHHHHhcCCCCCccHHHHHHHHHHH
Q 047433 482 ISDATRALCLSNPPNSHCKSLWRRSQAY 509 (614)
Q Consensus 482 I~D~~~ALeLdP~~~~~~KAyyRRA~Al 509 (614)
|...+.. |...+.++.-.-+|..|
T Consensus 142 i~~Le~I----p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 142 IAILDGI----PSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHTS----CGGGCCHHHHHHHHHHC
T ss_pred HHHHhcC----CchhcCHHHHHHHHHHh
Confidence 9975443 33233456555555544
No 238
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=93.84 E-value=0.061 Score=58.61 Aligned_cols=96 Identities=16% Similarity=0.108 Sum_probs=64.3
Q ss_pred HhhHHHHHhhcCCCCCCCc--cccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccc-hHHHHHHHHhcCCc
Q 047433 60 ALSGLWNIAMTQPDDPLFP--ALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMN-KVEFAEKAVKSGVI 136 (614)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~--~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~-~~~~~~~av~~~~~ 136 (614)
+...|+|++...++.+.+. .-|++.-... |++..+.-+-..|+-.++.-+.+ ..+.-..-+++|+|
T Consensus 220 Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~-----------LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI 288 (458)
T 3nmz_A 220 AGMALTNLTFGDVANKATLCSMKGCMRALVA-----------QLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSV 288 (458)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHCHHHHHHHHH-----------GGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHH
T ss_pred HHHHHHHHhCCCcccHHHHHHcCCcHHHHHH-----------HHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCH
Confidence 5666778776554333332 2243444333 44455666777888888887775 34555566789999
Q ss_pred hHHHHHhcccchhhHHHHHHHHhhhhhhcc
Q 047433 137 PPLMELLRGKISWVEQRVAVRALGHLASYD 166 (614)
Q Consensus 137 ~~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 166 (614)
|||+++|...-+.--++.|++||+.|+++.
T Consensus 289 ~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~ 318 (458)
T 3nmz_A 289 KALMECALEVKKESTLKSVLSALWNLSAHC 318 (458)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHccCC
Confidence 999998644336667889999999999943
No 239
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=93.74 E-value=0.11 Score=55.78 Aligned_cols=111 Identities=15% Similarity=0.101 Sum_probs=81.3
Q ss_pred CCcccchhHhhHHHHHhhcCCCCC-CCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHH
Q 047433 52 QDDQQHVLALSGLWNIAMTQPDDP-LFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKA 130 (614)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~p~~~-~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~a 130 (614)
.|++-+.-+...|.|++...|+.- .+...|.+.-+..|+. ..|.-+-..|+..++.-+....+.-..-
T Consensus 14 ~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~-----------s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 14 QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-----------SPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp SCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTT-----------SSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHc-----------CCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 344446668888888875444322 6778888888877764 2344566789998888877767777778
Q ss_pred HhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhcccchhHHh
Q 047433 131 VKSGVIPPLMELLRGKISWVEQRVAVRALGHLASYDRTFDSVA 173 (614)
Q Consensus 131 v~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~ 173 (614)
|++|+||+|++||+..-+---|+-|+.||+.|++++.+=..|.
T Consensus 83 ~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~ 125 (457)
T 1xm9_A 83 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELI 125 (457)
T ss_dssp HHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHH
T ss_pred HHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHH
Confidence 8999999999999833344557889999999999966544455
No 240
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=93.65 E-value=0.29 Score=55.85 Aligned_cols=81 Identities=11% Similarity=-0.021 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHH-HHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHH
Q 047433 440 EEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAI-SDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRES 518 (614)
Q Consensus 440 eeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI-~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEA 518 (614)
+.....|.++|..+|.+ ..+|...|.-+...|+.++|+ ..+.+|+...|. +...++..+......|++++|
T Consensus 326 ~Rv~~~Ye~aL~~~p~~-----~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~---s~~Lwl~~a~~ee~~~~~e~a 397 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFA-----PEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPN---SAVLAFSLSEQYELNTKIPEI 397 (679)
T ss_dssp HHHHHHHHHHHHHTTTC-----HHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCC-----HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHhCCHHHH
Confidence 45678899999999999 999999999999999999998 999999999999 888899999999999999999
Q ss_pred HHHHHHHHHc
Q 047433 519 LMDCIMFING 528 (614)
Q Consensus 519 L~df~kALkl 528 (614)
...|+++++.
T Consensus 398 R~iyek~l~~ 407 (679)
T 4e6h_A 398 ETTILSCIDR 407 (679)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999985
No 241
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=93.38 E-value=0.36 Score=55.43 Aligned_cols=94 Identities=20% Similarity=0.201 Sum_probs=66.5
Q ss_pred HhhHHHHHhhcCCCCCCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCCchHH
Q 047433 60 ALSGLWNIAMTQPDDPLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIPPL 139 (614)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l 139 (614)
++..|.|++-..++..-+ -|++.....| +++ .+.-+=..|+.+++..+.+..+.....++.|+||+|
T Consensus 380 a~~~L~~L~~~~~~~~~~--~~~i~~Lv~l----L~~-------~d~~vr~~A~~aL~~L~~~~~~~~~~i~~~g~i~~L 446 (780)
T 2z6g_A 380 CLWTLRNLSDAATKQEGM--EGLLGTLVQL----LGS-------DDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEAL 446 (780)
T ss_dssp HHHHHHHHHTTCTTCSCC--HHHHHHHHHH----TTC-------SCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTHHHHH
T ss_pred HHHHHHHHhccchhhhhh--hhHHHHHHHH----HcC-------CCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHH
Confidence 566677777665542211 2334333333 333 344455789999999999988888889999999999
Q ss_pred HHHhcccchh-hHHHHHHHHhhhhhhcc
Q 047433 140 MELLRGKISW-VEQRVAVRALGHLASYD 166 (614)
Q Consensus 140 ~~~~~~~~~w-ve~r~~~r~l~h~a~~~ 166 (614)
+++|.-.-++ --++.|+|+||+|++..
T Consensus 447 v~lL~~~~~~~~v~~~Al~aL~nL~~~~ 474 (780)
T 2z6g_A 447 VRTVLRAGDREDITEPAICALRHLTSRH 474 (780)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTSSS
T ss_pred HHHHHccCCHHHHHHHHHHHHHHHHhcC
Confidence 9999865455 56788999999998643
No 242
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=93.33 E-value=0.2 Score=46.16 Aligned_cols=77 Identities=13% Similarity=-0.148 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 425 LIKQEAKHLFWLGE---IEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 425 ~lK~~GN~lFk~Gd---yeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
...+-+-.+.+..+ ...+|..++..+...|.. .-.+++.+|..++++|+|.+|.+.++..|+++|+ |..|
T Consensus 42 t~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~----~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~---N~QA 114 (134)
T 3o48_A 42 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR----RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN---NKQV 114 (134)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG----HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTT---CHHH
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcch----hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCC---CHHH
Confidence 34445555555554 467999999999877632 4789999999999999999999999999999999 8766
Q ss_pred HHHHHHH
Q 047433 502 LWRRSQA 508 (614)
Q Consensus 502 yyRRA~A 508 (614)
.--+..+
T Consensus 115 ~~Lk~~I 121 (134)
T 3o48_A 115 GALKSMV 121 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5544333
No 243
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=93.29 E-value=0.056 Score=53.82 Aligned_cols=105 Identities=11% Similarity=0.063 Sum_probs=78.5
Q ss_pred chhHhhHHHHHhhcCC-CCCCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCC
Q 047433 57 HVLALSGLWNIAMTQP-DDPLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGV 135 (614)
Q Consensus 57 ~~~~~~~~~~~~~~~p-~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~ 135 (614)
+.-+..-|.|++...| +.-.+.+.|.+.-.-.|+. ..+.-+=..|+..++.-+....+.-..-+++|.
T Consensus 27 q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~-----------s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~Ga 95 (233)
T 3tt9_A 27 ISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLK-----------VQNEDVQRAVCGALRNLVFEDNDNKLEVAELNG 95 (233)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGG-----------CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCC
Confidence 3356677888886544 4446777888776666653 335567788999999988876677777779999
Q ss_pred chHHHHHhcccchhhHHHHHHHHhhhhhhcccchhHH
Q 047433 136 IPPLMELLRGKISWVEQRVAVRALGHLASYDRTFDSV 172 (614)
Q Consensus 136 ~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~ 172 (614)
||||+.||+..=++--|+-|+.||.+|++++..=+.|
T Consensus 96 I~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~i 132 (233)
T 3tt9_A 96 VPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLM 132 (233)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHH
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHcChhhHHHH
Confidence 9999999984336778999999999999987654433
No 244
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=92.78 E-value=0.18 Score=58.31 Aligned_cols=60 Identities=12% Similarity=0.003 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 047433 463 VLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMF 525 (614)
Q Consensus 463 ~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kA 525 (614)
.++.--|.-++..|+|+-|+..+++|+.+-|. ..+.|++++.+|..+|+|+.|+-.+..+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPs---eF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALD---SFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS---CHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCch---hhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 35555677778899999999999999999999 9999999999999999999999876665
No 245
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=92.73 E-value=0.43 Score=44.43 Aligned_cols=74 Identities=12% Similarity=-0.160 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHH
Q 047433 425 LIKQEAKHLFWLGE---IEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKS 501 (614)
Q Consensus 425 ~lK~~GN~lFk~Gd---yeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KA 501 (614)
...+-+-.+.+..+ ...+|..++..+...|.. .-.+++.+|..++++|+|.+|...++..|+++|+ |..|
T Consensus 41 t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~----~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~---n~QA 113 (144)
T 1y8m_A 41 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR----RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN---NKQV 113 (144)
T ss_dssp HHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCST----HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCC---CHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccc----hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC---cHHH
Confidence 44455566666654 457999999999977753 3678999999999999999999999999999999 7766
Q ss_pred HHHH
Q 047433 502 LWRR 505 (614)
Q Consensus 502 yyRR 505 (614)
.--+
T Consensus 114 ~~Lk 117 (144)
T 1y8m_A 114 GALK 117 (144)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5433
No 246
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=92.38 E-value=0.1 Score=58.66 Aligned_cols=122 Identities=13% Similarity=0.073 Sum_probs=83.7
Q ss_pred hHHHHhhhCCCCCcccchhHhhHHHHHhhcC-CCCCCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhcc
Q 047433 41 GVASFFKEMPLQDDQQHVLALSGLWNIAMTQ-PDDPLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSY 119 (614)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy 119 (614)
.|..+-+-|-..|++-+.-+...|.|++... ++--.+.+.|.+.-+..|+. ..|.-+=..|+-.++.-
T Consensus 49 ~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~-----------s~~~~vq~~Aa~AL~nL 117 (584)
T 3l6x_A 49 ELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLD-----------HPKKEVHLGACGALKNI 117 (584)
T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGG-----------CSSHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHC-----------CCCHHHHHHHHHHHHHH
Confidence 3444444443333333444666777777532 22234566777766666654 34566778999999998
Q ss_pred ccc-hHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhcccchhHHh
Q 047433 120 TMN-KVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASYDRTFDSVA 173 (614)
Q Consensus 120 ~~~-~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~ 173 (614)
+.. ..+.-..-+++|+||||++||+.--+..-|+.|+.||.+|++++..=..|.
