Query 047454
Match_columns 339
No_of_seqs 280 out of 2381
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 11:13:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047454.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047454hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13962 PGG: Domain of unknow 99.9 3.1E-25 6.7E-30 177.0 12.7 108 179-292 1-113 (113)
2 KOG4412 26S proteasome regulat 99.8 4.4E-19 9.5E-24 147.4 7.5 103 19-125 49-152 (226)
3 KOG4412 26S proteasome regulat 99.7 7.6E-17 1.7E-21 134.1 9.3 100 22-125 86-185 (226)
4 KOG0509 Ankyrin repeat and DHH 99.7 4.3E-15 9.2E-20 144.5 17.7 149 17-170 83-255 (600)
5 KOG0512 Fetal globin-inducing 99.6 2.5E-15 5.5E-20 124.3 10.2 129 22-170 77-208 (228)
6 PHA02741 hypothetical protein; 99.6 7.6E-15 1.6E-19 125.5 10.2 113 39-171 18-143 (169)
7 KOG0509 Ankyrin repeat and DHH 99.5 1.7E-14 3.7E-19 140.3 9.2 108 11-125 50-158 (600)
8 PHA02946 ankyin-like protein; 99.5 4.1E-14 8.9E-19 138.9 11.3 91 22-117 53-146 (446)
9 PHA02859 ankyrin repeat protei 99.5 8.3E-14 1.8E-18 123.2 10.5 79 39-121 48-132 (209)
10 KOG0195 Integrin-linked kinase 99.5 4.6E-14 1E-18 125.4 8.5 113 36-169 28-142 (448)
11 KOG0510 Ankyrin repeat protein 99.5 3.8E-14 8.3E-19 140.7 8.7 101 24-125 289-390 (929)
12 PHA02791 ankyrin-like protein; 99.5 1.3E-13 2.9E-18 127.1 10.7 98 19-125 10-107 (284)
13 PHA02791 ankyrin-like protein; 99.5 1.5E-13 3.2E-18 126.8 11.0 97 22-125 44-141 (284)
14 PHA02874 ankyrin repeat protei 99.5 1.1E-13 2.3E-18 135.7 10.5 100 21-125 104-203 (434)
15 PHA02874 ankyrin repeat protei 99.5 1.7E-13 3.6E-18 134.3 11.3 126 21-169 137-263 (434)
16 PHA02743 Viral ankyrin protein 99.5 1.9E-13 4.1E-18 116.5 10.0 99 22-125 38-141 (166)
17 PHA02875 ankyrin repeat protei 99.5 1.6E-13 3.5E-18 133.4 10.8 59 39-98 32-90 (413)
18 PHA02878 ankyrin repeat protei 99.5 1.7E-13 3.7E-18 135.9 10.6 97 22-123 148-245 (477)
19 PHA02884 ankyrin repeat protei 99.5 2.5E-13 5.5E-18 125.6 10.8 102 21-125 46-150 (300)
20 PHA02741 hypothetical protein; 99.4 5.7E-13 1.2E-17 113.9 10.6 89 33-125 51-145 (169)
21 KOG0508 Ankyrin repeat protein 99.4 1.5E-13 3.2E-18 129.4 6.9 100 21-125 97-196 (615)
22 KOG0510 Ankyrin repeat protein 99.4 2.1E-13 4.5E-18 135.6 8.2 85 39-126 270-355 (929)
23 PHA02736 Viral ankyrin protein 99.4 1.9E-13 4.1E-18 114.9 6.0 112 39-170 14-136 (154)
24 PHA02875 ankyrin repeat protei 99.4 7.6E-13 1.7E-17 128.6 10.7 83 39-125 99-181 (413)
25 PHA02743 Viral ankyrin protein 99.4 3.4E-13 7.4E-18 114.9 7.2 118 32-170 10-138 (166)
26 PLN03192 Voltage-dependent pot 99.4 1E-12 2.2E-17 138.3 11.7 76 22-99 539-614 (823)
27 PHA03100 ankyrin repeat protei 99.4 1E-12 2.2E-17 130.1 10.7 78 20-100 120-200 (480)
28 PHA02878 ankyrin repeat protei 99.4 9.1E-13 2E-17 130.6 9.7 125 21-169 181-309 (477)
29 KOG0508 Ankyrin repeat protein 99.4 4.6E-13 9.9E-18 126.1 6.5 101 21-127 130-230 (615)
30 PHA03095 ankyrin-like protein; 99.4 1.9E-12 4.1E-17 127.8 10.5 101 17-122 23-127 (471)
31 KOG4177 Ankyrin [Cell wall/mem 99.4 1.8E-12 3.8E-17 135.7 9.8 92 32-127 530-621 (1143)
32 PHA02989 ankyrin repeat protei 99.4 2.9E-12 6.4E-17 127.6 10.5 99 20-123 87-192 (494)
33 PF12796 Ank_2: Ankyrin repeat 99.3 2.8E-12 6.2E-17 97.3 7.5 72 46-125 1-72 (89)
34 PHA02859 ankyrin repeat protei 99.3 6.2E-12 1.3E-16 111.2 10.4 101 20-125 65-172 (209)
35 PHA02798 ankyrin-like protein; 99.3 4.9E-12 1.1E-16 125.8 10.6 99 20-123 88-193 (489)
36 PHA02736 Viral ankyrin protein 99.3 1.5E-12 3.3E-17 109.4 5.7 84 38-125 51-139 (154)
37 PHA03095 ankyrin-like protein; 99.3 5.1E-12 1.1E-16 124.8 10.3 100 21-125 202-303 (471)
38 PHA02716 CPXV016; CPX019; EVM0 99.3 5.6E-12 1.2E-16 129.1 10.3 98 21-123 192-328 (764)
39 TIGR00870 trp transient-recept 99.3 6.8E-11 1.5E-15 123.5 18.6 82 40-124 126-220 (743)
40 PHA02876 ankyrin repeat protei 99.3 8.1E-12 1.7E-16 129.2 11.4 104 20-125 157-286 (682)
41 PHA02876 ankyrin repeat protei 99.3 7.4E-12 1.6E-16 129.5 10.7 81 39-123 338-419 (682)
42 PF13637 Ank_4: Ankyrin repeat 99.3 5E-12 1.1E-16 86.9 6.3 54 42-96 1-54 (54)
43 PHA03100 ankyrin repeat protei 99.3 8.5E-12 1.8E-16 123.5 9.8 98 21-123 48-152 (480)
44 KOG0514 Ankyrin repeat protein 99.3 1.2E-12 2.7E-17 119.7 2.9 111 39-169 265-416 (452)
45 PHA02798 ankyrin-like protein; 99.3 1.4E-11 3.1E-16 122.5 9.7 100 20-124 50-157 (489)
46 PHA02884 ankyrin repeat protei 99.3 1.4E-11 3E-16 114.1 8.9 112 38-169 28-146 (300)
47 PLN03192 Voltage-dependent pot 99.3 1.8E-11 3.9E-16 129.0 10.8 84 39-126 522-605 (823)
48 PHA02989 ankyrin repeat protei 99.3 1.7E-11 3.6E-16 122.2 10.0 79 20-99 123-208 (494)
49 PF13857 Ank_5: Ankyrin repeat 99.3 4.6E-12 1E-16 87.8 3.9 56 61-119 1-56 (56)
50 PF12796 Ank_2: Ankyrin repeat 99.3 3.3E-11 7.2E-16 91.4 8.9 74 21-101 10-84 (89)
51 PHA02795 ankyrin-like protein; 99.2 2.5E-11 5.5E-16 116.9 9.5 100 21-124 162-266 (437)
52 KOG0505 Myosin phosphatase, re 99.2 3E-11 6.5E-16 115.7 9.5 126 22-169 87-273 (527)
53 PHA02795 ankyrin-like protein; 99.2 2.9E-11 6.2E-16 116.6 9.5 129 19-171 129-265 (437)
54 PHA02946 ankyin-like protein; 99.2 3E-11 6.6E-16 118.6 9.7 81 39-124 170-254 (446)
55 KOG3676 Ca2+-permeable cation 99.2 1.9E-09 4.1E-14 108.1 21.6 81 39-122 181-283 (782)
56 PHA02716 CPXV016; CPX019; EVM0 99.2 5E-11 1.1E-15 122.2 10.2 96 22-121 156-256 (764)
57 PHA02917 ankyrin-like protein; 99.2 7.2E-11 1.6E-15 120.9 9.9 100 21-125 116-242 (661)
58 KOG0502 Integral membrane anky 99.2 1.4E-10 3E-15 99.8 9.0 119 35-174 153-273 (296)
59 PF13857 Ank_5: Ankyrin repeat 99.2 3.7E-11 8.1E-16 83.3 4.3 50 33-83 7-56 (56)
60 PHA02730 ankyrin-like protein; 99.2 2.4E-10 5.1E-15 115.4 11.7 100 20-125 358-475 (672)
61 KOG0514 Ankyrin repeat protein 99.1 2.8E-10 6.2E-15 104.4 8.2 101 21-125 320-420 (452)
62 PHA02730 ankyrin-like protein; 99.1 3.7E-10 8E-15 114.0 9.7 99 20-121 19-123 (672)
63 COG0666 Arp FOG: Ankyrin repea 99.1 5.1E-10 1.1E-14 97.9 9.4 99 23-125 88-193 (235)
64 cd00204 ANK ankyrin repeats; 99.0 9.7E-10 2.1E-14 87.1 8.7 82 39-124 4-85 (126)
65 KOG0195 Integrin-linked kinase 99.0 4.6E-10 1E-14 100.2 7.2 93 22-120 48-141 (448)
66 PHA02917 ankyrin-like protein; 99.0 8.9E-10 1.9E-14 112.9 10.4 98 23-124 377-498 (661)
67 KOG4177 Ankyrin [Cell wall/mem 99.0 4.7E-10 1E-14 117.9 7.5 92 32-126 464-587 (1143)
68 KOG0502 Integral membrane anky 99.0 4.8E-10 1E-14 96.5 5.6 106 11-124 166-271 (296)
69 PHA02792 ankyrin-like protein; 99.0 7.8E-10 1.7E-14 110.7 7.1 100 21-124 85-227 (631)
70 cd00204 ANK ankyrin repeats; 99.0 5.7E-09 1.2E-13 82.6 10.6 98 21-124 20-118 (126)
71 KOG0507 CASK-interacting adapt 99.0 3.7E-10 8E-15 112.1 3.8 110 39-169 46-157 (854)
72 PHA02792 ankyrin-like protein; 99.0 2.3E-09 4.9E-14 107.4 9.1 96 20-121 351-452 (631)
73 KOG4214 Myotrophin and similar 98.9 2.1E-09 4.5E-14 80.4 6.3 80 33-117 26-105 (117)
74 TIGR00870 trp transient-recept 98.9 1.2E-07 2.6E-12 99.2 21.5 105 21-126 141-271 (743)
75 PTZ00322 6-phosphofructo-2-kin 98.9 4.4E-09 9.5E-14 108.2 10.0 77 45-125 85-161 (664)
76 PF13637 Ank_4: Ankyrin repeat 98.9 1.6E-09 3.4E-14 74.4 4.4 47 76-125 1-47 (54)
77 KOG0512 Fetal globin-inducing 98.9 3.2E-09 7E-14 88.3 6.4 78 45-125 66-143 (228)
78 PTZ00322 6-phosphofructo-2-kin 98.9 1.1E-08 2.4E-13 105.2 11.1 98 22-121 96-197 (664)
79 KOG0507 CASK-interacting adapt 98.9 1.6E-09 3.4E-14 107.7 4.6 98 22-125 63-161 (854)
80 KOG0515 p53-interacting protei 98.9 4.8E-09 1E-13 100.3 7.2 60 39-99 580-639 (752)
81 COG0666 Arp FOG: Ankyrin repea 98.8 1.9E-08 4.1E-13 87.9 9.9 86 39-125 70-160 (235)
82 KOG1710 MYND Zn-finger and ank 98.8 1.3E-08 2.9E-13 90.9 6.5 91 35-128 38-128 (396)
83 KOG0515 p53-interacting protei 98.7 1.7E-08 3.7E-13 96.6 6.5 76 46-125 554-629 (752)
84 KOG4214 Myotrophin and similar 98.7 4.1E-08 8.9E-13 73.5 5.8 77 44-125 4-80 (117)
85 KOG0505 Myosin phosphatase, re 98.5 1.9E-07 4.2E-12 89.9 7.8 81 38-122 194-274 (527)
86 KOG3676 Ca2+-permeable cation 98.4 3.3E-07 7.1E-12 92.3 6.7 103 21-125 197-321 (782)
87 PF13606 Ank_3: Ankyrin repeat 98.4 5E-07 1.1E-11 54.0 3.5 27 41-67 1-27 (30)
88 KOG0506 Glutaminase (contains 98.3 4.5E-07 9.7E-12 86.1 3.6 84 39-125 503-586 (622)
89 KOG0782 Predicted diacylglycer 98.2 2.2E-06 4.7E-11 83.0 6.0 85 38-125 895-980 (1004)
90 PF13606 Ank_3: Ankyrin repeat 98.2 2.2E-06 4.7E-11 51.2 3.2 27 75-101 1-27 (30)
91 PF00023 Ank: Ankyrin repeat H 98.1 3.2E-06 6.9E-11 51.6 3.9 27 41-67 1-27 (33)
92 KOG0818 GTPase-activating prot 98.1 7.2E-06 1.6E-10 78.4 6.9 80 43-125 134-213 (669)
93 KOG0783 Uncharacterized conser 98.1 2.7E-06 5.9E-11 85.7 3.9 83 37-123 47-130 (1267)
94 PF00023 Ank: Ankyrin repeat H 98.0 5.8E-06 1.3E-10 50.4 3.6 27 75-101 1-27 (33)
95 KOG0522 Ankyrin repeat protein 98.0 1.1E-05 2.3E-10 78.1 6.6 77 46-125 24-101 (560)
96 KOG4369 RTK signaling protein 98.0 6.9E-06 1.5E-10 85.1 5.4 84 39-126 754-838 (2131)
97 KOG0705 GTPase-activating prot 98.0 1.6E-05 3.5E-10 77.4 7.5 61 39-100 658-718 (749)
98 KOG0522 Ankyrin repeat protein 98.0 1.7E-05 3.7E-10 76.7 7.0 64 34-98 47-110 (560)
99 KOG1710 MYND Zn-finger and ank 97.9 2.4E-05 5.3E-10 70.3 6.7 80 42-125 12-92 (396)
100 KOG0506 Glutaminase (contains 97.9 1E-05 2.2E-10 77.0 3.5 68 32-99 529-596 (622)
101 KOG0521 Putative GTPase activa 97.7 2.5E-05 5.4E-10 81.0 4.4 110 11-124 621-734 (785)
102 KOG0782 Predicted diacylglycer 97.7 5.8E-05 1.3E-09 73.4 5.7 76 47-125 871-947 (1004)
103 KOG2384 Major histocompatibili 97.7 0.0001 2.2E-09 62.7 6.3 87 34-121 4-90 (223)
104 KOG4369 RTK signaling protein 97.6 3.5E-05 7.7E-10 80.1 3.5 101 21-125 770-870 (2131)
105 KOG0520 Uncharacterized conser 97.5 7.4E-05 1.6E-09 77.6 3.5 87 38-125 604-693 (975)
106 KOG0818 GTPase-activating prot 97.5 0.00031 6.7E-09 67.5 6.9 65 32-97 156-221 (669)
107 KOG0705 GTPase-activating prot 97.3 0.00062 1.4E-08 66.6 7.7 114 5-125 591-707 (749)
108 KOG0783 Uncharacterized conser 97.0 0.00033 7E-09 71.2 1.8 72 53-127 28-101 (1267)
109 KOG0520 Uncharacterized conser 96.8 0.00081 1.8E-08 70.1 3.0 83 39-125 571-654 (975)
110 KOG0511 Ankyrin repeat protein 96.5 0.0045 9.7E-08 58.0 5.7 57 43-100 37-93 (516)
111 smart00248 ANK ankyrin repeats 96.5 0.0047 1E-07 34.5 3.6 27 41-67 1-27 (30)
112 KOG2384 Major histocompatibili 96.1 0.0078 1.7E-07 51.4 4.3 56 68-125 4-59 (223)
113 KOG3609 Receptor-activated Ca2 95.3 3.1 6.8E-05 43.4 19.9 77 24-100 41-155 (822)
114 KOG0521 Putative GTPase activa 95.0 0.016 3.5E-07 60.6 3.0 49 74-125 654-702 (785)
115 smart00248 ANK ankyrin repeats 94.9 0.033 7.2E-07 30.7 2.9 26 75-100 1-26 (30)
116 KOG2505 Ankyrin repeat protein 93.9 0.08 1.7E-06 51.5 4.5 45 39-84 427-471 (591)
117 KOG3609 Receptor-activated Ca2 92.9 0.066 1.4E-06 55.2 2.4 57 43-99 26-85 (822)
118 KOG0511 Ankyrin repeat protein 91.3 0.42 9.2E-06 45.2 5.6 65 21-88 49-113 (516)
119 KOG2505 Ankyrin repeat protein 89.1 0.53 1.2E-05 46.0 4.4 63 55-120 404-471 (591)
120 PF11929 DUF3447: Domain of un 79.8 3.8 8.3E-05 29.7 4.4 47 44-98 8-54 (76)
121 PF06570 DUF1129: Protein of u 78.7 17 0.00036 31.8 9.0 15 154-168 39-53 (206)
122 KOG4591 Uncharacterized conser 74.5 1.9 4.2E-05 37.3 1.8 52 72-123 218-271 (280)
123 COG4298 Uncharacterized protei 72.4 8 0.00017 28.6 4.2 51 226-295 14-64 (95)
124 PF03158 DUF249: Multigene fam 58.3 21 0.00047 30.7 4.9 45 46-97 147-191 (192)
125 PF06128 Shigella_OspC: Shigel 53.9 28 0.0006 31.1 5.0 78 22-100 193-278 (284)
126 KOG4591 Uncharacterized conser 47.4 13 0.00028 32.4 1.9 50 39-88 219-272 (280)
127 KOG4473 Uncharacterized membra 43.0 88 0.0019 27.7 6.3 81 194-289 163-244 (247)
128 cd02433 Nodulin-21_like_2 Nodu 42.7 2.5E+02 0.0054 25.1 10.1 21 269-289 211-231 (234)
129 KOG4112 Signal peptidase subun 42.1 53 0.0011 24.9 4.2 47 271-325 30-76 (101)
130 PF06645 SPC12: Microsomal sig 40.5 54 0.0012 23.8 4.1 44 274-325 18-61 (76)
131 KOG2887 Membrane protein invol 39.5 2.4E+02 0.0052 24.0 8.9 35 295-329 131-165 (175)
132 PF05313 Pox_P21: Poxvirus P21 35.6 1.8E+02 0.0039 24.9 6.9 22 274-295 91-112 (189)
133 PF12304 BCLP: Beta-casein lik 35.3 1.5E+02 0.0032 25.5 6.4 31 226-256 38-69 (188)
134 PF06128 Shigella_OspC: Shigel 34.3 77 0.0017 28.4 4.6 83 42-128 179-270 (284)
135 PF10966 DUF2768: Protein of u 33.2 58 0.0013 22.4 3.0 21 275-295 3-23 (58)
136 PRK09546 zntB zinc transporter 32.6 70 0.0015 30.0 4.6 20 272-291 266-285 (324)
137 PF07954 DUF1689: Protein of u 32.1 97 0.0021 25.8 4.8 61 168-229 8-74 (152)
138 PF07856 Orai-1: Mediator of C 31.9 3.2E+02 0.007 23.3 13.5 52 189-245 23-74 (175)
139 PF11023 DUF2614: Protein of u 30.2 1.2E+02 0.0026 23.9 4.6 36 268-310 13-48 (114)
140 TIGR00267 conserved hypothetic 29.5 3.5E+02 0.0075 22.8 10.2 77 190-288 88-167 (169)
141 TIGR00383 corA magnesium Mg(2+ 27.8 92 0.002 28.9 4.5 21 272-292 260-280 (318)
142 PF11137 DUF2909: Protein of u 27.2 2.2E+02 0.0049 19.9 7.4 58 226-289 2-59 (63)
143 COG4325 Predicted membrane pro 26.9 6E+02 0.013 24.8 10.0 30 183-212 32-61 (464)
144 COG0598 CorA Mg2+ and Co2+ tra 25.8 2.3E+02 0.005 26.5 6.8 21 272-292 264-284 (322)
145 PTZ00370 STEVOR; Provisional 24.4 73 0.0016 29.4 2.9 38 279-320 243-280 (296)
146 PF01988 VIT1: VIT family; In 23.9 2.6E+02 0.0055 24.5 6.4 78 189-289 130-212 (213)
147 PF04123 DUF373: Domain of unk 23.9 6.1E+02 0.013 24.2 9.1 43 252-294 200-249 (344)
148 PF01544 CorA: CorA-like Mg2+ 22.6 1.2E+02 0.0025 27.4 4.1 21 272-292 236-256 (292)
149 PF06123 CreD: Inner membrane 22.5 2.5E+02 0.0053 27.7 6.4 48 268-319 352-399 (430)
150 TIGR01569 A_tha_TIGR01569 plan 22.5 4.5E+02 0.0098 21.8 10.4 29 217-245 36-64 (154)
151 PF07344 Amastin: Amastin surf 22.0 2.1E+02 0.0046 23.7 5.1 34 267-300 62-96 (155)
152 TIGR01478 STEVOR variant surfa 21.5 89 0.0019 28.8 2.9 37 279-319 247-283 (295)
153 PF11286 DUF3087: Protein of u 21.2 5.1E+02 0.011 21.9 7.8 25 271-295 19-43 (165)
154 PLN02922 prenyltransferase 20.8 4.6E+02 0.01 24.5 7.7 27 179-205 16-42 (315)
155 cd02432 Nodulin-21_like_1 Nodu 20.5 6E+02 0.013 22.4 9.5 21 269-289 196-216 (218)
156 COG1814 Uncharacterized membra 20.1 3.5E+02 0.0076 24.0 6.5 56 227-289 164-223 (229)
No 1
>PF13962 PGG: Domain of unknown function
Probab=99.93 E-value=3.1e-25 Score=176.96 Aligned_cols=108 Identities=40% Similarity=0.688 Sum_probs=94.2
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHhhcCCCCCCC----CCcccccCcc-hhhhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 047454 179 EKWMKETATACSVVAAFIITVMFAAAFTVPGGNDS----RGIPNFLHES-SFIIFAVSDALSLFSSIISVLMFLGILTSR 253 (339)
Q Consensus 179 ~~~~~~~~~s~~vvA~LIATvtfaa~ft~Pgg~~~----~G~~~l~~~~-~f~~F~~~nt~a~~~S~~~~~~~~~~~~~~ 253 (339)
+||++++++++++||+|||||||||+++||||+++ .|+|++.+++ .|++|+++|++||++|+.+++++++.+
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~--- 77 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGL--- 77 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 47999999999999999999999999999999954 6999998877 999999999999999999998876322
Q ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 047454 254 YSEEDFLLSLPRKLIIDLITMFFSIASMMVSFGATIYLV 292 (339)
Q Consensus 254 ~~~~~~~~~l~~~l~~~~~~~~~s~~~m~~af~~~~~~v 292 (339)
.++.+..++.+.++..++++++.+|++||++|+|+|
T Consensus 78 ---~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 78 ---DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 334444455677889999999999999999999975
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=4.4e-19 Score=147.43 Aligned_cols=103 Identities=18% Similarity=0.129 Sum_probs=86.6
Q ss_pred HHHHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHH-CCCCcccccCCCchHhhHHHHcCChHHHHHHHc
Q 047454 19 QAVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAA-YKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYS 97 (339)
Q Consensus 19 ~a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~-~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~ 97 (339)
...+|+..|+++.+..+++.|..||||||+||..|+.++|+.|+.+ +++ .+..+..|+|+||+|+-+|+.++.++|++
T Consensus 49 g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~ad-vna~tn~G~T~LHyAagK~r~eIaqlLle 127 (226)
T KOG4412|consen 49 GHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGAD-VNATTNGGQTCLHYAAGKGRLEIAQLLLE 127 (226)
T ss_pred CchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCC-cceecCCCcceehhhhcCChhhHHHHHHh
Confidence 4568888888866666666689999999999999999999999988 555 46688899999999999999999999999
Q ss_pred ccCccccccccccCCCchHHHhhhcCCC
Q 047454 98 STFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 98 ~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++ .+..+|..|.||||-|+..|..
T Consensus 128 ~ga---~i~~kD~~~qtplHRAAavGkl 152 (226)
T KOG4412|consen 128 KGA---LIRIKDKQGQTPLHRAAAVGKL 152 (226)
T ss_pred cCC---CCcccccccCchhHHHHhccch
Confidence 885 4556699999999999999885
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=7.6e-17 Score=134.14 Aligned_cols=100 Identities=16% Similarity=0.068 Sum_probs=88.9
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
++|+.|+.+-+.|++.....|.||||+||.+|..++.+.|++.+ ..+..+|..|+||||-|+..|+.+++++|+..++
T Consensus 86 evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~g-a~i~~kD~~~qtplHRAAavGklkvie~Li~~~a- 163 (226)
T KOG4412|consen 86 EVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKG-ALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGA- 163 (226)
T ss_pred HHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcC-CCCcccccccCchhHHHHhccchhhHHHHHhcCC-
Confidence 78888888866666666899999999999999999999999987 5567799999999999999999999999999975
Q ss_pred cccccccccCCCchHHHhhhcCCC
Q 047454 102 SNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 102 ~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|..|+||||.|...|+.
