Query 047454
Match_columns 339
No_of_seqs 280 out of 2381
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 19:46:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047454.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047454hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.8 1.1E-18 3.7E-23 148.0 11.5 128 21-170 17-146 (169)
2 3twr_A Tankyrase-2; ankyrin re 99.7 8.7E-18 3E-22 140.4 11.7 133 21-174 21-155 (165)
3 3f6q_A Integrin-linked protein 99.7 3.3E-17 1.1E-21 139.0 13.1 130 21-171 18-149 (179)
4 4gpm_A Engineered protein OR26 99.7 2.1E-17 7.3E-22 140.0 11.4 99 22-125 51-149 (169)
5 3c5r_A BARD-1, BRCA1-associate 99.7 2.5E-17 8.5E-22 133.5 9.2 114 37-171 5-120 (137)
6 1bd8_A P19INK4D CDK4/6 inhibit 99.7 4.9E-17 1.7E-21 134.4 10.4 128 21-170 15-143 (156)
7 3v30_A DNA-binding protein rfx 99.7 1.1E-16 3.8E-21 134.5 11.4 129 21-170 15-145 (172)
8 3v31_A Ankyrin repeat family A 99.7 1.7E-16 5.7E-21 132.8 12.4 128 21-170 16-145 (167)
9 2y1l_E Darpin-8.4; hydrolase-i 99.7 1.2E-16 4.2E-21 134.2 11.5 128 21-170 27-156 (169)
10 1n0q_A 3ANK, 3 ankyrin repeats 99.7 6.5E-17 2.2E-21 122.4 8.5 81 41-125 1-81 (93)
11 1awc_B Protein (GA binding pro 99.7 1E-16 3.5E-21 132.4 10.2 126 21-170 15-143 (153)
12 2dzn_A Probable 26S proteasome 99.7 1.4E-16 4.9E-21 139.4 11.2 102 21-125 49-153 (228)
13 1ihb_A P18-INK4C(INK6), cyclin 99.7 9E-17 3.1E-21 133.5 8.6 127 21-170 18-147 (162)
14 3aaa_C Myotrophin, protein V-1 99.7 1.3E-16 4.6E-21 126.9 8.6 82 39-124 4-85 (123)
15 2jab_A H10-2-G3; HER2, darpin, 99.7 3E-16 1E-20 127.2 10.7 100 21-125 27-126 (136)
16 2rfm_A Putative ankyrin repeat 99.7 1.6E-16 5.6E-21 136.0 9.7 127 22-170 49-177 (192)
17 3aaa_C Myotrophin, protein V-1 99.7 2.5E-16 8.5E-21 125.3 9.6 97 21-122 20-116 (123)
18 1oy3_D Transcription factor in 99.7 3.1E-16 1.1E-20 141.4 10.1 118 35-172 151-270 (282)
19 4b93_B Ankyrin repeat domain-c 99.6 3.1E-16 1.1E-20 142.5 10.0 99 22-125 67-165 (269)
20 1d9s_A Cyclin-dependent kinase 99.6 1.3E-16 4.6E-21 129.2 6.5 115 34-170 4-121 (136)
21 2rfa_A Transient receptor pote 99.6 5.3E-16 1.8E-20 136.4 10.7 133 21-170 16-164 (232)
22 3hra_A Ankyrin repeat family p 99.6 7.7E-16 2.6E-20 132.2 11.2 101 22-125 19-119 (201)
23 1s70_B 130 kDa myosin-binding 99.6 8.7E-16 3E-20 140.1 12.0 78 21-100 53-130 (299)
24 1d9s_A Cyclin-dependent kinase 99.6 3.7E-16 1.2E-20 126.6 8.1 99 21-125 25-124 (136)
25 3aji_A 26S proteasome non-ATPa 99.6 1.2E-15 4.1E-20 133.9 12.0 100 21-125 53-152 (231)
26 1bd8_A P19INK4D CDK4/6 inhibit 99.6 1.2E-15 4E-20 126.0 11.3 100 20-125 47-146 (156)
27 3b7b_A Euchromatic histone-lys 99.6 1.6E-15 5.4E-20 133.7 12.7 100 21-125 57-157 (237)
28 1awc_B Protein (GA binding pro 99.6 9.5E-16 3.3E-20 126.5 10.6 100 21-125 47-146 (153)
29 3v30_A DNA-binding protein rfx 99.6 1.4E-15 4.8E-20 127.7 11.6 100 21-125 49-148 (172)
30 3deo_A Signal recognition part 99.6 1.2E-15 4E-20 130.0 11.1 99 21-125 57-156 (183)
31 2rfa_A Transient receptor pote 99.6 9.9E-16 3.4E-20 134.7 10.9 101 21-125 50-167 (232)
32 3jxi_A Vanilloid receptor-rela 99.6 1E-15 3.4E-20 137.1 11.1 101 21-125 62-189 (260)
33 1k1a_A B-cell lymphoma 3-encod 99.6 1.3E-15 4.4E-20 134.3 11.6 101 21-125 59-163 (241)
34 1ihb_A P18-INK4C(INK6), cyclin 99.6 1.2E-15 4.1E-20 126.6 10.7 102 20-125 49-150 (162)
35 1yyh_A HN1;, notch 1, ankyrin 99.6 6.1E-16 2.1E-20 138.5 9.5 101 21-125 70-170 (253)
36 2f8y_A Notch homolog 1, transl 99.6 1.4E-15 4.7E-20 132.8 11.4 101 21-125 38-138 (223)
37 3c5r_A BARD-1, BRCA1-associate 99.6 9.3E-16 3.2E-20 124.2 9.3 99 21-124 23-121 (137)
38 1bi7_B P16INK4A, MTS1, multipl 99.6 5.3E-16 1.8E-20 128.7 8.0 99 21-125 25-124 (156)
39 4b93_B Ankyrin repeat domain-c 99.6 6.8E-16 2.3E-20 140.2 9.1 98 22-124 133-230 (269)
40 2pnn_A Transient receptor pote 99.6 2.5E-15 8.7E-20 135.7 12.8 101 21-125 70-197 (273)
41 1yyh_A HN1;, notch 1, ankyrin 99.6 1E-15 3.4E-20 137.0 10.0 104 19-126 34-138 (253)
42 3t8k_A Uncharacterized protein 99.6 5.4E-16 1.8E-20 133.3 7.9 116 39-170 35-164 (186)
43 2f8y_A Notch homolog 1, transl 99.6 2.2E-15 7.6E-20 131.5 11.2 129 21-170 71-201 (223)
44 2etb_A Transient receptor pote 99.6 1.5E-15 5.1E-20 135.8 10.3 99 22-124 60-184 (256)
45 2jab_A H10-2-G3; HER2, darpin, 99.6 5.6E-16 1.9E-20 125.5 6.9 111 39-170 11-123 (136)
46 1ikn_D Protein (I-kappa-B-alph 99.6 1E-15 3.6E-20 135.1 9.0 128 22-170 59-194 (236)
47 3deo_A Signal recognition part 99.6 7.1E-16 2.4E-20 131.4 6.8 110 39-170 41-153 (183)
48 2dzn_A Probable 26S proteasome 99.6 2.4E-15 8.1E-20 131.6 10.2 104 21-125 15-120 (228)
49 1n0r_A 4ANK, 4 ankyrin repeats 99.6 4.3E-15 1.5E-19 117.4 10.8 100 21-125 15-114 (126)
50 2etb_A Transient receptor pote 99.6 7.8E-16 2.7E-20 137.6 7.1 138 12-169 9-181 (256)
51 2l6b_A NR1C; ankyrin, consensu 99.6 2E-15 6.7E-20 118.5 8.2 83 39-125 6-88 (115)
52 4hbd_A KN motif and ankyrin re 99.6 1.9E-15 6.4E-20 137.6 9.3 129 22-170 90-260 (276)
53 3twr_A Tankyrase-2; ankyrin re 99.6 4.2E-15 1.4E-19 123.9 10.5 98 21-124 55-152 (165)
54 1sw6_A Regulatory protein SWI6 99.6 2.2E-15 7.5E-20 140.4 9.5 102 17-121 102-210 (327)
55 2y1l_E Darpin-8.4; hydrolase-i 99.6 6.4E-15 2.2E-19 123.6 11.4 100 21-125 60-159 (169)
56 2vge_A RELA-associated inhibit 99.6 3.1E-15 1.1E-19 132.5 10.0 97 25-125 2-100 (229)
57 1n0r_A 4ANK, 4 ankyrin repeats 99.6 3.1E-15 1E-19 118.3 8.9 109 41-170 1-111 (126)
58 3b7b_A Euchromatic histone-lys 99.6 5.7E-15 1.9E-19 130.1 11.4 101 21-125 24-124 (237)
59 2xai_A ASB-9, ankyrin repeat a 99.6 7.7E-15 2.6E-19 132.0 12.2 96 22-125 83-179 (261)
60 3ehr_A Osteoclast-stimulating 99.6 1.8E-15 6E-20 132.7 7.8 111 39-170 70-183 (222)
61 1oy3_D Transcription factor in 99.6 2.5E-15 8.5E-20 135.4 9.0 104 21-125 22-171 (282)
62 3utm_A Tankyrase-1; tankyrase, 99.6 7.2E-15 2.5E-19 136.3 12.3 78 21-100 71-148 (351)
63 3v31_A Ankyrin repeat family A 99.6 7.5E-15 2.6E-19 122.6 11.1 100 21-125 49-148 (167)
64 2xai_A ASB-9, ankyrin repeat a 99.6 6.6E-15 2.2E-19 132.4 11.5 99 21-125 49-147 (261)
65 3hra_A Ankyrin repeat family p 99.6 6.6E-15 2.3E-19 126.3 11.0 101 21-124 52-152 (201)
66 3jxi_A Vanilloid receptor-rela 99.6 2.9E-15 1E-19 134.1 9.1 111 12-125 12-153 (260)
67 2zgd_A 3 repeat synthetic anky 99.6 2.4E-15 8.2E-20 117.6 7.3 83 39-125 21-103 (110)
68 2rfm_A Putative ankyrin repeat 99.6 6.3E-15 2.2E-19 126.1 10.6 100 21-125 81-180 (192)
69 3ui2_A Signal recognition part 99.6 4.1E-15 1.4E-19 132.9 9.7 98 22-125 59-157 (244)
70 1sw6_A Regulatory protein SWI6 99.6 1.8E-15 6.3E-20 141.0 7.7 131 21-169 144-325 (327)
71 3aji_A 26S proteasome non-ATPa 99.6 6.1E-15 2.1E-19 129.4 10.7 100 22-125 20-119 (231)
72 1ikn_D Protein (I-kappa-B-alph 99.6 1.6E-14 5.3E-19 127.6 13.0 101 21-125 91-197 (236)
73 3ehr_A Osteoclast-stimulating 99.6 3.6E-15 1.2E-19 130.6 8.7 100 21-124 86-185 (222)
74 3f6q_A Integrin-linked protein 99.6 6.8E-15 2.3E-19 124.5 9.4 99 21-124 52-150 (179)
75 1dcq_A PYK2-associated protein 99.6 1.1E-14 3.9E-19 132.8 11.2 100 22-125 144-251 (278)
76 1n11_A Ankyrin; clathrin, BAND 99.6 8.2E-15 2.8E-19 141.1 10.7 98 22-125 226-324 (437)
77 4hbd_A KN motif and ankyrin re 99.6 1.3E-14 4.6E-19 131.9 11.3 102 19-125 161-263 (276)
78 2vge_A RELA-associated inhibit 99.6 1E-14 3.4E-19 129.3 9.8 100 21-125 34-136 (229)
79 3ljn_A Hypothetical protein; a 99.6 8.7E-15 3E-19 137.7 9.8 115 38-170 134-254 (364)
80 2b0o_E UPLC1; arfgap, structur 99.6 1.8E-14 6.1E-19 133.1 11.6 100 22-125 165-272 (301)
81 3utm_A Tankyrase-1; tankyrase, 99.6 1.3E-14 4.6E-19 134.4 10.8 100 22-125 38-137 (351)
82 1ycs_B 53BP2, P53BP2; ankyrin 99.5 1.3E-14 4.3E-19 129.0 10.0 100 21-125 50-152 (239)
83 3ui2_A Signal recognition part 99.5 3.1E-15 1.1E-19 133.7 5.8 109 39-169 42-153 (244)
84 1k1a_A B-cell lymphoma 3-encod 99.5 2.5E-14 8.6E-19 125.9 11.5 110 12-125 16-129 (241)
85 3ljn_A Hypothetical protein; a 99.5 1.6E-14 5.3E-19 135.9 10.7 102 20-125 152-257 (364)
86 3d9h_A CDNA FLJ77766, highly s 99.5 2.3E-14 7.8E-19 130.8 11.4 99 21-125 105-203 (285)
87 1ycs_B 53BP2, P53BP2; ankyrin 99.5 4.4E-15 1.5E-19 132.0 6.2 98 21-125 18-116 (239)
88 3jue_A Arfgap with coiled-coil 99.5 2.9E-14 9.9E-19 135.4 11.6 101 21-125 213-314 (368)
89 1bi7_B P16INK4A, MTS1, multipl 99.5 5.2E-15 1.8E-19 122.6 5.7 110 39-170 9-121 (156)
90 3d9h_A CDNA FLJ77766, highly s 99.5 2.7E-14 9.2E-19 130.3 10.5 97 22-124 73-169 (285)
91 3eu9_A Huntingtin-interacting 99.5 4.9E-14 1.7E-18 123.5 11.6 101 21-125 22-122 (240)
92 1wdy_A 2-5A-dependent ribonucl 99.5 3.8E-14 1.3E-18 127.3 10.8 130 21-170 118-263 (285)
93 3t8k_A Uncharacterized protein 99.5 1.1E-14 3.7E-19 125.1 6.7 100 21-125 55-167 (186)
94 3kea_A K1L; tropism, ANK repea 99.5 3.9E-14 1.3E-18 129.4 10.2 97 21-125 44-142 (285)
95 2fo1_E LIN-12 protein; beta-ba 99.5 4.9E-14 1.7E-18 133.6 10.7 103 20-125 250-359 (373)
96 2pnn_A Transient receptor pote 99.5 3.9E-14 1.3E-18 127.9 9.4 102 21-125 114-246 (273)
97 2fo1_E LIN-12 protein; beta-ba 99.5 2.6E-14 9E-19 135.4 8.5 103 22-125 180-292 (373)
98 3kea_A K1L; tropism, ANK repea 99.5 1.8E-14 6E-19 131.6 7.0 97 20-125 12-108 (285)
99 1s70_B 130 kDa myosin-binding 99.5 5.2E-14 1.8E-18 128.2 9.3 84 39-126 37-120 (299)
100 1n11_A Ankyrin; clathrin, BAND 99.5 7.2E-14 2.5E-18 134.5 10.5 100 21-125 27-126 (437)
101 3lvq_E ARF-GAP with SH3 domain 99.5 8E-14 2.7E-18 137.3 10.7 100 22-125 146-253 (497)
102 4g8k_A 2-5A-dependent ribonucl 99.5 1.2E-13 4E-18 128.6 11.1 104 21-125 38-181 (337)
103 1wdy_A 2-5A-dependent ribonucl 99.5 1.5E-13 5E-18 123.5 10.9 100 21-125 18-118 (285)
104 3eu9_A Huntingtin-interacting 99.5 2.2E-13 7.5E-18 119.3 10.0 100 21-125 55-155 (240)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.4 4.5E-13 1.5E-17 101.0 9.6 78 21-100 15-92 (93)
106 4g8k_A 2-5A-dependent ribonucl 99.4 3.6E-13 1.2E-17 125.2 10.7 101 22-125 182-286 (337)
107 2b0o_E UPLC1; arfgap, structur 99.4 1.2E-13 4E-18 127.6 7.2 95 20-125 205-299 (301)
108 2l6b_A NR1C; ankyrin, consensu 99.4 5.7E-13 1.9E-17 104.2 6.9 90 21-115 22-111 (115)
109 1dcq_A PYK2-associated protein 99.3 2.4E-12 8.2E-17 117.3 8.3 110 41-170 129-248 (278)
110 2aja_A Ankyrin repeat family p 99.3 5.5E-13 1.9E-17 126.9 3.5 100 22-125 106-212 (376)
111 3jue_A Arfgap with coiled-coil 99.3 2.5E-12 8.6E-17 122.0 7.1 109 41-170 198-311 (368)
112 3lvq_E ARF-GAP with SH3 domain 99.2 8.3E-12 2.8E-16 122.9 7.7 107 43-169 133-249 (497)
113 2zgd_A 3 repeat synthetic anky 99.2 6.8E-11 2.3E-15 91.9 8.9 73 21-95 37-109 (110)
114 2aja_A Ankyrin repeat family p 99.1 3.4E-12 1.2E-16 121.4 -0.3 95 21-126 141-239 (376)
115 2iub_A CORA, divalent cation t 27.1 31 0.001 31.6 2.5 21 272-292 305-325 (363)
116 4ev6_A Magnesium transport pro 24.8 27 0.00092 31.6 1.6 21 272-292 281-301 (339)
117 1gp8_A Protein (scaffolding pr 20.7 70 0.0024 19.1 2.3 17 46-62 17-33 (40)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.78 E-value=1.1e-18 Score=148.02 Aligned_cols=128 Identities=17% Similarity=0.131 Sum_probs=102.5
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++|+.|++.. .|++..|.+|+||||+|+..|+.++++.|++.+.+. +.+|.+|+||||+|+.+|+.+++++|++.++
T Consensus 17 ~~~v~~Ll~~G-advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 94 (169)
T 4gpm_A 17 KDRVKDLIENG-ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGA 94 (169)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCHHHHHHHHHCcC
Confidence 36677788875 444455999999999999999999999999988764 5689999999999999999999999999986
Q ss_pred ccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
.++.+|.+|+||||+|+..|+.+ .++.++. ....+..| +|.||++++.+.
T Consensus 95 ---dvn~~d~~G~TpLh~A~~~g~~~-----------------~v~~Ll~~gad~~~~d~~G~TpL~~A~~~ 146 (169)
T 4gpm_A 95 ---DVNAKDSDGRTPLHHAAENGHKE-----------------VVKLLISKGADVNTSDSDGRTPLDLAREH 146 (169)
T ss_dssp ---CTTCCCTTSCCHHHHHHHTTCHH-----------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred ---CCCCCCCCCCCHHHHHHHcCCHH-----------------HHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 36667999999999999999842 2222221 12245567 999999997654
No 2
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.74 E-value=8.7e-18 Score=140.37 Aligned_cols=133 Identities=16% Similarity=0.082 Sum_probs=104.1
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.+++....+....+.+|+||||+|+..|+.++++.|++.+++. +.+|.+|+||||+|+..|+.+++++|++.+.
T Consensus 21 ~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 99 (165)
T 3twr_A 21 VETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSYGHYEVAELLVKHGA 99 (165)
T ss_dssp HHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHcCcHHHHHHHHhCCC
Confidence 467777777654555555888999999999999999999999987764 5689999999999999999999999999975
Q ss_pred ccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHHHHHH
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEEHKEL 174 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~~~~l 174 (339)
.++.+|.+|+||||+|+..++.+ .++.++. ....+.+| +|+||++++.+.+.+.
T Consensus 100 ---~~~~~~~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~i 155 (165)
T 3twr_A 100 ---VVNVADLWKFTPLHEAAAKGKYE-----------------ICKLLLQHGADPTKKNRDGNTPLDLVKDGDTDI 155 (165)
T ss_dssp ---CTTCCCTTCCCHHHHHHHTTCHH-----------------HHHHHHHTTCCTTCCCTTSCCTGGGSCTTCHHH
T ss_pred ---CCCCcCCCCCCHHHHHHHcCCHH-----------------HHHHHHHcCCCCcccCCCCCChhHhHhcCChHH
Confidence 35556999999999999999842 1222111 11234567 9999999987655543
No 3
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.73 E-value=3.3e-17 Score=138.96 Aligned_cols=130 Identities=16% Similarity=0.085 Sum_probs=103.1
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.+++....+.+..|.+|+||||+|+..|+.++++.|++.+.+. +.+|..|+||||+|+..|+.+++++|++.+.
