BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047445
(436 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 332 bits (852), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/412 (43%), Positives = 249/412 (60%), Gaps = 20/412 (4%)
Query: 7 KSSRPHVAVLASPGLGHVVPLLEFAKRLVINHGVHVRFLVITTNEASAAQEKLLRSXXXX 66
+S PHVA++ SPG+GH++PL+EFAKRLV HG+ V F++ S AQ +L S
Sbjct: 3 ESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSS 62
Query: 67 XXXXXXXXXXXSAVTRDDMPVITRLHAIVDESLKSS---LKAVLIELCN----PRALVID 119
V D+ TR+ + + ++ S L+ V P ALV+D
Sbjct: 63 ISSVFL-----PPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVD 117
Query: 120 LFCTQAFEICSQLSIPTYSFVTTSIHFFAFALYLPTLDREVQGEFFDLPEPIEIPGCPPV 179
LF T AF++ + +P Y F T+ + +F L+LP LD V EF +L EP+ +PGC PV
Sbjct: 118 LFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPV 177
Query: 180 RPEDLLDQVRNRKIDEYNLFLLHISRLPLAAGIFLNPWENLELVPLRAIREHSFYLQIPT 239
+D LD ++RK D Y L + R A GI +N + LE ++A++E +
Sbjct: 178 AGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPG----LDK 233
Query: 240 PPIYPIGPL--IKQDETLSASDEECLAWLGKQPSDSVIFVAPGSGGTLTAEQVIEMAWGL 297
PP+YP+GPL I + E + ECL WL QP SV++V+ GSGGTLT EQ+ E+A GL
Sbjct: 234 PPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGL 293
Query: 298 EQSKQRFIWVVRMPSDASASATFFNVGSDVNDPQAYLPEGFLQRTHGMGMVVPSWAPQVE 357
S+QRF+WV+R PS A++++F+ S DP +LP GFL+RT G V+P WAPQ +
Sbjct: 294 ADSEQRFLWVIRSPS-GIANSSYFDSHSQ-TDPLTFLPPGFLERTKKRGFVIPFWAPQAQ 351
Query: 358 ILRHSSTGGFLSHCGWNSSLESICHGVPMIAWPLYAEQKMNAAMLTEETRGG 409
+L H STGGFL+HCGWNS+LES+ G+P+IAWPLYAEQKMNA +L+E+ R
Sbjct: 352 VLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAA 403
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 210/437 (48%), Gaps = 61/437 (13%)
Query: 16 LASPGLGHVVPLLEFAKRLVINHGVHVRFLVITTNE-----ASAAQEKLLRSXXXXXXXX 70
+ +PG+GH+ LEFAK L+ NH ++ V A + + +L S
Sbjct: 15 IPAPGIGHLASALEFAK-LLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLID 73
Query: 71 XXXXXX--XSAVTRDDMPVITRLHAIVDESLKSSLKAVLIELCNPRALVIDLFCTQAFEI 128
+ + ++T L +++ +K+++K +L LV+D FC ++
Sbjct: 74 LPEVEPPPQELLKSPEFYILTFLESLIPH-VKATIKTILSN--KVVGLVLDFFCVSMIDV 130
Query: 129 CSQLSIPTYSFVTTSIHFFAFALYLPTLDREVQGEFFDLP---EPIEIPGCPPVRPEDLL 185
++ IP+Y F+T+++ F + L L +R+++ F D + + IPG P ++L
Sbjct: 131 GNEFGIPSYLFLTSNVGFLSLMLSLK--NRQIEEVFDDSDRDHQLLNIPGISNQVPSNVL 188
Query: 186 DQVRNRKIDEYNLFLLHISRLPLAAGIFLNPWENLELVPLRAIREHSFYLQIPTPPIYPI 245
K Y + R GI +N + +LE + A+ +H + PPIY +
Sbjct: 189 PDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKI----PPIYAV 244
Query: 246 GPLI--------KQDETLSASDEECLAWLGKQPSDSVIFVAPGSGG-TLTAEQVIEMAWG 296
GPL+ K D+ A + L WL +QP SV+F+ GS G + Q+ E+A G
Sbjct: 245 GPLLDLKGQPNPKLDQ---AQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALG 301
Query: 297 LEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPQAYLPEGFLQ--RTHGMGMVVPSWAP 354
L+ S RF+W S+++ F PEGFL+ G GM+ WAP
Sbjct: 302 LKHSGVRFLW-----SNSAEKKVF--------------PEGFLEWMELEGKGMIC-GWAP 341
Query: 355 QVEILRHSSTGGFLSHCGWNSSLESICHGVPMIAWPLYAEQKMNAAMLTEETRGG----- 409