T Consensus 118 a~~~~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~ 172 (584)
T 3l6x_A 118 SFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIV 172 (584)
T ss_dssp TSSSCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHH
T ss_pred HccCCHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHH
Confidence 885 477777788999999999999954444458999999999999876655555
No 247
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=91.84 E-value=0.31 Score=52.40 Aligned_cols=96 Identities=20% Similarity=0.161 Sum_probs=72.7
Q ss_pred hHhhHHHHHhhcC-CCCCCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCCch
Q 047433 59 LALSGLWNIAMTQ-PDDPLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIP 137 (614)
Q Consensus 59 ~~~~~~~~~~~~~-p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 137 (614)
-++..|+|++... |.-+....-|++..+..|+. +.+.-|=..|+.+|+..+-...+..+..++.|+||
T Consensus 234 ~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~-----------~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~ 302 (530)
T 1wa5_B 234 TATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIY-----------SMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPK 302 (530)
T ss_dssp HHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTT-----------CCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHH
Confidence 4778888888765 44443334466666655542 34455677899999999888777778888999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhhhhhcc
Q 047433 138 PLMELLRGKISWVEQRVAVRALGHLASYD 166 (614)
Q Consensus 138 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 166 (614)
.|+++|... +|--+..|+++||++++..
T Consensus 303 ~Lv~lL~~~-~~~v~~~a~~~L~~l~~~~ 330 (530)
T 1wa5_B 303 RLVELLSHE-STLVQTPALRAVGNIVTGN 330 (530)
T ss_dssp HHHHGGGCS-CHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHCCC-ChhhHHHHHHHHHHHHcCC
Confidence 999999854 6777889999999999764
No 248
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=91.68 E-value=0.15 Score=54.58 Aligned_cols=118 Identities=15% Similarity=0.203 Sum_probs=83.6
Q ss_pred hhhHHHHhhhCCCCCcccchhHhhHHHHHhhcCCCCC--CCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhh
Q 047433 39 RAGVASFFKEMPLQDDQQHVLALSGLWNIAMTQPDDP--LFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVI 116 (614)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~ 116 (614)
...|....+-|-..|.+.+..++..|-+++-..+++| ++..-|++.-+..++..+ .+.-|=..|+.++
T Consensus 73 ~~~l~~lv~~L~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~----------~~~~v~~~A~~~L 142 (528)
T 4b8j_A 73 LESLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTRE----------DFPQLQFEAAWAL 142 (528)
T ss_dssp --CHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCT----------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCC----------CCHHHHHHHHHHH
Confidence 3456677777744444434556677777765554333 345557766666655322 2356677899999
Q ss_pred hccccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhccc
Q 047433 117 GSYTMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASYDR 167 (614)
Q Consensus 117 gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~ 167 (614)
|...-...++....+++|+||+|+.+|... +.--++.|++|||.|+....
T Consensus 143 ~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~-~~~v~~~a~~aL~~l~~~~~ 192 (528)
T 4b8j_A 143 TNIASGTSENTKVVIDHGAVPIFVKLLGSS-SDDVREQAVWALGNVAGDSP 192 (528)
T ss_dssp HHHHTSCHHHHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHHHTCH
T ss_pred HHHhCCCHHHHHHHHhCCcHHHHHHHhcCC-CHHHHHHHHHHHHHHhCCCh
Confidence 999988889999999999999999999875 56678899999999987543
No 249
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=91.30 E-value=0.26 Score=53.44 Aligned_cols=117 Identities=19% Similarity=0.250 Sum_probs=82.0
Q ss_pred HHHHhhhCCCCCcccchhHhhHHHHHhhcCCCCC--CCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhcc
Q 047433 42 VASFFKEMPLQDDQQHVLALSGLWNIAMTQPDDP--LFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSY 119 (614)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy 119 (614)
|...-+.+-..|.+.+.-++..+.++--..++-| +...-|++--.-.|+ .+..|.-|=+.||-+++..
T Consensus 59 i~~~v~~l~s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL----------~~~~~~~lq~~Aa~aL~ni 128 (510)
T 3ul1_B 59 VEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFL----------GKTDCSPIQFESAWALTNI 128 (510)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHT----------TCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHH----------CCCCCHHHHHHHHHHHHHH
Confidence 4444455544555545567777777754444433 455666655444443 3455666778999999988
Q ss_pred ccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhcccch
Q 047433 120 TMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASYDRTF 169 (614)
Q Consensus 120 ~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f 169 (614)
.-...+....-|++|+||+|+++|+..=. --|+.|+.|||.||.....+
T Consensus 129 as~~~e~~~~vv~~GaIp~Lv~lL~s~~~-~v~e~A~~aL~nLa~d~~~~ 177 (510)
T 3ul1_B 129 ASGTSEQTKAVVDGGAIPAFISLLASPHA-HISEQAVWALGNIAGDGSAF 177 (510)
T ss_dssp HTSCHHHHHHHHHTTHHHHHHHHTTCSCH-HHHHHHHHHHHHHHTTCHHH
T ss_pred hcCCHHHHHHHHHCCCHHHHHHHHcCCCH-HHHHHHHHHHHHHHhCCHHH
Confidence 77778888888999999999999987544 44788999999999875544
No 250
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=91.28 E-value=1.5 Score=47.72 Aligned_cols=125 Identities=18% Similarity=0.192 Sum_probs=79.5
Q ss_pred HhhHHHHHhhcCCCCCCC-ccccHHHHHHHHHHhhcCCccccccC------Ccccchh-------hhhhhhhccccchHH
Q 047433 60 ALSGLWNIAMTQPDDPLF-PALGIFNCMSSLISKGVNNRDWLLRD------QNIYIPY-------YAAHVIGSYTMNKVE 125 (614)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~-~~lg~~~~~~~l~~~~~~~~~~~~~~------~~~~~~y-------y~ah~~gsy~~~~~~ 125 (614)
+.-.|=|||-.+||+-+. -+.|+..++..+..--..=..|+... |.=.+|- .|+..||-..-+ ++
T Consensus 102 a~~al~ni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qAv~aL~nls~~-~e 180 (458)
T 3nmz_A 102 ASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFD-EE 180 (458)
T ss_dssp HHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCSCC--CCCTTTTHHHHHHHHHHTTS-HH
T ss_pred HHHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhhHHHHHHHHhhccccccccCCccchhhHHHHHHHHHHHHhcCC-HH
Confidence 555666999999998766 35567766665533332235677543 2223544 788888866665 66
Q ss_pred HHHHHHhcCCchHHHHHhcc---------cchhhH-HHHHHHHhhhhhhcccchh-HHhhhHHHHHHHHHHH
Q 047433 126 FAEKAVKSGVIPPLMELLRG---------KISWVE-QRVAVRALGHLASYDRTFD-SVAVYEEEVVKLAMQL 186 (614)
Q Consensus 126 ~~~~av~~~~~~~l~~~~~~---------~~~wve-~r~~~r~l~h~a~~~~~f~-~~~~~~~~~~~~~~~~ 186 (614)
+=..-++.|+||||+.||.- .....+ ||-|+.+|.+|+..+..-. .|...+ .+|+.-+++
T Consensus 181 ~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~-GaIp~LV~L 251 (458)
T 3nmz_A 181 HRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMK-GCMRALVAQ 251 (458)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCH-HHHHHHHHG
T ss_pred HHHHHHHCCCHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcC-CcHHHHHHH
Confidence 76667789999999999941 112333 8999999999998775332 333333 444444443
No 251
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=91.08 E-value=0.52 Score=48.52 Aligned_cols=97 Identities=20% Similarity=0.188 Sum_probs=72.7
Q ss_pred hHhhHHHHHhhcC-CCCCCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCCch
Q 047433 59 LALSGLWNIAMTQ-PDDPLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIP 137 (614)
Q Consensus 59 ~~~~~~~~~~~~~-p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 137 (614)
.++..|+|++... |.-.....-|++..+..++. +.+.-+=..|+..++..+-...+.....++.|+||
T Consensus 169 ~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~-----------~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~ 237 (450)
T 2jdq_A 169 NAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLF-----------VSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCR 237 (450)
T ss_dssp HHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTT-----------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHH
T ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHc-----------cCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHH
Confidence 5788889988765 44332223566776666653 23445567888999998888777788888999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhhhhhccc
Q 047433 138 PLMELLRGKISWVEQRVAVRALGHLASYDR 167 (614)
Q Consensus 138 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~~ 167 (614)
+|+++|.. -.|--+..|+++||.+++...
T Consensus 238 ~L~~ll~~-~~~~v~~~a~~~L~~l~~~~~ 266 (450)
T 2jdq_A 238 RLVELLMH-NDYKVVSPALRAVGNIVTGDD 266 (450)
T ss_dssp HHHHHTTC-SCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHHCC-CchhHHHHHHHHHHHHhhCCh
Confidence 99999984 467778899999999998653
No 252
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.38 E-value=1.1 Score=47.73 Aligned_cols=104 Identities=6% Similarity=-0.099 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC-CccH--HH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP-NSHC--KS 501 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~-~~~~--KA 501 (614)
.+...|.-+++.|++++|+..|.+....+... .....++.+...+++..++|..+....+++-.+-... .+.. +.
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~--~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~l 210 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAIST--GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRY 210 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCC--CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCh--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHH
Confidence 56789999999999999999999999988753 5567889999999999999999999999987653221 1233 33
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
....|..+...++|.+|-..|..++....
T Consensus 211 k~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 211 KTYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 44557777888999999999999887643
No 253
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=89.71 E-value=0.27 Score=52.94 Aligned_cols=118 Identities=16% Similarity=0.203 Sum_probs=77.9
Q ss_pred hhhhHHHHhhhCCCCCcccchhHhhHHHHHhhcCCCCCC---CccccHHHHHHHHHHhhcCCccccccCCcccchhhhhh
Q 047433 38 RRAGVASFFKEMPLQDDQQHVLALSGLWNIAMTQPDDPL---FPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAH 114 (614)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah 114 (614)
.+..|..+++.|-..|.+.+..++..|-+++-. .++|. +..-|++.-+..++ .+ +.+.-|=+.|+.
T Consensus 85 ~~~~i~~lv~~L~s~~~~~~~~A~~~L~~ll~~-~~~~~~~~~~~~g~i~~Lv~~L----~~------~~~~~v~~~A~~ 153 (530)
T 1wa5_B 85 LQQELPQMTQQLNSDDMQEQLSATVKFRQILSR-EHRPPIDVVIQAGVVPRLVEFM----RE------NQPEMLQLEAAW 153 (530)
T ss_dssp --CCHHHHHHHHSCSSHHHHHHHHHHHHHHTCC-SSSCSHHHHHHTTCHHHHHHTT----ST------TSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCC-CCCccHHHHHHCCCHHHHHHHh----CC------CCCHHHHHHHHH
Confidence 345577777777554433344455555555443 23332 33345444333322 22 126667789999
Q ss_pred hhhccccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhccc
Q 047433 115 VIGSYTMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASYDR 167 (614)
Q Consensus 115 ~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~ 167 (614)
++|...-...++...-+..|+||+|+++|+.. +.--++.|+++|++|++...