T Consensus 164 --~~n~qDk~G~TpL~~al~e~~~ 185 (226)
T KOG4412|consen 164 --PLNTQDKYGFTPLHHALAEGHP 185 (226)
T ss_pred --CCCcccccCccHHHHHHhccCc
Confidence 5777899999999999777774
No 4
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.66 E-value=4.3e-15 Score=144.49 Aligned_cols=149 Identities=19% Similarity=0.141 Sum_probs=107.9
Q ss_pred hHHHH----HHHHHHHhccCCCCcccc-ccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHH
Q 047454 17 NMQAV----EIVRIICKGVIWNDPQNQ-QLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEV 91 (339)
Q Consensus 17 ~~~a~----~iv~~L~~~~~~~~~~~d-~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~i 91 (339)
|.+|+ +++++|+++. .|++..+ .-+.||||+||++|+..+|..|++++++. ..+|.+|.||||+|++.++.-.
T Consensus 83 HWAAiNNrl~v~r~li~~g-advn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdp-t~~D~~G~~~lHla~~~~~~~~ 160 (600)
T KOG0509|consen 83 HWAAINNRLDVARYLISHG-ADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADP-TLKDKQGLTPLHLAAQFGHTAL 160 (600)
T ss_pred eHHHHcCcHHHHHHHHHcC-CCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCC-ceecCCCCcHHHHHHHhCchHH
Confidence 77776 7899999986 3334333 56789999999999999999999998875 5699999999999999999999
Q ss_pred HHHHHcccCccccccccccCCCchHHHhhhcCCCCCcc-----hhhhhhhH------hhhHHHHHHh-----hcc--hhH
Q 047454 92 FNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPSSEVA-----GAALQMQR------KLEWFKAVEN-----LVH--PFL 153 (339)
Q Consensus 92 v~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~~~v~-----~~~l~~~~------~l~~~~~v~~-----~~~--~~~ 153 (339)
+-+++..+. ..+.+|++|.||||+|+.+|+...+. ++.+...+ -+.|.-.-.+ ++. ...
T Consensus 161 vayll~~~~---d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~ 237 (600)
T KOG0509|consen 161 VAYLLSKGA---DIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGAD 237 (600)
T ss_pred HHHHHHhcc---cCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCc
Confidence 999998874 35566999999999999999853210 11111111 2344321110 111 123
Q ss_pred HHhhc-CCCCcchhchHH
Q 047454 154 REAVN-NEQTPREVFTEE 170 (339)
Q Consensus 154 ~~~~n-~g~tp~dl~~~~ 170 (339)
.+..| +|+||.|+++++
T Consensus 238 ~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 238 LDKTNTNGKTPFDLAQER 255 (600)
T ss_pred ccccccCCCCHHHHHHHh
Confidence 45667 999999998776
No 5
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.62 E-value=2.5e-15 Score=124.27 Aligned_cols=129 Identities=16% Similarity=0.049 Sum_probs=97.9
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
..|+.|++...-..+.+|.+|.||||.|+.+||.+++++|+..+++. +.+...||||||-||+..+.+++.+|++.|+
T Consensus 77 ~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~-~a~T~~GWTPLhSAckWnN~~va~~LLqhga- 154 (228)
T KOG0512|consen 77 TEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANK-EAKTNEGWTPLHSACKWNNFEVAGRLLQHGA- 154 (228)
T ss_pred HHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCc-ccccccCccchhhhhcccchhHHHHHHhccC-
Confidence 45666666542224455999999999999999999999999887664 5578899999999999999999999999987
Q ss_pred cccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcchh--HHHhhc-CCCCcchhchHH
Q 047454 102 SNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVHPF--LREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 102 ~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~~~--~~~~~n-~g~tp~dl~~~~ 170 (339)
.++++.+...||||+|+...+... .++.++... ....+| .+.||.+++...
T Consensus 155 --DVnA~t~g~ltpLhlaa~~rn~r~----------------t~~~Ll~dryi~pg~~nn~eeta~~iARRT 208 (228)
T KOG0512|consen 155 --DVNAQTKGLLTPLHLAAGNRNSRD----------------TLELLLHDRYIHPGLKNNLEETAFDIARRT 208 (228)
T ss_pred --cccccccccchhhHHhhcccchHH----------------HHHHHhhccccChhhhcCccchHHHHHHHh
Confidence 477777888999999999887411 111111111 123456 899999997654
No 6
>PHA02741 hypothetical protein; Provisional
Probab=99.59 E-value=7.6e-15 Score=125.48 Aligned_cols=113 Identities=14% Similarity=0.159 Sum_probs=87.3
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHC-----CCCcccccCCCchHhhHHHHcCC----hHHHHHHHcccCccccccccc
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAY-----KGSVYWEDENKHTIFHVAVLHRR----AEVFNLIYSSTFKSNWLGSND 109 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~-----p~~~~~~d~~G~t~LH~A~~~~~----~~iv~~Ll~~~~~~~~~~~~D 109 (339)
|.+|.||||+|++.|+.++++.|+... +..++.+|..|+||||+|+.+++ .+++++|++.++ .++.+|
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~ga---din~~~ 94 (169)
T PHA02741 18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGA---DINAQE 94 (169)
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCC---CCCCCC
Confidence 778999999999999999999986532 23356789999999999999998 588999999875 356666
Q ss_pred c-CCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhc--chhHHHhhc-CCCCcchhchHHH
Q 047454 110 N-IRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLV--HPFLREAVN-NEQTPREVFTEEH 171 (339)
Q Consensus 110 ~-~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~--~~~~~~~~n-~g~tp~dl~~~~~ 171 (339)
. +|+||||+|+..++.+ .++.++ +....+..| +|.||++++....
T Consensus 95 ~~~g~TpLh~A~~~~~~~-----------------iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~ 143 (169)
T PHA02741 95 MLEGDTALHLAAHRRDHD-----------------LAEWLCCQPGIDLHFCNADNKSPFELAIDNE 143 (169)
T ss_pred cCCCCCHHHHHHHcCCHH-----------------HHHHHHhCCCCCCCcCCCCCCCHHHHHHHCC
Confidence 4 9999999999999841 222222 123345667 9999999876643
No 7
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.54 E-value=1.7e-14 Score=140.35 Aligned_cols=108 Identities=11% Similarity=-0.009 Sum_probs=87.8
Q ss_pred HHhhhhhHHHHHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCccccc-CCCchHhhHHHHcCCh
Q 047454 11 HKEKVRNMQAVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWED-ENKHTIFHVAVLHRRA 89 (339)
Q Consensus 11 ~~~~~~~~~a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d-~~G~t~LH~A~~~~~~ 89 (339)
++.+.++.+ -++.+++....+.++.|++|-|+||+||-+++.+++++|++++++... .+ .-|.||||+|+++|+.
T Consensus 50 ~A~q~G~l~---~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~-~gG~l~stPLHWAar~G~~ 125 (600)
T KOG0509|consen 50 KATQYGELE---TVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNA-IGGVLGSTPLHWAARNGHI 125 (600)
T ss_pred hHhhcchHH---HHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccc-cCCCCCCCcchHHHHcCcH
Confidence 445554443 345555553334444588999999999999999999999999887544 54 6789999999999999
Q ss_pred HHHHHHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 90 EVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 90 ~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|++.|++ ++.+|.+|.||||+|++.++.
T Consensus 126 ~vv~lLlqhGAd---pt~~D~~G~~~lHla~~~~~~ 158 (600)
T KOG0509|consen 126 SVVDLLLQHGAD---PTLKDKQGLTPLHLAAQFGHT 158 (600)
T ss_pred HHHHHHHHcCCC---CceecCCCCcHHHHHHHhCch
Confidence 999999999985 566799999999999999996
No 8
>PHA02946 ankyin-like protein; Provisional
Probab=99.53 E-value=4.1e-14 Score=138.87 Aligned_cols=91 Identities=12% Similarity=0.055 Sum_probs=72.3
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCC--hHHHHHHHccc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRR--AEVFNLIYSST 99 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~--~~iv~~Ll~~~ 99 (339)
++++.|++.+ .+++..|.+|+||||+|++.|+.++++.|++.+++. +.+|.+|+||||+|+..++ .+++++|++.|
T Consensus 53 ~iv~~Ll~~G-advn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdi-n~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~G 130 (446)
T PHA02946 53 RFVEELLHRG-YSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADP-NACDKQHKTPLYYLSGTDDEVIERINLLVQYG 130 (446)
T ss_pred HHHHHHHHCc-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence 6888888875 444455999999999999999999999999988765 5689999999999988764 68899999887
Q ss_pred Ccccccccc-ccCCCchHH
Q 047454 100 FKSNWLGSN-DNIRNNILH 117 (339)
Q Consensus 100 ~~~~~~~~~-D~~GnTpLH 117 (339)
++ ++.. |.+|.||||
T Consensus 131 ad---in~~~d~~g~tpL~ 146 (446)
T PHA02946 131 AK---INNSVDEEGCGPLL 146 (446)
T ss_pred CC---cccccCCCCCcHHH
Confidence 53 3332 555555555
No 9
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.51 E-value=8.3e-14 Score=123.18 Aligned_cols=79 Identities=14% Similarity=0.196 Sum_probs=43.2
Q ss_pred cccCCcHHHHHHHCC--cHHHHHHHHHHCCCCccccc-CCCchHhhHHHHc---CChHHHHHHHcccCccccccccccCC
Q 047454 39 QQLLKKAFFKAATLG--ISKFVQEIIAAYKGSVYWED-ENKHTIFHVAVLH---RRAEVFNLIYSSTFKSNWLGSNDNIR 112 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G--~~~iv~~Ll~~~p~~~~~~d-~~G~t~LH~A~~~---~~~~iv~~Ll~~~~~~~~~~~~D~~G 112 (339)
|..|.||||+|+.++ +.++++.|++.+++... +| ..|+||||+|+.. ++.+++++|++.|+ .++.+|.+|
T Consensus 48 ~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~-~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~ga---din~~d~~G 123 (209)
T PHA02859 48 NDLYETPIFSCLEKDKVNVEILKFLIENGADVNF-KTRDNNLSALHHYLSFNKNVEPEILKILIDSGS---SITEEDEDG 123 (209)
T ss_pred CccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCc-cCCCCCCCHHHHHHHhCccccHHHHHHHHHCCC---CCCCcCCCC
Confidence 455666666665533 56666666665555422 33 3566666665542 24566666666554 234446666
Q ss_pred CchHHHhhh
Q 047454 113 NNILHFGGK 121 (339)
Q Consensus 113 nTpLHlA~~ 121 (339)
.||||+|+.
T Consensus 124 ~TpLh~a~~ 132 (209)
T PHA02859 124 KNLLHMYMC 132 (209)
T ss_pred CCHHHHHHH
Confidence 666666554
No 10
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.51 E-value=4.6e-14 Score=125.41 Aligned_cols=113 Identities=16% Similarity=0.117 Sum_probs=89.4
Q ss_pred ccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCch
Q 047454 36 PQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNI 115 (339)
Q Consensus 36 ~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTp 115 (339)
+.-|..|.+|||+||+.||..+++.|+.++.. ++..+.-..||||+|+.+|+.++|+.|++..+ .+++.+..||||
T Consensus 28 n~gddhgfsplhwaakegh~aivemll~rgar-vn~tnmgddtplhlaaahghrdivqkll~~ka---dvnavnehgntp 103 (448)
T KOG0195|consen 28 NVGDDHGFSPLHWAAKEGHVAIVEMLLSRGAR-VNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKA---DVNAVNEHGNTP 103 (448)
T ss_pred ccccccCcchhhhhhhcccHHHHHHHHhcccc-cccccCCCCcchhhhhhcccHHHHHHHHHHhc---ccchhhccCCCc
Confidence 33388999999999999999999999998765 45577777899999999999999999999854 477779999999
Q ss_pred HHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchH
Q 047454 116 LHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTE 169 (339)
Q Consensus 116 LHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~ 169 (339)
||+|+..|.. ...|.++. .....+.| +|.||.|-+..
T Consensus 104 lhyacfwgyd-----------------qiaedli~~ga~v~icnk~g~tpldkakp 142 (448)
T KOG0195|consen 104 LHYACFWGYD-----------------QIAEDLISCGAAVNICNKKGMTPLDKAKP 142 (448)
T ss_pred hhhhhhhcHH-----------------HHHHHHHhccceeeecccCCCCchhhhch
Confidence 9999999873 11222221 22345677 89999887654
No 11
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.51 E-value=3.8e-14 Score=140.74 Aligned_cols=101 Identities=16% Similarity=0.055 Sum_probs=68.2
Q ss_pred HHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHH-HCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCcc
Q 047454 24 VRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIA-AYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKS 102 (339)
Q Consensus 24 v~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~-~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~ 102 (339)
++.|+.. +.+.+..++++.||||.||+.|+.+.|+.|++ .+--..+..|..|.||||+|+.+||.++++.|+++|+..
T Consensus 289 vd~Ll~~-Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~ 367 (929)
T KOG0510|consen 289 VDNLLGF-GASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALF 367 (929)
T ss_pred HHHHHHc-CCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhh
Confidence 3344433 44444446777788888888888888888887 333345556777888888888888888888888887531
Q ss_pred ccccccccCCCchHHHhhhcCCC
Q 047454 103 NWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 103 ~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
......|.+|+||||+|+..|+.
T Consensus 368 ~~~~e~D~dg~TaLH~Aa~~g~~ 390 (929)
T KOG0510|consen 368 LNMSEADSDGNTALHLAAKYGNT 390 (929)
T ss_pred hcccccccCCchhhhHHHHhccH
Confidence 11111288888888888888875
No 12
>PHA02791 ankyrin-like protein; Provisional
Probab=99.49 E-value=1.3e-13 Score=127.08 Aligned_cols=98 Identities=10% Similarity=0.005 Sum_probs=75.8
Q ss_pred HHHHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcc
Q 047454 19 QAVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSS 98 (339)
Q Consensus 19 ~a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~ 98 (339)
.+.++++.|++.. .+ ..|.+|+||||+|++.|+.++++.|++.+++. +.. +|+||||+|+.+|+.+++++|++.
T Consensus 10 ~~~~~~~~Lis~~-a~--~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~-n~~--d~~TpLh~Aa~~g~~eiV~lLL~~ 83 (284)
T PHA02791 10 KSKQLKSFLSSKD-AF--KADVHGHSALYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILLFS 83 (284)
T ss_pred CHHHHHHHHHhCC-CC--CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCC-cCC--CCCCHHHHHHHCCCHHHHHHHHHC
Confidence 4567788888763 22 23778899999999999999999988877653 222 468999999999999999999888
Q ss_pred cCccccccccccCCCchHHHhhhcCCC
Q 047454 99 TFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 99 ~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
++ .++.+|.+|+||||+|+..|+.
T Consensus 84 Ga---dvn~~d~~G~TpLh~Aa~~g~~ 107 (284)
T PHA02791 84 GM---DDSQFDDKGNTALYYAVDSGNM 107 (284)
T ss_pred CC---CCCCCCCCCCCHHHHHHHcCCH
Confidence 75 3555688899999999988875
No 13
>PHA02791 ankyrin-like protein; Provisional
Probab=99.49 E-value=1.5e-13 Score=126.80 Aligned_cols=97 Identities=14% Similarity=0.013 Sum_probs=70.1
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
++++.|++.. .+.+ ..+|+||||+|+..|+.++++.|++.+.+. +.+|..|+||||+|+..|+.+++++|++.++
T Consensus 44 eiv~~Ll~~g-a~~n--~~d~~TpLh~Aa~~g~~eiV~lLL~~Gadv-n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~ga- 118 (284)
T PHA02791 44 RLVCTLLNAG-ALKN--LLENEFPLHQAATLEDTKIVKILLFSGMDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKNW- 118 (284)
T ss_pred HHHHHHHHCc-CCCc--CCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-
Confidence 5666666664 2222 124678888888888888888888776553 4578888888888888888888888888775
Q ss_pred cccccccccCC-CchHHHhhhcCCC
Q 047454 102 SNWLGSNDNIR-NNILHFGGKLVPS 125 (339)
Q Consensus 102 ~~~~~~~D~~G-nTpLHlA~~~~~~ 125 (339)
.++.+|.+| +||||+|+..|+.
T Consensus 119 --din~~~~~g~~TpL~~Aa~~g~~ 141 (284)
T PHA02791 119 --RLMFYGKTGWKTSFYHAVMLNDV 141 (284)
T ss_pred --CcCccCCCCCcHHHHHHHHcCCH
Confidence 244456666 4888888888874
No 14
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.49 E-value=1.1e-13 Score=135.66 Aligned_cols=100 Identities=16% Similarity=0.144 Sum_probs=80.1
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.+++.. .+.+..|.+|.||||+|++.|+.++++.|++.+++. +.+|..|+||||+|+.+++.+++++|++.++
T Consensus 104 ~~~i~~ll~~g-~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~ 181 (434)
T PHA02874 104 KDMIKTILDCG-IDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADV-NIEDDNGCYPIHIAIKHNFFDIIKLLLEKGA 181 (434)
T ss_pred HHHHHHHHHCc-CCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCC
Confidence 46777777774 333444888999999999999999999999887764 5578889999999999999999999998875
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++..|.+|+||||+|+..|+.
T Consensus 182 ---~~n~~~~~g~tpL~~A~~~g~~ 203 (434)
T PHA02874 182 ---YANVKDNNGESPLHNAAEYGDY 203 (434)
T ss_pred ---CCCCCCCCCCCHHHHHHHcCCH
Confidence 2445588899999999988875
No 15
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.48 E-value=1.7e-13 Score=134.26 Aligned_cols=126 Identities=12% Similarity=0.000 Sum_probs=98.9
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|.||||+|++.|+.++++.|++.+++. +..|..|+||||+|+..|+.+++++|++.++
T Consensus 137 ~~~v~~Ll~~g-ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~-n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~ 214 (434)
T PHA02874 137 LESIKMLFEYG-ADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYA-NVKDNNGESPLHNAAEYGDYACIKLLIDHGN 214 (434)
T ss_pred HHHHHHHHhCC-CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 46788888875 333334889999999999999999999999987664 4578999999999999999999999999985
Q ss_pred ccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcchhHHHhhc-CCCCcchhchH
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVHPFLREAVN-NEQTPREVFTE 169 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~~~~~~~~n-~g~tp~dl~~~ 169 (339)
.+..+|.+|.||||.|+..++. .++.++.....+..+ +|.||+..+..
T Consensus 215 ---~i~~~~~~g~TpL~~A~~~~~~------------------~i~~Ll~~~~in~~d~~G~TpLh~A~~ 263 (434)
T PHA02874 215 ---HIMNKCKNGFTPLHNAIIHNRS------------------AIELLINNASINDQDIDGSTPLHHAIN 263 (434)
T ss_pred ---CCcCCCCCCCCHHHHHHHCChH------------------HHHHHHcCCCCCCcCCCCCCHHHHHHh
Confidence 3555688999999999987541 122222222344566 99999988765
No 16
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.48 E-value=1.9e-13 Score=116.55 Aligned_cols=99 Identities=11% Similarity=0.074 Sum_probs=78.3
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHH---HHHHHHHCCCCccccc-CCCchHhhHHHHcCChHHHHHHHc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKF---VQEIIAAYKGSVYWED-ENKHTIFHVAVLHRRAEVFNLIYS 97 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~i---v~~Ll~~~p~~~~~~d-~~G~t~LH~A~~~~~~~iv~~Ll~ 97 (339)
++++.+.+.. .+.+..|.+|+||||+|+..|+.+. ++.|++.+.+. +.+| ..|+||||+|+.+++.+++++|++
T Consensus 38 ~~~~~l~~~g-~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadi-n~~d~~~g~TpLh~A~~~g~~~iv~~Ll~ 115 (166)
T PHA02743 38 EVAPFISGDG-HLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADI-NARELGTGNTLLHIAASTKNYELAEWLCR 115 (166)
T ss_pred HHHHHHhhcc-hhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCC-CCCCCCCCCcHHHHHHHhCCHHHHHHHHh
Confidence 4555555543 2333448899999999999998654 78899887664 5577 589999999999999999999995
Q ss_pred -ccCccccccccccCCCchHHHhhhcCCC
Q 047454 98 -STFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 98 -~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.+. .++.+|.+|.||||+|+..++.
T Consensus 116 ~~ga---d~~~~d~~g~tpL~~A~~~~~~ 141 (166)
T PHA02743 116 QLGV---NLGAINYQHETAYHIAYKMRDR 141 (166)
T ss_pred ccCC---CccCcCCCCCCHHHHHHHcCCH
Confidence 564 3555699999999999999884
No 17
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.48 E-value=1.6e-13 Score=133.42 Aligned_cols=59 Identities=8% Similarity=-0.115 Sum_probs=26.5
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcc
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSS 98 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~ 98 (339)
+.+|.||||+|+..|+.++++.|++.+.+. +..+.+|+||||.|+..|+.+++++|++.
T Consensus 32 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~ 90 (413)
T PHA02875 32 IYDGISPIKLAMKFRDSEAIKLLMKHGAIP-DVKYPDIESELHDAVEEGDVKAVEELLDL 90 (413)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-cccCCCcccHHHHHHHCCCHHHHHHHHHc
Confidence 444555555555555555555555443321 22333344444444444444444444443
No 18
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.47 E-value=1.7e-13 Score=135.85 Aligned_cols=97 Identities=13% Similarity=0.112 Sum_probs=83.1
Q ss_pred HHHHHHHhccCCCCcccccc-CCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 22 EIVRIICKGVIWNDPQNQQL-LKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~-g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
++++.|++.+ .+.+..|.+ |+||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..++.+++++|++.|+
T Consensus 148 ~iv~~Ll~~g-adin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga 225 (477)
T PHA02878 148 EITKLLLSYG-ADINMKDRHKGNTALHYATENKDQRLTELLLSYGANV-NIPDKTNNSPLHHAVKHYNKPIVHILLENGA 225 (477)
T ss_pred HHHHHHHHcC-CCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 4788888775 334444777 999999999999999999999988774 5689999999999999999999999999986
Q ss_pred ccccccccccCCCchHHHhhhcC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLV 123 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~ 123 (339)
.++.+|.+|+||||+|+..+
T Consensus 226 ---~in~~d~~g~TpLh~A~~~~ 245 (477)
T PHA02878 226 ---STDARDKCGNTPLHISVGYC 245 (477)
T ss_pred ---CCCCCCCCCCCHHHHHHHhc
Confidence 35666999999999999764
No 19
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.47 E-value=2.5e-13 Score=125.60 Aligned_cols=102 Identities=14% Similarity=0.057 Sum_probs=84.9
Q ss_pred HHHHHHHHhcc-CCCCccc--cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHc
Q 047454 21 VEIVRIICKGV-IWNDPQN--QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYS 97 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~--d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~ 97 (339)
.++++.|++.+ +.+.... |.+|.||||+|++.|+.++++.|++.+++.....+..|.||||+|+.+++.+++++|++
T Consensus 46 ~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~ 125 (300)
T PHA02884 46 TDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLS 125 (300)
T ss_pred HHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 47888999886 5444311 46899999999999999999999999887543235689999999999999999999999
Q ss_pred ccCccccccccccCCCchHHHhhhcCCC
Q 047454 98 STFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 98 ~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.|+ .++.+|.+|.||||+|+..++.
T Consensus 126 ~GA---din~kd~~G~TpL~~A~~~~~~ 150 (300)
T PHA02884 126 YGA---DINIQTNDMVTPIELALMICNN 150 (300)
T ss_pred CCC---CCCCCCCCCCCHHHHHHHhCCh
Confidence 986 3566699999999999987764
No 20
>PHA02741 hypothetical protein; Provisional
Probab=99.45 E-value=5.7e-13 Score=113.86 Aligned_cols=89 Identities=9% Similarity=-0.012 Sum_probs=74.6
Q ss_pred CCCccccccCCcHHHHHHHCCc----HHHHHHHHHHCCCCcccccC-CCchHhhHHHHcCChHHHHHHHcc-cCcccccc
Q 047454 33 WNDPQNQQLLKKAFFKAATLGI----SKFVQEIIAAYKGSVYWEDE-NKHTIFHVAVLHRRAEVFNLIYSS-TFKSNWLG 106 (339)
Q Consensus 33 ~~~~~~d~~g~tpLh~Aa~~G~----~~iv~~Ll~~~p~~~~~~d~-~G~t~LH~A~~~~~~~iv~~Ll~~-~~~~~~~~ 106 (339)
.+.+..|.+|+||||+|+..|+ .++++.|++.+++. +.+|. +|+||||+|+.+++.+++++|++. +. .++
T Consensus 51 a~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadi-n~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~---~~~ 126 (169)
T PHA02741 51 AALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADI-NAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGI---DLH 126 (169)
T ss_pred hhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCC-CCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCC---CCC
Confidence 4445558899999999999999 58889999887775 55664 899999999999999999999974 53 345
Q ss_pred ccccCCCchHHHhhhcCCC
Q 047454 107 SNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 107 ~~D~~GnTpLHlA~~~~~~ 125 (339)
..|.+|.||||+|+..++.
T Consensus 127 ~~n~~g~tpL~~A~~~~~~ 145 (169)
T PHA02741 127 FCNADNKSPFELAIDNEDV 145 (169)
T ss_pred cCCCCCCCHHHHHHHCCCH
Confidence 5599999999999999873
No 21
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.44 E-value=1.5e-13 Score=129.37 Aligned_cols=100 Identities=11% Similarity=0.090 Sum_probs=76.5
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++|+.|++.. .+.+.......|||--||..|+.+++++|++.+.|. +..|..|+|.||+|+.+|+.+++++|++.|+
T Consensus 97 l~vVk~L~~~g-a~VN~tT~TNStPLraACfDG~leivKyLvE~gad~-~IanrhGhTcLmIa~ykGh~~I~qyLle~gA 174 (615)
T KOG0508|consen 97 LEVVKLLLRRG-ASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADP-EIANRHGHTCLMIACYKGHVDIAQYLLEQGA 174 (615)
T ss_pred HHHHHHHHHhc-CccccccccCCccHHHHHhcchhHHHHHHHHcCCCC-cccccCCCeeEEeeeccCchHHHHHHHHhCC
Confidence 36777777776 333333556678888888888888888888776664 5578888888888888888888888888876
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.++..|||+||.+++.|+.