QVE+L H + GGF+SHCGWNS LES+ GVP++ WP+YAEQ++NA L +E G
Sbjct: 342 QVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRV 401
Query: 410 --RKASNRIGKESDRTG 424
RK S+ + E G
Sbjct: 402 DYRKGSDVVAAEEIEKG 418
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 210/437 (48%), Gaps = 61/437 (13%)
Query: 16 LASPGLGHVVPLLEFAKRLVINHGVHVRFLVITTNE-----ASAAQEKLLRSXXXXXXXX 70
+ +PG+GH+ LEFAK L+ NH ++ V A + + +L S
Sbjct: 15 IPAPGIGHLASALEFAK-LLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLID 73
Query: 71 XXXXXX--XSAVTRDDMPVITRLHAIVDESLKSSLKAVLIELCNPRALVIDLFCTQAFEI 128
+ + ++T L +++ +K+++K +L LV+D FC ++
Sbjct: 74 LPEVEPPPQELLKSPEFYILTFLESLIPH-VKATIKTILSN--KVVGLVLDFFCVSMIDV 130
Query: 129 CSQLSIPTYSFVTTSIHFFAFALYLPTLDREVQGEFFDLP---EPIEIPGCPPVRPEDLL 185
++ IP+Y F+T+++ F + L L +R+++ F D + + IPG P ++L
Sbjct: 131 GNEFGIPSYLFLTSNVGFLSLMLSLK--NRQIEEVFDDSDRDHQLLNIPGISNQVPSNVL 188
Query: 186 DQVRNRKIDEYNLFLLHISRLPLAAGIFLNPWENLELVPLRAIREHSFYLQIPTPPIYPI 245
K Y + R GI +N + +LE + A+ +H + PPIY +
Sbjct: 189 PDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKI----PPIYAV 244
Query: 246 GPLI--------KQDETLSASDEECLAWLGKQPSDSVIFVAPGSGG-TLTAEQVIEMAWG 296
GPL+ K D+ A + L WL +QP SV+F+ GS G + Q+ E+A G
Sbjct: 245 GPLLDLKGQPNPKLDQ---AQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALG 301
Query: 297 LEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPQAYLPEGFLQ--RTHGMGMVVPSWAP 354
L+ S RF+W S+++ F PEGFL+ G GM+ WAP
Sbjct: 302 LKHSGVRFLW-----SNSAEKKVF--------------PEGFLEWMELEGKGMIC-GWAP 341
Query: 355 QVEILRHSSTGGFLSHCGWNSSLESICHGVPMIAWPLYAEQKMNAAMLTEETRGG----- 409
QVE+L H + GGF+SHCGWNS LES+ GVP++ WP+YAEQ++NA L +E G
Sbjct: 342 QVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRV 401
Query: 410 --RKASNRIGKESDRTG 424
RK S+ + E G
Sbjct: 402 DYRKGSDVVAAEEIEKG 418
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 191/455 (41%), Gaps = 76/455 (16%)
Query: 8 SSRPHVAVLASPGLGHVVPLLEFAKRLVINHGVHVRFLVITTNEASAAQEKLLRSXXXXX 67
+ +PHV ++ P GH+ PL + AK L + G H+ F+ N + + ++
Sbjct: 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHL-RGFHITFVNTEYNHKRLLKSRGPKAFDGFT 64
Query: 68 XXXXXXXXXXSAVTRDDMPVITRLHAIVDESLKSSLK---AVLIELCNPR------ALVI 118
D V + + K+ LK +L L + LV
Sbjct: 65 DFNFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVS 124
Query: 119 DLFCTQAFEI------------------CSQLSIPTY-SFVTTSIHFFAFALYLPTLDRE 159
D C +F I CS L++ + SFV I F YL E
Sbjct: 125 D--CCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLE 182
Query: 160 VQGEFFDLPEPIEIPGCPPVRPEDLLDQVRNRKIDEYNL-FLLHIS-RLPLAAGIFLNPW 217
+ ++ IPG R +D++D +R ++ L F + ++ R+ I LN +
Sbjct: 183 TKVDW--------IPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTF 234
Query: 218 ENLELVPLRAIREHSFYLQIPTPPIYPIGPL---IKQ----------DETLSASDEECLA 264
LE + A L P IYPIGPL +KQ D L D ECL
Sbjct: 235 NELESDVINA-------LSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLD 287
Query: 265 WLGKQPSDSVIFVAPGSGGTLTAEQVIEMAWGLEQSKQRFIWVVRMPSDASASATFFNVG 324
WL + SV++V GS +T EQ++E AWGL K+ F+W++R P + F+
Sbjct: 288 WLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIR-PDLVIGGSVIFS-- 344