T Consensus 154 ~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~-~~~vr~~A~~aL~~l~~~~~ 205 (530)
T 1wa5_B 154 ALTNIASGTSAQTKVVVDADAVPLFIQLLYTG-SVEVKEQAIWALGNVAGDST 205 (530)
T ss_dssp HHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCC-CHHHHHHHHHHHHHHhCCCc
Confidence 99998887788888888999999999999854 55568889999999998643
No 254
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=89.50 E-value=0.08 Score=54.27 Aligned_cols=123 Identities=20% Similarity=0.200 Sum_probs=80.8
Q ss_pred CCchhhhhhHHHHhhh-CCCC--------CcccchhHhhHHHHHhhcCCCCCCCccccHHHHHHHHHHhhcCCccccccC
Q 047433 33 PNSSLRRAGVASFFKE-MPLQ--------DDQQHVLALSGLWNIAMTQPDDPLFPALGIFNCMSSLISKGVNNRDWLLRD 103 (614)
Q Consensus 33 ~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~p~~~~~~~lg~~~~~~~l~~~~~~~~~~~~~~ 103 (614)
+|+..|...+-..++. .|.. +.++.+.++.-|-+..-..++=-.|..+|.+. .|+. -|++.
T Consensus 24 ~d~~~~mk~~l~vl~~~~~~~~~~~~~~~~~e~k~~Al~~L~~lv~~~dna~~~~~~G~l~---~Lv~-------~lL~s 93 (296)
T 1xqr_A 24 RGEVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSGMH---LLVG-------RYLEA 93 (296)
T ss_dssp HHHHHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHH---HHHH-------TTTTC
T ss_pred CCHHHHHHHHHHHHhCCCcccccccccCCCHHHHHHHHHHHHHHHhChhhHHHHHHcCCHH---HHHH-------HHHcC
Confidence 4566666666666664 3432 11223344444444433222222477788875 3443 24445
Q ss_pred CcccchhhhhhhhhccccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhc
Q 047433 104 QNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASY 165 (614)
Q Consensus 104 ~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~ 165 (614)
.+--|=-+|+-+||.-.-+..+.....|+.|+||||+.||+---+=--+|-|+.||+-|+..
T Consensus 94 ~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~ 155 (296)
T 1xqr_A 94 GAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVRE 155 (296)
T ss_dssp SSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcC
Confidence 66777789999999999899999999999999999999998321112378899999998753
No 255
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=89.47 E-value=0.29 Score=50.42 Aligned_cols=67 Identities=21% Similarity=0.282 Sum_probs=58.1
Q ss_pred cccCCcccchhhhhhhhhccccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhcc
Q 047433 100 LLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASYD 166 (614)
Q Consensus 100 ~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~ 166 (614)
++++.+.-|-..|+.++|...-...++....++.|+||+|+.+|...-++--++.|+++|++|+.+.
T Consensus 115 lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~ 181 (450)
T 2jdq_A 115 LLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGK 181 (450)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCS
T ss_pred HHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4455677788899999999988888888888999999999999997677888999999999999765
No 256
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=89.46 E-value=0.95 Score=47.74 Aligned_cols=106 Identities=13% Similarity=0.094 Sum_probs=75.0
Q ss_pred hHhhHHHHHhhcCCCC-CCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccch---HHHHHHHHhcC
Q 047433 59 LALSGLWNIAMTQPDD-PLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNK---VEFAEKAVKSG 134 (614)
Q Consensus 59 ~~~~~~~~~~~~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~---~~~~~~av~~~ 134 (614)
-+...|+|++...|+. ..+.+.|++..+..++... +.+--+-..|+.++|.-+.+. +......+..|
T Consensus 285 ~a~~~L~~L~~~~~~~~~~~~~~~~v~~L~~ll~~~---------~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~ 355 (529)
T 1jdh_A 285 CAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA---------GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHY 355 (529)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHH---------TTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHcCChHHHHHHHHcc---------CCHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHcC
Confidence 4777888887653311 1234457777777776542 122345577899999887752 33555677899
Q ss_pred CchHHHHHhcccchhhHHHHHHHHhhhhhhcccchhHHh
Q 047433 135 VIPPLMELLRGKISWVEQRVAVRALGHLASYDRTFDSVA 173 (614)
Q Consensus 135 ~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~ 173 (614)
+||+|+.+|+..-+|--++.|+.+|+.++.....-..+.
T Consensus 356 ~i~~L~~lL~~~~~~~v~~~a~~~l~nl~~~~~~~~~~~ 394 (529)
T 1jdh_A 356 GLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLR 394 (529)
T ss_dssp CHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHH
T ss_pred ChhHHHHHhccccchHHHHHHHHHHHHHhcChhhhHHHH
Confidence 999999999988789999999999999998766544443
No 257
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=88.31 E-value=4.2 Score=41.51 Aligned_cols=60 Identities=17% Similarity=0.098 Sum_probs=56.4
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCC
Q 047433 430 AKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNP 494 (614)
Q Consensus 430 GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~ 494 (614)
.+.+++.|+.++|++.....|+.+|.+ +.+..-+-+.+.-.|+|+.|...++.+.+++|.
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~d-----a~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~ 63 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKD-----ASLRSSFIELLCIDGDFERADEQLMQSIKLFPE 63 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGG
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcC-----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCch
Confidence 356789999999999999999999999 998888899999999999999999999999998
No 258
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=88.07 E-value=4.4 Score=38.28 Aligned_cols=87 Identities=14% Similarity=-0.025 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHhhCCCCCc---chhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHH
Q 047433 440 EEAAMKYTEALGVCPSRPK---NERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGR 516 (614)
Q Consensus 440 eeAI~~YtkAIel~P~~~~---~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~ye 516 (614)
+.-++.|++|+..-|.... +-..-+|.+-| .+..++|.++|-..|+.++.+... ..|.|.-.|+--...|+..
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA-~~~ei~D~d~aR~vy~~a~~~hKk---FAKiwi~~AqFEiRqgnl~ 111 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFA-ELKAIQEPDDARDYFQMARANCKK---FAFVHISFAQFELSQGNVK 111 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHH-HHHHHHCGGGCHHHHHHHHHHCTT---BHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHhHH---HHHHHHHHHHHHHHcccHH
Confidence 6777899999998876311 22345666666 446789999999999999999767 8999999999999999999
Q ss_pred HHHHHHHHHHHcCC
Q 047433 517 ESLMDCIMFINGCI 530 (614)
Q Consensus 517 EAL~df~kALkl~P 530 (614)
.|.+-+.+++.++|
T Consensus 112 kARkILg~AiG~~~ 125 (161)
T 4h7y_A 112 KSKQLLQKAVERGA 125 (161)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCC
Confidence 99999999999988
No 259
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=87.55 E-value=0.66 Score=50.27 Aligned_cols=103 Identities=21% Similarity=0.188 Sum_probs=75.7
Q ss_pred hHhhHHHHHhhcCCCC-CCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCCch
Q 047433 59 LALSGLWNIAMTQPDD-PLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIP 137 (614)
Q Consensus 59 ~~~~~~~~~~~~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 137 (614)
-+...|||+|...|+. -.+.+-|++.....| +...+.-+=..|+..+|......+++....+++|+||
T Consensus 139 ~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~L-----------L~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~ 207 (529)
T 3tpo_A 139 ESAWALTNIASGTSEQTKAVVDGGAIPAFISL-----------LASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAID 207 (529)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHH-----------TTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHH-----------HcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcH
Confidence 3677788888654432 134455655554444 4556777778999999999999999999999999999
Q ss_pred HHHHHhcccc----hhhHHHHHHHHhhhhhhcccchhHH
Q 047433 138 PLMELLRGKI----SWVEQRVAVRALGHLASYDRTFDSV 172 (614)
Q Consensus 138 ~l~~~~~~~~----~wve~r~~~r~l~h~a~~~~~f~~~ 172 (614)
||+.+|...- +---+|.|+.+|..++......+.+
T Consensus 208 ~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~ 246 (529)
T 3tpo_A 208 PLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPL 246 (529)
T ss_dssp HHHHTTCSSCGGGSCHHHHHHHHHHHHHHHCCCTTCCCH
T ss_pred HHHHHHhccchhHhHHHHHHHHHHHHHHHHhcccchhhH
Confidence 9999998542 2234788999999998877655544
No 260
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=87.53 E-value=0.15 Score=53.55 Aligned_cols=97 Identities=14% Similarity=0.132 Sum_probs=67.1
Q ss_pred HhhHHHHHhh---cCCCC-CCCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCC
Q 047433 60 ALSGLWNIAM---TQPDD-PLFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGV 135 (614)
Q Consensus 60 ~~~~~~~~~~---~~p~~-~~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~ 135 (614)
+...|||++. ..|+. ..+.+-|++.....|+.. .+.-+=-.|+-+|+..+....+.....+++|+
T Consensus 238 A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~-----------~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~ 306 (354)
T 3nmw_A 238 GGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKS-----------HSLTIVSNACGTLWNLSARNPKDQEALWDMGA 306 (354)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTC-----------SCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTH
T ss_pred HHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcC-----------CChHHHHHHHHHHHHHhCCCHHHHHHHHHCCC
Confidence 4455666665 22221 123344555555555432 33346667888899888777788888899999
Q ss_pred chHHHHHhcccchhhHHHHHHHHhhhhhhcccc
Q 047433 136 IPPLMELLRGKISWVEQRVAVRALGHLASYDRT 168 (614)
Q Consensus 136 ~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~ 168 (614)
||||++||+.+-.-| ++.|+.||..|++....
T Consensus 307 i~~Lv~LL~s~~~~i-~~~A~~aL~nL~~~~~~ 338 (354)
T 3nmw_A 307 VSMLKNLIHSKHKMI-AMGSAAALRNLMANRPA 338 (354)
T ss_dssp HHHHHTTTTCSSHHH-HHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHhCCCHHH-HHHHHHHHHHHHcCCHH
Confidence 999999998875544 89999999999987554
No 261
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=86.78 E-value=1 Score=48.61 Aligned_cols=105 Identities=20% Similarity=0.190 Sum_probs=77.3
Q ss_pred hhHhhHHHHHhhcCCCCC-CCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCCc
Q 047433 58 VLALSGLWNIAMTQPDDP-LFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVI 136 (614)
Q Consensus 58 ~~~~~~~~~~~~~~p~~~-~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~ 136 (614)
.-+...|+|+|...|+.- .+.+.|++.....|+ +..+.-|=..|+-.+|....+.+++....++.|+|
T Consensus 119 ~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL-----------~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i 187 (510)
T 3ul1_B 119 FESAWALTNIASGTSEQTKAVVDGGAIPAFISLL-----------ASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAI 187 (510)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHT-----------TCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHH-----------cCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCh
Confidence 347888999986443221 234556655555543 45677788899999999999999999999999999
Q ss_pred hHHHHHhcccc----hhhHHHHHHHHhhhhhhcccchhHHh
Q 047433 137 PPLMELLRGKI----SWVEQRVAVRALGHLASYDRTFDSVA 173 (614)
Q Consensus 137 ~~l~~~~~~~~----~wve~r~~~r~l~h~a~~~~~f~~~~ 173 (614)
|||+.+|...- +---+|.|+.+|..++......+.+.