T Consensus 175 ---Dvn~ks~kGNTALH~caEsG~v 196 (615)
T KOG0508|consen 175 ---DVNAKSYKGNTALHDCAESGSV 196 (615)
T ss_pred ---CcchhcccCchHHHhhhhcccH
Confidence 3666688888888888888874
No 22
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.44 E-value=2.1e-13 Score=135.61 Aligned_cols=85 Identities=15% Similarity=0.139 Sum_probs=75.2
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHc-ccCccccccccccCCCchHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYS-STFKSNWLGSNDNIRNNILH 117 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~-~~~~~~~~~~~D~~GnTpLH 117 (339)
|.+|.||||+||++|+.+.++.|+..+.+ ++.++.++.||||.||.+|+.+.++.|++ .+ ...++..|..|+||||
T Consensus 270 d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~-I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~--~rllne~D~~g~tpLH 346 (929)
T KOG0510|consen 270 DNDGCTPLHYAARQGGPESVDNLLGFGAS-INSKNKDEESPLHFAAIYGRINTVERLLQESD--TRLLNESDLHGMTPLH 346 (929)
T ss_pred cccCCchHHHHHHcCChhHHHHHHHcCCc-ccccCCCCCCchHHHHHcccHHHHHHHHhCcC--ccccccccccCCCchh
Confidence 88999999999999999999999998766 57799999999999999999999999999 43 3344444999999999
Q ss_pred HhhhcCCCC
Q 047454 118 FGGKLVPSS 126 (339)
Q Consensus 118 lA~~~~~~~ 126 (339)
+|++.||..
T Consensus 347 laa~~gH~~ 355 (929)
T KOG0510|consen 347 LAAKSGHDR 355 (929)
T ss_pred hhhhcCHHH
Confidence 999999953
No 23
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.42 E-value=1.9e-13 Score=114.86 Aligned_cols=112 Identities=13% Similarity=0.015 Sum_probs=77.4
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHH----HCCCCcccccCCCchHhhHHHHcCChH---HHHHHHcccCccccccccc-c
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIA----AYKGSVYWEDENKHTIFHVAVLHRRAE---VFNLIYSSTFKSNWLGSND-N 110 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~----~~p~~~~~~d~~G~t~LH~A~~~~~~~---iv~~Ll~~~~~~~~~~~~D-~ 110 (339)
|.+|.||||+|++.|+...+..... ..+.....+|.+|+||||+|+..++.+ ++++|++.++ .++.+| .
T Consensus 14 d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~ga---din~~~~~ 90 (154)
T PHA02736 14 DIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGA---DINGKERV 90 (154)
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCC---CccccCCC
Confidence 7889999999999998432211111 112234456889999999999999874 6788888875 356666 5
Q ss_pred CCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc--hhHHHhhc-CCCCcchhchHH
Q 047454 111 IRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH--PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 111 ~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~--~~~~~~~n-~g~tp~dl~~~~ 170 (339)
+|+||||+|+..++. +.++.++. ....+..| .|.||+.++...
T Consensus 91 ~g~T~Lh~A~~~~~~-----------------~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~ 136 (154)
T PHA02736 91 FGNTPLHIAVYTQNY-----------------ELATWLCNQPGVNMEILNYAFKTPYYVACER 136 (154)
T ss_pred CCCcHHHHHHHhCCH-----------------HHHHHHHhCCCCCCccccCCCCCHHHHHHHc
Confidence 899999999999883 12222221 22345567 899999887653
No 24
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.42 E-value=7.6e-13 Score=128.65 Aligned_cols=83 Identities=14% Similarity=0.037 Sum_probs=49.8
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHF 118 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHl 118 (339)
+.+|+||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..|+.+++++|++.++ .++.+|..|+||||+
T Consensus 99 ~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~-~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~---~~~~~d~~g~TpL~~ 174 (413)
T PHA02875 99 YKDGMTPLHLATILKKLDIMKLLIARGADP-DIPNTDKFSPLHLAVMMGDIKGIELLIDHKA---CLDIEDCCGCTPLII 174 (413)
T ss_pred cCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC---CCCCCCCCCCCHHHH
Confidence 445666666666666666666666655543 3355566666666666666666666666653 233346666666666
Q ss_pred hhhcCCC
Q 047454 119 GGKLVPS 125 (339)
Q Consensus 119 A~~~~~~ 125 (339)
|+..|+.
T Consensus 175 A~~~g~~ 181 (413)
T PHA02875 175 AMAKGDI 181 (413)
T ss_pred HHHcCCH
Confidence 6666653
No 25
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.42 E-value=3.4e-13 Score=114.93 Aligned_cols=118 Identities=14% Similarity=0.084 Sum_probs=85.9
Q ss_pred CCCCccccccCCcHHHHHHHCCcHH----HHHHHHHHCCCCcccccCCCchHhhHHHHcCChHH---HHHHHcccCcccc
Q 047454 32 IWNDPQNQQLLKKAFFKAATLGISK----FVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEV---FNLIYSSTFKSNW 104 (339)
Q Consensus 32 ~~~~~~~d~~g~tpLh~Aa~~G~~~----iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~i---v~~Ll~~~~~~~~ 104 (339)
+.|..+.+.++.+++|.||+.|+.+ +++.|++.++ ..+.+|.+|+||||+|+.+|+.+. +++|++.++ .
T Consensus 10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~-~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Ga---d 85 (166)
T PHA02743 10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGH-LLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGA---D 85 (166)
T ss_pred chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcch-hhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCC---C
Confidence 4455555788999999999999984 4445555443 356689999999999999998654 789999886 3
Q ss_pred ccccc-cCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhc--chhHHHhhc-CCCCcchhchHH
Q 047454 105 LGSND-NIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLV--HPFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 105 ~~~~D-~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~--~~~~~~~~n-~g~tp~dl~~~~ 170 (339)
++.+| .+|+||||+|+..++.+ .++.++ .....+..| +|.||+.++...
T Consensus 86 in~~d~~~g~TpLh~A~~~g~~~-----------------iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~ 138 (166)
T PHA02743 86 INARELGTGNTLLHIAASTKNYE-----------------LAEWLCRQLGVNLGAINYQHETAYHIAYKM 138 (166)
T ss_pred CCCCCCCCCCcHHHHHHHhCCHH-----------------HHHHHHhccCCCccCcCCCCCCHHHHHHHc
Confidence 56666 58999999999998841 222222 122345567 999999887553
No 26
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.41 E-value=1e-12 Score=138.30 Aligned_cols=76 Identities=16% Similarity=0.213 Sum_probs=62.0
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
++++.+++.. .|.+..|.+|+||||+||.+|+.++++.|++.+.+ ++.+|.+|+||||+|+..|+.+++++|++.+
T Consensus 539 ~~l~~Ll~~G-~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad-in~~d~~G~TpL~~A~~~g~~~iv~~L~~~~ 614 (823)
T PLN03192 539 ALLEELLKAK-LDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACN-VHIRDANGNTALWNAISAKHHKIFRILYHFA 614 (823)
T ss_pred HHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHhcC
Confidence 5677777664 44455599999999999999999999999998766 4668999999999888888888877776543
No 27
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.40 E-value=1e-12 Score=130.09 Aligned_cols=78 Identities=13% Similarity=0.023 Sum_probs=42.7
Q ss_pred HHHHHHHHHhcc-CCCCccccccCCcHHHHHHHCC--cHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHH
Q 047454 20 AVEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLG--ISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIY 96 (339)
Q Consensus 20 a~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G--~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll 96 (339)
..++++.|++.. +.+. .|.+|.||||.|++.| +.++++.|++.+++. +.+|..|+||||+|+..|+.+++++|+
T Consensus 120 ~~~iv~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~di-n~~d~~g~tpL~~A~~~~~~~iv~~Ll 196 (480)
T PHA03100 120 SYSIVEYLLDNGANVNI--KNSDGENLLHLYLESNKIDLKILKLLIDKGVDI-NAKNRYGYTPLHIAVEKGNIDVIKFLL 196 (480)
T ss_pred hHHHHHHHHHcCCCCCc--cCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCc-ccccCCCCCHHHHHHHhCCHHHHHHHH
Confidence 345555555553 3222 2555666666666666 566666666555443 334555666666666666666666666
Q ss_pred cccC
Q 047454 97 SSTF 100 (339)
Q Consensus 97 ~~~~ 100 (339)
+.|+
T Consensus 197 ~~ga 200 (480)
T PHA03100 197 DNGA 200 (480)
T ss_pred HcCC
Confidence 5553
No 28
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.39 E-value=9.1e-13 Score=130.63 Aligned_cols=125 Identities=11% Similarity=0.047 Sum_probs=94.5
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHc-CChHHHHHHHccc
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLH-RRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~-~~~~iv~~Ll~~~ 99 (339)
.++++.|++.+ .+.+..|.+|+||||.|++.|+.++++.|++.+++. +.+|..|+||||+|+.. ++.+++++|++.|
T Consensus 181 ~~iv~~Ll~~g-ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i-n~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~g 258 (477)
T PHA02878 181 QRLTELLLSYG-ANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST-DARDKCGNTPLHISVGYCKDYDILKLLLEHG 258 (477)
T ss_pred HHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhcCCHHHHHHHHHcC
Confidence 47888888875 334444899999999999999999999999988764 56899999999999976 6899999999998
Q ss_pred Cccccccccc-cCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhc-chhHHHhhc-CCCCcchhchH
Q 047454 100 FKSNWLGSND-NIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLV-HPFLREAVN-NEQTPREVFTE 169 (339)
Q Consensus 100 ~~~~~~~~~D-~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~-~~~~~~~~n-~g~tp~dl~~~ 169 (339)
+ .++.+| ..|+||||+|. ++.+ .++.++ .....+..+ +|.||++++.+
T Consensus 259 a---dvn~~~~~~g~TpLh~A~--~~~~-----------------~v~~Ll~~gadin~~d~~g~TpL~~A~~ 309 (477)
T PHA02878 259 V---DVNAKSYILGLTALHSSI--KSER-----------------KLKLLLEYGADINSLNSYKLTPLSSAVK 309 (477)
T ss_pred C---CCCccCCCCCCCHHHHHc--cCHH-----------------HHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 6 355664 48999999993 2210 111111 112245567 89999988754
No 29
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.39 E-value=4.6e-13 Score=126.08 Aligned_cols=101 Identities=11% Similarity=0.023 Sum_probs=88.5
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.+++++|++.. .|++..|+.|.|.||+||.+||++|+++|++.+.|. +.++.+|.|+||.+++.|+.+++++|+++++
T Consensus 130 leivKyLvE~g-ad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADv-n~ks~kGNTALH~caEsG~vdivq~Ll~~ga 207 (615)
T KOG0508|consen 130 LEIVKYLVEHG-ADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADV-NAKSYKGNTALHDCAESGSVDIVQLLLKHGA 207 (615)
T ss_pred hHHHHHHHHcC-CCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCc-chhcccCchHHHhhhhcccHHHHHHHHhCCc
Confidence 37899999885 444444999999999999999999999999998885 5589999999999999999999999999984
Q ss_pred ccccccccccCCCchHHHhhhcCCCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPSSE 127 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~~~ 127 (339)
....|..|.|||-.|+..|+.+.
T Consensus 208 ----~i~~d~~GmtPL~~Aa~tG~~~i 230 (615)
T KOG0508|consen 208 ----KIDVDGHGMTPLLLAAVTGHTDI 230 (615)
T ss_pred ----eeeecCCCCchHHHHhhhcchHH
Confidence 45568999999999999999643
No 30
>PHA03095 ankyrin-like protein; Provisional
Probab=99.38 E-value=1.9e-12 Score=127.78 Aligned_cols=101 Identities=14% Similarity=0.073 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHhccCCCCccccccCCcHHHHHHHCC---cHHHHHHHHHHCCCCcccccCCCchHhhHHHHcC-ChHHH
Q 047454 17 NMQAVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLG---ISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHR-RAEVF 92 (339)
Q Consensus 17 ~~~a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G---~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~-~~~iv 92 (339)
.....++++.|++.+ .+.+..+..|.||||+|+..| +.++++.|++.+++. +.+|..|+||||+|+.++ +.+++
T Consensus 23 ~~~~~~~v~~Ll~~g-a~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadi-n~~~~~g~TpLh~A~~~~~~~~iv 100 (471)
T PHA03095 23 SNVTVEEVRRLLAAG-ADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADV-NAPERCGFTPLHLYLYNATTLDVI 100 (471)
T ss_pred CCCCHHHHHHHHHcC-CCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCcHHHH
Confidence 334568889998885 333444888999999999999 999999999988775 558889999999999999 59999
Q ss_pred HHHHcccCccccccccccCCCchHHHhhhc
Q 047454 93 NLIYSSTFKSNWLGSNDNIRNNILHFGGKL 122 (339)
Q Consensus 93 ~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~ 122 (339)
++|++.|+ .++.+|.+|+||||+|+..
T Consensus 101 ~lLl~~ga---~in~~~~~g~tpLh~a~~~ 127 (471)
T PHA03095 101 KLLIKAGA---DVNAKDKVGRTPLHVYLSG 127 (471)
T ss_pred HHHHHcCC---CCCCCCCCCCCHHHHHhhC
Confidence 99999986 3566699999999999943
No 31
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.36 E-value=1.8e-12 Score=135.75 Aligned_cols=92 Identities=15% Similarity=-0.001 Sum_probs=82.1
Q ss_pred CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccC
Q 047454 32 IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNI 111 (339)
Q Consensus 32 ~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~ 111 (339)
+.+.+..+.+|+||||.|+..|+.++|+.|++++.++ +.+|+.|+||||.|+..|+.+++.+|+++|+ .++..|.+
T Consensus 530 ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv-~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA---~vna~d~~ 605 (1143)
T KOG4177|consen 530 GANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADV-NAKDKLGYTPLHQAAQQGHNDIAELLLKHGA---SVNAADLD 605 (1143)
T ss_pred CCceehhcccccchHHHHHhcCCchHHHHhhhCCccc-cccCCCCCChhhHHHHcChHHHHHHHHHcCC---CCCccccc
Confidence 5556656889999999999999999999999998876 5578999999999999999999999999987 46777999
Q ss_pred CCchHHHhhhcCCCCC
Q 047454 112 RNNILHFGGKLVPSSE 127 (339)
Q Consensus 112 GnTpLHlA~~~~~~~~ 127 (339)
|+||||.|++.|+...
T Consensus 606 g~TpL~iA~~lg~~~~ 621 (1143)
T KOG4177|consen 606 GFTPLHIAVRLGYLSV 621 (1143)
T ss_pred CcchhHHHHHhcccch
Confidence 9999999999999643
No 32
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.36 E-value=2.9e-12 Score=127.57 Aligned_cols=99 Identities=8% Similarity=-0.071 Sum_probs=76.9
Q ss_pred HHHHHHHHHhcc-CCCCccccccCCcHHHHHHHC---CcHHHHHHHHHHCCCCcccccCCCchHhhHHHHc--CChHHHH
Q 047454 20 AVEIVRIICKGV-IWNDPQNQQLLKKAFFKAATL---GISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLH--RRAEVFN 93 (339)
Q Consensus 20 a~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~---G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~--~~~~iv~ 93 (339)
..++++.|++.+ +.+.. |.+|.||||.|+.. |+.++++.|++.+.+..+.+|..|+||||+|+.. ++.++++
T Consensus 87 ~~~iv~~Ll~~Gadin~~--d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~ 164 (494)
T PHA02989 87 IKKIVKLLLKFGADINLK--TFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIK 164 (494)
T ss_pred HHHHHHHHHHCCCCCCCC--CCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHH
Confidence 467888888886 55444 88899999987655 6789999999988776456788999999998764 5789999
Q ss_pred HHHcccCccccccc-cccCCCchHHHhhhcC
Q 047454 94 LIYSSTFKSNWLGS-NDNIRNNILHFGGKLV 123 (339)
Q Consensus 94 ~Ll~~~~~~~~~~~-~D~~GnTpLHlA~~~~ 123 (339)
+|++.|++ ++. .|..|.||||.|+..+
T Consensus 165 ~Ll~~Gad---i~~~~~~~g~tpL~~a~~~~ 192 (494)
T PHA02989 165 ILLSFGVN---LFEKTSLYGLTPMNIYLRND 192 (494)
T ss_pred HHHHcCCC---ccccccccCCChHHHHHhcc
Confidence 99998863 444 3778999999887654
No 33
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.34 E-value=2.8e-12 Score=97.28 Aligned_cols=72 Identities=18% Similarity=0.154 Sum_probs=55.3
Q ss_pred HHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 46 FFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 46 Lh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
||+|++.|+.++++.|++.+++.. . |+||||+|+.+|+.+++++|++.+. .++.+|.+|+||||+|+..++.
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~----~-~~~~l~~A~~~~~~~~~~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~ 72 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADIN----L-GNTALHYAAENGNLEIVKLLLENGA---DINSQDKNGNTALHYAAENGNL 72 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTT----S-SSBHHHHHHHTTTHHHHHHHHHTTT---CTT-BSTTSSBHHHHHHHTTHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCC----C-CCCHHHHHHHcCCHHHHHHHHHhcc---cccccCCCCCCHHHHHHHcCCH
Confidence 688888888888888888664431 2 7888888888888888888888775 3555578888888888888773
No 34
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.34 E-value=6.2e-12 Score=111.22 Aligned_cols=101 Identities=18% Similarity=0.106 Sum_probs=80.2
Q ss_pred HHHHHHHHHhccCCCCcccc-ccCCcHHHHHHHC---CcHHHHHHHHHHCCCCcccccCCCchHhhHHHH--cCChHHHH
Q 047454 20 AVEIVRIICKGVIWNDPQNQ-QLLKKAFFKAATL---GISKFVQEIIAAYKGSVYWEDENKHTIFHVAVL--HRRAEVFN 93 (339)
Q Consensus 20 a~~iv~~L~~~~~~~~~~~d-~~g~tpLh~Aa~~---G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~--~~~~~iv~ 93 (339)
..++++.|++.. .+.+..+ .+|+||||+|+.. |+.++++.|++.+.+. +.+|.+|+||||+|+. .++.++++
T Consensus 65 ~~eiv~~Ll~~g-advn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadi-n~~d~~G~TpLh~a~~~~~~~~~iv~ 142 (209)
T PHA02859 65 NVEILKFLIENG-ADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSI-TEEDEDGKNLLHMYMCNFNVRINVIK 142 (209)
T ss_pred CHHHHHHHHHCC-CCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhccCCHHHHH
Confidence 579999999986 3333334 5799999998763 5799999999887764 6689999999999986 46899999
Q ss_pred HHHcccCccccccccccCCCchHHHh-hhcCCC
Q 047454 94 LIYSSTFKSNWLGSNDNIRNNILHFG-GKLVPS 125 (339)
Q Consensus 94 ~Ll~~~~~~~~~~~~D~~GnTpLHlA-~~~~~~ 125 (339)
+|++.++ .++.+|.+|+||||.+ +..++.
T Consensus 143 ~Li~~ga---din~~d~~g~t~Lh~~a~~~~~~ 172 (209)
T PHA02859 143 LLIDSGV---SFLNKDFDNNNILYSYILFHSDK 172 (209)
T ss_pred HHHHcCC---CcccccCCCCcHHHHHHHhcCCH
Confidence 9999986 3566799999999965 445553
No 35
>PHA02798 ankyrin-like protein; Provisional
Probab=99.33 E-value=4.9e-12 Score=125.81 Aligned_cols=99 Identities=13% Similarity=0.165 Sum_probs=82.8
Q ss_pred HHHHHHHHHhccCCCCccccccCCcHHHHHHHCC---cHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCC---hHHHH
Q 047454 20 AVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLG---ISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRR---AEVFN 93 (339)
Q Consensus 20 a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G---~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~---~~iv~ 93 (339)
..++++.|++.+ .|.+..|.+|+||||+|+.+| +.++++.|++.+++. +.+|.+|.||||+|+..++ .++++
T Consensus 88 ~~~iv~~Ll~~G-adiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~tpL~~a~~~~~~~~~~vv~ 165 (489)
T PHA02798 88 MLDIVKILIENG-ADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADT-TLLDKDGFTMLQVYLQSNHHIDIEIIK 165 (489)
T ss_pred HHHHHHHHHHCC-CCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCcchHHHHH
Confidence 478999999985 344444889999999999986 789999999998875 5689999999999999988 89999
Q ss_pred HHHcccCcccccccc-ccCCCchHHHhhhcC
Q 047454 94 LIYSSTFKSNWLGSN-DNIRNNILHFGGKLV 123 (339)
Q Consensus 94 ~Ll~~~~~~~~~~~~-D~~GnTpLHlA~~~~ 123 (339)
+|++.|++ ++.+ |..|.||||.+...+
T Consensus 166 ~Ll~~gad---in~~~~~~~~t~Lh~~~~~~ 193 (489)
T PHA02798 166 LLLEKGVD---INTHNNKEKYDTLHCYFKYN 193 (489)
T ss_pred HHHHhCCC---cccccCcCCCcHHHHHHHhc
Confidence 99999863 5555 568999999987653
No 36
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.33 E-value=1.5e-12 Score=109.36 Aligned_cols=84 Identities=7% Similarity=-0.048 Sum_probs=71.4
Q ss_pred ccccCCcHHHHHHHCCcHH---HHHHHHHHCCCCccccc-CCCchHhhHHHHcCChHHHHHHHcc-cCccccccccccCC
Q 047454 38 NQQLLKKAFFKAATLGISK---FVQEIIAAYKGSVYWED-ENKHTIFHVAVLHRRAEVFNLIYSS-TFKSNWLGSNDNIR 112 (339)
Q Consensus 38 ~d~~g~tpLh~Aa~~G~~~---iv~~Ll~~~p~~~~~~d-~~G~t~LH~A~~~~~~~iv~~Ll~~-~~~~~~~~~~D~~G 112 (339)
.|.+|+||||+|+..|+.+ +++.|++.+.+. +.+| ..|+||||+|+..++.+++++|++. +. .++.+|..|
T Consensus 51 ~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi-n~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~---d~n~~~~~g 126 (154)
T PHA02736 51 YNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI-NGKERVFGNTPLHIAVYTQNYELATWLCNQPGV---NMEILNYAF 126 (154)
T ss_pred hcCCCCEEEEeecccCchhHHHHHHHHHHcCCCc-cccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCC---CCccccCCC
Confidence 3889999999999999874 688899988765 4466 5899999999999999999999974 43 355569999
Q ss_pred CchHHHhhhcCCC
Q 047454 113 NNILHFGGKLVPS 125 (339)
Q Consensus 113 nTpLHlA~~~~~~ 125 (339)
.||||+|+..++.
T Consensus 127 ~tpL~~A~~~~~~ 139 (154)
T PHA02736 127 KTPYYVACERHDA 139 (154)
T ss_pred CCHHHHHHHcCCH
Confidence 9999999998874
No 37
>PHA03095 ankyrin-like protein; Provisional
Probab=99.33 E-value=5.1e-12 Score=124.76 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=82.2
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcH--HHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcc
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGIS--KFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSS 98 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~--~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~ 98 (339)
.++++.|++.. .+++..|.+|+||||+|+..|+. .+++.+++.+.+ ++.+|.+|+||||+|+..|+.+++++|++.
T Consensus 202 ~~i~~~Ll~~g-~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~d-in~~d~~g~TpLh~A~~~~~~~~v~~LL~~ 279 (471)
T PHA03095 202 ARIVRELIRAG-CDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGIS-INARNRYGQTPLHYAAVFNNPRACRRLIAL 279 (471)
T ss_pred HHHHHHHHHcC-CCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 46677777764 44455588999999999999985 577888887665 466889999999999999999999999999
Q ss_pred cCccccccccccCCCchHHHhhhcCCC
Q 047454 99 TFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 99 ~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
|++ ++.+|.+|+||||+|+..++.
T Consensus 280 gad---~n~~~~~g~tpl~~A~~~~~~ 303 (471)
T PHA03095 280 GAD---INAVSSDGNTPLSLMVRNNNG 303 (471)
T ss_pred CCC---CcccCCCCCCHHHHHHHhCCH
Confidence 863 566699999999999999985
No 38
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.32 E-value=5.6e-12 Score=129.14 Aligned_cols=98 Identities=13% Similarity=0.034 Sum_probs=69.4
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCc--HHHHHHHHHHCCCCcccccCCCchHhhHH---------------
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGI--SKFVQEIIAAYKGSVYWEDENKHTIFHVA--------------- 83 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~--~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A--------------- 83 (339)
.++++.|++.+ .+.+..|.+|.||||+|++.|+ .++++.|++.+++. +.+|..|+||||.|
T Consensus 192 ~eIVklLLe~G-ADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADV-N~kD~~G~TPLh~Ai~~a~n~~~EIvkiL 269 (764)
T PHA02716 192 IDILEWLCNNG-VNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDM-DMKCVNGMSPIMTYIINIDNINPEITNIY 269 (764)
T ss_pred HHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhhhccCHHHHHHH
Confidence 36778887775 3333347788888888888885 47888888877664 55788888888865
Q ss_pred ----------------------HHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcC
Q 047454 84 ----------------------VLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLV 123 (339)
Q Consensus 84 ----------------------~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~ 123 (339)
+.+|+.+++++|++.|+ .++.+|.+|+||||+|+..+
T Consensus 270 ie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GA---dIN~kD~~G~TPLH~Aaa~~ 328 (764)
T PHA02716 270 IESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGV---KLHYKDSAGRTCLHQYILRH 328 (764)
T ss_pred HHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCC---ceeccCCCCCCHHHHHHHHh
Confidence 33456677777777765 35555888888888876543
No 39
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.32 E-value=6.8e-11 Score=123.45 Aligned_cols=82 Identities=12% Similarity=-0.016 Sum_probs=70.6
Q ss_pred ccCCcHHHHHHHCCcHHHHHHHHHHCCCCccc-------------ccCCCchHhhHHHHcCChHHHHHHHcccCcccccc
Q 047454 40 QLLKKAFFKAATLGISKFVQEIIAAYKGSVYW-------------EDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLG 106 (339)
Q Consensus 40 ~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~-------------~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~ 106 (339)
..|.||||+||.+|+.++++.|++++++.... ....|+||||.|+..++.+++++|++.++ .++
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ga---din 202 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPA---DIL 202 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCc---chh
Confidence 56999999999999999999999987664321 12369999999999999999999999976 466
Q ss_pred ccccCCCchHHHhhhcCC
Q 047454 107 SNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 107 ~~D~~GnTpLHlA~~~~~ 124 (339)
.+|..|+||||+|+..+.