Query: 325 SDVNDPQAYLPEGFLQRTHGMGMVVPSWAPQVEILRHSSTGGFLSHCGWNSSLESICHGV 384
F G++ SW PQ ++L H S GGFL+HCGWNS+ ESIC GV
Sbjct: 345 -----------SEFTNEIADRGLIA-SWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGV 392
Query: 385 PMIAWPLYAEQKMNAAMLTEETRGGRKASNRIGKE 419
PM+ WP +A+Q + + E G + + +E
Sbjct: 393 PMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKRE 427
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 189/420 (45%), Gaps = 63/420 (15%)
Query: 8 SSRPHVAVLASPGLGHVVPLLEFAKRLVINHGVHVRFLVITTNEASAAQEKLLRSXXXXX 67
++ PHVAVLA P H PLL +RL H F +T++++A+ +
Sbjct: 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAP-HAVFSFFSTSQSNAS---IFHDSMHTM 60
Query: 68 XXXXXXXXXXSAVT---------RDDMPVITRLHAIVDESLKSSLKAVLIELCNP-RALV 117
V ++D+ + TR ES + + + E P LV
Sbjct: 61 QCNIKSYDISDGVPEGYVFAGRPQEDIELFTR---AAPESFRQGMVMAVAETGRPVSCLV 117
Query: 118 IDLFCTQAFEICSQLSIPTYSFVTTSIHFFAFALYLPTLDREV-----QGEFFDLPEPIE 172
D F A ++ +++ + F T + + +Y+ + ++ QG +L
Sbjct: 118 ADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLN--F 175
Query: 173 IPGCPPVRPEDLLDQVRNRKIDEYNLFLLHI--SRLPLAAGIFLNPWENLELVPLRAIRE 230
IPG VR DL + + ++ +LH LP A +F+N +E L+ ++
Sbjct: 176 IPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKS 235
Query: 231 H-SFYLQIP-----TPPIYPIGPLIKQDETLSASDEECLAWLGKQPSDSVIFVAPGSGGT 284
YL I TPP P+ P + CL WL ++ SV++++ G+ T
Sbjct: 236 KLKTYLNIGPFNLITPP--PVVP----------NTTGCLQWLKERKPTSVVYISFGTVTT 283
Query: 285 LTAEQVIEMAWGLEQSKQRFIWVVRMPSDASASATFFNVGSDVNDPQAYLPEGFLQRTHG 344
+V+ ++ LE S+ FIW +R + + +LPEGFL++T G
Sbjct: 284 PPPAEVVALSEALEASRVPFIWSLR------------------DKARVHLPEGFLEKTRG 325
Query: 345 MGMVVPSWAPQVEILRHSSTGGFLSHCGWNSSLESICHGVPMIAWPLYAEQKMNAAMLTE 404
GMVVP WAPQ E+L H + G F++HCGWNS ES+ GVP+I P + +Q++N M+ +
Sbjct: 326 YGMVVP-WAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVED 384
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 175/403 (43%), Gaps = 42/403 (10%)
Query: 12 HVAVLASPGLGHVVPLLEFAKRLVIN--HGVHVRFLVITTNEA--SAAQEKLLRSXXXXX 67
HVAVLA P H PLL K++ F TTN+ S + E L
Sbjct: 15 HVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNV 74
Query: 68 XXXXXXXXXXSAVTRDDMPVITRLHAIVDESLKSSLKAVLIELC-NPRALVIDLFCTQAF 126
S R+ P+ + A+ E+ K + + E N LV D F
Sbjct: 75 HDGLPKGYVSSGNPRE--PIFLFIKAM-QENFKHVIDEAVAETGKNITCLVTDAFFWFGA 131
Query: 127 EICSQLSIPTYSFVTTSIHFFAFALYLPTLDREVQG--EFFDLPEPIEIPGCPPVRPEDL 184
++ ++ T H +Y L RE G E D+ +PG P ++ DL
Sbjct: 132 DLAEEMHAKWVPLWTAGPHSLLTHVYT-DLIREKTGSKEVHDVKSIDVLPGFPELKASDL 190
Query: 185 LDQVRNRKIDEYNLFLLHIS--RLPLAAGIFLNPWENLELVPLRAIREHSFYLQIPTPPI 242
+ V + ID +LH LP A + +N + + PL +S + +
Sbjct: 191 PEGVI-KDIDVPFATMLHKMGLELPRANAVAINSFATIH--PLIENELNSKF-----KLL 242
Query: 243 YPIGPLIKQDETLSASDEE-CLAWLGKQPSDSVIFVAPGSGGTLTAEQVIEMAWGLEQSK 301
+GP SDE CL WL + + SV++++ GS T ++ +A LE+
Sbjct: 243 LNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECG 302
Query: 302 QRFIWVVRMPSDASASATFFNVGSDVNDPQAYLPEGFLQRTHGMGMVVPSWAPQVEILRH 361
FIW R DP+ LP+GFL+RT G +V +WAPQVEIL+H
Sbjct: 303 FPFIWSFR------------------GDPKEKLPKGFLERTKTKGKIV-AWAPQVEILKH 343