T Consensus 188 ~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~ 228 (510)
T 3ul1_B 188 DPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLD 228 (510)
T ss_dssp HHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHH
T ss_pred HHHHHHHHhccchhhhHHHHHHHHHHHHHHhhcccchhHHH
Confidence 99999998532 23347889999999988776655443
No 262
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=86.02 E-value=2.7 Score=48.98 Aligned_cols=132 Identities=17% Similarity=0.155 Sum_probs=81.8
Q ss_pred CCcccchhHhhHHHHHhhc---CCCCCCCccccH---HHHHHHHHHhhc--------------------CCcccccc---
Q 047433 52 QDDQQHVLALSGLWNIAMT---QPDDPLFPALGI---FNCMSSLISKGV--------------------NNRDWLLR--- 102 (614)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~---~p~~~~~~~lg~---~~~~~~l~~~~~--------------------~~~~~~~~--- 102 (614)
.++.-+..++++||+++-. .|..|.|-+-++ .....+|+..+- ..+..+..
T Consensus 342 ~~~~vr~~Al~~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~~~vk~~lv~d~g 421 (810)
T 3now_A 342 KNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDKA 421 (810)
T ss_dssp SCHHHHHHHHHHHHHHHTTTTTTTSCCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHHCHH
T ss_pred CCHHHHHHHHHHHHHhccccccCccccchhhccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCcHHHHHHHHccc
Confidence 3333377899999999854 344566665333 444444444431 11122222
Q ss_pred ----------CCcccchhhhhhhhhccccch----------------------------HHHH----HHHHhcCCchHHH
Q 047433 103 ----------DQNIYIPYYAAHVIGSYTMNK----------------------------VEFA----EKAVKSGVIPPLM 140 (614)
Q Consensus 103 ----------~~~~~~~yy~ah~~gsy~~~~----------------------------~~~~----~~av~~~~~~~l~ 140 (614)
..+.-|=|.|+.++|.-|-.. .+|- +.-+++|+||+|+
T Consensus 422 ~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV 501 (810)
T 3now_A 422 SIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTALC 501 (810)
T ss_dssp HHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred hHHHHHHHhCCCChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcCHHHHH
Confidence 234557799999999877632 1233 5567999999999
Q ss_pred HHhcccchhhHHHHHHHHhhhhhhcccchhHHhhhHHHHHHHHHHH
Q 047433 141 ELLRGKISWVEQRVAVRALGHLASYDRTFDSVAVYEEEVVKLAMQL 186 (614)
Q Consensus 141 ~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~~~~~~~~~~~~~~ 186 (614)
.||+-.-. -=|.-|++||+.||+.+..=..|..++ +++.=+++
T Consensus 502 ~LL~s~s~-~vqe~Aa~aL~NLA~d~~~r~~Vv~~G--aip~Lv~L 544 (810)
T 3now_A 502 ALAKTESH-NSQELIARVLNAVCGLKELRGKVVQEG--GVKALLRM 544 (810)
T ss_dssp HHHTCCCH-HHHHHHHHHHHHHHTSHHHHHHHHHTT--HHHHHHHH
T ss_pred HHHcCCCH-HHHHHHHHHHHHHcCCHHHHHHHHHCC--CHHHHHHH
Confidence 99985332 237789999999998765444555544 44444444
No 263
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=85.95 E-value=10 Score=41.09 Aligned_cols=96 Identities=8% Similarity=-0.125 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGV--CPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel--~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
.+...-+.+.+.|++++|...|.+..+. .|+ ...|+-+-.+|.+.|++++|...+++..+..-. ++...|
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~--Pd~~ty 178 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR------LRSYGPALFGFCRKGDADKAYEVDAHMVESEVV--PEEPEL 178 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCC--CCHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc------cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCC--CCHHHH
Confidence 5667778888999999999999988765 354 788999999999999999999999998764321 247889
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHc
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMFING 528 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kALkl 528 (614)
.-+-.++...|+.++|...|++.-+.
T Consensus 179 ~~Li~~~~~~g~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 179 AALLKVSMDTKNADKVYKTLQRLRDL 204 (501)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999998765
No 264
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=84.73 E-value=0.68 Score=48.84 Aligned_cols=106 Identities=15% Similarity=0.131 Sum_probs=75.4
Q ss_pred chhHhhHHHHHhhcCCCCCC-CccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCC
Q 047433 57 HVLALSGLWNIAMTQPDDPL-FPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGV 135 (614)
Q Consensus 57 ~~~~~~~~~~~~~~~p~~~~-~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~ 135 (614)
+..++..|+|++...++..+ +-+.|++.-+..++. +.+.-+=..++.+++..+...++....-++.|+
T Consensus 118 ~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~-----------~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~ 186 (529)
T 1jdh_A 118 LFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLN-----------KTNVKFLAITTDCLQILAYGNQESKLIILASGG 186 (529)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGG-----------CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHh-----------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCC
Confidence 33588889998887654322 224566665555543 233445566777888888877888888889999
Q ss_pred chHHHHHhcccchhhHHHHHHHHhhhhhhcccchhHHh
Q 047433 136 IPPLMELLRGKISWVEQRVAVRALGHLASYDRTFDSVA 173 (614)
Q Consensus 136 ~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~ 173 (614)
||+|+++|+..-..+-+..|.++|..|++....=..+.
T Consensus 187 i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~ 224 (529)
T 1jdh_A 187 PQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIV 224 (529)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHH
T ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 99999999987777777789999999998665434433
No 265
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.90 E-value=8 Score=41.46 Aligned_cols=106 Identities=13% Similarity=-0.077 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh-hCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHh----cCCCCCc
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALG-VCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALC----LSNPPNS 497 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIe-l~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALe----LdP~~~~ 497 (614)
+.--...+..++..|+|.+|......... ..-.....++..++.--...|+..++|..|....+++.. ..+....
T Consensus 137 arl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~l 216 (445)
T 4b4t_P 137 ARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESL 216 (445)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHH
Confidence 33456678889999999999999887653 333334667888999999999999999999999988742 2222111
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 047433 498 HCKSLWRRSQAYDMKGLGRESLMDCIMFING 528 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG~yeEAL~df~kALkl 528 (614)
...-+...|..+...++|.+|-.+|..++..
T Consensus 217 k~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 217 KLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 2334455688888999999999999999875
No 266
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=82.89 E-value=52 Score=35.33 Aligned_cols=93 Identities=8% Similarity=-0.172 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcC-CcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLR-EPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLG-dyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
..|..-+....+.++.+.|-..|.+| . .|.. ....|...|..-...+ +++.|...+..+++..|+ .++.+
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A-~-~~~~----~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~---~~~~~ 357 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL-G-NEGV----GPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPD---STLLK 357 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH-T-TSCC----CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTT---CHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-h-CCCC----ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCC---CHHHH
Confidence 34555566555677899999999999 4 4431 1556766676666666 699999999999998888 77766
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMF 525 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kA 525 (614)
...+.-...+|+.+.|...|+++
T Consensus 358 ~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 358 EEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 66677778889999988888887
No 267
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=82.88 E-value=6.6 Score=42.43 Aligned_cols=103 Identities=9% Similarity=-0.166 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCc-----------------------------------chhHHHHHHH
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPK-----------------------------------NERMVLYSNR 468 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~-----------------------------------~~~a~lysNR 468 (614)
..|..-+.-+...|+.+.|...|.+|+.. |.+.. .....+|.+.
T Consensus 214 ~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y 292 (493)
T 2uy1_A 214 EVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINH 292 (493)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHH
Confidence 35666677777788999999999999998 87510 0011234444
Q ss_pred HHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHcCCC
Q 047433 469 AQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKG-LGRESLMDCIMFINGCIR 531 (614)
Q Consensus 469 A~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG-~yeEAL~df~kALkl~P~ 531 (614)
+....+.++.+.|...+.+| +..+. ....|...|..-...+ +.+.|...|+.+++..|+
T Consensus 293 ~~~~~r~~~~~~AR~i~~~A-~~~~~---~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~ 352 (493)
T 2uy1_A 293 LNYVLKKRGLELFRKLFIEL-GNEGV---GPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPD 352 (493)
T ss_dssp HHHHHHHHCHHHHHHHHHHH-TTSCC---CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTT
T ss_pred HHHHHHcCCHHHHHHHHHHh-hCCCC---ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCC
Confidence 44455677889999999999 43333 5667777777777677 599999999999998875
No 268
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=82.61 E-value=15 Score=35.64 Aligned_cols=93 Identities=11% Similarity=0.053 Sum_probs=69.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHH--hcC--CCCC-------
Q 047433 428 QEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRAL--CLS--NPPN------- 496 (614)
Q Consensus 428 ~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~AL--eLd--P~~~------- 496 (614)
..+-.+|-.|.|..|+-... .+ +. +...+-.+.||.++++|..|+...+..| +.+ |+..
T Consensus 38 L~~I~LyyngEY~R~Lf~L~---~l--NT-----~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ff 107 (242)
T 3kae_A 38 LMSIVLYLNGEYTRALFHLH---KL--NT-----CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMF 107 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHH---TC--CB-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTS
T ss_pred hhhhhhhhcchHhHHHHHHH---hc--ch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceee
Confidence 45677888898888776543 22 23 6777778999999999999999999999 333 3211
Q ss_pred ---ccHHH-HHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 497 ---SHCKS-LWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 497 ---~~~KA-yyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
..-+- +.-.|..+..+|+-+||+..|.+.....|
T Consensus 108 vd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 108 VDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp CCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred eccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCcc
Confidence 12233 33568899999999999999999999876
No 269
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=81.94 E-value=6.8 Score=40.01 Aligned_cols=58 Identities=10% Similarity=-0.136 Sum_probs=54.6
Q ss_pred HHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 470 QCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 470 ~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
..+++.|+.++|+..+...++-+|. +.+.-.-+.+.+.-.|+++.|.+.++.+.+++|
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~---da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p 62 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPK---DASLRSSFIELLCIDGDFERADEQLMQSIKLFP 62 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCG
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCc---CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Confidence 3467889999999999999999999 999999999999999999999999999999977
No 270
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=80.89 E-value=6.7 Score=43.12 Aligned_cols=79 Identities=14% Similarity=0.048 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWR 504 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyR 504 (614)
-+...|.-..-...+..|...|.+|+.+.|.. ...|+.+|......|+.-+|+-.|.++|....+ +..|.-+
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~-----G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~P---f~~a~~n 225 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSN-----GQPYNQLAILASSKGDHLTTIFYYCRSIAVKFP---FPAASTN 225 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTB-----SHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBC---CHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCC-----CchHHHHHHHHhcccccHHHHHHHHHHHhcCCC---ChhHHHH
Confidence 46678888888889999999999999999999 999999999999999999999999999998887 8888888
Q ss_pred HHHHHHH
Q 047433 505 RSQAYDM 511 (614)
Q Consensus 505 RA~Al~~ 511 (614)
+...+..