T Consensus 18 ~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 96 (179)
T 3f6q_A 18 AVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHGHRDIVQKLLQYKA 96 (179)
T ss_dssp HHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 367788888764455555899999999999999999999999987664 5589999999999999999999999999985
Q ss_pred ccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHHH
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEEH 171 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~~ 171 (339)
.++.+|.+|+||||+|+..++.+ .++.++. ....+..| +|.||.+++.+..
T Consensus 97 ---~~~~~d~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 149 (179)
T 3f6q_A 97 ---DINAVNEHGNVPLHYACFWGQDQ-----------------VAEDLVANGALVSICNKYGEMPVDKAKAPL 149 (179)
T ss_dssp ---CTTCCCTTSCCHHHHHHHTTCHH-----------------HHHHHHHTTCCSSBCCTTSCCGGGGSCHHH
T ss_pred ---CCCccCCCCCCHHHHHHHcCCHH-----------------HHHHHHHCCCCcchhccCCCCcHHHHHHHH
Confidence 35566999999999999999841 1221111 11234567 9999999986643
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.72 E-value=2.1e-17 Score=139.95 Aligned_cols=99 Identities=17% Similarity=0.155 Sum_probs=85.7
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
++++.+++.. .+.+..|.+|+||||+|++.|+.++++.|++.+++. +.+|.+|+||||+|+.+|+.+++++|++.+++
T Consensus 51 ~~~~~ll~~g-ad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad 128 (169)
T 4gpm_A 51 EVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGAD 128 (169)
T ss_dssp HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHhcc-cchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5666677664 444445899999999999999999999999998774 66899999999999999999999999999863
Q ss_pred cccccccccCCCchHHHhhhcCCC
Q 047454 102 SNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 102 ~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
++.+|.+|+||||+|+..|+.
T Consensus 129 ---~~~~d~~G~TpL~~A~~~g~~ 149 (169)
T 4gpm_A 129 ---VNTSDSDGRTPLDLAREHGNE 149 (169)
T ss_dssp ---TTCCCTTSCCHHHHHHHTTCH
T ss_pred ---ccccCCCCCCHHHHHHHcCCH
Confidence 566699999999999999984
No 5
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.71 E-value=2.5e-17 Score=133.53 Aligned_cols=114 Identities=18% Similarity=0.118 Sum_probs=91.4
Q ss_pred cccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchH
Q 047454 37 QNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNIL 116 (339)
Q Consensus 37 ~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpL 116 (339)
..|.+|+||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..++.+++++|++.+. .++.+|.+|+|||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~---~~~~~~~~g~t~L 80 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKA---LVNTTGYQNDSPL 80 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCGGGCCHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---cccCcCCCCCCHH
Confidence 34889999999999999999999999987664 5689999999999999999999999999875 3555699999999
Q ss_pred HHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHHH
Q 047454 117 HFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEEH 171 (339)
Q Consensus 117 HlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~~ 171 (339)
|+|+..++.+ .++.++. ....+..| +|.||.+++.+..
T Consensus 81 ~~A~~~~~~~-----------------~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 120 (137)
T 3c5r_A 81 HDAAKNGHVD-----------------IVKLLLSYGASRNAVNIFGLRPVDYTDDES 120 (137)
T ss_dssp HHHHHTTCHH-----------------HHHHHHHTTCCTTCCCTTSCCGGGGCCCHH
T ss_pred HHHHHcCCHH-----------------HHHHHHHcCCCCCCCCCCCCCHHHHHhhcc
Confidence 9999998841 1221111 12245667 9999999986543
No 6
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.70 E-value=4.9e-17 Score=134.35 Aligned_cols=128 Identities=13% Similarity=0.065 Sum_probs=100.2
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.+++....+.+..|.+|+||||+ +..|+.++++.|++.+++. +.+|..|+||||+|+.+|+.+++++|++.+.
T Consensus 15 ~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 92 (156)
T 1bd8_A 15 VQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGFLDTLKVLVEHGA 92 (156)
T ss_dssp HHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 3566777776433555558899999999 9999999999999987664 5689999999999999999999999999975
Q ss_pred ccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcchhHHHhhc-CCCCcchhchHH
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVHPFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~~~~~~~~n-~g~tp~dl~~~~ 170 (339)
.++.+|.+|+||||+|+..|+.+ .++.++.....+..+ +|.||.+++.+.
T Consensus 93 ---~~~~~~~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~~~~~~~~~~g~t~l~~A~~~ 143 (156)
T 1bd8_A 93 ---DVNVPDGTGALPIHLAVQEGHTA-----------------VVSFLAAESDLHRRDARGLTPLELALQR 143 (156)
T ss_dssp ---CSCCCCTTSCCHHHHHHHHTCHH-----------------HHHHHHTTSCTTCCCTTSCCHHHHHHHS
T ss_pred ---CCCCcCCCCCcHHHHHHHhChHH-----------------HHHHHHhccCCCCcCCCCCCHHHHHHHc
Confidence 35566999999999999999841 222222222344566 999999987654
No 7
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.69 E-value=1.1e-16 Score=134.55 Aligned_cols=129 Identities=9% Similarity=-0.018 Sum_probs=100.7
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.+++....+.+..|.+|+||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..++.+++++|++.+.
T Consensus 15 ~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (172)
T 3v30_A 15 LDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGGYTDIVGLLLERDV 93 (172)
T ss_dssp HHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 467778887762223444889999999999999999999999998764 5588999999999999999999999999975
Q ss_pred ccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
.++.+|.+|+||||+|+..++.+ .++.++. ....+..+ +|.||++++...
T Consensus 94 ---~~~~~~~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 145 (172)
T 3v30_A 94 ---DINIYDWNGGTPLLYAVRGNHVK-----------------CVEALLARGADLTTEADSGYTPMDLAVAL 145 (172)
T ss_dssp ---CTTCCCTTSCCHHHHHHHTTCHH-----------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ---CCCCCCCCCCCHHHHHHHcCCHH-----------------HHHHHHHcCCCccccCCCCCCHHHHHHHh
Confidence 35566999999999999998842 1221111 11234566 899999987664
No 8
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.69 E-value=1.7e-16 Score=132.78 Aligned_cols=128 Identities=7% Similarity=-0.041 Sum_probs=100.3
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.+++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. +..|..|+||||+|+..|+.+++++|++.+.
T Consensus 16 ~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (167)
T 3v31_A 16 MLYLATRIEQE-NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSKGYTDIVKMLLDCGV 93 (167)
T ss_dssp HHHHHHHHHHS-SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HHHHHHHHHcC-CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 47778888775 334444889999999999999999999999987664 5588999999999999999999999999875
Q ss_pred ccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
.++.+|.+|+||||+|+..++.+ .++.++. ....+..+ +|.||.+++.+.
T Consensus 94 ---~~~~~~~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 94 ---DVNEYDWNGGTPLLYAVHGNHVK-----------------CVKMLLESGADPTIETDSGYNSMDLAVAL 145 (167)
T ss_dssp ---CTTCCCTTSCCHHHHHHHTTCHH-----------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ---CCCcCCCCCCCHHHHHHHcCCHH-----------------HHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 35556999999999999998842 1221111 11234566 999999987664
No 9
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.69 E-value=1.2e-16 Score=134.19 Aligned_cols=128 Identities=16% Similarity=0.081 Sum_probs=100.2
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|.||||+|++.|+.++++.|++.+.+. +..|..|+||||+|+..|+.+++++|++.+.
T Consensus 27 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 104 (169)
T 2y1l_E 27 DDEVRILMANG-ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALFGHLEIVEVLLKNGA 104 (169)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 46788888875 333444889999999999999999999999987664 5588999999999999999999999999975
Q ss_pred ccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
.++.+|.+|+||||+|+..++.+ .++.++. ....+..| +|.||.+++.+.
T Consensus 105 ---~~~~~~~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 156 (169)
T 2y1l_E 105 ---DVNANDMEGHTPLHLAAMFGHLE-----------------IVEVLLKNGADVNAQDKFGKTAFDISIDN 156 (169)
T ss_dssp ---CTTCCCTTSCCHHHHHHHTTCHH-----------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred ---CCCCCCCCCCCHHHHHHHcCCHH-----------------HHHHHHHcCCCCCCcCCCCCCHHHHHHHh
Confidence 35556999999999999998842 1111111 11234566 899999987654
No 10
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.69 E-value=6.5e-17 Score=122.39 Aligned_cols=81 Identities=20% Similarity=0.159 Sum_probs=72.0
Q ss_pred cCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhh
Q 047454 41 LLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGG 120 (339)
Q Consensus 41 ~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~ 120 (339)
+|+||||+|++.|+.++++.|++.+++. +.+|.+|+||||+|+.+|+.+++++|++.++ .++.+|.+|+||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga---~~~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA---DVNAKDKNGRTPLHLAA 76 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CCCccCCCCCCHHHHHH
Confidence 5899999999999999999999987764 6689999999999999999999999999986 35566999999999999
Q ss_pred hcCCC
Q 047454 121 KLVPS 125 (339)
Q Consensus 121 ~~~~~ 125 (339)
..++.
T Consensus 77 ~~~~~ 81 (93)
T 1n0q_A 77 RNGHL 81 (93)
T ss_dssp HTTCH
T ss_pred HcCCH
Confidence 99884
No 11
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.68 E-value=1e-16 Score=132.36 Aligned_cols=126 Identities=15% Similarity=0.117 Sum_probs=98.8
Q ss_pred HHHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 21 VEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.++++.|++.. +.+ .|.+|.||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..|+.+++++|++.+
T Consensus 15 ~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 90 (153)
T 1awc_B 15 DDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGHANIVEVLLKHG 90 (153)
T ss_dssp HHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred HHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHHcC
Confidence 46677788776 433 3788999999999999999999999987664 558999999999999999999999999997
Q ss_pred CccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
. .++.+|.+|+||||+|+..++.+ .++.++. ....+..| +|.||.+++.+.
T Consensus 91 ~---~~~~~~~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 143 (153)
T 1awc_B 91 A---DVNAKDMLKMTALHWATEHNHQE-----------------VVELLIKYGADVHTQSKFCKTAFDISIDN 143 (153)
T ss_dssp C---CTTCCCTTSCCHHHHHHHTTCHH-----------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred C---CCCCCCCCCCCHHHHHHHcCCHH-----------------HHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 5 35566999999999999998841 1221111 11234566 899999987654
No 12
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.68 E-value=1.4e-16 Score=139.43 Aligned_cols=102 Identities=16% Similarity=0.077 Sum_probs=60.1
Q ss_pred HHHHHHHHhcc-CCCCcc-ccccCCcHHHHHHHCCcHHHHHHHHHHCC-CCcccccCCCchHhhHHHHcCChHHHHHHHc
Q 047454 21 VEIVRIICKGV-IWNDPQ-NQQLLKKAFFKAATLGISKFVQEIIAAYK-GSVYWEDENKHTIFHVAVLHRRAEVFNLIYS 97 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~-~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p-~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~ 97 (339)
.++++.|++.. +.+... .|.+|+||||+|+..|+.++++.|++.++ ...+..|.+|+||||+|+..++.+++++|++
T Consensus 49 ~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 128 (228)
T 2dzn_A 49 HEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIE 128 (228)
T ss_dssp HHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHH
Confidence 35566666665 455544 35666666666666666666666666541 1234456666666666666666666666666
Q ss_pred ccCccccccccccCCCchHHHhhhcCCC
Q 047454 98 STFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 98 ~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.+. .++.+|.+|+||||+|+..|+.
T Consensus 129 ~g~---~~~~~~~~g~t~L~~A~~~~~~ 153 (228)
T 2dzn_A 129 NGA---SVRIKDKFNQIPLHRAASVGSL 153 (228)
T ss_dssp TTC---CSCCCCTTSCCHHHHHHHTTCH
T ss_pred cCC---CccccCCCCCCHHHHHHHcCCH
Confidence 653 2334466666666666666553
No 13
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.67 E-value=9e-17 Score=133.45 Aligned_cols=127 Identities=15% Similarity=0.061 Sum_probs=98.7
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+. |+.++++.|++.+++. +.+|..|+||||+|+.+|+.+++++|++.+.
T Consensus 18 ~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 94 (162)
T 1ihb_A 18 LEQLTSLLQNN-VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGFLDTLQTLLEFQA 94 (162)
T ss_dssp HHHHHHHTTSC-CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhCC-CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 46777788765 3344448899999999999 9999999999987664 5589999999999999999999999999875
Q ss_pred ccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcchh--HHHhhc-CCCCcchhchHH
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVHPF--LREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~~~--~~~~~n-~g~tp~dl~~~~ 170 (339)
.++.+|.+|+||||+|+..++.+ .++.++... ..+..+ +|.||++++.+.
T Consensus 95 ---~~~~~~~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~ 147 (162)
T 1ihb_A 95 ---DVNIEDNEGNLPLHLAAKEGHLR-----------------VVEFLVKHTASNVGHRNHKGDTACDLARLY 147 (162)
T ss_dssp ---CTTCCCTTSCCHHHHHHHTTCHH-----------------HHHHHHHHSCCCTTCCCTTSCCHHHHHHHT
T ss_pred ---CCCCcCCCCCCHHHHHHHcCCHH-----------------HHHHHHHccCCCCCCcCCCCCcHHHHHHHc
Confidence 35566999999999999999841 222222111 124556 899999987654
No 14
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.67 E-value=1.3e-16 Score=126.86 Aligned_cols=82 Identities=15% Similarity=0.018 Sum_probs=61.1
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHF 118 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHl 118 (339)
+..|.||||+|++.|+.++++.|++.+++. +.+|..|+||||+|+..++.+++++|++.+. .++.+|.+|+||||+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGA---DINAPDKHHITPLLS 79 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTC---CTTCCCTTSCCHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCC---CCCcCCCCCCCHHHH
Confidence 456778888888888888888888776653 5577788888888888888888888887764 245557788888888
Q ss_pred hhhcCC
Q 047454 119 GGKLVP 124 (339)
Q Consensus 119 A~~~~~ 124 (339)
|+..++
T Consensus 80 A~~~~~ 85 (123)
T 3aaa_C 80 AVYEGH 85 (123)
T ss_dssp HHHHTC
T ss_pred HHHcCC
Confidence 888777
No 15
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.67 E-value=3e-16 Score=127.18 Aligned_cols=100 Identities=12% Similarity=0.070 Sum_probs=85.7
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. +.+|.+|+||||+|+..++.+++++|++.++
T Consensus 27 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 104 (136)
T 2jab_A 27 DDEVRILMANG-ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAAFIGHLEIAEVLLKHGA 104 (136)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 36778888875 334444889999999999999999999999987664 5588999999999999999999999999975
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|+||||+|+..++.
T Consensus 105 ---~~~~~~~~g~tpl~~A~~~~~~ 126 (136)
T 2jab_A 105 ---DVNAQDKFGKTAFDISIGNGNE 126 (136)
T ss_dssp ---CTTCCCTTSCCHHHHHHHTTCH
T ss_pred ---CCcCcCCCCCCHHHHHHHCCCH
Confidence 3555699999999999999884
No 16
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.67 E-value=1.6e-16 Score=136.01 Aligned_cols=127 Identities=9% Similarity=-0.030 Sum_probs=94.0
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..++.+++++|++.+.
T Consensus 49 ~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~- 125 (192)
T 2rfm_A 49 NAIDKLVENF-DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGA- 125 (192)
T ss_dssp GGHHHHHHHH-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-
T ss_pred HHHHHHHHhc-cccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-
Confidence 5667777764 233334788999999999999999999999887664 5578889999999999999999999998875
Q ss_pred cccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 102 SNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 102 ~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
.++.+|.+|+||||+|+..++.+ .++.++. ....+..| +|.||.+++...
T Consensus 126 --~~~~~~~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 177 (192)
T 2rfm_A 126 --NVNDRNLEGETPLIVASKYGRSE-----------------IVKKLLELGADISARDLTGLTAEASARIF 177 (192)
T ss_dssp --CSSCCCTTCCCHHHHHHHHTCHH-----------------HHHHHHHTTCCTTCBCTTSCBHHHHHHHT
T ss_pred --CCCCCCCCCCCHHHHHHHcCCHH-----------------HHHHHHHCCCCCCCcCCCCCCHHHHHHHh
Confidence 35556889999999999988731 1222111 11234566 899999987654
No 17
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.66 E-value=2.5e-16 Score=125.28 Aligned_cols=97 Identities=11% Similarity=0.005 Sum_probs=82.3
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.+++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++ ++.+|.+|+||||+|+..++.+++++|++.++
T Consensus 20 ~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 97 (123)
T 3aaa_C 20 LDEVKDYVAKG-EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAVYEGHVSCVKLLLSKGA 97 (123)
T ss_dssp HHHHHHHHHTT-CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 36777788775 33444488999999999999999999999998776 45689999999999999999999999999985
Q ss_pred ccccccccccCCCchHHHhhhc
Q 047454 101 KSNWLGSNDNIRNNILHFGGKL 122 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~ 122 (339)
+ ++.+|.+|+||||+|...
T Consensus 98 ~---~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 98 D---KTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp C---TTCCCTTSCCHHHHCCCH
T ss_pred C---CCCcCCCCCCHHHHhCCH
Confidence 3 556699999999999544
No 18
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.65 E-value=3.1e-16 Score=141.43 Aligned_cols=118 Identities=13% Similarity=-0.071 Sum_probs=81.2
Q ss_pred CccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCc
Q 047454 35 DPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNN 114 (339)
Q Consensus 35 ~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnT 114 (339)
.+..|.+|+||||+|++.|+.++++.|++.+++.....+..|+||||+|+.+|+.+++++|++.|+ .++.+|.+|+|
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga---d~~~~d~~g~t 227 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA---DPTARMYGGRT 227 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCC
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCC---CCcccccCCCC
Confidence 334488999999999999999999999999887654333459999999999999999999999986 35666999999
Q ss_pred hHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhc-chhHHHhhc-CCCCcchhchHHHH
Q 047454 115 ILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLV-HPFLREAVN-NEQTPREVFTEEHK 172 (339)
Q Consensus 115 pLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~-~~~~~~~~n-~g~tp~dl~~~~~~ 172 (339)
|||+|+..++.+ .++.++ .......+| +|.||++.+.+...
T Consensus 228 pL~~A~~~~~~~-----------------~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 228 PLGSALLRPNPI-----------------LARLLRAHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHHHTSSCHH-----------------HHHHHHHTTCCCCCCC---------------
T ss_pred HHHHHHHcCCcH-----------------HHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence 999999999841 122111 111234567 99999998766543
No 19
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.65 E-value=3.1e-16 Score=142.47 Aligned_cols=99 Identities=11% Similarity=0.006 Sum_probs=67.9
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
.+++.|++.+ .+++..|.+|+||||+|+..|+.++++.|++.+++. ...+.+|+||+|+|+..++.+++++|++.+.
T Consensus 67 ~~v~~Ll~~G-advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~- 143 (269)
T 4b93_B 67 KRLAKVPASG-LGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNA- 143 (269)
T ss_dssp --------CC-CCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-
T ss_pred HHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCC-
Confidence 3556666654 444455889999999999999999999999887664 4466777777777777777777777777764
Q ss_pred cccccccccCCCchHHHhhhcCCC
Q 047454 102 SNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 102 ~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|+||||+|+..|+.
