BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047456
(71 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224069912|ref|XP_002303084.1| predicted protein [Populus trichocarpa]
gi|118487570|gb|ABK95611.1| unknown [Populus trichocarpa]
gi|222844810|gb|EEE82357.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%)
Query: 5 ATSTNFMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
A +F KPQL VEA KA +VQFY+ AFGAVE R + KRKA+QEL
Sbjct: 15 AVEVSFKSFKPQLFVEAPKANDAVQFYKTAFGAVETCRTTQPKRKADQEL 64
>gi|225470242|ref|XP_002263284.1| PREDICTED: uncharacterized protein At5g48480 [Vitis vinifera]
Length = 161
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 33/41 (80%)
Query: 14 KPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
KPQL VEA KAT +VQFY+ AFGA E++R M KRKA+QEL
Sbjct: 22 KPQLFVEAPKATDAVQFYKAAFGAEEVNRTMHPKRKADQEL 62
>gi|351723033|ref|NP_001235473.1| uncharacterized protein LOC100306467 [Glycine max]
gi|255628635|gb|ACU14662.1| unknown [Glycine max]
Length = 165
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 3 APATSTNFMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
A A + +F+ +KPQLLVEA KA ++ F++ AFGA E+ R + KRKAE EL
Sbjct: 15 AAAATVSFVAVKPQLLVEAPKANDAILFFKAAFGAEEVGRTLNPKRKAEHEL 66
>gi|255572644|ref|XP_002527255.1| conserved hypothetical protein [Ricinus communis]
gi|223533348|gb|EEF35099.1| conserved hypothetical protein [Ricinus communis]
Length = 165
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 15 PQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
PQLLVEA +A +VQFY++AFGAVE R + KRKAEQEL
Sbjct: 25 PQLLVEAPRANEAVQFYKVAFGAVETGRTTQPKRKAEQEL 64
>gi|356567730|ref|XP_003552070.1| PREDICTED: uncharacterized protein At5g48480-like [Glycine max]
Length = 163
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 5 ATSTNFMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
A + +F+ +KPQLL+EA KA +V FY+ AF A E+ R + KRKAE EL
Sbjct: 15 AAAVSFVALKPQLLIEAPKANDAVLFYKAAFAAEEVGRTLNPKRKAEHEL 64
>gi|449511236|ref|XP_004163901.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At5g48480-like [Cucumis sativus]
Length = 159
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 9 NFMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQE 53
+F KPQLL++A KAT +V FY+ AF A E++R + +KRKAEQE
Sbjct: 15 SFKAFKPQLLLQAPKATDAVDFYKAAFAAEELNRTLHSKRKAEQE 59
>gi|449437180|ref|XP_004136370.1| PREDICTED: uncharacterized protein At5g48480-like [Cucumis
sativus]
Length = 159
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 9 NFMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQE 53
+F KPQLL++A KAT +V FY+ AF A E++R + +KRKAEQE
Sbjct: 15 SFKAFKPQLLLQAPKATDAVDFYKAAFAAEELNRTLHSKRKAEQE 59
>gi|357505041|ref|XP_003622809.1| Early tobacco anther [Medicago truncatula]
gi|355497824|gb|AES79027.1| Early tobacco anther [Medicago truncatula]
gi|388501826|gb|AFK38979.1| unknown [Medicago truncatula]
Length = 165
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 8 TNFMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
+F+ KPQL VEA KA +V FY+ AF A E+SR++ KRKA+QEL
Sbjct: 19 VSFVAFKPQLFVEAPKANDAVVFYKNAFAAEEVSRSLNAKRKADQEL 65
>gi|388490626|gb|AFK33379.1| unknown [Medicago truncatula]
Length = 165
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 8 TNFMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
+F+ KPQL VEA KA +V FY+ AF A E+SR++ KRKA+QEL
Sbjct: 19 VSFVAFKPQLFVEAPKANDAVVFYKNAFAAEEVSRSLNAKRKADQEL 65
>gi|388492568|gb|AFK34350.1| unknown [Lotus japonicus]
Length = 167
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 14 KPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
KPQLLVEA KA +V FY+ AFGA E+SR + KRKA+ EL
Sbjct: 27 KPQLLVEAPKANDAVLFYKAAFGAEEVSRALNPKRKADHEL 67
>gi|28565534|gb|AAO43000.1| early tobacco anther 1 [Nicotiana tabacum]
Length = 166
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 7 STNFMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
+ F +KPQL VEA KA + QFY+ AFG E++R + KRKAEQE+
Sbjct: 23 AVTFTAVKPQLFVEAPKAKDAAQFYKAAFGVEEVTR-VNQKRKAEQEI 69
>gi|116788264|gb|ABK24812.1| unknown [Picea sitchensis]
Length = 123
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 3 APATSTNFMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
A A F +KP L+VEA A ++ FY+ FGA EI+++ KRKA+QEL
Sbjct: 18 AAAKLPTFSTLKPHLIVEAPHAADAISFYKRVFGAEEIAKSHHPKRKADQEL 69
>gi|116783006|gb|ABK22759.1| unknown [Picea sitchensis]
gi|148907160|gb|ABR16723.1| unknown [Picea sitchensis]
gi|224285631|gb|ACN40534.1| unknown [Picea sitchensis]
gi|224286677|gb|ACN41042.1| unknown [Picea sitchensis]
Length = 173
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 10 FMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
F +KP L+VEA A ++ FY+ FGA EI+++ KRKA+QEL
Sbjct: 25 FSTLKPHLIVEAPHAADAISFYKRVFGAEEIAKSHHPKRKADQEL 69
>gi|56967304|pdb|1XY7|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis
Thaliana At5g48480
gi|56967305|pdb|1XY7|B Chain B, X-Ray Structure Of Gene Product From Arabidopsis
Thaliana At5g48480
gi|150261479|pdb|2Q48|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Gene Product From Arabidopsis Thaliana At5g48480
gi|150261480|pdb|2Q48|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Gene Product From Arabidopsis Thaliana At5g48480
Length = 166
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 10 FMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQELNSRLPKDCN 63
F K LLVEA K +V FY+ AFGA+E ++ KRK +QEL L + N
Sbjct: 23 FTEFKQXLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELN 76
>gi|18422918|ref|NP_568698.1| Lactoylglutathione lyase / glyoxalase I-like protein [Arabidopsis
thaliana]
gi|73921149|sp|Q9LV66.1|Y5848_ARATH RecName: Full=Uncharacterized protein At5g48480
gi|8777378|dbj|BAA96968.1| unnamed protein product [Arabidopsis thaliana]
gi|18389224|gb|AAL67055.1| unknown protein [Arabidopsis thaliana]
gi|21592710|gb|AAM64659.1| unknown [Arabidopsis thaliana]
gi|22136970|gb|AAM91714.1| unknown protein [Arabidopsis thaliana]
gi|332008292|gb|AED95675.1| Lactoylglutathione lyase / glyoxalase I-like protein [Arabidopsis
thaliana]
Length = 166
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 10 FMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQELNSRLPKDCN 63
F K LLVEA K +V FY+ AFGA+E ++ KRK +QEL L + N
Sbjct: 23 FTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELN 76
>gi|302783382|ref|XP_002973464.1| hypothetical protein SELMODRAFT_17835 [Selaginella
moellendorffii]
gi|300159217|gb|EFJ25838.1| hypothetical protein SELMODRAFT_17835 [Selaginella
moellendorffii]
Length = 125
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 15 PQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
P L V+A A+ +++FY+ AFGA E++++ KRKA+Q++
Sbjct: 1 PHLFVQAPHASDAIEFYKKAFGAEEVAKSHHPKRKADQDV 40
>gi|302810002|ref|XP_002986693.1| hypothetical protein SELMODRAFT_17829 [Selaginella
moellendorffii]
gi|300145581|gb|EFJ12256.1| hypothetical protein SELMODRAFT_17829 [Selaginella
moellendorffii]
Length = 125
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 15 PQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQEL 54
P L V+A A+ +++FY+ AFGA E++++ KRKA+Q++
Sbjct: 1 PHLFVKAPHASDAIEFYKKAFGAEEVAKSHHPKRKADQDV 40
>gi|297792027|ref|XP_002863898.1| hypothetical protein ARALYDRAFT_917748 [Arabidopsis lyrata subsp.
lyrata]
gi|297309733|gb|EFH40157.1| hypothetical protein ARALYDRAFT_917748 [Arabidopsis lyrata subsp.
lyrata]
Length = 169
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 10 FMGMKPQLLVEASKATGSVQFYEIAFGAVEISRNMETKRKAEQELNSRLPKDCN 63
F +K L+VEA K +V FY+ AFGA+E ++ KRK +QEL L + N
Sbjct: 23 FTEIKQMLIVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLCSELN 76
>gi|427409152|ref|ZP_18899354.1| hypothetical protein HMPREF9718_01828 [Sphingobium yanoikuyae
ATCC 51230]
gi|425711285|gb|EKU74300.1| hypothetical protein HMPREF9718_01828 [Sphingobium yanoikuyae
ATCC 51230]
Length = 137
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 12 GMKPQLLVEASKATGSVQFYEIAFGAVEISRNME-----------TKRKAEQELNSRLPK 60
G+ P L + KA ++ FY AFGA E SR++E T LN P+
Sbjct: 10 GVTPHLTIADGKAADAIAFYTTAFGATEQSRHLEEGGARIMHAHLTVNDGGLMLNDHFPE 69
Query: 61 DCNTTLAQ 68
C A+
Sbjct: 70 MCGGAPAE 77
>gi|398385322|ref|ZP_10543345.1| hypothetical protein PMI04_03052 [Sphingobium sp. AP49]
gi|397720666|gb|EJK81220.1| hypothetical protein PMI04_03052 [Sphingobium sp. AP49]
Length = 137
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 11/68 (16%)
Query: 12 GMKPQLLVEASKATGSVQFYEIAFGAVEISRNME-----------TKRKAEQELNSRLPK 60
G+ P L + KA ++ FY AFGA E SR+M+ T LN P+
Sbjct: 10 GVTPHLTIADGKAADAIAFYTAAFGATEQSRHMDDAGTRIMHAHLTVNDGGLMLNDHFPE 69
Query: 61 DCNTTLAQ 68
C A
Sbjct: 70 MCGGAPAD 77
>gi|381202513|ref|ZP_09909627.1| glyoxalase/bleomycin resistance protein/dioxygenase [Sphingobium
yanoikuyae XLDN2-5]
Length = 137
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 12 GMKPQLLVEASKATGSVQFYEIAFGAVEISRNME-----------TKRKAEQELNSRLPK 60
G+ P L + KA ++ FY AFGA E SR++E T LN P+
Sbjct: 10 GVTPHLTIADGKAADAIAFYTAAFGATEQSRHLEEDGTRIMHAHLTVNDGGLMLNDHFPE 69
Query: 61 DCNTTLAQ 68
C A+
Sbjct: 70 MCGGAPAE 77
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.125 0.334
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 848,554,008
Number of Sequences: 23463169
Number of extensions: 20827273
Number of successful extensions: 43542
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43521
Number of HSP's gapped (non-prelim): 21
length of query: 71
length of database: 8,064,228,071
effective HSP length: 43
effective length of query: 28
effective length of database: 7,055,311,804
effective search space: 197548730512
effective search space used: 197548730512
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)