T Consensus 226 L~~~f~~ 232 (497)
T 1ya0_A 226 LQKALSK 232 (497)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887765
No 271
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=80.83 E-value=1.5 Score=43.58 Aligned_cols=73 Identities=25% Similarity=0.138 Sum_probs=47.8
Q ss_pred hhhhhhhccccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhc-ccchhHHhhhHHHHHHHHHHH
Q 047433 111 YAAHVIGSYTMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASY-DRTFDSVAVYEEEVVKLAMQL 186 (614)
Q Consensus 111 y~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~-~~~f~~~~~~~~~~~~~~~~~ 186 (614)
.||-.|..-+.+..+--..-+++|+||||++||+-. +=.-|+.|+.||..|++. +..=.+|.+++ .|+.-+++
T Consensus 29 ~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~-~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~G--aI~~Lv~l 102 (233)
T 3tt9_A 29 AAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQ-NEDVQRAVCGALRNLVFEDNDNKLEVAELN--GVPRLLQV 102 (233)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCC-CHHHHHHHHHHHHHHHTTCHHHHHHHHHTT--HHHHHHHH
T ss_pred HHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCC-CHHHHHHHHHHHHHHHhCCHHHHHHHHHcC--CHHHHHHH
Confidence 355555554544444444556899999999999874 445699999999999984 33334555544 34444443
No 272
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=78.40 E-value=1.8 Score=47.87 Aligned_cols=107 Identities=16% Similarity=0.117 Sum_probs=73.8
Q ss_pred chhHhhHHHHHhhcCCCCC-CCccccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCC
Q 047433 57 HVLALSGLWNIAMTQPDDP-LFPALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGV 135 (614)
Q Consensus 57 ~~~~~~~~~~~~~~~p~~~-~~~~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~ 135 (614)
+..++..|+|++...++.- .+...|++.-+..++..+ |.-+-..++.+++..+....+....-++.|+
T Consensus 115 ~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~-----------~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~ 183 (644)
T 2z6h_A 115 LFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT-----------NVKFLAITTDCLQILAYGNQESKLIILASGG 183 (644)
T ss_dssp HHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCC-----------CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcC-----------CHHHHHHHHHHHHHHHhcCcHHHHHHHHcCC
Confidence 3358888888887653221 223467766666555432 3335556667787777767777788889999
Q ss_pred chHHHHHhcccchhhHHHHHHHHhhhhhhcccchhHHhh
Q 047433 136 IPPLMELLRGKISWVEQRVAVRALGHLASYDRTFDSVAV 174 (614)
Q Consensus 136 ~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~~ 174 (614)
||+|+++|+..-...-++.|+++|..|+.....-..+..
T Consensus 184 v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~ 222 (644)
T 2z6h_A 184 PQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVE 222 (644)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred hHHHHHHHHcCChHHHHHHHHHHHHHHhcCcccHHHHHH
Confidence 999999999775545566899999999987665555443
No 273
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=77.85 E-value=1.8 Score=49.56 Aligned_cols=106 Identities=16% Similarity=0.116 Sum_probs=78.1
Q ss_pred hHhhHHHHHhhcCCCCCCCc-cccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCCch
Q 047433 59 LALSGLWNIAMTQPDDPLFP-ALGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIP 137 (614)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~-~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~ 137 (614)
.++..|+|++...++.-... +.|++..+..|+.. .|.-+=..|+.++...+...++.....++.|.||
T Consensus 253 ~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~-----------~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~ 321 (780)
T 2z6g_A 253 HAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK-----------TNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 321 (780)
T ss_dssp HHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGC-----------CCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHH
T ss_pred HHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhc-----------CCHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHH
Confidence 58888899988766544333 46777777766643 3344555677777766666677777778999999
Q ss_pred HHHHHhcccchhhHHHHHHHHhhhhhhcccchhHHhhh
Q 047433 138 PLMELLRGKISWVEQRVAVRALGHLASYDRTFDSVAVY 175 (614)
Q Consensus 138 ~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~~~ 175 (614)
+|+.+|+..-.-+-+..|+++|..|+.....++.|...
T Consensus 322 ~Lv~lL~~~~~~~~~~~a~~aL~~Ls~~~~~~~~i~~~ 359 (780)
T 2z6g_A 322 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEA 359 (780)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHHTSTTHHHHHHHT
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhcChHHHHHHHHh
Confidence 99999997755555667899999999988888777654
No 274
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=77.59 E-value=0.86 Score=53.12 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=67.8
Q ss_pred hHhhHHHHHhhcCCCCCCCcc---ccHHHHHHHHHHhhcCCccccccCCcccchhhhhhhhhccccchHHHHHHHHhcCC
Q 047433 59 LALSGLWNIAMTQPDDPLFPA---LGIFNCMSSLISKGVNNRDWLLRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGV 135 (614)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~---lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~ 135 (614)
.+...|.|++.+...++-|+. .|++.....|+. ++.+...-+.|+-.++..+-..++..+..|++|+
T Consensus 555 ~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~----------~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~ 624 (810)
T 3now_A 555 HATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQ----------QDCTALENFESLMALTNLASMNESVRQRIIKEQG 624 (810)
T ss_dssp HHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTS----------TTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTH
T ss_pred HHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhC----------CCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCC
Confidence 366677787776433344432 444444444442 1234444466777788777777889999999999
Q ss_pred chHHHHHhcccchhhHHHHHHHHhhhhhhccc
Q 047433 136 IPPLMELLRGKISWVEQRVAVRALGHLASYDR 167 (614)
Q Consensus 136 ~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~ 167 (614)
||+|++||...=.= =|+.|+++|+.|++++.
T Consensus 625 l~~Lv~LL~s~~~~-Vq~~A~~~L~NLa~~~~ 655 (810)
T 3now_A 625 VSKIEYYLMEDHLY-LTRAAAQCLCNLVMSED 655 (810)
T ss_dssp HHHHHHHHHSCCTT-HHHHHHHHHHHHTTSHH
T ss_pred HHHHHHHHcCCCHH-HHHHHHHHHHHHhCChH
Confidence 99999999876433 38999999999998764
No 275
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=76.98 E-value=2.7 Score=47.18 Aligned_cols=81 Identities=16% Similarity=0.002 Sum_probs=56.0
Q ss_pred CCcccchhhhhhhhhccccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhcc--cchhHHhhhHHHHH
Q 047433 103 DQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASYD--RTFDSVAVYEEEVV 180 (614)
Q Consensus 103 ~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~--~~f~~~~~~~~~~~ 180 (614)
..+.-+=..||-.|..-+...++.-..-+++|+||||++||+-. +-.-|+.|+.||+.|++++ ..=.+|.+++ .|
T Consensus 59 s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~-~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~G--aI 135 (584)
T 3l6x_A 59 FRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHP-KKEVHLGACGALKNISFGRDQDNKIAIKNCD--GV 135 (584)
T ss_dssp CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCS-SHHHHHHHHHHHHHHTSSSCHHHHHHHHHTT--HH
T ss_pred CCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCC-CHHHHHHHHHHHHHHHccCCHHHHHHHHHcC--CH
Confidence 34444556777777766666666667778999999999999865 4456899999999999873 3334455443 34
Q ss_pred HHHHHH
Q 047433 181 KLAMQL 186 (614)
Q Consensus 181 ~~~~~~ 186 (614)
+.-+++
T Consensus 136 p~LV~L 141 (584)
T 3l6x_A 136 PALVRL 141 (584)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 276
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=75.25 E-value=1.5 Score=46.82 Aligned_cols=61 Identities=23% Similarity=0.144 Sum_probs=47.8
Q ss_pred CcccchhhhhhhhhccccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhc
Q 047433 104 QNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASY 165 (614)
Q Consensus 104 ~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~ 165 (614)
.+.-+=..|+..|+..+.+.+..-..-+++|+||+|+++|+..-. --|+.|++||..|++.
T Consensus 14 ~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~-~~~~~A~~aL~nLa~~ 74 (457)
T 1xm9_A 14 QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQ-NVQQAAAGALRNLVFR 74 (457)
T ss_dssp SCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCH-HHHHHHHHHHHHHHSS
T ss_pred CCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCH-HHHHHHHHHHHHHhcC
Confidence 344556788888888776665555566799999999999986544 3489999999999985
No 277
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=73.57 E-value=13 Score=39.00 Aligned_cols=60 Identities=13% Similarity=0.050 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRAL 489 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~AL 489 (614)
.+...+..+...|++.+|+....+++..+|.+ -.+|..+-.+|...|+..+|+..|++.-
T Consensus 173 a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~-----E~~~~~lm~al~~~Gr~~~Al~~y~~~r 232 (388)
T 2ff4_A 173 AHTAKAEAEIACGRASAVIAELEALTFEHPYR-----EPLWTQLITAYYLSDRQSDALGAYRRVK 232 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44556677888999999999999999999998 7899999999999999999999887753
No 278
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=70.67 E-value=6.6 Score=41.79 Aligned_cols=85 Identities=7% Similarity=-0.065 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCChHhhcc
Q 047433 461 RMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSETTSKRVK 540 (614)
Q Consensus 461 ~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~D~~~k~k 540 (614)
...++..+|..|++.|++++|++.+.++.............++...+++...+++..+...+.++-.+.....|++.+.+
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~ 209 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNR 209 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHH
Confidence 45678889999999999999999999998765443346789999999999999999999999999887665566665555
Q ss_pred hHHHH
Q 047433 541 IPYYA 545 (614)
Q Consensus 541 l~~y~ 545 (614)
+..|.
T Consensus 210 lk~~~ 214 (429)
T 4b4t_R 210 YKTYY 214 (429)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 279
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=69.41 E-value=25 Score=33.19 Aligned_cols=71 Identities=11% Similarity=-0.072 Sum_probs=59.1
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCC
Q 047433 435 WLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGL 514 (614)
Q Consensus 435 k~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~ 514 (614)
..+|.++|-+.|..++.++... +-+|...|+--++.|+..+|.+-..+||.+.|. .+-.+..|....+.|+
T Consensus 72 ei~D~d~aR~vy~~a~~~hKkF-----AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k----~~~~le~a~~nl~~~~ 142 (161)
T 4h7y_A 72 AIQEPDDARDYFQMARANCKKF-----AFVHISFAQFELSQGNVKKSKQLLQKAVERGAV----PLEMLEIALRNLNLQK 142 (161)
T ss_dssp HHHCGGGCHHHHHHHHHHCTTB-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB----CHHHHHHHHHHHHTTC
T ss_pred HhcCHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCC----cHHHHHHHHHhhhcCC
Confidence 3478999999999999997666 999999999999999999999999999999997 4555555555555554
No 280
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=69.11 E-value=20 Score=29.48 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR 456 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~ 456 (614)
-..-...|..+...|++++|+.++.+||..+|.-
T Consensus 17 Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 17 FLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 3355678999999999999999999999999974
No 281
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=68.24 E-value=25 Score=38.10 Aligned_cols=83 Identities=10% Similarity=0.080 Sum_probs=69.8
Q ss_pred CCHHHHHHHHHHHHhh--CCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc--CCCCCccHHHHHHHHHHHHHc
Q 047433 437 GEIEEAAMKYTEALGV--CPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCL--SNPPNSHCKSLWRRSQAYDMK 512 (614)
Q Consensus 437 GdyeeAI~~YtkAIel--~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL--dP~~~~~~KAyyRRA~Al~~L 512 (614)
++.+.|.+.|.+-.+. .|+ ...|+.+-.+|.+.|++++|+..+++..+. .|+ ...|.-+-.+|...
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd----~~tyn~lI~~~~~~ 153 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPN------EATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR----LRSYGPALFGFCRK 153 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC----HHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHhCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc----cceehHHHHHHHHC
Confidence 3468888888887664 354 688999999999999999999999988764 454 88888899999999
Q ss_pred CCHHHHHHHHHHHHHcC
Q 047433 513 GLGRESLMDCIMFINGC 529 (614)
Q Consensus 513 G~yeEAL~df~kALkl~ 529 (614)
|+.++|.+.|++..+..