T Consensus 144 --~~n~~d~~g~TpL~~A~~~g~~ 165 (269)
T 4b93_B 144 --KPNKKDLSGNTPLIYACSGGHH 165 (269)
T ss_dssp --CSCCCCTTCCCHHHHHHHTTCG
T ss_pred --CCCCCCCCCCCHHHHHHHCCCH
Confidence 2444577777777777777765
No 20
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.65 E-value=1.3e-16 Score=129.23 Aligned_cols=115 Identities=12% Similarity=-0.002 Sum_probs=86.6
Q ss_pred CCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccC-C
Q 047454 34 NDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNI-R 112 (339)
Q Consensus 34 ~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~-G 112 (339)
+.+..|.+|.||||+|++.|+.++++.|++.+.+ ++.+|..|+||||+|+. ++.+++++|++.+. .++.+|.+ |
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~---~~~~~~~~~g 78 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGA---EPNCADPATL 78 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTC---CSSCCBTTTT
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCC---CCCCcCCCCC
Confidence 4445588899999999999999999999988765 35578899999999999 99999999999875 35556888 9
Q ss_pred CchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 113 NNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 113 nTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
+||||+|+..++.+ .++.++. ....+..+ +|.||++++.+.
T Consensus 79 ~t~L~~A~~~~~~~-----------------~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 121 (136)
T 1d9s_A 79 TRPVHDAAREGFLD-----------------TLVVLHRAGARLDVCDAWGRLPVDLAEEQ 121 (136)
T ss_dssp BCHHHHHHHHTCHH-----------------HHHHHHHTCCCCCCCSSSSSCHHHHHHHH
T ss_pred CCHHHHHHHcCCHH-----------------HHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 99999999988831 1121111 11234556 899999887553
No 21
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.64 E-value=5.3e-16 Score=136.40 Aligned_cols=133 Identities=14% Similarity=0.026 Sum_probs=99.5
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCc----ccccCCCchHhhHHHHcCChHHHHHHH
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSV----YWEDENKHTIFHVAVLHRRAEVFNLIY 96 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~----~~~d~~G~t~LH~A~~~~~~~iv~~Ll 96 (339)
.++++.|++..+.+.+..|.+|+||||+|+..|+.++++.|++.+++.. ..+|.+|+||||+|+.+|+.+++++|+
T Consensus 16 ~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 95 (232)
T 2rfa_A 16 VQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALL 95 (232)
T ss_dssp HHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 4778888887444555558999999999999999999999999987643 446779999999999999999999999
Q ss_pred cccCcccccc----------ccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcc
Q 047454 97 SSTFKSNWLG----------SNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPR 164 (339)
Q Consensus 97 ~~~~~~~~~~----------~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~ 164 (339)
+.+.+..... ..|.+|+||||+|+..|+.+ .++.++. ....+..+ +|.||+
T Consensus 96 ~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~ga~~~~~d~~g~t~L 158 (232)
T 2rfa_A 96 ARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEE-----------------IVRLLIEHGADIRAQDSLGNTVL 158 (232)
T ss_dssp HTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHH-----------------HHHHHHHTTCCTTCCCTTSCCHH
T ss_pred hCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHH-----------------HHHHHHHCCCCCCCCCCCCCCHH
Confidence 9876422111 11448999999999999842 1222111 11234566 999999
Q ss_pred hhchHH
Q 047454 165 EVFTEE 170 (339)
Q Consensus 165 dl~~~~ 170 (339)
+++...
T Consensus 159 ~~A~~~ 164 (232)
T 2rfa_A 159 HILILQ 164 (232)
T ss_dssp HHHHTC
T ss_pred HHHHHc
Confidence 887553
No 22
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.64 E-value=7.7e-16 Score=132.24 Aligned_cols=101 Identities=10% Similarity=0.019 Sum_probs=58.6
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
+.++.+++....+.+..|.+|+||||+|++.|+.++++.|++.+++. +.+|..|+||||+|+..|+.+++++|++.+.
T Consensus 19 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~- 96 (201)
T 3hra_A 19 KKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGRTEILAYMLKHAT- 96 (201)
T ss_dssp HHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC-
T ss_pred HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhccC-
Confidence 44555555443344444666666666666666666666666665443 3356666666666666666666666664331
Q ss_pred cccccccccCCCchHHHhhhcCCC
Q 047454 102 SNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 102 ~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
..++..|.+|+||||+|+..++.
T Consensus 97 -~~~~~~~~~g~t~L~~A~~~~~~ 119 (201)
T 3hra_A 97 -PDLNKHNRYGGNALIPAAEKGHI 119 (201)
T ss_dssp -CCTTCCCTTSCCSHHHHHHTTCH
T ss_pred -cccccccCCCCcHHHHHHHcCCH
Confidence 12333466666666666666653
No 23
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.64 E-value=8.7e-16 Score=140.09 Aligned_cols=78 Identities=12% Similarity=-0.051 Sum_probs=62.9
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|.||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..|+.+++++|++.++
T Consensus 53 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 130 (299)
T 1s70_B 53 TEEVLRLLERG-ADINYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLISQGA 130 (299)
T ss_dssp HHHHHHHHHHC-CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 36677777775 334444888999999999999999999999887664 5578889999999999999999999988765
No 24
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.64 E-value=3.7e-16 Score=126.63 Aligned_cols=99 Identities=10% Similarity=0.015 Sum_probs=85.6
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCC-CchHhhHHHHcCChHHHHHHHccc
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDEN-KHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~-G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.++++.|++.. .+.+..|.+|+||||+|+. |+.++++.|++.+++. +.+|.. |+||||+|+..|+.+++++|++.+
T Consensus 25 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 101 (136)
T 1d9s_A 25 VETVRQLLEAG-ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPVHDAAREGFLDTLVVLHRAG 101 (136)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTC
T ss_pred HHHHHHHHHcC-CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 57888888885 3444448999999999999 9999999999998774 558888 999999999999999999999998
Q ss_pred CccccccccccCCCchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ .++.+|.+|+||||+|+..++.
T Consensus 102 a---~~~~~d~~g~tpl~~A~~~~~~ 124 (136)
T 1d9s_A 102 A---RLDVCDAWGRLPVDLAEEQGHR 124 (136)
T ss_dssp C---CCCCCSSSSSCHHHHHHHHTCH
T ss_pred C---CCCccCCCCCCHHHHHHHcCCH
Confidence 5 3566699999999999999883
No 25
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.64 E-value=1.2e-15 Score=133.94 Aligned_cols=100 Identities=15% Similarity=0.086 Sum_probs=79.5
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..++.+++++|++.+.
T Consensus 53 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 130 (231)
T 3aji_A 53 TEIVEFLLQLG-VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGA 130 (231)
T ss_dssp HHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHhC-CCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 46777888774 333344788899999999999999999999887664 4578889999999999999999999998875
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|+||||+|+..|+.
T Consensus 131 ---~~~~~~~~g~t~L~~A~~~~~~ 152 (231)
T 3aji_A 131 ---NPDAKDHYDATAMHRAAAKGNL 152 (231)
T ss_dssp ---CTTCCCTTSCCHHHHHHHHTCH
T ss_pred ---CCCCcCCCCCcHHHHHHHcCCH
Confidence 2445588899999999888875
No 26
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.64 E-value=1.2e-15 Score=125.99 Aligned_cols=100 Identities=13% Similarity=0.018 Sum_probs=85.8
Q ss_pred HHHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 20 AVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 20 a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
..++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. +.+|.+|+||||+|+.+|+.+++++|++.
T Consensus 47 ~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~- 123 (156)
T 1bd8_A 47 STAIALELLKQG-ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE- 123 (156)
T ss_dssp CHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-
T ss_pred CHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc-
Confidence 357788888875 334444889999999999999999999999987664 56899999999999999999999999988
Q ss_pred CccccccccccCCCchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ .++.+|.+|+||||+|+..|+.
T Consensus 124 ~---~~~~~~~~g~t~l~~A~~~~~~ 146 (156)
T 1bd8_A 124 S---DLHRRDARGLTPLELALQRGAQ 146 (156)
T ss_dssp S---CTTCCCTTSCCHHHHHHHSCCH
T ss_pred c---CCCCcCCCCCCHHHHHHHcCcH
Confidence 4 3566699999999999999984
No 27
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.64 E-value=1.6e-15 Score=133.66 Aligned_cols=100 Identities=19% Similarity=0.137 Sum_probs=78.3
Q ss_pred HHHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 21 VEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.++++.|++.. +.+. .|.+|.||||+|+..|+.++++.|++.++...+..|..|+||||+|+..++.+++++|++.+
T Consensus 57 ~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 134 (237)
T 3b7b_A 57 LEAVKYLIKAGALVDP--KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG 134 (237)
T ss_dssp HHHHHHHHTTTCCCCC--CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCC--CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 46777777775 4333 37788888888888888888888888876666777888888888888888888888888887
Q ss_pred CccccccccccCCCchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
. .++.+|.+|+||||+|+..|+.
T Consensus 135 ~---~~~~~~~~g~t~L~~A~~~~~~ 157 (237)
T 3b7b_A 135 S---DINIRDNEENICLHWAAFSGCV 157 (237)
T ss_dssp C---CTTCCCTTSCCHHHHHHHHCCH
T ss_pred C---CCCccCCCCCCHHHHHHHCCCH
Confidence 5 2445588888888888888774
No 28
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.64 E-value=9.5e-16 Score=126.48 Aligned_cols=100 Identities=13% Similarity=0.117 Sum_probs=86.2
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+.+|+.+++++|++.++
T Consensus 47 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 124 (153)
T 1awc_B 47 FSTTEVLLRAG-VSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYGA 124 (153)
T ss_dssp HHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 47788888875 333444889999999999999999999999987764 5689999999999999999999999999986
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ ++.+|.+|+||||+|+..|+.
T Consensus 125 ~---~~~~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 125 D---VHTQSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp C---TTCCCTTSCCHHHHHHHTTCH
T ss_pred C---ccccCCCCCCHHHHHHHcCCH
Confidence 3 556699999999999999984
No 29
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.63 E-value=1.4e-15 Score=127.69 Aligned_cols=100 Identities=15% Similarity=0.011 Sum_probs=86.2
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+.+. +.+|..|+||||+|+.+|+.+++++|++.++
T Consensus 49 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 126 (172)
T 3v30_A 49 IETVRFLLEWG-ADPHILAKERESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLARGA 126 (172)
T ss_dssp HHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 47788888775 334444889999999999999999999999987764 5689999999999999999999999999985
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|+||||+|+..++.
T Consensus 127 ---~~~~~~~~g~t~l~~A~~~~~~ 148 (172)
T 3v30_A 127 ---DLTTEADSGYTPMDLAVALGYR 148 (172)
T ss_dssp ---CTTCCCTTSCCHHHHHHHHTCH
T ss_pred ---CccccCCCCCCHHHHHHHhCcH
Confidence 3555699999999999999984
No 30
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.63 E-value=1.2e-15 Score=130.04 Aligned_cols=99 Identities=16% Similarity=0.089 Sum_probs=83.1
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCccccc-CCCchHhhHHHHcCChHHHHHHHccc
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWED-ENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d-~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.++++.|++ +.+.+..|.+|+||||+|+..|+.++++.|++.+++... +| .+|+||||+|+..|+.+++++|++.+
T Consensus 57 ~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 133 (183)
T 3deo_A 57 EQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH-RDMRGGLTALHMAAGYVRPEVVEALVELG 133 (183)
T ss_dssp HHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCSSSSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCCHHHHHHhcCcHHHHHHHHHcC
Confidence 356777777 344455588999999999999999999999999877544 55 88999999999999999999999987
Q ss_pred CccccccccccCCCchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ .++.+|.+|+||||+|+..++.
T Consensus 134 a---~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 134 A---DIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp C---CTTCCCTTSCCHHHHHHHHHHT
T ss_pred C---CCcCCCCCCCCHHHHHHHhccC
Confidence 5 3556699999999999998764
No 31
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.63 E-value=9.9e-16 Score=134.67 Aligned_cols=101 Identities=12% Similarity=0.032 Sum_probs=83.9
Q ss_pred HHHHHHHHhcc-CC---CCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCccccc-------------CCCchHhhHH
Q 047454 21 VEIVRIICKGV-IW---NDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWED-------------ENKHTIFHVA 83 (339)
Q Consensus 21 ~~iv~~L~~~~-~~---~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d-------------~~G~t~LH~A 83 (339)
.++++.|++.. +. +....|.+|+||||+|+..|+.++++.|++.+++... .+ .+|+||||+|
T Consensus 50 ~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~~~~~~~~~~~~~g~t~L~~A 128 (232)
T 2rfa_A 50 LEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSA-RATGSVFHYRPHNLIYYGEHPLSFA 128 (232)
T ss_dssp HHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCSGGGSCCTTCSCCCCSSHHHHH
T ss_pred HHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCc-ccCCcceeecccccccCCCCHHHHH
Confidence 47788888876 32 2233378999999999999999999999999776533 33 3799999999
Q ss_pred HHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 84 VLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 84 ~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+..|+.+++++|++.++ .++.+|.+|+||||+|+..++.
T Consensus 129 ~~~~~~~~v~~Ll~~ga---~~~~~d~~g~t~L~~A~~~~~~ 167 (232)
T 2rfa_A 129 ACVGSEEIVRLLIEHGA---DIRAQDSLGNTVLHILILQPNK 167 (232)
T ss_dssp HHHTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHTCSCH
T ss_pred HHcCCHHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHcCCh
Confidence 99999999999999986 3566699999999999999984
No 32
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.63 E-value=1e-15 Score=137.10 Aligned_cols=101 Identities=10% Similarity=-0.012 Sum_probs=81.8
Q ss_pred HHHHHHHHhcc-C---------CCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCccccc--------------CCC
Q 047454 21 VEIVRIICKGV-I---------WNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWED--------------ENK 76 (339)
Q Consensus 21 ~~iv~~L~~~~-~---------~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d--------------~~G 76 (339)
.++++.|++.. + .+....|.+|+||||+|+..|+.++++.|++.+++. +.+| ..|
T Consensus 62 ~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g 140 (260)
T 3jxi_A 62 NDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFG 140 (260)
T ss_dssp CTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSC
T ss_pred HHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCC
Confidence 35666666654 2 223333668999999999999999999999988765 3455 589
Q ss_pred chHhhHHHHcCChHHHHHHHc---ccCccccccccccCCCchHHHhhhcCCC
Q 047454 77 HTIFHVAVLHRRAEVFNLIYS---STFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 77 ~t~LH~A~~~~~~~iv~~Ll~---~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+||||+|+..|+.+++++|++ .++ .++.+|.+|+||||+|+..++.
T Consensus 141 ~tpL~~A~~~g~~~~v~~Ll~~~~~ga---~~~~~d~~g~TpLh~A~~~~~~ 189 (260)
T 3jxi_A 141 ELPLSLAACTNQPHIVHYLTENGHKQA---DLRRQDSRGNTVLHALVAIADN 189 (260)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCC---CTTCCCTTSCCHHHHHHHHCCS
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCC---CCcccCCCCCcHHHHHHHhccC
Confidence 999999999999999999999 664 4666699999999999998773
No 33
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.63 E-value=1.3e-15 Score=134.29 Aligned_cols=101 Identities=13% Similarity=0.035 Sum_probs=74.9
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCC---CcccccCCCchHhhHHHHcCChHHHHHHHc
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKG---SVYWEDENKHTIFHVAVLHRRAEVFNLIYS 97 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~---~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~ 97 (339)
.++++.|++.. .+.+..|.+|.||||+|+..|+.++++.|++.++. ..+..|..|+||||+|+..++.+++++|++
T Consensus 59 ~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 137 (241)
T 1k1a_A 59 PSVVRLLVTAG-ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLE 137 (241)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHH
Confidence 36777777765 23333377888888888888888888888888762 345567788888888888888888888888
Q ss_pred ccCccccccccc-cCCCchHHHhhhcCCC
Q 047454 98 STFKSNWLGSND-NIRNNILHFGGKLVPS 125 (339)
Q Consensus 98 ~~~~~~~~~~~D-~~GnTpLHlA~~~~~~ 125 (339)
.+. .++..| .+|+||||+|+..++.
T Consensus 138 ~g~---~~~~~~~~~g~t~L~~A~~~~~~ 163 (241)
T 1k1a_A 138 RGA---DIDAVDIKSGRSPLIHAVENNSL 163 (241)
T ss_dssp TTC---CTTCCCTTTCCCHHHHHHHTTCH
T ss_pred cCC---CcccccccCCCcHHHHHHHcCCH
Confidence 764 244445 7788888888888775
No 34
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.63 E-value=1.2e-15 Score=126.57 Aligned_cols=102 Identities=15% Similarity=0.101 Sum_probs=86.9
Q ss_pred HHHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 20 AVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 20 a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
..++++.|++.. .+.+..|.+|+||||+|++.|+.++++.|++.+++. +.+|.+|+||||+|+..|+.+++++|++.+
T Consensus 49 ~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 126 (162)
T 1ihb_A 49 NPEIARRLLLRG-ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126 (162)
T ss_dssp CHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred cHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcc
Confidence 357888888885 334444889999999999999999999999987664 568999999999999999999999999998
Q ss_pred CccccccccccCCCchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
++ .++.+|.+|+||||+|+..++.
T Consensus 127 ~~--~~~~~~~~g~t~l~~A~~~~~~ 150 (162)
T 1ihb_A 127 AS--NVGHRNHKGDTACDLARLYGRN 150 (162)
T ss_dssp CC--CTTCCCTTSCCHHHHHHHTTCH
T ss_pred CC--CCCCcCCCCCcHHHHHHHcCCH
Confidence 53 2455599999999999999984
No 35
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.63 E-value=6.1e-16 Score=138.45 Aligned_cols=101 Identities=9% Similarity=0.067 Sum_probs=83.9
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.++...+.+|..|+||||+|+..++.+++++|++.+.
T Consensus 70 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 148 (253)
T 1yyh_A 70 SDAAKRLLEAS-ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHA 148 (253)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCC
Confidence 47788888875 33333488899999999999999999999998876667788899999999999999999999999875
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|+||||+|+..|+.
T Consensus 149 ---~~~~~d~~g~t~L~~A~~~~~~ 170 (253)
T 1yyh_A 149 ---DVNAVDDLGKSALHWAAAVNNV 170 (253)
T ss_dssp ---CTTCBCTTSCBHHHHHHHHTCH
T ss_pred ---CCCCcCCCCCCHHHHHHHcCCH
Confidence 3555688999999999998875
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.63 E-value=1.4e-15 Score=132.80 Aligned_cols=101 Identities=9% Similarity=0.067 Sum_probs=79.2
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.++...+..|..|+||||+|+..++.+++++|++.+.
T Consensus 38 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 116 (223)
T 2f8y_A 38 SDAAKRLLEAS-ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHA 116 (223)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCC
Confidence 46777777774 33333478888999999988998888888888776667778888889999988888888888888764
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|+||||+|+..++.
T Consensus 117 ---~~~~~~~~g~t~L~~A~~~~~~ 138 (223)
T 2f8y_A 117 ---DVNAVDDLGKSALHWAAAVNNV 138 (223)
T ss_dssp ---CTTCBCTTSCBHHHHHHHTTCH
T ss_pred ---CCcCcCCCCCcHHHHHHHcCCH
Confidence 3455588888999998888873
No 37
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.63 E-value=9.3e-16 Score=124.16 Aligned_cols=99 Identities=10% Similarity=0.034 Sum_probs=84.4
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+.+ .+.+|..|+||||+|+..++.+++++|++.++
T Consensus 23 ~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 100 (137)
T 3c5r_A 23 IPSVEYLLQNG-SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGA 100 (137)
T ss_dssp HHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 46778888875 33344488999999999999999999999998765 45689999999999999999999999999976
Q ss_pred ccccccccccCCCchHHHhhhcCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
+ ++.+|.+|+||||+|+..+.
