BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047448
         (249 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3L39|A Chain A, Crystal Structure Of Putative Phou-Like Phosphate
           Regulatory Protein (Bt4638) From Bacteroides
           Thetaiotaomicron Vpi-5482 At 1.93 A Resolution
          Length = 227

 Score = 29.6 bits (65), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 52  EMLTANPKRARLF----HDKSLASEDTYEPFLSNWFIQEKSC 89
           E    NPK  R +    HD    ++D YE F++  F +EK C
Sbjct: 151 ETFRKNPKPLRDYCTQLHDIENQADDVYELFITKLFEEEKDC 192


>pdb|2VYA|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Conjugated
           With The Drug-Like Inhibitor Pf-750
 pdb|2VYA|B Chain B, Crystal Structure Of Fatty Acid Amide Hydrolase Conjugated
           With The Drug-Like Inhibitor Pf-750
          Length = 587

 Score = 29.6 bits (65), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 114 GIFCYIQLLILKKPSHPSRGVPVAINCLAALLKEPMVRSSFVQADGVKLLTPLISPA 170
           G F  I  +ILKK    S G+PVA+ C+A   +E +      + +  +L+TP   P+
Sbjct: 533 GYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVE--QLMTPQKQPS 587


>pdb|3QK5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase With Small
           Molecule Inhibitor
 pdb|3QK5|B Chain B, Crystal Structure Of Fatty Acid Amide Hydrolase With Small
           Molecule Inhibitor
 pdb|3QJ8|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|3QJ8|B Chain B, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|3QJ9|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase With Small
           Molecule Inhibitor
 pdb|3QJ9|B Chain B, Crystal Structure Of Fatty Acid Amide Hydrolase With Small
           Molecule Inhibitor
 pdb|3QKV|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase With Small
           Molecule Compound
 pdb|3QKV|B Chain B, Crystal Structure Of Fatty Acid Amide Hydrolase With Small
           Molecule Compound
          Length = 587

 Score = 29.3 bits (64), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 114 GIFCYIQLLILKKPSHPSRGVPVAINCLAALLKEPMVRSSFVQADGVKLLTPLISPA 170
           G F  I  +ILKK    S G+PVA+ C+A   +E +      + +  +L+TP   P+
Sbjct: 533 GYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVE--QLMTPQKQPS 587


>pdb|4HBP|A Chain A, Crystal Structure Of Faah In Complex With Inhibitor
 pdb|4HBP|B Chain B, Crystal Structure Of Faah In Complex With Inhibitor
          Length = 550

 Score = 29.3 bits (64), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 114 GIFCYIQLLILKKPSHPSRGVPVAINCLAALLKEPMVRSSFVQADGVKLLTPLISPA 170
           G F  I  +ILKK    S G+PVA+ C+A   +E +      + +  +L+TP   P+
Sbjct: 496 GYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVE--QLMTPQKQPS 550