T Consensus 154 g~~~~A~~l~~~M~~~G 170 (501)
T 4g26_A 154 GDADKAYEVDAHMVESE 170 (501)
T ss_dssp TCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcC
Confidence 99999999999988753
No 282
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=67.31 E-value=19 Score=39.61 Aligned_cols=27 Identities=19% Similarity=0.042 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHH
Q 047433 462 MVLYSNRAQCHLLLREPDAAISDATRA 488 (614)
Q Consensus 462 a~lysNRA~~ylkLGdyeeAI~D~~~A 488 (614)
...|.++|..+++.++++.|+..|.++
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 455666666666666666666655553
No 283
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=67.07 E-value=9.5 Score=31.95 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047433 420 RVLVGLIKQEAKHLFWLGEIEEAAMKYTEALGV 452 (614)
Q Consensus 420 ~~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel 452 (614)
...|..+..+|...=+.|+|++|+..|.+||+.
T Consensus 16 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 16 EEMARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 457778888999999999999999999998875
No 284
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=65.79 E-value=9.1 Score=31.91 Aligned_cols=32 Identities=22% Similarity=0.142 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGV 452 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel 452 (614)
..|..+..+|...=+.|+|++|+..|.+||+.
T Consensus 9 ~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 9 DMARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 46778888899999999999999999988874
No 285
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=63.58 E-value=17 Score=39.80 Aligned_cols=63 Identities=11% Similarity=-0.093 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 047433 463 VLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFING 528 (614)
Q Consensus 463 ~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl 528 (614)
.++.++|....-...+..|...|.+|+.++|+ +..+|..+|......|+.-+|+=.|.+++-.
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~---~G~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPS---NGQPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCC---CCchHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 35566677777777889999999999999999 9999999999999999999999999988754
No 286
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=63.28 E-value=37 Score=37.27 Aligned_cols=27 Identities=11% Similarity=-0.111 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEA 449 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkA 449 (614)
...|+..|..+.+.|+++.|+..|.++
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 347999999999999999999999875
No 287
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=60.05 E-value=18 Score=43.36 Aligned_cols=97 Identities=10% Similarity=-0.105 Sum_probs=74.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------------------CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHH
Q 047433 427 KQEAKHLFWLGEIEEAAMKYTEALGVCPSR------------------PKNERMVLYSNRAQCHLLLREPDAAISDATRA 488 (614)
Q Consensus 427 K~~GN~lFk~GdyeeAI~~YtkAIel~P~~------------------~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~A 488 (614)
.-+|..++..|++++|...|.+|-.-.... ....++.+|......+.+.+-++.+++.++.|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 678999999999999999998874221110 12234567888888999999999999999999
Q ss_pred HhcCCCCCcc--HHHHHHHHHHHHHcCCHHHHHHHHH
Q 047433 489 LCLSNPPNSH--CKSLWRRSQAYDMKGLGRESLMDCI 523 (614)
Q Consensus 489 LeLdP~~~~~--~KAyyRRA~Al~~LG~yeEAL~df~ 523 (614)
|+..+....+ ...|.+.-..+..+|+|++|...+.
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 9876542222 2357788899999999999977654
No 288
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=57.30 E-value=16 Score=30.27 Aligned_cols=31 Identities=26% Similarity=0.050 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGV 452 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel 452 (614)
.|..+..+|...=..|+|++|+..|.+|++.
T Consensus 12 ~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 12 KGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5667777888888899999999999998875
No 289
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=56.36 E-value=58 Score=31.00 Aligned_cols=82 Identities=9% Similarity=-0.115 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHH
Q 047433 423 VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSL 502 (614)
Q Consensus 423 A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAy 502 (614)
...|+..|..+...|+++-|..+|.++=. +..+...|.-.|+-++-..-.+.|..-+ + +
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D-------------~~~L~~Ly~~tg~~e~L~kla~iA~~~g-~-------~ 92 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQHS-------------FDKLSFLYLVTGDVNKLSKMQNIAQTRE-D-------F 92 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTTC-------------HHHHHHHHHHHTCHHHHHHHHHHHHHTT-C-------H
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhCC-------------HHHHHHHHHHhCCHHHHHHHHHHHHHCc-c-------H
Confidence 34799999999999999999999987533 2233444555666555444444443222 2 1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Q 047433 503 WRRSQAYDMKGLGRESLMDCIMF 525 (614)
Q Consensus 503 yRRA~Al~~LG~yeEAL~df~kA 525 (614)
.-...++..+|+++++++.|.+.
T Consensus 93 n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 93 GSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHC
Confidence 22345677778888887776554
No 290
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=55.17 E-value=17 Score=30.81 Aligned_cols=31 Identities=16% Similarity=0.125 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGV 452 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel 452 (614)
.|..+..+|...=+.|+|++|+..|.+||+.
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 5667777888888889999999998888874
No 291
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=53.78 E-value=17 Score=30.52 Aligned_cols=31 Identities=16% Similarity=0.146 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGV 452 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel 452 (614)
.+..+..+|-..-+.|+|++|+..|.+||+.
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4556777888888999999999999998875
No 292
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=51.27 E-value=20 Score=31.82 Aligned_cols=31 Identities=23% Similarity=0.076 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGV 452 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel 452 (614)
.|..+..+|...=..|+|++|+..|.+||++
T Consensus 17 kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 17 KAIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 5566777777777788888888888887774
No 293
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=47.78 E-value=41 Score=35.01 Aligned_cols=102 Identities=16% Similarity=0.016 Sum_probs=64.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---CcchhHH-------HHHHHHHHHHHc--CCcH-HHHHHHHHHH---
Q 047433 426 IKQEAKHLFWLGEIEEAAMKYTEALGVCPSR---PKNERMV-------LYSNRAQCHLLL--REPD-AAISDATRAL--- 489 (614)
Q Consensus 426 lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~---~~~~~a~-------lysNRA~~ylkL--Gdye-eAI~D~~~AL--- 489 (614)
..+.|-.+|..|+|++|+..|...|..-|-. .+++... +..-.-..-+++ ++.. ...++-.+.+
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 3467999999999999999999999876532 2222222 222222222233 2211 0123334444
Q ss_pred ------hcCCCCCccHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHcCC
Q 047433 490 ------CLSNPPNSHCKSLWRRSQ-AYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 490 ------eLdP~~~~~~KAyyRRA~-Al~~LG~yeEAL~df~kALkl~P 530 (614)
+|.|. |.-.=.|.|. ..++.++|.-|...-++.|++.|
T Consensus 185 AYFT~c~Lqp~---H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p 229 (320)
T 3mkr_B 185 AYFTHSNLQPV---HMILVLRTALNLFFKLKNFRTAAAFARRLLELGP 229 (320)
T ss_dssp HHHTTSCCCHH---HHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCC
T ss_pred HHhccCCCcHH---HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 34666 6655566665 56788999999999999999977
No 294
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=47.47 E-value=1.8e+02 Score=35.07 Aligned_cols=95 Identities=6% Similarity=-0.189 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHh-----hCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhc--CCCCCc
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALG-----VCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCL--SNPPNS 497 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIe-----l~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeL--dP~~~~ 497 (614)
.+...-+.+.+.|+.++|...+.+.-+ ..|+ ...|+-+-..|.+.|+.++|+..+++..+- .|+
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd------vvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PD--- 199 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT------LDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPD--- 199 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC---
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC------HhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCc---
Confidence 477777889999999999999976432 3454 789999999999999999999999998764 454
Q ss_pred cHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHcC
Q 047433 498 HCKSLWRRSQAYDMKGLG-RESLMDCIMFINGC 529 (614)
Q Consensus 498 ~~KAyyRRA~Al~~LG~y-eEAL~df~kALkl~ 529 (614)
...|.-+-.++...|+. ++|...|++..+..
T Consensus 200 -vvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 200 -LLSYAAALQCMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp -HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Confidence 88888888899999985 78888898888763
No 295
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=45.23 E-value=54 Score=36.96 Aligned_cols=63 Identities=14% Similarity=-0.003 Sum_probs=51.9
Q ss_pred cCCHHHHHHHHHH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCC
Q 047433 410 MMSEEKVEEMRVL----VGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLRE 477 (614)
Q Consensus 410 ~ls~eel~~~~~~----A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGd 477 (614)
.+++.+...+... +.....+|..++..|+|.-|.+..+.++..+|++ ..+..-+|.+|.++|.
T Consensus 432 ~l~p~~~a~~~v~~~gg~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~-----~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 432 PLSPEDSAGRYVEYMGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDN-----RAARELQADALEQLGY 498 (658)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc-----HHHHHHHHHHHHHHHH
Confidence 4555555444443 5678889999999999999999999999999999 8888889998888774
No 296
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=44.68 E-value=19 Score=41.84 Aligned_cols=59 Identities=19% Similarity=0.187 Sum_probs=42.0
Q ss_pred HHHHHH-HhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhcccchhHHhhhHHHHHHHHHHH
Q 047433 125 EFAEKA-VKSGVIPPLMELLRGKISWVEQRVAVRALGHLASYDRTFDSVAVYEEEVVKLAMQL 186 (614)
Q Consensus 125 ~~~~~a-v~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~~~~~~~~~~~~~~~~~ 186 (614)
+|-.++ +++||||+|+.+++.- +-.=|..|+|+|++|+....+=..|...+ .++.-+++
T Consensus 447 ~~~~~~l~eaGvIp~Lv~Ll~S~-s~~~re~A~~aL~nLS~d~~~R~~lvqqG--al~~LL~l 506 (778)
T 3opb_A 447 LFNEKYILRTELISFLKREMHNL-SPNCKQQVVRIIYNITRSKNFIPQLAQQG--AVKIILEY 506 (778)
T ss_dssp HHHHHHTTTTTHHHHHHHHGGGS-CHHHHHHHHHHHHHHHTSGGGHHHHHHTT--HHHHHHHH
T ss_pred HHHHHHHHHCcCHHHHHHHHcCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHCC--CHHHHHHH
Confidence 333345 4899999999999763 66678999999999988766655666544 34444444
No 297
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=44.31 E-value=31 Score=36.03 Aligned_cols=102 Identities=13% Similarity=-0.053 Sum_probs=62.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---CcchhHHH-------HHHHHHHHHHcCCcHHHHHHHHHHH------
Q 047433 426 IKQEAKHLFWLGEIEEAAMKYTEALGVCPSR---PKNERMVL-------YSNRAQCHLLLREPDAAISDATRAL------ 489 (614)
Q Consensus 426 lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~---~~~~~a~l-------ysNRA~~ylkLGdyeeAI~D~~~AL------ 489 (614)
..+.|-.+|..|+|++|+..|...|..-|-. .+++...+ ..-.-..-+++.+-+-.-.+-.+.+
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 3447999999999999999999999865431 22222222 2222122222211000001223333
Q ss_pred ---hcCCCCCccHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHcCC
Q 047433 490 ---CLSNPPNSHCKSLWRRSQ-AYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 490 ---eLdP~~~~~~KAyyRRA~-Al~~LG~yeEAL~df~kALkl~P 530 (614)
+|.|. |.-.=.|.|. ..++.++|.-|....++.|++.|
T Consensus 197 T~c~LQp~---H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p 238 (325)
T 3mv2_A 197 TKAKLSPI---HRTNALQVAMSQHFKHKNFLQASYFAGEFLKIIS 238 (325)
T ss_dssp GGSCCCHH---HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred ccCCCcHH---HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 34666 6555556665 56788999999999999999987
No 298
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=41.11 E-value=33 Score=29.68 Aligned_cols=33 Identities=24% Similarity=0.245 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047433 424 GLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSR 456 (614)
Q Consensus 424 ~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~ 456 (614)
..-...|..+...|+++.|+.++.+||.+||.-
T Consensus 21 l~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 21 LEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 345678999999999999999999999999973
No 299
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=37.28 E-value=2.2e+02 Score=33.99 Aligned_cols=92 Identities=13% Similarity=-0.022 Sum_probs=65.2
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHh-cCC---------------
Q 047433 430 AKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALC-LSN--------------- 493 (614)
Q Consensus 430 GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALe-LdP--------------- 493 (614)
...++..+.++-|.+ -+..+|.+ +..-+-+|.+|+..|++++|...+.+|-. +..