T Consensus 101 ~---~~~~~~~g~tpl~~A~~~~~ 121 (137)
T 3c5r_A 101 S---RNAVNIFGLRPVDYTDDESM 121 (137)
T ss_dssp C---TTCCCTTSCCGGGGCCCHHH
T ss_pred C---CCCCCCCCCCHHHHHhhccH
Confidence 3 55669999999999987765
No 38
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.62 E-value=5.3e-16 Score=128.68 Aligned_cols=99 Identities=13% Similarity=0.058 Sum_probs=84.1
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCch-HhhHHHHcCChHHHHHHHccc
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHT-IFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t-~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.++++.|++.. .+.+..|.+|+||||+|+ .|+.++++.|++.+.+ ++.+|..|+| |||+|+.+|+.+++++|++.+
T Consensus 25 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~g 101 (156)
T 1bi7_B 25 VEEVRALLEAG-ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRAG 101 (156)
T ss_dssp HHHHHHHHTTT-CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHcC-CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcC
Confidence 47788888874 344444889999999985 9999999999998766 4568999999 999999999999999999997
Q ss_pred CccccccccccCCCchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ .++.+|.+|+||||+|+..++.
T Consensus 102 a---~~~~~d~~g~tpl~~A~~~~~~ 124 (156)
T 1bi7_B 102 A---RLDVRDAWGRLPVDLAEELGHR 124 (156)
T ss_dssp C---CSSCCCTTCCCHHHHHHHHTCH
T ss_pred C---CCcccCCCCCCHHHHHHHhCHH
Confidence 5 3566699999999999999983
No 39
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.62 E-value=6.8e-16 Score=140.22 Aligned_cols=98 Identities=10% Similarity=0.095 Sum_probs=60.8
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
++++.|++.. .+++..|.+|+||||+|++.|+.++++.|++.+.+. +.+|..|+||||+|+.+|+.+++++|++.|++
T Consensus 133 ~~~~~Ll~~g-~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad 210 (269)
T 4b93_B 133 QVVKCLLDSN-AKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASI-NASNNKGNTALHEAVIEKHVFVVELLLLHGAS 210 (269)
T ss_dssp HHHHHHHHTT-CCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcCCHHHHHHHHHCCCC
Confidence 3445555543 223333666777777777777777777777665553 44666777777777777777777777776642
Q ss_pred cccccccccCCCchHHHhhhcCC
Q 047454 102 SNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 102 ~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
++.+|.+|+||||+|+++++
T Consensus 211 ---~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 211 ---VQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp ---SCCCCTTSCCSGGGSCTTCH
T ss_pred ---CCCcCCCCCCHHHHHHhCCc
Confidence 44456677777777765543
No 40
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.62 E-value=2.5e-15 Score=135.70 Aligned_cols=101 Identities=9% Similarity=0.033 Sum_probs=82.5
Q ss_pred HHHHHHHHhcc-CC-------C--CccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccC--------------CC
Q 047454 21 VEIVRIICKGV-IW-------N--DPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDE--------------NK 76 (339)
Q Consensus 21 ~~iv~~L~~~~-~~-------~--~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~--------------~G 76 (339)
.++++.|++.. +. + ....|.+|+||||+|++.|+.++++.|++.+++. +.+|. .|
T Consensus 70 ~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g 148 (273)
T 2pnn_A 70 NDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFG 148 (273)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSC
T ss_pred hHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCC
Confidence 36777777764 21 1 1223678999999999999999999999998775 44555 79
Q ss_pred chHhhHHHHcCChHHHHHHHc---ccCccccccccccCCCchHHHhhhcCCC
Q 047454 77 HTIFHVAVLHRRAEVFNLIYS---STFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 77 ~t~LH~A~~~~~~~iv~~Ll~---~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+||||+|+.+|+.+++++|++ .++ .++.+|.+|+||||+|+..++.
T Consensus 149 ~tpL~~A~~~g~~~~v~~Ll~~~~~ga---d~~~~d~~g~tpLh~A~~~~~~ 197 (273)
T 2pnn_A 149 ELPLSLAACTNQLAIVKFLLQNSWQPA---DISARDSVGNTVLHALVEVADN 197 (273)
T ss_dssp BSHHHHHHHTTCHHHHHHHHHCSSCCC---CTTCCCTTSCCHHHHHHHHCCS
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccCCC---CceeeCCCCCcHHHHHHHccCc
Confidence 999999999999999999999 665 4666699999999999998873
No 41
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.62 E-value=1e-15 Score=137.04 Aligned_cols=104 Identities=16% Similarity=0.124 Sum_probs=76.2
Q ss_pred HHHHHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHc
Q 047454 19 QAVEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYS 97 (339)
Q Consensus 19 ~a~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~ 97 (339)
...++++.|++.. +.+ ...|.+|+||||+|++.|+.++++.|++.+++. +.+|..|+||||+|+..|+.+++++|++
T Consensus 34 ~~~~~v~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 111 (253)
T 1yyh_A 34 DAPAVISDFIYQGASLH-NQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIR 111 (253)
T ss_dssp -------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CChHHHHHHHHccCCcc-cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 3567888888876 332 223789999999999999999999999987764 5589999999999999999999999999
Q ss_pred ccCccccccccccCCCchHHHhhhcCCCC
Q 047454 98 STFKSNWLGSNDNIRNNILHFGGKLVPSS 126 (339)
Q Consensus 98 ~~~~~~~~~~~D~~GnTpLHlA~~~~~~~ 126 (339)
.+. ..++.+|.+|+||||+|+..++.+
T Consensus 112 ~~~--~~~~~~~~~g~t~L~~A~~~~~~~ 138 (253)
T 1yyh_A 112 NRA--TDLDARMHDGTTPLILAARLAVEG 138 (253)
T ss_dssp STT--SCTTCCCTTCCCHHHHHHHHTCSS
T ss_pred cCC--CCccccCCCCCcHHHHHHHcChHH
Confidence 874 235555999999999999999863
No 42
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.62 E-value=5.4e-16 Score=133.30 Aligned_cols=116 Identities=8% Similarity=-0.059 Sum_probs=89.3
Q ss_pred cccCCcHHHHHHHCCcH----HHHHHHHHHCCCCcccccCCCchHhhHHHHcCC------hHHHHHHHcccCcccccccc
Q 047454 39 QQLLKKAFFKAATLGIS----KFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRR------AEVFNLIYSSTFKSNWLGSN 108 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~----~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~------~~iv~~Ll~~~~~~~~~~~~ 108 (339)
|.+|+||||+|+.+|+. ++++.|++.+.+. +.+|.+|+||||+|+..++ .+++++|++.|+ .++.+
T Consensus 35 ~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Ga---din~~ 110 (186)
T 3t8k_A 35 SVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGA---DITAL 110 (186)
T ss_dssp HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTC---CSSSC
T ss_pred ccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCC---CCCcc
Confidence 37899999999999985 5899999988774 6689999999999999987 578999999986 46777
Q ss_pred ccCCC-chHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhc--chhHHHhhc-CCCCcchhchHH
Q 047454 109 DNIRN-NILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLV--HPFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 109 D~~Gn-TpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~--~~~~~~~~n-~g~tp~dl~~~~ 170 (339)
|.+|+ ||||+|+..+.... ...+.++.++ .....+.+| +|+||++++.+.
T Consensus 111 d~~g~ttpLh~A~~~~~~~~------------~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~ 164 (186)
T 3t8k_A 111 YKPYKIVVFKNIFNYFVDEN------------EMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRC 164 (186)
T ss_dssp BGGGTBCTTGGGGGCCSCHH------------HHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTT
T ss_pred CCCcCchHHHHHHHcCCChh------------hHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHc
Confidence 99999 99999999655210 0011222222 233456778 999999998764
No 43
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.61 E-value=2.2e-15 Score=131.48 Aligned_cols=129 Identities=12% Similarity=0.124 Sum_probs=101.6
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++....+.+..+.+|.||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..|+.+++++|++.+.
T Consensus 71 ~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 149 (223)
T 2f8y_A 71 QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGA 149 (223)
T ss_dssp HHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 478888888763344555889999999999999999999999987764 5588999999999999999999999999975
Q ss_pred ccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
.++.+|.+|+||||+|+..++.+ .++.++. ....+..+ .|.||.+++.+.
T Consensus 150 ---~~~~~~~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 201 (223)
T 2f8y_A 150 ---NKDMQNNREETPLFLAAREGSYE-----------------TAKVLLDHFANRDITDHMDRLPRDIAQER 201 (223)
T ss_dssp ---CTTCCCTTCCCHHHHHHHHTCHH-----------------HHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred ---CCCCcCCCCcCHHHHHHHcCCHH-----------------HHHHHHHcCCCCccccccCCCHHHHHHHh
Confidence 35556999999999999999841 1221111 11234566 899999987654
No 44
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.61 E-value=1.5e-15 Score=135.82 Aligned_cols=99 Identities=10% Similarity=0.004 Sum_probs=79.9
Q ss_pred HHHHHHHhcc-CCCC---------ccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCC-------------Cch
Q 047454 22 EIVRIICKGV-IWND---------PQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDEN-------------KHT 78 (339)
Q Consensus 22 ~iv~~L~~~~-~~~~---------~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~-------------G~t 78 (339)
++++.|++.. +.+. ...|.+|+||||+|+..|+.++++.|++.+++. +.+|.. |+|
T Consensus 60 ~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~t 138 (256)
T 2etb_A 60 ACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGEL 138 (256)
T ss_dssp TTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSS
T ss_pred HHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCC
Confidence 5677777765 3321 112567999999999999999999999998774 445654 999
Q ss_pred HhhHHHHcCChHHHHHHHc---ccCccccccccccCCCchHHHhhhcCC
Q 047454 79 IFHVAVLHRRAEVFNLIYS---STFKSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 79 ~LH~A~~~~~~~iv~~Ll~---~~~~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
|||+|+.+|+.+++++|++ .++ .++.+|.+|+||||+|+..++
T Consensus 139 pL~~A~~~~~~~~v~~Ll~~~~~ga---~~n~~d~~g~TpLh~A~~~~~ 184 (256)
T 2etb_A 139 PLSLAACTKQWDVVTYLLENPHQPA---SLEATDSLGNTVLHALVMIAD 184 (256)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCC---CTTCCCTTSCCHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHhccccCC---CcCccCCCCCCHHHHHHHccc
Confidence 9999999999999999999 665 466669999999999999543
No 45
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.61 E-value=5.6e-16 Score=125.52 Aligned_cols=111 Identities=19% Similarity=0.116 Sum_probs=88.4
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHF 118 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHl 118 (339)
+..|.||||+|++.|+.++++.|++.+++. +.+|..|+||||+|+.+++.+++++|++.+. .++.+|.+|+||||+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~d~~g~t~L~~ 86 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGA---DVNAVDAIGFTPLHL 86 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC---CTTCCCTTCCCHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CCCcCCCCCCCHHHH
Confidence 567899999999999999999999987764 5689999999999999999999999999975 355569999999999
Q ss_pred hhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 119 GGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 119 A~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
|+..++.+ .++.++. ....+..| +|.||++++.+.
T Consensus 87 A~~~~~~~-----------------~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~ 123 (136)
T 2jab_A 87 AAFIGHLE-----------------IAEVLLKHGADVNAQDKFGKTAFDISIGN 123 (136)
T ss_dssp HHHHTCHH-----------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHcCCHH-----------------HHHHHHHcCCCCcCcCCCCCCHHHHHHHC
Confidence 99999842 1221111 11234566 899999987654
No 46
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.61 E-value=1e-15 Score=135.14 Aligned_cols=128 Identities=16% Similarity=0.099 Sum_probs=88.0
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCC-----CcccccCCCchHhhHHHHcCChHHHHHHH
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKG-----SVYWEDENKHTIFHVAVLHRRAEVFNLIY 96 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~-----~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll 96 (339)
++++.|++.. .+.+..|.+|+||||+|++.|+.++++.|++.+++ .....|..|+||||+|+.+|+.+++++|+
T Consensus 59 ~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 137 (236)
T 1ikn_D 59 EIAEALLGAG-CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLV 137 (236)
T ss_dssp HHHHCCCSCC-CCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 5666666553 33344477888888888888888888888887643 24556778888888888888888888888
Q ss_pred cccCcccccccccc-CCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 97 SSTFKSNWLGSNDN-IRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 97 ~~~~~~~~~~~~D~-~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
+.++ .++.+|. +|+||||+|+..|+.+ .++.++. ....+..| +|.||++++.+.
T Consensus 138 ~~g~---~~~~~~~~~g~tpL~~A~~~~~~~-----------------~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 138 SLGA---DVNAQEPCNGRTALHLAVDLQNPD-----------------LVSLLLKCGADVNRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp HHTC---CTTCCCTTTCCCHHHHHHHTTCHH-----------------HHHHHHTTTCCSCCCCTTCCCGGGGCTTS
T ss_pred HcCC---CCCCCCCCCCCCHHHHHHHcCCHH-----------------HHHHHHHcCCCCCcccCCCCCHHHHHHcc
Confidence 8775 3555565 8888888888888731 2222211 11234556 889998887553
No 47
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.60 E-value=7.1e-16 Score=131.45 Aligned_cols=110 Identities=19% Similarity=0.118 Sum_probs=87.7
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccc-cCCCchHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSND-NIRNNILH 117 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D-~~GnTpLH 117 (339)
+.+|.||||+|++.|+.++++.|++ +.+ ++.+|.+|+||||+|+.+|+.+++++|++.++ .++.+| .+|+||||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga---~~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGA---DLDHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC---CTTCCCSSSSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CCCcCCCCCCCCHHH
Confidence 6789999999999999999999998 444 56689999999999999999999999999985 355665 89999999
Q ss_pred HhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 118 FGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 118 lA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
+|+..|+.+ .++.++. ....+.+| +|.||++++.+.
T Consensus 116 ~A~~~~~~~-----------------~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 116 MAAGYVRPE-----------------VVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHTTCHH-----------------HHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHhcCcHH-----------------HHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 999999842 1111111 11234567 899999887654
No 48
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.60 E-value=2.4e-15 Score=131.60 Aligned_cols=104 Identities=14% Similarity=0.033 Sum_probs=82.1
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHC--CCCcccccCCCchHhhHHHHcCChHHHHHHHcc
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAY--KGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSS 98 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~--p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~ 98 (339)
.++++.+++.........|.+|+||||+|++.|+.++++.|++.+ ++.....|..|+||||+|+..|+.+++++|++.
T Consensus 15 ~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 94 (228)
T 2dzn_A 15 FFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDR 94 (228)
T ss_dssp HHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSS
T ss_pred HHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 467777777761112223788999999999999999999999988 444333788999999999999999999999998
Q ss_pred cCccccccccccCCCchHHHhhhcCCC
Q 047454 99 TFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 99 ~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+. ...++.+|.+|+||||+|+..++.
T Consensus 95 g~-~~~~~~~~~~g~t~L~~A~~~~~~ 120 (228)
T 2dzn_A 95 PL-KPDLNKITNQGVTCLHLAVGKKWF 120 (228)
T ss_dssp SS-CCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred CC-CcccccCCcCCCCHHHHHHHcCCH
Confidence 62 123555589999999999998875
No 49
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.60 E-value=4.3e-15 Score=117.37 Aligned_cols=100 Identities=18% Similarity=0.179 Sum_probs=85.1
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|.||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..++.+++++|++.+.
T Consensus 15 ~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~ 92 (126)
T 1n0r_A 15 LEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (126)
T ss_dssp HHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHcChHHHHHHHHHcCC
Confidence 46778888775 333444889999999999999999999999987664 5588999999999999999999999999875
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|+||||+|+..++.
T Consensus 93 ---~~~~~~~~g~t~l~~A~~~~~~ 114 (126)
T 1n0r_A 93 ---DVNAKDKNGRTPLHLAARNGHL 114 (126)
T ss_dssp ---CTTCCCTTSCCHHHHHHHTTCH
T ss_pred ---CCcccCCCCCCHHHHHHHcCcH
Confidence 3555699999999999999884
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.60 E-value=7.8e-16 Score=137.64 Aligned_cols=138 Identities=14% Similarity=0.081 Sum_probs=101.7
Q ss_pred HhhhhhHHHH-HHHHHHHhcc-CCCCcc--ccccCCcHHHHHHHC---CcHHHHHHHHHHCCCCcc----------cccC
Q 047454 12 KEKVRNMQAV-EIVRIICKGV-IWNDPQ--NQQLLKKAFFKAATL---GISKFVQEIIAAYKGSVY----------WEDE 74 (339)
Q Consensus 12 ~~~~~~~~a~-~iv~~L~~~~-~~~~~~--~d~~g~tpLh~Aa~~---G~~~iv~~Ll~~~p~~~~----------~~d~ 74 (339)
+...++.+.+ .+++.+++.. +.+... .|.+|+||||+|+.. |+.++++.|++.+++... ..|.
T Consensus 9 A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~ 88 (256)
T 2etb_A 9 VVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFY 88 (256)
T ss_dssp HHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTT
T ss_pred HHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccc
Confidence 4455566555 5777777775 444411 388999999999999 999999999988654321 2357
Q ss_pred CCchHhhHHHHcCChHHHHHHHcccCccccccccccC-------------CCchHHHhhhcCCCCCcchhhhhhhHhhhH
Q 047454 75 NKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNI-------------RNNILHFGGKLVPSSEVAGAALQMQRKLEW 141 (339)
Q Consensus 75 ~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~-------------GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~ 141 (339)
+|+||||+|+..|+.+++++|++.+++ ++.+|.. |+||||+|+..|+.
T Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~---------------- 149 (256)
T 2etb_A 89 QGHSALHIAIEKRSLQCVKLLVENGAD---VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQW---------------- 149 (256)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCH----------------
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHcCCC---CCcccccccccccccccccCCCCHHHHHHHcCCH----------------
Confidence 899999999999999999999999863 4444554 99999999999983
Q ss_pred HHHHHhhcc----hhHHHhhc-CCCCcchhchH
Q 047454 142 FKAVENLVH----PFLREAVN-NEQTPREVFTE 169 (339)
Q Consensus 142 ~~~v~~~~~----~~~~~~~n-~g~tp~dl~~~ 169 (339)
+.++.++. ....+..+ +|.||+.++..
T Consensus 150 -~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 150 -DVVTYLLENPHQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp -HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred -HHHHHHHhccccCCCcCccCCCCCCHHHHHHH
Confidence 12222222 22345667 99999988764
No 51
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.60 E-value=2e-15 Score=118.46 Aligned_cols=83 Identities=17% Similarity=0.143 Sum_probs=75.2
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHF 118 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHl 118 (339)
|.+|+||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..++.+++++|++.++ .++.+|.+|+||||+
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~---~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA---DVNARSKDGNTPEHL 81 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTC---CTTCCCTTCCCTTHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC---CCcccCCCCCCHHHH
Confidence 88999999999999999999999998776 45689999999999999999999999999975 355569999999999
Q ss_pred hhhcCCC
Q 047454 119 GGKLVPS 125 (339)
Q Consensus 119 A~~~~~~ 125 (339)
|+..++.
T Consensus 82 A~~~~~~ 88 (115)
T 2l6b_A 82 AKKNGHH 88 (115)
T ss_dssp HHTTTCH
T ss_pred HHHCCCH
Confidence 9999883
No 52
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.60 E-value=1.9e-15 Score=137.55 Aligned_cols=129 Identities=12% Similarity=0.040 Sum_probs=82.4
Q ss_pred HHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccc----------------------------
Q 047454 22 EIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWE---------------------------- 72 (339)
Q Consensus 22 ~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~---------------------------- 72 (339)
+.++.+++.. +...+..|.+|+||||+|++.|+.++++.|++.++...+..
T Consensus 90 ~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~L 169 (276)
T 4hbd_A 90 VTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQL 169 (276)
T ss_dssp HHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHH
Confidence 3444444444 32334448888999999999999999999888876333333
Q ss_pred ----------cCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHH
Q 047454 73 ----------DENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWF 142 (339)
Q Consensus 73 ----------d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~ 142 (339)
|..|+||||+|+.+|+.+++++|++.|+ .++.+|.+|+||||+|+..|+.