>pdb|2WJ1|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide
           Hydrolase (Faah) Conjugated With
           7-Phenyl-1-(4-(Pyridin-2- Yl)oxazol-2-Yl)heptan-1-One,
           An Alpha-Ketooxazole
 pdb|2WJ1|B Chain B, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide
           Hydrolase (Faah) Conjugated With
           7-Phenyl-1-(4-(Pyridin-2- Yl)oxazol-2-Yl)heptan-1-One,
           An Alpha-Ketooxazole
 pdb|2WJ2|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide
           Hydrolase (Faah) Conjugated With
           7-Phenyl-1-(5-(Pyridin-2- Yl)oxazol-2-Yl)heptan-1-One,
           An Alpha-Ketooxazole
 pdb|2WJ2|B Chain B, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide
           Hydrolase (Faah) Conjugated With
           7-Phenyl-1-(5-(Pyridin-2- Yl)oxazol-2-Yl)heptan-1-One,
           An Alpha-Ketooxazole
 pdb|3K7F|A Chain A, Crystal Structure Analysis Of A
           PhenhexylOXAZOLECARBOXYPYRIDINE ALPHA-Ketoheterocycle
           Inhibitor Bound To A Humanized Variant Of Fatty Acid
           Amide Hydrolase'
 pdb|3K7F|B Chain B, Crystal Structure Analysis Of A
           PhenhexylOXAZOLECARBOXYPYRIDINE ALPHA-Ketoheterocycle
           Inhibitor Bound To A Humanized Variant Of Fatty Acid
           Amide Hydrolase'
 pdb|3K83|A Chain A, Crystal Structure Analysis Of A
           BiphenylOXAZOLECARBOXYPYRIDINE ALPHA-Ketoheterocycle
           Inhibitor Bound To A Humanized Variant Of Fatty Acid
           Amide Hydrolase
 pdb|3K83|B Chain B, Crystal Structure Analysis Of A
           BiphenylOXAZOLECARBOXYPYRIDINE ALPHA-Ketoheterocycle
           Inhibitor Bound To A Humanized Variant Of Fatty Acid
           Amide Hydrolase
 pdb|3K84|A Chain A, Crystal Structure Analysis Of A OleylOXADIAZOLEPYRIDINE
           Inhibitor Bound To A Humanized Variant Of Fatty Acid
           Amide Hydrolase
 pdb|3K84|B Chain B, Crystal Structure Analysis Of A OleylOXADIAZOLEPYRIDINE
           Inhibitor Bound To A Humanized Variant Of Fatty Acid
           Amide Hydrolase
 pdb|3LJ6|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide
           Hydrolase (Faah) Conjugated With The Drug-Like Urea
           Inhibitor Pf-3845 At 2.42a Resolution
 pdb|3LJ6|B Chain B, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide
           Hydrolase (Faah) Conjugated With The Drug-Like Urea
           Inhibitor Pf-3845 At 2.42a Resolution
 pdb|3LJ7|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide
           Hydrolase (Faah) Conjugated With Carbamate Inhibitor
           Urb597
 pdb|3LJ7|B Chain B, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide
           Hydrolase (Faah) Conjugated With Carbamate Inhibitor
           Urb597
 pdb|3OJ8|A Chain A, Alpha-Ketoheterocycle Inhibitors Of Fatty Acid Amide
           Hydrolase Containing Additional Conformational
           Contraints In The Acyl Side Chain
 pdb|3OJ8|B Chain B, Alpha-Ketoheterocycle Inhibitors Of Fatty Acid Amide
           Hydrolase Containing Additional Conformational
           Contraints In The Acyl Side Chain
 pdb|3PPM|A Chain A, Crystal Structure Of A Noncovalently Bound
           Alpha-Ketoheterocycle Inhibitor
           (PhenhexylOXADIAZOLEPYRIDINE) TO A HUMANIZED VARIANT OF
           Fatty Acid Amide Hydrolase
 pdb|3PPM|B Chain B, Crystal Structure Of A Noncovalently Bound
           Alpha-Ketoheterocycle Inhibitor
           (PhenhexylOXADIAZOLEPYRIDINE) TO A HUMANIZED VARIANT OF
           Fatty Acid Amide Hydrolase
 pdb|3PR0|A Chain A, Crystal Structure Of A Covalently Bound
           Alpha-Ketoheterocycle Inhibitor
           (PhenhexylOXADIAZOLEPYRIDINE) TO A HUMANIZED VARIANT OF
           Fatty Acid Amide Hydrolase
 pdb|3PR0|B Chain B, Crystal Structure Of A Covalently Bound
           Alpha-Ketoheterocycle Inhibitor
           (PhenhexylOXADIAZOLEPYRIDINE) TO A HUMANIZED VARIANT OF
           Fatty Acid Amide Hydrolase
          Length = 573

 Score = 28.9 bits (63), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 114 GIFCYIQLLILKKPSHPSRGVPVAINCLAALLKEPMVRSSFVQADGVKLLTPLISPA 170
           G F  I  +ILKK    S G+PVA+ C+A   +E +      + +  +L+TP   P+
Sbjct: 519 GYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVE--QLMTPQKQPS 573


>pdb|2WAP|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide
           Hydrolase (Faah) Conjugated With The Drug-Like Urea
           Inhibitor Pf-3845
 pdb|2WAP|B Chain B, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide
           Hydrolase (Faah) Conjugated With The Drug-Like Urea
           Inhibitor Pf-3845
          Length = 543

 Score = 28.9 bits (63), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 114 GIFCYIQLLILKKPSHPSRGVPVAINCLAALLKE 147
           G F  I  +ILKK    S G+PVA+ C+A   +E
Sbjct: 495 GYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQE 528


>pdb|1MT5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|B Chain B, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|C Chain C, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|D Chain D, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|E Chain E, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|F Chain F, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|G Chain G, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|H Chain H, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|I Chain I, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|J Chain J, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|K Chain K, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|L Chain L, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|M Chain M, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|N Chain N, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|O Chain O, Crystal Structure Of Fatty Acid Amide Hydrolase
 pdb|1MT5|P Chain P, Crystal Structure Of Fatty Acid Amide Hydrolase
          Length = 537

 Score = 28.5 bits (62), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 114 GIFCYIQLLILKKPSHPSRGVPVAINCLAALLKE 147
           G F  I  +ILKK    S G+PVA+ C+A   +E
Sbjct: 489 GYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQE 522


>pdb|4DO3|A Chain A, Structure Of Faah With A Non-steroidal Anti-inflammatory
           Drug
 pdb|4DO3|B Chain B, Structure Of Faah With A Non-steroidal Anti-inflammatory
           Drug
          Length = 571

 Score = 28.5 bits (62), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 114 GIFCYIQLLILKKPSHPSRGVPVAINCLAALLKE 147
           G F  I  +ILKK    S G+PVA+ C+A   +E
Sbjct: 515 GYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQE 548


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.324    0.136    0.393 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,450,747
Number of Sequences: 62578
Number of extensions: 231604
Number of successful extensions: 868
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 860
Number of HSP's gapped (non-prelim): 16
length of query: 249
length of database: 14,973,337
effective HSP length: 96
effective length of query: 153
effective length of database: 8,965,849
effective search space: 1371774897
effective search space used: 1371774897
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)