T Consensus 819 ~~~l~~~~~~~~~~~----l~~~~~~~-----~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~ 889 (1139)
T 4fhn_B 819 VEKLFLFKQYNACMQ----LIGWLNSD-----PIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIA 889 (1139)
T ss_dssp HHHHHHHSCTTHHHH----HHHHSCCC-----HHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHH
T ss_pred HHHHHHhhhHHHHHH----HhhhccCC-----cHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhccccccc
Confidence 344666666655543 34567776 66667899999999999999999988732 111
Q ss_pred ----CCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 047433 494 ----PPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCI 530 (614)
Q Consensus 494 ----~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P 530 (614)
..+....-|+.....+...+.++.++...+.|++..+
T Consensus 890 ~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~ 930 (1139)
T 4fhn_B 890 EKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKE 930 (1139)
T ss_dssp HTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCC
T ss_pred ccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 1111234456667788889999999999999998765
No 300
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=35.09 E-value=77 Score=33.23 Aligned_cols=33 Identities=12% Similarity=0.245 Sum_probs=19.3
Q ss_pred hcCCchHHHHHhcccchhhHHHHHHHHhhhhhhc
Q 047433 132 KSGVIPPLMELLRGKISWVEQRVAVRALGHLASY 165 (614)
Q Consensus 132 ~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~ 165 (614)
...++|.|++++... .|--++.|+.+||.++..
T Consensus 279 ~~~l~~~l~~~l~d~-~~~vr~~a~~~l~~~~~~ 311 (588)
T 1b3u_A 279 KTDLVPAFQNLMKDC-EAEVRAAASHKVKEFCEN 311 (588)
T ss_dssp HHTHHHHHHHHHTCS-SHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHH
Confidence 344566777766654 333355666666666654
No 301
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=34.89 E-value=1.4e+02 Score=25.82 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047433 421 VLVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPS 455 (614)
Q Consensus 421 ~~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~ 455 (614)
+.+..+..+|..+|+.++|.+|...+.++..+..+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten 85 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSDN 85 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccC
Confidence 57788999999999999999999999999987654
No 302
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=34.62 E-value=2.7e+02 Score=29.46 Aligned_cols=62 Identities=8% Similarity=-0.149 Sum_probs=40.5
Q ss_pred HHHHHHHHcCCcHHHHHHHHHHHhcCC---CCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 047433 467 NRAQCHLLLREPDAAISDATRALCLSN---PPNSHCKSLWRRSQAYDMKGLGRESLMDCIMFING 528 (614)
Q Consensus 467 NRA~~ylkLGdyeeAI~D~~~ALeLdP---~~~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl 528 (614)
++|..|+..|+|.+|+..+++.++--. +...-...|.-..+.|..++++..+...|.++.+.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTT 168 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 667777777777777776666654221 21223456666677777777777777777777766
No 303
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=34.58 E-value=17 Score=35.03 Aligned_cols=55 Identities=15% Similarity=0.188 Sum_probs=35.2
Q ss_pred CcccchhhhhhhhhccccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhhcccchh
Q 047433 104 QNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLASYDRTFD 170 (614)
Q Consensus 104 ~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~~~~f~ 170 (614)
.|-.+=+.|+..+|... ...+||+|+++|...- +--++.|+++||.++..+.+++
T Consensus 35 ~~~~vr~~A~~~L~~~~-----------~~~~~~~L~~~l~d~~-~~vR~~A~~aL~~l~~~~~~~~ 89 (280)
T 1oyz_A 35 HNSLKRISSARVLQLRG-----------GQDAVRLAIEFCSDKN-YIRRDIGAFILGQIKICKKCED 89 (280)
T ss_dssp SSHHHHHHHHHHHHHHC-----------CHHHHHHHHHHHTCSS-HHHHHHHHHHHHHSCCCTTTHH
T ss_pred CCHHHHHHHHHHHHccC-----------CchHHHHHHHHHcCCC-HHHHHHHHHHHHHhccccccch
Confidence 34445566777766543 1246788888888764 4456778888888876544443
No 304
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=34.38 E-value=34 Score=31.06 Aligned_cols=28 Identities=25% Similarity=0.432 Sum_probs=12.6
Q ss_pred CCchHHHHHhcccchhhHHHHHHHHhhhh
Q 047433 134 GVIPPLMELLRGKISWVEQRVAVRALGHL 162 (614)
Q Consensus 134 ~~~~~l~~~~~~~~~wve~r~~~r~l~h~ 162 (614)
.++|+|+++|... .|--++.|++|||.+
T Consensus 138 ~~~~~L~~~l~d~-~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 138 RAVEPLIKALKDE-DGWVRQSAADALGEI 165 (201)
T ss_dssp GGHHHHHHHTTCS-SHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CHHHHHHHHHHHHHh
Confidence 3444455554433 333344445555544
No 305
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=34.35 E-value=30 Score=28.82 Aligned_cols=25 Identities=16% Similarity=0.097 Sum_probs=12.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFI 526 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kAL 526 (614)
+..+|.-....|+|++|+..|..++
T Consensus 22 lv~~Ave~D~~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 22 YAINAVKADKEGNAEEAITNYKKAI 46 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHH
Confidence 3344444455555555555555544
No 306
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=33.38 E-value=2.5e+02 Score=27.29 Aligned_cols=73 Identities=14% Similarity=-0.033 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hC--CCC---------CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALG--VC--PSR---------PKNERMVLYSNRAQCHLLLREPDAAISDATRA 488 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIe--l~--P~~---------~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~A 488 (614)
.+....-+.--+.+.++|..|+...+..|+ ++ |+- .+.+.--+++-.|...-++|+-++||..+.+.
T Consensus 61 T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~S 140 (242)
T 3kae_A 61 TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRS 140 (242)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhh
Confidence 344555566778899999999999999993 22 331 23445567778899999999999999999999
Q ss_pred HhcCCC
Q 047433 489 LCLSNP 494 (614)
Q Consensus 489 LeLdP~ 494 (614)
...+|-
T Consensus 141 f~~~~l 146 (242)
T 3kae_A 141 FGKSFL 146 (242)
T ss_dssp HHHCCC
T ss_pred cCCccc
Confidence 988875
No 307
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=32.39 E-value=34 Score=28.35 Aligned_cols=23 Identities=13% Similarity=-0.006 Sum_probs=10.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHH
Q 047433 504 RRSQAYDMKGLGRESLMDCIMFI 526 (614)
Q Consensus 504 RRA~Al~~LG~yeEAL~df~kAL 526 (614)
++|.-....|+|++|+..|..++
T Consensus 16 ~~Ave~D~~g~y~eAl~lY~~ai 38 (83)
T 2v6y_A 16 ILAVKADKEGKVEDAITYYKKAI 38 (83)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHH
Confidence 33344444455555555444444
No 308
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=32.38 E-value=1e+02 Score=34.09 Aligned_cols=76 Identities=11% Similarity=-0.053 Sum_probs=60.1
Q ss_pred cchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCC--CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Q 047433 458 KNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPP--NSHCKSLWRRSQAYDMKGLGRESLMDCIMFINGCIRSE 533 (614)
Q Consensus 458 ~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~--~~~~KAyyRRA~Al~~LG~yeEAL~df~kALkl~P~~~ 533 (614)
.+..+.+++-.=..|+..+.|+.|.....++.-..+.. +-...-+|..|.++...++|.+|...+..|+..+|.+.
T Consensus 227 ~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 227 NETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp SCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred cchhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 34557888888899999999999999999986322211 11245567789999999999999999999999998654
No 309
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=31.02 E-value=19 Score=31.01 Aligned_cols=48 Identities=27% Similarity=0.371 Sum_probs=32.7
Q ss_pred cccchhhhhhhhhccccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhh
Q 047433 105 NIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLAS 164 (614)
Q Consensus 105 ~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~ 164 (614)
+-.|=+.|+..+|...- ..+||+|+++|... .|--++.|++|||.+..
T Consensus 55 ~~~vR~~A~~aL~~~~~-----------~~a~~~L~~~L~d~-~~~VR~~A~~aL~~~~~ 102 (131)
T 1te4_A 55 DWRIRGAAAWIIGNFQD-----------ERAVEPLIKLLEDD-SGFVRSGAARSLEQIGG 102 (131)
T ss_dssp CHHHHHHHHHHHGGGCS-----------HHHHHHHHHHHHHC-CTHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHHhcCC-----------HHHHHHHHHHHcCC-CHHHHHHHHHHHHHhCc
Confidence 34556778888877541 12478888888754 45556788888888863
No 310
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=28.96 E-value=59 Score=28.13 Aligned_cols=28 Identities=29% Similarity=0.110 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHHHHcCCcHHHHHHHHHH
Q 047433 461 RMVLYSNRAQCHLLLREPDAAISDATRA 488 (614)
Q Consensus 461 ~a~lysNRA~~ylkLGdyeeAI~D~~~A 488 (614)
.+-.+..||..+++-|+|++||....+|
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHH
Confidence 3455666666677777777766654443
No 311
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=28.52 E-value=68 Score=27.78 Aligned_cols=30 Identities=13% Similarity=-0.060 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 047433 499 CKSLWRRSQAYDMKGLGRESLMDCIMFING 528 (614)
Q Consensus 499 ~KAyyRRA~Al~~LG~yeEAL~df~kALkl 528 (614)
+..+-||+..+...|+|++|+...+++..+
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~y 44 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATTY 44 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 455679999999999999999888877643
No 312
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=28.34 E-value=23 Score=41.07 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=35.6
Q ss_pred hhhhhhccccchHHHHHHHHhcCCchHHHHHhcccchhh--HHHHHHHHhhhhhh
Q 047433 112 AAHVIGSYTMNKVEFAEKAVKSGVIPPLMELLRGKISWV--EQRVAVRALGHLAS 164 (614)
Q Consensus 112 ~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wv--e~r~~~r~l~h~a~ 164 (614)
|+-+|++-+.+ .+.=..-|+.|++|||+.+|.-.=... =++.|++||.+|+.