T Consensus 170 l~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga---d~n~~d~~G~TpLh~A~~~g~~----------------- 229 (276)
T 4hbd_A 170 FRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEA---DVNVQDDDGSTALMCACEHGHK----------------- 229 (276)
T ss_dssp HHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHHTCH-----------------
T ss_pred HHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCC---CCCCCCCCCCCHHHHHHHCCCH-----------------
Confidence 3456677777777777777777777664 2444567777777777777662
Q ss_pred HHHHhhcc--hhHHHhhc-CCCCcchhchHH
Q 047454 143 KAVENLVH--PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 143 ~~v~~~~~--~~~~~~~n-~g~tp~dl~~~~ 170 (339)
+.++.++. ....+..| +|.||++++.+.
T Consensus 230 ~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 230 EIAGLLLAVPSCDISLTDRDGSTALMVALDA 260 (276)
T ss_dssp HHHHHHHTSTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHhcCCCCCcCcCCCCCCHHHHHHHc
Confidence 22333222 22345567 899999887654
No 53
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.59 E-value=4.2e-15 Score=123.93 Aligned_cols=98 Identities=13% Similarity=0.017 Sum_probs=83.9
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|++.|+.++++.|++.+.+. +.+|..|+||||+|+.+|+.+++++|++.++
T Consensus 55 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 132 (165)
T 3twr_A 55 VSVVEYLLQHG-ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQHGA 132 (165)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhcC-CCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 47888888875 334444889999999999999999999999987664 5589999999999999999999999999985
Q ss_pred ccccccccccCCCchHHHhhhcCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
.++.+|.+|+||||+|.. ++
T Consensus 133 ---~~~~~~~~g~t~l~~a~~-~~ 152 (165)
T 3twr_A 133 ---DPTKKNRDGNTPLDLVKD-GD 152 (165)
T ss_dssp ---CTTCCCTTSCCTGGGSCT-TC
T ss_pred ---CCcccCCCCCChhHhHhc-CC
Confidence 355669999999999877 65
No 54
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.59 E-value=2.2e-15 Score=140.43 Aligned_cols=102 Identities=11% Similarity=0.093 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHhcc---CCCCcc-ccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCC---h
Q 047454 17 NMQAVEIVRIICKGV---IWNDPQ-NQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRR---A 89 (339)
Q Consensus 17 ~~~a~~iv~~L~~~~---~~~~~~-~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~---~ 89 (339)
|.++.+.++.+.+.+ +.+.+. .|.+|+||||+|++.|+.++++.|++.+++. +.+|.+|+||||+|+.+|+ .
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHT
T ss_pred HHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccH
Confidence 556666666666655 566666 5999999999999999999999999998765 5689999999999999998 6
Q ss_pred HHHHHHHcccCccccccccccCCCchHHHhhh
Q 047454 90 EVFNLIYSSTFKSNWLGSNDNIRNNILHFGGK 121 (339)
Q Consensus 90 ~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~ 121 (339)
++++.|++.+. ..++.+|.+|+||||+|+.
T Consensus 181 ~~~~~ll~~~~--~~~~~~d~~g~tpLh~A~~ 210 (327)
T 1sw6_A 181 GTFEALLDYLY--PCLILEDSMNRTILHHIII 210 (327)
T ss_dssp TCHHHHHHHHG--GGGGEECTTCCCHHHHHHH
T ss_pred HHHHHHHHhhh--ccccCCCCCCCCHHHHHHH
Confidence 88888887752 2466669999999999998
No 55
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.59 E-value=6.4e-15 Score=123.65 Aligned_cols=100 Identities=15% Similarity=0.156 Sum_probs=86.2
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. +.+|.+|+||||+|+..++.+++++|++.++
T Consensus 60 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 137 (169)
T 2y1l_E 60 LEIVEVLLKNG-ADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLKNGA 137 (169)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 47888888875 333444889999999999999999999999987764 5589999999999999999999999999986
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ ++.+|.+|+||||+|+..++.
T Consensus 138 ~---~~~~~~~g~t~l~~A~~~~~~ 159 (169)
T 2y1l_E 138 D---VNAQDKFGKTAFDISIDNGNE 159 (169)
T ss_dssp C---TTCCCTTSCCHHHHHHHTTCH
T ss_pred C---CCCcCCCCCCHHHHHHHhCCH
Confidence 3 555699999999999999984
No 56
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.59 E-value=3.1e-15 Score=132.54 Aligned_cols=97 Identities=14% Similarity=0.104 Sum_probs=73.1
Q ss_pred HHHHhcc-CCCC-ccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCcc
Q 047454 25 RIICKGV-IWND-PQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKS 102 (339)
Q Consensus 25 ~~L~~~~-~~~~-~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~ 102 (339)
+.|+++. +.+. +..+.+|.||||+|++.|+.++++.|++.+++. +.+|.+|+||||+|+..|+.+++++|++.++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga-- 78 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAGA-- 78 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC--
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC--
Confidence 4455554 3222 223677889999999999999999999887764 5588899999999999999999999998875
Q ss_pred ccccccccCCCchHHHhhhcCCC
Q 047454 103 NWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 103 ~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|+||||+|+..|+.
T Consensus 79 -~~n~~d~~g~tpLh~A~~~g~~ 100 (229)
T 2vge_A 79 -NVNSPDSHGWTPLHCAASCNDT 100 (229)
T ss_dssp -CTTCCCTTCCCHHHHHHHTTCH
T ss_pred -CCCCCCCCCCCHHHHHHHcCCH
Confidence 3556688999999999998873
No 57
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.59 E-value=3.1e-15 Score=118.25 Aligned_cols=109 Identities=20% Similarity=0.168 Sum_probs=86.8
Q ss_pred cCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHHhh
Q 047454 41 LLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHFGG 120 (339)
Q Consensus 41 ~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~ 120 (339)
+|+||||+|++.|+.++++.|++.+++. +..|..|+||||+|+..++.+++++|++.+. .++.+|.+|+||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~---~~~~~~~~g~t~l~~A~ 76 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA---DVNAKDKNGRTPLHLAA 76 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCC---CCcccCCCCCcHHHHHH
Confidence 5899999999999999999999987764 5588999999999999999999999999875 35556999999999999
Q ss_pred hcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 121 KLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 121 ~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
..++.+ .++.++. ....+..| +|.||.+++.+.
T Consensus 77 ~~~~~~-----------------~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 111 (126)
T 1n0r_A 77 RNGHLE-----------------VVKLLLEAGADVNAKDKNGRTPLHLAARN 111 (126)
T ss_dssp HTTCHH-----------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HcChHH-----------------HHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 998831 1111111 11234556 899999887553
No 58
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.59 E-value=5.7e-15 Score=130.06 Aligned_cols=101 Identities=17% Similarity=0.084 Sum_probs=84.2
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|++.|+.++++.|++.+.+ .+.+|..|+||||+|+..|+.+++++|++.+.
T Consensus 24 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 101 (237)
T 3b7b_A 24 VDICHMLVQAG-ANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ 101 (237)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-CCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHHHcC-CCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 46788888875 33344488899999999999999999999988765 35588999999999999999999999999872
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
..++..|..|.||||+|+..++.
T Consensus 102 --~~~~~~~~~g~t~L~~A~~~~~~ 124 (237)
T 3b7b_A 102 --MDVNCQDDGGWTPMIWATEYKHV 124 (237)
T ss_dssp --CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred --CCcccCCCCCCCHHHHHHHcCCH
Confidence 24555589999999999999885
No 59
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.59 E-value=7.7e-15 Score=131.96 Aligned_cols=96 Identities=14% Similarity=0.083 Sum_probs=60.8
Q ss_pred HHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 22 EIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 22 ~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
++++.|++.. +.+. +.+|.||||+|++.|+.++++.|++.+++. +.+|.+|+||||+|+.+|+.+++++|++.++
T Consensus 83 ~~v~~Ll~~g~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 158 (261)
T 2xai_A 83 DCVNLLLQHGASVQP---ESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLESGA 158 (261)
T ss_dssp HHHHHHHHTTCCSSC---SCTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCCCCC---CCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 5666666664 3332 344667777777777777777777665543 4466677777777777777777777776664
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ + +.|.+|+||||+|+..++.
T Consensus 159 ~---~-~~~~~g~t~Lh~A~~~~~~ 179 (261)
T 2xai_A 159 D---V-NQGKGQDSPLHAVARTASE 179 (261)
T ss_dssp C---T-TCCBTTBCHHHHHHHHTCH
T ss_pred C---C-CCCCCCCChHHHHHHcCCH
Confidence 2 1 2366677777777766664
No 60
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.59 E-value=1.8e-15 Score=132.65 Aligned_cols=111 Identities=14% Similarity=0.175 Sum_probs=85.6
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcc-cCccccccccccCCCchHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSS-TFKSNWLGSNDNIRNNILH 117 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~-~~~~~~~~~~D~~GnTpLH 117 (339)
|.+|.||||+|+..|+.++++.|++.+.+ ++.+|..|+||||+|+.+|+.+++++|++. +. .++.+|.+|+||||
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~---~~~~~d~~g~tpL~ 145 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNI---ELNQQNKLGDTALH 145 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTC---CCCCCCTTSCCHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCC---CccccCCCCCCHHH
Confidence 66789999999999999999999987766 456888999999999999999999999987 54 35556999999999
Q ss_pred HhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 118 FGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 118 lA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
+|+..|+.+ .++.++. ....+..| +|.||++++...
T Consensus 146 ~A~~~~~~~-----------------~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 183 (222)
T 3ehr_A 146 AAAWKGYAD-----------------IVQLLLAKGARTDLRNIEKKLAFDMATNA 183 (222)
T ss_dssp HHHHHTCHH-----------------HHHHHHHHTCCSCCCCTTSCCHHHHCCSH
T ss_pred HHHHcCCHH-----------------HHHHHHHcCCCCccccCCCCCHHHHhcch
Confidence 999998831 1111111 11234567 899999887653
No 61
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.59 E-value=2.5e-15 Score=135.44 Aligned_cols=104 Identities=17% Similarity=0.092 Sum_probs=79.4
Q ss_pred HHHHHHHHhcc-CCC-CccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcc
Q 047454 21 VEIVRIICKGV-IWN-DPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSS 98 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~-~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~ 98 (339)
.++++.|++.. +.+ .+..|..|+||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..|+.+++++|++.
T Consensus 22 ~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 100 (282)
T 1oy3_D 22 EPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLACRVRAHTCACVLLQP 100 (282)
T ss_dssp HHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHTTTTCHHHHHHHSSS
T ss_pred HHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCcchhHhhhcc
Confidence 35677777765 322 3444888999999999999999999999887664 45788899999999999999999999886
Q ss_pred cCcc--------------------------------------------ccccccccCCCchHHHhhhcCCC
Q 047454 99 TFKS--------------------------------------------NWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 99 ~~~~--------------------------------------------~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
++.. ..++.+|.+|+||||+|+..|+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~ 171 (282)
T 1oy3_D 101 RPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDA 171 (282)
T ss_dssp CCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCH
Confidence 5320 11334488999999999988875
No 62
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.58 E-value=7.2e-15 Score=136.29 Aligned_cols=78 Identities=18% Similarity=0.100 Sum_probs=58.7
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. +..|..|+||||+|+.+|+.+++++|++.+.
T Consensus 71 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 148 (351)
T 3utm_A 71 VRIVQLLLQHG-ADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHGA 148 (351)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 36777777774 333334778888888888888888888888876654 4577888888888888888888888877543
No 63
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.58 E-value=7.5e-15 Score=122.61 Aligned_cols=100 Identities=13% Similarity=0.036 Sum_probs=86.5
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|.||||+|+..|+.++++.|++.+++. +.+|.+|+||||+|+..|+.+++++|++.++
T Consensus 49 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 126 (167)
T 3v31_A 49 IAVVEFLLQNG-ADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 126 (167)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 47888888885 334444889999999999999999999999997764 5589999999999999999999999999875
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ ++.+|.+|+||||+|+..|+.
T Consensus 127 ~---~~~~~~~g~t~l~~A~~~~~~ 148 (167)
T 3v31_A 127 D---PTIETDSGYNSMDLAVALGYR 148 (167)
T ss_dssp C---TTCCCTTSCCHHHHHHHHTCH
T ss_pred C---CCCcCCCCCCHHHHHHHcCcH
Confidence 3 555699999999999999984
No 64
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.58 E-value=6.6e-15 Score=132.41 Aligned_cols=99 Identities=12% Similarity=0.017 Sum_probs=84.9
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++.. .+.+|+||||+|+..|+.+++++|++.+.
T Consensus 49 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 125 (261)
T 2xai_A 49 LSCVKILLKHG-AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGG 125 (261)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 47788888885 3444448999999999999999999999999987753 46679999999999999999999999985
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|+||||+|+..++.
T Consensus 126 ---~~~~~~~~g~t~L~~A~~~~~~ 147 (261)
T 2xai_A 126 ---NIDHKISHLGTPLYLACENQQR 147 (261)
T ss_dssp ---CTTCCBTTTBCHHHHHHHTTCH
T ss_pred ---CCCcCCCCCCCHHHHHHHhCCH
Confidence 3556699999999999999885
No 65
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.58 E-value=6.6e-15 Score=126.33 Aligned_cols=101 Identities=8% Similarity=0.045 Sum_probs=83.9
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|.||||+|+..|+.++++.|++.++...+..|..|+||||+|+.+|+.+++++|++.+.
T Consensus 52 ~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 130 (201)
T 3hra_A 52 IEIAKALIDRG-ADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR 130 (201)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC
T ss_pred HHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 47788888875 33333488899999999999999999999977776677788999999999999999999999999872
Q ss_pred ccccccccccCCCchHHHhhhcCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
..++.+|.+|+||||+|+..++
T Consensus 131 --~~~~~~~~~g~t~L~~A~~~~~ 152 (201)
T 3hra_A 131 --EDIDFQNDFGYTALIEAVGLRE 152 (201)
T ss_dssp --CCTTCCCTTSCCHHHHHHHSSC
T ss_pred --CCcCCCCCCCCCHHHHHHHhcc
Confidence 2456668999999999998876
No 66
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.58 E-value=2.9e-15 Score=134.08 Aligned_cols=111 Identities=10% Similarity=0.031 Sum_probs=85.4
Q ss_pred HhhhhhHHHH-HHHHHHHhcc-CCCCccc--cccCCcHHHHHH---HCCcHHHHHHHHHHCCC----------CcccccC
Q 047454 12 KEKVRNMQAV-EIVRIICKGV-IWNDPQN--QQLLKKAFFKAA---TLGISKFVQEIIAAYKG----------SVYWEDE 74 (339)
Q Consensus 12 ~~~~~~~~a~-~iv~~L~~~~-~~~~~~~--d~~g~tpLh~Aa---~~G~~~iv~~Ll~~~p~----------~~~~~d~ 74 (339)
+...++.+.+ .+++.+.+.. +.+.... |.+|+||||+|+ +.|+.++++.|++.+.+ .....|.
T Consensus 12 A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~ 91 (260)
T 3jxi_A 12 IVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYY 91 (260)
T ss_dssp HHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSE
T ss_pred HHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccccccccc
Confidence 3334444444 5677777776 5555533 578999999999 78999999999997532 1234566
Q ss_pred CCchHhhHHHHcCChHHHHHHHcccCccccccccc--------------cCCCchHHHhhhcCCC
Q 047454 75 NKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSND--------------NIRNNILHFGGKLVPS 125 (339)
Q Consensus 75 ~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D--------------~~GnTpLHlA~~~~~~ 125 (339)
+|+||||+|+..|+.+++++|++.+++ ++.+| .+|+||||+|+..|+.
T Consensus 92 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~ 153 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVELLVEKGAD---VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQP 153 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCC---cCccccccccCcccccccccCCCCHHHHHHHcCCH
Confidence 999999999999999999999999863 44445 6899999999999984
No 67
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.58 E-value=2.4e-15 Score=117.56 Aligned_cols=83 Identities=19% Similarity=0.155 Sum_probs=74.3
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHF 118 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHl 118 (339)
|.+|.||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+.+|+.+++++|++.++ .++.+|.+|+||||+
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga---~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGA---DVXAQDKFGKTAFDI 96 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CccccccCCCcHHHH
Confidence 889999999999999999999999987664 5589999999999999999999999999975 355569999999999
Q ss_pred hhhcCCC
Q 047454 119 GGKLVPS 125 (339)
Q Consensus 119 A~~~~~~ 125 (339)
|+..++.
T Consensus 97 A~~~~~~ 103 (110)
T 2zgd_A 97 SIDNGNE 103 (110)
T ss_dssp HHHHTCH
T ss_pred HHHcCCH
Confidence 9999883
No 68
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.58 E-value=6.3e-15 Score=126.06 Aligned_cols=100 Identities=11% Similarity=-0.045 Sum_probs=86.3
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|.||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..|+.+++++|++.++
T Consensus 81 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 158 (192)
T 2rfm_A 81 LGIAEKLLSKG-SNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLELGA 158 (192)
T ss_dssp HHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 47788888875 333444889999999999999999999999987764 5689999999999999999999999999975
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|+||||+|+..++.
T Consensus 159 ---~~~~~~~~g~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 159 ---DISARDLTGLTAEASARIFGRQ 180 (192)
T ss_dssp ---CTTCBCTTSCBHHHHHHHTTCH
T ss_pred ---CCCCcCCCCCCHHHHHHHhCcH
Confidence 3556699999999999999984
No 69
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.58 E-value=4.1e-15 Score=132.89 Aligned_cols=98 Identities=16% Similarity=0.096 Sum_probs=83.3
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCccccc-CCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWED-ENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d-~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
++++.|++ +.+.+..|.+|+||||+|+..|+.++++.|++.+++... +| ..|+||||+|+.+|+.+++++|++.++
T Consensus 59 ~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 135 (244)
T 3ui2_A 59 QALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH-RDMRGGLTALHMAAGYVRPEVVEALVELGA 135 (244)
T ss_dssp HHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC-CCSSSCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 56677776 345555589999999999999999999999999877644 55 889999999999999999999999986
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|+||||+|+..++.
T Consensus 136 ---~~~~~d~~g~t~l~~A~~~~~~ 157 (244)
T 3ui2_A 136 ---DIEVEDERGLTALELAREILKT 157 (244)
T ss_dssp ---CTTCCCTTCCCHHHHHHHHHTT
T ss_pred ---CCCCCCCCCCcHHHHHHHHHhc
Confidence 3556699999999999987764
No 70
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.58 E-value=1.8e-15 Score=140.98 Aligned_cols=131 Identities=18% Similarity=0.157 Sum_probs=98.8
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCc---HHHHHHHHHHCCCCcccccCCCchHhhHHHH----cCChHHHH
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGI---SKFVQEIIAAYKGSVYWEDENKHTIFHVAVL----HRRAEVFN 93 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~---~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~----~~~~~iv~ 93 (339)
.++++.|++.. .+++..|.+|+||||+|+..|+ .++++.|++.....++.+|.+|+||||+|+. .|+.++++
T Consensus 144 ~~~v~~Ll~~G-ad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~ 222 (327)
T 1sw6_A 144 LELVKHLVKHG-SNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAK 222 (327)
T ss_dssp HHHHHHHHHTT-CCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHH
T ss_pred HHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHH
Confidence 47888899885 4444458999999999999999 7888888888755567899999999999999 89999999
Q ss_pred HHHcccC--------------------ccc----------------------cccccccCCCchHHHhhhcCCCCCcchh
Q 047454 94 LIYSSTF--------------------KSN----------------------WLGSNDNIRNNILHFGGKLVPSSEVAGA 131 (339)
Q Consensus 94 ~Ll~~~~--------------------~~~----------------------~~~~~D~~GnTpLHlA~~~~~~~~v~~~ 131 (339)
+|++.+. +.. .++.+|.+|+||||+|+..|+.+
T Consensus 223 ~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~----- 297 (327)
T 1sw6_A 223 YYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNIS----- 297 (327)
T ss_dssp HHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHH-----
T ss_pred HHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHH-----
Confidence 9987631 000 24555899999999999998831
Q ss_pred hhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchH
Q 047454 132 ALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTE 169 (339)
Q Consensus 132 ~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~ 169 (339)
.++.++. ....+.+| +|+||++++.+
T Consensus 298 ------------~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 298 ------------IVDALLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp ------------HHHHHHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred ------------HHHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 2222221 12345677 99999998753
No 71
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.58 E-value=6.1e-15 Score=129.36 Aligned_cols=100 Identities=11% Similarity=0.055 Sum_probs=81.7
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
+.++.+++......+..|.+|.||||+|+..|+.++++.|++.+.+. +.+|..|+||||+|+..|+.+++++|++.+.