T Consensus 203 ~~d~~g~T~Lh~A~~~~~ 220 (743)
T TIGR00870 203 TADSLGNTLLHLLVMENE 220 (743)
T ss_pred hHhhhhhHHHHHHHhhhh
Confidence 679999999999999875
No 40
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.32 E-value=8.1e-12 Score=129.17 Aligned_cols=104 Identities=14% Similarity=0.111 Sum_probs=83.0
Q ss_pred HHHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 20 AVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 20 a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
..++++.|++.+ .+.+..|.+|+||||+||+.|+.++++.|++.+++. +..+.+|.||||.|+..++.++++.+++.+
T Consensus 157 ~~~i~k~Ll~~G-advn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~-n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~ 234 (682)
T PHA02876 157 ELLIAEMLLEGG-ADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADV-NIIALDDLSVLECAVDSKNIDTIKAIIDNR 234 (682)
T ss_pred cHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCc-CccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 456777787775 333444889999999999999999999999998774 557889999999999999999999887654
Q ss_pred Ccc--------------------------ccccccccCCCchHHHhhhcCCC
Q 047454 100 FKS--------------------------NWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~--------------------------~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.+. ..++..|.+|+||||+|+..++.
T Consensus 235 ~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~ 286 (682)
T PHA02876 235 SNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSL 286 (682)
T ss_pred CCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCH
Confidence 311 02334488999999999998874
No 41
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.31 E-value=7.4e-12 Score=129.46 Aligned_cols=81 Identities=17% Similarity=0.147 Sum_probs=39.3
Q ss_pred cccCCcHHHHHHHC-CcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHH
Q 047454 39 QQLLKKAFFKAATL-GISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILH 117 (339)
Q Consensus 39 d~~g~tpLh~Aa~~-G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLH 117 (339)
|..|+||||+|+.. ++.++++.|++.+.+ ++.+|..|+||||+|+.+++.+++++|++.|++ ++..|.+|.||||
T Consensus 338 d~~g~TpLh~A~~~~~~~~iv~lLl~~gad-in~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad---~~~~~~~g~T~Lh 413 (682)
T PHA02876 338 DRLYITPLHQASTLDRNKDIVITLLELGAN-VNARDYCDKTPIHYAAVRNNVVIINTLLDYGAD---IEALSQKIGTALH 413 (682)
T ss_pred ccCCCcHHHHHHHhCCcHHHHHHHHHcCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---ccccCCCCCchHH
Confidence 55555555555543 234444444444333 233455555555555555555555555555432 2223444455555
Q ss_pred HhhhcC
Q 047454 118 FGGKLV 123 (339)
Q Consensus 118 lA~~~~ 123 (339)
+|+..+
T Consensus 414 ~A~~~~ 419 (682)
T PHA02876 414 FALCGT 419 (682)
T ss_pred HHHHcC
Confidence 554433
No 42
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.31 E-value=5e-12 Score=86.95 Aligned_cols=54 Identities=17% Similarity=0.183 Sum_probs=44.4
Q ss_pred CCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHH
Q 047454 42 LKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIY 96 (339)
Q Consensus 42 g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll 96 (339)
|+||||+|++.|+.++++.|++.+.+. +.+|.+|+||||+|+.+|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~di-n~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADI-NAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGT-T-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 789999999999999999999998774 557999999999999999999999985
No 43
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.30 E-value=8.5e-12 Score=123.53 Aligned_cols=98 Identities=10% Similarity=0.068 Sum_probs=68.2
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHH-----HHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHH--HcCChHHHH
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFK-----AATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAV--LHRRAEVFN 93 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~-----Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~--~~~~~~iv~ 93 (339)
.++++.|++.+ .+.+..+.+|.||||+ |+..|+.++++.|++.+++. +..|..|+||||+|+ ..|+.++++
T Consensus 48 ~~ivk~Ll~~g-~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i-~~~d~~g~tpL~~A~~~~~~~~~iv~ 125 (480)
T PHA03100 48 IDVVKILLDNG-ADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANV-NAPDNNGITPLLYAISKKSNSYSIVE 125 (480)
T ss_pred HHHHHHHHHcC-CCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCC-CCCCCCCCchhhHHHhcccChHHHHH
Confidence 35666666664 3333336667777777 77777777777777777665 556777777777777 777777777
Q ss_pred HHHcccCccccccccccCCCchHHHhhhcC
Q 047454 94 LIYSSTFKSNWLGSNDNIRNNILHFGGKLV 123 (339)
Q Consensus 94 ~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~ 123 (339)
+|++.|+ .++..|.+|.||||+|+..+
T Consensus 126 ~Ll~~g~---~~~~~~~~g~t~L~~A~~~~ 152 (480)
T PHA03100 126 YLLDNGA---NVNIKNSDGENLLHLYLESN 152 (480)
T ss_pred HHHHcCC---CCCccCCCCCcHHHHHHHcC
Confidence 7777764 24445777777777777777
No 44
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.29 E-value=1.2e-12 Score=119.67 Aligned_cols=111 Identities=13% Similarity=0.037 Sum_probs=84.6
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCC--------------------------------------CCcccccCCCchHh
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYK--------------------------------------GSVYWEDENKHTIF 80 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p--------------------------------------~~~~~~d~~G~t~L 80 (339)
|.+|+|+||+|+.++|.++|+.||+.+- +....-...|+|+|
T Consensus 265 DsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTAL 344 (452)
T KOG0514|consen 265 DSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTAL 344 (452)
T ss_pred cCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhh
Confidence 8999999999999999999999998532 11111234678899
Q ss_pred hHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHh--hcchhHHHhhc
Q 047454 81 HVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVEN--LVHPFLREAVN 158 (339)
Q Consensus 81 H~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~--~~~~~~~~~~n 158 (339)
++|+.+|+.++|+.|+..++ .+|.+|.||.|+|.+|+.+||.+ .++- ..|.+.....+
T Consensus 345 MLAVSHGr~d~vk~LLacgA---dVNiQDdDGSTALMCA~EHGhkE-----------------ivklLLA~p~cd~sLtD 404 (452)
T KOG0514|consen 345 MLAVSHGRVDMVKALLACGA---DVNIQDDDGSTALMCAAEHGHKE-----------------IVKLLLAVPSCDISLTD 404 (452)
T ss_pred hhhhhcCcHHHHHHHHHccC---CCccccCCccHHHhhhhhhChHH-----------------HHHHHhccCcccceeec
Confidence 99999999999999999886 47778999999999999999941 1221 23444555666
Q ss_pred -CCCCcchhchH
Q 047454 159 -NEQTPREVFTE 169 (339)
Q Consensus 159 -~g~tp~dl~~~ 169 (339)
+|-|++.++-+
T Consensus 405 ~DgSTAl~IAle 416 (452)
T KOG0514|consen 405 VDGSTALSIALE 416 (452)
T ss_pred CCCchhhhhHHh
Confidence 99999888644
No 45
>PHA02798 ankyrin-like protein; Provisional
Probab=99.27 E-value=1.4e-11 Score=122.54 Aligned_cols=100 Identities=9% Similarity=-0.002 Sum_probs=85.6
Q ss_pred HHHHHHHHHhccCCCCccccccCCcHHHHHHHC-----CcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcC---ChHH
Q 047454 20 AVEIVRIICKGVIWNDPQNQQLLKKAFFKAATL-----GISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHR---RAEV 91 (339)
Q Consensus 20 a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~-----G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~---~~~i 91 (339)
..++++.|++.+ .|.+..|.+|.||||.|+.+ ++.++++.|++.+++ ++.+|..|+||||+|+.++ +.++
T Consensus 50 ~~~iv~~Ll~~G-advn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gad-iN~~d~~G~TpLh~a~~~~~~~~~~i 127 (489)
T PHA02798 50 STDIVKLFINLG-ANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGAD-INKKNSDGETPLYCLLSNGYINNLEI 127 (489)
T ss_pred CHHHHHHHHHCC-CCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCC-CCCCCCCcCcHHHHHHHcCCcChHHH
Confidence 568999999986 34444489999999999865 779999999999887 4668999999999999986 6799
Q ss_pred HHHHHcccCccccccccccCCCchHHHhhhcCC
Q 047454 92 FNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 92 v~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
+++|++.|++ ++.+|.+|.||||+|++.++
T Consensus 128 v~~Ll~~Gad---vn~~d~~g~tpL~~a~~~~~ 157 (489)
T PHA02798 128 LLFMIENGAD---TTLLDKDGFTMLQVYLQSNH 157 (489)
T ss_pred HHHHHHcCCC---ccccCCCCCcHHHHHHHcCC
Confidence 9999999863 56669999999999999887
No 46
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.27 E-value=1.4e-11 Score=114.06 Aligned_cols=112 Identities=9% Similarity=0.016 Sum_probs=83.8
Q ss_pred ccccCCc-HHHHHHHCCcHHHHHHHHHHCCCCccc---ccCCCchHhhHHHHcCChHHHHHHHcccCcccccccc-ccCC
Q 047454 38 NQQLLKK-AFFKAATLGISKFVQEIIAAYKGSVYW---EDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSN-DNIR 112 (339)
Q Consensus 38 ~d~~g~t-pLh~Aa~~G~~~iv~~Ll~~~p~~~~~---~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~-D~~G 112 (339)
.|.+|+| +||.|++.|+.++++.|++.+++.... .|..|.||||+|+..++.+++++|++.|++ ++.+ +..|
T Consensus 28 ~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GAD---VN~~~~~~g 104 (300)
T PHA02884 28 KNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGAD---VNRYAEEAK 104 (300)
T ss_pred cCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---cCcccCCCC
Confidence 3677765 556677889999999999998875332 246899999999999999999999999863 5555 5689
Q ss_pred CchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhc-chhHHHhhc-CCCCcchhchH
Q 047454 113 NNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLV-HPFLREAVN-NEQTPREVFTE 169 (339)
Q Consensus 113 nTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~-~~~~~~~~n-~g~tp~dl~~~ 169 (339)
+||||.|+..++.+ .++.++ .....+..+ .|.||.+++.+
T Consensus 105 ~TpLh~Aa~~~~~e-----------------ivklLL~~GAdin~kd~~G~TpL~~A~~ 146 (300)
T PHA02884 105 ITPLYISVLHGCLK-----------------CLEILLSYGADINIQTNDMVTPIELALM 146 (300)
T ss_pred CCHHHHHHHcCCHH-----------------HHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999998842 122211 112234556 89999988755
No 47
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.27 E-value=1.8e-11 Score=128.97 Aligned_cols=84 Identities=13% Similarity=0.117 Sum_probs=75.0
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHF 118 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHl 118 (339)
+.++.++||.||..|+.++++.|++.+.+. +..|.+|+||||+|+.+|+.+++++|++.|+ .++.+|.+|+||||+
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~-n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga---din~~d~~G~TpL~~ 597 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDP-DIGDSKGRTPLHIAASKGYEDCVLVLLKHAC---NVHIRDANGNTALWN 597 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHhcCC---CCCCcCCCCCCHHHH
Confidence 446789999999999999999999988774 5689999999999999999999999999886 356669999999999
Q ss_pred hhhcCCCC
Q 047454 119 GGKLVPSS 126 (339)
Q Consensus 119 A~~~~~~~ 126 (339)
|+..|+.+
T Consensus 598 A~~~g~~~ 605 (823)
T PLN03192 598 AISAKHHK 605 (823)
T ss_pred HHHhCCHH
Confidence 99999863
No 48
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.27 E-value=1.7e-11 Score=122.18 Aligned_cols=79 Identities=5% Similarity=-0.057 Sum_probs=39.2
Q ss_pred HHHHHHHHHhccCCCC-ccccccCCcHHHHHHHC--CcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcC----ChHHH
Q 047454 20 AVEIVRIICKGVIWND-PQNQQLLKKAFFKAATL--GISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHR----RAEVF 92 (339)
Q Consensus 20 a~~iv~~L~~~~~~~~-~~~d~~g~tpLh~Aa~~--G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~----~~~iv 92 (339)
..++++.|++.+ .|. +..|.+|+||||+|++. ++.++++.|++.+++.....|..|.||||+|+.++ +.+++
T Consensus 123 ~~eiv~~Ll~~G-adin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv 201 (494)
T PHA02989 123 NCDMLRFLLSKG-INVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVI 201 (494)
T ss_pred cHHHHHHHHHCC-CCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHH
Confidence 345566666554 222 22255566666665432 45566666665554433223445555555554432 44555
Q ss_pred HHHHccc
Q 047454 93 NLIYSST 99 (339)
Q Consensus 93 ~~Ll~~~ 99 (339)
++|++.|
T Consensus 202 ~~Ll~~G 208 (494)
T PHA02989 202 KYLIKKG 208 (494)
T ss_pred HHHHhCC
Confidence 5555544
No 49
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.26 E-value=4.6e-12 Score=87.84 Aligned_cols=56 Identities=20% Similarity=0.190 Sum_probs=23.7
Q ss_pred HHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHh
Q 047454 61 IIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFG 119 (339)
Q Consensus 61 Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA 119 (339)
||+.++..++.+|..|.||||+|+.+|+.+++++|++.+. .++.+|.+|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~---d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGA---DPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT-----TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcC---CCCCCcCCCCCHHHhC
Confidence 3445545556667777777777777777777777775543 3444567777777765
No 50
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.25 E-value=3.3e-11 Score=91.35 Aligned_cols=74 Identities=20% Similarity=0.176 Sum_probs=62.4
Q ss_pred HHHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 21 VEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.++++.+++.. +.+. |.||||+|+.+|+.++++.|++.+++. +.+|.+|+||||+|+.+|+.+++++|++.+
T Consensus 10 ~~~~~~ll~~~~~~~~------~~~~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 82 (89)
T PF12796_consen 10 LEILKFLLEKGADINL------GNTALHYAAENGNLEIVKLLLENGADI-NSQDKNGNTALHYAAENGNLEIVKLLLEHG 82 (89)
T ss_dssp HHHHHHHHHTTSTTTS------SSBHHHHHHHTTTHHHHHHHHHTTTCT-T-BSTTSSBHHHHHHHTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHCcCCCCC------CCCHHHHHHHcCCHHHHHHHHHhcccc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 46777777754 3322 889999999999999999999988765 558899999999999999999999999997
Q ss_pred Cc
Q 047454 100 FK 101 (339)
Q Consensus 100 ~~ 101 (339)
.+
T Consensus 83 ~~ 84 (89)
T PF12796_consen 83 AD 84 (89)
T ss_dssp T-
T ss_pred CC
Confidence 53
No 51
>PHA02795 ankyrin-like protein; Provisional
Probab=99.24 E-value=2.5e-11 Score=116.95 Aligned_cols=100 Identities=8% Similarity=-0.041 Sum_probs=79.5
Q ss_pred HHHHHHHHhcc-CCCCc-cc---cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHH
Q 047454 21 VEIVRIICKGV-IWNDP-QN---QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLI 95 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~-~~---d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~L 95 (339)
.++++.|++.+ +.+.. .. +..|.||+|.|+..|+.++++.|++.+++. +.+|..|+||||+|+.+|+.+++++|
T Consensus 162 ~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADI-N~kD~~G~TpLh~Aa~~g~~eiVelL 240 (437)
T PHA02795 162 SSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDI-NQLDAGGRTLLYRAIYAGYIDLVSWL 240 (437)
T ss_pred HHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCc-CcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 35666666665 21111 01 234778899999999999999999888764 66899999999999999999999999
Q ss_pred HcccCccccccccccCCCchHHHhhhcCC
Q 047454 96 YSSTFKSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 96 l~~~~~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
++.|+ .++.+|.+|.||||+|+..|+
T Consensus 241 L~~GA---dIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 241 LENGA---NVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred HHCCC---CCCCcCCCCCCHHHHHHHcCC
Confidence 99986 466679999999999999986
No 52
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.24 E-value=3e-11 Score=115.70 Aligned_cols=126 Identities=20% Similarity=0.149 Sum_probs=94.9
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCC---------------------------------
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGS--------------------------------- 68 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~--------------------------------- 68 (339)
++|+++++.. .+++..|.+||||||.|+..||..+++++++.+.+.
T Consensus 87 e~v~~l~e~g-a~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~ 165 (527)
T KOG0505|consen 87 EMVKFLVENG-ANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGID 165 (527)
T ss_pred HHHHHHHHhc-CCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhccc
Confidence 6778888875 334444999999999999999999999999864321
Q ss_pred -------------------------cccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcC
Q 047454 69 -------------------------VYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLV 123 (339)
Q Consensus 69 -------------------------~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~ 123 (339)
....+.+|.|.||+|+.+|..++.++|++.+. .++.+|.+|+||||.|+..|
T Consensus 166 iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~---~~~~~D~dgWtPlHAAA~Wg 242 (527)
T KOG0505|consen 166 IEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGY---SVNIKDYDGWTPLHAAAHWG 242 (527)
T ss_pred HHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhcc---CcccccccCCCcccHHHHhh
Confidence 22345568899999999999999999999875 46777999999999999988
Q ss_pred CCCCcchhhhhhhHhhhHHHHHHhhc--chhHHHhhc-CCCCcchhchH
Q 047454 124 PSSEVAGAALQMQRKLEWFKAVENLV--HPFLREAVN-NEQTPREVFTE 169 (339)
Q Consensus 124 ~~~~v~~~~l~~~~~l~~~~~v~~~~--~~~~~~~~n-~g~tp~dl~~~ 169 (339)
..+ +.+++ +....++.+ .|+||.|++.+
T Consensus 243 ~~~------------------~~elL~~~ga~~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 243 QED------------------ACELLVEHGADMDAKTKMGETPLDVADE 273 (527)
T ss_pred hHh------------------HHHHHHHhhcccchhhhcCCCCccchhh
Confidence 831 11111 122345666 99999999876
No 53
>PHA02795 ankyrin-like protein; Provisional
Probab=99.24 E-value=2.9e-11 Score=116.61 Aligned_cols=129 Identities=15% Similarity=-0.042 Sum_probs=98.3
Q ss_pred HHHHHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccc-----cCCCchHhhHHHHcCChHHH
Q 047454 19 QAVEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWE-----DENKHTIFHVAVLHRRAEVF 92 (339)
Q Consensus 19 ~a~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~-----d~~G~t~LH~A~~~~~~~iv 92 (339)
.-.++++.|++++ +.+. .++.||+|.|+..|+.++++.|++.+.+..+.. +..|.|++|.|+.+++.+++
T Consensus 129 n~~eiV~~LI~~GADIn~----~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIv 204 (437)
T PHA02795 129 VEIDIVDFMVDHGAVIYK----IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIY 204 (437)
T ss_pred CCHHHHHHHHHCCCCCCC----CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHH
Confidence 3458999999986 5543 345899999999999999999999985433322 23478999999999999999
Q ss_pred HHHHcccCccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 93 NLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 93 ~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
++|++.|+ .++.+|.+|+||||+|+..|+.+ .++.++. ....+..+ .|.||+..+.+.
T Consensus 205 e~LIs~GA---DIN~kD~~G~TpLh~Aa~~g~~e-----------------iVelLL~~GAdIN~~d~~G~TpLh~Aa~~ 264 (437)
T PHA02795 205 KLCIPYIE---DINQLDAGGRTLLYRAIYAGYID-----------------LVSWLLENGANVNAVMSNGYTCLDVAVDR 264 (437)
T ss_pred HHHHhCcC---CcCcCCCCCCCHHHHHHHcCCHH-----------------HHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence 99999986 36667999999999999999841 2222221 12345566 999999987654
Q ss_pred H
Q 047454 171 H 171 (339)
Q Consensus 171 ~ 171 (339)
.
T Consensus 265 g 265 (437)
T PHA02795 265 G 265 (437)
T ss_pred C
Confidence 3
No 54
>PHA02946 ankyin-like protein; Provisional
Probab=99.23 E-value=3e-11 Score=118.64 Aligned_cols=81 Identities=10% Similarity=0.110 Sum_probs=47.8
Q ss_pred cccCCcHHHHHHHCCc--HHHHHHHHHHCCCCcccccCCCchHhhHHHHcC--ChHHHHHHHcccCccccccccccCCCc
Q 047454 39 QQLLKKAFFKAATLGI--SKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHR--RAEVFNLIYSSTFKSNWLGSNDNIRNN 114 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~--~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~--~~~iv~~Ll~~~~~~~~~~~~D~~GnT 114 (339)
|..|+||||+|+..++ .++++.|++.+.+. +.+|.+|+||||+|+.++ +.+++++|++ ++ .++.+|.+|+|
T Consensus 170 d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadi-n~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-ga---din~~d~~G~T 244 (446)
T PHA02946 170 DKFGKNHIHRHLMSDNPKASTISWMMKLGISP-SKPDHDGNTPLHIVCSKTVKNVDIINLLLP-ST---DVNKQNKFGDS 244 (446)
T ss_pred CCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CC---CCCCCCCCCCC
Confidence 5566666666554333 45666666655443 345666666666666654 5566666664 32 24445666667
Q ss_pred hHHHhhhcCC
Q 047454 115 ILHFGGKLVP 124 (339)
Q Consensus 115 pLHlA~~~~~ 124 (339)
|||+|+..++
T Consensus 245 pLh~A~~~~~ 254 (446)
T PHA02946 245 PLTLLIKTLS 254 (446)
T ss_pred HHHHHHHhCC
Confidence 7766666655
No 55
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.22 E-value=1.9e-09 Score=108.14 Aligned_cols=81 Identities=16% Similarity=0.076 Sum_probs=68.7
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCc--------ccccC--------------CCchHhhHHHHcCChHHHHHHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSV--------YWEDE--------------NKHTIFHVAVLHRRAEVFNLIY 96 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~--------~~~d~--------------~G~t~LH~A~~~~~~~iv~~Ll 96 (339)
...|.||||+|..+.+.+.|+.|++.++|.- ...|. -|+.||-+||+.++.+++++|+
T Consensus 181 eY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl 260 (782)
T KOG3676|consen 181 EYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL 260 (782)
T ss_pred hhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence 5679999999999999999999999876541 11111 3788999999999999999999
Q ss_pred cccCccccccccccCCCchHHHhhhc
Q 047454 97 SSTFKSNWLGSNDNIRNNILHFGGKL 122 (339)
Q Consensus 97 ~~~~~~~~~~~~D~~GnTpLHlA~~~ 122 (339)
+.++ +++.+|..|||.||..+..
T Consensus 261 ~~gA---d~~aqDS~GNTVLH~lVi~ 283 (782)
T KOG3676|consen 261 AHGA---DPNAQDSNGNTVLHMLVIH 283 (782)
T ss_pred hcCC---CCCccccCCChHHHHHHHH
Confidence 9876 4788899999999998876
No 56
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.21 E-value=5e-11 Score=122.23 Aligned_cols=96 Identities=7% Similarity=-0.107 Sum_probs=81.4
Q ss_pred HHHHHHHhccCCCCccc-cccCCcHHHHHHH--CCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCC--hHHHHHHH
Q 047454 22 EIVRIICKGVIWNDPQN-QQLLKKAFFKAAT--LGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRR--AEVFNLIY 96 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~-d~~g~tpLh~Aa~--~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~--~~iv~~Ll 96 (339)
++++.|++.+..|.+.. |.+|.||||.|+. .|+.++++.|++.+++. +.+|.+|+||||+|+.+|+ .+++++|+
T Consensus 156 eiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADV-N~kD~~G~TPLH~Aa~~g~~~~eIVklLL 234 (764)
T PHA02716 156 DLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNV-NLQNNHLITPLHTYLITGNVCASVIKKII 234 (764)
T ss_pred HHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence 78999998854677766 8889999999865 46789999999988764 5689999999999999995 48999999
Q ss_pred cccCccccccccccCCCchHHHhhh
Q 047454 97 SSTFKSNWLGSNDNIRNNILHFGGK 121 (339)
Q Consensus 97 ~~~~~~~~~~~~D~~GnTpLHlA~~ 121 (339)
+.|++ ++.+|.+|+||||.|+.
T Consensus 235 e~GAD---VN~kD~~G~TPLh~Ai~ 256 (764)
T PHA02716 235 ELGGD---MDMKCVNGMSPIMTYII 256 (764)
T ss_pred HcCCC---CCCCCCCCCCHHHHHHH
Confidence 99873 66679999999998864
No 57
>PHA02917 ankyrin-like protein; Provisional
Probab=99.18 E-value=7.2e-11 Score=120.85 Aligned_cols=100 Identities=14% Similarity=0.120 Sum_probs=80.2
Q ss_pred HHHHHHHHhcc-CCCCccccccCCcHHHHH--HHCCcHHHHHHHHHHCCCCcc--cccCCC-----------chHhhHHH
Q 047454 21 VEIVRIICKGV-IWNDPQNQQLLKKAFFKA--ATLGISKFVQEIIAAYKGSVY--WEDENK-----------HTIFHVAV 84 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~d~~g~tpLh~A--a~~G~~~iv~~Ll~~~p~~~~--~~d~~G-----------~t~LH~A~ 84 (339)
.++++.|++.+ +.+.. |.+|+||||.| +.+|+.++++.|++.+.+... ..|..| +||||+|+
T Consensus 116 ~e~vk~Ll~~Gadin~~--d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~ 193 (661)
T PHA02917 116 VDLIKVLVEHGFDLSVK--CENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYI 193 (661)
T ss_pred HHHHHHHHHcCCCCCcc--CCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHH
Confidence 47889998885 55544 89999999964 468999999999999876532 112233 69999998
Q ss_pred H-----------cCChHHHHHHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 85 L-----------HRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 85 ~-----------~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
. +++.+++++|++.|+ .++.+|.+|+||||+|+..|+.