T Consensus 477 A~~aL~nLS~d-~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLli 530 (778)
T 3opb_A 477 VVRIIYNITRS-KNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLI 530 (778)
T ss_dssp HHHHHHHHHTS-GGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-HHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHh
Confidence 44456666655 334445578999999999998764331 16789999999985
No 313
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=27.64 E-value=2.3e+02 Score=26.61 Aligned_cols=81 Identities=12% Similarity=-0.110 Sum_probs=52.1
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHH-cCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcC
Q 047433 435 WLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLL-LREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKG 513 (614)
Q Consensus 435 k~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylk-LGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG 513 (614)
.-|+...-+..|-+ ..-. .=|.++|.-++- .|+-+.--......+.-++. ++..++..|.||.++|
T Consensus 73 ~C~NlKrVi~C~~~---~n~~-------se~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~---~~~~l~kia~Ay~Klg 139 (172)
T 1wy6_A 73 KCQNLKSVVECGVI---NNTL-------NEHVNKALDILVIQGKRDKLEEIGREILKNNEV---SASILVAIANALRRVG 139 (172)
T ss_dssp GCSCTHHHHHHHHH---TTCC-------CHHHHHHHHHHHHTTCHHHHHHHHHHHC--CCS---CHHHHHHHHHHHHHTT
T ss_pred hhhcHHHHHHHHHH---hcch-------HHHHHHHHHHHHHhccHhHHHHHHHHHhccCCC---ChHHHHHHHHHHHHhc
Confidence 44566666666643 1221 125566655554 44433333333333455555 7999999999999999
Q ss_pred CHHHHHHHHHHHHHc
Q 047433 514 LGRESLMDCIMFING 528 (614)
Q Consensus 514 ~yeEAL~df~kALkl 528 (614)
+..+|-+.+.+|.+.
T Consensus 140 ~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 140 DERDATTLLIEACKK 154 (172)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred chhhHHHHHHHHHHh
Confidence 999999999999987
No 314
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=27.45 E-value=85 Score=34.63 Aligned_cols=27 Identities=7% Similarity=-0.006 Sum_probs=17.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 047433 502 LWRRSQAYDMKGLGRESLMDCIMFING 528 (614)
Q Consensus 502 yyRRA~Al~~LG~yeEAL~df~kALkl 528 (614)
||..|.-.+..|..++|..+-..+-++
T Consensus 490 yy~~AA~k~~yG~~eqAe~l~~~A~~~ 516 (526)
T 2wb7_A 490 YYVNAARKALNGDLEQAKIDAEKAKEY 516 (526)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHH
Confidence 444555556677888877776666555
No 315
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=27.33 E-value=1.8e+02 Score=32.56 Aligned_cols=92 Identities=12% Similarity=-0.049 Sum_probs=62.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHH
Q 047433 427 KQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRS 506 (614)
Q Consensus 427 K~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA 506 (614)
...+..++..+...++...+.+++...+++ .. ..-++..-++.|++..|...+.+.-.-... ..++.|=+|
T Consensus 256 ~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~---~~r~~YW~~ 326 (618)
T 1qsa_A 256 DIVAWRLMGNDVTDEQAKWRDDAIMRSQST---SL---IERRVRMALGTGDRRGLNTWLARLPMEAKE---KDEWRYWQA 326 (618)
T ss_dssp HHHHHTSCSTTCCHHHHHHHHHHHHTCCCH---HH---HHHHHHHHHHHTCHHHHHHHHHHSCTTGGG---SHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHHHHHHhccccCCCh---HH---HHHHHHHHHHCCCHHHHHHHHHHccccccc---cHhHHHHHH
Confidence 334445555564667788888876544332 22 222333345679999999988765442223 577888899
Q ss_pred HHHHHcCCHHHHHHHHHHHHH
Q 047433 507 QAYDMKGLGRESLMDCIMFIN 527 (614)
Q Consensus 507 ~Al~~LG~yeEAL~df~kALk 527 (614)
.++..+|+.++|...|+++.+
T Consensus 327 ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 327 DLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHhc
Confidence 999999999999999998875
No 316
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=26.12 E-value=57 Score=27.11 Aligned_cols=28 Identities=21% Similarity=0.222 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047433 425 LIKQEAKHLFWLGEIEEAAMKYTEALGV 452 (614)
Q Consensus 425 ~lK~~GN~lFk~GdyeeAI~~YtkAIel 452 (614)
.....|.++.-.|+|+.|+.+|+.+++.
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 4455677777788999999999988864
No 317
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=25.91 E-value=1.2e+02 Score=28.90 Aligned_cols=25 Identities=12% Similarity=-0.062 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHcCCcHHHHHHHHH
Q 047433 463 VLYSNRAQCHLLLREPDAAISDATR 487 (614)
Q Consensus 463 ~lysNRA~~ylkLGdyeeAI~D~~~ 487 (614)
..|..+|..-+..|+++-|...|.+
T Consensus 35 ~~Wk~Lg~~AL~~gn~~lAe~cy~~ 59 (177)
T 3mkq_B 35 ITWERLIQEALAQGNASLAEMIYQT 59 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHH
Confidence 3445555555555555554444443
No 318
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=25.59 E-value=52 Score=30.00 Aligned_cols=48 Identities=25% Similarity=0.394 Sum_probs=32.2
Q ss_pred cccchhhhhhhhhccccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhh
Q 047433 105 NIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLAS 164 (614)
Q Consensus 105 ~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~ 164 (614)
+-.+=..|+..+|...- ..++|+|+++|... .|.-++.|+++||.+..
T Consensus 32 ~~~vR~~A~~~L~~~~~-----------~~~~~~L~~~l~~~-~~~vr~~a~~aL~~~~~ 79 (211)
T 3ltm_A 32 SYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDE-DAWVRRAAADALGQIGD 79 (211)
T ss_dssp SHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCS-CHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCC-----------ccHHHHHHHHHcCC-CHHHHHHHHHHHHhhCC
Confidence 33444566666664321 36788888888866 56667888888888864
No 319
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=25.47 E-value=48 Score=28.36 Aligned_cols=51 Identities=18% Similarity=0.345 Sum_probs=36.6
Q ss_pred ccCCcccchhhhhhhhhccccchHHHHHHHHhcCCchHHHHHhcccchhhHHHHHHHHhhhhhh
Q 047433 101 LRDQNIYIPYYAAHVIGSYTMNKVEFAEKAVKSGVIPPLMELLRGKISWVEQRVAVRALGHLAS 164 (614)
Q Consensus 101 ~~~~~~~~~yy~ah~~gsy~~~~~~~~~~av~~~~~~~l~~~~~~~~~wve~r~~~r~l~h~a~ 164 (614)
+++.|-.+=+.|+..+|...- ..+|+|+++|.. =.|.-++.|++|||++..
T Consensus 21 L~~~~~~vR~~A~~~L~~~~~------------~~~~~L~~~L~d-~~~~vR~~A~~aL~~~~~ 71 (131)
T 1te4_A 21 MADENKWVRRDVSTALSRMGD------------EAFEPLLESLSN-EDWRIRGAAAWIIGNFQD 71 (131)
T ss_dssp CCSSCCCSSSSCCSSTTSCSS------------TTHHHHHHGGGC-SCHHHHHHHHHHHGGGCS
T ss_pred hcCCCHHHHHHHHHHHHHhCc------------hHHHHHHHHHcC-CCHHHHHHHHHHHHhcCC
Confidence 344455555667777775431 136999999986 568889999999999985
No 320
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=25.27 E-value=2.3e+02 Score=26.98 Aligned_cols=58 Identities=10% Similarity=0.120 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCcchhHHHHHHHHHHHHHcCCcH
Q 047433 422 LVGLIKQEAKHLFWLGEIEEAAMKYTEALGVCPSRPKNERMVLYSNRAQCHLLLREPD 479 (614)
Q Consensus 422 ~A~~lK~~GN~lFk~GdyeeAI~~YtkAIel~P~~~~~~~a~lysNRA~~ylkLGdye 479 (614)
.+.-..-.|.-++.+++|.+|-+.+++|+..+|......+-.++.-+--+-+.+|++.
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 5567788899999999999999999999999997643444444555555556778865
No 321
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=23.48 E-value=55 Score=29.85 Aligned_cols=15 Identities=20% Similarity=0.372 Sum_probs=8.2
Q ss_pred ccCCCchhhhhhHHH
Q 047433 30 MEEPNSSLRRAGVAS 44 (614)
Q Consensus 30 ~~~~~~~~~~~~~~~ 44 (614)
++.+|+..|+.-+..
T Consensus 28 L~~~~~~vR~~A~~~ 42 (211)
T 3ltm_A 28 LQDDSYYVRRAAAYA 42 (211)
T ss_dssp TTCSSHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHH
Confidence 455666666554433
No 322
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=22.85 E-value=95 Score=29.65 Aligned_cols=36 Identities=8% Similarity=-0.066 Sum_probs=27.0
Q ss_pred chhHHHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCC
Q 047433 459 NERMVLYSNRAQCHLLLREPDAAISDATRALCLSNP 494 (614)
Q Consensus 459 ~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~ 494 (614)
...+.+++-+|..++..++|.+|-.++..|++.-|.
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~ 46 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHR 46 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCH
Confidence 345667777777787888888888888888877766
No 323
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=22.18 E-value=1.1e+02 Score=34.40 Aligned_cols=53 Identities=11% Similarity=0.013 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHcCCHHHH
Q 047433 463 VLYSNRAQCHLLLREPDAAISDATRALCLSNPPNSHCKSLWRRSQAYDMKGLGRES 518 (614)
Q Consensus 463 ~lysNRA~~ylkLGdyeeAI~D~~~ALeLdP~~~~~~KAyyRRA~Al~~LG~yeEA 518 (614)
.....+|...+..|+|..|...++.++..+|+ +..|..-++.+|.++|.-.++
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~---~~~a~~l~a~~~~~l~~~~~~ 502 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPD---NRAARELQADALEQLGYQAEN 502 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC---cHHHHHHHHHHHHHHHHhccC
Confidence 34667888999999999999999999999999 999999999999999855544
No 324
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=21.50 E-value=79 Score=34.85 Aligned_cols=30 Identities=20% Similarity=0.040 Sum_probs=20.9
Q ss_pred CchHHHHHhcccchhhHHHHHHHHhhhhhhc
Q 047433 135 VIPPLMELLRGKISWVEQRVAVRALGHLASY 165 (614)
Q Consensus 135 ~~~~l~~~~~~~~~wve~r~~~r~l~h~a~~ 165 (614)
++++|..+|...=. -=+.+|+++|+.++..
T Consensus 314 a~~~L~~~L~~~d~-~vr~~aL~~L~~i~~~ 343 (618)
T 1w63_A 314 AINILGRFLLNNDK-NIRYVALTSLLKTVQT 343 (618)
T ss_dssp HHHHHHHHHTCSST-TTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCC-chHHHHHHHHHHHHhh
Confidence 45677777775443 2367888888888865
No 325
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=21.26 E-value=1.8e+02 Score=30.81 Aligned_cols=51 Identities=12% Similarity=0.036 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhhCCCC---CcchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHh
Q 047433 440 EEAAMKYTEALGVCPSR---PKNERMVLYSNRAQCHLLLREPDAAISDATRALC 490 (614)
Q Consensus 440 eeAI~~YtkAIel~P~~---~~~~~a~lysNRA~~ylkLGdyeeAI~D~~~ALe 490 (614)
+..+..++.|+..-|.. .+-.+..++.-+|.+|+-+|+|++|+..++.+|.
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 33444445555554432 2345677888999999999999999999999985
Done!