T Consensus 20 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~- 97 (231)
T 3aji_A 20 DELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGXDEIVKALLVKGA- 97 (231)
T ss_dssp HHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-
T ss_pred HHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCHHHHHHHHHHcCC-
Confidence 56666666642223334888999999999999999999999987664 5588999999999999999999999999875
Q ss_pred cccccccccCCCchHHHhhhcCCC
Q 047454 102 SNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 102 ~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|.||||+|+..++.
T Consensus 98 --~~~~~~~~g~t~L~~A~~~~~~ 119 (231)
T 3aji_A 98 --HVNAVNQNGCTPLHYAASKNRH 119 (231)
T ss_dssp --CTTCCCTTSCCHHHHHHHTTCH
T ss_pred --CCCCCCCCCCCHHHHHHHcCCH
Confidence 3555689999999999999875
No 72
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.57 E-value=1.6e-14 Score=127.55 Aligned_cols=101 Identities=10% Similarity=0.048 Sum_probs=84.7
Q ss_pred HHHHHHHHhcc-CCC----CccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccC-CCchHhhHHHHcCChHHHHH
Q 047454 21 VEIVRIICKGV-IWN----DPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDE-NKHTIFHVAVLHRRAEVFNL 94 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~----~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~-~G~t~LH~A~~~~~~~iv~~ 94 (339)
.++++.|++.. ... .+..|.+|.||||+|+..|+.++++.|++.+++. +.+|. .|+||||+|+..|+.+++++
T Consensus 91 ~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~ 169 (236)
T 1ikn_D 91 LASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLAVDLQNPDLVSL 169 (236)
T ss_dssp HHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 46778888775 211 2333888999999999999999999999998775 44666 99999999999999999999
Q ss_pred HHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 95 IYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 95 Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
|++.|++ ++.+|.+|+||||+|+..++.
T Consensus 170 Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~ 197 (236)
T 1ikn_D 170 LLKCGAD---VNRVTYQGYSPYQLTWGRPST 197 (236)
T ss_dssp HHTTTCC---SCCCCTTCCCGGGGCTTSSCH
T ss_pred HHHcCCC---CCcccCCCCCHHHHHHccCch
Confidence 9999863 556699999999999999884
No 73
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.57 E-value=3.6e-15 Score=130.65 Aligned_cols=100 Identities=10% Similarity=0.057 Sum_probs=85.4
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.....++.+|.+|+||||+|+..|+.+++++|++.++
T Consensus 86 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 164 (222)
T 3ehr_A 86 LSWLRECLDNR-VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGA 164 (222)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HHHHHHHHhCC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 46788888875 33444488999999999999999999999998444467789999999999999999999999999986
Q ss_pred ccccccccccCCCchHHHhhhcCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
+ ++.+|.+|+||||+|+..++
T Consensus 165 ~---~~~~~~~g~t~l~~A~~~~~ 185 (222)
T 3ehr_A 165 R---TDLRNIEKKLAFDMATNAAC 185 (222)
T ss_dssp C---SCCCCTTSCCHHHHCCSHHH
T ss_pred C---CccccCCCCCHHHHhcchhH
Confidence 3 55669999999999998776
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.57 E-value=6.8e-15 Score=124.54 Aligned_cols=99 Identities=10% Similarity=0.010 Sum_probs=85.4
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. +.+|.+|+||||+|+..++.+++++|++.++
T Consensus 52 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 129 (179)
T 3f6q_A 52 SAVVEMLIMRG-ARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVANGA 129 (179)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 37788888885 334444889999999999999999999999987764 5689999999999999999999999999986
Q ss_pred ccccccccccCCCchHHHhhhcCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
+ ++.+|.+|+||||+|+..++
T Consensus 130 ~---~~~~~~~g~tpl~~A~~~~~ 150 (179)
T 3f6q_A 130 L---VSICNKYGEMPVDKAKAPLR 150 (179)
T ss_dssp C---SSBCCTTSCCGGGGSCHHHH
T ss_pred C---cchhccCCCCcHHHHHHHHH
Confidence 3 55569999999999988766
No 75
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.56 E-value=1.1e-14 Score=132.82 Aligned_cols=100 Identities=11% Similarity=0.006 Sum_probs=83.5
Q ss_pred HHHHHHHhcc-CCC----CccccccCCcHHHHHHHC---CcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHH
Q 047454 22 EIVRIICKGV-IWN----DPQNQQLLKKAFFKAATL---GISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFN 93 (339)
Q Consensus 22 ~iv~~L~~~~-~~~----~~~~d~~g~tpLh~Aa~~---G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~ 93 (339)
+.+..+++.. +.+ .+..|..|+||||+|+.. |+.++++.|++.+++. +.+|.+|+||||+|+.+|+.++++
T Consensus 144 ~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh~A~~~g~~~~v~ 222 (278)
T 1dcq_A 144 FGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALHYCCLTDNAECLK 222 (278)
T ss_dssp HHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHHHHHHHcCCHHHHH
Confidence 3455555554 332 233378899999999999 9999999999998774 568999999999999999999999
Q ss_pred HHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 94 LIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 94 ~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+|++.|+ .++.+|.+|+||||+|+..|+.
T Consensus 223 ~Ll~~ga---d~~~~d~~g~tpL~~A~~~~~~ 251 (278)
T 1dcq_A 223 LLLRGKA---SIEIANESGETPLDIAKRLKHE 251 (278)
T ss_dssp HHHHTTC---CTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHcCC---CCCCccCCCCCHHHHHHHcCCH
Confidence 9999986 3666799999999999999984
No 76
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.56 E-value=8.2e-15 Score=141.13 Aligned_cols=98 Identities=12% Similarity=0.104 Sum_probs=58.5
Q ss_pred HHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 22 EIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 22 ~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
++++.|++.. +.+. .+.+|.||||+|++.|+.++++.|++.+++. +..|..|+||||+|+..|+.+++++|++.+.
T Consensus 226 ~~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 302 (437)
T 1n11_A 226 EVARSLLQYGGSANA--ESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIKHGV 302 (437)
T ss_dssp HHHHHHHHTTCCTTC--CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCCCC--CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCc
Confidence 5556666554 3322 2556666666666666666666666655443 3356666666666666666666666666653
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|..|+||||+|+..|+.
T Consensus 303 ---~~~~~~~~g~t~L~~A~~~g~~ 324 (437)
T 1n11_A 303 ---MVDATTRMGYTPLHVASHYGNI 324 (437)
T ss_dssp ---CTTCCCSSCCCHHHHHHHSSCS
T ss_pred ---cCCCCCCCCCCHHHHHHHcCcH
Confidence 2333466666666666666654
No 77
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.56 E-value=1.3e-14 Score=131.90 Aligned_cols=102 Identities=17% Similarity=0.131 Sum_probs=85.7
Q ss_pred HHHHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHc-
Q 047454 19 QAVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYS- 97 (339)
Q Consensus 19 ~a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~- 97 (339)
...++++.+++.. .+....|.+|+||||+|+..|+.++++.|++.+++. +.+|.+|+||||+|+.+|+.+++++|++
T Consensus 161 ~~~~~v~~Ll~~g-~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 238 (276)
T 4hbd_A 161 DDIETVLQLFRLG-NINAKASQAGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCACEHGHKEIAGLLLAV 238 (276)
T ss_dssp HHHHHHHHHHHHS-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHTS
T ss_pred hhHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhc
Confidence 4457777777775 222233788999999999999999999999998774 5689999999999999999999999999
Q ss_pred ccCccccccccccCCCchHHHhhhcCCC
Q 047454 98 STFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 98 ~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++ .++.+|.+|+||||+|+..|+.
T Consensus 239 ~ga---d~~~~d~~g~TpL~~A~~~g~~ 263 (276)
T 4hbd_A 239 PSC---DISLTDRDGSTALMVALDAGQS 263 (276)
T ss_dssp TTC---CTTCCCTTSCCHHHHHHHHTCH
T ss_pred CCC---CCcCcCCCCCCHHHHHHHcCCH
Confidence 664 3556699999999999999984
No 78
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.55 E-value=1e-14 Score=129.28 Aligned_cols=100 Identities=13% Similarity=-0.022 Sum_probs=84.5
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+.+. +.+|..|+||||+|+.+|+.+++++|++.++
T Consensus 34 ~~~v~~Ll~~g-~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga 111 (229)
T 2vge_A 34 LEVVQQAVKEM-NDPSQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHCAASCNDTVICMALVQHGA 111 (229)
T ss_dssp HHHHHHHHHHS-SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 47778888775 344445899999999999999999999999987664 5689999999999999999999999999986
Q ss_pred ccccccccc-cCCCchHHHh--hhcCCC
Q 047454 101 KSNWLGSND-NIRNNILHFG--GKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D-~~GnTpLHlA--~~~~~~ 125 (339)
.++.+| .+|+||||+| +..++.
T Consensus 112 ---~~~~~~~~~g~tpL~~A~a~~~~~~ 136 (229)
T 2vge_A 112 ---AIFATTLSDGATAFEKCDPYREGYA 136 (229)
T ss_dssp ---CTTCCCSSTTCCTGGGCCTTSTTHH
T ss_pred ---CcccccCCCCCCHHHHHHHHhcChH
Confidence 355664 6999999999 777764
No 79
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.55 E-value=8.7e-15 Score=137.67 Aligned_cols=115 Identities=13% Similarity=0.108 Sum_probs=91.1
Q ss_pred ccccCCcHHHHHHHCC--cHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccc--cccccccCCC
Q 047454 38 NQQLLKKAFFKAATLG--ISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSN--WLGSNDNIRN 113 (339)
Q Consensus 38 ~d~~g~tpLh~Aa~~G--~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~--~~~~~D~~Gn 113 (339)
.|.+|.||||+|+..| +.++++.|++.+.+. +.+|..|+||||+|+.+|+.+++++|++.+++.. .++.+|.+|+
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~ 212 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN 212 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCC
Confidence 5788999999999999 999999999997664 5689999999999999999999999999875311 1455599999
Q ss_pred chHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 114 NILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 114 TpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
||||+|+..|+.+ .++.++. ....+..| +|.||++++.+.
T Consensus 213 t~L~~A~~~g~~~-----------------~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 254 (364)
T 3ljn_A 213 SHLHWAILINWED-----------------VAMRFVEMGIDVNMEDNEHTVPLYLSVRA 254 (364)
T ss_dssp CTTHHHHTTTCHH-----------------HHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cHHHHHHHcCCHH-----------------HHHHHHHcCCCCCCCCCCCCCHHHHHHHh
Confidence 9999999999842 2222221 12245667 999999987654
No 80
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.55 E-value=1.8e-14 Score=133.06 Aligned_cols=100 Identities=15% Similarity=0.099 Sum_probs=83.2
Q ss_pred HHHHHHHhcc-CCCCc----cccccCCcHHHHHHHC---CcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHH
Q 047454 22 EIVRIICKGV-IWNDP----QNQQLLKKAFFKAATL---GISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFN 93 (339)
Q Consensus 22 ~iv~~L~~~~-~~~~~----~~d~~g~tpLh~Aa~~---G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~ 93 (339)
+.++.+++.. +.+.. ..|.+|+||||+|+.. |+.++++.|++.+++. +.+|.+|+||||+|+..|+.++++
T Consensus 165 ~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~ 243 (301)
T 2b0o_E 165 LSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLK 243 (301)
T ss_dssp HHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHH
Confidence 3455666664 44331 0378899999999997 8999999999998764 568999999999999999999999
Q ss_pred HHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 94 LIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 94 ~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+|++.+++ ++.+|.+|+||||+|+..++.
T Consensus 244 ~Ll~~gad---~~~~d~~G~TpL~~A~~~~~~ 272 (301)
T 2b0o_E 244 LLLKGRAL---VGTVNEAGETALDIARKKHHK 272 (301)
T ss_dssp HHHHTTCC---CSCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHcCCC---CCCcCCCCCCHHHHHHHcCCH
Confidence 99999863 566699999999999999983
No 81
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.55 E-value=1.3e-14 Score=134.44 Aligned_cols=100 Identities=15% Similarity=0.015 Sum_probs=85.3
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
+.++.+++..+.+.+..|.+|+||||+|+..|+.++++.|++.+++. +.+|.+|+||||+|+..|+.+++++|++.+.
T Consensus 38 ~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~- 115 (351)
T 3utm_A 38 EKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELLLKHGA- 115 (351)
T ss_dssp HHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-
T ss_pred HHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHHHHCCC-
Confidence 45666665545555556899999999999999999999999987764 5689999999999999999999999999975
Q ss_pred cccccccccCCCchHHHhhhcCCC
Q 047454 102 SNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 102 ~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|.||||+|+..|+.
T Consensus 116 --~~~~~~~~g~t~L~~A~~~~~~ 137 (351)
T 3utm_A 116 --CVNAMDLWQFTPLHEAASKNRV 137 (351)
T ss_dssp --CTTCCCTTCCCHHHHHHHTTCH
T ss_pred --CCCCCCCCCCCHHHHHHHcCCH
Confidence 3555699999999999999984
No 82
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.55 E-value=1.3e-14 Score=129.00 Aligned_cols=100 Identities=13% Similarity=-0.012 Sum_probs=81.4
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+.+. +.+|.+|+||||+|+.+|+.+++++|++.++
T Consensus 50 ~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 127 (239)
T 1ycs_B 50 FDLVQRIIYEV-DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVESGA 127 (239)
T ss_dssp HHHHHHHTSTT-SSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 36777787775 244444889999999999999999999999987764 6689999999999999999999999999986
Q ss_pred ccccccccccCCC-chHHHh--hhcCCC
Q 047454 101 KSNWLGSNDNIRN-NILHFG--GKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~Gn-TpLHlA--~~~~~~ 125 (339)
.++.+|.+|. ||||+| +..|+.
T Consensus 128 ---~~~~~~~~~~~t~l~~a~~~~~g~~ 152 (239)
T 1ycs_B 128 ---AVFAMTYSDMQTAADKCEEMEEGYT 152 (239)
T ss_dssp ---CTTCCCSSSCCCHHHHCCSSSTTCC
T ss_pred ---CcceecCCCCcchHHHHHHhhhccH
Confidence 3555666665 999999 566664
No 83
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.55 E-value=3.1e-15 Score=133.67 Aligned_cols=109 Identities=19% Similarity=0.127 Sum_probs=86.5
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccc-cCCCchHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSND-NIRNNILH 117 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D-~~GnTpLH 117 (339)
+.+|.||||+|++.|+.++++.|++ +.+ ++.+|.+|+||||+|+.+|+.+++++|++.++ .++.+| .+|+||||
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga---~~~~~~~~~g~t~L~ 116 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGA---DLDHRDMRGGLTALH 116 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC---CTTCCCSSSCCCHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC---CCCcCCCCCCCCHHH
Confidence 5689999999999999999999998 544 56689999999999999999999999999986 355665 88999999
Q ss_pred HhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchH
Q 047454 118 FGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTE 169 (339)
Q Consensus 118 lA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~ 169 (339)
+|+..|+.+ .++.++. ....+..| +|.||++++.+
T Consensus 117 ~A~~~g~~~-----------------~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 117 MAAGYVRPE-----------------VVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHHHTTCHH-----------------HHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHcCCHH-----------------HHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 999999842 1221111 11234566 88899888754
No 84
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.54 E-value=2.5e-14 Score=125.93 Aligned_cols=110 Identities=15% Similarity=0.058 Sum_probs=84.8
Q ss_pred HhhhhhHHHHHHHHHHHhc---cCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCC
Q 047454 12 KEKVRNMQAVEIVRIICKG---VIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRR 88 (339)
Q Consensus 12 ~~~~~~~~a~~iv~~L~~~---~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~ 88 (339)
+...++.+. ++.|++. .+.+.+..|.+|+||||+|+..|+.++++.|++.+.+. +..|..|+||||+|+..++
T Consensus 16 A~~~g~~~~---v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~ 91 (241)
T 1k1a_A 16 AVVQGNLPA---VHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLACEHRS 91 (241)
T ss_dssp HHHTTCHHH---HHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred HHHcCCHHH---HHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCC
Confidence 334444444 4444442 24445555889999999999999999999999987664 5578999999999999999
Q ss_pred hHHHHHHHcccCccc-cccccccCCCchHHHhhhcCCC
Q 047454 89 AEVFNLIYSSTFKSN-WLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 89 ~~iv~~Ll~~~~~~~-~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.+++++|++.+.... .++..|.+|+||||+|+..++.
T Consensus 92 ~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 129 (241)
T 1k1a_A 92 PTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ 129 (241)
T ss_dssp HHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCH
Confidence 999999999874221 2344489999999999999885
No 85
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.54 E-value=1.6e-14 Score=135.94 Aligned_cols=102 Identities=10% Similarity=0.121 Sum_probs=88.9
Q ss_pred HHHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCC----cccccCCCchHhhHHHHcCChHHHHHH
Q 047454 20 AVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGS----VYWEDENKHTIFHVAVLHRRAEVFNLI 95 (339)
Q Consensus 20 a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~----~~~~d~~G~t~LH~A~~~~~~~iv~~L 95 (339)
..++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. ++..|..|+||||+|+.+|+.+++++|
T Consensus 152 ~~~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 230 (364)
T 3ljn_A 152 YLEMIKILVQLG-ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRF 230 (364)
T ss_dssp GHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHH
T ss_pred hHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHH
Confidence 457888888885 444444899999999999999999999999998773 566899999999999999999999999
Q ss_pred HcccCccccccccccCCCchHHHhhhcCCC
Q 047454 96 YSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 96 l~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
++.|++ ++.+|.+|+||||+|+..|+.
T Consensus 231 l~~gad---~~~~d~~g~tpL~~A~~~g~~ 257 (364)
T 3ljn_A 231 VEMGID---VNMEDNEHTVPLYLSVRAAMV 257 (364)
T ss_dssp HTTTCC---TTCCCTTSCCHHHHHHHTCCH
T ss_pred HHcCCC---CCCCCCCCCCHHHHHHHhChH
Confidence 999863 566699999999999999984
No 86
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.54 E-value=2.3e-14 Score=130.82 Aligned_cols=99 Identities=12% Similarity=0.017 Sum_probs=73.0
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++.. .+.+|+||||+|+..|+.+++++|++.+.
T Consensus 105 ~~~v~~Ll~~g-a~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 181 (285)
T 3d9h_A 105 LSCVKILLKHG-AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGG 181 (285)
T ss_dssp HHHHHHHHHTT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTSCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 36777777764 3333347788888888888888888888888766542 34558888888888888888888888764
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|+||||+|+..++.