T Consensus 194 ~~~~~~~~~~~~~~~~eiv~~Li~~Ga---dvn~~d~~G~TpLh~A~~~g~~ 242 (661)
T PHA02917 194 ISHLYSESDTRAYVRPEVVKCLINHGI---KPSSIDKNYCTALQYYIKSSHI 242 (661)
T ss_pred hhcccccccccccCcHHHHHHHHHCCC---CcccCCCCCCcHHHHHHHcCCC
Confidence 6 468899999999986 3666799999999999999985
No 58
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.16 E-value=1.4e-10 Score=99.81 Aligned_cols=119 Identities=10% Similarity=-0.007 Sum_probs=91.7
Q ss_pred CccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCc
Q 047454 35 DPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNN 114 (339)
Q Consensus 35 ~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnT 114 (339)
.+..|+.|.|||.||+..|+.++|+.|++.+++. ....+...++|.+|+..|..++|++|+.++. .+|..|.+|-|
T Consensus 153 VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp-~~lgk~resALsLAt~ggytdiV~lLL~r~v---dVNvyDwNGgT 228 (296)
T KOG0502|consen 153 VNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADP-DALGKYRESALSLATRGGYTDIVELLLTREV---DVNVYDWNGGT 228 (296)
T ss_pred ccCccccCchHhHHHHhcCchHHHHHHHHcCCCh-hhhhhhhhhhHhHHhcCChHHHHHHHHhcCC---CcceeccCCCc
Confidence 3444999999999999999999999999988764 3356778999999999999999999999874 35555999999
Q ss_pred hHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcch-hHHHhhc-CCCCcchhchHHHHHH
Q 047454 115 ILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVHP-FLREAVN-NEQTPREVFTEEHKEL 174 (339)
Q Consensus 115 pLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~~-~~~~~~n-~g~tp~dl~~~~~~~l 174 (339)
||-+|++-++.+ -+|.++.. .+..... .|.++.|++.....+.
T Consensus 229 pLlyAvrgnhvk-----------------cve~Ll~sGAd~t~e~dsGy~~mdlAValGyr~ 273 (296)
T KOG0502|consen 229 PLLYAVRGNHVK-----------------CVESLLNSGADVTQEDDSGYWIMDLAVALGYRI 273 (296)
T ss_pred eeeeeecCChHH-----------------HHHHHHhcCCCcccccccCCcHHHHHHHhhhHH
Confidence 999999998842 33333322 2334445 7888888876544333
No 59
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.15 E-value=3.7e-11 Score=83.26 Aligned_cols=50 Identities=18% Similarity=0.145 Sum_probs=30.6
Q ss_pred CCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHH
Q 047454 33 WNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVA 83 (339)
Q Consensus 33 ~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A 83 (339)
.+.+..|.+|.||||+||+.|+.+++++|++.+ ...+.+|.+|+||||+|
T Consensus 7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g-~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNG-ADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp --TT---TTS--HHHHHHHHT-HHHHHHHHHCT---TT---TTS--HHHH-
T ss_pred CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCc-CCCCCCcCCCCCHHHhC
Confidence 455555999999999999999999999999554 44577999999999997
No 60
>PHA02730 ankyrin-like protein; Provisional
Probab=99.15 E-value=2.4e-10 Score=115.42 Aligned_cols=100 Identities=10% Similarity=0.057 Sum_probs=80.0
Q ss_pred HHHHHHHHHhcc-CCCCccccccCCcHHHHHHHCCc----HHHHHHHHHHCCC-CcccccCCCchHhhH---HHHcC---
Q 047454 20 AVEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGI----SKFVQEIIAAYKG-SVYWEDENKHTIFHV---AVLHR--- 87 (339)
Q Consensus 20 a~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~----~~iv~~Ll~~~p~-~~~~~d~~G~t~LH~---A~~~~--- 87 (339)
..++++.|++.+ +.+. +.+|.||||+|+..++ .++++.|++.+.+ .++.+|.+|+||||. |...+
T Consensus 358 ~ieIvelLIs~GAdIN~---k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~ 434 (672)
T PHA02730 358 SIPILRCMLDNGATMDK---TTDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGY 434 (672)
T ss_pred cHHHHHHHHHCCCCCCc---CCCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccc
Confidence 358899999987 6654 3689999999999885 8999999998764 356688999999994 33332
Q ss_pred ------ChHHHHHHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 88 ------RAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 88 ------~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
..+++++|++.|+ .++.+|..|+||||+|+..++.
T Consensus 435 ~~~e~~~~~ivk~LIs~GA---DINakD~~G~TPLh~Aa~~~~~ 475 (672)
T PHA02730 435 HCYETILIDVFDILSKYMD---DIDMIDNENKTLLYYAVDVNNI 475 (672)
T ss_pred cccchhHHHHHHHHHhccc---chhccCCCCCCHHHHHHHhCCH
Confidence 2357999999986 3777799999999999998873
No 61
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.09 E-value=2.8e-10 Score=104.41 Aligned_cols=101 Identities=17% Similarity=0.097 Sum_probs=82.8
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
+++|+.|.+.++++.+. ...|.|+|++|+.+|+.++++.||..+++. +.+|.+|-|+|+.|+++||.+++++|+..+.
T Consensus 320 ~~vV~~LF~mgnVNaKA-sQ~gQTALMLAVSHGr~d~vk~LLacgAdV-NiQDdDGSTALMCA~EHGhkEivklLLA~p~ 397 (452)
T KOG0514|consen 320 RTVVERLFKMGDVNAKA-SQHGQTALMLAVSHGRVDMVKALLACGADV-NIQDDDGSTALMCAAEHGHKEIVKLLLAVPS 397 (452)
T ss_pred HHHHHHHHhccCcchhh-hhhcchhhhhhhhcCcHHHHHHHHHccCCC-ccccCCccHHHhhhhhhChHHHHHHHhccCc
Confidence 46677776665444332 467999999999999999999999877764 6699999999999999999999999998753
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
. .....|.||.|+|.+|-..||.
T Consensus 398 c--d~sLtD~DgSTAl~IAleagh~ 420 (452)
T KOG0514|consen 398 C--DISLTDVDGSTALSIALEAGHR 420 (452)
T ss_pred c--cceeecCCCchhhhhHHhcCch
Confidence 1 2223399999999999999995
No 62
>PHA02730 ankyrin-like protein; Provisional
Probab=99.09 E-value=3.7e-10 Score=114.02 Aligned_cols=99 Identities=11% Similarity=0.001 Sum_probs=78.2
Q ss_pred HHHHHHHHHhcc-CCCCccccccCCcHHHHHHHCC---cHHHHHHHHHHCCCCcccccCCCchHhhHHHHcC--ChHHHH
Q 047454 20 AVEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLG---ISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHR--RAEVFN 93 (339)
Q Consensus 20 a~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G---~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~--~~~iv~ 93 (339)
+...++..++.- +.+ +..|.+|+||||+|+.+| +.++++.|++.+++. +.+|.+|+||||+|+..+ +.++++
T Consensus 19 ~~~~~~~~~~~~~~in-~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdi-n~kD~~G~TPLh~Aa~~~~~~~eIv~ 96 (672)
T PHA02730 19 TYKKIKLEIETCHNLS-KHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVER-LCRNNEGLTPLGVYSKRKYVKSQIVH 96 (672)
T ss_pred hHHHHHHHHHHhcchh-hhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCC-cccCCCCCChHHHHHHcCCCcHHHHH
Confidence 334555555553 443 344889999999999997 599999999998875 468999999999999977 799999
Q ss_pred HHHcccCccccccccccCCCchHHHhhh
Q 047454 94 LIYSSTFKSNWLGSNDNIRNNILHFGGK 121 (339)
Q Consensus 94 ~Ll~~~~~~~~~~~~D~~GnTpLHlA~~ 121 (339)
+|++.+++. .....|+.|++|||.+..
T Consensus 97 ~Ll~~~~~~-~~~~~~~~~d~~l~~y~~ 123 (672)
T PHA02730 97 LLISSYSNA-SNELTSNINDFDLYSYMS 123 (672)
T ss_pred HHHhcCCCC-CcccccccCCchHHHHHH
Confidence 999997532 233358889999999988
No 63
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.08 E-value=5.1e-10 Score=97.89 Aligned_cols=99 Identities=17% Similarity=0.089 Sum_probs=75.4
Q ss_pred HHHHHHhccCCCCccccccCCcHHHHHHHCCc-----HHHHHHHHHHCC--CCcccccCCCchHhhHHHHcCChHHHHHH
Q 047454 23 IVRIICKGVIWNDPQNQQLLKKAFFKAATLGI-----SKFVQEIIAAYK--GSVYWEDENKHTIFHVAVLHRRAEVFNLI 95 (339)
Q Consensus 23 iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~-----~~iv~~Ll~~~p--~~~~~~d~~G~t~LH~A~~~~~~~iv~~L 95 (339)
.++.+... +.+.+..|.+|.||||+|+..|+ .++++.|++.+. +.....|.+|+||||+|+..|+.++++++
T Consensus 88 ~~~~l~~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~l 166 (235)
T COG0666 88 IVKLLLAS-GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELL 166 (235)
T ss_pred HHHHHHHc-CCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHH
Confidence 33444444 34444458888888888888888 888888888887 56676788888888888888888888888
Q ss_pred HcccCccccccccccCCCchHHHhhhcCCC
Q 047454 96 YSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 96 l~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
++.++ ....+|..|.|++|.|...++.
T Consensus 167 l~~~~---~~~~~~~~g~t~l~~a~~~~~~ 193 (235)
T COG0666 167 LEAGA---DPNSRNSYGVTALDPAAKNGRI 193 (235)
T ss_pred HhcCC---CCcccccCCCcchhhhcccchH
Confidence 88865 3444578888888888888874
No 64
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.04 E-value=9.7e-10 Score=87.05 Aligned_cols=82 Identities=17% Similarity=0.164 Sum_probs=70.3
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHF 118 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHl 118 (339)
|.+|.||||.|++.|+.++++.|++.+++. ...|..|.||||.|+..+..++++++++.+. ..+..|..|.||+|.
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~-~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~---~~~~~~~~~~~~l~~ 79 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA---DVNARDKDGNTPLHL 79 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCC---CccccCCCCCCHHHH
Confidence 567999999999999999999999888765 5578899999999999999999999999874 233447889999999
Q ss_pred hhhcCC
Q 047454 119 GGKLVP 124 (339)
Q Consensus 119 A~~~~~ 124 (339)
|+..++
T Consensus 80 a~~~~~ 85 (126)
T cd00204 80 AARNGN 85 (126)
T ss_pred HHHcCc
Confidence 999887
No 65
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.04 E-value=4.6e-10 Score=100.17 Aligned_cols=93 Identities=15% Similarity=0.063 Sum_probs=77.3
Q ss_pred HHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 22 EIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 22 ~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.+++-|++++ ..+.. +....||||+||..||.++|+.|+++..|. +.++..|.||||+||-.|+..+.+-|+..|+
T Consensus 48 aivemll~rgarvn~t--nmgddtplhlaaahghrdivqkll~~kadv-navnehgntplhyacfwgydqiaedli~~ga 124 (448)
T KOG0195|consen 48 AIVEMLLSRGARVNST--NMGDDTPLHLAAAHGHRDIVQKLLSRKADV-NAVNEHGNTPLHYACFWGYDQIAEDLISCGA 124 (448)
T ss_pred HHHHHHHhcccccccc--cCCCCcchhhhhhcccHHHHHHHHHHhccc-chhhccCCCchhhhhhhcHHHHHHHHHhccc
Confidence 4677777776 55544 444569999999999999999999998774 6699999999999999999999999999986
Q ss_pred ccccccccccCCCchHHHhh
Q 047454 101 KSNWLGSNDNIRNNILHFGG 120 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~ 120 (339)
.++.-+++|.|||.-|-
T Consensus 125 ---~v~icnk~g~tpldkak 141 (448)
T KOG0195|consen 125 ---AVNICNKKGMTPLDKAK 141 (448)
T ss_pred ---eeeecccCCCCchhhhc
Confidence 34444899999998764
No 66
>PHA02917 ankyrin-like protein; Provisional
Probab=99.04 E-value=8.9e-10 Score=112.90 Aligned_cols=98 Identities=11% Similarity=-0.005 Sum_probs=75.4
Q ss_pred HHHHHHhccCCCCccccccCCcHHHHHHHCC-----------------------cHHHHHHHHHHCCCCcccccCCCchH
Q 047454 23 IVRIICKGVIWNDPQNQQLLKKAFFKAATLG-----------------------ISKFVQEIIAAYKGSVYWEDENKHTI 79 (339)
Q Consensus 23 iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G-----------------------~~~iv~~Ll~~~p~~~~~~d~~G~t~ 79 (339)
+++.|+.+.+.+....+.+|+||||.|++.+ +.++++.|++.+++. +.+|..|+||
T Consensus 377 ~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdI-N~kd~~G~Tp 455 (661)
T PHA02917 377 TMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDI-NMIDKRGETL 455 (661)
T ss_pred HHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCC-CCCCCCCcCH
Confidence 4555554322222223567999999987543 356779999988875 5689999999
Q ss_pred hhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhh-cCC
Q 047454 80 FHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGK-LVP 124 (339)
Q Consensus 80 LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~-~~~ 124 (339)
||+|+..++.+++++|++.|+ .++.+|..|+||||+|+. .++
T Consensus 456 Lh~Aa~~~~~~~v~~Ll~~GA---din~~d~~G~T~L~~A~~~~~~ 498 (661)
T PHA02917 456 LHKAVRYNKQSLVSLLLESGS---DVNIRSNNGYTCIAIAINESRN 498 (661)
T ss_pred HHHHHHcCCHHHHHHHHHCcC---CCCCCCCCCCCHHHHHHHhCCC
Confidence 999999999999999999986 366679999999999996 444
No 67
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.02 E-value=4.7e-10 Score=117.86 Aligned_cols=92 Identities=15% Similarity=0.082 Sum_probs=73.0
Q ss_pred CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCC--------------------------------CCcccccCCCchH
Q 047454 32 IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYK--------------------------------GSVYWEDENKHTI 79 (339)
Q Consensus 32 ~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p--------------------------------~~~~~~d~~G~t~ 79 (339)
+.+.+....+|.||||+|++.||.++++.+++..+ ..+..++.+|.||
T Consensus 464 g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~Tp 543 (1143)
T KOG4177|consen 464 GADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTP 543 (1143)
T ss_pred CCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccch
Confidence 44445446777777777777777777777776431 1145577888999
Q ss_pred hhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCCCC
Q 047454 80 FHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPSS 126 (339)
Q Consensus 80 LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~~ 126 (339)
||.|+.+|+.++|++|+++++ .++++|+.|.||||.|+..|+.+
T Consensus 544 Lh~A~~~g~v~~VkfLLe~gA---dv~ak~~~G~TPLH~Aa~~G~~~ 587 (1143)
T KOG4177|consen 544 LHVAVHYGNVDLVKFLLEHGA---DVNAKDKLGYTPLHQAAQQGHND 587 (1143)
T ss_pred HHHHHhcCCchHHHHhhhCCc---cccccCCCCCChhhHHHHcChHH
Confidence 999999999999999999987 47788999999999999999853
No 68
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.00 E-value=4.8e-10 Score=96.52 Aligned_cols=106 Identities=13% Similarity=0.046 Sum_probs=87.8
Q ss_pred HHhhhhhHHHHHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChH
Q 047454 11 HKEKVRNMQAVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAE 90 (339)
Q Consensus 11 ~~~~~~~~~a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~ 90 (339)
.+..++|++ .|+.|++. +.|++...+...++|.+|++.|+.++|+.|+.+.++. +..|-+|-|||-+|++.++.+
T Consensus 166 WAaa~G~i~---vV~fLL~~-GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdV-NvyDwNGgTpLlyAvrgnhvk 240 (296)
T KOG0502|consen 166 WAAAKGHIP---VVQFLLNS-GADPDALGKYRESALSLATRGGYTDIVELLLTREVDV-NVYDWNGGTPLLYAVRGNHVK 240 (296)
T ss_pred HHHhcCchH---HHHHHHHc-CCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCc-ceeccCCCceeeeeecCChHH
Confidence 344455544 45566666 4445545667789999999999999999999999986 558999999999999999999
Q ss_pred HHHHHHcccCccccccccccCCCchHHHhhhcCC
Q 047454 91 VFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 91 iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
+++.|+..|++ ++..|..|++++.+|+..|+
T Consensus 241 cve~Ll~sGAd---~t~e~dsGy~~mdlAValGy 271 (296)
T KOG0502|consen 241 CVESLLNSGAD---VTQEDDSGYWIMDLAVALGY 271 (296)
T ss_pred HHHHHHhcCCC---cccccccCCcHHHHHHHhhh
Confidence 99999999973 55559999999999999998
No 69
>PHA02792 ankyrin-like protein; Provisional
Probab=98.98 E-value=7.8e-10 Score=110.68 Aligned_cols=100 Identities=10% Similarity=0.038 Sum_probs=82.9
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHH-CCcHHHHHHHHHHCCCC-------------------------------
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAAT-LGISKFVQEIIAAYKGS------------------------------- 68 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~-~G~~~iv~~Ll~~~p~~------------------------------- 68 (339)
.++++.|++++ .|.+..+.+|.||+|+|+. +|+.|+++.|++.+.+.
T Consensus 85 lElvk~LI~~G-AdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 163 (631)
T PHA02792 85 IELLKLLISKG-LEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYD 163 (631)
T ss_pred HHHHHHHHHcC-CCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccc
Confidence 48899999985 4444557779999999965 79999999999988651
Q ss_pred ----cccccCCCchHhhHHHHcC-------ChHHHHHHHcccCccccccccccCCCchHHHhhhcCC
Q 047454 69 ----VYWEDENKHTIFHVAVLHR-------RAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 69 ----~~~~d~~G~t~LH~A~~~~-------~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
.+..|..|+||||+|+.++ +.+++++|+++|+ .++.+|..|.||||.|+...+
T Consensus 164 ~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~---~~~~~d~~g~t~l~~~~~~~~ 227 (631)
T PHA02792 164 YDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEK---EMRYYTYREHTTLYYYVDKCD 227 (631)
T ss_pred cccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCC---CcCccCCCCChHHHHHHHccc
Confidence 2234667999999999999 8999999999986 366679999999999999984
No 70
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.97 E-value=5.7e-09 Score=82.56 Aligned_cols=98 Identities=17% Similarity=0.167 Sum_probs=82.0
Q ss_pred HHHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 21 VEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.++++.+++.. .. ...+..|.||+|.|+..++.++++.|++.++. .+..|..|.||+|+|+..++.+++++|++.+
T Consensus 20 ~~~i~~li~~~~~~--~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~ 96 (126)
T cd00204 20 LEVVKLLLENGADV--NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD-VNARDKDGNTPLHLAARNGNLDVVKLLLKHG 96 (126)
T ss_pred HHHHHHHHHcCCCC--CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 37788888775 33 33488999999999999999999999998764 3557789999999999999999999999986
Q ss_pred CccccccccccCCCchHHHhhhcCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
. .....|..|.||+|.|...++
T Consensus 97 ~---~~~~~~~~~~~~l~~~~~~~~ 118 (126)
T cd00204 97 A---DVNARDKDGRTPLHLAAKNGH 118 (126)
T ss_pred C---CCcccCCCCCCHHHHHHhcCC
Confidence 3 244458999999999999865
No 71
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.96 E-value=3.7e-10 Score=112.05 Aligned_cols=110 Identities=13% Similarity=0.020 Sum_probs=88.2
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHF 118 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHl 118 (339)
|.+|.|+||.|+-+|+.++++.|++..+- .+..|.+|.+|||+|+++|+.+++++++..+. .+|....+|.||||+
T Consensus 46 d~~gfTalhha~Lng~~~is~llle~ea~-ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d---~~na~~~e~~tplhl 121 (854)
T KOG0507|consen 46 DYSGFTLLHHAVLNGQNQISKLLLDYEAL-LDLCDTKGILPLHLAAWNGNLEIVKMLLLQTD---ILNAVNIENETPLHL 121 (854)
T ss_pred CccchhHHHHHHhcCchHHHHHHhcchhh-hhhhhccCcceEEehhhcCcchHHHHHHhccc---CCCcccccCcCccch
Confidence 88999999999999999999999988654 45678999999999999999999999998862 577778899999999
Q ss_pred hhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchH
Q 047454 119 GGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTE 169 (339)
Q Consensus 119 A~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~ 169 (339)
|++.||.+.+ ..++. ....-++| .++|++|++.+
T Consensus 122 aaqhgh~dvv-----------------~~Ll~~~adp~i~nns~~t~ldlA~q 157 (854)
T KOG0507|consen 122 AAQHGHLEVV-----------------FYLLKKNADPFIRNNSKETVLDLASR 157 (854)
T ss_pred hhhhcchHHH-----------------HHHHhcCCCccccCcccccHHHHHHH
Confidence 9999996322 11111 11133566 88888888655
No 72
>PHA02792 ankyrin-like protein; Provisional
Probab=98.95 E-value=2.3e-09 Score=107.38 Aligned_cols=96 Identities=7% Similarity=0.016 Sum_probs=77.4
Q ss_pred HHHHHHHHHhcc-CCCCcccccc--CCcHHHHHHHCCcHH---HHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHH
Q 047454 20 AVEIVRIICKGV-IWNDPQNQQL--LKKAFFKAATLGISK---FVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFN 93 (339)
Q Consensus 20 a~~iv~~L~~~~-~~~~~~~d~~--g~tpLh~Aa~~G~~~---iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~ 93 (339)
..++++.|++.+ +.+.. |.+ +.||||.|+..+..+ +++.+++.+++. +.+|..|+||||+|+..++.++++
T Consensus 351 n~eIVelLIs~GADIN~k--D~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADI-N~kD~~G~TPLh~Aa~~~n~eive 427 (631)
T PHA02792 351 DPKVVEYILKNGNVVVED--DDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDI-NKIDKHGRSILYYCIESHSVSLVE 427 (631)
T ss_pred CHHHHHHHHHcCCchhhh--cCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcc-ccccccCcchHHHHHHcCCHHHHH
Confidence 358888888886 54443 544 569999988776654 577788887764 568999999999999999999999
Q ss_pred HHHcccCccccccccccCCCchHHHhhh
Q 047454 94 LIYSSTFKSNWLGSNDNIRNNILHFGGK 121 (339)
Q Consensus 94 ~Ll~~~~~~~~~~~~D~~GnTpLHlA~~ 121 (339)
+|++.|+ .++.+|..|+||||+|+.
T Consensus 428 lLLs~GA---DIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 428 WLIDNGA---DINITTKYGSTCIGICVI 452 (631)
T ss_pred HHHHCCC---CCCCcCCCCCCHHHHHHH
Confidence 9999986 366669999999999986
No 73
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=98.94 E-value=2.1e-09 Score=80.40 Aligned_cols=80 Identities=13% Similarity=0.027 Sum_probs=65.1
Q ss_pred CCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCC
Q 047454 33 WNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIR 112 (339)
Q Consensus 33 ~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~G 112 (339)
.|.++. ..|++|||+||..|..+++++|+..+++. ...|+.|-|||.-|+..||.++|++|+++|+++ ..+..+|
T Consensus 26 ~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i-~~kDKygITPLLsAvwEGH~~cVklLL~~GAdr---t~~~PdG 100 (117)
T KOG4214|consen 26 LNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANI-QDKDKYGITPLLSAVWEGHRDCVKLLLQNGADR---TIHAPDG 100 (117)
T ss_pred ccHHHH-hCCcccchHhhhcchHHHHHHHHHhcccc-CCccccCCcHHHHHHHHhhHHHHHHHHHcCccc---ceeCCCc
Confidence 444433 47899999999999999999999998875 558999999999999999999999999999743 2235667
Q ss_pred CchHH
Q 047454 113 NNILH 117 (339)
Q Consensus 113 nTpLH 117 (339)
.+.+.
T Consensus 101 ~~~~e 105 (117)
T KOG4214|consen 101 TALIE 105 (117)
T ss_pred hhHHh
Confidence 66554
No 74
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.93 E-value=1.2e-07 Score=99.16 Aligned_cols=105 Identities=17% Similarity=0.097 Sum_probs=78.3
Q ss_pred HHHHHHHHhcc-CCCCcc------------ccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcC
Q 047454 21 VEIVRIICKGV-IWNDPQ------------NQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHR 87 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~------------~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~ 87 (339)
.++++.|++++ +.+... ....|.||||.|+..|+.++++.|++.+++ ++..|+.|+||||+|+.++
T Consensus 141 ~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gad-in~~d~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 141 YEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPAD-ILTADSLGNTLLHLLVMEN 219 (743)
T ss_pred HHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcc-hhhHhhhhhHHHHHHHhhh
Confidence 57888889887 554321 124689999999999999999999987654 5668999999999999987
Q ss_pred ---------ChHHHHHHHcccCcc---ccc-cccccCCCchHHHhhhcCCCC
Q 047454 88 ---------RAEVFNLIYSSTFKS---NWL-GSNDNIRNNILHFGGKLVPSS 126 (339)
Q Consensus 88 ---------~~~iv~~Ll~~~~~~---~~~-~~~D~~GnTpLHlA~~~~~~~ 126 (339)
..++.+++++.++.. ..+ +..|.+|+||||+|+..|+.+
T Consensus 220 ~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~ 271 (743)
T TIGR00870 220 EFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIV 271 (743)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCcc
Confidence 234556666554321 112 333899999999999999853
No 75
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.92 E-value=4.4e-09 Score=108.21 Aligned_cols=77 Identities=12% Similarity=0.039 Sum_probs=59.8
Q ss_pred HHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCC
Q 047454 45 AFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 45 pLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
+||.|+..|+.+.++.|++.+++. +.+|.+|+||||+|+.+|+.+++++|++.|++ ++.+|.+|+||||+|+..++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadi-n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad---vn~~d~~G~TpLh~A~~~g~ 160 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADP-NCRDYDGRTPLHIACANGHVQVVRVLLEFGAD---PTLLDKDGKTPLELAEENGF 160 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHCCc
Confidence 477888888888888888776654 45778888888888888888888888888753 45558888888888888776
Q ss_pred C
Q 047454 125 S 125 (339)
Q Consensus 125 ~ 125 (339)
.