Query: 362 SSTGGFLSHCGWNSSLESICHGVPMIAWPLYAEQKMNAAMLTE 404
SS G FL+H GWNS LE I GVPMI+ P + +Q +N +LTE
Sbjct: 344 SSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLN-TILTE 385
>pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
pdb|2O6L|B Chain B, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
Length = 170
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 332 AYLPEGFLQR-------THGMGMVVPSWAPQVEILRHSSTGGFLSHCGWNSSLESICHGV 384
A +P+ L R T G+ + W PQ ++L H T F++H G N E+I HG+
Sbjct: 48 AQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGI 107
Query: 385 PMIAWPLYAEQKMNAA 400
P + PL+A+Q N A
Sbjct: 108 PXVGIPLFADQPDNIA 123
>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 424
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 349 VPSWAPQVEILRHSSTGGFLSHCGWNSSLESICHGVPMIAWPLYAEQKMNAAMLTEETRG 408
V W PQ++IL +S F++H G S++E++ + VPM+A P AEQ MNA + E G
Sbjct: 309 VHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLG 366
Query: 409 GRKASNRIGKESDR 422
+++ E R
Sbjct: 367 RHIPRDQVTAEKLR 380
>pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYF|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 430
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 349 VPSWAPQVEILRHSSTGGFLSHCGWNSSLESICHGVPMIAWPLYAEQKMNAAML 402
V W PQ+ ILR + F++H G S E + PMIA P +Q NA ML
Sbjct: 287 VHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADML 338
>pdb|3OTG|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp Bound Form
pdb|3OTH|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
pdb|3OTH|B Chain B, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
Length = 412
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 351 SWAPQVEILRHSSTGGFLSHCGWNSSLESICHGVPMIAWP 390
SW PQ +L H + H G ++L ++ GVP +++P
Sbjct: 298 SWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFP 335
>pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin
Length = 632
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 359 LRHSSTGGFLSHCGWNSSLESICHGVPMIAWPLYAEQKMNAAMLTEETR 407
L HS +G +++C WN H W +Y E+++ A+ E TR
Sbjct: 303 LAHSWSGNLVTNCSWN-------HFWLNEGWTVYLERRIIGAIHGEPTR 344
>pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From
Saccharomyces Cerevisiae
pdb|2XPZ|A Chain A, Structure Of Native Yeast Lta4 Hydrolase
Length = 632
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 359 LRHSSTGGFLSHCGWNSSLESICHGVPMIAWPLYAEQKMNAAMLTEETR 407
L HS +G +++C WN H W +Y E+++ A+ E TR
Sbjct: 303 LAHSWSGNLVTNCSWN-------HFWLNEGWTVYLERRIIGAIHGEPTR 344
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,261,996
Number of Sequences: 62578
Number of extensions: 491297
Number of successful extensions: 1079
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1044
Number of HSP's gapped (non-prelim): 18
length of query: 436
length of database: 14,973,337
effective HSP length: 102
effective length of query: 334
effective length of database: 8,590,381
effective search space: 2869187254
effective search space used: 2869187254
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)