T Consensus 182 ---~~~~~d~~g~t~L~~A~~~~~~ 203 (285)
T 3d9h_A 182 ---NIDHKISHLGTPLYLACENQQR 203 (285)
T ss_dssp ---CTTCCBTTTBCHHHHHHHTTCH
T ss_pred ---CCCCcCCCCCCHHHHHHHcCcH
Confidence 3445578888888888888775
No 87
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.54 E-value=4.4e-15 Score=132.00 Aligned_cols=98 Identities=14% Similarity=0.027 Sum_probs=73.0
Q ss_pred HHHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 21 VEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.+.++.+++.. +.+. +..|.||||.|+..|+.++++.|++.+++ .+.+|.+|+||||+|+.+|+.+++++|++.+
T Consensus 18 ~~~~~~ll~~g~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 93 (239)
T 1ycs_B 18 RKTGSERIAHGMRVKF---NPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITALHNAVCAGHTEIVKFLVQFG 93 (239)
T ss_dssp ----------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHhccCCCccc---CchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 35666777765 4443 46689999999999999999999998775 4668999999999999999999999999997
Q ss_pred CccccccccccCCCchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ .++.+|.+|+||||+|+..|+.
T Consensus 94 a---~~~~~d~~g~tpL~~A~~~~~~ 116 (239)
T 1ycs_B 94 V---NVNAADSDGWTPLHCAASCNNV 116 (239)
T ss_dssp C---CTTCCCTTCCCHHHHHHHTTCH
T ss_pred C---CCCccCCCCCCHHHHHHHcCCH
Confidence 5 3666699999999999999984
No 88
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.53 E-value=2.9e-14 Score=135.35 Aligned_cols=101 Identities=11% Similarity=-0.036 Sum_probs=86.3
Q ss_pred HHHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 21 VEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.++++.|++.. +.+....+.+|.||||+|+..|+.++++.|++.+.+. +.+|.+|+||||+|+..|+.+++++|++.+
T Consensus 213 ~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~~LL~~G 291 (368)
T 3jue_A 213 LPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHATILGHTGLACLFLKRG 291 (368)
T ss_dssp HHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCcHHHHHHHHHCc
Confidence 46778888776 5554422388999999999999999999999987764 568999999999999999999999999998
Q ss_pred CccccccccccCCCchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ .++.+|.+|+||||+|+..++.
T Consensus 292 a---d~~~~d~~G~TpL~~A~~~g~~ 314 (368)
T 3jue_A 292 A---DLGARDSEGRDPLTIAMETANA 314 (368)
T ss_dssp C---CTTCCCTTSCCHHHHHHHTTCH
T ss_pred C---CCCCcCCCCCCHHHHHHHCCCH
Confidence 6 3566699999999999999984
No 89
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.53 E-value=5.2e-15 Score=122.62 Aligned_cols=110 Identities=13% Similarity=-0.021 Sum_probs=86.6
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCc-hHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNN-ILH 117 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnT-pLH 117 (339)
++.|.||||+|++.|+.++++.|++.+++ .+.+|..|+||||+|+ +|+.+++++|++.+. .++.+|.+|+| |||
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~---~~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGA---EPNCADPATLTRPVH 83 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTC---CCCCCCTTTCCCHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCC---CCCCcCCCCCcHHHH
Confidence 78899999999999999999999998766 4568999999999985 999999999999975 35666999999 999
Q ss_pred HhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 118 FGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 118 lA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
+|+..|+.+ .++.++. ....+..+ +|.||++++...
T Consensus 84 ~A~~~~~~~-----------------~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 121 (156)
T 1bi7_B 84 DAAREGFLD-----------------TLVVLHRAGARLDVRDAWGRLPVDLAEEL 121 (156)
T ss_dssp HHHHHTCHH-----------------HHHHHHHHTCCSSCCCTTCCCHHHHHHHH
T ss_pred HHHHCCCHH-----------------HHHHHHHcCCCCcccCCCCCCHHHHHHHh
Confidence 999999842 1221111 11234556 899999887553
No 90
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.53 E-value=2.7e-14 Score=130.31 Aligned_cols=97 Identities=11% Similarity=-0.009 Sum_probs=45.7
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFK 101 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~ 101 (339)
++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+.+. +.+|.+|+||||+|+..|+.+++++|++.+.+
T Consensus 73 ~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 150 (285)
T 3d9h_A 73 LSLRNLISQG-WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGAS 150 (285)
T ss_dssp HHHHHHHHTT-CCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHCC-CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCC
Confidence 3444444442 222222445555555555555555555555544332 33455555555555555555555555554421
Q ss_pred cccccccccCCCchHHHhhhcCC
Q 047454 102 SNWLGSNDNIRNNILHFGGKLVP 124 (339)
Q Consensus 102 ~~~~~~~D~~GnTpLHlA~~~~~ 124 (339)
.+.+.+|+||||+|+..|+
T Consensus 151 ----~~~~~~g~t~L~~A~~~g~ 169 (285)
T 3d9h_A 151 ----VQPESDLASPIHEAARRGH 169 (285)
T ss_dssp ----SSCSCTTSCHHHHHHHHTC
T ss_pred ----CCCCCCCCCHHHHHHHcCC
Confidence 1123335555555555554
No 91
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.52 E-value=4.9e-14 Score=123.55 Aligned_cols=101 Identities=12% Similarity=-0.028 Sum_probs=86.4
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|.||||+|++.|+.++++.|++.+++.....+..|+||||+|+..|+.+++++|++.+.
T Consensus 22 ~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~ 100 (240)
T 3eu9_A 22 YERCRELVEAG-YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGA 100 (240)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred hHHHHHHHHcC-CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCC
Confidence 47788888875 33444488999999999999999999999999988777667779999999999999999999999875
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.++.+|.+|.||||+|+..++.
T Consensus 101 ---~~~~~~~~g~t~l~~A~~~~~~ 122 (240)
T 3eu9_A 101 ---DPSLIDGEGCSCIHLAAQFGHT 122 (240)
T ss_dssp ---CTTCCCTTSCCHHHHHHHTTCH
T ss_pred ---CCcccCCCCCCHHHHHHHcCHH
Confidence 3455589999999999999884
No 92
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.52 E-value=3.8e-14 Score=127.32 Aligned_cols=130 Identities=13% Similarity=0.059 Sum_probs=100.8
Q ss_pred HHHHHHHHhcc-CCCCcc--------ccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCC---
Q 047454 21 VEIVRIICKGV-IWNDPQ--------NQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRR--- 88 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~--------~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~--- 88 (339)
.++++.|++.. +.+... .+.+|.||||+|++.|+.++++.|++..+...+..|..|+||||+|+..++
T Consensus 118 ~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 197 (285)
T 1wdy_A 118 VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSD 197 (285)
T ss_dssp HHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTT
T ss_pred HHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccch
Confidence 46777888776 443321 167799999999999999999999998555567789999999999999999
Q ss_pred -hHHHHHHHcccCccccccccccCCCchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc--hhHHHhhc-CCCCcc
Q 047454 89 -AEVFNLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH--PFLREAVN-NEQTPR 164 (339)
Q Consensus 89 -~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~--~~~~~~~n-~g~tp~ 164 (339)
.+++++|++.+. .++.+|.+|+||||+|+..++.+ .++.++. ....+..| +|.||+
T Consensus 198 ~~~i~~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~-----------------~v~~Ll~~~g~~~~~~~~~g~t~l 257 (285)
T 1wdy_A 198 VEAITHLLLDHGA---DVNVRGERGKTPLILAVEKKHLG-----------------LVQRLLEQEHIEINDTDSDGKTAL 257 (285)
T ss_dssp HHHHHHHHHHTTC---CSSCCCTTSCCHHHHHHHTTCHH-----------------HHHHHHHSSSCCTTCCCTTSCCHH
T ss_pred HHHHHHHHHHcCC---CCCCcCCCCCcHHHHHHHcCCHH-----------------HHHHHHhccCCCccccCCCCCcHH
Confidence 899999999985 35556999999999999999841 2222221 22245567 999999
Q ss_pred hhchHH
Q 047454 165 EVFTEE 170 (339)
Q Consensus 165 dl~~~~ 170 (339)
+++.+.
T Consensus 258 ~~A~~~ 263 (285)
T 1wdy_A 258 LLAVEL 263 (285)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 987654
No 93
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.52 E-value=1.1e-14 Score=125.13 Aligned_cols=100 Identities=13% Similarity=0.031 Sum_probs=83.9
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCc------HHHHHHHHHHCCCCcccccCCCc-hHhhHHHHcCC-----
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGI------SKFVQEIIAAYKGSVYWEDENKH-TIFHVAVLHRR----- 88 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~------~~iv~~Ll~~~p~~~~~~d~~G~-t~LH~A~~~~~----- 88 (339)
.++++.|++.+ .|++..|.+|+||||+|+..|+ .++++.|++.+.+. +.+|.+|+ ||||+|+..+.
T Consensus 55 ~~iv~~Ll~~G-advn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~ 132 (186)
T 3t8k_A 55 YKISMFLINKG-ADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEM 132 (186)
T ss_dssp HHHHHHHHHTT-CCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHH
T ss_pred HHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhH
Confidence 47899999885 4444448999999999999997 68899999988764 66899999 99999999553
Q ss_pred hHHHHHHHc-ccCccccccccccCCCchHHHhhhcCCC
Q 047454 89 AEVFNLIYS-STFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 89 ~~iv~~Ll~-~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
.+++++|++ .|+ .++.+|.+|+||||+|++.++.
T Consensus 133 ~~iv~~Ll~~~ga---d~~~~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 133 IPLYKLIFSQSGL---QLLIKDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp HHHHHHHHTSTTC---CTTCCCTTSCCHHHHHHTTTCH
T ss_pred HHHHHHHHHhcCC---CCcccCCCCCCHHHHHHHcCCH
Confidence 469999999 775 3666799999999999999984
No 94
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.51 E-value=3.9e-14 Score=129.36 Aligned_cols=97 Identities=16% Similarity=0.047 Sum_probs=80.2
Q ss_pred HHHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 21 VEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.++++.|++.. +.+.. +|+||||+|+..|+.++++.|++.+++. +.+|..|+||||+|+..|+.+++++|++.+
T Consensus 44 ~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 118 (285)
T 3kea_A 44 VRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKN 118 (285)
T ss_dssp HHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcC
Confidence 37788888875 43332 5899999999999999999999987764 558889999999999999999999999987
Q ss_pred CccccccccccCC-CchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIR-NNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~G-nTpLHlA~~~~~~ 125 (339)
+ .++.+|.+| +||||+|+..|+.
T Consensus 119 a---~~~~~~~~g~~t~L~~A~~~~~~ 142 (285)
T 3kea_A 119 W---RLMFYGKTGWKTSFYHAVMLNDV 142 (285)
T ss_dssp G---GGGGCSSSGGGSHHHHHHHTTCH
T ss_pred C---CCCccCCCCCCCHHHHHHHcCCH
Confidence 5 355568888 8999999998875
No 95
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.50 E-value=4.9e-14 Score=133.58 Aligned_cols=103 Identities=13% Similarity=0.060 Sum_probs=89.6
Q ss_pred HHHHHHHHHhcc-CCCCc------cccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHH
Q 047454 20 AVEIVRIICKGV-IWNDP------QNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVF 92 (339)
Q Consensus 20 a~~iv~~L~~~~-~~~~~------~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv 92 (339)
..++++.|++.. +.+.. ..|.+|+||||+|++.|+.++++.|++.++..++.+|.+|+||||+|+.+|+.+++
T Consensus 250 ~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv 329 (373)
T 2fo1_E 250 QVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVV 329 (373)
T ss_dssp HHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred hHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHH
Confidence 568888898887 55431 23678999999999999999999999988666778999999999999999999999
Q ss_pred HHHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 93 NLIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 93 ~~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
++|++.|+ .++.+|.+|+||||+|+..|+.
T Consensus 330 ~~Ll~~ga---d~~~~d~~g~t~l~~A~~~g~~ 359 (373)
T 2fo1_E 330 MYLIQQGA---SVEAVDATDHTARQLAQANNHH 359 (373)
T ss_dssp HHHHHTTC---CSSCCCSSSCCHHHHHHHTTCH
T ss_pred HHHHHcCC---CccCCCCCCCCHHHHHHHcCCH
Confidence 99999986 3566699999999999999984
No 96
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.50 E-value=3.9e-14 Score=127.87 Aligned_cols=102 Identities=12% Similarity=0.017 Sum_probs=82.9
Q ss_pred HHHHHHHHhcc-CCCCccccc--------------cCCcHHHHHHHCCcHHHHHHHHH---HCCCCcccccCCCchHhhH
Q 047454 21 VEIVRIICKGV-IWNDPQNQQ--------------LLKKAFFKAATLGISKFVQEIIA---AYKGSVYWEDENKHTIFHV 82 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~d~--------------~g~tpLh~Aa~~G~~~iv~~Ll~---~~p~~~~~~d~~G~t~LH~ 82 (339)
.++++.|++.. +.+.. +. +|+||||+|++.|+.++++.|++ .+.+ ++.+|.+|+||||+
T Consensus 114 ~~~v~~Ll~~ga~~~~~--~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~ 190 (273)
T 2pnn_A 114 MTLVTLLVENGADVQAA--ANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD-ISARDSVGNTVLHA 190 (273)
T ss_dssp HHHHHHHHHTTCCTTCC--BCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHH
T ss_pred HHHHHHHHHCCCCcCcc--ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC-ceeeCCCCCcHHHH
Confidence 47888888885 44333 43 79999999999999999999999 5544 56689999999999
Q ss_pred HHHcCC---------hHHHHHHHcccCcccc----ccccccCCCchHHHhhhcCCC
Q 047454 83 AVLHRR---------AEVFNLIYSSTFKSNW----LGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 83 A~~~~~---------~~iv~~Ll~~~~~~~~----~~~~D~~GnTpLHlA~~~~~~ 125 (339)
|+..++ .+++++|++.+++... +..+|.+|+||||+|+..|+.
T Consensus 191 A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 191 LVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp HHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChH
Confidence 999998 7999999998753110 123599999999999999984
No 97
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.50 E-value=2.6e-14 Score=135.45 Aligned_cols=103 Identities=15% Similarity=0.144 Sum_probs=64.5
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCC--CCcccccCCCchHhhHHHHcC---ChHHHHHHH
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYK--GSVYWEDENKHTIFHVAVLHR---RAEVFNLIY 96 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p--~~~~~~d~~G~t~LH~A~~~~---~~~iv~~Ll 96 (339)
++++.|++.. .+.+..|.+|.||||+|+..|+.++++.|++.++ ...+..|.+|+||||+|+..+ +.+++++|+
T Consensus 180 ~iv~~Ll~~g-a~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll 258 (373)
T 2fo1_E 180 RLVAYLMKAG-ADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLV 258 (373)
T ss_dssp HHHHHHHHTT-CCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHH
T ss_pred HHHHHHHHCC-CCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHH
Confidence 5677777764 2223336677777777777777777777776541 123446677777777777776 667777777
Q ss_pred cccCcccc-----ccccccCCCchHHHhhhcCCC
Q 047454 97 SSTFKSNW-----LGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 97 ~~~~~~~~-----~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+.+.+... ...+|.+|+||||+|+..|+.
T Consensus 259 ~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 292 (373)
T 2fo1_E 259 EKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNM 292 (373)
T ss_dssp HHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCH
T ss_pred HCCCCcccccccccCcccccCCCHHHHHHHhCCH
Confidence 76643211 111366777777777776664
No 98
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.50 E-value=1.8e-14 Score=131.64 Aligned_cols=97 Identities=10% Similarity=0.031 Sum_probs=79.0
Q ss_pred HHHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 20 AVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 20 a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
+.++.+.|.+. +.+..|.+|+||||+|++.|+.++++.|++.+++... . +|+||||+|+..|+.+++++|++.+
T Consensus 12 ~~~v~~lL~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~--~g~t~L~~A~~~g~~~~v~~Ll~~g 85 (285)
T 3kea_A 12 SKQLKSFLSSK---DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNL-L--ENEFPLHQAATLEDTKIVKILLFSG 85 (285)
T ss_dssp HHHHHHHHHST---TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSC-C--TTCCHHHHHTTSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHhC---CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-C--CCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 34555555444 3444589999999999999999999999998765322 3 5999999999999999999999998
Q ss_pred CccccccccccCCCchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
++ ++.+|.+|+||||+|+..|+.
T Consensus 86 a~---~~~~d~~g~t~L~~A~~~g~~ 108 (285)
T 3kea_A 86 LD---DSQFDDKGNTALYYAVDSGNM 108 (285)
T ss_dssp CC---TTCCCTTSCCHHHHHHHTTCH
T ss_pred CC---CCCcCCCCCcHHHHHHHcCCH
Confidence 63 555699999999999999984
No 99
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.49 E-value=5.2e-14 Score=128.22 Aligned_cols=84 Identities=13% Similarity=0.081 Sum_probs=75.7
Q ss_pred cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHHH
Q 047454 39 QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILHF 118 (339)
Q Consensus 39 d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLHl 118 (339)
+.+|.||||.|+..|+.++++.|++.+++. +..|.+|+||||+|+..|+.+++++|++.++ .++.+|.+|+||||+
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga---~~~~~~~~g~tpL~~ 112 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADI-NYANVDGLTALHQACIDDNVDMVKFLVENGA---NINQPDNEGWIPLHA 112 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHCCC---CCCCCCCCCCcHHHH
Confidence 678899999999999999999999998774 5689999999999999999999999999985 355669999999999
Q ss_pred hhhcCCCC
Q 047454 119 GGKLVPSS 126 (339)
Q Consensus 119 A~~~~~~~ 126 (339)
|+..|+.+
T Consensus 113 A~~~g~~~ 120 (299)
T 1s70_B 113 AASCGYLD 120 (299)
T ss_dssp HHHHTCHH
T ss_pred HHHcCCHH
Confidence 99999863
No 100
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.49 E-value=7.2e-14 Score=134.49 Aligned_cols=100 Identities=11% Similarity=0.105 Sum_probs=84.7
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|.||||+|++.|+.++++.|++.+++. +.+|.+|+||||+|+..|+.+++++|++.++
T Consensus 27 ~~~v~~Ll~~g-~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 104 (437)
T 1n11_A 27 LPIVKNLLQRG-ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAARIGHTNMVKLLLENNA 104 (437)
T ss_dssp HHHHHHHHHTT-CCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhCCC
Confidence 47888888875 333334888999999999999999999999987764 5588999999999999999999999999875
Q ss_pred ccccccccccCCCchHHHhhhcCCC
Q 047454 101 KSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 101 ~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ ++..|.+|.||||+|+..|+.
T Consensus 105 ~---~~~~~~~g~t~L~~A~~~g~~ 126 (437)
T 1n11_A 105 N---PNLATTAGHTPLHIAAREGHV 126 (437)
T ss_dssp C---TTCCCTTCCCHHHHHHHHTCH
T ss_pred C---CCCCCCCCCcHHHHHHHcCCH
Confidence 3 455689999999999999985
No 101
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.48 E-value=8e-14 Score=137.33 Aligned_cols=100 Identities=15% Similarity=0.088 Sum_probs=85.2
Q ss_pred HHHHHHHhcc-CCCCc----cccccCCcHHHHHHH---CCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHH
Q 047454 22 EIVRIICKGV-IWNDP----QNQQLLKKAFFKAAT---LGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFN 93 (339)
Q Consensus 22 ~iv~~L~~~~-~~~~~----~~d~~g~tpLh~Aa~---~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~ 93 (339)
+.++.|++.. +.+.. ..|.+|+||||+|++ .|+.++++.|++.+.+. +.+|.+|+||||+|+.+|+.++++
T Consensus 146 ~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh~A~~~g~~~~v~ 224 (497)
T 3lvq_E 146 LSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLK 224 (497)
T ss_dssp HHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHHHHHTTTTCHHHHH
T ss_pred HHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHH
Confidence 5677777776 44332 227889999999966 99999999999998764 668999999999999999999999
Q ss_pred HHHcccCccccccccccCCCchHHHhhhcCCC
Q 047454 94 LIYSSTFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 94 ~Ll~~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+|++.|++ ++.+|.+|+||||+|+..|+.