T Consensus 161 ~ 161 (664)
T PTZ00322 161 R 161 (664)
T ss_pred H
Confidence 4
No 76
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.91 E-value=1.6e-09 Score=74.40 Aligned_cols=47 Identities=19% Similarity=0.166 Sum_probs=37.0
Q ss_pred CchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 76 KHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 76 G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
|+||||+|+..|+.+++++|++.+. .++.+|.+|+||||.|+..|+.
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~---din~~d~~g~t~lh~A~~~g~~ 47 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGA---DINAQDEDGRTPLHYAAKNGNI 47 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTS---GTT-B-TTS--HHHHHHHTT-H
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHccCH
Confidence 7899999999999999999999875 3666699999999999999984
No 77
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=98.89 E-value=3.2e-09 Score=88.33 Aligned_cols=78 Identities=19% Similarity=0.095 Sum_probs=71.5
Q ss_pred HHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCC
Q 047454 45 AFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 45 pLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
-+-+|+..+....|+.||+..|+.++.+|.+|-||||-|+.+|+.++++.|+..+++ ..++.++|.||||-|++..+
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn---~~a~T~~GWTPLhSAckWnN 142 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN---KEAKTNEGWTPLHSACKWNN 142 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCC---cccccccCccchhhhhcccc
Confidence 356899999999999999999999999999999999999999999999999998863 55668999999999999988
Q ss_pred C
Q 047454 125 S 125 (339)
Q Consensus 125 ~ 125 (339)
.
T Consensus 143 ~ 143 (228)
T KOG0512|consen 143 F 143 (228)
T ss_pred h
Confidence 5
No 78
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.87 E-value=1.1e-08 Score=105.21 Aligned_cols=98 Identities=12% Similarity=-0.017 Sum_probs=76.1
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
+.++.|++.. .+.+..|.+|+||||+|+.+|+.++++.|++.+++. +.+|.+|+||||+|+.+++.+++++|++.+..
T Consensus 96 ~~vk~LL~~G-adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~ 173 (664)
T PTZ00322 96 VGARILLTGG-ADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADP-TLLDKDGKTPLELAEENGFREVVQLLSRHSQC 173 (664)
T ss_pred HHHHHHHHCC-CCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCc
Confidence 4567777664 444445899999999999999999999999998765 56899999999999999999999999987210
Q ss_pred ----cccccccccCCCchHHHhhh
Q 047454 102 ----SNWLGSNDNIRNNILHFGGK 121 (339)
Q Consensus 102 ----~~~~~~~D~~GnTpLHlA~~ 121 (339)
.......+.+|++|+-.+..
T Consensus 174 ~~~~ga~~~~~~~~g~~~~~~~~~ 197 (664)
T PTZ00322 174 HFELGANAKPDSFTGKPPSLEDSP 197 (664)
T ss_pred ccccCCCCCccccCCCCccchhhh
Confidence 11233336777777766653
No 79
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.87 E-value=1.6e-09 Score=107.66 Aligned_cols=98 Identities=13% Similarity=0.097 Sum_probs=83.7
Q ss_pred HHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 22 EIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 22 ~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
++.+.|++.- -++.. |.+|.+|||+||+.|+.++++.++... +..+..+..|.||||.||++|+.+++.+|++.++
T Consensus 63 ~is~llle~ea~ldl~--d~kg~~plhlaaw~g~~e~vkmll~q~-d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~a 139 (854)
T KOG0507|consen 63 QISKLLLDYEALLDLC--DTKGILPLHLAAWNGNLEIVKMLLLQT-DILNAVNIENETPLHLAAQHGHLEVVFYLLKKNA 139 (854)
T ss_pred HHHHHHhcchhhhhhh--hccCcceEEehhhcCcchHHHHHHhcc-cCCCcccccCcCccchhhhhcchHHHHHHHhcCC
Confidence 5666666654 44444 789999999999999999999999876 6667788899999999999999999999999987
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ .-.+|+.+.|+|.+|++.|..
T Consensus 140 d---p~i~nns~~t~ldlA~qfgr~ 161 (854)
T KOG0507|consen 140 D---PFIRNNSKETVLDLASRFGRA 161 (854)
T ss_pred C---ccccCcccccHHHHHHHhhhh
Confidence 4 344589999999999999985
No 80
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.86 E-value=4.8e-09 Score=100.32 Aligned_cols=60 Identities=17% Similarity=0.075 Sum_probs=31.9
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
+.+|-|+||-|+..||.+||+.|++.+.+. +..|++||||||+|+.+++..+++.|.+.|
T Consensus 580 NdEGITaLHNAiCaghyeIVkFLi~~ganV-Na~DSdGWTPLHCAASCNnv~~ckqLVe~G 639 (752)
T KOG0515|consen 580 NDEGITALHNAICAGHYEIVKFLIEFGANV-NAADSDGWTPLHCAASCNNVPMCKQLVESG 639 (752)
T ss_pred CccchhHHhhhhhcchhHHHHHHHhcCCcc-cCccCCCCchhhhhhhcCchHHHHHHHhcc
Confidence 445555555555555555555555554442 335555555555555555555555555554
No 81
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.84 E-value=1.9e-08 Score=87.86 Aligned_cols=86 Identities=21% Similarity=0.167 Sum_probs=75.9
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCC-----hHHHHHHHcccCccccccccccCCC
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRR-----AEVFNLIYSSTFKSNWLGSNDNIRN 113 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~-----~~iv~~Ll~~~~~~~~~~~~D~~Gn 113 (339)
+..+.+++|.++..|..++++.++..+.+. +.+|..|.||||+|+.+++ .+++++|++.+++.+....+|.+|+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~ 148 (235)
T COG0666 70 DLDGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGN 148 (235)
T ss_pred CccccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCC
Confidence 666899999999999999999999998887 7799999999999999999 9999999999852123444499999
Q ss_pred chHHHhhhcCCC
Q 047454 114 NILHFGGKLVPS 125 (339)
Q Consensus 114 TpLHlA~~~~~~ 125 (339)
||||+|+..|+.
T Consensus 149 tpl~~A~~~~~~ 160 (235)
T COG0666 149 TPLHWAALNGDA 160 (235)
T ss_pred chhHHHHHcCch
Confidence 999999999984
No 82
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.77 E-value=1.3e-08 Score=90.90 Aligned_cols=91 Identities=12% Similarity=0.030 Sum_probs=80.7
Q ss_pred CccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCc
Q 047454 35 DPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNN 114 (339)
Q Consensus 35 ~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnT 114 (339)
.+.+|.+|++||..|+.+|+.+.++.+++.+.|.....+..+-||||.|+..|+.++.++|++.|++...+ +.-|.|
T Consensus 38 vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~v---NsvgrT 114 (396)
T KOG1710|consen 38 VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLV---NSVGRT 114 (396)
T ss_pred hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccc---cchhhh
Confidence 34559999999999999999999999999999988888999999999999999999999999999754333 578999
Q ss_pred hHHHhhhcCCCCCc
Q 047454 115 ILHFGGKLVPSSEV 128 (339)
Q Consensus 115 pLHlA~~~~~~~~v 128 (339)
+-.+|+..|+.+++
T Consensus 115 AaqmAAFVG~H~CV 128 (396)
T KOG1710|consen 115 AAQMAAFVGHHECV 128 (396)
T ss_pred HHHHHHHhcchHHH
Confidence 99999999997543
No 83
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.73 E-value=1.7e-08 Score=96.60 Aligned_cols=76 Identities=18% Similarity=0.132 Sum_probs=65.8
Q ss_pred HHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 46 FFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 46 Lh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
|.-|+-.|..|+|+.++..--| ....|+.|-|+||-|++.||.+||++|++.|+ .+|..|.+|+||||+|+...+.
T Consensus 554 LLDaaLeGEldlVq~~i~ev~D-pSqpNdEGITaLHNAiCaghyeIVkFLi~~ga---nVNa~DSdGWTPLHCAASCNnv 629 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTD-PSQPNDEGITALHNAICAGHYEIVKFLIEFGA---NVNAADSDGWTPLHCAASCNNV 629 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcC-CCCCCccchhHHhhhhhcchhHHHHHHHhcCC---cccCccCCCCchhhhhhhcCch
Confidence 3459999999999998876433 24578899999999999999999999999986 5777899999999999998874
No 84
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=98.68 E-value=4.1e-08 Score=73.52 Aligned_cols=77 Identities=12% Similarity=-0.085 Sum_probs=65.2
Q ss_pred cHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcC
Q 047454 44 KAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLV 123 (339)
Q Consensus 44 tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~ 123 (339)
--+.|+.++|..+-|+..+..+-+. + .-..||+|||+|+-.|+.+++++|+..|+ .+..+|+.|-|||--|+..|
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nV-n-~~~ggR~plhyAAD~GQl~ilefli~iGA---~i~~kDKygITPLLsAvwEG 78 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNV-N-EIYGGRTPLHYAADYGQLSILEFLISIGA---NIQDKDKYGITPLLSAVWEG 78 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccH-H-HHhCCcccchHhhhcchHHHHHHHHHhcc---ccCCccccCCcHHHHHHHHh
Confidence 3467899999999999988776333 2 23489999999999999999999999986 36666999999999999999
Q ss_pred CC
Q 047454 124 PS 125 (339)
Q Consensus 124 ~~ 125 (339)
|.
T Consensus 79 H~ 80 (117)
T KOG4214|consen 79 HR 80 (117)
T ss_pred hH
Confidence 95
No 85
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.54 E-value=1.9e-07 Score=89.90 Aligned_cols=81 Identities=14% Similarity=0.126 Sum_probs=70.5
Q ss_pred ccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHH
Q 047454 38 NQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILH 117 (339)
Q Consensus 38 ~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLH 117 (339)
.+..|.|.||.|+.+|+.++.+.|++.+.+. +.+|.+||||||.|+..|+.++.++|+.++++ +......|.||+.
T Consensus 194 ~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~-~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~---~d~~t~~g~~p~d 269 (527)
T KOG0505|consen 194 RHARGATALHVAAANGYTEVAALLLQAGYSV-NIKDYDGWTPLHAAAHWGQEDACELLVEHGAD---MDAKTKMGETPLD 269 (527)
T ss_pred cccccchHHHHHHhhhHHHHHHHHHHhccCc-ccccccCCCcccHHHHhhhHhHHHHHHHhhcc---cchhhhcCCCCcc
Confidence 3556999999999999999999999987654 56999999999999999999999999999863 4445789999999
Q ss_pred Hhhhc
Q 047454 118 FGGKL 122 (339)
Q Consensus 118 lA~~~ 122 (339)
+|...
T Consensus 270 v~dee 274 (527)
T KOG0505|consen 270 VADEE 274 (527)
T ss_pred chhhh
Confidence 98764
No 86
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.44 E-value=3.3e-07 Score=92.32 Aligned_cols=103 Identities=19% Similarity=0.168 Sum_probs=83.3
Q ss_pred HHHHHHHHhcc-CCCCccc-------cc--------------cCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCch
Q 047454 21 VEIVRIICKGV-IWNDPQN-------QQ--------------LLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHT 78 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~-------d~--------------~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t 78 (339)
.++|+.|++.+ +++.... |. -|..||.+||.-+..|+++.|++..+| .+.+|++|+|
T Consensus 197 ~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd-~~aqDS~GNT 275 (782)
T KOG3676|consen 197 AELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGAD-PNAQDSNGNT 275 (782)
T ss_pred HHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCC-CCccccCCCh
Confidence 47888888876 4433211 21 367899999999999999999997666 4669999999
Q ss_pred HhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 79 IFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 79 ~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.||.-+.+-..++.+++++.+++ ....-++++|-|||-+|++.|..
T Consensus 276 VLH~lVi~~~~~My~~~L~~ga~-~l~~v~N~qgLTPLtLAaklGk~ 321 (782)
T KOG3676|consen 276 VLHMLVIHFVTEMYDLALELGAN-ALEHVRNNQGLTPLTLAAKLGKK 321 (782)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC-ccccccccCCCChHHHHHHhhhH
Confidence 99999999999999999999874 22333389999999999999984
No 87
>PF13606 Ank_3: Ankyrin repeat
Probab=98.35 E-value=5e-07 Score=53.98 Aligned_cols=27 Identities=15% Similarity=0.049 Sum_probs=19.3
Q ss_pred cCCcHHHHHHHCCcHHHHHHHHHHCCC
Q 047454 41 LLKKAFFKAATLGISKFVQEIIAAYKG 67 (339)
Q Consensus 41 ~g~tpLh~Aa~~G~~~iv~~Ll~~~p~ 67 (339)
+|+||||+||+.|+.|++++|++.+++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gad 27 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGAD 27 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 467777777777777777777776554
No 88
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.30 E-value=4.5e-07 Score=86.11 Aligned_cols=84 Identities=14% Similarity=0.051 Sum_probs=71.5
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHF 118 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHl 118 (339)
+.++.-++.+||+.|.+..++.+.-.+.| ++.+|.+.||+||+|+..|+.+++++|++.. +.....+|.+|+|||.-
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D-~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~--kv~~~~kDRw~rtPlDd 579 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMD-LETKDYDDRTALHVAAAEGHVEVVKFLLNAC--KVDPDPKDRWGRTPLDD 579 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhccc-ccccccccchhheeecccCceeHHHHHHHHH--cCCCChhhccCCCcchH
Confidence 45567889999999999999887765555 4678999999999999999999999999875 33455569999999999
Q ss_pred hhhcCCC
Q 047454 119 GGKLVPS 125 (339)
Q Consensus 119 A~~~~~~ 125 (339)
|...+|.
T Consensus 580 A~~F~h~ 586 (622)
T KOG0506|consen 580 AKHFKHK 586 (622)
T ss_pred hHhcCcH
Confidence 9999984
No 89
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.20 E-value=2.2e-06 Score=83.04 Aligned_cols=85 Identities=18% Similarity=0.090 Sum_probs=74.9
Q ss_pred ccccCCcHHHHHHHCCcHHHHHHHHHHCCC-CcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchH
Q 047454 38 NQQLLKKAFFKAATLGISKFVQEIIAAYKG-SVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNIL 116 (339)
Q Consensus 38 ~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~-~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpL 116 (339)
.+.+..+.||+|++.|+-|+|+++++++|. .....|..|+|+||-|+..++..+.++|.+.|+ .+...|..|.||-
T Consensus 895 ~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdaga---sl~ktd~kg~tp~ 971 (1004)
T KOG0782|consen 895 QGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGA---SLRKTDSKGKTPQ 971 (1004)
T ss_pred eCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcch---hheecccCCCChH
Confidence 377788999999999999999999999986 455678999999999999999999999999985 3444499999999
Q ss_pred HHhhhcCCC
Q 047454 117 HFGGKLVPS 125 (339)
Q Consensus 117 HlA~~~~~~ 125 (339)
.-|.+.|++
T Consensus 972 eraqqa~d~ 980 (1004)
T KOG0782|consen 972 ERAQQAGDP 980 (1004)
T ss_pred HHHHhcCCc
Confidence 999998885
No 90
>PF13606 Ank_3: Ankyrin repeat
Probab=98.16 E-value=2.2e-06 Score=51.20 Aligned_cols=27 Identities=19% Similarity=0.263 Sum_probs=25.0
Q ss_pred CCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 75 NKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 75 ~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
+|+||||+|+.+|+.+++++|++.+++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gad 27 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGAD 27 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 589999999999999999999999853
No 91
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.15 E-value=3.2e-06 Score=51.60 Aligned_cols=27 Identities=15% Similarity=0.048 Sum_probs=18.4
Q ss_pred cCCcHHHHHHHCCcHHHHHHHHHHCCC
Q 047454 41 LLKKAFFKAATLGISKFVQEIIAAYKG 67 (339)
Q Consensus 41 ~g~tpLh~Aa~~G~~~iv~~Ll~~~p~ 67 (339)
+|+||||+|++.|+.++++.|++.+.+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~ 27 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGAD 27 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCC
Confidence 466777777777777777777766554
No 92
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.09 E-value=7.2e-06 Score=78.42 Aligned_cols=80 Identities=13% Similarity=0.101 Sum_probs=71.6
Q ss_pred CcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhc
Q 047454 43 KKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKL 122 (339)
Q Consensus 43 ~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~ 122 (339)
..-||..++.|+.+..-.||..+++....-..+|.||||+|++.|+...+++|+-.|++ +...|.+|.||+.+|-..
T Consensus 134 srQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD---~~a~d~~GmtP~~~AR~~ 210 (669)
T KOG0818|consen 134 SKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGAD---PGAQDSSGMTPVDYARQG 210 (669)
T ss_pred HHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCC---CCCCCCCCCcHHHHHHhc
Confidence 45689999999999999999998887776678999999999999999999999999874 666799999999999999
Q ss_pred CCC
Q 047454 123 VPS 125 (339)
Q Consensus 123 ~~~ 125 (339)
||.
T Consensus 211 gH~ 213 (669)
T KOG0818|consen 211 GHH 213 (669)
T ss_pred Cch
Confidence 885
No 93
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.07 E-value=2.7e-06 Score=85.70 Aligned_cols=83 Identities=17% Similarity=0.157 Sum_probs=72.8
Q ss_pred cccccCCcHHHHHHHCCcHHHHHHHHHHCCCCccccc-CCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCch
Q 047454 37 QNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWED-ENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNI 115 (339)
Q Consensus 37 ~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d-~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTp 115 (339)
..|.-|+|+||+|+..|..++++.|++++.+... +| ..|+||||-|...|+.+++..|++.|. .+..+|++|..|
T Consensus 47 ikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~v-qD~ESG~taLHRaiyyG~idca~lLL~~g~---SL~i~Dkeglsp 122 (1267)
T KOG0783|consen 47 IKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFV-QDEESGYTALHRAIYYGNIDCASLLLSKGR---SLRIKDKEGLSP 122 (1267)
T ss_pred HHHhhccceeeeeeccchhHHHHHHHhcCceeee-ccccccchHhhHhhhhchHHHHHHHHhcCC---ceEEecccCCCH
Confidence 3389999999999999999999999999877655 55 589999999999999999999999984 466679999999
Q ss_pred HHHhhhcC
Q 047454 116 LHFGGKLV 123 (339)
Q Consensus 116 LHlA~~~~ 123 (339)
|.+-.+..
T Consensus 123 lq~~~r~~ 130 (1267)
T KOG0783|consen 123 LQFLSRVL 130 (1267)
T ss_pred HHHHhhcc
Confidence 99888743
No 94
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.05 E-value=5.8e-06 Score=50.42 Aligned_cols=27 Identities=15% Similarity=0.261 Sum_probs=25.2
Q ss_pred CCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 75 NKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 75 ~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
+|+||||+|+.+|+.+++++|++.+++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~ 27 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGAD 27 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCC
Confidence 599999999999999999999999864
No 95
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.02 E-value=1.1e-05 Score=78.06 Aligned_cols=77 Identities=17% Similarity=0.053 Sum_probs=37.9
Q ss_pred HHHHHHCCcHHHHHHHHHH-CCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCC
Q 047454 46 FFKAATLGISKFVQEIIAA-YKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 46 Lh~Aa~~G~~~iv~~Ll~~-~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
+|+++.....+-++..+.. -...+..+|..|+||||+|+.-|+.+.++.|+..+++ +..+|++|++|||.|+..|+
T Consensus 24 lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad---v~~kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 24 LHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD---VSIKNNEGWSPLHEAVSTGN 100 (560)
T ss_pred cchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC---ccccccccccHHHHHHHcCC
Confidence 5555555544444332222 1223344455555555555555555555555555431 33335555555555555555
Q ss_pred C
Q 047454 125 S 125 (339)
Q Consensus 125 ~ 125 (339)
.
T Consensus 101 ~ 101 (560)
T KOG0522|consen 101 E 101 (560)
T ss_pred H
Confidence 3
No 96
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.00 E-value=6.9e-06 Score=85.14 Aligned_cols=84 Identities=11% Similarity=0.084 Sum_probs=74.3
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCcccccccc-ccCCCchHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSN-DNIRNNILH 117 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~-D~~GnTpLH 117 (339)
..+-.|+|-+||..||.|+++.|+.++.+ ++.+|++|-+||.+|+-.||..+|+.|++..+ .+..+ |+.+.|+|-
T Consensus 754 e~n~~t~LT~acaggh~e~vellv~rgan-iehrdkkgf~plImaatagh~tvV~~llk~ha---~veaQsdrtkdt~lS 829 (2131)
T KOG4369|consen 754 EPNIKTNLTSACAGGHREEVELLVVRGAN-IEHRDKKGFVPLIMAATAGHITVVQDLLKAHA---DVEAQSDRTKDTMLS 829 (2131)
T ss_pred CccccccccccccCccHHHHHHHHHhccc-ccccccccchhhhhhcccCchHHHHHHHhhhh---hhhhhcccccCceEE
Confidence 34568999999999999999999998766 57799999999999999999999999999864 46666 999999999
Q ss_pred HhhhcCCCC
Q 047454 118 FGGKLVPSS 126 (339)
Q Consensus 118 lA~~~~~~~ 126 (339)
+|+.-|+.+
T Consensus 830 lacsggr~~ 838 (2131)
T KOG4369|consen 830 LACSGGRTR 838 (2131)
T ss_pred EecCCCcch
Confidence 999999863
No 97
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.00 E-value=1.6e-05 Score=77.38 Aligned_cols=61 Identities=16% Similarity=0.036 Sum_probs=54.5
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
+.+|+|+||+||+.|++.+.+.|+-.+.|. ..+|.+|+|+|.+|-..|..+++..|+..|.
T Consensus 658 ~~~grt~LHLa~~~gnVvl~QLLiWyg~dv-~~rda~g~t~l~yar~a~sqec~d~llq~gc 718 (749)
T KOG0705|consen 658 EGDGRTALHLAARKGNVVLAQLLIWYGVDV-MARDAHGRTALFYARQAGSQECIDVLLQYGC 718 (749)
T ss_pred CCCCcchhhhhhhhcchhHHHHHHHhCccc-eecccCCchhhhhHhhcccHHHHHHHHHcCC
Confidence 788899999999999999999999777765 4489999999999999999999999999875
No 98
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.97 E-value=1.7e-05 Score=76.68 Aligned_cols=64 Identities=11% Similarity=0.090 Sum_probs=54.7
Q ss_pred CCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcc
Q 047454 34 NDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSS 98 (339)
Q Consensus 34 ~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~ 98 (339)
..+..|..|+||||+|+..|+.+.++.|+..+++. ..+|.+||+|||-|+..|+.+++..++.+
T Consensus 47 ~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv-~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 47 VIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADV-SIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred eeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCc-cccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 34444888999999999999999999999998764 55899999999999999999877666643
No 99
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=97.92 E-value=2.4e-05 Score=70.34 Aligned_cols=80 Identities=10% Similarity=0.083 Sum_probs=70.4
Q ss_pred CCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCcccccccc-ccCCCchHHHhh
Q 047454 42 LKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSN-DNIRNNILHFGG 120 (339)
Q Consensus 42 g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~-D~~GnTpLHlA~ 120 (339)
-..||.-+..+|.++-...|++.- .-++.+|..|.++|..|+.+|+.+.++.+++.|+| +|.. +..+.||||.|+
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~v-r~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaD---vN~~qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTV-RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGAD---VNDKQHGTLYTPLMFAA 87 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHh-hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCC---cCcccccccccHHHHHH
Confidence 358999999999999999999763 33567999999999999999999999999999874 5555 999999999999
Q ss_pred hcCCC
Q 047454 121 KLVPS 125 (339)
Q Consensus 121 ~~~~~ 125 (339)
..|+.
T Consensus 88 LSGn~ 92 (396)
T KOG1710|consen 88 LSGNQ 92 (396)
T ss_pred HcCCc
Confidence 99996
No 100
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.86 E-value=1e-05 Score=77.04 Aligned_cols=68 Identities=19% Similarity=0.063 Sum_probs=60.8
Q ss_pred CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 32 IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 32 ~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
+.|.+..|.+.+|+||.||..|++++++.|++.+......+|..|+|||--|...+|.+++++|-+..
T Consensus 529 g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 529 GMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred cccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHh
Confidence 45555569999999999999999999999999987777789999999999999999999999997753
No 101
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.75 E-value=2.5e-05 Score=81.04 Aligned_cols=110 Identities=14% Similarity=-0.013 Sum_probs=84.2
Q ss_pred HHhhhhhHHHHHHHHHHHhcc--CCCCc--cccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHc
Q 047454 11 HKEKVRNMQAVEIVRIICKGV--IWNDP--QNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLH 86 (339)
Q Consensus 11 ~~~~~~~~~a~~iv~~L~~~~--~~~~~--~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~ 86 (339)
..+..++....+.+..+.... +.+.+ ..-..|.|+||.|+..|..-.++.|++.+.+ ++.+|..|+||||.+...
T Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~ 699 (785)
T KOG0521|consen 621 KELLVKASSDGECLPRIATALAHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATAS 699 (785)
T ss_pred HHHHHHhccCccchhhhhhhhcchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhh
Confidence 344444444444444444443 22221 1246689999999999999999999998877 688999999999999999
Q ss_pred CChHHHHHHHcccCccccccccccCCCchHHHhhhcCC
Q 047454 87 RRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 87 ~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
|+...+..+++++++ .+..|.+|.+||++|....+
T Consensus 700 g~~~~~~~ll~~~a~---~~a~~~~~~~~l~~a~~~~~ 734 (785)
T KOG0521|consen 700 GHTSIACLLLKRGAD---PNAFDPDGKLPLDIAMEAAN 734 (785)
T ss_pred cccchhhhhcccccc---ccccCccCcchhhHHhhhcc
Confidence 999999999998864 45559999999999988754
No 102
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.70 E-value=5.8e-05 Score=73.43 Aligned_cols=76 Identities=14% Similarity=0.042 Sum_probs=57.7
Q ss_pred HHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCcccccccc-ccCCCchHHHhhhcCCC
Q 047454 47 FKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSN-DNIRNNILHFGGKLVPS 125 (339)
Q Consensus 47 h~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~-D~~GnTpLHlA~~~~~~ 125 (339)
..|+..+..--+++.-..+.+. ..++.+.++.||+|+..|+.++|+|+++++. ..+..+ |..|.|.||-|+..++.
T Consensus 871 l~av~~~D~~klqE~h~~gg~l-l~~~~~~~sllh~a~~tg~~eivkyildh~p--~elld~~de~get~lhkaa~~~~r 947 (1004)
T KOG0782|consen 871 LRAVLSSDLMKLQETHLNGGSL-LIQGPDHCSLLHYAAKTGNGEIVKYILDHGP--SELLDMADETGETALHKAACQRNR 947 (1004)
T ss_pred HHHHHhccHHHHHHHHhcCCce-EeeCcchhhHHHHHHhcCChHHHHHHHhcCC--HHHHHHHhhhhhHHHHHHHHhcch
Confidence 4455555544444444444444 4488899999999999999999999999984 345555 99999999999998873
No 103
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.69 E-value=0.0001 Score=62.66 Aligned_cols=87 Identities=11% Similarity=-0.005 Sum_probs=68.2
Q ss_pred CCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCC
Q 047454 34 NDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRN 113 (339)
Q Consensus 34 ~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~Gn 113 (339)
+.+..|.-||||++.||..|..+.+.+|+.++...+..+|..|.+++.+|-+.|+.++++.|.+...+.+...+ ..+++
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~n-ss~~e 82 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPMN-SSRDE 82 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCccc-CCCCC
Confidence 45666999999999999999999999999998777788999999999999999999999999887421111111 34555
Q ss_pred chHHHhhh
Q 047454 114 NILHFGGK 121 (339)
Q Consensus 114 TpLHlA~~ 121 (339)
++..+-..
T Consensus 83 ~lfyCE~C 90 (223)
T KOG2384|consen 83 ALFYCEVC 90 (223)
T ss_pred ccchhhhh
Confidence 65554443
No 104
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.64 E-value=3.5e-05 Score=80.10 Aligned_cols=101 Identities=18% Similarity=0.100 Sum_probs=81.4
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.++.++ .+...+|..|.+||.+|+-.||..+|+.|++.+.+.....|..+.|+|-+||-.|+.++|++|+..++
T Consensus 770 ~e~vellv~rg-aniehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~ga 848 (2131)
T KOG4369|consen 770 REEVELLVVRG-ANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGA 848 (2131)
T ss_pred HHHHHHHHHhc-ccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhc
Confidence 36777777774 33444499999999999999999999999999988877789999999999999999999999999875
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.+ -.++-...|||-+|..-|..
T Consensus 849 nk---ehrnvsDytPlsla~Sggy~ 870 (2131)
T KOG4369|consen 849 NK---EHRNVSDYTPLSLARSGGYT 870 (2131)
T ss_pred cc---cccchhhcCchhhhcCcchH
Confidence 32 22345667888888776654
No 105
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.49 E-value=7.4e-05 Score=77.61 Aligned_cols=87 Identities=9% Similarity=-0.070 Sum_probs=62.8
Q ss_pred ccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccc---cccCCCc
Q 047454 38 NQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGS---NDNIRNN 114 (339)
Q Consensus 38 ~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~---~D~~GnT 114 (339)
+|.+|.--+|. |..|+.+..-+++..+...++.+|.+||||||+|+..|+..++..|++.++++..+.. .+..|.|
T Consensus 604 ld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~t 682 (975)
T KOG0520|consen 604 LDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKT 682 (975)
T ss_pred hcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCc
Confidence 36666666666 5555556666666666666778889999999999999999999888877654433222 2567888
Q ss_pred hHHHhhhcCCC
Q 047454 115 ILHFGGKLVPS 125 (339)
Q Consensus 115 pLHlA~~~~~~ 125 (339)
+-.+|..+|+.
T Consensus 683 a~~la~s~g~~ 693 (975)
T KOG0520|consen 683 AADLARANGHK 693 (975)
T ss_pred hhhhhhccccc
Confidence 88888888874
No 106
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.45 E-value=0.00031 Score=67.54 Aligned_cols=65 Identities=11% Similarity=-0.122 Sum_probs=54.3
Q ss_pred CCCCccc-cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHc
Q 047454 32 IWNDPQN-QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYS 97 (339)
Q Consensus 32 ~~~~~~~-d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~ 97 (339)
+.+.+-. -+.|.||||.||+.|..--++.|+-+++|. ...|.+|.||+-+|-..||.++.+.|++
T Consensus 156 GA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~-~a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 156 GAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADP-GAQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred ccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCC-CCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 4555555 467999999999999999999998888775 4589999999999999999887766655
No 107
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.34 E-value=0.00062 Score=66.62 Aligned_cols=114 Identities=14% Similarity=0.101 Sum_probs=75.5
Q ss_pred hhhHHHHHhhhhhHHHHHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCC--Cc-ccccCCCchHhh
Q 047454 5 PSIKVIHKEKVRNMQAVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKG--SV-YWEDENKHTIFH 81 (339)
Q Consensus 5 ~~~~~i~~~~~~~~~a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~--~~-~~~d~~G~t~LH 81 (339)
|+.+.-.+.|++-+-+.---+..+.-+ ...+..-..-|-.|....++..+-.||.++.. .. ...+.+|+|+||
T Consensus 591 Ps~~s~REEkErwIr~KYeqklFLaPl----~~te~~lgqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LH 666 (749)
T KOG0705|consen 591 PSPDSSREEKERWIRAKYEQKLFLAPL----PCTEEPLGQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALH 666 (749)
T ss_pred CCccccHHHHHHHHHHHHHHHhhcCCC----CCCCCchHHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhh
Confidence 455555666666655543333333322 10011112345667777777777777765421 22 224678999999
Q ss_pred HHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 82 VAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 82 ~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+|+..|+....++|+-.+. .+..+|..|+|+|.+|-+.|..
T Consensus 667 La~~~gnVvl~QLLiWyg~---dv~~rda~g~t~l~yar~a~sq 707 (749)
T KOG0705|consen 667 LAARKGNVVLAQLLIWYGV---DVMARDAHGRTALFYARQAGSQ 707 (749)
T ss_pred hhhhhcchhHHHHHHHhCc---cceecccCCchhhhhHhhcccH
Confidence 9999999999999998875 3666799999999999998874
No 108
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=96.98 E-value=0.00033 Score=71.23 Aligned_cols=72 Identities=10% Similarity=-0.002 Sum_probs=58.3
Q ss_pred CcHHHHH-HHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCcccccccc-ccCCCchHHHhhhcCCCCC
Q 047454 53 GISKFVQ-EIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSN-DNIRNNILHFGGKLVPSSE 127 (339)
Q Consensus 53 G~~~iv~-~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~-D~~GnTpLHlA~~~~~~~~ 127 (339)
|...-++ .+-+.|...++..|..|||+||+|+..++..+++.|+++|. .++-+ -..|.||||-|...|+.++
T Consensus 28 s~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGi---dv~vqD~ESG~taLHRaiyyG~idc 101 (1267)
T KOG0783|consen 28 SEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGI---DVFVQDEESGYTALHRAIYYGNIDC 101 (1267)
T ss_pred CChhHHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCc---eeeeccccccchHhhHhhhhchHHH
Confidence 4443344 44466778888999999999999999999999999999985 35666 4679999999999999643
No 109
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=96.79 E-value=0.00081 Score=70.10 Aligned_cols=83 Identities=14% Similarity=-0.021 Sum_probs=64.7
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHH-CCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAA-YKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILH 117 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~-~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLH 117 (339)
.-.|++-+|+++..|+...++.+++. +-. ....|.+|...+|+ |..++.+..-+++... ...+.-+|..|+||||
T Consensus 571 ~~r~~lllhL~a~~lyawLie~~~e~~~~~-~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~--~~ai~i~D~~G~tpL~ 646 (975)
T KOG0520|consen 571 NFRDMLLLHLLAELLYAWLIEKVIEWAGSG-DLELDRDGQGVIHF-CAALGYEWAFLPISAD--GVAIDIRDRNGWTPLH 646 (975)
T ss_pred CCcchHHHHHHHHHhHHHHHHHHhcccccC-chhhcccCCChhhH-hhhcCCceeEEEEeec--ccccccccCCCCcccc
Confidence 56789999999999999999999986 322 23367888889999 5556666666666554 2246666999999999
Q ss_pred HhhhcCCC
Q 047454 118 FGGKLVPS 125 (339)
Q Consensus 118 lA~~~~~~ 125 (339)
+|+..|+.
T Consensus 647 wAa~~G~e 654 (975)
T KOG0520|consen 647 WAAFRGRE 654 (975)
T ss_pred hHhhcCHH
Confidence 99999984
No 110
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.55 E-value=0.0045 Score=58.00 Aligned_cols=57 Identities=16% Similarity=0.102 Sum_probs=49.2
Q ss_pred CcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 43 KKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 43 ~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.--|..||+.|..+.++.|++.+- .++.+|.-...||.+|+..||.+++++|+++|+
T Consensus 37 f~elceacR~GD~d~v~~LVetgv-nVN~vD~fD~spL~lAsLcGHe~vvklLLenGA 93 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGV-NVNAVDRFDSSPLYLASLCGHEDVVKLLLENGA 93 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCC-CcchhhcccccHHHHHHHcCcHHHHHHHHHcCC
Confidence 345788999999999999999654 457789999999999999999999999999986
No 111
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.46 E-value=0.0047 Score=34.48 Aligned_cols=27 Identities=15% Similarity=0.026 Sum_probs=20.1
Q ss_pred cCCcHHHHHHHCCcHHHHHHHHHHCCC
Q 047454 41 LLKKAFFKAATLGISKFVQEIIAAYKG 67 (339)
Q Consensus 41 ~g~tpLh~Aa~~G~~~iv~~Ll~~~p~ 67 (339)
+|.||+|+|+..|+.++++.|++.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 367888888888888888888776543
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=96.10 E-value=0.0078 Score=51.41 Aligned_cols=56 Identities=13% Similarity=0.141 Sum_probs=48.7
Q ss_pred CcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 68 SVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 68 ~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.-|||+|+.|+..|+.+++++|++++. ..+-..|..|++++.+|-+.|..
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~--a~vgv~d~ssldaaqlaek~g~~ 59 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGV--AFVGVTDESSLDAAQLAEKGGAQ 59 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCc--ccccccccccchHHHHHHhcChH
Confidence 356789999999999999999999999999982 24545599999999999999984
No 113
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.26 E-value=3.1 Score=43.39 Aligned_cols=77 Identities=10% Similarity=-0.063 Sum_probs=49.1
Q ss_pred HHHHHhcc---CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCC-------------------------c------
Q 047454 24 VRIICKGV---IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGS-------------------------V------ 69 (339)
Q Consensus 24 v~~L~~~~---~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~-------------------------~------ 69 (339)
|+..++.. .++.+..|.-|+++||+|..+-+.|+++.|++..-+. .
T Consensus 41 V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~ 120 (822)
T KOG3609|consen 41 VAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEEGDALLLAIAVGSVPLVELLLVHFVDAPYLERS 120 (822)
T ss_pred HHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhcccccchhccc
Confidence 45555544 3666666888888888888888888888877653110 0
Q ss_pred ----ccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 70 ----YWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 70 ----~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
...-..+-|||.+||..++.+++++|++.|+
T Consensus 121 ~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~ 155 (822)
T KOG3609|consen 121 GDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH 155 (822)
T ss_pred cccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence 0112335567777777777777777776654
No 114
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=95.04 E-value=0.016 Score=60.55 Aligned_cols=49 Identities=16% Similarity=0.090 Sum_probs=44.1
Q ss_pred CCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 74 ENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 74 ~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
..|.|+||.|+..+....+++|++.++ .++..|..|+||||.+...|+.
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga---~vn~~d~~g~~plh~~~~~g~~ 702 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGA---DVNALDSKGRTPLHHATASGHT 702 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCC---cchhhhccCCCcchhhhhhccc
Confidence 357999999999999999999999986 3666699999999999999995
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=94.90 E-value=0.033 Score=30.74 Aligned_cols=26 Identities=23% Similarity=0.287 Sum_probs=23.4
Q ss_pred CCchHhhHHHHcCChHHHHHHHcccC
Q 047454 75 NKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 75 ~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
+|.||+|+|+..++.++++.+++.+.
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~ 26 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGA 26 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 47899999999999999999998763
No 116
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=93.87 E-value=0.08 Score=51.53 Aligned_cols=45 Identities=18% Similarity=0.134 Sum_probs=33.1
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAV 84 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~ 84 (339)
|.--.|+||+|+..|..+++.++|+..-|. ...|..|+||..++.
T Consensus 427 ~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp-~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 427 DYLTSTFLHYAAAQGARKCVKYFLEEGCDP-STKDGAGRTPYSLSA 471 (591)
T ss_pred ccccchHHHHHHhcchHHHHHHHHHhcCCc-hhcccCCCCcccccc
Confidence 444568888888888888888888776443 336788888888776
No 117
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=92.86 E-value=0.066 Score=55.22 Aligned_cols=57 Identities=18% Similarity=0.234 Sum_probs=48.4
Q ss_pred CcHHHHHHHCCcHHHHHHHHHHCCC---CcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 43 KKAFFKAATLGISKFVQEIIAAYKG---SVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 43 ~tpLh~Aa~~G~~~iv~~Ll~~~p~---~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.--.-.|+++|+...|+..++.... .++.+|.-|+++||+|+.+.+.++.++|++.+
T Consensus 26 e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~ 85 (822)
T KOG3609|consen 26 EKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTS 85 (822)
T ss_pred hHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCc
Confidence 3444679999999999999987654 45678999999999999999999999999874
No 118
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=91.34 E-value=0.42 Score=45.18 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=50.3
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRR 88 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~ 88 (339)
++.|++|++. +.+.+..|+-..+||.+|+-.||.++++.|+++++-| ..-.-+|.-. |+++.+.+
T Consensus 49 ~d~v~~LVet-gvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC-~rdtf~G~RC-~YgaLnd~ 113 (516)
T KOG0511|consen 49 VDRVRYLVET-GVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC-SRDTFDGDRC-HYGALNDR 113 (516)
T ss_pred HHHHHHHHHh-CCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc-cccccCcchh-hhhhhhHH
Confidence 4778888884 6777777888899999999999999999999987654 3233456655 67776654
No 119
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=89.14 E-value=0.53 Score=46.02 Aligned_cols=63 Identities=8% Similarity=0.061 Sum_probs=46.1
Q ss_pred HHHHHHHHHHCCCC-----cccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhh
Q 047454 55 SKFVQEIIAAYKGS-----VYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGG 120 (339)
Q Consensus 55 ~~iv~~Ll~~~p~~-----~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~ 120 (339)
.+.+++|.+..-+. .+..|..--|+||+|+..|..++|.++++.++| .-..|..|.||..++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~D---p~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCD---PSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCC---chhcccCCCCcccccc
Confidence 44556655543222 122344568999999999999999999999864 3345999999999987
No 120
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=79.84 E-value=3.8 Score=29.66 Aligned_cols=47 Identities=13% Similarity=0.127 Sum_probs=39.3
Q ss_pred cHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcc
Q 047454 44 KAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSS 98 (339)
Q Consensus 44 tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~ 98 (339)
..+..|...|+.|+++.+++.. . .| ...+..|+...+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~----~~---~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-K----PD---NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-c----cH---HHHHHHHHHHhhHHHHHHHHHh
Confidence 5678999999999999998754 1 11 4579999999999999999886
No 121
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=78.65 E-value=17 Score=31.84 Aligned_cols=15 Identities=33% Similarity=0.479 Sum_probs=10.9
Q ss_pred HHhhcCCCCcchhch
Q 047454 154 REAVNNEQTPREVFT 168 (339)
Q Consensus 154 ~~~~n~g~tp~dl~~ 168 (339)
.+.+++|+|+.|++.
T Consensus 39 leaQk~G~tA~~lfG 53 (206)
T PF06570_consen 39 LEAQKKGKTARQLFG 53 (206)
T ss_pred HHHHhCCCcHHHHcC
Confidence 344448999999886
No 122
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=74.55 E-value=1.9 Score=37.35 Aligned_cols=52 Identities=17% Similarity=0.093 Sum_probs=38.9
Q ss_pred ccCCCchHhhHHHHcCChHHHH-HHHcccCc-cccccccccCCCchHHHhhhcC
Q 047454 72 EDENKHTIFHVAVLHRRAEVFN-LIYSSTFK-SNWLGSNDNIRNNILHFGGKLV 123 (339)
Q Consensus 72 ~d~~G~t~LH~A~~~~~~~iv~-~Ll~~~~~-~~~~~~~D~~GnTpLHlA~~~~ 123 (339)
.|++-.+|||-|+.-++.+++. |++++.+. +..+|..|.+|..+|.+|....
T Consensus 218 Id~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~ 271 (280)
T KOG4591|consen 218 IDGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCRE 271 (280)
T ss_pred HcCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHH
Confidence 4677789999999999999875 45566543 3334444999999999987653
No 123
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.42 E-value=8 Score=28.58 Aligned_cols=51 Identities=16% Similarity=0.041 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcC
Q 047454 226 IIFAVSDALSLFSSIISVLMFLGILTSRYSEEDFLLSLPRKLIIDLITMFFSIASMMVSFGATIYLVLFS 295 (339)
Q Consensus 226 ~~F~~~nt~a~~~S~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~m~~af~~~~~~vl~~ 295 (339)
-+++++|+.||-.|.... -++++... .|.. . =+..+|.++|.+|+-+.+..
T Consensus 14 pawi~f~waafg~s~~m~--~~gi~~lP---VD~w----~----------KGy~~MG~lfltgSt~tL~K 64 (95)
T COG4298 14 PAWIMFNWAAFGASYFML--GLGIWLLP---VDLW----T----------KGYWAMGILFLTGSTVTLVK 64 (95)
T ss_pred chhHhHHHHHHHHHHHHH--HHHhheec---hHHH----H----------HHHHHHHHHHHhcchhhhhH
Confidence 367889999999999744 34554321 3321 1 23457888999998776653
No 124
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=58.33 E-value=21 Score=30.66 Aligned_cols=45 Identities=20% Similarity=0.217 Sum_probs=30.5
Q ss_pred HHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHc
Q 047454 46 FFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYS 97 (339)
Q Consensus 46 Lh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~ 97 (339)
|..|+.+|-.+.+-+.++.+.+. ..++|-.|+..++.+++.+++.
T Consensus 147 l~~a~~kgll~F~letlkygg~~-------~~~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNV-------DIIVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcc-------cHHHHHHHHHhhHHHHHHHhhc
Confidence 45677777777777777765442 1267777777777777776653
No 125
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=53.85 E-value=28 Score=31.10 Aligned_cols=78 Identities=6% Similarity=-0.023 Sum_probs=49.2
Q ss_pred HHHHHHHhcc---CCCCccccccCCcHHHHH--HHCCcHHHHHHHHHHCC---CCcccccCCCchHhhHHHHcCChHHHH
Q 047454 22 EIVRIICKGV---IWNDPQNQQLLKKAFFKA--ATLGISKFVQEIIAAYK---GSVYWEDENKHTIFHVAVLHRRAEVFN 93 (339)
Q Consensus 22 ~iv~~L~~~~---~~~~~~~d~~g~tpLh~A--a~~G~~~iv~~Ll~~~p---~~~~~~d~~G~t~LH~A~~~~~~~iv~ 93 (339)
.+..+|+... .-|.-+. +.+..-+-++ .-..+..+++++++++- +....+-..|.|-|--|++.+..+++.
T Consensus 193 dva~~lls~f~ft~~dv~~~-~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~ 271 (284)
T PF06128_consen 193 DVALYLLSKFNFTKQDVASM-EKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIA 271 (284)
T ss_pred HHHHHHHhhcceecchhhhc-CcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHH
Confidence 5566666655 2222211 1233333443 33345678888888753 222334567999999999999999999
Q ss_pred HHHcccC
Q 047454 94 LIYSSTF 100 (339)
Q Consensus 94 ~Ll~~~~ 100 (339)
+|++.|+
T Consensus 272 ~Llk~GA 278 (284)
T PF06128_consen 272 FLLKYGA 278 (284)
T ss_pred HHHHcCc
Confidence 9999886
No 126
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=47.44 E-value=13 Score=32.37 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=40.3
Q ss_pred cccCCcHHHHHHHCCcHHHHH-HHHHHC---CCCcccccCCCchHhhHHHHcCC
Q 047454 39 QQLLKKAFFKAATLGISKFVQ-EIIAAY---KGSVYWEDENKHTIFHVAVLHRR 88 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~-~Ll~~~---p~~~~~~d~~G~t~LH~A~~~~~ 88 (339)
|.+-..|||-|.+-|..+++- ++++.+ |...+..|.+|..+|-+|.....
T Consensus 219 d~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~~ 272 (280)
T KOG4591|consen 219 DGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCREL 272 (280)
T ss_pred cCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHHH
Confidence 566678999999999999885 466554 66778889999999999976544
No 127
>KOG4473 consensus Uncharacterized membrane protein [Function unknown]
Probab=43.05 E-value=88 Score=27.68 Aligned_cols=81 Identities=19% Similarity=0.198 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcccccCcchhhhHHHHH-HHHHHHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHH
Q 047454 194 AFIITVMFAAAFTVPGGNDSRGIPNFLHESSFIIFAVSD-ALSLFSSIISVLMFLGILTSRYSEEDFLLSLPRKLIIDLI 272 (339)
Q Consensus 194 ~LIATvtfaa~ft~Pgg~~~~G~~~l~~~~~f~~F~~~n-t~a~~~S~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 272 (339)
.+.|.+|-+.+|++ ||.- |.+ -.+++.| -.....|++++++++.+ ..|....+.++ +++..++.
T Consensus 163 p~qaA~asa~afsl-Gg~v----PLl------~~~fi~~~~~~~v~~vv~~~~aL~~--fG~~ga~lg~a--k~vrs~~r 227 (247)
T KOG4473|consen 163 PLQAAAASALAFSL-GGIV----PLL------PAAFVKDYKVRIVVSVVATTFALFM--FGYVGAHLGKA--KVVRSSVR 227 (247)
T ss_pred hHHHHHHHHHHHHh-ccHH----hhh------HHHhhhhhhhhhhhHHHHHHHHHHH--HHHHHHHhcCC--hhHHHHHH
Confidence 45566777777777 3321 222 2222232 34455566555543322 22333333322 34556777
Q ss_pred HHHHHHHHHHHHHHHHh
Q 047454 273 TMFFSIASMMVSFGATI 289 (339)
Q Consensus 273 ~~~~s~~~m~~af~~~~ 289 (339)
.++++.++|.++|+.+-
T Consensus 228 ~vv~G~lAmaatf~l~K 244 (247)
T KOG4473|consen 228 VVVGGWLAMAATFGLTK 244 (247)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88899999999998763
No 128
>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=42.71 E-value=2.5e+02 Score=25.13 Aligned_cols=21 Identities=10% Similarity=0.053 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 047454 269 IDLITMFFSIASMMVSFGATI 289 (339)
Q Consensus 269 ~~~~~~~~s~~~m~~af~~~~ 289 (339)
-++-.+.+++.++.++|..|.
T Consensus 211 ~~l~~~~~G~~aa~vsy~iG~ 231 (234)
T cd02433 211 SALRQLAIGGGAAAVTYLLGL 231 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 456667788888888887774
No 129
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=42.13 E-value=53 Score=24.91 Aligned_cols=47 Identities=21% Similarity=0.231 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhcCCcceeehhhHHHHHHHHHHHHHhhhhhHHH
Q 047454 271 LITMFFSIASMMVSFGATIYLVLFSTWKWVFIPITLVGCVPVTLFALLQFPLLFD 325 (339)
Q Consensus 271 ~~~~~~s~~~m~~af~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (339)
+.+++.++.+.+..|+.- ..+|+.+ ++..+|+...+..+.-||+|.+
T Consensus 30 ~ilti~aiVg~i~Gf~~Q-------qls~tvy-~vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 30 LILTIGAIVGFIYGFAQQ-------QLSVTVY-IVGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred HHHHHHHHHHHHHHHHHH-------HHHHHHH-HHHHHHHHHHHhcCCCchhhhc
Confidence 345566666655555543 2345443 5666777777777788888876
No 130
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=40.47 E-value=54 Score=23.81 Aligned_cols=44 Identities=18% Similarity=0.243 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHhHHhhcCCcceeehhhHHHHHHHHHHHHHhhhhhHHH
Q 047454 274 MFFSIASMMVSFGATIYLVLFSTWKWVFIPITLVGCVPVTLFALLQFPLLFD 325 (339)
Q Consensus 274 ~~~s~~~m~~af~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (339)
...++.+.++.|.+..+ + ..+.+++.+++...+..+..||.|.+
T Consensus 18 ~~~~iisfi~Gy~~q~~-------~-~~~~~~~~g~~~~~lv~vP~Wp~y~r 61 (76)
T PF06645_consen 18 IISAIISFIVGYITQSF-------S-YTFYIYGAGVVLTLLVVVPPWPFYNR 61 (76)
T ss_pred HHHHHHHHHHHHHHHHH-------H-HHHHHHHHHHHHHHhheeCCcHhhcC
Confidence 34555566666665544 1 22334555555555566667777654
No 131
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=39.55 E-value=2.4e+02 Score=24.03 Aligned_cols=35 Identities=11% Similarity=0.102 Sum_probs=23.2
Q ss_pred CCcceeehhhHHHHHHHHHHHHHhhhhhHHHHHHh
Q 047454 295 STWKWVFIPITLVGCVPVTLFALLQFPLLFDMYSS 329 (339)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (339)
-+.+-+.+..+++=.+.++.|.+..+|.=.+-+++
T Consensus 131 ~ks~iLtllf~ilq~laliwYslSyiP~g~~gv~~ 165 (175)
T KOG2887|consen 131 LKSKILTLLFCILQVLALIWYSLSYIPFGRSGVSK 165 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHH
Confidence 34444555556667777788888888886665543
No 132
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=35.58 E-value=1.8e+02 Score=24.93 Aligned_cols=22 Identities=5% Similarity=0.286 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHhHHhhcC
Q 047454 274 MFFSIASMMVSFGATIYLVLFS 295 (339)
Q Consensus 274 ~~~s~~~m~~af~~~~~~vl~~ 295 (339)
+++.+-++++|||..+..+=+.