T Consensus 225 ~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~ 253 (497)
T 3lvq_E 225 LLLKGRAL---VGTVNEAGETALDIARKKHHK 253 (497)
T ss_dssp HHHHTCCC---CSCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHcCCC---CCCcCCCCCCHHHHHHHcCCH
Confidence 99999863 666799999999999999985
No 102
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.48 E-value=1.2e-13 Score=128.56 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=79.9
Q ss_pred HHHHHHHHhccCCCCcccc-ccCCcHHHHHHHCCcHHHHHHHHHHCCCC-------------------------------
Q 047454 21 VEIVRIICKGVIWNDPQNQ-QLLKKAFFKAATLGISKFVQEIIAAYKGS------------------------------- 68 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d-~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~------------------------------- 68 (339)
.++|+.|++.+ .|++..| ..|+||||+|++.|+.++++.|++.+.+.
T Consensus 38 ~~~V~~LL~~G-advn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (337)
T 4g8k_A 38 VDLVQQLLEGG-ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGA 116 (337)
T ss_dssp HHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHHHHHHCC-CCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccc
Confidence 36888888885 3333334 45999999999999999999999876542
Q ss_pred -cccccCCCchHhhHHHHcCChHHHHHHHcccCcccc-------ccccccCCCchHHHhhhcCCC
Q 047454 69 -VYWEDENKHTIFHVAVLHRRAEVFNLIYSSTFKSNW-------LGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 69 -~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~-------~~~~D~~GnTpLHlA~~~~~~ 125 (339)
++.+|..|+||||+|+..|+.++++++++.+++... ....|..|.||||+|+..|+.
T Consensus 117 ~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~ 181 (337)
T 4g8k_A 117 DVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 181 (337)
T ss_dssp CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH
T ss_pred hhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCH
Confidence 345678899999999999999999999988753211 112267899999999999884
No 103
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.48 E-value=1.5e-13 Score=123.49 Aligned_cols=100 Identities=13% Similarity=0.066 Sum_probs=83.0
Q ss_pred HHHHHHHHhccCCCCccc-cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 21 VEIVRIICKGVIWNDPQN-QQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~-d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.++++.|++.. .+.+.. +..|+||||+|++.|+.++++.|++.+++. +..|.+|+||||+|+..|+.+++++|++.+
T Consensus 18 ~~~v~~Ll~~g-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 95 (285)
T 1wdy_A 18 VDLVQQLLEGG-ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIAGSVKLLKLFLSKG 95 (285)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHHcC-CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 46788888875 233333 677899999999999999999999987664 457889999999999999999999999987
Q ss_pred CccccccccccCCCchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
. .++.+|.+|.||||+|+..++.
T Consensus 96 ~---~~~~~~~~g~t~L~~A~~~~~~ 118 (285)
T 1wdy_A 96 A---DVNECDFYGFTAFMEAAVYGKV 118 (285)
T ss_dssp C---CTTCBCTTCCBHHHHHHHTTCH
T ss_pred C---CCCccCcccCCHHHHHHHhCCH
Confidence 5 3555689999999999999885
No 104
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.45 E-value=2.2e-13 Score=119.34 Aligned_cols=100 Identities=12% Similarity=0.077 Sum_probs=82.4
Q ss_pred HHHHHHHHhcc-CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 21 VEIVRIICKGV-IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
.++++.|++.. +.+.. .+..|.||||+|+..|+.++++.|++.+.+. +.+|..|+||||+|+..|+.+++++|++.+
T Consensus 55 ~~~v~~Ll~~~~~~~~~-~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~ 132 (240)
T 3eu9_A 55 IDLVKYYISKGAIVDQL-GGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAKG 132 (240)
T ss_dssp HHHHHHHHHTTCCTTCC-BTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCcchhh-cCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhcC
Confidence 47888888886 33221 2456899999999999999999999987664 557899999999999999999999999987
Q ss_pred CccccccccccCCCchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
. .++.+|.+|+||||+|+..++.
T Consensus 133 ~---~~~~~~~~g~t~l~~a~~~~~~ 155 (240)
T 3eu9_A 133 Q---DVDMMDQNGMTPLMWAAYRTHS 155 (240)
T ss_dssp C---CTTCCCTTSCCHHHHHHHHCCS
T ss_pred C---CccccCCCCCcHHHHHHHhCCh
Confidence 5 3555589999999999987774
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.44 E-value=4.5e-13 Score=100.99 Aligned_cols=78 Identities=19% Similarity=0.207 Sum_probs=67.8
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. +.+|.+|+||||+|+..|+.+++++|++.|+
T Consensus 15 ~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 15 LEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 47788888875 334444899999999999999999999999988774 5689999999999999999999999999874
No 106
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.43 E-value=3.6e-13 Score=125.25 Aligned_cols=101 Identities=11% Similarity=0.065 Sum_probs=49.6
Q ss_pred HHHHHHHhccCCCCccccccCCcHHHHHHHCCc----HHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHc
Q 047454 22 EIVRIICKGVIWNDPQNQQLLKKAFFKAATLGI----SKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYS 97 (339)
Q Consensus 22 ~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~----~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~ 97 (339)
++++.|+++.+.+++..|..|+||+|.++..++ .++++.|++.+.+. +.+|.+|+||||+|+..|+.++++.|++
T Consensus 182 ~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~~d~~g~t~L~~a~~~~~~~~v~~Ll~ 260 (337)
T 4g8k_A 182 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLE 260 (337)
T ss_dssp HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhhhhHHHHHHHH
Confidence 455555544333333335555555555443322 23445555544432 3355555555555555555555555554
Q ss_pred ccCccccccccccCCCchHHHhhhcCCC
Q 047454 98 STFKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 98 ~~~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
... ..++.+|.+|+||||+|+..|+.
T Consensus 261 ~~~--~~vn~~d~~G~TpL~~A~~~g~~ 286 (337)
T 4g8k_A 261 QEH--IEINDTDSDGKTALLLAVELKLK 286 (337)
T ss_dssp STT--CCTTCBCTTSCBHHHHHHHTTCH
T ss_pred hcC--CcccCcCCCCCCHHHHHHHcCCH
Confidence 321 12333455555555555555553
No 107
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.43 E-value=1.2e-13 Score=127.57 Aligned_cols=95 Identities=15% Similarity=0.017 Sum_probs=75.5
Q ss_pred HHHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHccc
Q 047454 20 AVEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSST 99 (339)
Q Consensus 20 a~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~ 99 (339)
..++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. +.+|.+|+||||+|+..++.+++++|++.+
T Consensus 205 ~~~iv~~Ll~~g-advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g 282 (301)
T 2b0o_E 205 SLPLVDFIIQNG-GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQ 282 (301)
T ss_dssp THHHHHHHHHHS-SCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred cHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 357889998885 334444899999999999999999999999987774 568999999999999999999999999987
Q ss_pred CccccccccccCCCchHHHhhhcCCC
Q 047454 100 FKSNWLGSNDNIRNNILHFGGKLVPS 125 (339)
Q Consensus 100 ~~~~~~~~~D~~GnTpLHlA~~~~~~ 125 (339)
+ ..|+||||+|+..|+.
T Consensus 283 a---------~~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 283 A---------GTFAFPLHVDYSWVIS 299 (301)
T ss_dssp H---------HTTSSCCC--------
T ss_pred C---------CCCCChhHHHHhcCCc
Confidence 3 2699999999999873
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.38 E-value=5.7e-13 Score=104.23 Aligned_cols=90 Identities=13% Similarity=0.049 Sum_probs=74.7
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHHHcccC
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLIYSSTF 100 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~Ll~~~~ 100 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+++. +.+|.+|+||||+|+..++.+++++|++.|+
T Consensus 22 ~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga 99 (115)
T 2l6b_A 22 AEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHLAKKNGHHEIVKLLDAKGA 99 (115)
T ss_dssp HHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHHHHTTTCHHHHHHHHTTSS
T ss_pred HHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 46788888775 334444899999999999999999999999987764 5689999999999999999999999999986
Q ss_pred ccccccccccCCCch
Q 047454 101 KSNWLGSNDNIRNNI 115 (339)
Q Consensus 101 ~~~~~~~~D~~GnTp 115 (339)
+ ++.+|.+|.||
T Consensus 100 ~---~n~~~~~~~~~ 111 (115)
T 2l6b_A 100 D---VNARSWGSSHH 111 (115)
T ss_dssp S---HHHHSCCCC--
T ss_pred C---CCcCCcccccc
Confidence 3 55568888887
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.32 E-value=2.4e-12 Score=117.34 Aligned_cols=110 Identities=14% Similarity=0.053 Sum_probs=87.7
Q ss_pred cCCcHHHHHHHCCcHHHHHHHHHHCCCCc-----ccccCCCchHhhHHHHc---CChHHHHHHHcccCccccccccccCC
Q 047454 41 LLKKAFFKAATLGISKFVQEIIAAYKGSV-----YWEDENKHTIFHVAVLH---RRAEVFNLIYSSTFKSNWLGSNDNIR 112 (339)
Q Consensus 41 ~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~-----~~~d~~G~t~LH~A~~~---~~~~iv~~Ll~~~~~~~~~~~~D~~G 112 (339)
...++||.|++.|+.+.++.+++.+++.. +..|..|+||||+|+.. ++.+++++|++.++ .++.+|.+|
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga---~in~~d~~g 205 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG---NLDKQTGKG 205 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCS---CTTCCCTTC
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCC---CccccCCCC
Confidence 44689999999999999999999988753 33488999999999999 89999999999986 366679999
Q ss_pred CchHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhc-chhHHHhhc-CCCCcchhchHH
Q 047454 113 NNILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLV-HPFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 113 nTpLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~-~~~~~~~~n-~g~tp~dl~~~~ 170 (339)
+||||+|+..|+.+ .++.++ .....+.+| +|.||++++.+.
T Consensus 206 ~TpLh~A~~~g~~~-----------------~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 248 (278)
T 1dcq_A 206 STALHYCCLTDNAE-----------------CLKLLLRGKASIEIANESGETPLDIAKRL 248 (278)
T ss_dssp CCHHHHHHHTTCHH-----------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHcCCHH-----------------HHHHHHHcCCCCCCccCCCCCHHHHHHHc
Confidence 99999999999842 222222 112345667 999999997654
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.31 E-value=5.5e-13 Score=126.88 Aligned_cols=100 Identities=13% Similarity=0.023 Sum_probs=76.5
Q ss_pred HHHHHHHhcc--CCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCc--ccccCCCchHhhHHHHcCChHHHHHHHc
Q 047454 22 EIVRIICKGV--IWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSV--YWEDENKHTIFHVAVLHRRAEVFNLIYS 97 (339)
Q Consensus 22 ~iv~~L~~~~--~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~--~~~d~~G~t~LH~A~~~~~~~iv~~Ll~ 97 (339)
++++.|++.. ....+..+.+|.||||+||++|+.+++++|++.+++.. +..+.+ +||||+|+.+|+.+++++|++
T Consensus 106 e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~ 184 (376)
T 2aja_A 106 SALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCE 184 (376)
T ss_dssp HHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHH
Confidence 6788888775 11222336678899999999999999999999887521 212222 999999999999999999999
Q ss_pred ccCccccccc--cccCCCchHHHhh-hcCCC
Q 047454 98 STFKSNWLGS--NDNIRNNILHFGG-KLVPS 125 (339)
Q Consensus 98 ~~~~~~~~~~--~D~~GnTpLHlA~-~~~~~ 125 (339)
.+++ ++. .|.+|+||||+|+ ..|+.
T Consensus 185 ~ga~---~~~~~~d~~g~TpL~~Aa~~~G~~ 212 (376)
T 2aja_A 185 LAPT---EATAMIQAENYYAFRWAAVGRGHH 212 (376)
T ss_dssp SCGG---GHHHHHHHHHHHHHHHHHSTTCCH
T ss_pred cCCc---cchhccCCCCCCHHHHHHHHCCCH
Confidence 9753 344 5888999999999 99985
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.30 E-value=2.5e-12 Score=121.98 Aligned_cols=109 Identities=12% Similarity=0.071 Sum_probs=86.6
Q ss_pred cCCcHHHHHHHC-CcHHHHHHHHHHCCCCccccc--CCCchHhhHHHHcCChHHHHHHHcccCccccccccccCCCchHH
Q 047454 41 LLKKAFFKAATL-GISKFVQEIIAAYKGSVYWED--ENKHTIFHVAVLHRRAEVFNLIYSSTFKSNWLGSNDNIRNNILH 117 (339)
Q Consensus 41 ~g~tpLh~Aa~~-G~~~iv~~Ll~~~p~~~~~~d--~~G~t~LH~A~~~~~~~iv~~Ll~~~~~~~~~~~~D~~GnTpLH 117 (339)
.+.||||.|+.. |+.++++.|++.+.+. +..| .+|+||||+|+..|+.+++++|++.++ .++.+|.+|+||||
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Ga---dvn~~d~~G~TpLh 273 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGA---NVNQADSAGRGPLH 273 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCC---CCCCCCCCCCCHHH
Confidence 456899999999 9999999999988775 4466 899999999999999999999999986 36666999999999
Q ss_pred HhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchHH
Q 047454 118 FGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTEE 170 (339)
Q Consensus 118 lA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~~ 170 (339)
+|+..++.+ .++.++. ....+..| +|.||++++.+.
T Consensus 274 ~A~~~g~~~-----------------~v~~LL~~Gad~~~~d~~G~TpL~~A~~~ 311 (368)
T 3jue_A 274 HATILGHTG-----------------LACLFLKRGADLGARDSEGRDPLTIAMET 311 (368)
T ss_dssp HHHHHTCHH-----------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHcCcHH-----------------HHHHHHHCcCCCCCcCCCCCCHHHHHHHC
Confidence 999999842 1222111 12245567 899999987653
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.24 E-value=8.3e-12 Score=122.90 Aligned_cols=107 Identities=16% Similarity=0.123 Sum_probs=83.1
Q ss_pred CcHHHHHHHCCcHHHHHHHHHHCCCCccc-----ccCCCchHhhHHHH---cCChHHHHHHHcccCccccccccccCCCc
Q 047454 43 KKAFFKAATLGISKFVQEIIAAYKGSVYW-----EDENKHTIFHVAVL---HRRAEVFNLIYSSTFKSNWLGSNDNIRNN 114 (339)
Q Consensus 43 ~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~-----~d~~G~t~LH~A~~---~~~~~iv~~Ll~~~~~~~~~~~~D~~GnT 114 (339)
.+.||.|+..|+.+.++.|++.+++.... .|..|+||||+|+. .|+.+++++|++.|+ .++.+|.+|+|
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga---~vn~~d~~g~T 209 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG---HLDAKAADGNT 209 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSC---CTTCCCSSSCC
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCC---CCCccCCCCCc
Confidence 37899999999999999999998775321 27899999999976 899999999999986 46667999999
Q ss_pred hHHHhhhcCCCCCcchhhhhhhHhhhHHHHHHhhcc-hhHHHhhc-CCCCcchhchH
Q 047454 115 ILHFGGKLVPSSEVAGAALQMQRKLEWFKAVENLVH-PFLREAVN-NEQTPREVFTE 169 (339)
Q Consensus 115 pLHlA~~~~~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n-~g~tp~dl~~~ 169 (339)
|||+|+..|+.+ .++.++. ....+..| +|.||++++..
T Consensus 210 pLh~A~~~g~~~-----------------~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 249 (497)
T 3lvq_E 210 ALHYAALYNQPD-----------------CLKLLLKGRALVGTVNEAGETALDIARK 249 (497)
T ss_dssp HHHHHTTTTCHH-----------------HHHHHHHTCCCCSCCCTTCCCHHHHHHH
T ss_pred HHHHHHHcCCHH-----------------HHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 999999999842 1222111 12234556 88888887654
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.19 E-value=6.8e-11 Score=91.95 Aligned_cols=73 Identities=16% Similarity=0.167 Sum_probs=62.6
Q ss_pred HHHHHHHHhccCCCCccccccCCcHHHHHHHCCcHHHHHHHHHHCCCCcccccCCCchHhhHHHHcCChHHHHHH
Q 047454 21 VEIVRIICKGVIWNDPQNQQLLKKAFFKAATLGISKFVQEIIAAYKGSVYWEDENKHTIFHVAVLHRRAEVFNLI 95 (339)
Q Consensus 21 ~~iv~~L~~~~~~~~~~~d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~~~d~~G~t~LH~A~~~~~~~iv~~L 95 (339)
.++++.|++.. .+.+..|.+|+||||+|+..|+.++++.|++.+.+ .+.+|..|+||||+|+..|+.+++++|
T Consensus 37 ~~~v~~Ll~~g-~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 37 DDEVRILMANG-ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 36778888775 34444488999999999999999999999998766 456899999999999999999999986
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.15 E-value=3.4e-12 Score=121.39 Aligned_cols=95 Identities=11% Similarity=-0.000 Sum_probs=76.7
Q ss_pred HHHHHHHHhcc-CCCCccc-cccCCcHHHHHHHCCcHHHHHHHHHHCCCCcc-cccCCCchHhhHHH-HcCChHHHHHHH
Q 047454 21 VEIVRIICKGV-IWNDPQN-QQLLKKAFFKAATLGISKFVQEIIAAYKGSVY-WEDENKHTIFHVAV-LHRRAEVFNLIY 96 (339)
Q Consensus 21 ~~iv~~L~~~~-~~~~~~~-d~~g~tpLh~Aa~~G~~~iv~~Ll~~~p~~~~-~~d~~G~t~LH~A~-~~~~~~iv~~Ll 96 (339)
.++++.|++.. +.+.... +.+ +||||+||++|+.++++.|++.+++... ..|.+|+||||+|+ .+|+.+++++|+
T Consensus 141 ~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll 219 (376)
T 2aja_A 141 LHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLL 219 (376)
T ss_dssp HHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHT
T ss_pred HHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHH
Confidence 37788888875 3211122 233 8999999999999999999999876432 27888999999999 999999999999
Q ss_pred cccCccccccccccCCCchHHHhhhcCCCC
Q 047454 97 SSTFKSNWLGSNDNIRNNILHFGGKLVPSS 126 (339)
Q Consensus 97 ~~~~~~~~~~~~D~~GnTpLHlA~~~~~~~ 126 (339)
+.++ +|+||||.|+..|+.+
T Consensus 220 ~~ga----------~~~taL~~Aa~~g~~e 239 (376)
T 2aja_A 220 DCPV----------MLAYAEIHEFEYGEKY 239 (376)
T ss_dssp TSHH----------HHHHHHHCTTTTTTTT
T ss_pred hCCC----------ccchHHHHHHHCCCHH
Confidence 9752 3899999999999964
No 115
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=27.08 E-value=31 Score=31.60 Aligned_cols=21 Identities=24% Similarity=0.289 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHh
Q 047454 272 ITMFFSIASMMVSFGATIYLV 292 (339)
Q Consensus 272 ~~~~~s~~~m~~af~~~~~~v 292 (339)
.+..++.+.|..+|.||+|-+
T Consensus 305 ~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 305 VLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 456688889999999999843
No 116
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=24.77 E-value=27 Score=31.63 Aligned_cols=21 Identities=14% Similarity=0.104 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHh
Q 047454 272 ITMFFSIASMMVSFGATIYLV 292 (339)
Q Consensus 272 ~~~~~s~~~m~~af~~~~~~v 292 (339)
.+..+|++.+..+|.+|+|-+
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 456688889999999999954
No 117
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=20.70 E-value=70 Score=19.14 Aligned_cols=17 Identities=18% Similarity=0.081 Sum_probs=13.7
Q ss_pred HHHHHHCCcHHHHHHHH
Q 047454 46 FFKAATLGISKFVQEII 62 (339)
Q Consensus 46 Lh~Aa~~G~~~iv~~Ll 62 (339)
+..||+.|+.+.++.|=
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 46789999999888764
Done!