T Consensus 91 ~llP~PsLVIaYCl~mqi~~~~ 112 (189)
T PF05313_consen 91 LLLPFPSLVIAYCLSMQIYNPG 112 (189)
T ss_pred HHcCccHHHHHHHHHheeecCC
Confidence 3344456677777776655443
No 133
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=35.35 E-value=1.5e+02 Score=25.51 Aligned_cols=31 Identities=29% Similarity=0.498 Sum_probs=22.6
Q ss_pred hhHHHHHHHHHHHHHHHHHH-HHHHhcccccc
Q 047454 226 IIFAVSDALSLFSSIISVLM-FLGILTSRYSE 256 (339)
Q Consensus 226 ~~F~~~nt~a~~~S~~~~~~-~~~~~~~~~~~ 256 (339)
.-|.++|.+|..+-+.++.. ...|+.||+..
T Consensus 38 ~eY~vsNiisv~Sgll~I~~GI~AIvlSrnl~ 69 (188)
T PF12304_consen 38 LEYAVSNIISVTSGLLSIICGIVAIVLSRNLR 69 (188)
T ss_pred ehhhHHHHHHHHHHHHHHHHhHHHHhhhccCC
Confidence 45778999999988888764 45666677643
No 134
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=34.26 E-value=77 Score=28.40 Aligned_cols=83 Identities=8% Similarity=0.017 Sum_probs=57.2
Q ss_pred CCcHHHHHHHCCcHHHHHHHHHH----CCCCcccccCCCchHhhHHHH--cCChHHHHHHHcccCcccccccc---ccCC
Q 047454 42 LKKAFFKAATLGISKFVQEIIAA----YKGSVYWEDENKHTIFHVAVL--HRRAEVFNLIYSSTFKSNWLGSN---DNIR 112 (339)
Q Consensus 42 g~tpLh~Aa~~G~~~iv~~Ll~~----~p~~~~~~d~~G~t~LH~A~~--~~~~~iv~~Ll~~~~~~~~~~~~---D~~G 112 (339)
-.+++-+|..++..+++-+|++. ..+.+.... +---+-++-. .....++++.+++|- ..++.+ -+.|
T Consensus 179 A~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~--~~ydieY~LS~h~a~~kvL~~Fi~~Gl--v~vN~~F~~~NSG 254 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEK--ELYDIEYLLSEHSASYKVLEYFINRGL--VDVNKKFQKVNSG 254 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhhcceecchhhhcCc--chhhHHHHHhhcCCcHHHHHHHHhccc--cccchhhhccCCc
Confidence 35888999999999999999975 233333222 2223444433 346789999999883 345544 7899
Q ss_pred CchHHHhhhcCCCCCc
Q 047454 113 NNILHFGGKLVPSSEV 128 (339)
Q Consensus 113 nTpLHlA~~~~~~~~v 128 (339)
.|-|.-|.+.++.+.+
T Consensus 255 dtMLDNA~Ky~~~emi 270 (284)
T PF06128_consen 255 DTMLDNAMKYKNSEMI 270 (284)
T ss_pred chHHHhHHhcCcHHHH
Confidence 9999999999986443
No 135
>PF10966 DUF2768: Protein of unknown function (DUF2768); InterPro: IPR020076 This entry contains proteins with no known function.
Probab=33.23 E-value=58 Score=22.41 Aligned_cols=21 Identities=14% Similarity=0.273 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHhHHhhcC
Q 047454 275 FFSIASMMVSFGATIYLVLFS 295 (339)
Q Consensus 275 ~~s~~~m~~af~~~~~~vl~~ 295 (339)
|+|+.+|..=|.+.....+++
T Consensus 3 WiS~~~iglMfisv~~i~~sR 23 (58)
T PF10966_consen 3 WISFGAIGLMFISVILIYFSR 23 (58)
T ss_pred chHHHHHHHHHHHHHHHHHHH
Confidence 455555555555555544443
No 136
>PRK09546 zntB zinc transporter; Reviewed
Probab=32.56 E-value=70 Score=29.97 Aligned_cols=20 Identities=5% Similarity=0.159 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHhHH
Q 047454 272 ITMFFSIASMMVSFGATIYL 291 (339)
Q Consensus 272 ~~~~~s~~~m~~af~~~~~~ 291 (339)
.+..++..+|..+|.||+|-
T Consensus 266 ~Ltilt~IflPlT~IaGiyG 285 (324)
T PRK09546 266 TMSLMAMVFLPTTFLTGLFG 285 (324)
T ss_pred HHHHHHHHHHHHHHHHhhhc
Confidence 45567888999999999995
No 137
>PF07954 DUF1689: Protein of unknown function (DUF1689) ; InterPro: IPR012470 Family of fungal proteins with unknown function. A member of this family has been found to localise in the mitochondria [].
Probab=32.08 E-value=97 Score=25.83 Aligned_cols=61 Identities=18% Similarity=0.189 Sum_probs=42.2
Q ss_pred hHHHHHHHHhhHHHHHhhhhhhHHHHHHHHHHHHHHhhcCCCCCCC------CCcccccCcchhhhHH
Q 047454 168 TEEHKELVKEGEKWMKETATACSVVAAFIITVMFAAAFTVPGGNDS------RGIPNFLHESSFIIFA 229 (339)
Q Consensus 168 ~~~~~~l~~~~~~~~~~~~~s~~vvA~LIATvtfaa~ft~Pgg~~~------~G~~~l~~~~~f~~F~ 229 (339)
.|..++|..+.+.++.+.-++...-..+....+|.++|-.|--|.- .|.|+-..+ .|..|+
T Consensus 8 YEaD~~L~~~DR~eL~~~~q~i~~~~~~~g~~~~~~gF~~Pt~y~~yk~~~~~gv~~~~~~-pflSf~ 74 (152)
T PF07954_consen 8 YEADQKLDHEDRLELAKDLQSIARKSNLGGYGGFMAGFFAPTAYYRYKTGAIKGVPVPRQK-PFLSFL 74 (152)
T ss_pred HHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcccccCCcCCccC-cchhHH
Confidence 3444555555666777888888888888899999999999987732 566655533 344443
No 138
>PF07856 Orai-1: Mediator of CRAC channel activity; InterPro: IPR012446 This entry includes Drosophila Orai and human Orai1, Orai2 and Orai3. ORAI-1 GFP reporters are co-expressed with STIM-1 (ER CA(2+) sensors) in the gonad and intestine. The protein has four predicted transmembrane domains with a highly conserved region between TM2 ad TM3. This conserved domain is thought to function in channel regulation. ORAI1-related proteins are required for the production of the calcium channel, CRAC, along with STIM1-related proteins [].
Probab=31.93 E-value=3.2e+02 Score=23.28 Aligned_cols=52 Identities=17% Similarity=0.214 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCCCCCcccccCcchhhhHHHHHHHHHHHHHHHHHH
Q 047454 189 CSVVAAFIITVMFAAAFTVPGGNDSRGIPNFLHESSFIIFAVSDALSLFSSIISVLM 245 (339)
Q Consensus 189 ~~vvA~LIATvtfaa~ft~Pgg~~~~G~~~l~~~~~f~~F~~~nt~a~~~S~~~~~~ 245 (339)
.+-.++|++.-+..|-..+ ++++ +... .+....+|-++-++-+..-+.++++
T Consensus 23 ~S~~saLlaGFamvamvE~--q~~~-~~~~--~~~LL~~f~~~TallV~v~l~almi 74 (175)
T PF07856_consen 23 SSNLSALLAGFAMVAMVEF--QFPE-DTTY--PPPLLIAFAVVTALLVAVHLFALMI 74 (175)
T ss_pred HHHHHHHHHhhheeeEEEE--ecCC-CCCC--chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345666665555555433 2221 1100 3455677777777766655555543
No 139
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=30.21 E-value=1.2e+02 Score=23.89 Aligned_cols=36 Identities=17% Similarity=0.414 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCcceeehhhHHHHHH
Q 047454 268 IIDLITMFFSIASMMVSFGATIYLVLFSTWKWVFIPITLVGCV 310 (339)
Q Consensus 268 ~~~~~~~~~s~~~m~~af~~~~~~vl~~~~~~~~~~~~~~~~~ 310 (339)
.|++.++++++.-|.+. ++ . +.+.|+.....+++.+
T Consensus 13 ~~al~lif~g~~vmy~g----i~--f-~~~~~im~ifmllG~L 48 (114)
T PF11023_consen 13 TFALSLIFIGMIVMYIG----IF--F-KASPIIMVIFMLLGLL 48 (114)
T ss_pred HHHHHHHHHHHHHHhhh----hh--h-cccHHHHHHHHHHHHH
Confidence 47888888887777654 22 2 2355554444444433
No 140
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=29.48 E-value=3.5e+02 Score=22.81 Aligned_cols=77 Identities=21% Similarity=0.279 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCcccccCcchhhhHHHHHHHHHHHHHHHHHHH---HHHhcccccchhhhhhhHHH
Q 047454 190 SVVAAFIITVMFAAAFTVPGGNDSRGIPNFLHESSFIIFAVSDALSLFSSIISVLMF---LGILTSRYSEEDFLLSLPRK 266 (339)
Q Consensus 190 ~vvA~LIATvtfaa~ft~Pgg~~~~G~~~l~~~~~f~~F~~~nt~a~~~S~~~~~~~---~~~~~~~~~~~~~~~~l~~~ 266 (339)
...+++...++|..+..+|= + .| |+.....++..|+..+++. ++...++.....+
T Consensus 88 p~~aAl~sgls~~~g~liPl---------l----p~--~~~~~~~a~~~s~~~~~~~L~ilG~~~a~~s~~~~------- 145 (169)
T TIGR00267 88 VYMSGFIDGFSTFMGSFVPV---------L----PF--LVFDRMTATIVTVLLTLIALLVLGVYLGRISRENI------- 145 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHH---------H----HH--HHcchhHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-------
Confidence 44556666666666655542 1 11 1122234555555555432 3333333333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 047454 267 LIIDLITMFFSIASMMVSFGAT 288 (339)
Q Consensus 267 l~~~~~~~~~s~~~m~~af~~~ 288 (339)
+..++..+.++..+|.++|..|
T Consensus 146 ~~s~lr~~~~G~~aa~it~~iG 167 (169)
T TIGR00267 146 LISSLKMVVIGLLVAVVSLLIE 167 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 2345666777888888888654
No 141
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=27.84 E-value=92 Score=28.90 Aligned_cols=21 Identities=29% Similarity=0.263 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHh
Q 047454 272 ITMFFSIASMMVSFGATIYLV 292 (339)
Q Consensus 272 ~~~~~s~~~m~~af~~~~~~v 292 (339)
.+..+|++.+..+|.+|+|-+
T Consensus 260 ~LTvvt~IflP~t~IaGiyGM 280 (318)
T TIGR00383 260 ILTVVSTIFIPLTFIAGIYGM 280 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 456688889999999999963
No 142
>PF11137 DUF2909: Protein of unknown function (DUF2909); InterPro: IPR021313 This is a family of proteins conserved in Proteobacteria of unknown function.
Probab=27.17 E-value=2.2e+02 Score=19.90 Aligned_cols=58 Identities=19% Similarity=0.305 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 047454 226 IIFAVSDALSLFSSIISVLMFLGILTSRYSEEDFLLSLPRKLIIDLITMFFSIASMMVSFGATI 289 (339)
Q Consensus 226 ~~F~~~nt~a~~~S~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~m~~af~~~~ 289 (339)
++.++.=-++.+.|+.+.+.++ .-.+-+.+...+++.++...+. .-+..+++|+.+|.
T Consensus 2 Ki~iv~lll~ii~sL~saL~~l--~kd~~~~~rm~~~L~~RV~lS~----~l~~lil~~~~~G~ 59 (63)
T PF11137_consen 2 KILIVLLLLAIIASLFSALFFL--VKDKGSSKRMVKALGRRVGLSA----LLFLLILIALYTGW 59 (63)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH--hhCCCCCchHHHHHHHHHHHHH----HHHHHHHHHHHhCC
Confidence 4455555667777777766554 2222233344444444433322 22334566666664
No 143
>COG4325 Predicted membrane protein [Function unknown]
Probab=26.94 E-value=6e+02 Score=24.76 Aligned_cols=30 Identities=17% Similarity=0.137 Sum_probs=17.9
Q ss_pred HhhhhhhHHHHHHHHHHHHHHhhcCCCCCC
Q 047454 183 KETATACSVVAAFIITVMFAAAFTVPGGND 212 (339)
Q Consensus 183 ~~~~~s~~vvA~LIATvtfaa~ft~Pgg~~ 212 (339)
+...+..-+.++--+-++-.-+|++|-+-.
T Consensus 32 d~l~~~~WvipA~~vv~al~fgf~L~~~~R 61 (464)
T COG4325 32 DYLQGAVWVIPAFGVVIALGFGFVLSMIPR 61 (464)
T ss_pred HhhccceeeehHHHHHHHHHHHHhhccccc
Confidence 444455545555555566667788877664
No 144
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=25.84 E-value=2.3e+02 Score=26.52 Aligned_cols=21 Identities=14% Similarity=0.070 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHh
Q 047454 272 ITMFFSIASMMVSFGATIYLV 292 (339)
Q Consensus 272 ~~~~~s~~~m~~af~~~~~~v 292 (339)
.+..+|++.+..+|.+|+|-+
T Consensus 264 ~LTi~s~iflPpTlIagiyGM 284 (322)
T COG0598 264 ILTIVSTIFLPPTLITGFYGM 284 (322)
T ss_pred HHHHHHHHHHhhHHHHccccc
Confidence 345688889999999999844
No 145
>PTZ00370 STEVOR; Provisional
Probab=24.40 E-value=73 Score=29.39 Aligned_cols=38 Identities=13% Similarity=0.276 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhHHhhcCCcceeehhhHHHHHHHHHHHHHhhh
Q 047454 279 ASMMVSFGATIYLVLFSTWKWVFIPITLVGCVPVTLFALLQF 320 (339)
Q Consensus 279 ~~m~~af~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (339)
...++++++|.+ .| ....|+++.+++.+.+++|+|+.-
T Consensus 243 agtAAtaAsaaF---~P-ygiaalvllil~vvliilYiwlyr 280 (296)
T PTZ00370 243 AGTAASAASSAF---YP-YGIAALVLLILAVVLIILYIWLYR 280 (296)
T ss_pred cchHHHHHHHhh---cc-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555554 33 444555555666666666777653
No 146
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=23.94 E-value=2.6e+02 Score=24.46 Aligned_cols=78 Identities=15% Similarity=0.206 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCCCCCCcccccCcchhhhHHHHH--HHHHHHHHHHHHHH---HHHhcccccchhhhhhh
Q 047454 189 CSVVAAFIITVMFAAAFTVPGGNDSRGIPNFLHESSFIIFAVSD--ALSLFSSIISVLMF---LGILTSRYSEEDFLLSL 263 (339)
Q Consensus 189 ~~vvA~LIATvtfaa~ft~Pgg~~~~G~~~l~~~~~f~~F~~~n--t~a~~~S~~~~~~~---~~~~~~~~~~~~~~~~l 263 (339)
....+++...+.|..+--+|- ..|+.+. ..++..|+..+++. ++..-++.....+
T Consensus 130 ~p~~~al~~~~sf~lg~liPl----------------lp~~~~~~~~~a~~~s~~~~~~~L~~~G~~~a~~~~~~~---- 189 (213)
T PF01988_consen 130 SPWKAALATFLSFILGGLIPL----------------LPYFFLPSVSEAFIASIAVTILALFILGYFKARISGQSW---- 189 (213)
T ss_pred hHHHHHHHHHHHHHHHHHHHH----------------HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH----
Confidence 355666666666665544432 1122221 36666666655432 2333333333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 047454 264 PRKLIIDLITMFFSIASMMVSFGATI 289 (339)
Q Consensus 264 ~~~l~~~~~~~~~s~~~m~~af~~~~ 289 (339)
...++..+.+++.++.++|..|.
T Consensus 190 ---~~~~l~~~~~G~~aa~~~~~iG~ 212 (213)
T PF01988_consen 190 ---WRSGLEMLLIGLIAAAVTYLIGY 212 (213)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhh
Confidence 23456677788888888887763
No 147
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=23.86 E-value=6.1e+02 Score=24.22 Aligned_cols=43 Identities=12% Similarity=0.212 Sum_probs=22.7
Q ss_pred ccccchhhhhhhHHHH-------HHHHHHHHHHHHHHHHHHHHHhHHhhc
Q 047454 252 SRYSEEDFLLSLPRKL-------IIDLITMFFSIASMMVSFGATIYLVLF 294 (339)
Q Consensus 252 ~~~~~~~~~~~l~~~l-------~~~~~~~~~s~~~m~~af~~~~~~vl~ 294 (339)
..+...++....+++. ...+..-.+|+..++++...|...+..
T Consensus 200 kGfgld~~~~~~~~~~~~~l~~g~it~ityvva~~l~iig~i~g~~~~~~ 249 (344)
T PF04123_consen 200 KGFGLDDYLREWLERFRESLYEGRITFITYVVALLLIIIGIIYGYLTLWS 249 (344)
T ss_pred HhcCcHHHHHHHHHHhccccccceeehHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455555555555554 334444455555555655555554443
No 148
>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ]. CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. Transporter ZntB mediates efflux of zinc ions [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 2HN1_A 3NWI_D 3NVO_B 3CK6_A 2IUB_E 2BBJ_E 2HN2_A 2BBH_A.
Probab=22.58 E-value=1.2e+02 Score=27.43 Aligned_cols=21 Identities=10% Similarity=0.183 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHh
Q 047454 272 ITMFFSIASMMVSFGATIYLV 292 (339)
Q Consensus 272 ~~~~~s~~~m~~af~~~~~~v 292 (339)
.++.++++.|.++|++|+|-+
T Consensus 236 ~LT~~t~iflPlt~i~g~fGM 256 (292)
T PF01544_consen 236 VLTIVTAIFLPLTFITGIFGM 256 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSTTS
T ss_pred HHHHHHHHHHHHHHHHHHhhC
Confidence 346678888999999999966
No 149
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=22.47 E-value=2.5e+02 Score=27.73 Aligned_cols=48 Identities=17% Similarity=0.303 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCcceeehhhHHHHHHHHHHHHHhh
Q 047454 268 IIDLITMFFSIASMMVSFGATIYLVLFSTWKWVFIPITLVGCVPVTLFALLQ 319 (339)
Q Consensus 268 ~~~~~~~~~s~~~m~~af~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (339)
.+++..--.+.+.|+..|+.++. .+.++..+...+++++-.++|+++|
T Consensus 352 ~~AYliAa~a~i~Li~~Y~~~vl----~~~k~~~~~~~~L~~LY~~Ly~lLq 399 (430)
T PF06123_consen 352 NLAYLIAALACIGLISLYLSSVL----KSWKRGLIFAGLLAALYGFLYVLLQ 399 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHHHH
Confidence 35555555666666666776655 3334333333444555555555544
No 150
>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569. This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.
Probab=22.47 E-value=4.5e+02 Score=21.76 Aligned_cols=29 Identities=24% Similarity=0.474 Sum_probs=24.3
Q ss_pred ccccCcchhhhHHHHHHHHHHHHHHHHHH
Q 047454 217 PNFLHESSFIIFAVSDALSLFSSIISVLM 245 (339)
Q Consensus 217 ~~l~~~~~f~~F~~~nt~a~~~S~~~~~~ 245 (339)
+...+-++|+.|+..|.++...|+..+..
T Consensus 36 a~f~d~~af~y~v~anai~~~Ysll~l~~ 64 (154)
T TIGR01569 36 AKFSDLPAFVYFVVANAIACGYSLLSLVV 64 (154)
T ss_pred eeeeccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556789999999999999999987754
No 151
>PF07344 Amastin: Amastin surface glycoprotein; InterPro: IPR009944 This family contains the eukaryotic surface glycoprotein amastin (approximately 180 residues long).In Trypanosoma cruzi, amastin is particularly abundant during the amastigote stage.
Probab=22.03 E-value=2.1e+02 Score=23.68 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCccee
Q 047454 267 LIIDLITMFFSIASMMVSFGATIYLVLF-STWKWV 300 (339)
Q Consensus 267 l~~~~~~~~~s~~~m~~af~~~~~~vl~-~~~~~~ 300 (339)
+..+-.+..+|+....+||..|+..... +..+|.
T Consensus 62 f~aa~afaIisi~~~~~a~v~g~~~l~~~~~~r~v 96 (155)
T PF07344_consen 62 FRAAQAFAIISIFVYGAAFVLGVLLLCCCSCLRWV 96 (155)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 3344455555555556666666555554 334553
No 152
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=21.51 E-value=89 Score=28.79 Aligned_cols=37 Identities=14% Similarity=0.262 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhHHhhcCCcceeehhhHHHHHHHHHHHHHhh
Q 047454 279 ASMMVSFGATIYLVLFSTWKWVFIPITLVGCVPVTLFALLQ 319 (339)
Q Consensus 279 ~~m~~af~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (339)
...++++++|.+ .| ....|+++.+++.+.+++|+|+.
T Consensus 247 agtAAtaA~aaF---~P-cgiaalvllil~vvliiLYiWly 283 (295)
T TIGR01478 247 AERAASAATSTF---LP-YGIAALVLIILTVVLIILYIWLY 283 (295)
T ss_pred cchHHHHHHHhh---cc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555544 23 33445555555665666666654
No 153
>PF11286 DUF3087: Protein of unknown function (DUF3087); InterPro: IPR021438 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=21.22 E-value=5.1e+02 Score=21.92 Aligned_cols=25 Identities=12% Similarity=0.256 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhcC
Q 047454 271 LITMFFSIASMMVSFGATIYLVLFS 295 (339)
Q Consensus 271 ~~~~~~s~~~m~~af~~~~~~vl~~ 295 (339)
...+..++.....+|.+++....+.
T Consensus 19 ~~~~v~~lai~sl~~s~llI~lFg~ 43 (165)
T PF11286_consen 19 IVACVASLAILSLAFSQLLIALFGG 43 (165)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3334455666677888888888875
No 154
>PLN02922 prenyltransferase
Probab=20.84 E-value=4.6e+02 Score=24.54 Aligned_cols=27 Identities=30% Similarity=0.313 Sum_probs=12.8
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHhh
Q 047454 179 EKWMKETATACSVVAAFIITVMFAAAF 205 (339)
Q Consensus 179 ~~~~~~~~~s~~vvA~LIATvtfaa~f 205 (339)
++|..-.+-..+.++..-..+.-+.++
T Consensus 16 ~~w~~a~Rp~tl~~s~~pv~lG~a~A~ 42 (315)
T PLN02922 16 TLWWRAIKLPMYSVALVPLTVGAAAAY 42 (315)
T ss_pred HHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 346666665444444443333333343
No 155
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=20.51 E-value=6e+02 Score=22.42 Aligned_cols=21 Identities=10% Similarity=0.105 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 047454 269 IDLITMFFSIASMMVSFGATI 289 (339)
Q Consensus 269 ~~~~~~~~s~~~m~~af~~~~ 289 (339)
.++-.+.++..++.++|..|.
T Consensus 196 ~~l~~~~iG~~aa~vty~iG~ 216 (218)
T cd02432 196 AILRNVIWGALAMALTYLIGR 216 (218)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 456677788888999988773
No 156
>COG1814 Uncharacterized membrane protein [Function unknown]
Probab=20.10 E-value=3.5e+02 Score=23.99 Aligned_cols=56 Identities=23% Similarity=0.345 Sum_probs=26.3
Q ss_pred hHHHHHHH-HHHHHHHHHHHHHHH---hcccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 047454 227 IFAVSDAL-SLFSSIISVLMFLGI---LTSRYSEEDFLLSLPRKLIIDLITMFFSIASMMVSFGATI 289 (339)
Q Consensus 227 ~F~~~nt~-a~~~S~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~m~~af~~~~ 289 (339)
.|++.+.. |+..|++.+++.+++ ..++....++.+ +.+..+..++.+|.+.|..|.
T Consensus 164 ~~~~~~~~~al~~si~~~~l~L~ilG~~~a~~s~~~~~~-------~~lr~v~~gl~aa~lt~~vg~ 223 (229)
T COG1814 164 FFFLPDVLSALIASIILALLALAILGAVLARLSGASIAK-------SILRMVLLGLLAALLTYLVGR 223 (229)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 44555555 667777666554333 223333333322 233334445555555555443
Done!